BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009119
         (543 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224114980|ref|XP_002316909.1| predicted protein [Populus trichocarpa]
 gi|222859974|gb|EEE97521.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/541 (77%), Positives = 470/541 (86%), Gaps = 5/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAAR+SGSLNLSNRSL +VP+EVYK  D  GEG+KWWE V+LQKLILAHNNIE +
Sbjct: 1   MDRVLKAARSSGSLNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAI 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDL+NL  LTVLNVSHNKLS LPAAIGEL MLK LDVSFN I K+PDEIGSAT+LVKFD
Sbjct: 61  KEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQKVPDEIGSATSLVKFD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSNQL+ELPSSLG CL LSD KASNN ITSLPEDLA CSK++K+DVEGNKL VLS NL+
Sbjct: 121 CSSNQLRELPSSLGGCLALSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLM 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTE  ASKNLL+ +P+  GSLSRLIRLDLHQNRI +IP SI GCCSLAEFYMGNN
Sbjct: 181 ASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           ALS LPAE+G LS+LGTLDLHSNQLKE   EAC+L+LS+LDLSNNSL+GLPPE+GKMTTL
Sbjct: 241 ALSTLPAEIGALSRLGTLDLHSNQLKEIPAEACKLQLSMLDLSNNSLTGLPPELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLL GNPLRTLRSSLV+GPT  LL YLRSRL E EDS+A+T  K+DLI+M  RLSV+S
Sbjct: 301 RKLLLNGNPLRTLRSSLVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSL+G+ LSA+PSE+WE+ EI K+DLSRNSIQELP ELS C     LILSRNKI DWP
Sbjct: 361 KELSLQGLGLSAVPSEVWESNEIVKVDLSRNSIQELPLELSLCC----LILSRNKISDWP 416

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNN L Q+PSDGF+ +PMLQILDLS N ASL  +P FSSLPHL+E
Sbjct: 417 CAILKSLPNLICLKLDNNALTQIPSDGFQAVPMLQILDLSGNPASLLGHPAFSSLPHLKE 476

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYLR++QLRE P+DIL LQQL+IL+LSQNSL SIPEG KNLTSLTELDLSDNNISALPPE
Sbjct: 477 LYLRQVQLREIPSDILSLQQLQILNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPE 536

Query: 540 L 540
           L
Sbjct: 537 L 537



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 173/390 (44%), Gaps = 107/390 (27%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N +  + ++  +L  L  L++  N++S +P +I     L    +  N++  +P EIG+
Sbjct: 192 SKNLLSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEIGA 251

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            + L   D  SNQLKE+P+   + L LS    SNN +T LP +L   + + KL + GN L
Sbjct: 252 LSRLGTLDLHSNQLKEIPAEACK-LQLSMLDLSNNSLTGLPPELGKMTTLRKLLLNGNPL 310

Query: 173 TVLSNNLIA--SWTMLTEL----------------------------IASKNL------L 196
             L ++L++  + T+L  L                            ++SK L      L
Sbjct: 311 RTLRSSLVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSSKELSLQGLGL 370

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC--------------------SLAEFY 236
           + +P  +   + ++++DL +N I  +P  +S CC                    +L    
Sbjct: 371 SAVPSEVWESNEIVKVDLSRNSIQELPLELSLCCLILSRNKISDWPCAILKSLPNLICLK 430

Query: 237 MGNNALSALPAE-LGKLSKLGTLDLHSN--------------QLKEYCVEACQLR----- 276
           + NNAL+ +P++    +  L  LDL  N               LKE  +   QLR     
Sbjct: 431 LDNNALTQIPSDGFQAVPMLQILDLSGNPASLLGHPAFSSLPHLKELYLRQVQLREIPSD 490

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLT 306
                                        L+ LDLS+N++S LPPE+G +  +L+ L L 
Sbjct: 491 ILSLQQLQILNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 550

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           GNPLR++R ++++  T A+LKYL  ++PE+
Sbjct: 551 GNPLRSIRRTILDRGTKAVLKYLMDKIPEH 580



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 146/314 (46%), Gaps = 44/314 (14%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L +  + +N + A+  +L  LS+L  L++  N+L        +L  L +LD+S N +  +
Sbjct: 47  LQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQKV 106

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG  T+L K   + N LR L SSL  G   AL     S L  + +S  ++  EDL  
Sbjct: 107 PDEIGSATSLVKFDCSSNQLRELPSSL--GGCLAL-----SDLKASNNS-ITSLPEDLAR 158

Query: 351 MA--TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
            +  T++ V   +L +   NL A     W    +T+ + S+N + ++P    S + L  L
Sbjct: 159 CSKLTKVDVEGNKLKVLSGNLMAS----WTM--LTEFNASKNLLSDIPDNFGSLSRLIRL 212

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L +N+I   P +I+    SL+   + NN L  +P++                       
Sbjct: 213 DLHQNRISTIPPSIM-GCCSLAEFYMGNNALSTLPAE----------------------- 248

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
               +L  L  L L   QL+E P +  +LQ L +LDLS NSL  +P     +T+L +L L
Sbjct: 249 --IGALSRLGTLDLHSNQLKEIPAEACKLQ-LSMLDLSNNSLTGLPPELGKMTTLRKLLL 305

Query: 529 SDNNISALPPELVS 542
           + N +  L   LVS
Sbjct: 306 NGNPLRTLRSSLVS 319



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 44/210 (20%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D +  A R   +S  L+L   +LS +P E+             WE  E+ KL L+ N+I+
Sbjct: 2   DRVLKAAR---SSGSLNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            +  +L + + L  L +S NK+   P AI                          ++PML
Sbjct: 59  AIKEDLKNLSQLTVLNVSHNKLSALPAAI-------------------------GELPML 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           ++LD+S+N I  +P+     S   L +      QLRE P+ +     L  L  S NS+ S
Sbjct: 94  KLLDVSFNLIQKVPDE--IGSATSLVKFDCSSNQLRELPSSLGGCLALSDLKASNNSITS 151

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +PE     + LT++D+  N +  L   L++
Sbjct: 152 LPEDLARCSKLTKVDVEGNKLKVLSGNLMA 181



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L   N+ AI  ++    ++T L++S N +  LP  +     L+ L +S N I+
Sbjct: 45  VELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQ 104

Query: 417 DWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
             PD I   TSL    C    +N LR++PS     + +  +   + +I SLPE+   +  
Sbjct: 105 KVPDEIGSATSLVKFDC---SSNQLRELPSSLGGCLALSDLKASNNSITSLPED--LARC 159

Query: 475 PHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
             L ++ +   +L+    +++     L   + S+N L  IP+ F +L+ L  LDL  N I
Sbjct: 160 SKLTKVDVEGNKLKVLSGNLMASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRI 219

Query: 534 SALPPELV 541
           S +PP ++
Sbjct: 220 STIPPSIM 227


>gi|255575336|ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/541 (76%), Positives = 475/541 (87%), Gaps = 2/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAARTSGSLNLSNRSLR + +EVY++ D AGEG+KWWE V+LQKLILAHN+IE L
Sbjct: 1   MDRVLKAARTSGSLNLSNRSLRQL-HEVYRSSDAAGEGEKWWETVELQKLILAHNSIESL 59

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDLR LP LTVLNVS+NKL+ LPAAIGEL +LKSLDVSFN I  +PDEIGSAT+LVKFD
Sbjct: 60  KEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDEIGSATSLVKFD 119

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSNQLKELP S+GRCL+LS+ K SNN ITS PEDLA C K++K+DVEGNKL   S NL+
Sbjct: 120 CSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQTFSENLM 179

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTEL ASKNLL  +P+ +GSLSRLIRLD HQN+I SIP SI GCCSL EFYMGNN
Sbjct: 180 ASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNN 239

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS LPAE+G++S+L TLDLHSNQLKE+ VE C+L LSVLDLSNNSLSGLP EIG+MTTL
Sbjct: 240 LLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCKLHLSVLDLSNNSLSGLPLEIGRMTTL 299

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLLTGNPLRT+RSSLV+GPTPALL+YLRSRL E EDSEA+T  ++D+I MA+RLS+++
Sbjct: 300 RKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRKDVIAMASRLSIST 359

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL L G+ LSA+PSE+WE+GEI K+DLS+NSIQ+LP ELSSC SLQTLILS+NKI++WP
Sbjct: 360 KELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWP 419

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SLS+LSCLKLDNNPLRQ+P DGF+ + MLQILDLS N AS+ E PPFS LPHLQE
Sbjct: 420 GAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPASVCELPPFSKLPHLQE 479

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYLR +QL E P+DIL L QLRILDLS+NSLQSIPEGFK+LTSLTELDLSDN+I+ALPPE
Sbjct: 480 LYLRHVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPE 539

Query: 540 L 540
           L
Sbjct: 540 L 540



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 217/480 (45%), Gaps = 65/480 (13%)

Query: 13  SLNLSNRSLRDVPNEVYK-----NFDEAGEGDK-----WWEAVDLQKLILAHNNIEKLKE 62
           SL++S   ++ VP+E+        FD +    K         +DL +L +++N I    E
Sbjct: 94  SLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPE 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           DL     LT ++V  NKL       +    ML  L+ S N +  IPD +GS + L++ D 
Sbjct: 154 DLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDF 213

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N++  +P S+  C +L +F   NN +++LP ++ + S+++ LD+  N+L      +  
Sbjct: 214 HQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFP--VEG 271

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISG------------ 228
               L+ L  S N L+G+P  IG ++ L +L L  N + +I SS +SG            
Sbjct: 272 CKLHLSVLDLSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSR 331

Query: 229 ------------------------CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
                                     S  E ++    LSA+P+E+ +  ++  +DL  N 
Sbjct: 332 LSEGEDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNS 391

Query: 265 LKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGP 321
           +++  VE  +C + L  L LS N +   P  I K ++ L  L L  NPLR +       P
Sbjct: 392 IQKLPVELSSC-VSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQI-------P 443

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                     ++ +   + AS  +    +    L    +EL L  + L  +PS+I    +
Sbjct: 444 LDGFQAVSMLQILDLSGNPASVCELPPFSKLPHL----QELYLRHVQLHEVPSDILSLLQ 499

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDLSRNS+Q +P    S  SL  L LS N I   P  +     SL  L+LD NPLR+
Sbjct: 500 LRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPELGFLEPSLQALRLDGNPLRR 559



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 166/397 (41%), Gaps = 81/397 (20%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +LI + N +  + E +  L +L  L++  N++ ++P++I     L    +  N +  +
Sbjct: 46  LQKLILAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTV 105

Query: 246 PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P E+G  + L   D  SNQLKE    V  C L LS L +SNN ++  P ++ K   L K+
Sbjct: 106 PDEIGSATSLVKFDCSSNQLKELPGSVGRC-LDLSELKVSNNLITSFPEDLAKCLKLTKV 164

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            + GN L+T   +L+                               TM T L+  SK L 
Sbjct: 165 DVEGNKLQTFSENLMAS----------------------------WTMLTELN-ASKNL- 194

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
                L+ IP  +     + +LD  +N I  +PP +  C SL    +  N +   P A +
Sbjct: 195 -----LTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNNLLSTLP-AEI 248

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             +S L+ L L +N L++ P +G K    L +LDLS N ++ LP       +  L++L L
Sbjct: 249 GEVSRLATLDLHSNQLKEFPVEGCK--LHLSVLDLSNNSLSGLPLE--IGRMTTLRKLLL 304

Query: 483 R-------RMQLREAPT-DILRLQQLRI-----------------------------LDL 505
                   R  L   PT  +LR  + R+                             L L
Sbjct: 305 TGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRKDVIAMASRLSISTKELFL 364

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
               L ++P        + ++DLS N+I  LP EL S
Sbjct: 365 VGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSS 401



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 2/175 (1%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A+P+ I E   +  LD+S N IQ +P E+ S  SL     S N++K+ P ++   L  
Sbjct: 79  LTALPAAIGELSLLKSLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKELPGSVGRCLD- 137

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           LS LK+ NN +   P D  K + + ++      + +  EN   +S   L EL   +  L 
Sbjct: 138 LSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQTFSENL-MASWTMLTELNASKNLLT 196

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             P ++  L +L  LD  QN + SIP   K   SL E  + +N +S LP E+  V
Sbjct: 197 CIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEV 251


>gi|359493861|ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera]
 gi|302143032|emb|CBI20327.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/541 (77%), Positives = 480/541 (88%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R LKAAR SGSLNLSNR+LR+VP+EVY++ D  GEG+KWWEAV+LQKLILAHN+IE L
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL LL+VLN+S+NKL  LPAAIGEL MLKSLD+S NSI+ IP+ IGSAT+LVK D
Sbjct: 61  REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+LK+LP+SLGRC NL + KASNNCITSLPEDLA C K+ KLDVEGNKLT+LS N+I
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP+SI GCCSLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLSNNSLSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT-KEDLITMATRLSVTS 359
           RKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +EDSEA+TT KE+++TMA R+S+TS
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKENVVTMAARISITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPEL+SC SLQ LILSRNKI++WP
Sbjct: 361 KELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQALILSRNKIQEWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             IL SL +LSCLKLDNNPLRQ+P+DGF+ +  LQILDLS N ASLP+NP FSSLP LQE
Sbjct: 421 GVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLPDNPAFSSLPQLQE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYLRRMQL E P+DIL LQQL+ILDLSQNSLQ IPEGFKNLTSLTEL+LSDN+I+ LPPE
Sbjct: 481 LYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTELNLSDNSIATLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 193/477 (40%), Gaps = 145/477 (30%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILA 53
           ++ +A +   L+ SN  L+D+PN + +  N  E            +     + L KL + 
Sbjct: 109 VIGSATSLVKLDCSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVE 168

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD---- 108
            N +  L E++  +  LLT LN S N L+ LP  IG L  L  LD   N I  IP     
Sbjct: 169 GNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKG 228

Query: 109 -------------------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
                              EIG+ + L   D  SNQLKE P    + L L     SNN +
Sbjct: 229 CCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACK-LRLQVLDLSNNSL 287

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS--------------------------- 182
           + LP ++   + + KL + GN L  L ++L++                            
Sbjct: 288 SGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKE 347

Query: 183 --WTMLTEL-IASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
              TM   + I SK L      L+ +P  +   S ++++DL +N I  +P  ++ C SL 
Sbjct: 348 NVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQ 407

Query: 234 EFYMG------------------------NNALSALPAE-LGKLSKLGTLDLHSN----- 263
              +                         NN L  +PA+    +SKL  LDL  N     
Sbjct: 408 ALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLP 467

Query: 264 ---------QLKEYCVEACQL-----------RLSVLDLSNNSL---------------- 287
                    QL+E  +   QL           +L +LDLS NSL                
Sbjct: 468 DNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTEL 527

Query: 288 -------SGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
                  + LPPE+G +  +L+ L L GNPLR++R ++++  T A+LKYL+ ++PE+
Sbjct: 528 NLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEH 584



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 63/302 (20%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LPA +G+L  L +LDL  N + +   V      L  LD SNN L  LP  +G+ + L
Sbjct: 80  LVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLDCSNNKLKDLPNSLGRCSNL 139

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L  + N + +L   L +      LK ++  +   E ++ +   E++I     L+    
Sbjct: 140 LELKASNNCITSLPEDLAH-----CLKLIKLDV---EGNKLTMLSENMIASWVLLT---- 187

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL+     L+ +P  I     + +LD  +N I  +P  +  C SL    +  N       
Sbjct: 188 ELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN------- 240

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            +L+SL++                     + +L  LDL  N                   
Sbjct: 241 -VLSSLTA-----------------EIGALSLLGTLDLHSN------------------- 263

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                QL+E P +  +L+ L++LDLS NSL  +P     +T+L +L L+ N +  L   L
Sbjct: 264 -----QLKEYPVEACKLR-LQVLDLSNNSLSGLPPEIGMMTTLRKLVLTGNPLRTLRSSL 317

Query: 541 VS 542
           VS
Sbjct: 318 VS 319


>gi|225461397|ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/545 (75%), Positives = 477/545 (87%), Gaps = 5/545 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R LKAAR SGSLNLSNR+LR+VP+EVY++ D  GEG+KWWEAV+LQKLILAHN+IE L
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL LL+VLN+S+NKL  LPAAIGEL MLKSLD+S NSI+ IP+ IGSAT+LVK D
Sbjct: 61  REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+LK+LP+SLGRC NL + KASNNCITSLPEDLA C K+ KLDVEGNKLT+LS N+I
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP+SI GCCSLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLSNNSLSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED-----SEASTTKEDLITMATRL 355
           RKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +E      + A+T KE+++TMA R+
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFFTSATTAKENVVTMAARI 360

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           S+TSKELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPEL+SC SLQ LILSRNKI
Sbjct: 361 SITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQALILSRNKI 420

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++WP  IL SL +LSCLKLDNNPLRQ+P+DGF+ +  LQILDLS N ASLP+NP FSSLP
Sbjct: 421 QEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLPDNPAFSSLP 480

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQELYLRRMQL E P+DIL LQQL+ILDLSQNSLQ IPEGFKNLTSLTEL+LSDN+I+ 
Sbjct: 481 QLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTELNLSDNSIAT 540

Query: 536 LPPEL 540
           LPPEL
Sbjct: 541 LPPEL 545



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 193/481 (40%), Gaps = 149/481 (30%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILA 53
           ++ +A +   L+ SN  L+D+PN + +  N  E            +     + L KL + 
Sbjct: 109 VIGSATSLVKLDCSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVE 168

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD---- 108
            N +  L E++  +  LLT LN S N L+ LP  IG L  L  LD   N I  IP     
Sbjct: 169 GNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKG 228

Query: 109 -------------------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
                              EIG+ + L   D  SNQLKE P    + L L     SNN +
Sbjct: 229 CCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACK-LRLQVLDLSNNSL 287

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS--------------------------- 182
           + LP ++   + + KL + GN L  L ++L++                            
Sbjct: 288 SGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFFTSAT 347

Query: 183 ------WTMLTEL-IASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                  TM   + I SK L      L+ +P  +   S ++++DL +N I  +P  ++ C
Sbjct: 348 TAKENVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSC 407

Query: 230 CSLAEFYMG------------------------NNALSALPAE-LGKLSKLGTLDLHSN- 263
            SL    +                         NN L  +PA+    +SKL  LDL  N 
Sbjct: 408 VSLQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNS 467

Query: 264 -------------QLKEYCVEACQL-----------RLSVLDLSNNSL------------ 287
                        QL+E  +   QL           +L +LDLS NSL            
Sbjct: 468 ASLPDNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTS 527

Query: 288 -----------SGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
                      + LPPE+G +  +L+ L L GNPLR++R ++++  T A+LKYL+ ++PE
Sbjct: 528 LTELNLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 587

Query: 336 N 336
           +
Sbjct: 588 H 588



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 63/302 (20%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LPA +G+L  L +LDL  N + +   V      L  LD SNN L  LP  +G+ + L
Sbjct: 80  LVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLDCSNNKLKDLPNSLGRCSNL 139

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L  + N + +L   L +      LK ++  +   E ++ +   E++I     L+    
Sbjct: 140 LELKASNNCITSLPEDLAH-----CLKLIKLDV---EGNKLTMLSENMIASWVLLT---- 187

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL+     L+ +P  I     + +LD  +N I  +P  +  C SL    +  N       
Sbjct: 188 ELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN------- 240

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            +L+SL++                     + +L  LDL  N                   
Sbjct: 241 -VLSSLTA-----------------EIGALSLLGTLDLHSN------------------- 263

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                QL+E P +  +L+ L++LDLS NSL  +P     +T+L +L L+ N +  L   L
Sbjct: 264 -----QLKEYPVEACKLR-LQVLDLSNNSLSGLPPEIGMMTTLRKLVLTGNPLRTLRSSL 317

Query: 541 VS 542
           VS
Sbjct: 318 VS 319


>gi|356549743|ref|XP_003543250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 583

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/540 (76%), Positives = 475/540 (87%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAAR SGSLNLSNRSL ++P+EVY+N +  G  DKWWEA +LQKLILAHN+I  L
Sbjct: 1   MDRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDLRNLP L+VLN+SHN LS+LPAAIGEL  LK LDVSFNSI+KIP+EIGSA +LVK D
Sbjct: 61  KEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEEIGSAVSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+L ELPSSLGRCL LSD K SNN IT+LPEDLA+CSK+SKLD+EGN+LTV+S NLI
Sbjct: 121 CSNNRLTELPSSLGRCLELSDLKGSNNLITNLPEDLANCSKLSKLDMEGNRLTVMSENLI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +SWTMLTE  +SKNLLNG+P +IG LSRLIRLDLHQNRI +IPSSI GC SL E Y+GNN
Sbjct: 181 SSWTMLTEFNSSKNLLNGIPTSIGGLSRLIRLDLHQNRISAIPSSIIGCHSLTELYLGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLDLSNNSLSGLPPE+GKMTTL
Sbjct: 241 NISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA TT +++ITMATRLS++SK
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVITMATRLSISSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           ELS+E + LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSSC SLQTLILS+N+IKDWP 
Sbjct: 361 ELSMEELGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKDWPG 420

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           +IL SLSSLSCLKLDNNPLRQ+PSDGF+ +P LQILDLS N ASL + P FSSLP+LQEL
Sbjct: 421 SILKSLSSLSCLKLDNNPLRQIPSDGFEMVPKLQILDLSGNAASLLDGPAFSSLPYLQEL 480

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YLRRM+L E P+DI+ L QLRILDLSQNSLQSIP G K LTSL ELDLS+NNI+ LPPEL
Sbjct: 481 YLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQELDLSNNNIAVLPPEL 540



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 183/388 (47%), Gaps = 51/388 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N++S +P++I   H L  L +  N+I  +P EIG+ + L   D  SNQLK+ 
Sbjct: 209 LIRLDLHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDY 268

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-MLTE 188
           P    + L+L     SNN ++ LP ++   + + KL + GN +  L ++L++  T  L +
Sbjct: 269 PVEACK-LSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLK 327

Query: 189 LIASK-------NLLNGMPETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYM 237
            + S+         +    E I   +RL      L + +  + ++PS +     + +  +
Sbjct: 328 FLRSRLSEDEDSEAVTTTKEVITMATRLSISSKELSMEELGLSAVPSEVWESGEVIKLNL 387

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIG 295
             N++  LP EL     L TL L  NQ+K++   +      LS L L NN L  +P +  
Sbjct: 388 SRNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQIPSDGF 447

Query: 296 KMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           +M   L+ L L+GN      +SL++GP  + L YL                         
Sbjct: 448 EMVPKLQILDLSGNA-----ASLLDGPAFSSLPYL------------------------- 477

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                +EL L  M LS +PS+I    ++  LDLS+NS+Q +P  L +  SLQ L LS N 
Sbjct: 478 -----QELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQELDLSNNN 532

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           I   P  +     SL  L+LD NPLR +
Sbjct: 533 IAVLPPELGLLEPSLQALRLDGNPLRSI 560



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 157/351 (44%), Gaps = 51/351 (14%)

Query: 12  GSLNLSNRSLRDVPNEVYK---------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           G+L+L +  L+D P E  K         N   +G   +  +   L+KL+L+ N +  L+ 
Sbjct: 256 GTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRS 315

Query: 63  DLRNLPLLTVLNVSHNKLSE------LPAAIGELHMLKSLDVSFN-------SIMKIPDE 109
            L + P   +L    ++LSE      +      + M   L +S          +  +P E
Sbjct: 316 SLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVITMATRLSISSKELSMEELGLSAVPSE 375

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +  +  ++K + S N ++ELP  L  C++L     S N I   P  +             
Sbjct: 376 VWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLD 435

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQN--RILSIPSSI 226
           N                       N L  +P +    + +L  LDL  N   +L  P+  
Sbjct: 436 N-----------------------NPLRQIPSDGFEMVPKLQILDLSGNAASLLDGPA-F 471

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           S    L E Y+    LS +P+++  L +L  LDL  N L+   V    L  L  LDLSNN
Sbjct: 472 SSLPYLQELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQELDLSNN 531

Query: 286 SLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +++ LPPE+G +  +L+ L L GNPLR++R ++++  T A+L+YL+ +LPE
Sbjct: 532 NIAVLPPELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLQYLKDKLPE 582



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 140/337 (41%), Gaps = 63/337 (18%)

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           + L +L L  N I S+   +     L+   + +N+LS LPA +G+L +L  LD+  N + 
Sbjct: 45  AELQKLILAHNSIASLKEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIV 104

Query: 267 EYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +   E    + L  LD SNN L+ LP  +G+   L  L  + N +  L   L N    + 
Sbjct: 105 KIPEEIGSAVSLVKLDCSNNRLTELPSSLGRCLELSDLKGSNNLITNLPEDLANCSKLSK 164

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL        +   E+LI+  T L+  +   +L    L+ IP+ I     + +L
Sbjct: 165 LDMEGNRL--------TVMSENLISSWTMLTEFNSSKNL----LNGIPTSIGGLSRLIRL 212

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           DL +N I  +P  +  C SL  L L  N                                
Sbjct: 213 DLHQNRISAIPSSIIGCHSLTELYLGNN-------------------------------- 240

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                          NI++LP      +L  L  L L   QL++ P +  +L  L +LDL
Sbjct: 241 ---------------NISTLPVE--IGALSRLGTLDLHSNQLKDYPVEACKLSLL-VLDL 282

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           S NSL  +P     +T+L +L LS N +  L   LVS
Sbjct: 283 SNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVS 319



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 44/210 (20%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R    S  L+L   +L+ IP E+             WEA E+ KL L+ NSI 
Sbjct: 2   DRILKAAR---ASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIA 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L            RN            L  LS L L +N L Q+P+    ++P L
Sbjct: 59  SLKEDL------------RN------------LPFLSVLNLSHNSLSQLPA-AIGELPQL 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           ++LD+S+N I  +PE     S   L +L     +L E P+ + R  +L  L  S N + +
Sbjct: 94  KMLDVSFNSIVKIPEE--IGSAVSLVKLDCSNNRLTELPSSLGRCLELSDLKGSNNLITN 151

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +PE   N + L++LD+  N ++ +   L+S
Sbjct: 152 LPEDLANCSKLSKLDMEGNRLTVMSENLIS 181


>gi|449431828|ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449478165|ref|XP_004155239.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 583

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/534 (75%), Positives = 461/534 (86%), Gaps = 1/534 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAAR SGSLNLSNRSL DVP+EVY++ D     +KWWEAV+LQKLILAHNNI+ L
Sbjct: 1   MDRILKAARASGSLNLSNRSLSDVPSEVYRSLDAVQADEKWWEAVELQKLILAHNNIQLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E+LRNL  L VLNVSHNKLSELPAAIGEL  LK LDVSFNS+M+IPDEIGSAT+LVKFD
Sbjct: 61  SEELRNLSSLAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLMRIPDEIGSATSLVKFD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN L+ELP  LGRC +LSD KASNN I+SLP +LA+CSK++KLD+EGNKL V+S NLI
Sbjct: 121 CSSNHLQELPGGLGRCSDLSDLKASNNSISSLPVELANCSKLTKLDMEGNKLKVISKNLI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWT+LTEL ASKNLLN +PE IGSL RLIRL++ QN+I SIP SI  CC+LAE YMGNN
Sbjct: 181 ASWTLLTELNASKNLLNELPENIGSLLRLIRLNVFQNKISSIPPSIKDCCALAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           ++S LP E+G LS LGTLDLHSNQLKEY VEAC+L L VLDLSNNSLSGLPPEIGKMTTL
Sbjct: 241 SVSTLPVEIGALSHLGTLDLHSNQLKEYPVEACKLHLLVLDLSNNSLSGLPPEIGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-DLITMATRLSVTS 359
           RKLLLTGNP+RTLRSSLV+GPTPALL++LRSRLPENE  EAS+T+  D+ITMA R+S+TS
Sbjct: 301 RKLLLTGNPIRTLRSSLVSGPTPALLRFLRSRLPENEGPEASSTQRGDVITMAARMSITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG  LSA+PSE+WE+ E+ KLDLS+NS QELP ELSSC SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCTSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL +L +L+CLKLDNNPL+Q+PSDGF+ +  LQ+LDLS NIA LPE+P FSSLP LQE
Sbjct: 421 GAILKTLPNLTCLKLDNNPLKQIPSDGFQAVSKLQVLDLSGNIACLPEHPTFSSLPLLQE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           LYLRRM+L E P+ IL L+ +RILDLSQNS+Q +PE  KNL +LTELDLSDNNI
Sbjct: 481 LYLRRMRLHEVPSSILGLKHMRILDLSQNSIQLVPEELKNLAALTELDLSDNNI 534



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 192/411 (46%), Gaps = 50/411 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L  + N + +L E++ +L  L  LNV  NK+S +P +I +   L  L +  NS+  +
Sbjct: 186 LTELNASKNLLNELPENIGSLLRLIRLNVFQNKISSIPPSIKDCCALAELYMGNNSVSTL 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+ + L   D  SNQLKE P    + L+L     SNN ++ LP ++   + + KL 
Sbjct: 246 PVEIGALSHLGTLDLHSNQLKEYPVEACK-LHLLVLDLSNNSLSGLPPEIGKMTTLRKLL 304

Query: 167 VEGNKLTVLSNNLIASWT-MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + GN +  L ++L++  T  L   + S+   N  PE   +          +  ++++ + 
Sbjct: 305 LTGNPIRTLRSSLVSGPTPALLRFLRSRLPENEGPEASST---------QRGDVITMAAR 355

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLS 283
           +S   +  E  +    LSA+P+E+ + S+L  LDL  N  +E  VE  +C   L  L LS
Sbjct: 356 MS--ITSKELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCT-SLQTLILS 412

Query: 284 NNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            N +   P  I K +  L  L L  NPL+ + S                      D   +
Sbjct: 413 RNKIKDWPGAILKTLPNLTCLKLDNNPLKQIPS----------------------DGFQA 450

Query: 343 TTKEDLITMATRLSVTS-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            +K  ++ ++  ++              +EL L  M L  +PS I     +  LDLS+NS
Sbjct: 451 VSKLQVLDLSGNIACLPEHPTFSSLPLLQELYLRRMRLHEVPSSILGLKHMRILDLSQNS 510

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           IQ +P EL + A+L  L LS N I   P  +     SL  L+LD NPLR +
Sbjct: 511 IQLVPEELKNLAALTELDLSDNNISLLPPQLSLLEPSLQVLRLDGNPLRSI 561



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 189/451 (41%), Gaps = 71/451 (15%)

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           + +A A    + S+  L ++PS + R L+               E   +  ++ KL +  
Sbjct: 5   LKAARASGSLNLSNRSLSDVPSEVYRSLD----------AVQADEKWWEAVELQKLILAH 54

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N + +LS  L  + + L  L  S N L+ +P  IG L  L  LD+  N ++ IP  I   
Sbjct: 55  NNIQLLSEEL-RNLSSLAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLMRIPDEIGSA 113

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG 289
            SL +F   +N L  LP  LG+ S L                      S L  SNNS+S 
Sbjct: 114 TSLVKFDCSSNHLQELPGGLGRCSDL----------------------SDLKASNNSISS 151

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL------KYLRSRLPENEDSEAST 343
           LP E+   + L KL + GN L+ +  +L+   T  LL      K L + LPEN  S    
Sbjct: 152 LPVELANCSKLTKLDMEGNKLKVISKNLIASWT--LLTELNASKNLLNELPENIGS---- 205

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                +    RL+V   ++S       +IP  I +   + +L +  NS+  LP E+ + +
Sbjct: 206 -----LLRLIRLNVFQNKIS-------SIPPSIKDCCALAELYMGNNSVSTLPVEIGALS 253

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
            L TL L  N++K++P  +      L  L L NN L  +P +  K   + ++L     I 
Sbjct: 254 HLGTLDLHSNQLKEYP--VEACKLHLLVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPIR 311

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPT-------DILRLQQL-----RILDLSQNSLQ 511
           +L  +      P L      R+   E P        D++ +        + L L    L 
Sbjct: 312 TLRSSLVSGPTPALLRFLRSRLPENEGPEASSTQRGDVITMAARMSITSKELSLEGQGLS 371

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           ++P      + L +LDLS N+   LP EL S
Sbjct: 372 AVPSEVWESSELMKLDLSKNSFQELPVELSS 402



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 44/210 (20%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R    S  L+L   +LS +PSE+             WEA E+ KL L+ N+IQ
Sbjct: 2   DRILKAAR---ASGSLNLSNRSLSDVPSEVYRSLDAVQADEKWWEAVELQKLILAHNNIQ 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  EL + +SL  L +S NK+ + P AI                          ++P L
Sbjct: 59  LLSEELRNLSSLAVLNVSHNKLSELPAAI-------------------------GELPAL 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           ++LD+S+N +  +P+     S   L +       L+E P  + R   L  L  S NS+ S
Sbjct: 94  KLLDVSFNSLMRIPDE--IGSATSLVKFDCSSNHLQELPGGLGRCSDLSDLKASNNSISS 151

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +P    N + LT+LD+  N +  +   L++
Sbjct: 152 LPVELANCSKLTKLDMEGNKLKVISKNLIA 181


>gi|356544024|ref|XP_003540456.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 586

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/536 (76%), Positives = 470/536 (87%), Gaps = 1/536 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD-KWWEAVDLQKLILAHNNIEK 59
           MDR+LKAAR SGSLNLSNRSL ++P+EVY+N +  G GD KWWEAV+LQKLILAHN+I  
Sbjct: 1   MDRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIAS 60

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           LKEDLRNLP L VLN+SHN LS+LPAAIGEL  LK LDVSFNSI+ IP+EIGSA +LVK 
Sbjct: 61  LKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNIPEEIGSAMSLVKL 120

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           DCS+NQL ELPSSLGRCL LSD K SNN ITSLPEDLA+CSK+SKLD+EGNKLTV+S NL
Sbjct: 121 DCSNNQLTELPSSLGRCLELSDLKGSNNLITSLPEDLANCSKLSKLDMEGNKLTVISENL 180

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I+SWTMLTE  ASKNLLNG+P +IG LSRLIR+ +HQNRI +IPSSI GC SL E Y+GN
Sbjct: 181 ISSWTMLTEFNASKNLLNGIPTSIGGLSRLIRVYVHQNRISAIPSSIIGCHSLTELYLGN 240

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLDLSNNSLSGLPPE+GKMTT
Sbjct: 241 NNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTT 300

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           LRKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA TT +++I MATRLS+TS
Sbjct: 301 LRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVIAMATRLSITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELS+EG+ LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSSC SLQTLILS+N+IK+WP
Sbjct: 361 KELSMEGLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKEWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            +IL SLSSLSCLKLDNNPL+Q+P DGF+ +P LQILDLS N ASL + P FSSLP+LQE
Sbjct: 421 GSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPKLQILDLSGNAASLLDVPAFSSLPYLQE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           LYLRRM+L E P+DI+ LQQLRILDLSQNSLQSIP G K+LTSL ELDLS+NNIS 
Sbjct: 481 LYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLKELDLSNNNISV 536



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 176/383 (45%), Gaps = 51/383 (13%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V  N++S +P++I   H L  L +  N+I  +P EIG+ + L   D  SNQLK+ P    
Sbjct: 215 VHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVEAC 274

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-MLTELIASK 193
           + L+L     SNN ++ LP ++   + + KL + GN +  L ++L++  T  L + + S+
Sbjct: 275 K-LSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSR 333

Query: 194 -------NLLNGMPETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                    +    E I   +RL      L +    + ++PS +     + +  +  N++
Sbjct: 334 LSEDEDSEAVTTTKEVIAMATRLSITSKELSMEGLGLSAVPSEVWESGEVIKLNLSRNSI 393

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-T 299
             LP EL     L TL L  NQ+KE+   +      LS L L NN L  +P +  ++   
Sbjct: 394 QELPVELSSCVSLQTLILSKNQIKEWPGSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPK 453

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L+GN      +SL++ P  + L YL                              
Sbjct: 454 LQILDLSGNA-----ASLLDVPAFSSLPYL------------------------------ 478

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL L  M LS +PS+I    ++  LDLS+NS+Q +P  L    SL+ L LS N I    
Sbjct: 479 QELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLKELDLSNNNISVLL 538

Query: 420 DAILTSLSSLSCLKLDNNPLRQV 442
             +     SL  L+LD NPLR +
Sbjct: 539 PELGLLEPSLQALRLDGNPLRSI 561



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 162/355 (45%), Gaps = 66/355 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L +NNI  L  ++  L  L  L++  N+L + P    +L +L  LD+S NS+  +
Sbjct: 233 LTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLL-VLDLSNNSLSGL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--GRCLNLSDFKAS-------NNCITSLPEDLA 157
           P E+G  T L K   S N ++ L SSL  G    L  F  S       +  +T+  E +A
Sbjct: 292 PPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVIA 351

Query: 158 DCSKMS----KLDVEGNKLTV---------------LSNNLI-------ASWTMLTELIA 191
             +++S    +L +EG  L+                LS N I       +S   L  LI 
Sbjct: 352 MATRLSITSKELSMEGLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQTLIL 411

Query: 192 SKNLLNGMP-------------------------ETIGSLSRLIRLDLHQN--RILSIPS 224
           SKN +   P                         +    + +L  LDL  N   +L +P+
Sbjct: 412 SKNQIKEWPGSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPKLQILDLSGNAASLLDVPA 471

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
             S    L E Y+    LS +P+++  L +L  LDL  N L+   V    L  L  LDLS
Sbjct: 472 -FSSLPYLQELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLKELDLS 530

Query: 284 NNSLS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           NN++S  LP       +L+ L L GNPLR++R ++++  T A+L+YL+ +LPE E
Sbjct: 531 NNNISVLLPELGLLEPSLQALRLDGNPLRSIRRTVLDRGTKAVLQYLKDKLPEQE 585



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 59/396 (14%)

Query: 167 VEGNKLTVLSNNLIASWT-------MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           VE  KL +L++N IAS          L  L  S N L+ +P  IG L +L  LD+  N I
Sbjct: 46  VELQKL-ILAHNSIASLKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSI 104

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
           ++IP  I    SL +    NN L+ LP+ LG+                 C+E     LS 
Sbjct: 105 VNIPEEIGSAMSLVKLDCSNNQLTELPSSLGR-----------------CLE-----LSD 142

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L  SNN ++ LP ++   + L KL + GN L  +  +L++  T                +
Sbjct: 143 LKGSNNLITSLPEDLANCSKLSKLDMEGNKLTVISENLISSWTML--------------T 188

Query: 340 EASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           E + +K  L  + T +   S+   + +    +SAIPS I     +T+L L  N+I  LP 
Sbjct: 189 EFNASKNLLNGIPTSIGGLSRLIRVYVHQNRISAIPSSIIGCHSLTELYLGNNNISTLPV 248

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+ + + L TL L  N++KD+P  +     SL  L L NN L  +P +  K   + ++L 
Sbjct: 249 EIGALSRLGTLDLHSNQLKDYP--VEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLL 306

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL-----------RILDLS 506
               + +L  +      P L +    R+   E    +   +++           + L + 
Sbjct: 307 SGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVIAMATRLSITSKELSME 366

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
              L ++P        + +L+LS N+I  LP EL S
Sbjct: 367 GLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSS 402



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 52/321 (16%)

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
              L +  + +N++++L  +L  L  L  L+L  N L +      +L +L +LD+S NS+
Sbjct: 45  AVELQKLILAHNSIASLKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSI 104

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             +P EIG   +L KL  + N L  L SSL              R  E  D + S    +
Sbjct: 105 VNIPEEIGSAMSLVKLDCSNNQLTELPSSL-------------GRCLELSDLKGSN---N 148

Query: 348 LIT-MATRLSVTSK--ELSLEGMNLSAIPSEI---WEAGEITKLDLSRNSIQELPPELSS 401
           LIT +   L+  SK  +L +EG  L+ I   +   W    +T+ + S+N +  +P  +  
Sbjct: 149 LITSLPEDLANCSKLSKLDMEGNKLTVISENLISSWTM--LTEFNASKNLLNGIPTSIGG 206

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            + L  + + +N+I   P +I+    SL+ L L NN                       N
Sbjct: 207 LSRLIRVYVHQNRISAIPSSII-GCHSLTELYLGNN-----------------------N 242

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           I++LP      +L  L  L L   QL++ P +  +L  L +LDLS NSL  +P     +T
Sbjct: 243 ISTLPVE--IGALSRLGTLDLHSNQLKDYPVEACKLS-LLVLDLSNNSLSGLPPEMGKMT 299

Query: 522 SLTELDLSDNNISALPPELVS 542
           +L +L LS N +  L   LVS
Sbjct: 300 TLRKLLLSGNPMRTLRSSLVS 320



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 42/200 (21%)

Query: 358 TSKELSLEGMNLSAIPSEI--------------WEAGEITKLDLSRNSIQELPPELSSCA 403
            S  L+L   +L+ IP E+              WEA E+ KL L+ NSI  L  +L +  
Sbjct: 10  ASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIASLKEDLRNLP 69

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
            L  L LS N +   P AI                          ++P L++LD+S+N I
Sbjct: 70  FLAVLNLSHNSLSQLPAAI-------------------------GELPQLKMLDVSFNSI 104

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
            ++PE     S   L +L     QL E P+ + R  +L  L  S N + S+PE   N + 
Sbjct: 105 VNIPEE--IGSAMSLVKLDCSNNQLTELPSSLGRCLELSDLKGSNNLITSLPEDLANCSK 162

Query: 523 LTELDLSDNNISALPPELVS 542
           L++LD+  N ++ +   L+S
Sbjct: 163 LSKLDMEGNKLTVISENLIS 182


>gi|30683597|ref|NP_188160.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|21703129|gb|AAM74505.1| AT3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|24111377|gb|AAN46812.1| At3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|332642149|gb|AEE75670.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/541 (72%), Positives = 457/541 (84%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS N  S  E+P F  LP L+E
Sbjct: 421 GAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S+NNIS+LPPE
Sbjct: 481 LYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 39/437 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLD 97
           D     +DL  L   +N I  L ED+ N   L+ L+V  NKL+ L    I    ML  L+
Sbjct: 131 DSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELN 190

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
              N +  +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ 
Sbjct: 191 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIG 250

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D S++  LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N
Sbjct: 251 DLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGN 308

Query: 218 RILSIPSSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCV 270
            + ++ SS+    + A      + LS       + P +   ++    + + S   KE  +
Sbjct: 309 PLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSL 365

Query: 271 EACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           E   L            ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++ 
Sbjct: 366 EGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILK 425

Query: 320 GPTPALLKYLRSRLPENEDS-EASTTKEDLITMATRLSVTS-------------KELSLE 365
              P L+       P N+   +       L  +   ++  S             +EL L 
Sbjct: 426 S-LPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLS 484

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
            + LS +P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  +   
Sbjct: 485 RIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLL 544

Query: 426 LSSLSCLKLDNNPLRQV 442
             +L  L+LD NPLR +
Sbjct: 545 EPTLEVLRLDGNPLRSI 561



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 269 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +    + L  LD S+N L  LP  IG+   L  L  T N + +L   +VN    + L 
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLD 166

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E ++ +   E+ I   T L+    EL+     L  +P  I     + +LDL
Sbjct: 167 V--------EGNKLTALSENHIASWTMLA----ELNACKNMLGVLPQNIGSLSRLIRLDL 214

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N I  +PP +  C+SL    L  N +   P  I                         
Sbjct: 215 HQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEI------------------------- 249

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            D+  L  LDL  N                        QL+E P    +L+ L  LDLS 
Sbjct: 250 GDLSRLGTLDLRSN------------------------QLKEYPVGACKLK-LSYLDLSN 284

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NSL  +     N+T+L +L L  N +  L   LV
Sbjct: 285 NSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLV 318



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 67/209 (32%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ KL L+ N I+
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S NK+   P AI                          ++  +
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAI-------------------------GELTAM 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD+S+N I+ LPE                  Q+  A +       L  LD S N L+ 
Sbjct: 94  KSLDVSFNSISELPE------------------QIGSAIS-------LVKLDCSSNRLKE 128

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELV 541
           +P+       L++L  ++N IS+LP ++V
Sbjct: 129 LPDSIGRCLDLSDLKATNNQISSLPEDMV 157



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 12/124 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D IL +  +   L L N  L+ VP++ ++             + +  E   +     LQ+
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVYQ------------CLETTGEGENWWEAVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     LT++  LD+S N+IS LP +
Sbjct: 50  LILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQ 109

Query: 540 LVSV 543
           + S 
Sbjct: 110 IGSA 113


>gi|297830120|ref|XP_002882942.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328782|gb|EFH59201.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/541 (72%), Positives = 458/541 (84%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+I  L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIAVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHN LS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFNSITELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+ KELP S+GRCL+LSD KASNN I+SLPED+ +CSK+SKLDVEGN+LT LS N I
Sbjct: 121 CSSNRFKELPESIGRCLDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTEL ASKN+L+G+P+ IGSLSRLIRLDLHQN+ILS+P SI  C SL EFY+G N
Sbjct: 181 ASWTMLTELNASKNMLSGLPQNIGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLSA+PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSAVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNNPL Q+P DGF+ +  L+ILDLS N  S  E+P F  LP LQE
Sbjct: 421 GAILKSLPNLVCLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL R+QL E P DIL L  L ILDL+QNSLQSIP+  KN+TSL  LD+S+NNIS+LPPE
Sbjct: 481 LYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDISNNNISSLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 201/430 (46%), Gaps = 37/430 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSI 103
           +DL  L  ++N I  L ED+ N   L+ L+V  N+L+ L    I    ML  L+ S N +
Sbjct: 137 LDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNASKNML 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ D S++ 
Sbjct: 197 SGLPQNIGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFYLGINSLSTLPAEIGDLSRLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N + ++ 
Sbjct: 257 TLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLR 314

Query: 224 SSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           SS+    + A      + LS       + P +   ++    + + S   KE  +E   L 
Sbjct: 315 SSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSLEGLNLS 371

Query: 276 ----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG-PTPA 324
                      ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++   P   
Sbjct: 372 AVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLV 431

Query: 325 LLKYLR---SRLPENEDSEASTTKE-DLITMATRLSVTSK--------ELSLEGMNLSAI 372
            LK      +++P +     S  +  DL   A       K        EL L  + LS +
Sbjct: 432 CLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQELYLSRIQLSEV 491

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  +     +L  L
Sbjct: 492 PEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDISNNNISSLPPELGLLEPTLEVL 551

Query: 433 KLDNNPLRQV 442
           +LD NPLR +
Sbjct: 552 RLDGNPLRSI 561



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 67/354 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  L  N++  L  ++ +L  L  L++  N+L E P    +L  L  LD+S NS+  +
Sbjct: 232 LVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-------------GRCLNLSDFKASN----NCI 149
             E+G+ T L K     N L+ L SSL              R  N  +  AS     N I
Sbjct: 291 HPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVI 350

Query: 150 TS--------------------LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            S                    +P ++ +  +++K+++  N +  L   L  S ++ T L
Sbjct: 351 ASAARMSISSKELSLEGLNLSAVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQT-L 409

Query: 190 IASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIP----SSISGC--------------- 229
           I S+N +   P  I  SL  L+ L L  N +  IP     ++SG                
Sbjct: 410 ILSRNKIKDWPGAILKSLPNLVCLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREH 469

Query: 230 ---C---SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
              C    L E Y+    LS +P ++  LS L  LDL+ N L+        +  L  LD+
Sbjct: 470 PKFCHLPQLQELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDI 529

Query: 283 SNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           SNN++S LPPE+G +  TL  L L GNPLR++R  ++   T A+L YL+ RLP+
Sbjct: 530 SNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRLPD 583



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 135/334 (40%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 47  LQKLILAHNDIAVLREDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFNSITEL 106

Query: 269 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +    + L  LD S+N    LP  IG+   L  L  + N + +L   +VN    + L 
Sbjct: 107 PEQIGSAISLVKLDCSSNRFKELPESIGRCLDLSDLKASNNQISSLPEDMVNCSKLSKLD 166

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RL        +   E+ I   T L+    EL+     LS +P  I     + +LDL
Sbjct: 167 VEGNRL--------TALSENHIASWTMLT----ELNASKNMLSGLPQNIGSLSRLIRLDL 214

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N I  +PP +  C+SL    L  N           SLS+L                  
Sbjct: 215 HQNKILSVPPSIGDCSSLVEFYLGIN-----------SLSTLPA---------------- 247

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                 +I DLS                 L  L LR  QL+E P    +L+ L  LDLS 
Sbjct: 248 ------EIGDLS----------------RLGTLDLRSNQLKEYPVGACKLK-LSYLDLSN 284

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NSL  +     N+T+L +L L  N +  L   LV
Sbjct: 285 NSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLV 318



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P E+             WEA ++ KL L+ N I 
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIA 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S N +   P AI   L+++  L +  N + ++P      I ++
Sbjct: 59  VLREDLKNLACLVVLNVSHNNLSQLPAAI-GELTAMKSLDVSFNSITELPEQIGSAISLV 117

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD S N    LPE+        L +L     Q+   P D++   +L  LD+  N L +
Sbjct: 118 K-LDCSSNRFKELPES--IGRCLDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTA 174

Query: 513 IPEG-FKNLTSLTELDLSDNNISALPPELVSV 543
           + E    + T LTEL+ S N +S LP  + S+
Sbjct: 175 LSENHIASWTMLTELNASKNMLSGLPQNIGSL 206



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     LQ+L L+   + ++ ED+ NL  L +L+++ N L  +P +I  +  LK L
Sbjct: 468 EHPKFCHLPQLQELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542


>gi|7021726|gb|AAF35407.1| unknown protein [Arabidopsis thaliana]
          Length = 562

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/541 (72%), Positives = 457/541 (84%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS N  S  E+P F  LP L+E
Sbjct: 421 GAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S+NNIS+LPPE
Sbjct: 481 LYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 200/435 (45%), Gaps = 37/435 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLD 97
           D     +DL  L   +N I  L ED+ N   L+ L+V  NKL+ L    I    ML  L+
Sbjct: 131 DSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELN 190

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
              N +  +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ 
Sbjct: 191 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIG 250

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D S++  LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N
Sbjct: 251 DLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGN 308

Query: 218 RILSIPSSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCV 270
            + ++ SS+    + A      + LS       + P +   ++    + + S   KE  +
Sbjct: 309 PLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSL 365

Query: 271 EACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           E   L            ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++ 
Sbjct: 366 EGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILK 425

Query: 320 G-PTPALLKYLRS---RLPENEDSEASTTKE-DLITMATRLSVTSK--------ELSLEG 366
             P    LK   +   ++P +     S  +  DL   A       K        EL L  
Sbjct: 426 SLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSR 485

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           + LS +P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  +    
Sbjct: 486 IQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLE 545

Query: 427 SSLSCLKLDNNPLRQ 441
            +L  L+LD NPLR+
Sbjct: 546 PTLEVLRLDGNPLRR 560



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 3/192 (1%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS-KLG 256
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L   L 
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEPTLE 549

Query: 257 TLDLHSNQLKEY 268
            L L  N L+ Y
Sbjct: 550 VLRLDGNPLRRY 561



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 269 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +    + L  LD S+N L  LP  IG+   L  L  T N + +L   +VN    + L 
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLD 166

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E ++ +   E+ I   T L+    EL+     L  +P  I     + +LDL
Sbjct: 167 V--------EGNKLTALSENHIASWTMLA----ELNACKNMLGVLPQNIGSLSRLIRLDL 214

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N I  +PP +  C+SL    L  N +   P  I                         
Sbjct: 215 HQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEI------------------------- 249

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            D+  L  LDL  N                        QL+E P    +L+ L  LDLS 
Sbjct: 250 GDLSRLGTLDLRSN------------------------QLKEYPVGACKLK-LSYLDLSN 284

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NSL  +     N+T+L +L L  N +  L   LV
Sbjct: 285 NSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLV 318



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 143/333 (42%), Gaps = 67/333 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  L  N++  L  ++ +L  L  L++  N+L E P    +L  L  LD+S NS+  +
Sbjct: 232 LVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-------------GRCLNLSDFKASN----NCI 149
             E+G+ T L K     N L+ L SSL              R  N  +  AS     N I
Sbjct: 291 HPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVI 350

Query: 150 TS--------------------LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            S                    +P ++ +  +++K+++  N +  L   L  S ++ T L
Sbjct: 351 ASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQT-L 409

Query: 190 IASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIP----SSISGC--------------- 229
           I S+N +   P  I  SL  L+ L L  N +  IP      +SG                
Sbjct: 410 ILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREH 469

Query: 230 ---C---SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
              C    L E Y+    LS +P ++  LS L  LDL+ N L+        +  L  LD+
Sbjct: 470 PKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDI 529

Query: 283 SNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLR 314
           SNN++S LPPE+G +  TL  L L GNPLR  +
Sbjct: 530 SNNNISSLPPELGLLEPTLEVLRLDGNPLRRYK 562



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 67/209 (32%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ KL L+ N I+
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S NK+   P AI                          ++  +
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAI-------------------------GELTAM 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD+S+N I+ LPE                  Q+  A +       L  LD S N L+ 
Sbjct: 94  KSLDVSFNSISELPE------------------QIGSAIS-------LVKLDCSSNRLKE 128

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELV 541
           +P+       L++L  ++N IS+LP ++V
Sbjct: 129 LPDSIGRCLDLSDLKATNNQISSLPEDMV 157



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 12/124 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D IL +  +   L L N  L+ VP++ ++             + +  E   +     LQ+
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVYQ------------CLETTGEGENWWEAVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     LT++  LD+S N+IS LP +
Sbjct: 50  LILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQ 109

Query: 540 LVSV 543
           + S 
Sbjct: 110 IGSA 113


>gi|1946300|emb|CAA73132.1| hypothetical protein [Silene latifolia]
          Length = 581

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/541 (71%), Positives = 464/541 (85%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAARTSGSLNLSNRSLRDVP EVYKNFD A EG+ WWE VDLQKLILAHNNIE L
Sbjct: 1   MDRLLKAARTSGSLNLSNRSLRDVPIEVYKNFDGAPEGENWWETVDLQKLILAHNNIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDL+NLPLLTVLNVSHNKL++LPAAIGEL  LKSLDVSFN +  IP EIGSAT+LVK D
Sbjct: 61  KEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNIPAEIGSATSLVKMD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+NQLKELPSSLG+CL+L++ KASNN I SLP+DLA C+K+ K+D+EGNKLT L + ++
Sbjct: 121 CSNNQLKELPSSLGQCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVV 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SW+ML+EL ASKNLL G+PETIG+L RLIRLDLHQNRI SIPSSI GC SL EF++G+N
Sbjct: 181 GSWSMLSELNASKNLLTGLPETIGTLVRLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP+ELG+LS+L  LDL SNQL EY  EAC+LRLSVLDLSNNSLSGLP EIG MT+L
Sbjct: 241 LLSSLPSELGELSQLSVLDLRSNQLTEYPAEACKLRLSVLDLSNNSLSGLPAEIGLMTSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNP+RT+RS+LV GPT ALLKYLR RLP  E+++  T +K++++ MA+RLS+T+
Sbjct: 301 RKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMVAMASRLSITT 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSL GM L A+P E+ E+ EITK+DLS+NSIQELP  LS+C+SL+ LILSRNKIKDWP
Sbjct: 361 KELSLVGMGLIAVPPEVCESNEITKVDLSKNSIQELPVTLSACSSLEVLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           +  L SL +L+CL+LDNNPL +VP +GF  +P LQILDLS  ++SL +NP F+SL HL E
Sbjct: 421 EDALKSLPNLTCLRLDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDNPAFASLQHLVE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYLRR++L+E P+DIL L++L+ILDLSQNSL SIP+GF+NLTSLTELDLSDN+I  LPPE
Sbjct: 481 LYLRRVKLQEVPSDILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELDLSDNSIGTLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 31/429 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL-PAAIGELHMLKSLDVSFN 101
           + +DL +L  ++N I  L +DL     L  +++  NKL+ L    +G   ML  L+ S N
Sbjct: 135 QCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVVGSWSMLSELNASKN 194

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P+ IG+   L++ D   N++K +PSS+  C +L +F   +N ++SLP +L + S+
Sbjct: 195 LLTGLPETIGTLVRLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSNLLSSLPSELGELSQ 254

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +S LD+  N+LT       A    L+ L  S N L+G+P  IG ++ L +L L  N + +
Sbjct: 255 LSVLDLRSNQLTEYPAE--ACKLRLSVLDLSNNSLSGLPAEIGLMTSLRKLVLIGNPMRT 312

Query: 222 IPSS-ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYCV------- 270
           I S+ ++G  +    Y+     SA  A++   SK   + + S      KE  +       
Sbjct: 313 IRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMVAMASRLSITTKELSLVGMGLIA 372

Query: 271 ---EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR-----TLRS------ 315
              E C+   ++ +DLS NS+  LP  +   ++L  L+L+ N ++      L+S      
Sbjct: 373 VPPEVCESNEITKVDLSKNSIQELPVTLSACSSLEVLILSRNKIKDWPEDALKSLPNLTC 432

Query: 316 -SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIP 373
             L N P   +       +P  +  + S     L+      S+    EL L  + L  +P
Sbjct: 433 LRLDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDNPAFASLQHLVELYLRRVKLQEVP 492

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           S+I    ++  LDLS+NS+  +P    +  SL  L LS N I   P  +     SL  L+
Sbjct: 493 SDILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELDLSDNSIGTLPPELGLLEPSLQALR 552

Query: 434 LDNNPLRQV 442
           LD NPLR +
Sbjct: 553 LDGNPLRSI 561



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 67/352 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  +  N +  L  +L  L  L+VL++  N+L+E PA   +L  L  LD+S NS+  +
Sbjct: 232 LVEFFIGSNLLSSLPSELGELSQLSVLDLRSNQLTEYPAEACKLR-LSVLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-------------GRCLNLSDFK---------- 143
           P EIG  T+L K     N ++ + S+L             GR  +  + +          
Sbjct: 291 PAEIGLMTSLRKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMV 350

Query: 144 --ASNNCITS------------LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
             AS   IT+            +P ++ + ++++K+D+  N +  L   L ++ + L  L
Sbjct: 351 AMASRLSITTKELSLVGMGLIAVPPEVCESNEITKVDLSKNSIQELPVTL-SACSSLEVL 409

Query: 190 IASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSS------------ISGCCS----- 231
           I S+N +   PE  + SL  L  L L  N +  +P +            +SGC S     
Sbjct: 410 ILSRNKIKDWPEDALKSLPNLTCLRLDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDN 469

Query: 232 --------LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
                   L E Y+    L  +P+++  L KL  LDL  N L         L  L+ LDL
Sbjct: 470 PAFASLQHLVELYLRRVKLQEVPSDILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELDL 529

Query: 283 SNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           S+NS+  LPPE+G +  +L+ L L GNPLR++R ++++  T A+L+YL+ ++
Sbjct: 530 SDNSIGTLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLQYLKDKI 581



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 46/315 (14%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L +  + +N +  L  +L  L  L  L++  N+L +      +L  L  LD+S N L+ +
Sbjct: 47  LQKLILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNI 106

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG  T+L K+  + N L+ L SSL      A LK   + +    D  A  TK     
Sbjct: 107 PAEIGSATSLVKMDCSNNQLKELPSSLGQCLDLAELKASNNLIGSLPDDLAYCTK----- 161

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEI---WEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                     ++ +EG  L+ +   +   W    +++L+ S+N +  LP  + +   L  
Sbjct: 162 --------LLKVDIEGNKLTTLLDPVVGSWSM--LSELNASKNLLTGLPETIGTLVRLIR 211

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L L +N+IK  P +I    SSL    + +N L  +PS+   ++  L +LDL  N      
Sbjct: 212 LDLHQNRIKSIPSSI-KGCSSLVEFFIGSNLLSSLPSE-LGELSQLSVLDLRSN------ 263

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                             QL E P +  +L+ L +LDLS NSL  +P     +TSL +L 
Sbjct: 264 ------------------QLTEYPAEACKLR-LSVLDLSNNSLSGLPAEIGLMTSLRKLV 304

Query: 528 LSDNNISALPPELVS 542
           L  N +  +   LV+
Sbjct: 305 LIGNPMRTIRSTLVT 319



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D +L +  +   L L N  LR VP + +K            N    PE   +     LQ+
Sbjct: 2   DRLLKAARTSGSLNLSNRSLRDVPIEVYK------------NFDGAPEGENWWETVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     L SL  LD+S N ++ +P E
Sbjct: 50  LILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNIPAE 109

Query: 540 LVS 542
           + S
Sbjct: 110 IGS 112


>gi|2760084|emb|CAA76000.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/541 (72%), Positives = 456/541 (84%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  + AGEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETAGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVE NKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEXNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +  CLKLDNNPL Q+P DGF+ I  LQILDLS N  S  E+P F  LP L+E
Sbjct: 421 GAILKSLPNPMCLKLDNNPLNQIPLDGFQVISGLQILDLSVNAVSFREHPKFCHLPQLRE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S+NNIS+LPPE
Sbjct: 481 LYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
               K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 PMCLKLDNNPLNQIPLDGFQVISGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGXLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 128/320 (40%), Gaps = 73/320 (22%)

Query: 280 LDLSNNSLSGLPPEIGK-------------MTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           L+LSN SL  +P E+ +                L+KL+L  N +  LR  L N     +L
Sbjct: 14  LNLSNRSLKDVPTEVYQCLETAGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVL 73

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               ++L     S+      +L  M        K L +   ++S +P +I  A  + KLD
Sbjct: 74  NVSHNKL-----SQLPAAIGELTAM--------KSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            S N ++ELP  +  C  L  L  + N+I   P+ ++   S LS L ++ N L  +  + 
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNC-SKLSKLDVEXNKLTALSENH 179

Query: 447 FKDIPMLQILDLSYN-IASLPEN--------------------PP--------------- 470
                ML  L+   N +  LP+N                    PP               
Sbjct: 180 IASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGI 239

Query: 471 --FSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
              S+LP        L  L LR  QL+E P    +L+ L  LDLS NSL  +     N+T
Sbjct: 240 NSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGLHPELGNMT 298

Query: 522 SLTELDLSDNNISALPPELV 541
           +L +L L  N +  L   LV
Sbjct: 299 TLRKLVLVGNPLRTLRSSLV 318



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 67/209 (32%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ KL L+ N I+
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETAGEGENWWEAVDLQKLILAHNDIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S NK+   P AI                          ++  +
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAI-------------------------GELTAM 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD+S+N I+ LPE                  Q+  A +       L  LD S N L+ 
Sbjct: 94  KSLDVSFNSISELPE------------------QIGSAIS-------LVKLDCSSNRLKE 128

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELV 541
           +P+       L++L  ++N IS+LP ++V
Sbjct: 129 LPDSIGRCLDLSDLKATNNQISSLPEDMV 157



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D IL +  +   L L N  L+ VP++ +      Q L+ +       E   +     LQ+
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVY------QCLETAG------EGENWWEAVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     LT++  LD+S N+IS LP +
Sbjct: 50  LILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQ 109

Query: 540 LVSV 543
           + S 
Sbjct: 110 IGSA 113


>gi|15795106|dbj|BAB02370.1| leucine-rich repeat protein; contains similarity to
           elicitor-inducible receptor EIR [Arabidopsis thaliana]
          Length = 594

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/551 (70%), Positives = 458/551 (83%), Gaps = 11/551 (1%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS N  S  E+P F  LP L+E
Sbjct: 421 GAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRE 480

Query: 480 LYLR----------RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
           LYLR          R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S
Sbjct: 481 LYLRYRIPYTSLDSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDIS 540

Query: 530 DNNISALPPEL 540
           +NNIS+LPPEL
Sbjct: 541 NNNISSLPPEL 551



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 188/439 (42%), Gaps = 96/439 (21%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L    N +  L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +
Sbjct: 186 LAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTL 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EIG  + L   D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL
Sbjct: 246 PAEIGDLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKL 303

Query: 166 DVEGNKLTVLSN--------------------------------NLIASWTMLTELIASK 193
            + GN L  L +                                N+IAS   ++  I+SK
Sbjct: 304 VLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMS--ISSK 361

Query: 194 NL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP- 246
            L      L+ +P  +     + +++L +N I  +P+ +S   SL    +  N +   P 
Sbjct: 362 ELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPG 421

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLP-PEIGKMTTLRKL 303
           A L  L  L  L L +N L +  ++  Q+   L +LDLS N++S    P+   +  LR+L
Sbjct: 422 AILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLREL 481

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                                   YLR R+P               ++ +R+        
Sbjct: 482 ------------------------YLRYRIP-------------YTSLDSRIQ------- 497

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
                LS +P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  + 
Sbjct: 498 -----LSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELG 552

Query: 424 TSLSSLSCLKLDNNPLRQV 442
               +L  L+LD NPLR +
Sbjct: 553 LLEPTLEVLRLDGNPLRSI 571



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 56/268 (20%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-------- 189
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL        
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLRYRIPY 489

Query: 190 --IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
             + S+  L+ +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP 
Sbjct: 490 TSLDSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPP 549

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           ELG L                                              TL  L L G
Sbjct: 550 ELGLLEP--------------------------------------------TLEVLRLDG 565

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           NPLR++R  ++   T A+L YL+ RLP+
Sbjct: 566 NPLRSIRRPILERGTKAVLNYLKDRLPD 593



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 269 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +    + L  LD S+N L  LP  IG+   L  L  T N + +L   +VN    + L 
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLD 166

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E ++ +   E+ I   T L+    EL+     L  +P  I     + +LDL
Sbjct: 167 V--------EGNKLTALSENHIASWTMLA----ELNACKNMLGVLPQNIGSLSRLIRLDL 214

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N I  +PP +  C+SL    L  N +   P  I                         
Sbjct: 215 HQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEI------------------------- 249

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            D+  L  LDL  N                        QL+E P    +L+ L  LDLS 
Sbjct: 250 GDLSRLGTLDLRSN------------------------QLKEYPVGACKLK-LSYLDLSN 284

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NSL  +     N+T+L +L L  N +  L   LV
Sbjct: 285 NSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLV 318



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 67/209 (32%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ KL L+ N I+
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S NK+   P AI                          ++  +
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAI-------------------------GELTAM 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD+S+N I+ LPE                  Q+  A +       L  LD S N L+ 
Sbjct: 94  KSLDVSFNSISELPE------------------QIGSAIS-------LVKLDCSSNRLKE 128

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELV 541
           +P+       L++L  ++N IS+LP ++V
Sbjct: 129 LPDSIGRCLDLSDLKATNNQISSLPEDMV 157



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 12/124 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D IL +  +   L L N  L+ VP++ ++             + +  E   +     LQ+
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVYQ------------CLETTGEGENWWEAVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     LT++  LD+S N+IS LP +
Sbjct: 50  LILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQ 109

Query: 540 LVSV 543
           + S 
Sbjct: 110 IGSA 113


>gi|334185371|ref|NP_001189901.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|332642150|gb|AEE75671.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/547 (71%), Positives = 456/547 (83%), Gaps = 7/547 (1%)

Query: 1   MDRILKAARTSGSLNLSNRSLR------DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH 54
           MDRILKAARTSGSLNLSNRSL       DVP EVY+  +  GEG+ WWEAVDLQKLILAH
Sbjct: 1   MDRILKAARTSGSLNLSNRSLNFDPITWDVPTEVYQCLETTGEGENWWEAVDLQKLILAH 60

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+IE L+EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA 
Sbjct: 61  NDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAI 120

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +LVK DCSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT 
Sbjct: 121 SLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTA 180

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL E
Sbjct: 181 LSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVE 240

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
           FY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+
Sbjct: 241 FYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPEL 300

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMAT 353
           G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A 
Sbjct: 301 GNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAA 360

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRN
Sbjct: 361 RMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRN 420

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           KIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS N  S  E+P F  
Sbjct: 421 KIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCH 480

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S+NNI
Sbjct: 481 LPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNI 540

Query: 534 SALPPEL 540
           S+LPPEL
Sbjct: 541 SSLPPEL 547



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 39/437 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLD 97
           D     +DL  L   +N I  L ED+ N   L+ L+V  NKL+ L    I    ML  L+
Sbjct: 137 DSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELN 196

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
              N +  +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ 
Sbjct: 197 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIG 256

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D S++  LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N
Sbjct: 257 DLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGN 314

Query: 218 RILSIPSSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCV 270
            + ++ SS+    + A      + LS       + P +   ++    + + S   KE  +
Sbjct: 315 PLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSL 371

Query: 271 EACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           E   L            ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++ 
Sbjct: 372 EGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILK 431

Query: 320 GPTPALLKYLRSRLPENEDS-EASTTKEDLITMATRLSVTS-------------KELSLE 365
              P L+       P N+   +       L  +   ++  S             +EL L 
Sbjct: 432 S-LPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLS 490

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
            + LS +P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  +   
Sbjct: 491 RIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLL 550

Query: 426 LSSLSCLKLDNNPLRQV 442
             +L  L+LD NPLR +
Sbjct: 551 EPTLEVLRLDGNPLRSI 567



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 376 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 435

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 436 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 495

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 496 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 552

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 553 -----------------------------------------TLEVLRLDGNPLRSIRRPI 571

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 572 LERGTKAVLNYLKDRLPD 589



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 53  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 112

Query: 269 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +    + L  LD S+N L  LP  IG+   L  L  T N + +L   +VN    + L 
Sbjct: 113 PEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLD 172

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E ++ +   E+ I   T L+    EL+     L  +P  I     + +LDL
Sbjct: 173 V--------EGNKLTALSENHIASWTMLA----ELNACKNMLGVLPQNIGSLSRLIRLDL 220

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N I  +PP +  C+SL    L  N +   P  I                         
Sbjct: 221 HQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEI------------------------- 255

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            D+  L  LDL  N                        QL+E P    +L+ L  LDLS 
Sbjct: 256 GDLSRLGTLDLRSN------------------------QLKEYPVGACKLK-LSYLDLSN 290

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NSL  +     N+T+L +L L  N +  L   LV
Sbjct: 291 NSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLV 324



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 474 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 533

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 534 DISNNNISSLPPELG 548



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 51/166 (30%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WEA ++ KL L+ N I+ L  +L + A L  L +S NK+   P AI              
Sbjct: 48  WEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAI-------------- 93

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
                       ++  ++ LD+S+N I+ LPE                  Q+  A +   
Sbjct: 94  -----------GELTAMKSLDVSFNSISELPE------------------QIGSAIS--- 121

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
               L  LD S N L+ +P+       L++L  ++N IS+LP ++V
Sbjct: 122 ----LVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMV 163


>gi|2760086|emb|CAA76001.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/541 (71%), Positives = 454/541 (83%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML E  A K++L  +P+ IGSLSRLIR D HQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQTLILSRNKIKDWP
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS N  S  E+P F  LP L+E
Sbjct: 421 GAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+TSL  LD+S+NNIS+LPPE
Sbjct: 481 LYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 198/437 (45%), Gaps = 39/437 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLD 97
           D     +DL  L   +N I  L ED+ N   L+ L+V  NKL+ L    I    ML   +
Sbjct: 131 DSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAEPN 190

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
              + +  +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ 
Sbjct: 191 ACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIG 250

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D S++  LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N
Sbjct: 251 DLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGN 308

Query: 218 RILSIPSSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCV 270
            + ++ SS+    + A      + LS       + P +   ++    + + S   KE  +
Sbjct: 309 PLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSL 365

Query: 271 EACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           E   L            ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++ 
Sbjct: 366 EGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILK 425

Query: 320 GPTPALLKYLRSRLPENEDS-EASTTKEDLITMATRLSVTS-------------KELSLE 365
              P L+       P N+   +       L  +   ++  S             +EL L 
Sbjct: 426 S-LPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLS 484

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
            + LS +P +I     +  LDL++NS+Q +P  + +  SL+ L +S N I   P  +   
Sbjct: 485 RIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLL 544

Query: 426 LSSLSCLKLDNNPLRQV 442
             +L  L+LD NPLR +
Sbjct: 545 EPTLEVLRLDGNPLRSI 561



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 126/320 (39%), Gaps = 73/320 (22%)

Query: 280 LDLSNNSLSGLPPEIGK-------------MTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           L+LSN SL  +P E+ +                L+KL+L  N +  LR  L N     +L
Sbjct: 14  LNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVL 73

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               ++L     S+      +L  M        K L +   ++S +P +I  A  + KLD
Sbjct: 74  NVSHNKL-----SQLPAAIGELTAM--------KSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            S N ++ELP  +  C  L  L  + N+I   P+ ++   S LS L ++ N L  +  + 
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNC-SKLSKLDVEGNKLTALSENH 179

Query: 447 FKDIPML--------QILDLSYNIASL-------PENPPFSSLP-------HLQELYL-- 482
                ML         +  L  NI SL       P     SS+P        L E YL  
Sbjct: 180 IASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPSIGGCSSLVEFYLGI 239

Query: 483 ---------------------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
                                R  QL+E P    +L+ L  LDLS NSL  +     N+T
Sbjct: 240 NSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGLHPELGNMT 298

Query: 522 SLTELDLSDNNISALPPELV 541
           +L +L L  N +  L   LV
Sbjct: 299 TLRKLVLVGNPLRTLRSSLV 318



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 67/209 (32%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 393
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ KL L+ N I+
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIE 58

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L  +L + A L  L +S NK+   P AI                          ++  +
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAI-------------------------GELTAM 93

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + LD+S+N I+ LPE                  Q+  A +       L  LD S N L+ 
Sbjct: 94  KSLDVSFNSISELPE------------------QIGSAIS-------LVKLDCSSNRLKE 128

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELV 541
           +P+       L++L  ++N IS+LP ++V
Sbjct: 129 LPDSIGRCLDLSDLKATNNQISSLPEDMV 157



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D IL +  +   L L N  L+ VP++ +      Q L+ +       E   +     LQ+
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVY------QCLETTG------EGENWWEAVDLQK 49

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L    +     D+  L  L +L++S N L  +P     LT++  LD+S N+IS LP +
Sbjct: 50  LILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQ 109

Query: 540 LVSV 543
           + S 
Sbjct: 110 IGSA 113


>gi|242067058|ref|XP_002454818.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
 gi|241934649|gb|EES07794.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
          Length = 586

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/543 (65%), Positives = 432/543 (79%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP SL +C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL +LS N+ 
Sbjct: 121 FSNNFLTELPPSLAKCPDLSELKASNNNISRIPDVLAGCSKLSKLDLEGNKLVMLSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAEFYMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP ELS C+SLQ+L+LS NKIK 
Sbjct: 361 SSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKK 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  +++SL SLS LKLDNNPL ++ S     +  L++LDLS N ++LPE    S+LP L
Sbjct: 421 WPRTVVSSLPSLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            ELYLRRM+L E P  +L L+QLRILDLSQNSL ++PEG KN T+L ELDLSDNNI+ALP
Sbjct: 481 HELYLRRMKLHEFPNGLLGLKQLRILDLSQNSLTTVPEGIKNFTALIELDLSDNNITALP 540

Query: 538 PEL 540
            EL
Sbjct: 541 AEL 543



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 153/355 (43%), Gaps = 69/355 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  + +N +  +  D+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAEFYMGNNLLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G  T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDD 350

Query: 134 ----GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL------------ 175
                R L+LS  +   S   +TS+P    + S + KLD+  N +  L            
Sbjct: 351 QIAAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQS 410

Query: 176 ---SNNLIASW--------TMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQN-RILSI 222
              SNN I  W          L+ L    N L  +  T +  LS+L  LDL  N   L  
Sbjct: 411 LVLSNNKIKKWPRTVVSSLPSLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPE 470

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVL 280
           PS++S    L E Y+    L   P  L  L +L  LDL  N L     E  +    L  L
Sbjct: 471 PSAVSALPQLHELYLRRMKLHEFPNGLLGLKQLRILDLSQNSLT-TVPEGIKNFTALIEL 529

Query: 281 DLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           DLS+N+++ LP E+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 530 DLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAILKYLKEKLP 584



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 166/417 (39%), Gaps = 98/417 (23%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +LI + N L  + E + +LS L+ L++  N I S+P++I     L    +  N ++ L
Sbjct: 47  LQKLILAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQINTL 106

Query: 246 PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P E+G  + L  +D  +N L E    +  C   LS L  SNN++S +P  +   + L KL
Sbjct: 107 PEEIGLATALVKVDFSNNFLTELPPSLAKCP-DLSELKASNNNISRIPDVLAGCSKLSKL 165

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L GN L  L                                E++    T L+    EL+
Sbjct: 166 DLEGNKLVML-------------------------------SENMFVSWTMLT----ELN 190

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI- 422
           L    L+AIPS I    ++ +LD+ +N I  +PP +  C+SL    +  N +   P  I 
Sbjct: 191 LAKNLLTAIPSSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAEFYMGNNLLSSIPADIG 250

Query: 423 -LTSLS-------------------SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            L+ L                     LS L L NN L  +P++    +  L+ L L+ N 
Sbjct: 251 MLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAE-LGKMTTLRKLLLTGNP 309

Query: 462 ----IASLPENPPFSSLPHL---------------------------------QELYLRR 484
                +SL   P  + L +L                                 +EL L  
Sbjct: 310 MRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDDQIAAARRLSLSSKELDLSG 369

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           + +   P        +  LDLS+NS++ +P      +SL  L LS+N I   P  +V
Sbjct: 370 LGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKKWPRTVV 426


>gi|357137806|ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 586

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/543 (64%), Positives = 434/543 (79%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR+VP EVY N D   + DKWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREVPGEVYNNLDTGSQDDKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN++  LPAAIG+L +LKSLD+SFN I  +P+EIG A ALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNQIYSLPAAIGDLPLLKSLDISFNQINTVPEEIGLAAALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP+SL  CLNLS+ KASNN I+ +P++LA CSK+SKLD+EGNKL +LS N+ 
Sbjct: 121 FSNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSKLSKLDLEGNKLEMLSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +SWT+LTEL A+KN+L  +P +IG+LS+LIRLDLHQN+I  IPSSI GC SLAEFYMGNN
Sbjct: 181 SSWTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L ++PA++G LSKLGTLDLHSNQLKEY V AC+L+LS LDLSNN+LSGLPPE+G MTTL
Sbjct: 241 LLLSIPADIGMLSKLGTLDLHSNQLKEYPVGACKLKLSFLDLSNNTLSGLPPELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSV 357
           RKLLL+GNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  S    TK+D +  A RLS+
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGRTPTKDDQVAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL+L G+ ++++P   WE  ++ KLDLS+NSI++LP EL+ C+SLQ L+LS NKIK 
Sbjct: 361 SSKELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNELTLCSSLQALVLSNNKIKK 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  +++SL SLS LKLDNNPL ++ S   + +  L++LDLS N +SL +    SSLP L
Sbjct: 421 WPGMVVSSLPSLSSLKLDNNPLAEISSTDLEVLSKLEVLDLSGNASSLTKPSALSSLPQL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QELYLRR++L E P  +L L+ LRILDLSQN L +IPEG K  T+L EL+LSDNNI+ALP
Sbjct: 481 QELYLRRVKLHEFPIGLLGLKLLRILDLSQNYLTTIPEGIKEFTALIELNLSDNNITALP 540

Query: 538 PEL 540
            EL
Sbjct: 541 AEL 543



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 194/466 (41%), Gaps = 147/466 (31%)

Query: 8   ARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RN 66
           A  +G LNLS   L+   N++ +  DE     K      L KL L  N +E L E++  +
Sbjct: 131 ASLAGCLNLS--ELKASNNKISRIPDELAGCSK------LSKLDLEGNKLEMLSENMFSS 182

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF------- 119
             +LT LN + N L+ +PA+IG L  L  LD+  N I  IP  I   ++L +F       
Sbjct: 183 WTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNNLL 242

Query: 120 ----------------DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKM 162
                           D  SNQLKE P  +G C L LS    SNN ++ LP +L   + +
Sbjct: 243 LSIPADIGMLSKLGTLDLHSNQLKEYP--VGACKLKLSFLDLSNNTLSGLPPELGTMTTL 300

Query: 163 SKLDVEGNKLTVLSNNLIA--SWTMLTEL------------------------------I 190
            KL + GN +  L ++L++  + T+L  L                              +
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGRTPTKDDQVAAARRLSL 360

Query: 191 ASKNL-LNGM-----PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +SK L L+G+     P      S +++LDL +N I  +P+ ++ C SL    + NN +  
Sbjct: 361 SSKELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNELTLCSSLQALVLSNNKIKK 420

Query: 245 LPA-------------------------ELGKLSKLGTLDLHSN--------------QL 265
            P                          +L  LSKL  LDL  N              QL
Sbjct: 421 WPGMVVSSLPSLSSLKLDNNPLAEISSTDLEVLSKLEVLDLSGNASSLTKPSALSSLPQL 480

Query: 266 KEYCVEACQLR----------------------------------LSVLDLSNNSLSGLP 291
           +E  +   +L                                   L  L+LS+N+++ LP
Sbjct: 481 QELYLRRVKLHEFPIGLLGLKLLRILDLSQNYLTTIPEGIKEFTALIELNLSDNNITALP 540

Query: 292 PEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            E+G +   L+ L L GNPLR++R ++++  T A+L+YL+ +LP +
Sbjct: 541 AELGLLEPNLQVLKLDGNPLRSIRRTVLDRGTKAVLQYLKDKLPSH 586



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 205/452 (45%), Gaps = 43/452 (9%)

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           SL++S  S+ ++P E+ +       D  S   K         ++L     ++N +  L E
Sbjct: 13  SLNLSNRSLREVPGEVYN-----NLDTGSQDDK-----WWEGVDLQKLILAHNNLEVLRE 62

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           DL + S +  L++  N++  L    I    +L  L  S N +N +PE IG  + L+++D 
Sbjct: 63  DLRNLSSLVVLNISHNQIYSLPA-AIGDLPLLKSLDISFNQINTVPEEIGLAAALVKVDF 121

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVE 271
             N +  +P+S++GC +L+E    NN +S +P EL   SKL  LDL  N+L+   E    
Sbjct: 122 SNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSKLSKLDLEGNKLEMLSENMFS 181

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           +  + L+ L+ + N L+ +P  IG ++ L +L L  N + TL  S + G +     Y+ +
Sbjct: 182 SWTI-LTELNAAKNILTTIPASIGALSKLIRLDLHQNKI-TLIPSSIKGCSSLAEFYMGN 239

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            L              L+++   + + SK   L L    L   P    +  +++ LDLS 
Sbjct: 240 NL--------------LLSIPADIGMLSKLGTLDLHSNQLKEYPVGACKL-KLSFLDLSN 284

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N++  LPPEL +  +L+ L+LS N ++    ++++  +S     L +       + G   
Sbjct: 285 NTLSGLPPELGTMTTLRKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGR 344

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
            P       +    SL            +EL L  + +   P        +  LDLS+NS
Sbjct: 345 TPTKDDQVAAARRLSLSS----------KELNLSGLGVTSVPPAAWETSDVVKLDLSKNS 394

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           ++ +P      +SL  L LS+N I   P  +V
Sbjct: 395 IEDLPNELTLCSSLQALVLSNNKIKKWPGMVV 426


>gi|293333389|ref|NP_001169465.1| uncharacterized protein LOC100383336 [Zea mays]
 gi|224029533|gb|ACN33842.1| unknown [Zea mays]
          Length = 584

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/541 (64%), Positives = 428/541 (79%), Gaps = 1/541 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHNK+S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP +L  C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL  LS N+ 
Sbjct: 121 FSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAE YMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E+   ST TK+D I  A RLS++S
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQIAAARRLSLSS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP ELS C+SLQ+L+LS NKIK WP
Sbjct: 361 KELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWP 420

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             +++SL  LS LKLDNNPL ++ S     +  L++LDLS N ++LPE    S+LP LQE
Sbjct: 421 HTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQE 480

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYLRRM+L E P  +L L+ LRILDLSQN L ++PEG KN T+L ELDLSDNNI+ALP E
Sbjct: 481 LYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAE 540

Query: 540 L 540
           L
Sbjct: 541 L 541



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 204/429 (47%), Gaps = 37/429 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSIM 104
           DL +L  ++NNI ++ + L     L+ L++  NKL  L   +     ML  L+++ N + 
Sbjct: 138 DLSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLT 197

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP  IG+   L++ D   N++  +P S+  C +L++    NN ++S+P D+   SK+  
Sbjct: 198 AIPGSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAELYMGNNLLSSIPADIGTLSKLGI 257

Query: 165 LDVEGNKLT---VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           LD+  N+L    V + NL  S+  L     S N L+G+P  +G ++ L +L L  N + +
Sbjct: 258 LDLHSNQLKEYPVGACNLKLSFLDL-----SNNSLSGLPAELGKMTTLRKLLLTGNPMRT 312

Query: 222 IPSS-ISGCCSLAEFYMGNNALS------ALPAELGKLSKLGTLDLHSNQLK-----EYC 269
           + SS +SG  +    Y+ +   S      + P +  +++    L L S +L         
Sbjct: 313 LRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 372

Query: 270 VEACQLRLS---VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG-PTPAL 325
           V A     S    LDLS NS+  LP E+   ++L+ L+L+ N ++    ++V+  P  + 
Sbjct: 373 VPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSS 432

Query: 326 LKYLRSRLPENEDSEASTTKE----DLITMATRLSVTS--------KELSLEGMNLSAIP 373
           LK   + L E   ++     +    DL   A+ L   S        +EL L  M L   P
Sbjct: 433 LKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELYLRRMKLHEFP 492

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           + +     +  LDLS+N +  +P  + +  +L  L LS N I   P  +    ++L  LK
Sbjct: 493 NGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELGLLEANLQVLK 552

Query: 434 LDNNPLRQV 442
           LD NPLR +
Sbjct: 553 LDGNPLRSI 561



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 157/353 (44%), Gaps = 67/353 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L + +N +  +  D+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G  T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQI 350

Query: 134 --GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL-------------- 175
              R L+LS  +   S   +TS+P    + S + KLD+  N +  L              
Sbjct: 351 AAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLV 410

Query: 176 -SNNLIASW--TMLTEL--IASKNLLNGMPETIGS-----LSRLIRLDLHQN-RILSIPS 224
            SNN I  W  T+++ L  ++S  L N     I S     LS+L  LDL  N   L  PS
Sbjct: 411 LSNNKIKRWPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPS 470

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 282
           ++S    L E Y+    L   P  L  L  L  LDL  N L     E  +    L  LDL
Sbjct: 471 AVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLT-TVPEGIKNFTALIELDL 529

Query: 283 SNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           S+N+++ LP E+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 530 SDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKEKLP 582



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 46/391 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +LI + N L  + E + +LS L+ L++  N+I S+P++I     L    M  N ++ L
Sbjct: 47  LQKLILAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTL 106

Query: 246 PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P E+G  + L  +D  +N L E    +  C   LS L  SNN++S +P  +   + L KL
Sbjct: 107 PEEIGLATALVKVDFSNNCLTELPPNLATCP-DLSELKASNNNISRVPDVLAGCSKLSKL 165

Query: 304 LLTGNPLRTLRSSL-------------------VNGPTPALLKYLRSRLPENEDSEASTT 344
            L GN L  L  ++                   + G   AL K +R  + +N+ +    +
Sbjct: 166 DLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITSIPPS 225

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA- 403
            +   ++A        EL +    LS+IP++I    ++  LDL  N ++E P  + +C  
Sbjct: 226 IKGCSSLA--------ELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYP--VGACNL 275

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
            L  L LS N +   P A L  +++L  L L  NP+R + S          +  L   ++
Sbjct: 276 KLSFLDLSNNSLSGLP-AELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLS 334

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI------------LDLSQNSLQ 511
           S  E    +     Q    RR+ L     D+  L    +            LDLS+NS++
Sbjct: 335 SDEEGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIE 394

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            +P      +SL  L LS+N I   P  +VS
Sbjct: 395 DLPNELSLCSSLQSLVLSNNKIKRWPHTVVS 425



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM------------LQILDLSYN-IASLP 466
           + IL S      L L N  LR++P + + ++              LQ L L++N +  L 
Sbjct: 2   ERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVLR 61

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           E+    +L  L  L +   ++   P  I  L  L+ LD+S N + ++PE     T+L ++
Sbjct: 62  ED--LRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKV 119

Query: 527 DLSDNNISALPPELVS 542
           D S+N ++ LPP L +
Sbjct: 120 DFSNNCLTELPPNLAT 135


>gi|195640496|gb|ACG39716.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 586

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/543 (64%), Positives = 428/543 (78%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHNK+S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP +L  C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL  LS N+ 
Sbjct: 121 FSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAE YMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITSIPPSIKGCSSLAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED---SEASTTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E+   S ++ TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL L  + ++++P+  WE  ++ KLDLS+NSI++LP ELS C+SLQ+L+LS NKIK 
Sbjct: 361 SSKELDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKR 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  +++SL  LS LKLDNNPL ++ S     +  L++LDLS N ++LPE    S+LP L
Sbjct: 421 WPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QELYLRRM+L E P  +L L+ LRILDLSQN L ++PEG KN T+L ELDLSDNNI+ALP
Sbjct: 481 QELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALP 540

Query: 538 PEL 540
            EL
Sbjct: 541 AEL 543



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 158/355 (44%), Gaps = 69/355 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L + +N +  +  D+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--GRCLNL---------SDFKASNN-------- 147
           P E+G  T L K   + N ++ L SSL  G    L         SD +AS +        
Sbjct: 291 PAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSRSTPTKDD 350

Query: 148 --------------------CITSLPEDLADCSKMSKLDVEGNKLTVL------------ 175
                                +TS+P    + S + KLD+  N +  L            
Sbjct: 351 QIAAARRLSLSSKELDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQS 410

Query: 176 ---SNNLIASW--TMLTEL--IASKNLLNGMPETIGS-----LSRLIRLDLHQN-RILSI 222
              SNN I  W  T+++ L  ++S  L N     I S     LS+L  LDL  N   L  
Sbjct: 411 LVLSNNKIKRWPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPE 470

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVL 280
           PS++S    L E Y+    L   P  L  L  L  LDL  N L     E  +    L  L
Sbjct: 471 PSAVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLT-TVPEGIKNFTALIEL 529

Query: 281 DLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           DLS+N+++ LP E+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 530 DLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKEKLP 584



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 172/393 (43%), Gaps = 48/393 (12%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +LI + N L  + E + +LS L+ L++  N+I S+P++I     L    M  N ++ L
Sbjct: 47  LQKLILAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTL 106

Query: 246 PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P E+G  + L  +D  +N L E    +  C   LS L  SNN++S +P  +   + L KL
Sbjct: 107 PEEIGLATALVKVDFSNNCLTELPPNLATCP-DLSELKASNNNISRVPDVLAGCSKLSKL 165

Query: 304 LLTGNPLRTLRSSL-------------------VNGPTPALLKYLRSRLPENEDSEASTT 344
            L GN L  L  ++                   + G   AL K +R  + +N+ +    +
Sbjct: 166 DLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITSIPPS 225

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA- 403
            +   ++A        EL +    LS+IP++I    ++  LDL  N ++E P  + +C  
Sbjct: 226 IKGCSSLA--------ELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYP--VGACNL 275

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
            L  L LS N +   P A L  +++L  L L  NP+R + S          +  L   ++
Sbjct: 276 KLSFLDLSNNSLSGLP-AELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLS 334

Query: 464 SLPENPPFSSLP--------------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           S  E     S P                +EL L  + +   P        +  LDLS+NS
Sbjct: 335 SDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSVLGVTSVPAAAWETSDVVKLDLSKNS 394

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           ++ +P      +SL  L LS+N I   P  +VS
Sbjct: 395 IEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVS 427



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM------------LQILDLSYN-IASLP 466
           + IL S      L L N  LR++P + + ++              LQ L L++N +  L 
Sbjct: 2   ERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVLR 61

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           E+    +L  L  L +   ++   P  I  L  L+ LD+S N + ++PE     T+L ++
Sbjct: 62  ED--LRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKV 119

Query: 527 DLSDNNISALPPELVS 542
           D S+N ++ LPP L +
Sbjct: 120 DFSNNCLTELPPNLAT 135


>gi|115449939|ref|NP_001048588.1| Os02g0826600 [Oryza sativa Japonica Group]
 gi|48716443|dbj|BAD23050.1| putative disease resistance protein Hcr2-5D [Oryza sativa Japonica
           Group]
 gi|113538119|dbj|BAF10502.1| Os02g0826600 [Oryza sativa Japonica Group]
          Length = 586

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 348/543 (64%), Positives = 426/543 (78%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I   P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS C+SLQ+LILS NKIK 
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKR 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS + +SLPE    S LPHL
Sbjct: 421 WPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+LTSL ELDLSDNNI+ LP
Sbjct: 481 KELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLP 540

Query: 538 PEL 540
           PEL
Sbjct: 541 PEL 543



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 198/438 (45%), Gaps = 51/438 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSI 103
           ++L +L  ++N I  L ++L     L  LN+  NKL  L   +     ML  ++ + N +
Sbjct: 137 LELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLL 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD IG+ + L++ D   N++  +P S+  C +L++F   NN +TS+PED+   S + 
Sbjct: 197 TAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L+G+P  +G+++ L +L L  N + ++ 
Sbjct: 257 ILDLHSNQLKEYP--VGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLR 314

Query: 224 SS-ISGCCSLAEFYM--------GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           SS +SG  +    Y+        G +   + P +  +++    L L S +L    +    
Sbjct: 315 SSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 374

Query: 275 L--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-------- 318
           +         +  LDLS NS+  LP E+   ++L+ L+L+ N ++    ++         
Sbjct: 375 VPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGTVFSSLASLSL 434

Query: 319 ----NGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTS--------KELSL 364
               N P   +L           D EA +  E  DL   A+ L   S        KEL L
Sbjct: 435 LKLDNNPLAEILAT---------DLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELYL 485

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             M L   P  +     +  LDLS+N +  +P  +    SL  L LS N I   P  +  
Sbjct: 486 RRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGL 545

Query: 425 SLSSLSCLKLDNNPLRQV 442
              +L  LKLD NPLR +
Sbjct: 546 LEPNLQVLKLDGNPLRSI 563



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 157/354 (44%), Gaps = 67/354 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  + +N +  + ED+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G+ T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDD 350

Query: 134 ----GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL------------ 175
                R L+LS  +   S   +TS+P    + + + KLD+  N +  L            
Sbjct: 351 QIAAARRLSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQS 410

Query: 176 ---SNNLIASW--TMLTELIASKNLL---NGMPETIGS----LSRLIRLDLHQN-RILSI 222
              SNN I  W  T+ + L +   L    N + E + +    LS+L  LDL  +   L  
Sbjct: 411 LILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPE 470

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           PS++S    L E Y+    L   P  L  L  L  LDL  N L         L  L  LD
Sbjct: 471 PSAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELD 530

Query: 282 LSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LS+N+++ LPPE+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 531 LSDNNITTLPPELGLLEPNLQVLKLDGNPLRSIRRTLLERGTKAILKYLKEKLP 584


>gi|218191855|gb|EEC74282.1| hypothetical protein OsI_09529 [Oryza sativa Indica Group]
          Length = 1017

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 348/543 (64%), Positives = 427/543 (78%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINALPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS C+SLQ+LILS NKIK 
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKR 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS + +SLPE    S LPHL
Sbjct: 421 WPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+LTSL ELDLSDNNI+ LP
Sbjct: 481 KELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLP 540

Query: 538 PEL 540
           PEL
Sbjct: 541 PEL 543



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 199/438 (45%), Gaps = 51/438 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSI 103
           ++L +L  ++N I  L ++L     L  LN+  NKL  L   +     ML  ++ + N +
Sbjct: 137 LELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLL 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD IG+ + L++ D   N++  +P S+  C +L++F   NN +TS+PED+   S + 
Sbjct: 197 TAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L+G+P  +G+++ L +L L  N + ++ 
Sbjct: 257 ILDLHSNQLKEYP--VGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLR 314

Query: 224 SS-ISGCCSLAEFYM--------GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           SS +SG  +    Y+        G +   + P +  +++    L L S +L    +    
Sbjct: 315 SSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 374

Query: 275 LRLSV--------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-------- 318
           +  +         LDLS NS+  LP E+   ++L+ L+L+ N ++    ++         
Sbjct: 375 VPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGTVFSSLASLSL 434

Query: 319 ----NGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTS--------KELSL 364
               N P   +L           D EA +  E  DL   A+ L   S        KEL L
Sbjct: 435 LKLDNNPLAEILA---------TDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELYL 485

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             M L   P  +     +  LDLS+N +  +P  +    SL  L LS N I   P  +  
Sbjct: 486 RRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGL 545

Query: 425 SLSSLSCLKLDNNPLRQV 442
              +L  LKLD NPLR+V
Sbjct: 546 LEPNLQVLKLDGNPLRRV 563



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 3/204 (1%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +P A  E + +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 365 LDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGT 424

Query: 133 LGRCLNLSDFKASNN--CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L        +N      L  DL   SK+  LD+ G+  ++   + ++    L EL 
Sbjct: 425 VFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELY 484

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+G P+++  L  L  LDL QN + S+P  I    SL E  + +N ++ LP ELG
Sbjct: 485 LRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELG 544

Query: 251 KLS-KLGTLDLHSNQLKEYCVEAC 273
            L   L  L L  N L+      C
Sbjct: 545 LLEPNLQVLKLDGNPLRRVIDVKC 568


>gi|222623959|gb|EEE58091.1| hypothetical protein OsJ_08960 [Oryza sativa Japonica Group]
          Length = 939

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 348/543 (64%), Positives = 426/543 (78%), Gaps = 3/543 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I   P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS C+SLQ+LILS NKIK 
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKR 420

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS + +SLPE    S LPHL
Sbjct: 421 WPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHL 480

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+LTSL ELDLSDNNI+ LP
Sbjct: 481 KELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLP 540

Query: 538 PEL 540
           PEL
Sbjct: 541 PEL 543



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 199/438 (45%), Gaps = 51/438 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSI 103
           ++L +L  ++N I  L ++L     L  LN+  NKL  L   +     ML  ++ + N +
Sbjct: 137 LELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLL 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD IG+ + L++ D   N++  +P S+  C +L++F   NN +TS+PED+   S + 
Sbjct: 197 TAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L+G+P  +G+++ L +L L  N + ++ 
Sbjct: 257 ILDLHSNQLKEYP--VGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLR 314

Query: 224 SS-ISGCCSLAEFYM--------GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           SS +SG  +    Y+        G +   + P +  +++    L L S +L    +    
Sbjct: 315 SSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 374

Query: 275 LRLSV--------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-------- 318
           +  +         LDLS NS+  LP E+   ++L+ L+L+ N ++    ++         
Sbjct: 375 VPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGTVFSSLASLSL 434

Query: 319 ----NGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTS--------KELSL 364
               N P   +L           D EA +  E  DL   A+ L   S        KEL L
Sbjct: 435 LKLDNNPLAEILA---------TDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELYL 485

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             M L   P  +     +  LDLS+N +  +P  +    SL  L LS N I   P  +  
Sbjct: 486 RRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGL 545

Query: 425 SLSSLSCLKLDNNPLRQV 442
              +L  LKLD NPLR+V
Sbjct: 546 LEPNLQVLKLDGNPLRRV 563



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 3/204 (1%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +P A  E + +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 365 LDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGT 424

Query: 133 LGRCLNLSDFKASNN--CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L        +N      L  DL   SK+  LD+ G+  ++   + ++    L EL 
Sbjct: 425 VFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELY 484

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+G P+++  L  L  LDL QN + S+P  I    SL E  + +N ++ LP ELG
Sbjct: 485 LRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELG 544

Query: 251 KLS-KLGTLDLHSNQLKEYCVEAC 273
            L   L  L L  N L+      C
Sbjct: 545 LLEPNLQVLKLDGNPLRRVIDVKC 568


>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
 gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
          Length = 584

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/542 (52%), Positives = 384/542 (70%), Gaps = 2/542 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK AR SGSL+LSNR+LR+VP +VYK  +  G+ +KWWE VDL +L+LAHN I+ L
Sbjct: 1   MERLLKMARASGSLDLSNRNLREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNKIKLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ++L NL  + VLN+S+N+L  LP +IG L  LK+LDVS N+I+++P EIG+  +LVKF 
Sbjct: 61  SQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFL 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQ+KELPS++G C++L++ K SNN +T LP+ LA CS++  L +EGNK+T   ++L 
Sbjct: 121 ASNNQIKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPSS+  C  L E Y G+N
Sbjct: 181 HSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSNN+LSGLPPE+G M +L
Sbjct: 241 LLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLSGLPPELGFMGSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +      ++ +  A R +V+SK
Sbjct: 301 RKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARAAVSSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S++ LIL+ NKI++WP 
Sbjct: 361 ALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSMEALILADNKIQEWPG 420

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           ++  SL +L  L L  NP+  +P   F  +  LQ+LDLS  +A LP  P  S +  LQEL
Sbjct: 421 SVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLPPPPCLSLMTGLQEL 480

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTSLTELDLSDNNISALPP 538
            L R Q+   P D+ R+  LRILDLSQN++  +P+     +  +L ELDL+DNN+S LPP
Sbjct: 481 RLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPP 540

Query: 539 EL 540
           +L
Sbjct: 541 QL 542



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 42/308 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKF-------- 119
           L+VL++S+N LS LP  +G +  L+ L ++ N +  +   +  GS  AL+K+        
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAE 336

Query: 120 --------------------------DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
                                       S   L  +P ++    +L     + NCI  LP
Sbjct: 337 DGNIFGMNIQEQVVQAARAAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELP 396

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRL 212
            +++ C+ M  L +  NK+     ++ AS   L  L  ++N +  +P     ++S L  L
Sbjct: 397 PEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLL 456

Query: 213 DLHQNRI-LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEY 268
           DL      L  P  +S    L E  +    ++A+P +L ++S L  LDL  N    L + 
Sbjct: 457 DLSGVVAQLPPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQA 516

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            + +  + L  LDL++N+LS LPP++G +  TLRKL + GNPLR++R  ++   T  LL+
Sbjct: 517 SLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKELLQ 576

Query: 328 YLRSRLPE 335
           YL  +LP+
Sbjct: 577 YLHGKLPQ 584



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 42/313 (13%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N +  L  ELG L  +  L++  N+L+        L  L  LD+S+N++  L
Sbjct: 47  LHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILEL 106

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG + +L K L + N ++ L S++      A LK   + L    D  AS ++  LI+
Sbjct: 107 PVEIGNLASLVKFLASNNQIKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSR--LIS 164

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLI 409
                      LS+EG  ++  PS ++ + G +T+L+  +N+I ELP E+ +   L  L 
Sbjct: 165 -----------LSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLD 213

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           L +NKIK  P + L + S L      +N L  +P++   ++  L   DL  N        
Sbjct: 214 LHQNKIKSIPSS-LVNCSMLVEAYFGDNLLSSLPNE-IGNLQSLLTFDLHGN-------- 263

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
                           QL E P     ++ L +LDLS N+L  +P     + SL +L L+
Sbjct: 264 ----------------QLSEFPVSACSMR-LSVLDLSNNNLSGLPPELGFMGSLRKLVLT 306

Query: 530 DNNISALPPELVS 542
            N +  L   LV+
Sbjct: 307 GNPLRTLRTSLVT 319


>gi|302796795|ref|XP_002980159.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
 gi|300152386|gb|EFJ19029.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
          Length = 584

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/542 (51%), Positives = 383/542 (70%), Gaps = 2/542 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK AR SGSL+LSNR+LR+VP +VYK  +  G+ +KWWE VDL +L+LAHN I+ L
Sbjct: 1   MERLLKMARASGSLDLSNRNLREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNKIKLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ++L NL  + VLN+S+N+L  LP +IG L  LK+LDVS N+I+++P EIG+  +LVKF 
Sbjct: 61  SQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFL 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQ+KEL S++G C++L++ K SNN +T LP+ LA CS++  L +EGNK+T   ++L 
Sbjct: 121 ASNNQIKELASTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPSS+  C  L E Y G+N
Sbjct: 181 HSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSNN+LSGLPPE+G M +L
Sbjct: 241 LLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLSGLPPELGFMGSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +      ++ +  A R++V+SK
Sbjct: 301 RKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARVAVSSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S++ LIL+ NKI++WP 
Sbjct: 361 ALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSMEALILADNKIQEWPG 420

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           ++  SL +L  L L  NP+  +P   F  +  LQ+LDLS  +A L   P  S +  LQEL
Sbjct: 421 SVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLLPPPCLSLMTGLQEL 480

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTSLTELDLSDNNISALPP 538
            L R Q+   P D+ R+  LRILDLSQN++  +P+     +  +L ELDL+DNN+S LPP
Sbjct: 481 RLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPP 540

Query: 539 EL 540
           +L
Sbjct: 541 QL 542



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 42/308 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKF-------- 119
           L+VL++S+N LS LP  +G +  L+ L ++ N +  +   +  GS  AL+K+        
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAE 336

Query: 120 --------------------------DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
                                       S   L  +P ++    +L     + NCI  LP
Sbjct: 337 DGNIFGMNIQEQVVQAARVAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELP 396

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRL 212
            +++ C+ M  L +  NK+     ++ AS   L  L  ++N +  +P     ++S L  L
Sbjct: 397 PEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLL 456

Query: 213 DLHQNRI-LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEY 268
           DL      L  P  +S    L E  +    ++A+P +L ++S L  LDL  N    L + 
Sbjct: 457 DLSGVVAQLLPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQA 516

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            + +  + L  LDL++N+LS LPP++G +  TLRKL + GNPLR++R  ++   T ALL+
Sbjct: 517 SLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKALLQ 576

Query: 328 YLRSRLPE 335
           YL  +LP+
Sbjct: 577 YLHGKLPQ 584



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 42/313 (13%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N +  L  ELG L  +  L++  N+L+        L  L  LD+S+N++  L
Sbjct: 47  LHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILEL 106

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG + +L K L + N ++ L S++      A LK   + L    D  AS ++  LI+
Sbjct: 107 PVEIGNLASLVKFLASNNQIKELASTIGLCVDLAELKLSNNGLTFLPDQLASCSR--LIS 164

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLI 409
                      LS+EG  ++  PS ++ + G +T+L+  +N+I ELP E+ +   L  L 
Sbjct: 165 -----------LSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLD 213

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           L +NKIK  P + L + S L      +N L  +P++   ++  L   DL  N        
Sbjct: 214 LHQNKIKSIPSS-LVNCSMLVEAYFGDNLLSSLPNE-IGNLQSLLTFDLHGN-------- 263

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
                           QL E P     ++ L +LDLS N+L  +P     + SL +L L+
Sbjct: 264 ----------------QLSEFPVSACSMR-LSVLDLSNNNLSGLPPELGFMGSLRKLVLT 306

Query: 530 DNNISALPPELVS 542
            N +  L   LV+
Sbjct: 307 GNPLRTLRTSLVT 319


>gi|168059285|ref|XP_001781634.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666948|gb|EDQ53590.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 604

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/553 (50%), Positives = 381/553 (68%), Gaps = 13/553 (2%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           ++R++KAA++SGSLNLSNR L +VP  VY   +E G  +KWWE V++ KL ++HN+I  +
Sbjct: 7   IERLIKAAKSSGSLNLSNRGLAEVPPRVYNLLNEGGSEEKWWEVVEIHKLDISHNSIAAI 66

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            + L ++  LT LN+SHN+LS LP AIG L +LK LD+S NS++++P E+G  TALV+ +
Sbjct: 67  SDRLGDIGSLTFLNLSHNQLSFLPPAIGNLSLLKILDISGNSVVELPSELGFLTALVRLN 126

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           C+SN L +L SSLG C  L D KA NN + +LPE+L +CSK+S L++E N+L+ LS +L 
Sbjct: 127 CASNSLSKLSSSLGNCTELVDLKAHNNLLVTLPEELGNCSKLSTLNIESNRLSELSESLF 186

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++ + LTELIA +N L  +P ++G LS+LIRLDLHQNR+  +P +I+GC +L E Y+G+N
Sbjct: 187 SALSGLTELIAGRNSLTALPNSLGRLSKLIRLDLHQNRLTYLPPTIAGCVALMELYLGDN 246

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L  +P E+G L  L  LDLHSNQL E+  +AC LRLS+LDLSNN+LSGLP E+G MT+L
Sbjct: 247 LLKVVPDEIGSLKSLSNLDLHSNQLTEFSAKACLLRLSLLDLSNNNLSGLPAELGAMTSL 306

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-------------DSEASTTKED 347
           RKLLL GNP+R+LRS+LV GPTPALLKYL+SR+P+ E             +   +    D
Sbjct: 307 RKLLLVGNPMRSLRSTLVMGPTPALLKYLQSRIPQTEAEAEADEQAPATGNVFGTIGLSD 366

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            I  A+R +  SK LSL   NLS IP   WE  +IT LDLS N I+ LP EL+ C++L+ 
Sbjct: 367 QIVHASRQATASKVLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSALEV 426

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L+LS NK  +WP A+L S+ +L  L L  NP R+ P   F  +  L +LDLS   A LP 
Sbjct: 427 LMLSNNKFSEWPGAVLGSIPNLHELLLAYNPFREFPQGAFVAVAKLTVLDLSGVPARLPP 486

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
            P  + +P+LQEL L+R QL++   D+  LQ+LRILD+SQN +  IPE    L  L  LD
Sbjct: 487 PPALAEMPNLQELRLKRAQLQDFREDLKSLQKLRILDVSQNFISVIPEWVTCLARLETLD 546

Query: 528 LSDNNISALPPEL 540
           +SDNNIS LPP+L
Sbjct: 547 ISDNNISQLPPKL 559



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 194/453 (42%), Gaps = 70/453 (15%)

Query: 43  EAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSF 100
           E VDL+    AHNN+   L E+L N   L+ LN+  N+LSEL  ++   L  L  L    
Sbjct: 144 ELVDLK----AHNNLLVTLPEELGNCSKLSTLNIESNRLSELSESLFSALSGLTELIAGR 199

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           NS+  +P+ +G  + L++ D   N+L  LP ++  C+ L +    +N +  +P+++    
Sbjct: 200 NSLTALPNSLGRLSKLIRLDLHQNRLTYLPPTIAGCVALMELYLGDNLLKVVPDEIGSLK 259

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +S LD+  N+LT  S    A    L+ L  S N L+G+P  +G+++ L +L L  N + 
Sbjct: 260 SLSNLDLHSNQLTEFSAK--ACLLRLSLLDLSNNNLSGLPAELGAMTSLRKLLLVGNPMR 317

Query: 221 SIPSS-----------------------------------ISGCCSLAE----------- 234
           S+ S+                                   + G   L++           
Sbjct: 318 SLRSTLVMGPTPALLKYLQSRIPQTEAEAEADEQAPATGNVFGTIGLSDQIVHASRQATA 377

Query: 235 ---FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGL 290
                +    LS +P    + + + TLDL  NQ+K    E A    L VL LSNN  S  
Sbjct: 378 SKVLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSALEVLMLSNNKFSEW 437

Query: 291 PPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           P  + G +  L +LLL  NP R         P  A +   +  + +     A       +
Sbjct: 438 PGAVLGSIPNLHELLLAYNPFREF-------PQGAFVAVAKLTVLDLSGVPARLPPPPAL 490

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                L    +EL L+   L     ++    ++  LD+S+N I  +P  ++  A L+TL 
Sbjct: 491 AEMPNL----QELRLKRAQLQDFREDLKSLQKLRILDVSQNFISVIPEWVTCLARLETLD 546

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +S N I   P  +     +L  LK+D NPLR +
Sbjct: 547 ISDNNISQLPPKLGLLEPTLKHLKVDGNPLRSI 579



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 48/266 (18%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++    LSE+P A  E   + +LD+S N I  +P E+   +AL     S+N+  E P 
Sbjct: 380 VLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSALEVLMLSNNKFSEWPG 439

Query: 132 S-LGRCLNLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           + LG   NL +   + N     P+      +K++ LD+ G    +     +A    L EL
Sbjct: 440 AVLGSIPNLHELLLAYNPFREFPQGAFVAVAKLTVLDLSGVPARLPPPPALAEMPNLQEL 499

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              +  L    E + SL +L  LD+ QN I  IP  ++                      
Sbjct: 500 RLKRAQLQDFREDLKSLQKLRILDVSQNFISVIPEWVT---------------------- 537

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGN 308
                                  C  RL  LD+S+N++S LPP++G +  TL+ L + GN
Sbjct: 538 -----------------------CLARLETLDISDNNISQLPPKLGLLEPTLKHLKVDGN 574

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLP 334
           PLR++R  ++   T  LL+YL+ R+P
Sbjct: 575 PLRSIRRPILEKGTKTLLQYLQDRIP 600



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V   +L +   +++AI   + + G +T L+LS N +  LPP + + + L+ L +S N + 
Sbjct: 51  VEIHKLDISHNSIAAISDRLGDIGSLTFLNLSHNQLSFLPPAIGNLSLLKILDISGNSVV 110

Query: 417 DWPD--AILTSLSSLSC--------------------LKLDNNPLRQVPSDGFKDIPMLQ 454
           + P     LT+L  L+C                    LK  NN L  +P +   +   L 
Sbjct: 111 ELPSELGFLTALVRLNCASNSLSKLSSSLGNCTELVDLKAHNNLLVTLPEE-LGNCSKLS 169

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
            L++  N  S      FS+L  L EL   R  L   P  + RL +L  LDL QN L  +P
Sbjct: 170 TLNIESNRLSELSESLFSALSGLTELIAGRNSLTALPNSLGRLSKLIRLDLHQNRLTYLP 229

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                  +L EL L DN +  +P E+ S+
Sbjct: 230 PTIAGCVALMELYLGDNLLKVVPDEIGSL 258



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 119/288 (41%), Gaps = 62/288 (21%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ L+LS+N LS LPP IG ++ L+ L ++GN +  L S L                   
Sbjct: 76  LTFLNLSHNQLSFLPPAIGNLSLLKILDISGNSVVELPSEL------------------- 116

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                       +T   RL+  S  LS    +L           E+  L    N +  LP
Sbjct: 117 ----------GFLTALVRLNCASNSLSKLSSSLG-------NCTELVDLKAHNNLLVTLP 159

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            EL +C+ L TL +  N++ +  +++ ++LS L+ L    N L  +P +    +  L  L
Sbjct: 160 EELGNCSKLSTLNIESNRLSELSESLFSALSGLTELIAGRNSLTALP-NSLGRLSKLIRL 218

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL---------- 505
           DL  N +  LP  P  +    L ELYL    L+  P +I  L+ L  LDL          
Sbjct: 219 DLHQNRLTYLP--PTIAGCVALMELYLGDNLLKVVPDEIGSLKSLSNLDLHSNQLTEFSA 276

Query: 506 ------------SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
                       S N+L  +P     +TSL +L L  N + +L   LV
Sbjct: 277 KACLLRLSLLDLSNNNLSGLPAELGAMTSLRKLLLVGNPMRSLRSTLV 324


>gi|413939568|gb|AFW74119.1| hypothetical protein ZEAMMB73_915670 [Zea mays]
          Length = 412

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 205/403 (50%), Positives = 254/403 (63%), Gaps = 75/403 (18%)

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           +  SWTMLTEL    NL     E+  S  R                              
Sbjct: 1   MFVSWTMLTEL----NLARYSKESTYSHPR------------------------------ 26

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI---- 294
           NN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+    
Sbjct: 27  NNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELDHRS 86

Query: 295 ----------------------------------GKMTTLRKLLLTGNPLRTLRSSLVNG 320
                                             GKMTTLRKLLLTGNP+RTLRSSLV+G
Sbjct: 87  DSCMRDKCMLWPLRTSYSLWYCLTENSDNPCATQGKMTTLRKLLLTGNPMRTLRSSLVSG 146

Query: 321 PTPALLKYLRSRLPENED---SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           PT  LLKYLRSRL  +E+   S ++ TK+D I  A RLS++SKEL L G+ ++++P+  W
Sbjct: 147 PTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAW 206

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           E  ++ KLDLS+NSI++LP ELS C+SLQ+L+LS NKIK WP  +++SL  LS LKLDNN
Sbjct: 207 ETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDNN 266

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           PL ++ S     +  L++LDLS N ++LPE    S+LP LQELYLRRM+L E P  +L L
Sbjct: 267 PLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELYLRRMKLHEFPNGLLGL 326

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LRILDLSQN L ++PEG KN T+L ELDLSDNNI+ALP EL
Sbjct: 327 KLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAEL 369



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 46/264 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +PAA  E   +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 191 LDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHT 250

Query: 133 LGRCLN-LSDFKASNNCITSLPE-DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L  LS  K  NN +  +   DL   SK+  LD+ GN   +   + +++   L EL 
Sbjct: 251 VVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELY 310

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+  P  +  L  L  LDL QN + ++P  I    +L E  + +N ++ALPAELG
Sbjct: 311 LRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELG 370

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L                                               L+ L L GNPL
Sbjct: 371 LLE--------------------------------------------ANLQVLKLDGNPL 386

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R++R +L+   T A+LKYL+ +LP
Sbjct: 387 RSIRRTLLERGTKAVLKYLKEKLP 410



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 164/399 (41%), Gaps = 94/399 (23%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDL--- 156
           N +  IP +IG+ + L   D  SNQLKE P  +G C L LS    SNN ++ LP +L   
Sbjct: 28  NLLSSIPADIGTLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSLSGLPAELDHR 85

Query: 157 --------------------------------ADCSKMS---KLDVEGNKLTVLSNNLIA 181
                                           A   KM+   KL + GN +  L ++L++
Sbjct: 86  SDSCMRDKCMLWPLRTSYSLWYCLTENSDNPCATQGKMTTLRKLLLTGNPMRTLRSSLVS 145

Query: 182 SWT-----MLTELIASKNLLNGMPET------IGSLSRL----IRLDLHQNRILSIPSSI 226
             T      L   ++S    +G   T      I +  RL      LDL    + S+P++ 
Sbjct: 146 GPTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAA 205

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
                + +  +  N++  LP EL   S L +L L +N++K +   V +    LS L L N
Sbjct: 206 WETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDN 265

Query: 285 NSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           N L  +   ++  ++ L  L L+GN      S+L   P P+ +    S LP+        
Sbjct: 266 NPLVEISSTDLVPLSKLEVLDLSGNA-----SAL---PEPSAV----SALPQ-------- 305

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                           +EL L  M L   P+ +     +  LDLS+N +  +P  + +  
Sbjct: 306 ---------------LQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFT 350

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +L  L LS N I   P  +    ++L  LKLD NPLR +
Sbjct: 351 ALIELDLSDNNITALPAELGLLEANLQVLKLDGNPLRSI 389



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LP L  L +   KL E P  +  L +L+ LD+S N +  +P+ I + TAL++ D S N +
Sbjct: 303 LPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNI 362

Query: 127 KELPSSLG 134
             LP+ LG
Sbjct: 363 TALPAELG 370


>gi|255085884|ref|XP_002505373.1| predicted protein [Micromonas sp. RCC299]
 gi|226520642|gb|ACO66631.1| predicted protein [Micromonas sp. RCC299]
          Length = 621

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 303/567 (53%), Gaps = 33/567 (5%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +D++L +A+++G LNLS+R + ++P  V+ +  E+G G  WWE  +L  L+ +HN+I +L
Sbjct: 18  VDKLLLSAQSTGVLNLSDRGMTEIPRAVF-DAPESG-GPAWWEVKELTALVASHNSIAQL 75

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ED+  L  L  L++ HN+L  LPA       L+SLDVS N +  +PD +   T L   +
Sbjct: 76  PEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVSDNKLRMLPDALPVET-LAALN 134

Query: 121 CSSN-QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
            S N +L +LP S+G C  L++ + +   +T LP  +  C+ +  LD+  N++  L + +
Sbjct: 135 VSRNPKLFKLPESIGACDRLAELRVAGCALTELPRAIDGCTSLVTLDISNNRIGTLPDGM 194

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                 L +L  S N L  +P  +G+ + L RLD  +NRI  +P SISGC +LAE ++G 
Sbjct: 195 T-RLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIFIGR 253

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ALP  LG  + L TLD+ SN+L E     A    L  +D S N ++ + PE+G+ T
Sbjct: 254 NELTALPDALGTCAALATLDVSSNRLTELPSSLAAGAPLRTVDASGNDVTRVAPELGRCT 313

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS--------EASTTKEDLIT 350
           +LR+L L GNP+R++R ++++GP   LL +LRS+L   E          E++T  ED   
Sbjct: 314 SLRRLALEGNPIRSIRQNILSGPIGDLLAHLRSKLGAEETGVGAAFRGDESTTRAEDAAR 373

Query: 351 MATRLSVTSKE------LSLEGMNLSAIPSEIWE--AGEITKLDLSRNSIQEL--PPELS 400
                +  + E      +SL G  L ++P + W   A  +T +DL  N ++      E+ 
Sbjct: 374 AVATAARVASEGGRASGVSLRGQRLESLPDDFWSVVARGVTSVDLGENGLRGGVDAEEVE 433

Query: 401 SCASLQTLILSRNKIKDWP----DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            C  L+TL+L  N ++ WP    +    SL+ L+ L  +      +P   F     L+ L
Sbjct: 434 RCDGLETLLLDGNALEKWPLPCGEGRPLSLTELN-LAGNKGLSAAMPPSAFSRASRLRKL 492

Query: 457 DLSYNIASLPENPPFSSLP---HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           D++  I   P   P    P    L EL   +  L   P ++  L++LR+L L+ N + ++
Sbjct: 493 DVT-GIVFQPSRGPNLLRPLAETLTELRWGKAMLDAIPDEVFDLRRLRVLRLNDNHIGAL 551

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L  L ELDL++N++  LPPEL
Sbjct: 552 SPAVARLVELDELDLTNNDLGTLPPEL 578



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 173/408 (42%), Gaps = 50/408 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++ N +  L  D+     LT L+   N+++ +P +I     L  + +  N +  +
Sbjct: 200 LRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIFIGRNELTAL 259

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G+  AL   D SSN+L ELPSSL     L    AS N +T +  +L  C+ + +L 
Sbjct: 260 PDALGTCAALATLDVSSNRLTELPSSLAAGAPLRTVDASGNDVTRVAPELGRCTSLRRLA 319

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSL------------------- 206
           +EGN +  +  N+++    + +L+A      G  ET +G+                    
Sbjct: 320 LEGNPIRSIRQNILSG--PIGDLLAHLRSKLGAEETGVGAAFRGDESTTRAEDAARAVAT 377

Query: 207 --------SRLIRLDLHQNRILSIPSSISGCCS--LAEFYMGNNALSAL--PAELGKLSK 254
                    R   + L   R+ S+P       +  +    +G N L       E+ +   
Sbjct: 378 AARVASEGGRASGVSLRGQRLESLPDDFWSVVARGVTSVDLGENGLRGGVDAEEVERCDG 437

Query: 255 LGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSL--SGLPPE-IGKMTTLRKLLLTGN 308
           L TL L  N L+++   C E   L L+ L+L+ N    + +PP    + + LRKL +TG 
Sbjct: 438 LETLLLDGNALEKWPLPCGEGRPLSLTELNLAGNKGLSAAMPPSAFSRASRLRKLDVTGI 497

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
             +  R        P LL+ L   L E    +A     D I          + L L   +
Sbjct: 498 VFQPSRG-------PNLLRPLAETLTELRWGKAML---DAIPDEVFDLRRLRVLRLNDNH 547

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           + A+   +    E+ +LDL+ N +  LPPEL     L+ L +  N ++
Sbjct: 548 IGALSPAVARLVELDELDLTNNDLGTLPPELGLLTGLRWLGVEGNMLR 595



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 150/368 (40%), Gaps = 94/368 (25%)

Query: 181 ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           A W +  LT L+AS N +  +PE +  L+ L +LDL  N++ S+P++      L    + 
Sbjct: 55  AWWEVKELTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVS 114

Query: 239 NNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
           +N L  LP  L  +  L  L++  N    +L E  + AC  RL+ L ++  +L+ LP  I
Sbjct: 115 DNKLRMLPDAL-PVETLAALNVSRNPKLFKLPES-IGACD-RLAELRVAGCALTELPRAI 171

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
              T+L  L ++ N + TL   +                                   TR
Sbjct: 172 DGCTSLVTLDISNNRIGTLPDGM-----------------------------------TR 196

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L+ + ++L + G  L+A+P ++     +T+LD   N I  +PP +S C++L  + + RN+
Sbjct: 197 LA-SLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIFIGRNE 255

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           +   PDA+ T  +                         L  LD+S N             
Sbjct: 256 LTALPDALGTCAA-------------------------LATLDVSSN------------- 277

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
                      +L E P+ +     LR +D S N +  +       TSL  L L  N I 
Sbjct: 278 -----------RLTELPSSLAAGAPLRTVDASGNDVTRVAPELGRCTSLRRLALEGNPIR 326

Query: 535 ALPPELVS 542
           ++   ++S
Sbjct: 327 SIRQNILS 334



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 94/195 (48%), Gaps = 22/195 (11%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTM---------LTEL--IASKNLLNGMPETIGS- 205
           D  ++ + D  G +  +L  N +  W +         LTEL    +K L   MP +  S 
Sbjct: 428 DAEEVERCD--GLETLLLDGNALEKWPLPCGEGRPLSLTELNLAGNKGLSAAMPPSAFSR 485

Query: 206 LSRLIRLDLHQNRILSIPSSISGCC-----SLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            SRL +LD+    I+  PS           +L E   G   L A+P E+  L +L  L L
Sbjct: 486 ASRLRKLDVTG--IVFQPSRGPNLLRPLAETLTELRWGKAMLDAIPDEVFDLRRLRVLRL 543

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + N +        +L  L  LDL+NN L  LPPE+G +T LR L + GN LR +R  ++ 
Sbjct: 544 NDNHIGALSPAVARLVELDELDLTNNDLGTLPPELGLLTGLRWLGVEGNMLRMIRRPVIE 603

Query: 320 GPTPALLKYLRSRLP 334
             T ALL+YLR +LP
Sbjct: 604 RGTKALLEYLRDKLP 618


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 196/570 (34%), Positives = 305/570 (53%), Gaps = 35/570 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLI 51
           + ILK  R SG LNLS RSL +VP  V+K N D   E          ++WWE VDL KLI
Sbjct: 31  ETILKQGRKSGQLNLSGRSLTEVPQSVWKINIDVPKESSNISLGTTDERWWEQVDLSKLI 90

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           LA N +  L ED+  LP LTVL+V  N+L+ LP A+ +L  L+ L++S NS+  +P+ I 
Sbjct: 91  LASNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESIC 150

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL+ LP  +GR   L +  AS+N + +LP  +    ++ K ++  N 
Sbjct: 151 QLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKFNMSNNN 210

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L V+ +  I+    L  L A+ N L+ +P+ +G L++L +L L  NR+  +P S+  C +
Sbjct: 211 LNVIVHE-ISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLP-SLQHCTA 268

Query: 232 LAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           L E ++GNNA+  L  E L ++  +  LDL  N+L +   E   L+ L  LDL+NN++S 
Sbjct: 269 LKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISA 328

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS------EAST 343
           LP E+G +  L+ ++L GNPL+++R  ++   T  L KYLRSR+ E+  +      ++S 
Sbjct: 329 LPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSK 388

Query: 344 TKEDLITMAT-----RLSVTSKELSLEGMNLSAIPSEIW---EAGEITKLDLSRNSIQEL 395
               ++  A+      L  +SK L      ++AIP E+W   ++G +T ++ S+N + + 
Sbjct: 389 GTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQY 448

Query: 396 PPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           P ++ S   SL  L LS NK+    DA +  LS L  L L  N L  +P++   +   L+
Sbjct: 449 PKQIESLKDSLCELNLSFNKLTTI-DASIGCLSRLVMLDLGGNQLLSLPAE-LSNASSLR 506

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQS 512
            L +S+N   S+P      SLP L+ +     Q+ E     L+ L QL  LDL  N ++ 
Sbjct: 507 ELVISFNRFTSIPS--VVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIRQ 564

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +P     +T L  L L  N I    P ++S
Sbjct: 565 VPPELGLVTQLRSLQLEGNAIRQPRPAILS 594



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 170/341 (49%), Gaps = 53/341 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L L +N I+ L E+ LR +  ++VL++  N+L+++P+ I  L ML+ LD++ N+I  
Sbjct: 269 LKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISA 328

Query: 106 IPDEIGSATALVKFDCSSNQLKEL------------------------PSSLGRCLN--- 138
           +P E+G+   L       N LK +                        P++    +    
Sbjct: 329 LPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSK 388

Query: 139 -----------------LSDFKA---SNNCITSLPEDL---ADCSKMSKLDVEGNKLTVL 175
                            +S  KA   S   +T++P++L   A    ++ ++   N+LT  
Sbjct: 389 GTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQY 448

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
              + +    L EL  S N L  +  +IG LSRL+ LDL  N++LS+P+ +S   SL E 
Sbjct: 449 PKQIESLKDSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLREL 508

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPE 293
            +  N  +++P+ +  L  L  +   SNQ+ E   +  +   +L+ LDL NN +  +PPE
Sbjct: 509 VISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIRQVPPE 568

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +G +T LR L L GN +R  R ++++  T A+L+YLR R+P
Sbjct: 569 LGLVTQLRSLQLEGNAIRQPRPAILSKGTLAILEYLRGRIP 609



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 178/404 (44%), Gaps = 54/404 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L   HN +  L +DL +L  L  L + HN+L+ LP+ +     LK L +  N+I  +
Sbjct: 224 LRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLPS-LQHCTALKELHLGNNAIQGL 282

Query: 107 PDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +E +    ++   D   N+L ++PS +     L     +NN I++LP +L     +  +
Sbjct: 283 SEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISALPYELGTLPNLKSI 342

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET------------------IGSLS 207
            ++GN L  +  ++I   T   EL   K L + M E+                  +G  S
Sbjct: 343 VLDGNPLKSIRRDIIMRGT--NEL--KKYLRSRMAESAPTAPQSAVQSSKGTSGIVGGAS 398

Query: 208 RLI---------RLDLHQNRILSIPSSI-----SGCCSLAEFYMGNNALSALPAELGKLS 253
             +          LD  + ++ +IP  +     SG  ++  F    N L+  P ++  L 
Sbjct: 399 SGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNF--SKNQLTQYPKQIESLK 456

Query: 254 -KLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  N+L        C  RL +LDL  N L  LP E+   ++LR+L+++ N   
Sbjct: 457 DSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRFT 516

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++ S + + P   ++    +++ E +    +   + L  +AT        L L+  ++  
Sbjct: 517 SIPSVVYSLPCLEIILAGSNQIAEID----AQGLKSLAQLAT--------LDLQNNDIRQ 564

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P E+    ++  L L  N+I++  P + S  +L  L   R +I
Sbjct: 565 VPPELGLVTQLRSLQLEGNAIRQPRPAILSKGTLAILEYLRGRI 608


>gi|156404169|ref|XP_001640280.1| predicted protein [Nematostella vectensis]
 gi|156227413|gb|EDO48217.1| predicted protein [Nematostella vectensis]
          Length = 602

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 192/558 (34%), Positives = 287/558 (51%), Gaps = 35/558 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG--------DKWWEAVDLQKLIL 52
           D +LK  R SG LNLSNR L +VP +V++ N D   E         D+WW+ VDL KLIL
Sbjct: 25  DAVLKQGRKSGQLNLSNRGLTEVPEKVWRINLDVPEEAKSVSLDCEDRWWDQVDLTKLIL 84

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A N++ ++  D+ NLP L +L++  N L+ LP  IG L  L+ L++  N I  +P  +  
Sbjct: 85  ASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNLGHNKISSLPMSMAQ 144

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
             +L       N  K L   LG   NL +   S N ++SLP  LA    +  L++  N L
Sbjct: 145 LESLCSLKLEHNSFKSLECWLGSLRNLEELDVSYNMVSSLPS-LAGLKHLRTLNLSNNAL 203

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
            +L          L +L  S N +   P  + ++  L RLD  QN + S+P S+  C SL
Sbjct: 204 EMLPPEF-DHLQALDDLNISSNKICNFPGKLYNMKSLRRLDCRQNHLTSVP-SVGQCPSL 261

Query: 233 AEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
            E Y+  N ++ L ++     S L  LDLH N L     +   LR L  LDL+NN +SGL
Sbjct: 262 KELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGL 321

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS----EASTTKE 346
           P +IG M+ L+ L+L GNPLR LR  +V   T A++K+L+SR+P+++ +    +AS    
Sbjct: 322 PYKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAPL 381

Query: 347 DLITMATRLSVT-------SKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELP 396
             ++M +  +V        +K L+  G   ++IP E+ EA    E+  +D S+N + +LP
Sbjct: 382 PSVSMGSSGAVVDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNMLTDLP 441

Query: 397 PELSS-CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +++  +S+  L L  NKI   P  I  S + L  L L NN L  +P DGF  +  L+ 
Sbjct: 442 ERITALSSSVSDLNLGFNKITSLPSGI-CSFTQLEFLDLRNNQLSSLP-DGFASLRSLRE 499

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSI 513
           + +SYN  + LP  P   S+  L+ L     Q+     D +LR+  L  LDL  N++  +
Sbjct: 500 IIISYNRFSCLP--PVLYSMTSLRTLLACDNQIAVIDVDGLLRMSVLETLDLQNNNISQV 557

Query: 514 PEGFKNLTSLTELDLSDN 531
           P    N+  L  L L  N
Sbjct: 558 PPELGNVRGLKALQLGGN 575



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 45/347 (12%)

Query: 27  EVYKNFDEAGEGD-KWWEAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELP 84
           E+Y  +++  E D K +       ++  H+N+   + ED+  L  L  L++++N +S LP
Sbjct: 263 ELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLP 322

Query: 85  AAIGELHMLKSLDVSFN---------------SIMK-----IPDEIGSATALVKFDCSSN 124
             IG +  LKSL ++ N               +IMK     IPD+ G+       D    
Sbjct: 323 YKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGAT------DQPDA 376

Query: 125 QLKELPS-SLGRCLNLSDFKASNNCIT---------SLPEDL---ADCSKMSKLDVEGNK 171
            +  LPS S+G    + D     +  T         S+P ++   A  S++  +D   N 
Sbjct: 377 SVAPLPSVSMGSSGAVVDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNM 436

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L   + A  + +++L    N +  +P  I S ++L  LDL  N++ S+P   +   S
Sbjct: 437 LTDLPERITALSSSVSDLNLGFNKITSLPSGICSFTQLEFLDLRNNQLSSLPDGFASLRS 496

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL---DLSNNSLS 288
           L E  +  N  S LP  L  ++ L TL    NQ+    V+   LR+SVL   DL NN++S
Sbjct: 497 LREIIISYNRFSCLPPVLYSMTSLRTLLACDNQIAVIDVDGL-LRMSVLETLDLQNNNIS 555

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            +PPE+G +  L+ L L GNP RT R++++   T ALL+YLR R+P 
Sbjct: 556 QVPPELGNVRGLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRIPR 602



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 185/451 (41%), Gaps = 85/451 (18%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK  RT   LNLSN +L  +P E    FD         +A+D   L ++ N I      L
Sbjct: 190 LKHLRT---LNLSNNALEMLPPE----FDH-------LQALD--DLNISSNKICNFPGKL 233

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSS 123
            N+  L  L+   N L+ +P+ +G+   LK L +++N I ++  ++ +  + L   D   
Sbjct: 234 YNMKSLRRLDCRQNHLTSVPS-VGQCPSLKELYLAYNKIAELDSKVFAGYSGLTVLDLHD 292

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  +P  +    +L     +NN I+ LP  + + S +  L + GN L  L  +++   
Sbjct: 293 NLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMRG 352

Query: 184 TM-----LTELIASKNLLNGMPE---------TIGSLSRLIRLDLHQ-----------NR 218
           T      L   I   +     P+         ++GS   ++  D+H             +
Sbjct: 353 TQAIMKHLKSRIPDDDGATDQPDASVAPLPSVSMGSSGAVV--DMHTLGHTKTLNYSGKK 410

Query: 219 ILSIPSSISGCCSLAEFY---MGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQ 274
             SIP  +      +E        N L+ LP  +  LS  +  L+L  N++       C 
Sbjct: 411 SASIPVEVLEAAVTSEVKTVDFSKNMLTDLPERITALSSSVSDLNLGFNKITSLPSGICS 470

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             +L  LDL NN LS LP     + +LR+++++ N    L         P +L  +    
Sbjct: 471 FTQLEFLDLRNNQLSSLPDGFASLRSLREIIISYNRFSCL---------PPVLYSM---- 517

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                    T+   L+    +++V    + ++G+   ++         +  LDL  N+I 
Sbjct: 518 ---------TSLRTLLACDNQIAV----IDVDGLLRMSV---------LETLDLQNNNIS 555

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           ++PPEL +   L+ L L  N  +    AIL 
Sbjct: 556 QVPPELGNVRGLKALQLGGNPFRTPRAAILA 586


>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 623

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/571 (32%), Positives = 283/571 (49%), Gaps = 62/571 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFD-EAGEGDKWWEAVDLQKLILAHNNIEK---- 59
           LK A+ +G + L N  LR +P   +   +   GE D+WW+   + ++ L +N IE+    
Sbjct: 35  LKQAQRTGHMRLCNSGLRAIPTNAFLIHEVRFGEDDQWWDRTPISRIDLTNNEIEEISTA 94

Query: 60  -LKEDLRNLP--------LLTVLN---VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
            L +D    P        L T +N    + NK+  +   + +L  L +LD+S N + ++P
Sbjct: 95  NLAQDDEAKPAKRKHLQELWTEVNTFCAAQNKIVSISPQLFQLENLTTLDLSHNKLARLP 154

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           DE+ +A  LV     +N+L  LP +LG    LS+   ++N +  LP  +A   ++  LD+
Sbjct: 155 DEVANARQLVHLLLQNNELCCLPEALGCLSALSNLNLAHNRLVELPATMALLPRIEVLDL 214

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-----ETIGSLSRLIRLDLHQNRILSI 222
             NKLT L       W  L EL    N L G+P     +       L RLDL QNR+  +
Sbjct: 215 SANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQNRLREL 274

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRLSVLD 281
           PS ++   SL E Y   N L +LPAEL  L+ L  LDL  N L  +  E    L L +LD
Sbjct: 275 PSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSNLALQILD 334

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS NSL  +PP +G+MTTL+ L + GNPL   +  +++  T  +LKYLR RLP ++ ++ 
Sbjct: 335 LSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLPPDDQAKQ 394

Query: 342 STTKEDLITMATR------LSVTSK-----ELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           + T   LI  +        L +++K      LSL    L+A+P++I   G + +LDL  N
Sbjct: 395 TATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPAQIEAFGRLRRLDLGDN 454

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP EL  C  L+ LIL +N + + P  +                          ++
Sbjct: 455 KLTALPLELGKCVLLEELILQKNSLTEIPAVVF-------------------------EL 489

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L  LD+S+N I  LP  P  + L  L  L  R+  +R  P+++  L +L +LD+  N 
Sbjct: 490 TRLTELDISFNRITVLP--PGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNK 547

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++++      LTSL  LDL  N+I  +PP+L
Sbjct: 548 IETLDVELTKLTSLRALDLGSNDIVTVPPQL 578



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 38/359 (10%)

Query: 12  GSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLK 61
             L+LS   LR++P++V  + +  E        +++         L  L L  N++   K
Sbjct: 262 ARLDLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFK 321

Query: 62  -EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-------------- 106
            E   NL L  +L++S N L  +P A+G +  LK+L ++ N +M                
Sbjct: 322 KEHFSNLAL-QILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILK 380

Query: 107 -------PDEIGSATALVKFDCSSNQLKELPSSL---GRCLNLSDFKASNNCITSLPEDL 156
                  PD+    TA        +   E   SL    +  + S+   + N +T+LP  +
Sbjct: 381 YLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPAQI 440

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               ++ +LD+  NKLT L   L     +L ELI  KN L  +P  +  L+RL  LD+  
Sbjct: 441 EAFGRLRRLDLGDNKLTALPLEL-GKCVLLEELILQKNSLTEIPAVVFELTRLTELDISF 499

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NRI  +P  I+   SL       N++ ALP+EL  L KL  LD+  N+++   VE  +L 
Sbjct: 500 NRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKIETLDVELTKLT 559

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            L  LDL +N +  +PP++G MT+LR L L GN +R +R +++   T +LL+YLR+R+P
Sbjct: 560 SLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAILQQGTSSLLEYLRNRIP 618



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 191/451 (42%), Gaps = 74/451 (16%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIAS---------------WTMLTELIASKNLLNGMPET 202
           D + +S++D+  N++  +S   +A                WT +    A++N +  +   
Sbjct: 74  DRTPISRIDLTNNEIEEISTANLAQDDEAKPAKRKHLQELWTEVNTFCAAQNKIVSISPQ 133

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +  L  L  LDL  N++  +P  ++    L    + NN L  LP  LG LS L  L+L  
Sbjct: 134 LFQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNELCCLPEALGCLSALSNLNLAH 193

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNG 320
           N+L E       L R+ VLDLS N L+ LP E      TLR+L L GN L  L +     
Sbjct: 194 NRLVELPATMALLPRIEVLDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKD 253

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
           PT       R  L +N   E  +           L  + +EL      L ++P+E+    
Sbjct: 254 PTAGWPLLARLDLSQNRLRELPSD--------VALFYSLRELYAAKNLLQSLPAELNTLT 305

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL- 439
            +  LDL  NS+     E  S  +LQ L LS N +K  P A L  +++L  L +  NPL 
Sbjct: 306 SLAILDLKENSLTHFKKEHFSNLALQILDLSLNSLKTIPPA-LGRMTTLKTLAIAGNPLM 364

Query: 440 ---RQVPSDGFKDI-------------------PMLQILDLSYN--IASLPENPPFSS-- 473
              R V   G  +I                       I++ +YN    SL  +  FSS  
Sbjct: 365 GFKRGVIDQGTDEILKYLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPS 424

Query: 474 -----------LPHLQELY--LRRM-----QLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                      LP   E +  LRR+     +L   P ++ +   L  L L +NSL  IP 
Sbjct: 425 NLSLAKNGLTALPAQIEAFGRLRRLDLGDNKLTALPLELGKCVLLEELILQKNSLTEIPA 484

Query: 516 GFKNLTSLTELDLSDNNISALPP---ELVSV 543
               LT LTELD+S N I+ LPP   +LVS+
Sbjct: 485 VVFELTRLTELDISFNRITVLPPGIAQLVSL 515



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 59/137 (43%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +E   L +L ++ N I  L   +  L  LT+L    N +  LP+ +  L  L  LDV FN
Sbjct: 487 FELTRLTELDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFN 546

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I  +  E+   T+L   D  SN +  +P  LG   +L       N I ++   +     
Sbjct: 547 KIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAILQQGT 606

Query: 162 MSKLDVEGNKLTVLSNN 178
            S L+   N++   + N
Sbjct: 607 SSLLEYLRNRIPTTTTN 623


>gi|384249477|gb|EIE22958.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
          Length = 521

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 186/475 (39%), Positives = 265/475 (55%), Gaps = 14/475 (2%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +  N+L ELPA I  L  LK L VS N + K+PD +    +L   +C+ N L  LP++LG
Sbjct: 10  IHQNELEELPAHIAALTSLKRLAVSGNRLSKLPDTVAEIHSLRHLECAGNALAVLPAALG 69

Query: 135 -RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  +L    AS+N +T LP   A  + +  L+V  N+L+ +   ++     LT L  S+
Sbjct: 70  SQQPHLQHVDASDNALTQLPGGFAAAAGLLTLNVSSNRLSSVPAGMLCGLRSLTSLNLSQ 129

Query: 194 NLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           NL+ G +PE I  LSRL  LD+ +N++ ++P  + GC +L E ++G N +  LP  L +L
Sbjct: 130 NLIGGCLPEDISCLSRLSLLDVSRNKMTALPDGLGGCSALVELFLGYNDIEQLPPTLSQL 189

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           S L TL+L  N L+ +   AC L L++LDL++N LS LPPE+G+MTTLR L ++GNP+R 
Sbjct: 190 SALRTLELRGNMLRSFPAAACSLTLTLLDLTDNDLSTLPPELGRMTTLRALPVSGNPIRG 249

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           LR+   N P  +LL  L +RL E E  EA T        A R++  S  ++L G  L+ +
Sbjct: 250 LRT---NQPLSSLLTSLHNRL-EEEPQEAETAAASARAAAPRIAPRSAAVNLSGQQLTCV 305

Query: 373 PSEIWE-AGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           P+E+W+ A  +T LDLS N + EL  E L+ CA L+ L LSRN++ DWP      L  L+
Sbjct: 306 PAELWDSAACLTHLDLSNNQLSELLAERLAGCAQLKVLNLSRNRLTDWPLP-RNVLPLLT 364

Query: 431 CLKLDNNPLRQVPSDGFKDIPM--LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQL 487
            L L  NP     S G  D     LQ LDLS    A    N    SLP L  L L + +L
Sbjct: 365 QLDLSANPGICAISAGAFDCCAVSLQHLDLSGVPAAGGIANTMLVSLPKLATLKLAQCRL 424

Query: 488 REAPT--DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P          LR++D+S N +  +PE    L +L EL LS+N +S LPP+L
Sbjct: 425 SSFPALPPAPGGDSLRVIDVSSNQISQVPEAISALRALEELCLSNNELSGLPPKL 479



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 152/364 (41%), Gaps = 86/364 (23%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA-------------------- 86
           L +L L +N+IE+L   L  L  L  L +  N L   PAA                    
Sbjct: 169 LVELFLGYNDIEQLPPTLSQLSALRTLELRGNMLRSFPAAACSLTLTLLDLTDNDLSTLP 228

Query: 87  --IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS------------- 131
             +G +  L++L VS N I  +      ++ L       N+L+E P              
Sbjct: 229 PELGRMTTLRALPVSGNPIRGLRTNQPLSSLLTSLH---NRLEEEPQEAETAAASARAAA 285

Query: 132 ----SLGRCLNLSDFKASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTML 186
                    +NLS  +     +T +P +L D +  ++ LD+  N+L+ L    +A    L
Sbjct: 286 PRIAPRSAAVNLSGQQ-----LTCVPAELWDSAACLTHLDLSNNQLSELLAERLAGCAQL 340

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGNNALSAL 245
             L  S+N L   P     L  L +LDL  N  I +I +    CC+++  ++    LS +
Sbjct: 341 KVLNLSRNRLTDWPLPRNVLPLLTQLDLSANPGICAISAGAFDCCAVSLQHLD---LSGV 397

Query: 246 PAELG-------KLSKLGTL-------------------------DLHSNQLKEYCVEAC 273
           PA  G        L KL TL                         D+ SNQ+ +      
Sbjct: 398 PAAGGIANTMLVSLPKLATLKLAQCRLSSFPALPPAPGGDSLRVIDVSSNQISQVPEAIS 457

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            LR L  L LSNN LSGLPP++G +   L  L L GNPLR++R  ++   T A+L+YLR 
Sbjct: 458 ALRALEELCLSNNELSGLPPKLGLLAPKLHVLALEGNPLRSIRRPILERGTQAVLEYLRG 517

Query: 332 RLPE 335
           R+ E
Sbjct: 518 RIVE 521



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 4/188 (2%)

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           +++    L +    L  +P+ I     + +L +S N + +LP  ++   SL+ L  + N 
Sbjct: 1   MAINGGTLWIHQNELEELPAHIAALTSLKRLAVSGNRLSKLPDTVAEIHSLRHLECAGNA 60

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           +   P A+ +    L  +   +N L Q+P  GF     L  L++S N ++S+P       
Sbjct: 61  LAVLPAALGSQQPHLQHVDASDNALTQLPG-GFAAAAGLLTLNVSSNRLSSVPAG-MLCG 118

Query: 474 LPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           L  L  L L +  +    P DI  L +L +LD+S+N + ++P+G    ++L EL L  N+
Sbjct: 119 LRSLTSLNLSQNLIGGCLPEDISCLSRLSLLDVSRNKMTALPDGLGGCSALVELFLGYND 178

Query: 533 ISALPPEL 540
           I  LPP L
Sbjct: 179 IEQLPPTL 186


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 189/563 (33%), Positives = 298/563 (52%), Gaps = 57/563 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +++AAR SG LNL+ R L +VP  V++ N D   EA      G  D+WWE  DL KLILA
Sbjct: 31  LIRAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNLSFGAADRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +  L ED+R LP LTVL+V  N+L+ LP+A+G+L  L+ LDVS N +  IP+E+   
Sbjct: 91  SNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L       N+L  LP   G+ ++L +   SNN +T +P+  A    + +L++  N+L 
Sbjct: 151 SHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  + I++   L +L  +KN L  +P  + S++ L +L L +N++ S+P  +  C  L 
Sbjct: 211 DLPAD-ISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLP-ELPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E + G N +  L AE L  L+ L  L+L  N++K    E   L +L  LDL+NN +S LP
Sbjct: 269 ELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRSR+   +D +AS  +E  +T 
Sbjct: 329 YTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRI---QDDKASPNEEPPVTA 385

Query: 352 AT-----RLSV----TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPEL 399
            T     R+++    T K L      ++ IP +++ A     +T ++ S+N +  +PP +
Sbjct: 386 MTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRI 445

Query: 400 SSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
                S+  +    NKI       L +L  L+ L + NN L  +P +  + +  LQ+++L
Sbjct: 446 VELKDSVCDVNFGFNKISSV-SLELCTLHKLTHLDIRNNVLTSLPEE-MEALTRLQVINL 503

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGF 517
           S+N                        + +  P+ + R+  L  + LS N + SI P   
Sbjct: 504 SFN------------------------RFKVFPSVLYRMLALETILLSNNQVGSIDPLQL 539

Query: 518 KNLTSLTELDLSDNNISALPPEL 540
           K +  L  LDL +N++  +PPEL
Sbjct: 540 KKMEQLGTLDLQNNDLLQVPPEL 562



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 48/336 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L++L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 267 LKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 326

Query: 106 IPDEIGSATALVKFDCSSNQLKEL--------PSSLGRCLN--LSDFKASNN-----CIT 150
           +P  +G+ + L       N L+ +           L + L   + D KAS N        
Sbjct: 327 LPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAM 386

Query: 151 SLPED----LADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIG 204
           +LP +    +   + +  LD    ++ V+ +++ ++     +T +  SKN L  +P  I 
Sbjct: 387 TLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIV 446

Query: 205 SLS-RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            L   +  ++   N+I S+   +     L    + NN L++LP E+  L++L  ++L  N
Sbjct: 447 ELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFN 506

Query: 264 QLKEY---------------------CVEACQLR----LSVLDLSNNSLSGLPPEIGKMT 298
           + K +                      ++  QL+    L  LDL NN L  +PPE+G   
Sbjct: 507 RFKVFPSVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCE 566

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 567 TLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 602



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 185/456 (40%), Gaps = 106/456 (23%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + + V L++L L++N++  + +    L  L  LN++ N+L +LPA I  +  L+ LD 
Sbjct: 168 DGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDC 227

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA-------------- 144
           + N +  +P E+ S  +L +     N+L+ LP  L  C  L +  A              
Sbjct: 228 TKNYLESVPSELASMASLEQLYLRKNKLRSLPE-LPSCKLLKELHAGENQIEILNAENLK 286

Query: 145 ---------------------------------SNNCITSLPEDLADCSKMSKLDVEGNK 171
                                            +NN I+ LP  L + S++  L +EGN 
Sbjct: 287 HLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNP 346

Query: 172 LTVLSNNLIASWT------MLTELIASKNLLNGMPET------------IGSLSRLIRLD 213
           L  +  +L+   T      + + +   K   N  P              + +++ L  LD
Sbjct: 347 LRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAMTLPSESRINMHAITTLKLLD 406

Query: 214 LHQNRILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYC 269
             + ++  IP  +        +       N L+A+P  + +L   +  ++   N++    
Sbjct: 407 YSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVS 466

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           +E C L +L+ LD+ NN L+ LP E+  +T L+ + L+ N  +   S L           
Sbjct: 467 LELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVLYR--------- 517

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                              ++ + T L   ++  S++       P ++ +  ++  LDL 
Sbjct: 518 -------------------MLALETILLSNNQVGSID-------PLQLKKMEQLGTLDLQ 551

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
            N + ++PPEL +C +L+TL+L  N  +    AIL 
Sbjct: 552 NNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILA 587



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 28/163 (17%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +T LD+  N +  LP  L    +LQ L +S NK+K  P+ +L  LS L  L L +N L  
Sbjct: 107 LTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELL-QLSHLKGLLLQHNELSH 165

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P DGF  +  L+ LDLS N +  +P++  F+ L +L  L L   QL++ P DI  ++ L
Sbjct: 166 LP-DGFGQLVSLEELDLSNNHLTDIPKS--FALLINLVRLNLACNQLKDLPADISAMKSL 222

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R LD ++N L+S+P                        EL S+
Sbjct: 223 RQLDCTKNYLESVPS-----------------------ELASM 242



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L +L L   QLR    D+  L  L +LD+  N L S+P     L +L +LD+S N + ++
Sbjct: 84  LTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSI 143

Query: 537 PPELVSV 543
           P EL+ +
Sbjct: 144 PEELLQL 150


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 186/554 (33%), Positives = 281/554 (50%), Gaps = 32/554 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILA 53
           ++KAAR SG LNLS R L +VP  V++ N D         + G  D+WWE  DL KLILA
Sbjct: 31  LIKAARKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED+  LP L VL++  N+++ LP AI EL  L+ L++S N I ++P+E+   
Sbjct: 91  SNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L  F    NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT
Sbjct: 151 QNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLT 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L 
Sbjct: 211 ALPTE-IGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLK 268

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L P  L  LS L  L+L  N+LK    E   L+ L  LDLSNN +  LP
Sbjct: 269 ELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL--PENEDSEASTTKEDLI 349
             +G +  L+ L L GNPLR +R  ++N  T  LLKYL+ R+  P+    EA+   +  +
Sbjct: 329 DTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDTAM 388

Query: 350 TMAT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELS 400
           T+ +         +T K L       S IP  ++ A     IT ++ S+N + E+P  + 
Sbjct: 389 TLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIV 448

Query: 401 SCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               S+  + L  NKI       L  L  L+ L + NN L  +P +  + +  LQ + LS
Sbjct: 449 EMKDSVYDVNLGFNKISSI-SLNLCMLLKLTHLDMRNNALASLPPE-MEALTRLQSIILS 506

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGF 517
           +N     P+     ++P+L+ + +   Q+    P  + ++ +L  LDL  N L  IP   
Sbjct: 507 FNRFKHFPD--VLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPAL 564

Query: 518 KNLTSLTELDLSDN 531
            N  SL  L L  N
Sbjct: 565 GNCESLRALHLEGN 578



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 209/482 (43%), Gaps = 70/482 (14%)

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I +A    + + S+  L E+P S+ R    +  +A  N      +   + + ++KL +  
Sbjct: 32  IKAARKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILAS 91

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           NKL  LS + I+    L  L    N +  +P  I  L+ L +L++  N+I  +P+ +   
Sbjct: 92  NKLQALSED-ISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHL 150

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L  F + +N L  LP  +G LS L  LD+ +N L+       QL  L   +LS+N L+
Sbjct: 151 QNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLT 210

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPENEDSEASTT 344
            LP EIGKM  LR+L  T N L  + +S+    +   L YLR    + LPE         
Sbjct: 211 ALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQL-YLRQNKLTYLPE--------- 260

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +T    L V + ++   G      P  +     ++ L+L  N ++ LP E+S    
Sbjct: 261 -LPFLTKLKELHVGNNQIQTLG------PEHLQNLSSLSVLELRYNKLKVLPKEISLLKG 313

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---------------------- 442
           L+ L LS N I   PD  L SL +L  L+LD NPLR +                      
Sbjct: 314 LERLDLSNNDIGSLPDT-LGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQT 372

Query: 443 ------------------PSDGFKD---IPMLQILDLSYNIASLPENPPFSSLPH--LQE 479
                             PSD   +   I  L+ L+     ASL     F++     +  
Sbjct: 373 PDMTTQEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITT 432

Query: 480 LYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +   + QL E P  I+ ++  +  ++L  N + SI      L  LT LD+ +N +++LPP
Sbjct: 433 VNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPP 492

Query: 539 EL 540
           E+
Sbjct: 493 EM 494



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 64/345 (18%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N I+ L  E L+NL  L+VL + +NKL  LP  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGS 326

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL-------------GRCL--NLSDFKASN--NC 148
           +PD +GS   L       N L+ +   +             GR    +++  +A+N  + 
Sbjct: 327 LPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDT 386

Query: 149 ITSLPED-------------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             +LP D             L  C K + L  E     V +    A+ + +T +  SKN 
Sbjct: 387 AMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEA----VFN---AAASSPITTVNFSKNQ 439

Query: 196 LNGMPETIGSLS-RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P  I  +   +  ++L  N+I SI  ++     L    M NNAL++LP E+  L++
Sbjct: 440 LTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTR 499

Query: 255 LGTLDLHSNQLKEY---------------------CVEACQLR----LSVLDLSNNSLSG 289
           L ++ L  N+ K +                      ++  QL+    LS LDL NN L  
Sbjct: 500 LQSIILSFNRFKHFPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQ 559

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PP +G   +LR L L GNP R  R++++   T A+L+YLRSR+P
Sbjct: 560 IPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEYLRSRIP 604



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 97/441 (21%), Positives = 188/441 (42%), Gaps = 66/441 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
            NLS+  L  +P E+   KN  +        E V         L++L L  N +  L E 
Sbjct: 202 FNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPE- 260

Query: 64  LRNLPLLTVL---NVSHNKLSEL-PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
              LP LT L   +V +N++  L P  +  L  L  L++ +N +  +P EI     L + 
Sbjct: 261 ---LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERL 317

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV--LSN 177
           D S+N +  LP +LG   NL   +   N +  +  D+ +      L     ++    ++ 
Sbjct: 318 DLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTT 377

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS---LAE 234
              A+       + S +++N       ++  L  L+  + +   IP ++    +   +  
Sbjct: 378 QEAANPPDTAMTLPSDSVINAH-----AIMTLKTLEYCEKQASLIPEAVFNAAASSPITT 432

Query: 235 FYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L+ +PA + ++   +  ++L  N++    +  C L +L+ LD+ NN+L+ LPP
Sbjct: 433 VNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPP 492

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +T L+ ++L+ N  +     L   P                             + 
Sbjct: 493 EMEALTRLQSIILSFNRFKHFPDVLYTIPN----------------------------LE 524

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T L ++S ++       S  P ++ +  +++ LDL  N + ++PP L +C SL+ L L  
Sbjct: 525 TIL-ISSNQIG------SIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEG 577

Query: 413 NKIKDWPDAILTSLSSLSCLK 433
           N  ++ P A + +  +++ L+
Sbjct: 578 NPFRN-PRATILAKGTVAILE 597



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 47/227 (20%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L +    ++++P  I E   + KL++S N I++LP EL    +L++ +L  N++++ PD+
Sbjct: 110 LDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDS 169

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-------------- 466
           I   LS L  L + NN LR V S     +  L   +LS N + +LP              
Sbjct: 170 I-GHLSILEELDVSNNCLRSV-SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDC 227

Query: 467 -----ENPPFS--SLPHLQELYLRR------------MQLRE-----------APTDILR 496
                EN P S   +  L++LYLR+             +L+E            P  +  
Sbjct: 228 TSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQN 287

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L +L+L  N L+ +P+    L  L  LDLS+N+I +LP  L S+
Sbjct: 288 LSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSL 334


>gi|224058509|ref|XP_002188403.1| PREDICTED: leucine-rich repeat-containing protein 40 [Taeniopygia
           guttata]
          Length = 605

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 292/560 (52%), Gaps = 51/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +L+ AR SG LNL+ R L  VP  V++ N D   EA      G  D+WWE  DL KLILA
Sbjct: 33  VLRLARRSGQLNLAGRGLTHVPEHVWRINLDTPEEAQQNLSFGAADRWWEQTDLTKLILA 92

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED++ LP LTVL+V  N+L+ LP+A+G+L  L+ LDVS N +  +P+E+   
Sbjct: 93  SNKLQSLSEDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSLPEELLQL 152

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L +LP  LG+ L+L +   SNN +T++P   A    + +L++  N+L 
Sbjct: 153 PHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVNLVRLNLACNQLK 212

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  +L A  + L +L  +KN L  +P  + +++ L +L L +N++ S+P  +  C  L 
Sbjct: 213 ELPADLSAMKS-LRQLDCTKNYLETVPPKLATMASLEQLYLRKNKLRSLP-ELPSCKLLK 270

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E + G N +  L AE L +LS L  L+L  N++K    E   L +L  LDL+NN +S LP
Sbjct: 271 ELHAGENQIEILNAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISRLP 330

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRS++ ++    +       +T+
Sbjct: 331 YTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDDGPGPSEEPPVTAMTL 390

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSC 402
            ++  V      T K L       + IP  +++   A  +  ++ S+N ++E+PP L   
Sbjct: 391 PSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNFSKNQLREIPPRLV-- 448

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
                      ++KD    +    + +SC+           S G   +  L  LDL  N+
Sbjct: 449 -----------ELKDSVCDVSLGFNKISCI-----------SSGLCLLQKLTHLDLRNNV 486

Query: 463 -ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
             +LPE     +L  L  + L   + +  P+ + RL  L  + LS N + SI P   K L
Sbjct: 487 LTALPEE--MEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVGSIDPVQLKGL 544

Query: 521 TSLTELDLSDNNISALPPEL 540
             L  LDL +N++  +PPEL
Sbjct: 545 DKLGTLDLQNNDLLQVPPEL 564



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 143/313 (45%), Gaps = 49/313 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI---GELHMLKSLDVSFN-- 101
           L++L LA+N+I +L   L NL  L  L +  N L  +   +   G   +LK L       
Sbjct: 316 LERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDD 375

Query: 102 ----------SIMKIPDE----IGSATALVKFDCSSNQLKELPSSLGRCLN---LSDFKA 144
                     + M +P +    I + T L   + S  Q  E+P ++   +    ++    
Sbjct: 376 GPGPSEEPPVTAMTLPSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNF 435

Query: 145 SNNCITSLPEDLADCSKMSKLDVE--GNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           S N +  +P  L +  K S  DV    NK++ +S+ L      LT L    N+L  +PE 
Sbjct: 436 SKNQLREIPPRLVEL-KDSVCDVSLGFNKISCISSGLCL-LQKLTHLDLRNNVLTALPEE 493

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + +L RL  ++L  NR    PS +    +L    + NN + ++ P +L  L KLGTLDL 
Sbjct: 494 MEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVGSIDPVQLKGLDKLGTLDLQ 553

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
                                 NN L  +PPE+G    LR LLL GNP RT R++++   
Sbjct: 554 ----------------------NNDLLQVPPELGNCENLRSLLLEGNPFRTPRAAVLAKG 591

Query: 322 TPALLKYLRSRLP 334
           T A+L+YLRSR+P
Sbjct: 592 TAAVLEYLRSRIP 604



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 28/214 (13%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           RL+  S +L+L G  L+ +P  +W     T  +  +N              L  LIL+ N
Sbjct: 35  RLARRSGQLNLAGRGLTHVPEHVWRINLDTPEEAQQNLSFGAADRWWEQTDLTKLILASN 94

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           K++   + +   L +L+ L + +N L  +PS     +  LQ LD+S+N + SLPE     
Sbjct: 95  KLQSLSEDV-QLLPALTVLDVHDNQLTSLPS-ALGQLENLQKLDVSHNKLRSLPEE--LL 150

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN------------- 519
            LPHL+ L ++  +L + P  + +L  L  LD+S N L +IP  F               
Sbjct: 151 QLPHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVNLVRLNLACNQ 210

Query: 520 ----------LTSLTELDLSDNNISALPPELVSV 543
                     + SL +LD + N +  +PP+L ++
Sbjct: 211 LKELPADLSAMKSLRQLDCTKNYLETVPPKLATM 244


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 183/534 (34%), Positives = 280/534 (52%), Gaps = 49/534 (9%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E Y+N    G  D+WWE  DL KLILA N ++ L ED++ L  LTVL+V  N+L+ 
Sbjct: 18  DTPEEAYQNLS-FGAADRWWEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTS 76

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+A+G+L  L+ LDVS N +  IP+E+     L       N+L  LP+  G+ +NL + 
Sbjct: 77  LPSALGQLENLQKLDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEEL 136

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   A    + +L++ GNKL  L  + I++   L +L  SKN L  +P  
Sbjct: 137 DLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPAD-ISAMKSLRQLDCSKNYLETVPSK 195

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           I +++ L +L L +N++ S+P   S C  L E + G N +  L AE L +L+ L  L+L 
Sbjct: 196 IATMASLEQLYLRKNKLRSLP-EFSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELR 254

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N++K    E   L +L  LDL+NN +S LP  +G ++ L+ L L GNPLRT+R  L+  
Sbjct: 255 DNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQK 314

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMAT-----RL---SVTS-KELSLEGMNLSA 371
            T  LLKYLRS++ +    E S T E  +T  T     R+   ++TS K L       + 
Sbjct: 315 GTQELLKYLRSKIQD----EPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEYSEKQAAV 370

Query: 372 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLS 427
           IP E+++A     +   + S+N + E+PP +     S+  + L  N+I       L  L 
Sbjct: 371 IPDEMFDAVRSHPVATANFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSI-SLELCVLH 429

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
            L+ L + NN L  +P +  + +  LQI++LS+N                        + 
Sbjct: 430 KLTHLDIRNNFLTSLPEE-MEALARLQIINLSFN------------------------RF 464

Query: 488 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
           +  P+ + R+  L  + LS N + SI P   KN+  L  LDL +N++  +PPEL
Sbjct: 465 KVFPSVLYRMGALETILLSNNQVGSIDPLQLKNMDKLGTLDLQNNDLLQVPPEL 518



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L+ L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 224 LKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 283

Query: 106 IPDEIGSATALVKFDCSSNQLKEL-----------------------PSSLGR----CLN 138
           +P  +G+ + L       N L+ +                       PS  G      + 
Sbjct: 284 LPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMT 343

Query: 139 L-SDFKASNNCITSL-------------PEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           L S+ + + + ITSL             P+++ D  +   ++  +   N+L+ +   ++ 
Sbjct: 344 LPSESRVNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPVATANFSKNQLSEVPPRIVE 403

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               + ++    N ++ +   +  L +L  LD+  N + S+P  +     L    +  N 
Sbjct: 404 LKDSVCDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNR 463

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
               P+ L ++  L T+ L +NQ+    ++  QL+    L  LDL NN L  +PPE+G  
Sbjct: 464 FKVFPSVLYRMGALETILLSNNQVG--SIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNC 521

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 522 ETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 558



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 199/472 (42%), Gaps = 79/472 (16%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDE-----AGEGDKWWEAVDLQKLILAHNNIEK 59
           L++S+  LR +P E+ +         + +E     AG G    + V+L++L L++N++  
Sbjct: 90  LDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFG----QLVNLEELDLSNNHLTD 145

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +      L  L  LN++ NKL  LPA I  +  L+ LD S N +  +P +I +  +L + 
Sbjct: 146 IPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQL 205

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEGNKLTVLSNN 178
               N+L+ LP     C  L +  A  N I +L  E+L   + +S L++  NK+  + + 
Sbjct: 206 YLRKNKLRSLPE-FSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDE 264

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLS------------RLIRLDLHQN--------- 217
            I     L  L  + N ++ +P T+G+LS            R IR DL Q          
Sbjct: 265 -ITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYL 323

Query: 218 ----------------RILSIPS----SISGCCSLAEFYMGNNALSALPAELGKLSK--- 254
                             +++PS    ++    SL          + +P E+    +   
Sbjct: 324 RSKIQDEPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHP 383

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLD--LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           + T +   NQL E      +L+ SV D  L  N +S +  E+  +  L  L +  N L +
Sbjct: 384 VATANFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTS 443

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   +      AL +     L  N      +    +  + T L   ++  S++       
Sbjct: 444 LPEEM-----EALARLQIINLSFNRFKVFPSVLYRMGALETILLSNNQVGSID------- 491

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           P ++    ++  LDL  N + ++PPEL +C +L+TL+L  N  +    AIL 
Sbjct: 492 PLQLKNMDKLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILA 543



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 6/191 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R+++ + E + + ++  A     WE  ++TKL L+ N +Q L  ++   A+L  L +  N
Sbjct: 14  RINLDTPEEAYQNLSFGA-ADRWWEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDN 72

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P A L  L +L  L + +N LR +P +    +P L+ L L +N +  LP    F 
Sbjct: 73  QLTSLPSA-LGQLENLQKLDVSHNKLRSIPEE-LTQLPHLKSLLLHHNELTHLPAG--FG 128

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L +L+EL L    L + PT    L  L  L+L+ N L+S+P     + SL +LD S N 
Sbjct: 129 QLVNLEELDLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNY 188

Query: 533 ISALPPELVSV 543
           +  +P ++ ++
Sbjct: 189 LETVPSKIATM 199


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 191/554 (34%), Positives = 278/554 (50%), Gaps = 32/554 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILA 53
           ++KAAR SG LNLS R L DVP  V++ N D         + G  D+WWE  DL KLILA
Sbjct: 31  LIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED+  LP L VL++  N++  LP AI EL  L+ L++S N I ++P E+   
Sbjct: 91  SNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT
Sbjct: 151 QNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLT 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L 
Sbjct: 211 ALPTE-IGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLK 268

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L P  L  LS L  L+L  N+LK    E   L  L  LDLSNN L  LP
Sbjct: 269 ELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-------PENEDSEAST- 343
             +G +  L+ L L GNPLR +R  ++N  T  LLKYL+ R+        E+E+S A+  
Sbjct: 329 CTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTATAM 388

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELS 400
           T      + T   VT K L       S IP  ++ A     IT ++ S+N + E+P  + 
Sbjct: 389 TLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIV 448

Query: 401 SCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               S+  + L  NKI       L  L  L+ + + NN L  +PS+  + +  LQ + LS
Sbjct: 449 EMKDSVCDVNLGFNKISSI-SLNLCMLLKLTHIDMRNNVLTSLPSE-MEAMTRLQSVILS 506

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGF 517
           +N     P+      +P L+ + +   Q+    PT ++++ +L  LDL  N L  IP   
Sbjct: 507 FNRFKHFPD--VLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPAL 564

Query: 518 KNLTSLTELDLSDN 531
            N  SL  L L  N
Sbjct: 565 GNCESLRALHLEGN 578



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 158/345 (45%), Gaps = 64/345 (18%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N I+ L  E L+NL  L+VL + +NKL  LP  I  L+ L+ LD+S N +  
Sbjct: 267 LKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGS 326

Query: 106 IPDEIGSATALVKFDCSSNQLK------------ELPSSLGRCLNLSDFKA-----SNNC 148
           +P  +GS   L       N L+            EL   L   + + D K      S   
Sbjct: 327 LPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTAT 386

Query: 149 ITSLPED-------------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             +LP +             L  C K + L  E      + N   +S+  +T +  SKN 
Sbjct: 387 AMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEA-----VFNATGSSF--ITTVNFSKNQ 439

Query: 196 LNGMPETIGSLS-RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P  I  +   +  ++L  N+I SI  ++     L    M NN L++LP+E+  +++
Sbjct: 440 LTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTR 499

Query: 255 LGTLDLHSNQLKEY---------------------CVEACQL----RLSVLDLSNNSLSG 289
           L ++ L  N+ K +                      ++  QL    +LS LDL NN L  
Sbjct: 500 LQSVILSFNRFKHFPDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQ 559

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PP +G   +LR L L GNP R  R++++   T A+L+YLRSR+P
Sbjct: 560 IPPALGNCESLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIP 604



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 155/353 (43%), Gaps = 84/353 (23%)

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T LT+LI + N L  + E I  L  L+ LD+H N+I+S+P +I    +L +  + +N + 
Sbjct: 82  TDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIK 141

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP EL  L  L +L L  NQL+E                      LP  IG ++ L +L
Sbjct: 142 QLPKELQHLQNLKSLLLQHNQLEE----------------------LPDSIGHLSILEEL 179

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            ++ N LR++ SS+  G    L+K+                                  +
Sbjct: 180 DVSNNCLRSISSSV--GQLTGLVKF----------------------------------N 203

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L    L+A+P+EI +   + +LD + N ++ +P  ++   SL+ L L +NK+   P+  L
Sbjct: 204 LSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPE--L 261

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
             L+ L  L + NN ++ +  +  +++  L +L+L YN                      
Sbjct: 262 PFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYN---------------------- 299

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
             +L+  P +I  L  L  LDLS N L S+P    +L +L  L L  N +  +
Sbjct: 300 --KLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGI 350



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 187/436 (42%), Gaps = 75/436 (17%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
            NLS+  L  +P E+   KN  +        E V         L++L L  N +  L E 
Sbjct: 202 FNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPE- 260

Query: 64  LRNLPLLTVL---NVSHNKLSEL-PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
              LP LT L   +V +N++  L P  +  L  L  L++ +N +  +P+EI     L + 
Sbjct: 261 ---LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERL 317

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM-------SKLDVEGNKL 172
           D S+N L  LP +LG   NL   +   N +  +  D+ +            ++ V   K 
Sbjct: 318 DLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKT 377

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI---SGC 229
               N+   + T+ +E + + +          ++  L  L+  + +   IP ++   +G 
Sbjct: 378 QEDENSTATAMTLPSESVVNTH----------AIVTLKTLEYCEKQASLIPEAVFNATGS 427

Query: 230 CSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +       N L+ +PA + ++   +  ++L  N++    +  C L +L+ +D+ NN L
Sbjct: 428 SFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVL 487

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + LP E+  MT L+ ++L+ N  +     L              R+P             
Sbjct: 488 TSLPSEMEAMTRLQSVILSFNRFKHFPDVLY-------------RIP------------- 521

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
             T+ T L ++S ++       S  P+++ +  +++ LDL  N + ++PP L +C SL+ 
Sbjct: 522 --TLETIL-ISSNQIG------SIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCESLRA 572

Query: 408 LILSRNKIKDWPDAIL 423
           L L  N  ++   AIL
Sbjct: 573 LHLEGNPFRNPRAAIL 588



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 47/227 (20%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L +    + ++P  I E   + KL++S N I++LP EL    +L++L+L  N++++ PD+
Sbjct: 110 LDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDS 169

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-------------- 466
           I   LS L  L + NN LR + S     +  L   +LS N + +LP              
Sbjct: 170 I-GHLSILEELDVSNNCLRSI-SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDC 227

Query: 467 -----ENPPFS--SLPHLQELYLRR------------MQLRE-----------APTDILR 496
                EN P S   +  L++LYLR+             +L+E            P  +  
Sbjct: 228 TSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQN 287

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L +L+L  N L+ +PE    L  L  LDLS+N++ +LP  L S+
Sbjct: 288 LSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSL 334



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 26/164 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WE  ++TKL L+ N +Q L  ++S   +L  L +  N+I   P AI   L++L  L + +
Sbjct: 79  WEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAI-KELTNLQKLNISH 137

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N ++Q+P +                            L +L+ L L+  QL E P  I  
Sbjct: 138 NKIKQLPKE-------------------------LQHLQNLKSLLLQHNQLEELPDSIGH 172

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  L  LD+S N L+SI      LT L + +LS N ++ALP E+
Sbjct: 173 LSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEI 216


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 297/560 (53%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 32  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 92  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNL 151

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 152 RNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLK 211

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 212 SLPAE-ISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLRFLP-EFPSCRLLK 269

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+G N +  L P  L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 270 ELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 329

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S + +     +T+
Sbjct: 330 CSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTL 388

Query: 352 --ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L   G   + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 389 PSESRVNVHAIITLKILDYSGKQTTLIPDEVFDAVKGNIITSVNFSKNQLCEIPKRIVEL 448

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 449 KEMVSDVNLSFNKL-SFISLELCMLQKLTFLDLRNNFLNSLPEE-MESLIKLQTINLSFN 506

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +         L   PT       L  + +S N + S+ P+  K +
Sbjct: 507 --------RFKILPEV---------LYHIPT-------LETILISNNQVGSVDPQKMKAM 542

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L  LDL +N++  +PPEL
Sbjct: 543 ENLITLDLQNNDLLQIPPEL 562



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 207/518 (39%), Gaps = 88/518 (16%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   LSE+P  +  +++    + + N      +     T L K   S+N+L+ L   
Sbjct: 42  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDD 101

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L     L+     +N +TSLP  + +   + KL+V  NKL +L                 
Sbjct: 102 LRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQIL----------------- 144

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  PE I +L  L  L L  N +  IP       +L +  + NN L+ +PA    L
Sbjct: 145 -------PEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSL 197

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           S L  L+L SNQLK    E   + RL  LD ++N L  +PPE+  M +L  L L  N LR
Sbjct: 198 SSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLR 257

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L       P+  LLK L       E+       E L  + + L      L L    L +
Sbjct: 258 FLPEF----PSCRLLKELYV----GENQIEILGPEHLKHLNSILV-----LDLRDNKLKS 304

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS-----L 426
           +P EI     + +LDLS N I  LP  L     L+ L L  N ++     I+       L
Sbjct: 305 VPDEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVL 363

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPM---------------LQILDLSYNIASLPENPPF 471
             L     D+ P    PSD      M               L+ILD S    +L  +  F
Sbjct: 364 KYLRSKIKDDGP---SPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLIPDEVF 420

Query: 472 SSLP------------HLQELYLRRMQLREAPTDI--------------LRLQQLRILDL 505
            ++              L E+  R ++L+E  +D+                LQ+L  LDL
Sbjct: 421 DAVKGNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDL 480

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             N L S+PE  ++L  L  ++LS N    LP  L  +
Sbjct: 481 RNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHI 518



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 29/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 297 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 355

Query: 111 --GSATAL------VKFDCSS------NQLKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D  S           LPS    ++   + L     S    T +
Sbjct: 356 NKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLI 415

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 416 PDEVFDAVKGNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKL 475

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 476 TFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVG--S 533

Query: 270 VEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 534 VDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAI 593

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 594 LEYLRDRIP 602



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 182/434 (41%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 203 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NLLEAVPPELANMESLELL 249

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I  + P+ +    +++  D   N+LK +P  
Sbjct: 250 YLRRNKLRFLPE-FPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPDE 308

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 309 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 367

Query: 192 SK---------NLLNGMPETIGSLSR--------LIRLDLHQNRILSIPSSISGCCS--- 231
           SK         + + G   T+ S SR        L  LD    +   IP  +        
Sbjct: 368 SKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLIPDEVFDAVKGNI 427

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 428 ITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 487

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT   +    +++  + D +     E+LI
Sbjct: 488 LPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVG-SVDPQKMKAMENLI 546

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           T                                  LDL  N + ++PPEL +C +L+TL+
Sbjct: 547 T----------------------------------LDLQNNDLLQIPPELGNCVNLRTLL 572

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 573 LDGNPFRVPRAAIL 586



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 17/211 (8%)

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           E ++   ++  + L+  A +    S +L+L G NLS +P  +W       +D+   + Q 
Sbjct: 19  ERKEDFGASVPQGLLKAARK----SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQN 70

Query: 395 LPPELSS----CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
           L    +        L  LI+S NK++   D  L  L +L+ L + +N L  +PS   +++
Sbjct: 71  LSFGATERWWEQTDLTKLIISNNKLQSLTDD-LRLLPALTVLDIHDNQLTSLPS-AIREL 128

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L++S+N +  LPE    ++L +L+ LYL+  +L   P    +L  L  LD+S N 
Sbjct: 129 ENLQKLNVSHNKLQILPEE--ITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNR 186

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P  F +L+SL  L+LS N + +LP E+
Sbjct: 187 LTTVPASFSSLSSLVRLNLSSNQLKSLPAEI 217


>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
           scrofa]
          Length = 602

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 296/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN ++S+P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-ISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLPE-FPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++    E  +T+
Sbjct: 329 CSLGKLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEM 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISLELCMLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKILPEV--LY--------------RIPTLETILISNNQVGSVDPQKMKTM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L  LDL +N++  +PPEL
Sbjct: 542 ENLITLDLQNNDLLQIPPEL 561



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 29/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 354

Query: 111 -GSATALVKF-------------DCSSNQLKELPS----SLGRCLNLSDFKASNNCITSL 152
                 ++K+             DC +     LPS    ++   + L     S+     +
Sbjct: 355 NKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRVNIHAIITLKTLDYSDKQTALI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 415 PDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLSFISLELCMLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGS-- 532

Query: 270 VEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 533 VDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAI 592

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 593 LEYLRDRIP 601



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 195/491 (39%), Gaps = 119/491 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAG---EGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +  +L+ L L++N +  + 
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEG--FEQLFNLEDLDLSNNRLSSIP 190

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  +  LN+S N+L  LPA I  +  LK LD + N +  IP E+ S  +L     
Sbjct: 191 ASFSSLSSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYL 250

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 251 RRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITL 310

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 311 LQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 195 LLNGMPET-----------------IGSLSRLIRLDLHQNRILSIPSSISGCCS---LAE 234
             +G+ ++                 I ++  L  LD    +   IP  +        +  
Sbjct: 370 KDDGLSQSDCVTETAMTLPSESRVNIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITS 429

Query: 235 FYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L  +P  + ++ ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 430 VNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPE 489

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  + L   L   PT   +    +++  + D +   T E+LIT  
Sbjct: 490 EMESLVRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVG-SVDPQKMKTMENLIT-- 546

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                                           LDL  N + ++PPEL +C +L+TL+L  
Sbjct: 547 --------------------------------LDLQNNDLLQIPPELGNCVNLRTLLLDG 574

Query: 413 NKIKDWPDAIL 423
           N  +    AIL
Sbjct: 575 NPFRVPRAAIL 585


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 188/560 (33%), Positives = 299/560 (53%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNASERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L   L +    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAEL-SGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G++  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMTL 387

Query: 352 --ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+      + T L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSYNKLSSISLELCT-LQKLTFLDLRNNFLNSLPEE-MESLTRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + ++ P+  K +
Sbjct: 506 --------RFKILPEV--LY--------------RIPTLETVLISNNQVGALDPQKMKTM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L  LDL +N++  +PPEL
Sbjct: 542 ENLITLDLQNNDLLQIPPEL 561



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IEKL  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIG------------------------SATALVKF-------------DCSSNQLKE 128
           +P  +G                            ++K+             D  +     
Sbjct: 327 LPCSLGRLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   L L     S+     +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   + +L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSYNKLSSISLELCTLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  +    L  LDL NN L  +PPE+G    
Sbjct: 507 FKILPEVLYRIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 183/439 (41%), Gaps = 84/439 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L ++  L +L
Sbjct: 202 LNLSSNQLKSLPAEL--------SGMKRLKHLDCNS-----NLLETIPPELASMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I K+  E +    +++  D   N+LK +P  
Sbjct: 249 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SKNLLNG------MPETIGSLSRLIRLDLHQNRILS-----------IPSSISGCCS--- 231
           SK   +G      + ET  +L    R+++H    L            IP  +        
Sbjct: 367 SKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 427 ITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKLSSISLELCTLQKLTFLDLRNNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +T L+ + L+ N  + L   L   PT      L + L  N      D +   T
Sbjct: 487 LPEEMESLTRLQTINLSFNRFKILPEVLYRIPT------LETVLISNNQVGALDPQKMKT 540

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 541 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 566

Query: 405 LQTLILSRNKIKDWPDAIL 423
           L+TL+L  N  +    AIL
Sbjct: 567 LRTLLLDGNPFRVPRAAIL 585


>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
 gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
          Length = 608

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/559 (32%), Positives = 290/559 (51%), Gaps = 52/559 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEA---------GEGDKWWEAVDLQKLILA 53
           +LK AR SGSLNLSNRSL +VP++V++ N D +          + D+WW+ V+L KL L+
Sbjct: 38  LLKQARKSGSLNLSNRSLAEVPDDVWRINLDASKSQQSSSMDNDQDRWWDQVELSKLDLS 97

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ L  L  L++  N+L  +P ++ EL  L  L +S N+++ +P+     
Sbjct: 98  SNQLKAISDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALSRNALVGLPNATCDL 157

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L ELPS +G  L+L     SNN ++ LP  +   + +  L++  NKL 
Sbjct: 158 INLKSLMLEHNKLTELPSEIGNLLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLE 217

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           VL +  IA    L +L  S N +  +      L++L RLD+  N I  +P   S   +L 
Sbjct: 218 VLPSE-IAFMKGLKDLNISSNKIKELKVDFQLLNKLERLDIRCNHIEEVP-VFSTDNTLK 275

Query: 234 EFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+G+N + + L + L KLS +  +D+  N+++    E   ++ L   DL+NN +SGLP
Sbjct: 276 ELYLGSNRIKNLLGSTLQKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLP 335

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKED 347
             +G MT L+ L+L GNPLRTLR  +V   T A+LK+LRSR    +P+   S  + T+ +
Sbjct: 336 CNMGNMTQLKSLILNGNPLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGN 395

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWE--AG--EITKLDLSRNSIQELP-PELSSC 402
               AT  S  S   + E    S IP ++W   AG  +I  +D  +N +  +P P +   
Sbjct: 396 TRINATHSSTGSNVDASEKT--SEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEPLIEFS 453

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           + ++ L LS NK+   P + + + + L+ L L NN L  +P +                 
Sbjct: 454 SRIEELYLSSNKLSQLPSS-MANFTKLTYLDLGNNQLGNLPIE----------------- 495

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLT 521
                     S+  L+E+ L   +    P+ I  L  L +L  + N ++SI   G K L+
Sbjct: 496 --------MESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDNKIESIDVSGLKQLS 547

Query: 522 SLTELDLSDNNISALPPEL 540
            L+ LDL +N+I  +PPEL
Sbjct: 548 ELSVLDLQNNDIKEVPPEL 566



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 21/304 (6%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           ++ N IE + +++ N+  L   ++++N +S LP  +G +  LKSL ++ N +  +  +I 
Sbjct: 303 MSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGNPLRTLRRDIV 362

Query: 111 -GSATALVKFDCS--SNQLKELPSSL------GRCLNLSDFKASNNCITS-----LPEDL 156
                A++KF  S  +  + +L SS+         +N +     +N   S     +P DL
Sbjct: 363 QRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDASEKTSEIPGDL 422

Query: 157 ----ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
               A   ++  +D   N LT +   LI   + + EL  S N L+ +P ++ + ++L  L
Sbjct: 423 WSVVAGSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSSMANFTKLTYL 482

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL  N++ ++P  +     L E  + NN  +A+P+ +  LS L  L    N+++   V  
Sbjct: 483 DLGNNQLGNLPIEMESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDNKIESIDVSG 542

Query: 273 CQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            +    LSVLDL NN +  +PPE+G +  L+ L L GN  R  R+++++  T A+++YLR
Sbjct: 543 LKQLSELSVLDLQNNDIKEVPPELGTLKALKSLQLGGNLFRIPRAAILSKGTFAVMEYLR 602

Query: 331 SRLP 334
            R+P
Sbjct: 603 GRIP 606



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 197/463 (42%), Gaps = 92/463 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++SN  L ++P+ + K                L+ L +++N +E L  ++  +  L  L
Sbjct: 186 LDISNNQLSELPHSIQK-------------LACLKFLNMSNNKLEVLPSEIAFMKGLKDL 232

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------------DEIGSA- 113
           N+S NK+ EL      L+ L+ LD+  N I ++P                   + +GS  
Sbjct: 233 NISSNKIKELKVDFQLLNKLERLDIRCNHIEEVPVFSTDNTLKELYLGSNRIKNLLGSTL 292

Query: 114 ---TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              + +   D S N+++ +P  +     L  F  +NN I+ LP ++ + +++  L + GN
Sbjct: 293 QKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGN 352

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS--------- 221
            L  L  +++   T+         +   +P+   S+    + +   N   S         
Sbjct: 353 PLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDAS 412

Query: 222 -----IP----SSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVE 271
                IP    S ++G   +       N L+ +P  L + S ++  L L SN+L +    
Sbjct: 413 EKTSEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSS 472

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                +L+ LDL NN L  LP E+  MT LR+++L+ N    +         P+++  L 
Sbjct: 473 MANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNRFAAI---------PSVIYTLS 523

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                   +   L+  +K   +E +++S +     +  E++ LDL  N
Sbjct: 524 S-------------------LEVLLATDNK---IESIDVSGLK----QLSELSVLDLQNN 557

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            I+E+PPEL +  +L++L L  N  +  P A + S  + + ++
Sbjct: 558 DIKEVPPELGTLKALKSLQLGGNLFR-IPRAAILSKGTFAVME 599



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 26/165 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W+  E++KLDLS N ++ +  ++    +L  L +  N++++ P+++   L  LS L L  
Sbjct: 86  WDQVELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIPESV-RELQQLSKLALSR 144

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P+                             L +L+ L L   +L E P++I  
Sbjct: 145 NALVGLPN-------------------------ATCDLINLKSLMLEHNKLTELPSEIGN 179

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L  L ILD+S N L  +P   + L  L  L++S+N +  LP E+ 
Sbjct: 180 LLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIA 224


>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
 gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
 gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
          Length = 602

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 188/560 (33%), Positives = 295/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 AT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +      R  +T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISLELCVLQKLTFLDLRNNFLNSLPEE-VESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEVESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T  +L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAGILEYLRDRIP 601



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 199/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E   +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NGMPE---------TIGSLSRL-IR-------LDLHQNRILSIPSSISGCCS---LAEFY 236
           +G  +         T+ S SR+ IR       LD    +   IP  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEV 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 26/162 (16%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +T LD+  N +  LP  +    +LQ L +S NK+K  P+ I T+L +L CL L +N L  
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEI-TNLRNLKCLYLQHNELTC 165

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           + S+GF+    L+ LDLS N                        +L   P     L  L 
Sbjct: 166 I-SEGFEQFSNLEDLDLSNN------------------------RLTTVPASFSSLSSLV 200

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+LS N L+S+P     +  L  LD + N +  +PPEL  +
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
           latipes]
          Length = 595

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 188/547 (34%), Positives = 284/547 (51%), Gaps = 27/547 (4%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEA------GEGDKWWEAVDLQKLILAHNNI 57
           +LKAAR SG LNLS R+L  VP  VY+  +EA      G  D+WWE  DL KL+L+ N I
Sbjct: 30  LLKAARKSGQLNLSGRALTKVPQSVYRVNEEAQQNVSFGASDRWWEQTDLTKLLLSSNQI 89

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
            ++ ED+R LP L  L++  N+L+ L +AIGEL  L++L +S N +  +P E+     L 
Sbjct: 90  SQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLR 149

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                 N L+ LP   G+  NL++   S N +T LP+ L   + + K+ +  NKL+ L +
Sbjct: 150 SLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPD 209

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            L +  T +  L  S N L+ +P ++  +  L +L L  NR+  +P   +   +L E Y+
Sbjct: 210 CL-SQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAP--ALKELYV 266

Query: 238 GNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           GNN +  L AE L  L  +  L+L  N+++    +   L  L+ LDL+NN +  LP  + 
Sbjct: 267 GNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLS 326

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATR 354
            +  L+ LL+ GNPLR +R  L+   T  LLKYLR R+ E  E SE   T     + A R
Sbjct: 327 LLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQA-R 385

Query: 355 LSVTSKE----LSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPE-LSSCASLQ 406
           ++V S +    L    M + +IP E + A E   +   + S+N +  +P   L   +SL 
Sbjct: 386 INVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLT 445

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
            L L  N++ D     +  L  L+ L L NN L+ +P+D  +++  L+ + LSYN   S 
Sbjct: 446 ELNLGFNQL-DHCGVEVCRLLQLTHLDLRNNQLKDLPAD-MENLAKLRCIILSYNRFKSF 503

Query: 466 PENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           PE      +  ++ + +   Q+    P  + RL+ L  LDLS N L SIP      TSL 
Sbjct: 504 PE--VLYQMFSMETVLMANNQVSSVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLR 561

Query: 525 ELDLSDN 531
            L L  N
Sbjct: 562 SLSLQGN 568



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 27  EVYKNFDEAG--EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           E+Y   ++ G  E ++      +  L L  N I  + E +  L  LT L++++N +  LP
Sbjct: 263 ELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLP 322

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKFDCSSNQLKELPSS---------- 132
           A++  L  LK L V  N +  I  ++       L+K+     ++KE P S          
Sbjct: 323 ASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKY--LRGRVKEEPESSEDPPTAMTF 380

Query: 133 -------LGRCLNLSDFKASNNCITSLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIAS 182
                  +     L     S+  + S+P++    A+   +   +   NKLT +   L+  
Sbjct: 381 PSQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQL 440

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + LTEL    N L+     +  L +L  LDL  N++  +P+ +     L    +  N  
Sbjct: 441 SSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRF 500

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
            + P  L ++  + T+ + +NQ+    V+  +L     LS LDLSNN L  +PPE+G  T
Sbjct: 501 KSFPEVLYQMFSMETVLMANNQVS--SVDPARLARLEHLSTLDLSNNDLLSIPPELGLCT 558

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR L L GNP RT R+++V   T A+L+YLRSR+P
Sbjct: 559 SLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRIP 594



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 182/423 (43%), Gaps = 82/423 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQK+ L+HN +  L + L  L  + +L+ S+N+LS++PA++  +  L+ L +  N + ++
Sbjct: 194 LQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRL 253

Query: 107 P----------------------DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
           P                      +++    A+   +   N+++ +P  +     L+    
Sbjct: 254 PQLHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDL 313

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS-KNLLNGMPET- 202
           +NN I SLP  L+    +  L VEGN L  +  +L+   T   EL+   +  +   PE+ 
Sbjct: 314 TNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGT--NELLKYLRGRVKEEPESS 371

Query: 203 ----------------IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN---NALS 243
                           + S+  L  LD    ++ SIP               N   N L+
Sbjct: 372 EDPPTAMTFPSQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLT 431

Query: 244 ALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++PA L +LS  L  L+L  NQL    VE C+L +L+ LDL NN L  LP ++  +  LR
Sbjct: 432 SIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLR 491

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            ++L+ N  ++          P +L                     + +M T L   ++ 
Sbjct: 492 CIILSYNRFKSF---------PEVLY-------------------QMFSMETVLMANNQV 523

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
            S++       P+ +     ++ LDLS N +  +PPEL  C SL++L L  N  +    A
Sbjct: 524 SSVD-------PARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAA 576

Query: 422 ILT 424
           I+ 
Sbjct: 577 IVA 579



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 139/312 (44%), Gaps = 68/312 (21%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + +N +S +  ++  L  L TLDLH NQL        +L+ L  L LS+N LS L
Sbjct: 79  LTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL 138

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P E+                              +L+ LRS                   
Sbjct: 139 PVEV-----------------------------CMLRNLRS------------------- 150

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
                      L+L+   L  +P E  +   +T+LDLS+N + +LP  L     LQ + L
Sbjct: 151 -----------LTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISL 199

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           S NK+   PD  L+ L+++  L   NN L  VP+     +  L+ L L +N +  LP+  
Sbjct: 200 SHNKLSCLPDC-LSQLTNVKLLDCSNNQLSDVPA-SLAHMLSLEQLHLRHNRLQRLPQ-- 255

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                P L+ELY+   Q+     + L  L+ + +L+L  N ++++PE    L +LT LDL
Sbjct: 256 --LHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDL 313

Query: 529 SDNNISALPPEL 540
           ++N+I +LP  L
Sbjct: 314 TNNDIGSLPASL 325



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 24/205 (11%)

Query: 359 SKELSLEGMNLSAIPSEI-------------------WEAGEITKLDLSRNSIQELPPEL 399
           S +L+L G  L+ +P  +                   WE  ++TKL LS N I ++  ++
Sbjct: 37  SGQLNLSGRALTKVPQSVYRVNEEAQQNVSFGASDRWWEQTDLTKLLLSSNQISQISEDI 96

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               +L TL L  N++     AI   L  L  L+L +N L  +P +    +  L+ L L 
Sbjct: 97  RLLPALVTLDLHDNQLNTLHSAI-GELQELQTLRLSHNQLSSLPVEVCM-LRNLRSLTLQ 154

Query: 460 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N+  +LPE   F  L +L EL L + +L + P  + RL  L+ + LS N L  +P+   
Sbjct: 155 QNLLENLPEE--FGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLS 212

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
            LT++  LD S+N +S +P  L  +
Sbjct: 213 QLTNVKLLDCSNNQLSDVPASLAHM 237


>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
          Length = 602

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 300/560 (53%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNASERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLMRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L   L +    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAEL-SGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLPE-FPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G++  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGRLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTL 387

Query: 352 --ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L +L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKLS-FISLELCTLQKLTFLDLRNNFLSSLPEE-MESLTGLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKILPEV--LY--------------RIPTLETILISNNQVGSLDPQKMKTM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L  LDL +N++  +PPEL
Sbjct: 542 ENLITLDLQNNDLLQIPPEL 561



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIRREII 354

Query: 111 --GSATAL------VKFDCSSNQ------LKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D  S           LPS    ++   + L     S+     +
Sbjct: 355 NKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQTALI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   + +L +L
Sbjct: 415 PDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCTLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSLD 534

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  +    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 535 PQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 594

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 595 YLRDRIP 601



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 182/439 (41%), Gaps = 84/439 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L ++  L +L
Sbjct: 202 LNLSSNQLKSLPAEL--------SGMKRLKHLDCNS-----NLLETIPPELASMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +    +++  D   N+LK +P  
Sbjct: 249 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SKNLLNG------MPETIGSLSRLIRLDLHQNRILS-----------IPSSISGCCS--- 231
           SK   +G      + ET  +L    R+++H    L            IP  +        
Sbjct: 367 SKIKDDGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQTALIPDEVFDAVKSNI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN LS 
Sbjct: 427 ITSINFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCTLQKLTFLDLRNNFLSS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +T L+ + L+ N  + L   L   PT      L + L  N      D +   T
Sbjct: 487 LPEEMESLTGLQTINLSFNRFKILPEVLYRIPT------LETILISNNQVGSLDPQKMKT 540

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 541 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 566

Query: 405 LQTLILSRNKIKDWPDAIL 423
           L+TL+L  N  +    AIL
Sbjct: 567 LRTLLLDGNPFRVPRAAIL 585


>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
           leucogenys]
          Length = 602

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 188/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISVELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 199/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    VE C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Loxodonta africana]
          Length = 602

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 302/560 (53%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ + +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  +L D   S+N +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVPVSFSALSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  +  +  L  L L +N++ S+P     C  L 
Sbjct: 211 SLPAE-ISRMKKLKHLDCNSNLLETIPSELAGMESLELLYLRRNKLHSLP-QFPSCRLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  L+L  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  +++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTL 387

Query: 352 --ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       ++IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHIVTSVNFSKNELCEIPKRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ+++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFVSLELCMLQKLTFLDLRNNFLNSLPEE-MESLIRLQMINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKILPEV--LY--------------RIPTLETVLISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREII 354

Query: 111 --GSATAL------------VKFDCSSNQLKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L             + D  +     LPS    ++     L     S+   TS+
Sbjct: 355 NKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 415 PDEVFDAVKSHIVTSVNFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFVSLELCMLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLNSLPEEMESLIRLQMINLSFNRFKILPEVLYRIPTLETVLISNNQVGSVD 534

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  ++   L+ LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 535 PQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 594

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 595 YLRDRIP 601



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 186/434 (42%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+ +                L+ L    N +E +  +L  +  L +L
Sbjct: 202 LNLSSNQLKSLPAEISR-------------MKKLKHLDCNSNLLETIPSELAGMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +    +++  +   N+LK +P  
Sbjct: 249 YLRRNKLHSLPQ-FPSCRLLKELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ITLLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SK------NLLNGMPET-----------IGSLSRLIRLDLHQNRILSIPSSISGCCS--- 231
           SK         + + ET           + +++ L  LD    +  SIP  +        
Sbjct: 367 SKIRDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 427 VTSVNFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFVSLELCMLQKLTFLDLRNNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L         P +L     R+P               
Sbjct: 487 LPEEMESLIRLQMINLSFNRFKIL---------PEVL----YRIP--------------- 518

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           T+ T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+
Sbjct: 519 TLETVL-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 572 LDGNPFRVPRAAIL 585


>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
           carolinensis]
          Length = 605

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 182/553 (32%), Positives = 288/553 (52%), Gaps = 31/553 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +++AAR SG LNLS R L +VP  V++ N D   EA      G  D+WWE  DL KLIL+
Sbjct: 32  LIRAARKSGHLNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILS 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DL+ LP LTVL++  N+L+ LP AIG L  L+ L+VS N +  +P+E+   
Sbjct: 92  SNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQL 151

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  LP   G+ ++L +   SNN ++++P   A  + + +L++  N+L 
Sbjct: 152 KHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLK 211

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I++   L +L  +KN L  +P  + +++ L +L L +N++  +P  +  C  L 
Sbjct: 212 FLPAE-ISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRYLP-DLPSCTVLK 269

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ L  LDL  N+LK    E   L  +  LDLSNN +S LP
Sbjct: 270 ELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISSLP 329

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-ENEDSEASTTKEDLIT 350
            ++G ++ L+ L L GNPLRT+R  ++   T  +LKYLR+++  +NE           +T
Sbjct: 330 CKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTAMT 389

Query: 351 MATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSS 401
           + ++L V        K L       + IP E+  A     +T ++ S+N + E+P  +  
Sbjct: 390 LPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIPARIVE 449

Query: 402 CA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              ++  +  S NK+       L  L  L+ L + NN L  +P D  + +  LQI++L++
Sbjct: 450 LKETVCDINFSFNKLFSV-SLELCMLYRLTHLDVRNNCLTSLP-DEMEALGKLQIINLAF 507

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFK 518
           N     P+      +P L+ + L   Q+    P  I +L QL  LDL  N +  +P    
Sbjct: 508 NRFKVFPD--ILYRIPTLEAILLGNNQVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELG 565

Query: 519 NLTSLTELDLSDN 531
           N TSL  L L  N
Sbjct: 566 NCTSLRTLLLEGN 578



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 215/515 (41%), Gaps = 80/515 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S  +LSE+P  +  +++    +   N      D     T L K   SSN+LK L   
Sbjct: 42  LNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILSSNKLKCLSDD 101

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L     L+     +N +TSLP  +     + KL+V  NKLT L   L+     L  L+  
Sbjct: 102 LKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELL-QLKHLRSLLLQ 160

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +P+  G L  L  LD+  N + +IP+S +   +L +  + +N L  LPAE+  +
Sbjct: 161 HNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLKFLPAEISAM 220

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
             L  LD             C         + N L  +PPE+  M +L +L L  N LR 
Sbjct: 221 KSLRQLD-------------C---------TKNYLETIPPELANMASLEQLYLRRNKLRY 258

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L     + P+  +LK L        +++    K + +     L V    L L    L ++
Sbjct: 259 LP----DLPSCTVLKELHV-----GENQIEMLKAEHLKHLNSLCV----LDLRENKLKSV 305

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS-----LS 427
           P EI     I +LDLS N I  LP +L + + L+ L L  N ++     IL       L 
Sbjct: 306 PDEIALLEGIERLDLSNNDISSLPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILK 365

Query: 428 SLSCLKLDNNPLR----------QVPSD---GFKDIPMLQILDLSYNIAS-LPE------ 467
            L     D+N +R           +PS        +  L+ LD S   A+ +P+      
Sbjct: 366 YLRNKIQDDNEIRPNGVLPVTAMTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAV 425

Query: 468 -NPPFSSLP----HLQELYLRRMQLREAPTDI--------------LRLQQLRILDLSQN 508
            N P +++     HL E+  R ++L+E   DI                L +L  LD+  N
Sbjct: 426 GNNPVTTVNFSKNHLTEIPARIVELKETVCDINFSFNKLFSVSLELCMLYRLTHLDVRNN 485

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L S+P+  + L  L  ++L+ N     P  L  +
Sbjct: 486 CLTSLPDEMEALGKLQIINLAFNRFKVFPDILYRI 520



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 49/337 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE LK E L++L  L VL++  NKL  +P  I  L  ++ LD+S N I  
Sbjct: 268 LKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISS 327

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI---------------- 149
           +P ++G+ + L       N L+ +   + +       K   N I                
Sbjct: 328 LPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTA 387

Query: 150 ----TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETI 203
               + L  +L   + +  LD    + TV+ + ++ +     +T +  SKN L  +P  I
Sbjct: 388 MTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIPARI 447

Query: 204 GSLSRLI-RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
             L   +  ++   N++ S+   +     L    + NN L++LP E+  L KL  ++L  
Sbjct: 448 VELKETVCDINFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDEMEALGKLQIINLAF 507

Query: 263 NQLKEY--------CVEACQL-----------------RLSVLDLSNNSLSGLPPEIGKM 297
           N+ K +         +EA  L                 +LS LDL NN +  +PPE+G  
Sbjct: 508 NRFKVFPDILYRIPTLEAILLGNNQVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNC 567

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           T+LR LLL GNP RT R +++   T A+L+YLRSR+P
Sbjct: 568 TSLRTLLLEGNPFRTPRVTILAKGTDAVLEYLRSRIP 604



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 199/483 (41%), Gaps = 115/483 (23%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIEKLKED 63
           LN+S+  L D+P E+ +           +E     D++ + + L++L +++N++  +   
Sbjct: 134 LNVSHNKLTDLPEELLQLKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTS 193

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF---- 119
              L  L  LN+SHN+L  LPA I  +  L+ LD + N +  IP E+ +  +L +     
Sbjct: 194 FAFLTNLVQLNLSHNQLKFLPAEISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRR 253

Query: 120 ------------------------------------------DCSSNQLKELPSSLGRCL 137
                                                     D   N+LK +P  +    
Sbjct: 254 NKLRYLPDLPSCTVLKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLE 313

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-----MLTELIAS 192
            +     SNN I+SLP  L + S++  L +EGN L  +  +++   T      L   I  
Sbjct: 314 GIERLDLSNNDISSLPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQD 373

Query: 193 KNLL--NG-MPET-----------IGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAEF 235
            N +  NG +P T           + +L+ L  LD  + +   IP  +    G   +   
Sbjct: 374 DNEIRPNGVLPVTAMTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTV 433

Query: 236 YMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
               N L+ +PA + +L + +  ++   N+L    +E C L RL+ LD+ NN L+ LP E
Sbjct: 434 NFSKNHLTEIPARIVELKETVCDINFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDE 493

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +  L+ + L  N  +           P +L     R+P               T+  
Sbjct: 494 MEALGKLQIINLAFNRFKVF---------PDIL----YRIP---------------TLEA 525

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
            L   ++  SL+       P +I +  +++ LDL  N I  +PPEL +C SL+TL+L  N
Sbjct: 526 ILLGNNQVGSLD-------PLQIKKLDQLSTLDLQNNDILHVPPELGNCTSLRTLLLEGN 578

Query: 414 KIK 416
             +
Sbjct: 579 PFR 581



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 5/191 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R +  S  L+L G  LS +P  +W     T  +  +N              L  LILS N
Sbjct: 34  RAARKSGHLNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILSSN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           K+K   D  L  L +L+ L + +N L  +P      +  LQ L++S+N +  LPE     
Sbjct: 94  KLKCLSDD-LKLLPALTVLDIHDNQLTSLPL-AIGSLENLQKLNVSHNKLTDLPEE--LL 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L HL+ L L+  +L   P +  +L  L  LD+S N + +IP  F  LT+L +L+LS N 
Sbjct: 150 QLKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQ 209

Query: 533 ISALPPELVSV 543
           +  LP E+ ++
Sbjct: 210 LKFLPAEISAM 220


>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
 gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
 gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
 gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
 gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
 gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
          Length = 602

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   LR L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVDLSFNKL-SFISLELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 200/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLR 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 188/541 (34%), Positives = 282/541 (52%), Gaps = 34/541 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+LS+  L+ +P E+   KN  E        +A+        +L++L L+ N +E L ED
Sbjct: 50  LDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPED 109

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L++ +N+L  LP  IG+L  L+ L +S N +  +P++IG+   L   D S 
Sbjct: 110 IGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSR 169

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQLK LP  +G+  NL +   S+N + +LPED+ +   +  LD+  NKL  L    I   
Sbjct: 170 NQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKE-IGKL 228

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L  S N L  +PE IG L  L  LDL  N++ ++P  I    +L E ++ NN L 
Sbjct: 229 RNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLK 288

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ALP E+GKL  L TL+L +N+L+    E   L+ L  L+L  N L  LP EIGK+  L +
Sbjct: 289 ALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPE 348

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSK 360
           L L+ N L  L         P  +  L++  +L  + +   +  KE  I     L    +
Sbjct: 349 LDLSHNKLEAL---------PKEIGQLQNLPKLDLSHNQLQALPKE--IGQLQNL----R 393

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL L    L  +P EI +   +  LDLS N ++ LP E+    +LQ L L  N+++  P 
Sbjct: 394 ELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPK 453

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            I   L +L  L L  N L  +P +  K +  LQ L+L YN + +LP+      L +LQ+
Sbjct: 454 EI-GKLQNLQELNLRYNKLEALPKEIGK-LKNLQKLNLQYNQLKTLPKE--IGKLKNLQK 509

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L+  QL+  P DI +L+ LR LDL  N L+++P+    L +L EL+L  N +  LP E
Sbjct: 510 LNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKE 569

Query: 540 L 540
           +
Sbjct: 570 I 570



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 180/542 (33%), Positives = 272/542 (50%), Gaps = 59/542 (10%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+LS   L+ +P E+ K  N  E    D   EA+        +LQ L L+ N +E L ++
Sbjct: 165 LDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKE 224

Query: 64  ---LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              LRNLP    L++SHN+L  LP  IG+L  L+ LD+ +N +  +P+EIG    L +  
Sbjct: 225 IGKLRNLP---KLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELH 281

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+LK LP  +G+  NL     S N + +LPE++ +   +  L+++ N L  L    I
Sbjct: 282 LYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEE-I 340

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL  S N L  +P+ IG L  L +LDL  N++ ++P  I    +L E ++ NN
Sbjct: 341 GKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNN 400

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP E+GKL  L  LDL  N+L+    E  QL+ L +LDL  N L  LP EIGK+  
Sbjct: 401 QLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQN 460

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L  N L  L   +        LK L+                             
Sbjct: 461 LQELNLRYNKLEALPKEI------GKLKNLQK---------------------------- 486

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
             L+L+   L  +P EI +   + KL+L  N ++ LP ++    +L+ L L  N++K  P
Sbjct: 487 --LNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLP 544

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L +L  L L  N L  +P +  K +  L+IL LS+N + +LP+      L +L+
Sbjct: 545 KEI-GKLQNLQELNLRYNKLETLPKEIGK-LRNLKILYLSHNQLQALPKE--IEKLVNLR 600

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +LYL   QL+  P +I +LQ L+ LDL  N L+++P+    L SL  L L +  + +LP 
Sbjct: 601 KLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPI 660

Query: 539 EL 540
           E+
Sbjct: 661 EI 662



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 249/496 (50%), Gaps = 47/496 (9%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS--------- 122
           VL++S NKL  LP  IG+L  L+ LD+S N +  +P++IG    L +   S         
Sbjct: 49  VLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPE 108

Query: 123 --------------SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
                         +NQLK LP  +G+  NL +   S+N + +LPED+ +   +  LD+ 
Sbjct: 109 DIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLS 168

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  L    I     L EL  S N L  +PE IG+L  L  LDL +N++ ++P  I  
Sbjct: 169 RNQLKTLPEE-IGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGK 227

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L +  + +N L  LP E+G+L  L  LDL  NQL+    E  QL+ L  L L NN L
Sbjct: 228 LRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKL 287

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP EIGK+  LR L L+ N L  L   + N      LK LR+          +     
Sbjct: 288 KALPKEIGKLKNLRTLNLSTNKLEALPEEIGN------LKNLRT---------LNLQYNP 332

Query: 348 LITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L T+   +       EL L    L A+P EI +   + KLDLS N +Q LP E+    +L
Sbjct: 333 LKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNL 392

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L L  N+++  P+ I   L +L  L L +N L  +P +    +  LQILDL YN + +
Sbjct: 393 RELHLYNNQLETLPEEI-GKLQNLQILDLSHNKLEALPKE-IGQLQNLQILDLRYNQLEA 450

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LP+      L +LQEL LR  +L   P +I +L+ L+ L+L  N L+++P+    L +L 
Sbjct: 451 LPKE--IGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQ 508

Query: 525 ELDLSDNNISALPPEL 540
           +L+L  N +  LP ++
Sbjct: 509 KLNLQYNQLKTLPKDI 524



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 12/299 (4%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS+  L+ +P E+   +N  E    +   E +        +LQ L L+HN +E L +
Sbjct: 371 KLDLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPK 430

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L +L++ +N+L  LP  IG+L  L+ L++ +N +  +P EIG    L K +  
Sbjct: 431 EIGQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQ 490

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQLK LP  +G+  NL       N + +LP+D+     + +LD+  N+L  L    I  
Sbjct: 491 YNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKE-IGK 549

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL    N L  +P+ IG L  L  L L  N++ ++P  I    +L + Y+  N L
Sbjct: 550 LQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQL 609

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
            ALP E+GKL  L  LDL +N LK    +  +L+ L  L L N  L  LP EIGK+  L
Sbjct: 610 QALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLGEL 668


>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
          Length = 602

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 188/560 (33%), Positives = 293/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISLELCMLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 198/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L   +L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
          Length = 581

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 10  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 69

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 70  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 129

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 130 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 189

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 190 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 247

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   LR L  LDLSNN +S LP
Sbjct: 248 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLP 307

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 308 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 366

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 367 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVEL 426

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 427 KEMVSDVDLSFNKLS-FISLELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 484

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 485 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 520

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 521 ENLTTLDLQNNDLLQIPPEL 540



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 246 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISS 305

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 306 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 365

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 366 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVE 425

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 426 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 485

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 486 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 545

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 546 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 580



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 200/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 112 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 171

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 172 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 231

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 232 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLR 291

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 292 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 350

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 351 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSIN 410

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 411 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 470

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 471 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 502

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 503 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 555

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 556 FRVPRAAIL 564



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 17  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 76

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 77  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 134

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 135 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 192

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 193 AEINRMKRLKHLDCNSNLLETIPPELAGM 221


>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
           troglodytes]
 gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
          Length = 602

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVDLSFNKL-SFISLELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 200/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
          Length = 602

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVDLSFNKL-SFISLELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLGGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 200/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLGGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
 gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
          Length = 602

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 292/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+A+ EL  L+ L+VS N +   P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISLELCMLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 197/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+  P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 26/162 (16%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +T LD+  N +  LP  +    +LQ L +S NK+K +P+ I T+L +L CL L +N L  
Sbjct: 107 LTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEI-TNLRNLKCLYLQHNELTC 165

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           + S+GF+ +  L+ LDLS N                        +L   P     L  L 
Sbjct: 166 I-SEGFEQLSNLEDLDLSNN------------------------RLTTVPASFSSLSSLV 200

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+LS N L+S+P     +  L  LD + N +  +PPEL  +
Sbjct: 201 RLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
          Length = 602

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 292/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+A+ EL  L+ L+VS N +   P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KEMVSDVNLSFNKL-SFISLELCMLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 197/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+  P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 26/162 (16%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +T LD+  N +  LP  +    +LQ L +S NK+K +P+ I T+L +L CL L +N L  
Sbjct: 107 LTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEI-TNLRNLKCLYLQHNELTC 165

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           + S+GF+ +  L+ LDLS N                        +L   P     L  L 
Sbjct: 166 I-SEGFEQLSNLEDLDLSNN------------------------RLTTVPASFSSLSSLV 200

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+LS N L+S+P     +  L  LD + N +  +PPEL  +
Sbjct: 201 RLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|291398713|ref|XP_002715973.1| PREDICTED: leucine rich repeat containing 40 [Oryctolagus
           cuniculus]
          Length = 602

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 291/560 (51%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   E          ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDVPEEANQNLSFSTSERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  +L D   SNN +T++    +  S + ++++  N L 
Sbjct: 151 RNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTISAGFSSLSGLVRINLSSNHLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-ISRMKKLRHLDCSSNLLESIPPELAGMESLELLYLRRNKLRFLPE-FPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L A+ L  LS +  L+L  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDEISLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTL 387

Query: 352 AT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +         VT K L       + IP E+++A +   I  ++ S+N + E+P  ++  
Sbjct: 388 PSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNIIISVNFSKNQLSEIPKRITEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + T + LS NK+       L  L  L+ L L +N L  +P +  K +  LQ+++LS+N
Sbjct: 448 KEMVTEVNLSFNKL-SCISLELCMLQKLTFLDLRSNFLNSLPEE-MKSLIRLQVINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +         L   PT       L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKILPEV---------LYHIPT-------LETILISNNQVGSVDPQKMKTM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  D L++L  + VL +  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDEISLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D  +     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   +  ++   N+L+ +   +  
Sbjct: 387 LPSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNIIISVNFSKNQLSEIPKRITE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+TE+  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVTEVNLSFNKLSCISLELCMLQKLTFLDLRSNFLNSLPEEMKSLIRLQVINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
              LP  L  +  L T+ + +NQ+    V+  +++    L+ LDL NN L  +PPE+G  
Sbjct: 507 FKILPEVLYHIPTLETILISNNQVG--SVDPQKMKTMENLTTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS+  L+ +P E+ +                L+ L  + N +E +  +L  +  L +L
Sbjct: 202 INLSSNHLKSLPAEISR-------------MKKLRHLDCSSNLLESIPPELAGMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   D +   ++++  +   N+LK +P  
Sbjct: 249 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ISLLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SKNLLNG------MPET-----------IGSLSRLIRLDLHQNRILSIPSSISGCCS--- 231
           SK   +G      + ET           + ++  L  LD    +   IP  +        
Sbjct: 367 SKIKDDGPSQSDSVTETAMTLPSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N LS +P  + +L ++ T ++L  N+L    +E C L +L+ LDL +N L+ 
Sbjct: 427 IISVNFSKNQLSEIPKRITELKEMVTEVNLSFNKLSCISLELCMLQKLTFLDLRSNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 487 LPEEMKSLIRLQVINLSFNRFKILPEVLYHIPT--------------------------- 519

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+
Sbjct: 520 -LETIL-ISNNQVG------SVDPQKMKTMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 572 LDGNPFRVPRAAIL 585


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 182/560 (32%), Positives = 285/560 (50%), Gaps = 51/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   EA      G  D+WWE  DL KL+L+
Sbjct: 29  LLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLS 88

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ LP L VL++  N+LS LP +IG+L  L+ L +S N + ++P  +   
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRL 148

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L       N ++++P  LG+ +NL D   SNN +  +PE LA+   + KLD+  NKL 
Sbjct: 149 TNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S+N +  +P  +  +  L +L L  N++  +P  +  C +L 
Sbjct: 209 SLP-PAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  LDL+NN +S LP
Sbjct: 267 ELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE------NEDSEASTTK 345
             +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E       E+ + + T 
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTF 386

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
           +    +      T K L       ++IP ++ +A +   +  ++ S+N +  +P      
Sbjct: 387 QSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKNQLTAVP------ 440

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
                     ++I D  D       +L+ + L  N L  +P+D F  +  L  +DL  N 
Sbjct: 441 ----------HRIVDLKD-------TLADINLGFNKLTTIPAD-FCHLKQLMHIDLRNNL 482

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-GFKNL 520
           + SLP       L  L+ + L   + +  P  + R+  L  + +S N +  I     K L
Sbjct: 483 LISLPME--LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTL 540

Query: 521 TSLTELDLSDNNISALPPEL 540
           + L+ LDLS+N+I  +PPEL
Sbjct: 541 SRLSTLDLSNNDIMQVPPEL 560



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ L E++  L  L  L++++N +S LP  +G L  LKSL +  N +  I  ++ 
Sbjct: 294 LRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLL 353

Query: 111 -GSATALVKFDCSSNQ------LKELPSS-----------LGRCLNLSDFKASNNCITSL 152
                 L+K+  S  Q      LKE P +           +     L     S     S+
Sbjct: 354 TKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASI 413

Query: 153 PEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+D+    D + ++ ++   N+LT + + ++     L ++    N L  +P     L +L
Sbjct: 414 PDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQL 473

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + +DL  N ++S+P  + G   L    +  N   + P  L ++  L T+ + SNQ+    
Sbjct: 474 MHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVG--G 531

Query: 270 VEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           ++A Q+    RLS LDLSNN +  +PPE+G  T+LR L+L GNP R  R++++   T A+
Sbjct: 532 IDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAV 591

Query: 326 LKYLRSRLP 334
           L+YLRSR+P
Sbjct: 592 LEYLRSRIP 600



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 212/516 (41%), Gaps = 83/516 (16%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   L+E+PA++  L++    +   N      D     T L K   SSN+L+ +P  
Sbjct: 39  LNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDD 98

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +     L      +N ++SLP+ + D  ++ KL +  NKLT L                 
Sbjct: 99  VKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTEL----------------- 141

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  +  L+ L  L L QN I  IP  +    +L +  + NN L  +P  L  L
Sbjct: 142 -------PSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANL 194

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL  N+LK       Q++ L +LD S N +  +PP + +M +L +L L  N LR
Sbjct: 195 QNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLR 254

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L       P    LK L     + E  EA   K         LS+    L L    + +
Sbjct: 255 YLPEL----PCCKTLKELHCGNNQIEVLEAEHLKH-----LNALSL----LELRDNKVKS 301

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI     + +LDL+ N I  LP  L +   L++L L  N ++     +LT  +    
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTG-EL 360

Query: 432 LKLDNNPLRQVPSDGFKDIP------------------MLQILDLS-YNIASLPE----- 467
           LK   + +++ P+ G K+ P                   L+ LD S    AS+P+     
Sbjct: 361 LKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDA 420

Query: 468 ---NP---------PFSSLPH--------LQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
              NP           +++PH        L ++ L   +L   P D   L+QL  +DL  
Sbjct: 421 VDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRN 480

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N L S+P   + L  L  + LS N   + P  L  +
Sbjct: 481 NLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRI 516



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 180/450 (40%), Gaps = 104/450 (23%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L  L L++N++  + E L NL  L  L++S NKL  LP AI ++  L+ LD S N 
Sbjct: 170 QLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQ 229

Query: 103 IMKIPD----------------------EIGSATALVKFDCSSNQL-------------- 126
           +  IP                       E+     L +  C +NQ+              
Sbjct: 230 MESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNAL 289

Query: 127 ----------KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                     K LP  +     L     +NN I+SLP  L    K+  L +EGN L  + 
Sbjct: 290 SLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIR 349

Query: 177 NNLIASWT-MLTELIASK------NLLNGMPET-----------IGSLSRLIRLDLHQNR 218
            +L+   T  L + + S+        L   P+T           I ++  L  LD  + +
Sbjct: 350 RDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQ 409

Query: 219 ILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQ 274
             SIP  +        +A      N L+A+P  +  L   L  ++L  N+L     + C 
Sbjct: 410 DASIPDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCH 469

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L  +DL NN L  LP E+  +  LR ++L+ N  ++    L              R+
Sbjct: 470 LKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLY-------------RI 516

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P  E    S+ +   I      +V  K LS                  ++ LDLS N I 
Sbjct: 517 PSLETILISSNQVGGID-----AVQMKTLS-----------------RLSTLDLSNNDIM 554

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           ++PPEL +C SL+ L+L  N  ++   AIL
Sbjct: 555 QVPPELGNCTSLRALMLDGNPFRNPRAAIL 584



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G  L+ +P+ +W                       E  ++TKL LS N +Q +
Sbjct: 36  SGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSI 95

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P ++    +L  L +  N++   PD+I   L  L  L L +N L ++PS G   +  L+ 
Sbjct: 96  PDDVKLLPALVVLDIHDNQLSSLPDSI-GDLEQLQKLILSHNKLTELPS-GVWRLTNLRC 153

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L  N I  +P +     L +L +L L    L + P  +  LQ L  LDLS N L+S+P
Sbjct: 154 LHLQQNLIEQIPRD--LGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLP 211

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                + +L  LD S N + ++PP L  +
Sbjct: 212 PAISQMKNLRMLDCSRNQMESIPPVLAQM 240


>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
           gorilla gorilla]
          Length = 602

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 294/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+  +    L  L  L+ L L NN L  +P +  K +  LQ ++LS+N
Sbjct: 448 KEMVSDVDLSFNKL-SFISLELCVLQKLTFLDLRNNFLNSLPEE-MKSLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY            I  L+ + I   S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY-----------HIFTLETILI---SNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L  +  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYHIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 201/489 (41%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKTLPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +++  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVN 431

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L ++                    T+ T 
Sbjct: 492 KSLVRLQTINLSFNRFKML---------PEVLYHI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 576

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 577 FRVPRAAIL 585



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G NLS +P  +W                       E  ++TKL +S N +Q L
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSL 97

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L    +L  L +  N++   P AI   L +L  L + +N L+ +P +   ++  L+ 
Sbjct: 98  TDDLRLLPALTVLDIHDNQLTSLPSAI-RELENLQKLNVSHNKLKTLPEE-ITNLRNLKC 155

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L +N +  + E   F  L +L++L L    L   P     L  L  L+LS N L+S+P
Sbjct: 156 LYLQHNELTCISEG--FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLP 213

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                +  L  LD + N +  +PPEL  +
Sbjct: 214 AEINRMKRLKHLDCNSNLLETIPPELAGM 242


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 181/560 (32%), Positives = 285/560 (50%), Gaps = 51/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   EA      G  D+WWE  DL KL+L+
Sbjct: 29  LLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLS 88

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ LP L VL++  N+LS LP +IG+L  L+ L +S N + ++P  +   
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRL 148

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L       N ++++P  LG+ +NL +   SNN +  +PE LA+   + KLD+  NKL 
Sbjct: 149 TNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S+N +  +P  +  +  L +L L  N++  +P  +  C +L 
Sbjct: 209 SLP-PAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  LDL+NN +S LP
Sbjct: 267 ELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E  +       +  +T 
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTF 386

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            ++  +      T K L       + IP ++++A +   +  ++ S+N +  +P      
Sbjct: 387 PSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVP------ 440

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
                     ++I D  D       SL+ + L  N L  +P+D F  +  L  +DL  N 
Sbjct: 441 ----------HRIVDLKD-------SLADINLGFNKLTTIPAD-FCHLKQLMHIDLRNNL 482

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-GFKNL 520
           + SLP       L  L+ + L   + +  P  + R+  L  + +S N +  I     K L
Sbjct: 483 LISLPME--LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTL 540

Query: 521 TSLTELDLSDNNISALPPEL 540
           + L+ LDLS+N+I  +PPEL
Sbjct: 541 SRLSTLDLSNNDIMQVPPEL 560



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ L E++  L  L  L++++N +S LP  +G L  LKSL +  N +  I  ++ 
Sbjct: 294 LRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLL 353

Query: 111 -GSATALVKFDCSSNQ------LKELPSS-----------LGRCLNLSDFKASNNCITSL 152
                 L+K+  S  Q      LKE P +           +     L     S     ++
Sbjct: 354 TKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATI 413

Query: 153 PEDLADC---SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+D+ D    + ++ ++   N+LT + + ++     L ++    N L  +P     L +L
Sbjct: 414 PDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQL 473

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + +DL  N ++S+P  + G   L    +  N   + P  L ++  L T+ + SNQ+    
Sbjct: 474 MHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVG--G 531

Query: 270 VEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           ++A Q+    RLS LDLSNN +  +PPE+G  T+LR L+L GNP R  R++++   T A+
Sbjct: 532 IDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAV 591

Query: 326 LKYLRSRLP 334
           L+YLRSR+P
Sbjct: 592 LEYLRSRIP 600



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 212/516 (41%), Gaps = 83/516 (16%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   L+E+PA++  L++    +   N      D     T L K   SSN+L+ +P  
Sbjct: 39  LNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDD 98

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +     L      +N ++SLP+ + D  ++ KL +  NKLT L                 
Sbjct: 99  VKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTEL----------------- 141

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  +  L+ L  L L QN I  IP  +    +L E  + NN L  +P  L  L
Sbjct: 142 -------PSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANL 194

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL  N+LK       Q++ L +LD S N +  +PP + +M +L +L L  N LR
Sbjct: 195 QNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLR 254

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L       P    LK L     + E  EA   K         LS+    L L    + +
Sbjct: 255 YLPEL----PCCKTLKELHCGNNQIEVLEAEHLKH-----LNALSL----LELRDNKVKS 301

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI     + +LDL+ N I  LP  L +   L++L L  N ++     +LT  +    
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTG-EL 360

Query: 432 LKLDNNPLRQVPSDGFKDIP------------------MLQILDLS-YNIASLPE----- 467
           LK   + +++ P+ G K+ P                   L+ LD S    A++P+     
Sbjct: 361 LKYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDA 420

Query: 468 ---NP---------PFSSLPH--------LQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
              NP           +++PH        L ++ L   +L   P D   L+QL  +DL  
Sbjct: 421 VDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRN 480

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N L S+P   + L  L  + LS N   + P  L  +
Sbjct: 481 NLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRI 516



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 181/450 (40%), Gaps = 104/450 (23%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L +L L++N++  + E L NL  L  L++S NKL  LP AI ++  L+ LD S N 
Sbjct: 170 QLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQ 229

Query: 103 IMKIPD----------------------EIGSATALVKFDCSSNQL-------------- 126
           +  IP                       E+     L +  C +NQ+              
Sbjct: 230 MESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNAL 289

Query: 127 ----------KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                     K LP  +     L     +NN I+SLP  L    K+  L +EGN L  + 
Sbjct: 290 SLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIR 349

Query: 177 NNLIASWT-MLTELIASK------NLLNGMPET-----------IGSLSRLIRLDLHQNR 218
            +L+   T  L + + S+        L   P+T           + ++  L  LD  + +
Sbjct: 350 RDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQ 409

Query: 219 ILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQ 274
             +IP  +        +A      N L+A+P  +  L   L  ++L  N+L     + C 
Sbjct: 410 DATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCH 469

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L  +DL NN L  LP E+  +  LR ++L+ N  ++    L              R+
Sbjct: 470 LKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLY-------------RI 516

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P  E    S+ +   I      +V  K LS                  ++ LDLS N I 
Sbjct: 517 PSLETILISSNQVGGID-----AVQMKTLS-----------------RLSTLDLSNNDIM 554

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           ++PPEL +C SL+ L+L  N  ++   AIL
Sbjct: 555 QVPPELGNCTSLRALMLDGNPFRNPRAAIL 584



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 28/209 (13%)

Query: 359 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 395
           S +L+L G  L+ +P+ +W                       E  ++TKL LS N +Q +
Sbjct: 36  SGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSI 95

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P ++    +L  L +  N++   PD+I   L  L  L L +N L ++PS G   +  L+ 
Sbjct: 96  PDDVKLLPALVVLDIHDNQLSSLPDSI-GDLEQLQKLILSHNKLTELPS-GVWRLTNLRC 153

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L  N I  +P +     L +L EL L    L + P  +  LQ L  LDLS N L+S+P
Sbjct: 154 LHLQQNLIEQIPRD--LGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLP 211

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
                + +L  LD S N + ++PP L  +
Sbjct: 212 PAISQMKNLRMLDCSRNQMESIPPVLAQM 240


>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Monodelphis domestica]
          Length = 598

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 179/560 (31%), Positives = 285/560 (50%), Gaps = 51/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 26  LLKAARKSGQLNLSGRELNEVPQMVWRINLDLPEEANQNHSFNSSERWWEQTDLTKLIIS 85

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LT+L++  N+L+ LP AIGEL  L+ L+VS N +  +P+E+   
Sbjct: 86  NNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKMLPEELTKL 145

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P   G    L D   SNN +T++P   +  SK+ KL++  N++ 
Sbjct: 146 RNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMK 205

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + N L  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 206 NLPAE-ITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLP-EFPSCMLLK 263

Query: 234 EFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  + A  L  L  +  LDL  N+LK    E   L+ L  LDL+NN +  LP
Sbjct: 264 ELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRSLP 323

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  L+N  T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 324 HILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAMTL 383

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSC 402
            ++  V      T K L       + IP E+++A     IT ++ ++N + E+P  +   
Sbjct: 384 PSQSRVNTHAMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIVEL 443

Query: 403 -ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            A++  + L  NK+     A L +L  L  L + NN L  +P +  + +  LQ ++LS+N
Sbjct: 444 KATVCDVNLGFNKL-SCISAELCALHKLIHLDIRNNLLTSLPEE-MEALSRLQTINLSFN 501

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                                   +L+  P  + RL+ L  + L  N L S+ P   + +
Sbjct: 502 ------------------------RLQAFPCVLYRLRTLETVLLGNNQLGSVDPLRLQQM 537

Query: 521 TSLTELDLSDNNISALPPEL 540
             L  LDL +N++  +PPEL
Sbjct: 538 DRLATLDLQNNDLLHVPPEL 557



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 54/339 (15%)

Query: 47  LQKLILAHNNIEKLKE-DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE++    L++L  + VL++  NKL  +P  I  L  L+ LD++ N +  
Sbjct: 262 LKELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRS 321

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL---GRCLNLSDFKA---------SNNCI---T 150
           +P  +G+   L       N L+ +   L   G    L   ++         +++CI    
Sbjct: 322 LPHILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAM 381

Query: 151 SLP-EDLADCSKMSKL---DVEGNKLTVLSNNL---IASWTMLTELIASKNLLNGMPETI 203
           +LP +   +   M+ L   D    K T++ + +   I S T +T +  +KN LN +P+ I
Sbjct: 382 TLPSQSRVNTHAMTTLKLLDYSDKKATLIPDEVFDAIGSNT-ITSINFTKNHLNEIPQRI 440

Query: 204 ------------------------GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                                    +L +LI LD+  N + S+P  +     L    +  
Sbjct: 441 VELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEMEALSRLQTINLSF 500

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIG 295
           N L A P  L +L  L T+ L +NQL    V+  +L    RL+ LDL NN L  +PPE+G
Sbjct: 501 NRLQAFPCVLYRLRTLETVLLGNNQLGS--VDPLRLQQMDRLATLDLQNNDLLHVPPELG 558

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +LR LLL GNP RT R++++   T A+L+YLR R+P
Sbjct: 559 NCVSLRTLLLEGNPFRTPRAAILARGTDAVLEYLRGRIP 597



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 161/377 (42%), Gaps = 44/377 (11%)

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           G+   V+   L+ +     +L  S   LN +P+ +  ++  +  + +QN   +       
Sbjct: 16  GDNCAVVPQGLLKAARKSGQLNLSGRELNEVPQMVWRINLDLPEEANQNHSFNSSERWWE 75

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
              L +  + NN L +L  +L  L  L  LD+H NQL        +L  L  L++S+N L
Sbjct: 76  QTDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKL 135

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP E+ K+  L+ L L  N L  +                   L + ED + S  +  
Sbjct: 136 KMLPEELTKLRNLKVLFLQYNELTCVPEGF-------------GGLDKLEDLDLSNNR-- 180

Query: 348 LITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L T+    S  SK  +L+L    +  +P+EI     +  LD + N ++ +P EL++  SL
Sbjct: 181 LTTVPASFSSLSKLMKLNLASNQMKNLPAEITRMKRLKHLDCTSNYLETIPSELANMESL 240

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           + L L RNK++  P+    S   L  L +  N + ++ +   K +  + +LDL  N    
Sbjct: 241 ELLYLRRNKLRFLPE--FPSCMLLKELHIGENQIEEITAGHLKHLKSVHVLDLRDN---- 294

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
                               +L+  P +I  LQ L  LDL+ N ++S+P     L  L  
Sbjct: 295 --------------------KLKSIPDEITLLQALERLDLTNNDVRSLPHILGTLPHLKF 334

Query: 526 LDLSDNNISALPPELVS 542
           L L  N +  +  EL++
Sbjct: 335 LALEGNPLRTIRRELLN 351



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 181/428 (42%), Gaps = 61/428 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL++  ++++P E+   K          + E +         L+ L L  N +  L E 
Sbjct: 197 LNLASNQMKNLPAEITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLPE- 255

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKS---LDVSFNSIMKIPDEIGSATALVKFD 120
             +  LL  L++  N++ E+ A  G L  LKS   LD+  N +  IPDEI    AL + D
Sbjct: 256 FPSCMLLKELHIGENQIEEITA--GHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLD 313

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            ++N ++ LP  LG   +L       N + ++  +L +      L    +K+   + N  
Sbjct: 314 LTNNDVRSLPHILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQN 373

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS---GCCSLAEFYM 237
            S       + S++ +N       +++ L  LD    +   IP  +    G  ++     
Sbjct: 374 DSCIETAMTLPSQSRVN-----THAMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINF 428

Query: 238 GNNALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             N L+ +P  + +L + +  ++L  N+L     E C L +L  LD+ NN L+ LP E+ 
Sbjct: 429 TKNHLNEIPQRIVELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEME 488

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            ++ L+ + L+ N L+           P +L  LR             T E ++    +L
Sbjct: 489 ALSRLQTINLSFNRLQAF---------PCVLYRLR-------------TLETVLLGNNQL 526

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                         S  P  + +   +  LDL  N +  +PPEL +C SL+TL+L  N  
Sbjct: 527 G-------------SVDPLRLQQMDRLATLDLQNNDLLHVPPELGNCVSLRTLLLEGNPF 573

Query: 416 KDWPDAIL 423
           +    AIL
Sbjct: 574 RTPRAAIL 581



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 28/186 (15%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S +L+L G  L+ +P  +W      +++L      +LP E +   S        N  + W
Sbjct: 33  SGQLNLSGRELNEVPQMVW------RINL------DLPEEANQNHSF-------NSSERW 73

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
            +      + L+ L + NN L+ + SD  + +P L ILD+  N + SLP       L +L
Sbjct: 74  WEQ-----TDLTKLIISNNKLQSL-SDDLRLLPALTILDMHDNQLTSLP--CAIGELENL 125

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           Q+L +   +L+  P ++ +L+ L++L L  N L  +PEGF  L  L +LDLS+N ++ +P
Sbjct: 126 QKLNVSHNKLKMLPEELTKLRNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVP 185

Query: 538 PELVSV 543
               S+
Sbjct: 186 ASFSSL 191


>gi|197632025|gb|ACH70736.1| leucine rich repeat containing 40 [Salmo salar]
          Length = 600

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 183/552 (33%), Positives = 281/552 (50%), Gaps = 32/552 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LK AR SG LNLS R L +VP  V++ N D   EA      G  D+WW+  DL KL+L 
Sbjct: 30  LLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLP 89

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E L ED++ LP LTVL+V  N+L+ LP +IGEL  L+ L +S N + ++P E+ S 
Sbjct: 90  SNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSL 149

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  +G   NL D   SNN +T++P+ L + + + KL++  NKL 
Sbjct: 150 KNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLK 209

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L +  I+    L  L  + N L  +P  +  ++ L +L L  N++  +P   S    L 
Sbjct: 210 SLPSG-ISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L AE L  LS L  L+L  N++K    E   L+ L  LDL NN +S LP
Sbjct: 267 ELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L+ L L GNPLR +R  L+   T  LLKYLR R+ E+ D +     +  +T+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTL 385

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSC 402
            ++  +      T K L      ++ +P ++++A     +  ++ S+N +  +PP L   
Sbjct: 386 PSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRLVEL 445

Query: 403 A-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             S+  + L  NK+   P      L  L+ + L NN L  +P +  + +  L+ + LS+N
Sbjct: 446 KDSVSDINLGFNKLTSLP-LEFCMLQQLAHIDLRNNLLTSLPME-IEALMKLRSITLSFN 503

Query: 462 IASL-PENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKN 519
              L PE      +P L+ + +   Q+    P  +  L +L  LDL  N +  +P    N
Sbjct: 504 RFKLFPE--VLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGN 561

Query: 520 LTSLTELDLSDN 531
            TSL  L L  N
Sbjct: 562 CTSLRALMLDGN 573



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 55/339 (16%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N IE L+ E L++L  L+VL +  NK+  LP  I  L  L+ LD+  N I  
Sbjct: 265 LKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISS 324

Query: 106 IPDEIGSATALVKFDCSSN-----------------------QLKELPSSLG-------- 134
           +P  +     L       N                       ++KE P   G        
Sbjct: 325 LPAALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEPDTAMT 384

Query: 135 ------------RCLNLSDFKASNNCITSLPEDLADC---SKMSKLDVEGNKLTVLSNNL 179
                       + L + D+  S   +  +P+D+ D      ++ ++   N+L  +   L
Sbjct: 385 LPSQAKINVHTIKTLKILDY--SEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRL 442

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +     ++++    N L  +P     L +L  +DL  N + S+P  I     L    +  
Sbjct: 443 VELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSF 502

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIG 295
           N     P  L ++  L T+ + +NQ+    +   QL+    LS LDL NN +  +PPE+G
Sbjct: 503 NRFKLFPEVLYRVPSLETILISNNQVG--AINPLQLKALDKLSTLDLQNNDIMQVPPELG 560

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             T+LR L+L GNP R  R+++V+  T A+L+YLRSR+P
Sbjct: 561 NCTSLRALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIP 599



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 204/493 (41%), Gaps = 122/493 (24%)

Query: 14  LNLSNRSLRDVPNEVY--KNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKED 63
           L+LS+  L+++P EV+  KN      +    +   E V    +L  + L++N +  + + 
Sbjct: 132 LSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDS 191

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L NL  L  LN+SHNKL  LP+ I  +  L+ LD + N +  IP  +    +L +     
Sbjct: 192 LGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRH 251

Query: 124 NQLK---ELPSS------LGR------------------CLNLSDFKAS----------- 145
           N+L+   ELPSS      +G                    L L D K             
Sbjct: 252 NKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQG 311

Query: 146 -------NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
                  NN I+SLP  LA   K+  L +EGN L  +  +L+   T   EL+     L G
Sbjct: 312 LERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLLTKGT--NELL---KYLRG 366

Query: 199 M-----------PETIGSLSRLIRLDLHQNRILSI-----------PSSI---SGCCSLA 233
                       P+T  +L    ++++H  + L I           P  +    G   +A
Sbjct: 367 RIKEDPDGKGDEPDTAMTLPSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVA 426

Query: 234 EFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
                 N L+A+P  L +L   +  ++L  N+L    +E C L+ L+ +DL NN L+ LP
Sbjct: 427 SVNFSKNQLAAVPPRLVELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLP 486

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
            EI  +  LR + L+ N  +     L   P+                            +
Sbjct: 487 MEIEALMKLRSITLSFNRFKLFPEVLYRVPS----------------------------L 518

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T L   ++  ++  + L A+        +++ LDL  N I ++PPEL +C SL+ L+L 
Sbjct: 519 ETILISNNQVGAINPLQLKAL-------DKLSTLDLQNNDIMQVPPELGNCTSLRALMLD 571

Query: 412 RNKIKDWPDAILT 424
            N  ++   AI++
Sbjct: 572 GNPFRNPRAAIVS 584



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 42/336 (12%)

Query: 231 SLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS- 288
           S A F       +A+P  L K + K G L+L    L E      +L L   + +  +LS 
Sbjct: 12  SRAGFRTEKEEPAAVPYGLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF 71

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
           G        T L KLLL  N L  L   +   P   +L      + +N+ +   T+  +L
Sbjct: 72  GADDRWWDQTDLTKLLLPSNKLEALSEDVKLLPALTVLD-----VHDNQLTSLPTSIGEL 126

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             +        ++LSL    L  +P E+W    +T L L +N ++ LP  +    +L  +
Sbjct: 127 QHL--------QKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDI 178

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   PD+ L +L+ L  L L +N L+ +PS G   +  L++LD ++N + S+P 
Sbjct: 179 DLSNNQLTAVPDS-LGNLNHLVKLNLSHNKLKSLPS-GISVMKNLRLLDCTHNQLESIP- 235

Query: 468 NPPFSSLPHLQELYLRRMQLR---EAPTDILR-------------------LQQLRILDL 505
            P  S +  L++LYLR  +LR   E P+  L+                   L  L +L+L
Sbjct: 236 -PVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLEL 294

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             N ++++PE  + L  L  LDL +N+IS+LP  L 
Sbjct: 295 RDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALA 330



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 29/272 (10%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRL 333
           L+VLD+ +N L+ LP  IG++  L+KL L+ N L+ L     SL N     L + L   L
Sbjct: 106 LTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHL 165

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           PE             + + T L     ++ L    L+A+P  +     + KL+LS N ++
Sbjct: 166 PEG------------VGLLTNLD----DIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLK 209

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR---QVPSDGFKDI 450
            LP  +S   +L+ L  + N+++  P  +L+ ++SL  L L +N LR   ++PS   K+ 
Sbjct: 210 SLPSGISVMKNLRLLDCTHNQLESIP-PVLSQMASLEQLYLRHNKLRFLPELPSSRLKE- 267

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
                L +  N   + E      L  L  L LR  +++  P +I  LQ L  LDL  N +
Sbjct: 268 -----LHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDI 322

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            S+P     L  L  L L  N +  +  +L++
Sbjct: 323 SSLPAALALLPKLKILTLEGNPLRGIRRDLLT 354


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 173/534 (32%), Positives = 274/534 (51%), Gaps = 48/534 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E ++N    G  D+WWE  DL KLILA N ++ L ED+R LP L+VL+V  N+L+ 
Sbjct: 193 DTPEEAHQNLS-FGAADRWWEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTS 251

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+A+G+L  L+ LDVS N +  IP+E+   + L       N+L  LP   G+ ++L + 
Sbjct: 252 LPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEEL 311

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   A    + +L++  N+L  L  + I++   L +L  +KN L  +P  
Sbjct: 312 DLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPAD-ISAMKSLKQLDCTKNYLETVPSE 370

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S++ L +L L +N++ S+P  +  C  L E + G N +  L AE L  L+ L  L+L 
Sbjct: 371 LASMASLEQLYLRKNKLRSLP-ELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELR 429

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N++K    E   L +L  LDL+NN +S LP  +G ++ L+ L L GNPLR +R  L+  
Sbjct: 430 DNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRAIRRDLLQK 489

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSA 371
            T  LLKYLRSR+   +D  AS  +E  +T  T  S          T K L       + 
Sbjct: 490 GTQELLKYLRSRI---QDDTASPNEEPPVTAMTLPSESKINMHAITTLKLLEFSEKQAAV 546

Query: 372 IPSEIWEA---GEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLS 427
           IP +++ A     +T ++ S+N +  +PP +     S+  +    NKI       L +L 
Sbjct: 547 IPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSV-SLELCTLH 605

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
            L+ L + NN L  +P +  + +  LQ+++LS+N                        + 
Sbjct: 606 KLTHLDIRNNVLTSLPEE-MEALTRLQVINLSFN------------------------RF 640

Query: 488 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
           +  P+ + R+  L  + LS N + S+ P   K +  L  LDL +N++  +PPEL
Sbjct: 641 KVFPSVLYRILTLETILLSNNQVGSVDPLQLKKMEQLGTLDLQNNDLLQVPPEL 694



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 52/338 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L++L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 399 LKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 458

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGR----------------------------CL 137
           +P  +G+ + L       N L+ +   L +                             +
Sbjct: 459 LPYTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDDTASPNEEPPVTAM 518

Query: 138 NL-SDFKASNNCITSL-------------PEDLADCSK---MSKLDVEGNKLTVLSNNLI 180
            L S+ K + + IT+L             P+D+ +  +   ++ ++   N+LT +   ++
Sbjct: 519 TLPSESKINMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIV 578

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                + ++    N ++ +   + +L +L  LD+  N + S+P  +     L    +  N
Sbjct: 579 ELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFN 638

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGK 296
                P+ L ++  L T+ L +NQ+    V+  QL+    L  LDL NN L  +PPE+G 
Sbjct: 639 RFKVFPSVLYRILTLETILLSNNQVGS--VDPLQLKKMEQLGTLDLQNNDLLQVPPELGN 696

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 697 CETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 734



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 184/458 (40%), Gaps = 110/458 (24%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + + V L++L L++N++  +      L  L  LN++ N+L  LPA I  +  LK LD 
Sbjct: 300 DGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPADISAMKSLKQLDC 359

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA-------------- 144
           + N +  +P E+ S  +L +     N+L+ LP  L  C  L +  A              
Sbjct: 360 TKNYLETVPSELASMASLEQLYLRKNKLRSLPE-LPSCKLLKELHAGENQIEILNAENLK 418

Query: 145 ---------------------------------SNNCITSLPEDLADCSKMSKLDVEGNK 171
                                            +NN I+ LP  L + S++  L +EGN 
Sbjct: 419 HLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNP 478

Query: 172 LTVLSNNLIASWTM---------LTELIASKNLLNGMPETIGSLSRLIRLDLH------- 215
           L  +  +L+   T          + +  AS N     P T  +L    ++++H       
Sbjct: 479 LRAIRRDLLQKGTQELLKYLRSRIQDDTASPN--EEPPVTAMTLPSESKINMHAITTLKL 536

Query: 216 ----QNRILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKE 267
               + +   IP  +        +       N L+A+P  + +L   +  ++   N++  
Sbjct: 537 LEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISS 596

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             +E C L +L+ LD+ NN L+ LP E+  +T L+ + L+ N  +   S L         
Sbjct: 597 VSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVLYR------- 649

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                                ++T+ T L   ++  S++       P ++ +  ++  LD
Sbjct: 650 ---------------------ILTLETILLSNNQVGSVD-------PLQLKKMEQLGTLD 681

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           L  N + ++PPEL +C +L+TL+L  N  +    AIL 
Sbjct: 682 LQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILA 719



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 6/191 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R+++ + E + + ++  A     WE  ++TKL L+ N +Q L  ++    +L  L +  N
Sbjct: 189 RINLDTPEEAHQNLSFGAA-DRWWEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDN 247

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P A L  L +L  L + +N L+ +P +  + +  L+ L L +N ++ LP+   F 
Sbjct: 248 QLTSLPSA-LGQLENLQKLDVSHNKLKSIPEELLQ-LSHLKSLLLQHNELSHLPDG--FG 303

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L+EL L    L + PT    L  L  L+L+ N L+++P     + SL +LD + N 
Sbjct: 304 QLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNY 363

Query: 533 ISALPPELVSV 543
           +  +P EL S+
Sbjct: 364 LETVPSELASM 374


>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 615

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 291/560 (51%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 44  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 103

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L++S N +  +P+EI + 
Sbjct: 104 NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNL 163

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 164 RNLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 223

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 224 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 281

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L  L  LDLSNN +S LP
Sbjct: 282 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLP 341

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 342 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATETAMTL 400

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 401 PSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVEL 460

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             + + + LS NK+       L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 461 KEMVSDVNLSFNKLSSI-SLELCMLQKLTFLDLRNNFLNSLPEE-MELLVRLQTINLSFN 518

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 519 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSMDPQKMKMM 554

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 555 ENLTTLDLQNNDLLQIPPEL 574



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  LH L+ LD+S N I  
Sbjct: 280 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISS 339

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D ++     
Sbjct: 340 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATETAMT 399

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 400 LPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVE 459

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 460 LKEMVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNR 519

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 520 FKMLPEVLYRIFTLETILISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 579

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 580 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 614



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 197/491 (40%), Gaps = 119/491 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +  +L+ L L++N +  + 
Sbjct: 146 LNISHNKLKILPEEITNLRNLKCLYLQHNELICISEG--FEQLSNLEDLDLSNNRLTTVP 203

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L     
Sbjct: 204 ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYL 263

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 264 RRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIIL 323

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 324 LHSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 382

Query: 195 LLNG------MPETIGSLSRLIRLDLHQNRILS-----------IPSSISGCCS---LAE 234
             +G        ET  +L    R+++H    L            IP  +        +  
Sbjct: 383 KDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITS 442

Query: 235 FYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 443 VNFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPE 502

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  + L         P +L  +                    T+ 
Sbjct: 503 EMELLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLE 534

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T L   ++  S++       P ++     +T LDL  N + ++PPEL +C +L+TL+L  
Sbjct: 535 TILISNNQVGSMD-------PQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDG 587

Query: 413 NKIKDWPDAIL 423
           N  +    AIL
Sbjct: 588 NPFRVPRAAIL 598



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 26/162 (16%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +T LD+  N +  LP  +   A+LQ L +S NK+K  P+ I T+L +L CL L +N L  
Sbjct: 120 LTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEI-TNLRNLKCLYLQHNELIC 178

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           + S+GF+ +  L+ LDLS N                        +L   P     L  L 
Sbjct: 179 I-SEGFEQLSNLEDLDLSNN------------------------RLTTVPASFSSLSSLV 213

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+LS N L+S+P     +  L  LD + N +  +PPEL  +
Sbjct: 214 RLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGM 255


>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
           jacchus]
          Length = 602

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 186/560 (33%), Positives = 292/560 (52%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L++S N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  +L D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELICISEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L  L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYL+S++ ++  S+  +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N I E+P  +   
Sbjct: 388 PSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQICEIPKRMVEL 447

Query: 403 A-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             ++  + LS NK+       L  L  L+ L L NN L  +P +  + +  LQ ++LS+N
Sbjct: 448 KETVSDVNLSFNKLSSI-SLELCMLQKLTFLDLRNNFLNSLPEE-MELLVRLQTINLSFN 505

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
                    F  LP +  LY              R+  L  + +S N + S+ P+  K +
Sbjct: 506 --------RFKMLPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +LT LDL +N++  +PPEL
Sbjct: 542 ENLTTLDLQNNDLLQIPPEL 561



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 216/515 (41%), Gaps = 82/515 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   LSE+P  +  +++    + + N      +     T L K   S+N+L+ L   
Sbjct: 41  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDD 100

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L     L+     +N +TSLP  + + + + KL++  NKL +L                 
Sbjct: 101 LRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKIL----------------- 143

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  PE I +L  L  L L  N ++ I        SL +  + NN L+ +PA    L
Sbjct: 144 -------PEEITNLRNLKCLYLQHNELICISEGFEQLSSLEDLDLSNNRLTTVPASFSSL 196

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           S L  L+L SNQLK    E  ++ RL  LD ++N L  +PPE+  M +L  L L  N LR
Sbjct: 197 SSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKLR 256

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L       P+ +LLK L     + E  EA    E L  + + L      L L    L +
Sbjct: 257 FLPE----FPSCSLLKELHVGENQIEMLEA----EHLKHLNSILV-----LDLRDNKLKS 303

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS-----L 426
           +P EI     + +LDLS N I  LP  L +   L+ L L  N ++     I+       L
Sbjct: 304 VPDEIILLHSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVL 362

Query: 427 SSLSCLKLDNNPLRQ---------VPSD---GFKDIPMLQILDLSYNIASLPENPPFSSL 474
             L     D+ P ++         +PS+       I  L++LD S   A+L  +  F ++
Sbjct: 363 KYLQSKIKDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAV 422

Query: 475 P------------HLQELYLRRMQLREAPTDI--------------LRLQQLRILDLSQN 508
                         + E+  R ++L+E  +D+                LQ+L  LDL  N
Sbjct: 423 KSNIITSVNFSKNQICEIPKRMVELKETVSDVNLSFNKLSSISLELCMLQKLTFLDLRNN 482

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L S+PE  + L  L  ++LS N    LP  L  +
Sbjct: 483 FLNSLPEEMELLVRLQTINLSFNRFKMLPEVLYRI 517



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  LH L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N++  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQICEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               ++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKETVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 197/491 (40%), Gaps = 119/491 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +   L+ L L++N +  + 
Sbjct: 133 LNISHNKLKILPEEITNLRNLKCLYLQHNELICISEG--FEQLSSLEDLDLSNNRLTTVP 190

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+ +  +L     
Sbjct: 191 ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAAMESLELLYL 250

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 251 RRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIIL 310

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 311 LHSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKI 369

Query: 195 LLNG------MPETIGSLSRLIRLDLHQNRILS-----------IPSSISGCCS---LAE 234
             +G        ET  +L    R+++H    L            IP  +        +  
Sbjct: 370 KDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITS 429

Query: 235 FYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N +  +P  + +L + +  ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 430 VNFSKNQICEIPKRMVELKETVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPE 489

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  + L         P +L  +                    T+ 
Sbjct: 490 EMELLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLE 521

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+TL+L  
Sbjct: 522 TIL-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDG 574

Query: 413 NKIKDWPDAIL 423
           N  +    AIL
Sbjct: 575 NPFRVPRAAIL 585


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 177/528 (33%), Positives = 276/528 (52%), Gaps = 30/528 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E  +N    G  D+WWE  DL KLIL++N ++ L +DLR LP LTVL+V  N+L+ 
Sbjct: 69  DTPEEANQNLS-FGAADRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLAS 127

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP A+GEL  L+ L+VS N +  +P+EI +   L      +N+L  +P   G+ LNL + 
Sbjct: 128 LPCAVGELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEEL 187

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN ++S+P   +  + + +L++  N+L  L    I+    L +L  + NLL  +P  
Sbjct: 188 DISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTE-ISGMKRLKQLDCTCNLLETIPSE 246

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S+  L  L L +N++ SIP     C SL E ++G N +  + AE L  LS +  LDL 
Sbjct: 247 LASMESLELLYLRRNKLRSIP-EFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLR 305

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDL+NN +S LP  +G +  L+ L L GNP+RT+R  L+  
Sbjct: 306 DNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLTK 365

Query: 321 PTPALLKYLRSRL-----PENEDSEASTTKEDLITMATRLS----VTSKELSLEGMNLSA 371
            T  L+KYLRS++     P+NE +   T     +   +R++    VT K L       +A
Sbjct: 366 GTQELMKYLRSKIKDDAPPQNETTTTGTAMT--LPSESRVNVHAIVTLKILEYSEKQTTA 423

Query: 372 IPSEIWEA---GEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLS 427
           IP E+++A     +T ++ S+N + E+P  +     ++  + LS NK+      I + L 
Sbjct: 424 IPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKETVSDVNLSFNKLSLISLEI-SVLQ 482

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
            L+ L + NN L  +P D    +  LQ ++LS+N   + P+      +P L+ +     Q
Sbjct: 483 KLTHLDIRNNLLTALP-DEMSALKKLQTINLSFNRFKTFPD--VLYCIPTLETILFSNNQ 539

Query: 487 LREAPTDILRLQ---QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           +     D LR++   +L  LDL  N L  +P    N  +L  L L  N
Sbjct: 540 V--GSVDALRMKKMDKLATLDLQNNDLLQVPPELGNCMTLRTLLLEGN 585



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 157/338 (46%), Gaps = 51/338 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE +  E L++L  + VL++  NKL  +P  I  L  L+ LD++ N I  
Sbjct: 275 LKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISS 334

Query: 106 IPDEIGSATAL------------VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS-- 151
           +P  +G+   L            ++ D  +   +EL   L R     D    N   T+  
Sbjct: 335 LPYALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYL-RSKIKDDAPPQNETTTTGT 393

Query: 152 ---LPED----LADCSKMSKLDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPET 202
              LP +    +     +  L+    + T + + +        +T +  SKN LN +P+ 
Sbjct: 394 AMTLPSESRVNVHAIVTLKILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKR 453

Query: 203 IGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           I  L   +  ++L  N++  I   IS    L    + NN L+ALP E+  L KL T++L 
Sbjct: 454 IVELKETVSDVNLSFNKLSLISLEISVLQKLTHLDIRNNLLTALPDEMSALKKLQTINLS 513

Query: 262 SNQLKE-----YC----------------VEACQLR----LSVLDLSNNSLSGLPPEIGK 296
            N+ K      YC                V+A +++    L+ LDL NN L  +PPE+G 
Sbjct: 514 FNRFKTFPDVLYCIPTLETILFSNNQVGSVDALRMKKMDKLATLDLQNNDLLQVPPELGN 573

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             TLR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 574 CMTLRTLLLEGNPFRIPRAAILAKGTAAVLEYLRDRIP 611



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 43/263 (16%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+VLD+ +N L+ LP  +G++  L++L ++ N L+ L         P  +K LR+     
Sbjct: 115 LTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKIL---------PEEIKNLRNL---- 161

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                  K L L+   L+ IP    +   + +LD+S N +  +P
Sbjct: 162 -----------------------KSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVP 198

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
              S+  +L  L L+RN++K  P  I + +  L  L    N L  +PS+    +  L++L
Sbjct: 199 ASFSTLTNLVRLNLARNQLKSLPTEI-SGMKRLKQLDCTCNLLETIPSE-LASMESLELL 256

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 514
            L  N + S+PE P   SL   +EL++   Q+     + L+ L  + +LDL  N L+SIP
Sbjct: 257 YLRRNKLRSIPEFPFCRSL---KELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIP 313

Query: 515 EGFKNLTSLTELDLSDNNISALP 537
           +    L +L  LDL++N+IS+LP
Sbjct: 314 DEITLLQALERLDLTNNDISSLP 336



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 63/353 (17%)

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
           A++NL  G  +     + L +L L  N++ ++   +    +L    + +N L++LP  +G
Sbjct: 74  ANQNLSFGAADRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVG 133

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L++  N+LK    E   LR L  L L NN L+ +P   G++  L +L ++ N 
Sbjct: 134 ELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNH 193

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L ++ +S        L   +R  L  N+                               L
Sbjct: 194 LSSVPASF-----STLTNLVRLNLARNQ-------------------------------L 217

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
            ++P+EI     + +LD + N ++ +P EL+S  SL+ L L RNK++  P+       SL
Sbjct: 218 KSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRSIPE--FPFCRSL 275

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L +  N +  + ++  K +  + +LDL  N                        +L+ 
Sbjct: 276 KELHVGENQIEVIGAEHLKHLSSINVLDLRDN------------------------KLKS 311

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            P +I  LQ L  LDL+ N + S+P    NL  L  L L  N +  +  +L++
Sbjct: 312 IPDEITLLQALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLT 364



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 105/491 (21%), Positives = 196/491 (39%), Gaps = 117/491 (23%)

Query: 14  LNLSNRSLRDVPNEVYKN-------FDEAGE----GDKWWEAVDLQKLILAHNNIEKLKE 62
           LN+S+  L+ +P E+ KN       F +  E     + + + ++L++L +++N++  +  
Sbjct: 141 LNVSHNKLKILPEEI-KNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPA 199

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV----- 117
               L  L  LN++ N+L  LP  I  +  LK LD + N +  IP E+ S  +L      
Sbjct: 200 SFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLR 259

Query: 118 -----------------------------------------KFDCSSNQLKELPSSLGRC 136
                                                      D   N+LK +P  +   
Sbjct: 260 RNKLRSIPEFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLL 319

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNL 195
             L     +NN I+SLP  L +   +  L +EGN +  +  +L+   T  L + + SK  
Sbjct: 320 QALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKIK 379

Query: 196 LNGMPET------------------IGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAE 234
            +  P+                   + ++  L  L+  + +  +IP  +    G  ++  
Sbjct: 380 DDAPPQNETTTTGTAMTLPSESRVNVHAIVTLKILEYSEKQTTAIPDEVFDAVGRNTVTS 439

Query: 235 FYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L+ +P  + +L + +  ++L  N+L    +E   L +L+ LD+ NN L+ LP 
Sbjct: 440 INFSKNQLNEVPKRIVELKETVSDVNLSFNKLSLISLEISVLQKLTHLDIRNNLLTALPD 499

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  +T    L   PT                            + 
Sbjct: 500 EMSALKKLQTINLSFNRFKTFPDVLYCIPT----------------------------LE 531

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T L   ++  S++ + +  +        ++  LDL  N + ++PPEL +C +L+TL+L  
Sbjct: 532 TILFSNNQVGSVDALRMKKM-------DKLATLDLQNNDLLQVPPELGNCMTLRTLLLEG 584

Query: 413 NKIKDWPDAIL 423
           N  +    AIL
Sbjct: 585 NPFRIPRAAIL 595



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 5/168 (2%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WE  ++TKL LS N +Q L  +L    +L  L +  N++   P A+   L +L  L + +
Sbjct: 87  WEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAV-GELENLQRLNVSH 145

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L+ +P +  K++  L+ L L  N +  +PE   F  L +L+EL +    L   P    
Sbjct: 146 NKLKILPEE-IKNLRNLKSLFLQNNELTCIPEG--FGQLLNLEELDISNNHLSSVPASFS 202

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L  L  L+L++N L+S+P     +  L +LD + N +  +P EL S+
Sbjct: 203 TLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASM 250


>gi|390332547|ref|XP_797039.3| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Strongylocentrotus purpuratus]
          Length = 702

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 176/579 (30%), Positives = 289/579 (49%), Gaps = 47/579 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVY----------KNFDEAGEGDKWWEAVDLQKLILA 53
           ILK AR+SG LNLSNRSL  VP  V+          KN     + ++WW+  +L KLILA
Sbjct: 35  ILKQARSSGQLNLSNRSLTTVPQSVWNINTDVPPESKNVSLDNQDERWWDQNELVKLILA 94

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E+L  D++ LP LTVL+V  NKL+ LP AIGEL  L+ L++S N + ++P E+   
Sbjct: 95  SNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLTELPSELSQL 154

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L+      N++  L   LG   +L +   SNN ++ LPE +    K+  L+   N+L 
Sbjct: 155 HDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRKLRSLNASENQLE 214

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +    I +   +  L  S N L  +P  +G +S L ++ +  NRI S+P   + C  L 
Sbjct: 215 FIPTT-IGNLKGVRMLELSSNRLPALPLEMGYMSALEQIHIKFNRITSLPP-FTKCKDLK 272

Query: 234 EFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E + GNN ++ L  EL   LS L  LDL  N++     E  Q+  L+  +++NN++S LP
Sbjct: 273 ELHAGNNNITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANNNVSSLP 332

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLIT 350
            ++G + +L+ +++ GNP+R +R  ++   T  L+KYLRSR+ E  ED+  S++  D  +
Sbjct: 333 YKLGNLRSLKAMVVDGNPMRGIRXXILQRGTVELMKYLRSRIEETPEDTPDSSSASDPSS 392

Query: 351 MATRL-SVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQ 406
           +  R  +V  K L         IP  +WE  +   +T ++ S+N + E+P        LQ
Sbjct: 393 VIGRTDAVAGKTLDYSNKKSGTIPVSLWEPAKESGVTAVNFSKNMLTEVPANKGEKEPLQ 452

Query: 407 TLILS------------RNKIKDWPD------------AILTSLSSLSCLKLD--NNPLR 440
                            R++I++ P+            +IL    +++   LD  N    
Sbjct: 453 NKYFYHNRGTVELMKYLRSRIEETPEDTPDSSSASDPSSILGRTDAVAGKTLDYSNKKSG 512

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ--ELYLRRMQLREAPTDILRLQ 498
            +P   ++      +  ++++   L E P    L H    ++ L   ++   PT++  + 
Sbjct: 513 TIPVSLWEPAKESGVTAVNFSKNMLTEVPANLILLHKTAVDVNLSVNKIPTLPTEMQMMV 572

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +  LDL  N L SIP  F+ ++ + EL +S N  S +P
Sbjct: 573 NITRLDLGSNGLSSIPSEFETMSMMRELVISYNRFSKVP 611



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 13/276 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFN----SIMK-----IPDEIGSATALVKFD 120
           +T +N S N L+E+PA  GE   L++     N     +MK     I +            
Sbjct: 428 VTAVNFSKNMLTEVPANKGEKEPLQNKYFYHNRGTVELMKYLRSRIEETPEDTPDSSSAS 487

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             S+ L    +  G+ L+ S+ K S     SL E  A  S ++ ++   N LT +  NLI
Sbjct: 488 DPSSILGRTDAVAGKTLDYSN-KKSGTIPVSLWEP-AKESGVTAVNFSKNMLTEVPANLI 545

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                  ++  S N +  +P  +  +  + RLDL  N + SIPS       + E  +  N
Sbjct: 546 LLHKTAVDVNLSVNKIPTLPTEMQMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYN 605

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
             S +P  +   + L TL  + NQ+ +  +   +   ++S LDL NN +  +PPE+G  T
Sbjct: 606 RFSKVPDVVFTWTNLETLLANGNQIGDIDLTGFKRLTKISTLDLQNNDIGEVPPELGTFT 665

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR LLL GN  R  R +++N  T ALL YLR R+P
Sbjct: 666 SLRSLLLAGNRFRNPRPAILNKGTVALLAYLRDRIP 701



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 46/292 (15%)

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           ++L  L L SN+L++   +   L  L+VLD+ +N L+ LP  IG++  L++L ++ N L 
Sbjct: 86  NELVKLILASNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLT 145

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L S L             S+L             DL+            L ++   +S 
Sbjct: 146 ELPSEL-------------SQL------------HDLLF-----------LHVQHNKISV 169

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +   + E   +  LD+S N + ELP  + S   L++L  S N+++  P  I  +L  +  
Sbjct: 170 LQDGLGELNHLENLDVSNNQLSELPESIGSLRKLRSLNASENQLEFIPTTI-GNLKGVRM 228

Query: 432 LKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
           L+L +N L  +P + G+  +  L+ + + +N I SLP   PF+    L+EL+     + E
Sbjct: 229 LELSSNRLPALPLEMGY--MSALEQIHIKFNRITSLP---PFTKCKDLKELHAGNNNITE 283

Query: 490 APTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              ++L+ L  L +LDL  N +  IPE    +T+LT  ++++NN+S+LP +L
Sbjct: 284 LSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANNNVSSLPYKL 335



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 3/164 (1%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W+  E+ KL L+ N +++L  ++    +L  L +  NK+   P AI   L +L  L + +
Sbjct: 83  WDQNELVKLILASNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAI-GELRNLQRLNISH 141

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L ++PS+    +  L  L + +N  S+ ++     L HL+ L +   QL E P  I  
Sbjct: 142 NCLTELPSE-LSQLHDLLFLHVQHNKISVLQDG-LGELNHLENLDVSNNQLSELPESIGS 199

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L++LR L+ S+N L+ IP    NL  +  L+LS N + ALP E+
Sbjct: 200 LRKLRSLNASENQLEFIPTTIGNLKGVRMLELSSNRLPALPLEM 243



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           AVD+    L+ N I  L  +++ +  +T L++  N LS +P+    + M++ L +S+N  
Sbjct: 551 AVDVN---LSVNKIPTLPTEMQMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYNRF 607

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELP-SSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            K+PD + + T L     + NQ+ ++  +   R   +S     NN I  +P +L   + +
Sbjct: 608 SKVPDVVFTWTNLETLLANGNQIGDIDLTGFKRLTKISTLDLQNNDIGEVPPELGTFTSL 667

Query: 163 SKLDVEGNKL 172
             L + GN+ 
Sbjct: 668 RSLLLAGNRF 677



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           +S +L+L   +L+ +P  +W            N   ++PPE S   SL       N+ + 
Sbjct: 41  SSGQLNLSNRSLTTVPQSVW------------NINTDVPPE-SKNVSLD------NQDER 81

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
           W D      + L  L L +N L Q+ +D  + +P L +LD+  N + SLP       L +
Sbjct: 82  WWDQ-----NELVKLILASNKLEQLSND-IQLLPALTVLDVHDNKLNSLPT--AIGELRN 133

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ L +    L E P+++ +L  L  L +  N +  + +G   L  L  LD+S+N +S L
Sbjct: 134 LQRLNISHNCLTELPSELSQLHDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSEL 193

Query: 537 PPELVSV 543
           P  + S+
Sbjct: 194 PESIGSL 200



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           ++ V    L L    LS+IPSE      + +L +S N   ++P  + +  +L+TL+ + N
Sbjct: 569 QMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYNRFSKVPDVVFTWTNLETLLANGN 628

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +I D        L+ +S L L NN + +VP +
Sbjct: 629 QIGDIDLTGFKRLTKISTLDLQNNDIGEVPPE 660


>gi|405971281|gb|EKC36127.1| Leucine-rich repeat-containing protein 40 [Crassostrea gigas]
          Length = 606

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 185/589 (31%), Positives = 277/589 (47%), Gaps = 104/589 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           ILK AR +G LNLS R+L  VP+ V++ N D   E          ++WWE  +L KLILA
Sbjct: 29  ILKQARKTGQLNLSGRNLSTVPDTVWRLNLDVPEEARDVSLDNTDERWWEQTELTKLILA 88

Query: 54  ----------------------HNN-IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
                                 H+N +E L + +R L  L  L+VS NKL ELP ++  L
Sbjct: 89  SNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLKELPESVTYL 148

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L+SL V +N ++++ + IG    L   D S+NQL ELP  +G   ++  F  SNN ++
Sbjct: 149 RNLRSLHVEYNELVRVSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLS 208

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           SLP ++   + +  LDV  N+LT L                        PE +G+L  L 
Sbjct: 209 SLPPEIGSMNALKCLDVTHNQLTHL------------------------PEDLGNLPNLE 244

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYC 269
           +L L  N++  IP  +  C +L E ++GNN +  + AE L  L  +  LD+  N++ E  
Sbjct: 245 QLYLRHNQLSGIPL-LKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELP 303

Query: 270 VE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E  C   L  LDL+NN L+GLP  +G +T+L+ ++L GNP++++R  ++   T  L KY
Sbjct: 304 EEITCLSGLQRLDLTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKY 363

Query: 329 LRSRL-------PENEDSEASTTKEDLITMATRLSV----TSKELSLEGMNLSAIPSEIW 377
           L SR+       P N+  +       +      L       SK L       +A+P +IW
Sbjct: 364 LCSRIEDPQPVEPTNKGIQNGGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIW 423

Query: 378 EAG---EITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKI-KDWPDAILTSLSSLSCL 432
           E      +T ++LS+N   +LP  L    S L+      NK+ K  PD  L     L+ L
Sbjct: 424 EVAMKAGVTSVNLSKNQFTDLPSNLILLESTLKEFNFGFNKLTKLNPDISL--FLRLTTL 481

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L NN L  +P D                           SL  ++E+ L   +    P+
Sbjct: 482 DLRNNGLSDLPRD-------------------------MESLQDMREIVLSCNRFTTLPS 516

Query: 493 DILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
            +  +++L I+    N + +I   GFKNL  L  LDL +NNI  +PPEL
Sbjct: 517 SLYEMKKLEIIFADNNKITTIDAAGFKNLPMLATLDLQNNNIDQVPPEL 565



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 57/343 (16%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +L+++ L +N I K+  E L++L  +TVL++  NK+SELP  I  L  L+ LD++ N + 
Sbjct: 264 NLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLT 323

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            +P  +G+ T+L       N +K +   +                               
Sbjct: 324 GLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEPTNKGIQN 383

Query: 134 ----------GRCLNLSDFKAS------NNCITSLPEDLADCS---KMSKLDVEGNKLTV 174
                     G  L   D + S      N   T++P+D+ + +    ++ +++  N+ T 
Sbjct: 384 GGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTD 443

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L +NLI   + L E     N L  +   I    RL  LDL  N +  +P  +     + E
Sbjct: 444 LPSNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMRE 503

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGL 290
             +  N  + LP+ L ++ KL  +   +N++    ++A   +    L+ LDL NN++  +
Sbjct: 504 IVLSCNRFTTLPSSLYEMKKLEIIFADNNKIT--TIDAAGFKNLPMLATLDLQNNNIDQV 561

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           PPE+G  T ++ LLL GN  R  R +++   T ALL+YLRSR+
Sbjct: 562 PPELGNCTQIKSLLLNGNAFRNPRPAILTKGTLALLEYLRSRI 604



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 21/292 (7%)

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           ++L  L L SN L E   E    + LSVLD+ +N L  LP  I ++  L KL ++ N L+
Sbjct: 80  TELTKLILASNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLK 139

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNL 369
            L  S+        L+ LRS   E           +L+ ++  +    K  +L L    L
Sbjct: 140 ELPESV------TYLRNLRSLHVE---------YNELVRVSEGIGHLDKLEDLDLSNNQL 184

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           S +P ++     + K ++S N +  LPPE+ S  +L+ L ++ N++   P+  L +L +L
Sbjct: 185 SELPPQVGHLYHVLKFNVSNNRLSSLPPEIGSMNALKCLDVTHNQLTHLPED-LGNLPNL 243

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L +N L  +P    K+   L+ + L  N            L  +  L +R  ++ E
Sbjct: 244 EQLYLRHNQLSGIPL--LKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISE 301

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            P +I  L  L+ LDL+ N L  +P     +TSL  + L  N + ++  +++
Sbjct: 302 LPEEITCLSGLQRLDLTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDII 353


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 172/531 (32%), Positives = 278/531 (52%), Gaps = 43/531 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 20  DIPEEANQNLSFSA-TERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 78

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 79  LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDL 138

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNNC+T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 139 DISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAE-ISGMKRLKHLDCNSNLLESIPSE 197

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           +  +  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 198 LAGMESLELLYLRRNKLRFLP-EFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLR 256

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  ++N 
Sbjct: 257 DNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREIINK 315

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++   ++ +  E  +T+   +R++V    T K L       + IP 
Sbjct: 316 GTQEVLKYLRSKIKDDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPD 375

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLS 430
           E+++A +   +T ++ S+N + E+P  +     + + + L  NK+       L  L  LS
Sbjct: 376 EVFDAVKSNIVTSINFSKNQLCEIPKRIIELKEMVSDVNLGFNKL-SLISLELCMLQKLS 434

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY         
Sbjct: 435 FLDLRNNFLNSLPEE-MESLIRLQTINLSFN--------RFKILPEV--LY--------- 474

Query: 491 PTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
                R+  L  + +S N + S+ PE  K + +L  LDL +N++  +PPEL
Sbjct: 475 -----RISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPEL 520



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L L  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 226 LKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 285

Query: 106 IPDEIG------------------------SATALVKF-------------DCSSNQLKE 128
           +P  +G                            ++K+             D        
Sbjct: 286 LPYSLGKLHLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKIKDDGPRQSDSVIETAMT 345

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   +I 
Sbjct: 346 LPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRIIE 405

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++    N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 406 LKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNR 465

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++S L T+ + +NQ+     E  ++   L  LDL NN L  +PPE+G    
Sbjct: 466 FKILPEVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNCVN 525

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 526 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 560



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 196/489 (40%), Gaps = 115/489 (23%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L +++N +  +   
Sbjct: 92  LNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPAS 151

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 152 FSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLELLYLRR 211

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 212 NKLRFLPEFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 271

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L     +  L +EGN +  +   +I   T  + + + SK   
Sbjct: 272 SLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKIKD 330

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G      + ET  +L    R+++H    L I           P  +        +    
Sbjct: 331 DGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSIN 390

Query: 237 MGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++ + ++L  N+L    +E C L +LS LDL NN L+ LP E+
Sbjct: 391 FSKNQLCEIPKRIIELKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEM 450

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +            ST +  LI+    
Sbjct: 451 ESLIRLQTINLSFNRFKIL---------PEVLYRI------------STLETILISNNQV 489

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
            SV  ++L +                 +  LDL  N + ++PPEL +C +L+TL+L  N 
Sbjct: 490 GSVNPEKLKI--------------MENLVTLDLQNNDLLQIPPELGNCVNLRTLLLDGNP 535

Query: 415 IKDWPDAIL 423
            +    AIL
Sbjct: 536 FRVPRAAIL 544



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 4/118 (3%)

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +LQ+L +   
Sbjct: 41  TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AIRELENLQKLNVSHN 97

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +L+  P +I  L+ L+ L L  N L SIPEGF+ L +L +LD+S+N ++ +P    S+
Sbjct: 98  KLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPASFSSL 155


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 169/515 (32%), Positives = 259/515 (50%), Gaps = 64/515 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L+ N +  +  ++  L  L  L++ +N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 77  LTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSV 136

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +     NQL  +P+ +GR  +L +    +N +TS+P ++   + + KL+
Sbjct: 137 PAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLN 196

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +    I   T L EL  + N L  +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 197 LNGNQLTSVPAE-IGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEI 255

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL + Y+G N L+++PAE+G+L+ L  L+L  NQL     E  QL  L VL L +N
Sbjct: 256 GQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDN 315

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P EIG++T+L +L L+GN L ++ + +              RL E          
Sbjct: 316 QLTSVPAEIGQLTSLTELYLSGNQLTSVPAEI-------------GRLTE---------- 352

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         KEL L    L+++P EIW+   +  L L  N + ELP E+    SL
Sbjct: 353 -------------LKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSL 399

Query: 406 QTLILSRNKIKDWPDAI--LTS--------------------LSSLSCLKLDNNPLRQVP 443
           + L L RN++   P  I  LTS                    L+SL+ L L    L  VP
Sbjct: 400 EELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVP 459

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           ++    +  L++L L  N + SLP       L  L+ELYL   QL   P +I +L +L+ 
Sbjct: 460 AE-IGQLTSLRVLYLYGNQLTSLP--AEIGQLASLRELYLNGKQLTSVPAEIGQLTELKE 516

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           LDL  N L S+PE    LTSL  L L DN ++++P
Sbjct: 517 LDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVP 551



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 228/475 (48%), Gaps = 64/475 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  ++  L  L  LN+  N+L+ +PA IG+L  L+ L+++ N +  +
Sbjct: 146 LERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSV 205

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L + D + NQL  +P+ +G+  +L +    +N +TS+P ++   + + KL 
Sbjct: 206 PAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLY 265

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V GN+LT +    I   T L  L    N L  +P  I  L+ L  L L  N++ S+P+ I
Sbjct: 266 VGGNQLTSVPAE-IGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEI 324

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL E Y+  N L+++PAE+G+L++L  L L  NQL     E  QL  L VL L +N
Sbjct: 325 GQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDN 384

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP EIG++T+L +L L  N L ++         PA +  L S              
Sbjct: 385 LLDELPAEIGQLTSLEELGLERNELTSV---------PAEIWQLTSL------------- 422

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                          EL L    L+++P+EI +   +TKL LS   +  +P E+    SL
Sbjct: 423 --------------TELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSL 468

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           + L L  N++   P A +  L+SL  L L+   L  VP++                    
Sbjct: 469 RVLYLYGNQLTSLP-AEIGQLASLRELYLNGKQLTSVPAE-------------------- 507

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
                   L  L+EL LR  +L   P +I +L  LR+L L  N L S+P   + L
Sbjct: 508 -----IGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIREL 557



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 210/411 (51%), Gaps = 30/411 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +  L  VP E+              +   L+KL L  N +  +  ++  L  L  L
Sbjct: 172 LNLKSNQLTSVPAEI-------------GQLASLEKLNLNGNQLTSVPAEIGQLTSLKEL 218

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ +PA IG+L  LK L +  N +  +P EIG   +L K     NQL  +P+ +
Sbjct: 219 DLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEI 278

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L   +  +N +TS+P ++   + +  L ++ N+LT +    I   T LTEL  S 
Sbjct: 279 GQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAE-IGQLTSLTELYLSG 337

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L  N++ S+P  I    SL   Y+ +N L  LPAE+G+L+
Sbjct: 338 NQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLT 397

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L     E  QL  L+ L L  N L+ +P EIG++T+L KL L+G  L +
Sbjct: 398 SLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTS 457

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           +         PA +  L S R+     ++ ++   ++  +A+      +EL L G  L++
Sbjct: 458 V---------PAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASL-----RELYLNGKQLTS 503

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +P+EI +  E+ +LDL  N +  +P E+    SL+ L L  N++   P AI
Sbjct: 504 VPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAI 554



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 178/360 (49%), Gaps = 42/360 (11%)

Query: 207 SRLIRLDL--HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            R++RL+L    N + S+P+ I    SL    + NN L+++PAE+G+L+ L  L L  NQ
Sbjct: 4   GRVVRLELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQ 63

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L     E  QL  L+ LDLS N L+ +P E+G++T+LR+L L  N L ++         P
Sbjct: 64  LTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSV---------P 114

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           A +  L S      D    T+    I   T L    + L L G  L+++P+EI     + 
Sbjct: 115 AEIGQLTSLEELCLDDNRLTSVPAEIGQLTSL----ERLYLGGNQLTSVPAEIGRLTSLE 170

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +L+L  N +  +P E+   ASL+ L L+ N++   P A +  L+SL  L L+ N L  VP
Sbjct: 171 ELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVP-AEIGQLTSLKELDLNGNQLTSVP 229

Query: 444 SD----------GFKD---------IPMLQILDLSY----NIASLPENPPFSSLPHLQEL 480
           +D          G +D         I  L  L+  Y     + S+P       L  L+ L
Sbjct: 230 ADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVP--AEIGQLTSLEGL 287

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L   QL   P +I +L  LR+L L  N L S+P     LTSLTEL LS N ++++P E+
Sbjct: 288 ELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEI 347



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 37/276 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L +  L  VP E+             W+   L+ L L  N +  +  ++  L  LT 
Sbjct: 286 GLELDDNQLTSVPAEI-------------WQLTSLRVLYLDDNQLTSVPAEIGQLTSLTE 332

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+L+ +PA IG L  LK L +  N +  +P+EI   T+L       N L ELP+ 
Sbjct: 333 LYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAE 392

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L +     N +TS+P ++   + +++L +  N+LT +    I   T LT+L  S
Sbjct: 393 IGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAE-IGQLTSLTKLYLS 451

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-------------- 238
              L  +P  IG L+ L  L L+ N++ S+P+ I    SL E Y+               
Sbjct: 452 GTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQL 511

Query: 239 ---------NNALSALPAELGKLSKLGTLDLHSNQL 265
                    +N L+++P E+ +L+ L  L L  NQL
Sbjct: 512 TELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQL 547


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/528 (32%), Positives = 283/528 (53%), Gaps = 41/528 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L    N+I K+ E +  L  L  L+VS NK++E+P AI +L  L+ L VS N I +
Sbjct: 127 NLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITE 186

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I + + L +   SSNQ+ E+P ++ + +NL + + S+N IT +PE +A  + + KL
Sbjct: 187 IPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKL 246

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++T +   +IA  T LT+L  S N +  + E +  L  L ++ LH N+I  IP +
Sbjct: 247 YLRNNQITEIP-EVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDA 305

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L +  +  N ++ +P  L KL+ L  L L+SNQ+ E      +L  L+ LDLS 
Sbjct: 306 LAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSY 365

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALLKYLR-SRLPENEDSEA 341
           N ++ +P  + K+T L +L+L  N +  +  +L      T  +L Y R S +PE      
Sbjct: 366 NQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLT 425

Query: 342 STTKEDL----IT-----MATRLSVTS---------------------KELSLEGMNLSA 371
           + T+ DL    IT     +A  +++T                      ++L L    ++ 
Sbjct: 426 NLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITE 485

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           IP  + +   +T+L+LS N I ++P  L+  ++L  L L+RNKI + P+A L  L++L+ 
Sbjct: 486 IPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEA-LAKLTNLTQ 544

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDL--SYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
           L L NN + ++P +    +  L  LDL  +YNI+ +PE    + L +L +L L   Q+ E
Sbjct: 545 LYLRNNRITEIP-EALAKLTNLTQLDLGTNYNISEIPE--AITKLTNLTQLNLTSSQITE 601

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            P  I +L  L  L+L+ N +  IPE    LT+LT+L L+ N I+ +P
Sbjct: 602 IPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIP 649



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 267/498 (53%), Gaps = 19/498 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L++N I K+ E L  L  LT + + +NK++E+P A+ +L  L  LD+S+N I K
Sbjct: 265 NLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITK 324

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ +   T L +    SNQ+ E+P  + +  NL+    S N IT +PE LA  + +++L
Sbjct: 325 IPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQL 384

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+++ +   L A    LT++I S N ++ +PE +  L+ L +LDL  N+I  IP +
Sbjct: 385 ILYSNRISEIPEAL-AKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEA 443

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L +  + +N ++ +P  L KL+ L  L L  N++ E      +L  L+ L+LS+
Sbjct: 444 LAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSD 503

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
           N +  +P  + K++ L +L L  N +  +  +L        L YLR+ R+ E  ++ A  
Sbjct: 504 NQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQL-YLRNNRITEIPEALAKL 562

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           T    + + T              N+S IP  I +   +T+L+L+ + I E+P  ++   
Sbjct: 563 TNLTQLDLGT------------NYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLT 610

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           +L  L L+ N+I + P+AI   L++L+ L L +N + ++P    K   + Q+   S  I 
Sbjct: 611 NLTQLNLTSNQIAEIPEAI-AKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQIT 669

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +PE    + L +L +L L   Q+ E P  I +L  L  L L+ N +  IP+    LT+L
Sbjct: 670 KIPE--AIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLTNL 727

Query: 524 TELDLSDNNISALPPELV 541
           T+LDLS N IS +P E++
Sbjct: 728 TQLDLSYNRISEIPLEIL 745



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 253/499 (50%), Gaps = 41/499 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL ++ N +E + + +  +  L  L +   +L+E+P AI  L  L  L  + N I K
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISK 140

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I   + L +   SSN++ E+P ++ +  NL +   S+N IT +PE +A+ S + +L
Sbjct: 141 IPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLREL 200

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  N++T +    IA    L EL  S N +  +PE I  L+ L +L L  N+I  IP  
Sbjct: 201 HVSSNQITEIP-EAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEV 259

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L +  +  N ++ +   L KL  L  + LH+N++ E      +L  L+ LDLS 
Sbjct: 260 IAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSY 319

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P  + K+T L +L+L  N +                    + +PE         
Sbjct: 320 NQITKIPEALAKLTNLTQLILYSNQI--------------------TEIPE--------- 350

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              +I   T L+    +L L    ++ IP  + +   +T+L L  N I E+P  L+   +
Sbjct: 351 ---VIAKLTNLT----QLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLIN 403

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  +ILS N+I + P+A L  L++L+ L L  N + ++P    K I + QI+  S  I  
Sbjct: 404 LTQIILSYNRISEIPEA-LAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITE 462

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +PE    + L +L++LYL   ++ E P  + +L  L  L+LS N +  IP+    L++LT
Sbjct: 463 IPE--ALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLT 520

Query: 525 ELDLSDNNISALPPELVSV 543
           +LDL+ N I+ +P  L  +
Sbjct: 521 QLDLNRNKITEIPEALAKL 539



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 210/401 (52%), Gaps = 20/401 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +LIL  N I ++ E L  L  LT + +S+N++SE+P A+ +L  L  LD+S+N I K
Sbjct: 380 NLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITK 439

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ +     L +    SN++ E+P +L +  NL     S N IT +PE LA  + +++L
Sbjct: 440 IPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQL 499

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N++  +   L A  + LT+L  ++N +  +PE +  L+ L +L L  NRI  IP +
Sbjct: 500 NLSDNQIIKIPKAL-AKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEA 558

Query: 226 ISGCCSLAEFYMGNNA-LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           ++   +L +  +G N  +S +P  + KL+ L  L+L S+Q+ E      +L  L+ L+L+
Sbjct: 559 LAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLT 618

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N ++ +P  I K+T L +L+LT N +  +         P  +  L +    N  S   T
Sbjct: 619 SNQIAEIPEAIAKLTNLTQLILTSNQITEI---------PEAIAKLTNLTQLNLTSNQIT 669

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              + I   T L+    +L L    ++ IP  I +   +T+L L+ N I E+P  ++   
Sbjct: 670 KIPEAIAKLTNLT----QLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLT 725

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           +L  L LS N+I + P  IL S      L    N LRQ+ +
Sbjct: 726 NLTQLDLSYNRISEIPLEILDSKDPKEIL----NYLRQIST 762



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   +L+ Y     ++   V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKKLEGYERVGSRILEKV---SGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +  LRKL ++GNPL ++   +        L  +R  L E  ++ A+      ++  T
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIAN------LSNLT 129

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           +L   S        ++S IP  I +   + +L +S N I E+P  ++  ++L+ L +S N
Sbjct: 130 QLYFNSN-------HISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSN 182

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           +I + P+AI  +LS+L  L + +N + ++P    K I + ++   S  I  +PE    + 
Sbjct: 183 QITEIPEAI-ANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPE--VIAK 239

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +L++LYLR  Q+ E P  I +L  L  LDLS N +  I E    L +LT++ L +N I
Sbjct: 240 LTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKI 299

Query: 534 SALPPELVSV 543
           + +P  L  +
Sbjct: 300 TEIPDALAKL 309



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 47/237 (19%)

Query: 344 TKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEIT------------------- 383
           T+++L+ +  R      +EL L G  L+ +P EI +  ++                    
Sbjct: 2   TQDELLELIDRAVAEGWRELDLSGQELTELPGEIGKLQQLESLILGKKLEGYERVGSRIL 61

Query: 384 ----------------------KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
                                 KLD+S N ++ +P  ++    L+ LIL R ++ + P+A
Sbjct: 62  EKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEA 121

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I  +LS+L+ L  ++N + ++P +    +  L+ L +S N I  +PE    + L +L+EL
Sbjct: 122 I-ANLSNLTQLYFNSNHISKIP-ELIAKLSNLRELHVSSNKITEIPE--AIAKLSNLREL 177

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           ++   Q+ E P  I  L  LR L +S N +  IPE    L +L EL +S N I+ +P
Sbjct: 178 HVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIP 234


>gi|149026333|gb|EDL82576.1| similar to hypothetical protein FLJ20331, isoform CRA_b [Rattus
           norvegicus]
          Length = 602

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 290/560 (51%), Gaps = 52/560 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKMLPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P       +L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+  N +  L AE L  L  +  LDL SN+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLS------VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +         VT K L       + IP +I++A +   +T ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRI--- 444

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
           A L+ ++L  N           S + LS +           S     +  L  LDL  N 
Sbjct: 445 AELKEMVLDVN----------LSFNKLSLV-----------SHELCLLQKLAFLDLRNNF 483

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNL 520
           ++SLPE    SSL  LQ + L   + +  P  +  +  L  + +S N + S+ P   K +
Sbjct: 484 LSSLPEE--MSSLTKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLM 541

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L+ LDL +N++  +PPEL
Sbjct: 542 ENLSTLDLQNNDLLQIPPEL 561



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +   + L     S+   T +P+D+ D +K   ++ ++   N+L  +   +  
Sbjct: 387 LPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 447 LKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL----SVLDLSNNSLSGLPPEIGKM 297
               PA L  +S L T+ + +NQ+    V+  +++L    S LDL NN L  +PPE+G  
Sbjct: 507 FKVFPAVLYHISTLETILISNNQVG--SVDPLKMKLMENLSTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 171/393 (43%), Gaps = 61/393 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  E +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D  SN+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  I        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSLVSHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           PA+L ++ 
Sbjct: 468 LCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PAVLYHI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                      ST +  LI+     SV   ++ L                 ++ LDL  N
Sbjct: 518 -----------STLETILISNNQVGSVDPLKMKL--------------MENLSTLDLQNN 552

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 553 DLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 585


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 172/531 (32%), Positives = 278/531 (52%), Gaps = 43/531 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           DVP E  +N   +   ++WWE  DL KLIL+ N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 90  DVPEEANQNLSFSA-AERWWEQTDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLTS 148

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 149 LPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDL 208

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 209 DISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVE-ISGMKRLKHLDCNSNLLETVPPE 267

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + ++  L  L L +N++  +P     C  L E ++G N +  L P  L  L+ +  LDL 
Sbjct: 268 LANMESLELLYLRRNKLRFLP-EFPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLR 326

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L+    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++N 
Sbjct: 327 DNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-PLKFLALEGNPLRTIRREIINK 385

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++  +++ +  E  +T+   +R++V    T K L       + IP 
Sbjct: 386 GTQEVLKYLRSKIKDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPD 445

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLS 430
           E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L  L+
Sbjct: 446 EVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLS-FISLELCMLQKLT 504

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L  +P +  + +  LQ ++LS+N         F  LP +         L   
Sbjct: 505 FLDLRNNFLNSLPEE-MESLIRLQTINLSFN--------RFKILPDV---------LYHI 546

Query: 491 PTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
           PT       L  + +S N + S+ P+  K + +L  LDL +N++  +PPEL
Sbjct: 547 PT-------LETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPEL 590



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 153/337 (45%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 296 LKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDISS 355

Query: 106 IPDEIG------------------------SATALVKF------DCSSNQ-------LKE 128
           +P  +G                            ++K+      D   NQ          
Sbjct: 356 LPCSLGKLPLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPNQSDSVVETAMT 415

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 416 LPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVE 475

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 476 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNR 535

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
              LP  L  +  L T+ + +NQ+    V+  +++    L  LDL NN L  +PPE+G  
Sbjct: 536 FKILPDVLYHIPTLETILISNNQVG--SVDPQKMKAMENLITLDLQNNDLLQIPPELGNC 593

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 594 VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 630



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 184/434 (42%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 231 LNISSNQLKSLPVEI--------SGMKRLKHLDCNS-----NLLETVPPELANMESLELL 277

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I  + P+ +    +++  D   N+L+ +P  
Sbjct: 278 YLRRNKLRFLPE-FPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDE 336

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 337 ITLLQSLERLDLSNNDISSLPCSLGKLP-LKFLALEGNPLRTIRREIINKGTQEVLKYLR 395

Query: 192 SK------NLLNGMPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
           SK      N  + + ET  +L    R+++H    L I           P  +        
Sbjct: 396 SKIKDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNI 455

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 456 ITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 515

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 516 LPEEMESLIRLQTINLSFNRFKILPDVLYHIPT--------------------------- 548

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T L   ++  S++   + A+ + I        LDL  N + ++PPEL +C +L+TL+
Sbjct: 549 -LETILISNNQVGSVDPQKMKAMENLI-------TLDLQNNDLLQIPPELGNCVNLRTLL 600

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 601 LDGNPFRVPRAAIL 614



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 6/191 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R++V   E + + ++ SA     WE  ++TKL LS N +Q L  +L    +L  L +  N
Sbjct: 86  RINVDVPEEANQNLSFSA-AERWWEQTDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDN 144

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P AI   L +L  L + +N L+ +P +   ++  L+ L L +N +  +PE   F 
Sbjct: 145 QLTSLPSAI-RELENLQKLNVSHNKLQILPEE-ITNLRNLKGLYLQHNELTRIPEG--FE 200

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L +L++L +   +L   P     L  L  L++S N L+S+P     +  L  LD + N 
Sbjct: 201 QLFNLEDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNL 260

Query: 533 ISALPPELVSV 543
           +  +PPEL ++
Sbjct: 261 LETVPPELANM 271


>gi|198426338|ref|XP_002124802.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 598

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 182/562 (32%), Positives = 281/562 (50%), Gaps = 55/562 (9%)

Query: 2   DRILKAARTSGSLNLSNR----------SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLI 51
           D  L  AR SG+LNLSN           SL   P +   +FD+      WW+ V+L KL 
Sbjct: 27  DAKLNQARKSGTLNLSNNQWDVLPSNVWSLNKAPTKEAASFDDGNSA--WWDQVELTKLN 84

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  L EDL++   L  L+V  NKL  LP AIG L  L+ L++S N +  I     
Sbjct: 85  LSSNLLCSLPEDLQSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLSIIQTSFN 144

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       N+L+ELPSSLGR  N      S+N IT+LPED+     +   +   N+
Sbjct: 145 GLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKDFNASFNQ 204

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L NN I     L  L AS N +  +P++I +L +L  L    N +  +P S++ C  
Sbjct: 205 LNALPNN-IGKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNLLDQLP-SLTSCVC 262

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +GNN L+  P++L     +  L+L  N+L E  +   +L +L   D++NN++  L
Sbjct: 263 LKELSLGNNRLTCFPSQLP--VSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVPNL 320

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PPE+G M +++ ++++GNP+RT+ S ++N  T ALLK+LRSR+  NE    + +   +I 
Sbjct: 321 PPEVGAMESIKVVVVSGNPIRTISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIP 380

Query: 351 MAT--------RLSVTSKELSLEGMNLSAIPSEIWEAGE--ITKLDLSRNSIQELPPELS 400
            +          L  +S++L L   N  ++ +++    E  + ++ L+R S+  +P ELS
Sbjct: 381 QSNSNNDLSNKHLVASSRKLDLTKENPESVTTKLALYSELPVNEVILARCSLTNIPEELS 440

Query: 401 SC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               SL TL +S NK+K  P  I    S L  L L  N +  +P D   +   L+ +++S
Sbjct: 441 GYKGSLSTLNMSNNKLKCLPPMI-GCFSQLGHLDLSGNAMSALP-DELGECISLREINMS 498

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFK 518
           YN+        F+ L                P  I +L+ L +L    N +  I     K
Sbjct: 499 YNL--------FTVL----------------PGSIFKLKNLEVLVADNNQMTKIDVPNLK 534

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L  L+ L L +N+I+ +PPEL
Sbjct: 535 LLQQLSTLSLQNNSINEVPPEL 556



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 149/320 (46%), Gaps = 35/320 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V +  L L  N + ++   +  L  L   ++++N +  LP  +G +  +K + VS N I 
Sbjct: 282 VSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAMESIKVVVVSGNPIR 341

Query: 105 KIPDEI--GSATALVKFDCS---SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            I   I      AL+K   S   SN+ + L +S G  +  S+   SNN +++  + L   
Sbjct: 342 TISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIPQSN---SNNDLSN--KHLVAS 396

Query: 160 SKMSKLDVEG-----NKLTVLS----NNLIASWTMLTE--------------LIASKNLL 196
           S+   L  E       KL + S    N +I +   LT               L  S N L
Sbjct: 397 SRKLDLTKENPESVTTKLALYSELPVNEVILARCSLTNIPEELSGYKGSLSTLNMSNNKL 456

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  IG  S+L  LDL  N + ++P  +  C SL E  M  N  + LP  + KL  L 
Sbjct: 457 KCLPPMIGCFSQLGHLDLSGNAMSALPDELGECISLREINMSYNLFTVLPGSIFKLKNLE 516

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLS--NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L   +NQ+ +  V   +L   +  LS  NNS++ +PPE+G  T++  L L GN  R  R
Sbjct: 517 VLVADNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFTSITALKLEGNLFRVPR 576

Query: 315 SSLVNGPTPALLKYLRSRLP 334
            +++   T AL++YLRSRLP
Sbjct: 577 QNVLQKGTLALMEYLRSRLP 596



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
           W D +      L+ L L +N L  +P D  +    L+ LD+  N + +LP      +L  
Sbjct: 74  WWDQV-----ELTKLNLSSNLLCSLPED-LQSFEFLKFLDVHDNKLQALPN--AIGNLSA 125

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ L L   QL    T    L  LR+L L  N L+ +P     L +  +LD+S N I+ L
Sbjct: 126 LEHLNLSHNQLSIIQTSFNGLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTL 185

Query: 537 PPELVSV 543
           P ++  +
Sbjct: 186 PEDICGI 192


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 173/531 (32%), Positives = 281/531 (52%), Gaps = 43/531 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 262 DIPEEANQNLSFSA-AERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 320

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  LP    +  +L D 
Sbjct: 321 LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDL 380

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 381 DLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSLPAE-ISGMKRLKHLDCNSNLLETIPPE 439

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S+  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 440 LASMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLR 498

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++N 
Sbjct: 499 DNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPLRTIRREIINK 557

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSVTS----KELSLEGMNLSAIPS 374
            T  +LKYL+S++ ++E S+ ++  E  +T+   +R++V S    K L         IP 
Sbjct: 558 GTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAVLIPD 617

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLS 430
           E+++A +   +T ++ S+N + E+P  +     + + + LS NK+  +    L +L  L+
Sbjct: 618 EVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKL-SFVSLELCTLQKLT 676

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY         
Sbjct: 677 FLDLRNNFLNSLPEE-MESLIRLQTINLSFN--------RFKILPEV--LY--------- 716

Query: 491 PTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
                R+  L  + +S N + S+ P+  K + +L  LDL +N++  +PPEL
Sbjct: 717 -----RIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPEL 762



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 29/311 (9%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  E
Sbjct: 495 LDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKLH-LKFLALEGNPLRTIRRE 553

Query: 110 I---GSATAL------VKFD--CSSNQLKE----LPS----SLGRCLNLSDFKASNNCIT 150
           I   G+   L      +K D    +N + E    LPS    ++   + L     S+    
Sbjct: 554 IINKGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAV 613

Query: 151 SLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +P+++ D  K   ++ ++   N+L  +   +I    M++++  S N L+ +   + +L 
Sbjct: 614 LIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFVSLELCTLQ 673

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+  
Sbjct: 674 KLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVG- 732

Query: 268 YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
             V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T 
Sbjct: 733 -SVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTA 791

Query: 324 ALLKYLRSRLP 334
           A+L+YLR R+P
Sbjct: 792 AILEYLRDRIP 802



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 136/312 (43%), Gaps = 41/312 (13%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + NN L +L  +L  L  L  LD+H NQL        +L  L  L++S+N L  L
Sbjct: 285 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 344

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EI  +  L+ L L  N L  L         P   + L S     ED + S  +  ++ 
Sbjct: 345 PEEITNLRNLKGLYLQHNELTCL---------PEGFEQLFSL----EDLDLSNNRLTIVP 391

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            +     +   L+L    L ++P+EI     +  LD + N ++ +PPEL+S  SL+ L L
Sbjct: 392 ASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYL 451

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 470
            RNK++  P+    S   L  L +  N +  + ++  K +  + +LDL  N         
Sbjct: 452 RRNKLRFLPE--FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDN--------- 500

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
                          +L+  P +I  LQ L  LDLS N + S+P     L  L  L L  
Sbjct: 501 ---------------KLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEG 544

Query: 531 NNISALPPELVS 542
           N +  +  E+++
Sbjct: 545 NPLRTIRREIIN 556



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 183/434 (42%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L ++  L +L
Sbjct: 403 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NLLETIPPELASMESLELL 449

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +    +++  D   N+LK +P  
Sbjct: 450 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDE 508

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 509 ITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQ 567

Query: 192 SK------NLLNGMPETIGSLSRLIRLDLH-----------QNRILSIPSSISGCCS--- 231
           SK      +  N + ET  +L    R+++H             + + IP  +        
Sbjct: 568 SKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAVLIPDEVFDAVKSNI 627

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 628 VTSVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFVSLELCTLQKLTFLDLRNNFLNS 687

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L   PT   +    +++  + D +   T E+LI
Sbjct: 688 LPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQV-GSVDPQKMKTMENLI 746

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           T                                  LDL  N + ++PPEL +C +L+TL+
Sbjct: 747 T----------------------------------LDLQNNDLLQIPPELGNCVNLRTLL 772

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 773 LDGNPFRVPRAAIL 786



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 6/191 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R++V   E + + ++ SA     WE  ++TKL +S N +Q L  +L    +L  L +  N
Sbjct: 258 RINVDIPEEANQNLSFSAA-ERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDN 316

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P AI   L +L  L + +N L+ +P +   ++  L+ L L +N +  LPE   F 
Sbjct: 317 QLTSLPSAI-RELENLQKLNVSHNKLKILPEE-ITNLRNLKGLYLQHNELTCLPEG--FE 372

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L++L L   +L   P     L  L  L+LS N L+S+P     +  L  LD + N 
Sbjct: 373 QLFSLEDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNL 432

Query: 533 ISALPPELVSV 543
           +  +PPEL S+
Sbjct: 433 LETIPPELASM 443


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 267/530 (50%), Gaps = 41/530 (7%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N       ++WWE +DL KLI+++N ++ L +DLR LP LT+L++  N L+ 
Sbjct: 97  DLPEEAKQNHS-FNASERWWEQIDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTS 155

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP AIGEL  L+ L+VS N +  +P E+     L       N+L  +P   G+   L D 
Sbjct: 156 LPCAIGELENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDL 215

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T+LP   +  S + +L++  N++  L    I     L  L  + N L  +P  
Sbjct: 216 DLSNNHLTALPVSFSSLSNLMRLNLASNQMKDLPVE-ITRMKRLKHLDCTSNYLQTVPSE 274

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + S+  L  L L +N++  +P     C  L E ++G N +  L P  L  L  +  LDL 
Sbjct: 275 LASMESLELLYLRRNKLRFLP-EFPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLR 333

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDL+NN +S LP  +G +  L+ L L GNPLRT+R  L+N 
Sbjct: 334 DNKLKSIPDEITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNK 393

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------KELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++  ++   + E  +T+ ++  V +      K L       + IP 
Sbjct: 394 GTQEVLKYLRSKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPD 453

Query: 375 EIWEA---GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           EI++A     IT ++ S+N + E+P  +    ++  + L  NK+     A L  L +L+ 
Sbjct: 454 EIFDAVGNNVITSVNFSKNHLNEIPKRIMELKAVCDINLGFNKL-SCVSAELGVLQNLAH 512

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L + NN L  +P +  + +  LQ ++LS+N                        + +  P
Sbjct: 513 LDIRNNLLTSLPEE-MEALIKLQTINLSFN------------------------RFKTFP 547

Query: 492 TDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
           + + R++ L  + LS N + S+ P   K +  L  LDL +N++  +PPEL
Sbjct: 548 SVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPEL 597



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 63/343 (18%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E LR+L  + VL++  NKL  +P  I  L  L+ LD++ N I  
Sbjct: 303 LKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEITLLQALERLDLTNNDISS 362

Query: 106 IPDEIGSATALVKFDCSSNQLKEL----------------------------PSSLGRCL 137
           +P  +G+   L       N L+ +                             +S+   +
Sbjct: 363 LPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDPVNQNEASIETAM 422

Query: 138 NL-SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            L S  + + + IT+L   L D S      +       + NN+I S         SKN L
Sbjct: 423 TLPSQARVNAHTITAL--KLLDYSDKQTTLIPDEIFDAVGNNVITSVNF------SKNHL 474

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           N +P+ I  L  +  ++L  N++  + + +    +LA   + NN L++LP E+  L KL 
Sbjct: 475 NEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQ 534

Query: 257 TLDLHSNQLKEY---------------------CVEACQLR----LSVLDLSNNSLSGLP 291
           T++L  N+ K +                      V+  QL+    L+ LDL NN L  +P
Sbjct: 535 TINLSFNRFKTFPSVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIP 594

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           PE+G   +LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 595 PELGNCVSLRALLLEGNPFRIPRAAILAKGTEAVLEYLRDRIP 637



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 191/450 (42%), Gaps = 57/450 (12%)

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           ++L+    SNN + SL +DL     ++ LD+  N LT L    I     L +L  S N L
Sbjct: 118 IDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTSLPC-AIGELENLQKLNVSHNKL 176

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ +  L  L  L L  N +  +P        L +  + NN L+ALP     LS L 
Sbjct: 177 KTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALPVSFSSLSNLM 236

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L+L SNQ+K+  VE  ++ RL  LD ++N L  +P E+  M +L  L L  N LR L  
Sbjct: 237 RLNLASNQMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYLRRNKLRFLPE 296

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                P+  LLK L   + EN+        E L     R   +   L L    L +IP E
Sbjct: 297 F----PSCLLLKELH--VGENQ-------IEMLGPEHLRHLKSIHVLDLRDNKLKSIPDE 343

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS--LSCL- 432
           I     + +LDL+ N I  LP  L +   LQ L L  N ++     +L   +   L  L 
Sbjct: 344 ITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLR 403

Query: 433 -KLDNNPLRQ----------VPSDG---FKDIPMLQILDLSYNIASLPENPPFSSLP--- 475
            K+ ++P+ Q          +PS        I  L++LD S    +L  +  F ++    
Sbjct: 404 SKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPDEIFDAVGNNV 463

Query: 476 ---------HLQELYLRRMQLREA-------------PTDILRLQQLRILDLSQNSLQSI 513
                    HL E+  R M+L+                 ++  LQ L  LD+  N L S+
Sbjct: 464 ITSVNFSKNHLNEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSL 523

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           PE  + L  L  ++LS N     P  L  V
Sbjct: 524 PEEMEALIKLQTINLSFNRFKTFPSVLYRV 553



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 72/434 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL++  ++D+P E+ +                L+ L    N ++ +  +L ++  L +L
Sbjct: 238 LNLASNQMKDLPVEITR-------------MKRLKHLDCTSNYLQTVPSELASMESLELL 284

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP     L +LK L V  N I M  P+ +    ++   D   N+LK +P  
Sbjct: 285 YLRRNKLRFLPEFPSCL-LLKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDE 343

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +     L     +NN I+SLP  L +  ++  L +EGN L  +   L+   T  + + + 
Sbjct: 344 ITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLR 403

Query: 192 SK------NLLNGMPETIGSLSRLIRLDLHQNRILS-----------IPSSI---SGCCS 231
           SK      N      ET  +L    R++ H    L            IP  I    G   
Sbjct: 404 SKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPDEIFDAVGNNV 463

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           +       N L+ +P  + +L  +  ++L  N+L     E   L+ L+ LD+ NN L+ L
Sbjct: 464 ITSVNFSKNHLNEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSL 523

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P E+  +  L+ + L+ N  +T          P++L  +RS                   
Sbjct: 524 PEEMEALIKLQTINLSFNRFKTF---------PSVLYRVRS------------------- 555

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           + T L   ++  S++       P ++ +  ++  LDL  N +  +PPEL +C SL+ L+L
Sbjct: 556 LETILLSNNQVGSVD-------PLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRALLL 608

Query: 411 SRNKIKDWPDAILT 424
             N  +    AIL 
Sbjct: 609 EGNPFRIPRAAILA 622



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 145/350 (41%), Gaps = 44/350 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P+T+  ++  +  +  QN   +          L +  + NN L +L  +L  L  L
Sbjct: 84  LSEVPQTVWRINLDLPEEAKQNHSFNASERWWEQIDLTKLIISNNKLQSLSDDLRLLPAL 143

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+H N L        +L  L  L++S+N L  LP E+ K+  L+ L L  N L  + 
Sbjct: 144 TILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCVP 203

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAI 372
                            +L + ED + S     L  +    S  S    L+L    +  +
Sbjct: 204 EGF-------------GQLHKLEDLDLSNNH--LTALPVSFSSLSNLMRLNLASNQMKDL 248

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI     +  LD + N +Q +P EL+S  SL+ L L RNK++  P+    S   L  L
Sbjct: 249 PVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYLRRNKLRFLPE--FPSCLLLKEL 306

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            +  N +  +  +  + +  + +LDL  N                        +L+  P 
Sbjct: 307 HVGENQIEMLGPEHLRHLKSIHVLDLRDN------------------------KLKSIPD 342

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +I  LQ L  LDL+ N + S+P    NL  L  L L  N +  +  EL++
Sbjct: 343 EITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLN 392


>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
          Length = 574

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 44/531 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 34  DIPEEANQNLSFSA-TERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 92

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 93  LPSAIRELENLQRLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDL 152

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 153 DLSNNRLTTIPASFS-LSSLVRLNLSSNQLKSLPAE-ISGMKRLKHLDCNSNLLETIPPE 210

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           +  +  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 211 LAGMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLR 269

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  ++N 
Sbjct: 270 DNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPIRTIRREIINK 328

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ +N  +++ +  E  +T+ +   V      T K L       + IP 
Sbjct: 329 GTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLIPD 388

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLS 430
           E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L  L+
Sbjct: 389 EVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKL-SFISVELCVLQKLT 447

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L  +P +  + +  LQ ++LS+N         F  LP +         L   
Sbjct: 448 FLDLRNNFLSSLPKE-MESLIRLQTINLSFN--------RFRILPEV---------LYHI 489

Query: 491 PTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
           PT       L  + +S N + S+ PE  K + +L  LDL +N++  +PPEL
Sbjct: 490 PT-------LETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPEL 533



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 190/450 (42%), Gaps = 60/450 (13%)

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L+    SNN + SL +DL     ++ LD+  N+LT L +  I     L  L  S N L 
Sbjct: 56  DLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPS-AIRELENLQRLNVSHNKLK 114

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +L  L  L L  N +  IP       +L +  + NN L+ +PA    LS L  
Sbjct: 115 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIPASFS-LSSLVR 173

Query: 258 LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L SNQLK    E   + RL  LD ++N L  +PPE+  M +L  L L  N LR L   
Sbjct: 174 LNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPE- 232

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
               P+  LLK L       E+       E L  + + L      L L    L ++P EI
Sbjct: 233 ---FPSCKLLKELHV----GENQIEMLGAEHLKHLTSILV-----LDLRDNKLKSVPEEI 280

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS-----LSSLSC 431
                + +LDLS N I  LP  L     L+ L L  N I+     I+       L  L  
Sbjct: 281 TLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPIRTIRREIINKGTQEVLKYLRS 339

Query: 432 LKLDNNPLRQ---------VPSD---GFKDIPMLQILDLSYNIASLPENPPFSSLP---- 475
              DN P +          +PS+       I  L+ILD S    +L  +  F ++     
Sbjct: 340 KIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLIPDEVFDAVKSNII 399

Query: 476 --------HLQELYLRRMQLREAPTDI--------------LRLQQLRILDLSQNSLQSI 513
                    L E+  R ++L+E  +D+                LQ+L  LDL  N L S+
Sbjct: 400 TSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLSSL 459

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P+  ++L  L  ++LS N    LP  L  +
Sbjct: 460 PKEMESLIRLQTINLSFNRFRILPEVLYHI 489



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + E++  L  L  L++S+N +S LP ++G+LH LK L +  N I  I  EI 
Sbjct: 268 LRDNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPIRTIRREII 326

Query: 111 -GSATALVKF------DCSSNQ-------LKELPS----SLGRCLNLSDFKASNNCITSL 152
                 ++K+      D   NQ          LPS    ++     L     S+   T +
Sbjct: 327 NKGTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLI 386

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 387 PDEVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQKL 446

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 447 TFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPEVLYHIPTLETVLVSNNQVGSVD 506

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            E  +    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 507 PEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 566

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 567 YLRDRIP 573



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 182/439 (41%), Gaps = 84/439 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L  +  L +L
Sbjct: 174 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NLLETIPPELAGMESLELL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +   T+++  D   N+LK +P  
Sbjct: 221 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLRDNKLKSVPEE 279

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN +  +   +I   T  + + + 
Sbjct: 280 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPIRTIRREIINKGTQEVLKYLR 338

Query: 192 SKNLLNG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
           SK   NG      + ET  +L    R+++H    L I           P  +        
Sbjct: 339 SKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLIPDEVFDAVKSNI 398

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    VE C L +L+ LDL NN LS 
Sbjct: 399 ITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLSS 458

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +  L+ + L+ N  R L   L + PT      L + L  N      D E   T
Sbjct: 459 LPKEMESLIRLQTINLSFNRFRILPEVLYHIPT------LETVLVSNNQVGSVDPEKLKT 512

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 513 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 538

Query: 405 LQTLILSRNKIKDWPDAIL 423
           L+TL+L  N  +    AIL
Sbjct: 539 LRTLLLDGNPFRVPRAAIL 557



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 7/191 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R++V   E + + ++ SA     WE  ++TKL +S N +Q L  +L    +L  L +  N
Sbjct: 30  RINVDIPEEANQNLSFSAT-ERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDN 88

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P AI   L +L  L + +N L+ +P +   ++  L+ L L +N +  +PE   F 
Sbjct: 89  QLTSLPSAI-RELENLQRLNVSHNKLKILPEE-ITNLRNLKGLYLQHNELTCIPEG--FE 144

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L +L++L L   +L   P     L  L  L+LS N L+S+P     +  L  LD + N 
Sbjct: 145 QLFNLEDLDLSNNRLTTIPAS-FSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNL 203

Query: 533 ISALPPELVSV 543
           +  +PPEL  +
Sbjct: 204 LETIPPELAGM 214


>gi|354478360|ref|XP_003501383.1| PREDICTED: leucine-rich repeat-containing protein 40 [Cricetulus
           griseus]
 gi|344250474|gb|EGW06578.1| Leucine-rich repeat-containing protein 40 [Cricetulus griseus]
          Length = 602

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 285/554 (51%), Gaps = 40/554 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   E          ++WWE  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDVPEEANQNLSFSSTERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNRLNMLPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    R   L D   SNN + ++P   A  S + +L++  N+L 
Sbjct: 151 KNLKVLHLQHNELTGIPEGFERLSGLEDLDLSNNRLATVPAGFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P        L 
Sbjct: 211 SLPAE-ISRMQRLKHLDCDSNLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSSRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L +L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLGENQIETLGAEHLQQLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGNLH-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTL 387

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-- 409
            +   V          N+ AI +       +  LD S      +P ++   A   T+I  
Sbjct: 388 PSESRV----------NIHAIVT-------LKLLDYSDKQATLIPDDVFDAAKSNTIISV 430

Query: 410 -LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
             S+N++ + P  I+     +S + L  N L  + S  F  +  L  LDL  N + SLPE
Sbjct: 431 NFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFI-SQEFCLLQKLTFLDLRNNFLNSLPE 489

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTEL 526
               SSL  LQ + L   + +  P  +  +  L  + +S N + S+ P+  K + +L+ L
Sbjct: 490 E--MSSLTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVGSVDPQKVKLMENLSTL 547

Query: 527 DLSDNNISALPPEL 540
           DL +N++  +PPEL
Sbjct: 548 DLQNNDLLQVPPEL 561



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 25/309 (8%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N +  + E++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  E
Sbjct: 294 LDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLALEGNPLRTIRRE 352

Query: 110 I---GSATAL------VKFDCSSNQ------LKELPS----SLGRCLNLSDFKASNNCIT 150
           I   G+   L      +K D +S           LPS    ++   + L     S+   T
Sbjct: 353 IIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTLPSESRVNIHAIVTLKLLDYSDKQAT 412

Query: 151 SLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +P+D+ D +K   +  ++   N+L  +   +I    M++++  S N L+ + +    L 
Sbjct: 413 LIPDDVFDAAKSNTIISVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFISQEFCLLQ 472

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  LDL  N + S+P  +S    L    +  N    LPA L  +  L  + + +NQ+  
Sbjct: 473 KLTFLDLRNNFLNSLPEEMSSLTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVGS 532

Query: 268 YCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              +  +L   LS LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 533 VDPQKVKLMENLSTLDLQNNDLLQVPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAV 592

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 593 LEYLRDRIP 601


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 171/518 (33%), Positives = 274/518 (52%), Gaps = 29/518 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + ++N  EA          D++ L L +N +  L +D+  L  L  LN+ +N+L+ +P  
Sbjct: 24  KTHRNLTEA-----LQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKE 78

Query: 87  IGELHMLKSLDVSFNSI--MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
           IG L  L+ L++S N +  + +P++IG    L K    +NQLK LP  +G+  NL +   
Sbjct: 79  IGYLKELQELNLSRNQLTTLTLPNKIGQ---LQKLYLDNNQLKTLPKEIGKLQNLQELYL 135

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +NN + +LP+++    ++  LD+  N+LT L N  I     L +L  S N L  +P+ IG
Sbjct: 136 TNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNE-IGKLQNLQKLDLSGNQLKTLPKEIG 194

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  LDL+ N++ ++P  I     L +  + +N L+ LP E+GKL  L  LDL  NQ
Sbjct: 195 KLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQ 254

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           LK    E  +L+ L  L L  N L  LP EIG +  L+ L L+ N L TL   +      
Sbjct: 255 LKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEI------ 308

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
             L+ L++ L    D++  T  +D I     L +    L L G  L  +P +I +  ++ 
Sbjct: 309 GQLQKLQALLHLG-DNQLKTLPKD-IGYLKELQL----LDLSGNQLKTLPKDIGQLQKLQ 362

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L+L  N ++ LP ++    +LQ L LS N++K  P  I   L  L  L+L NN L+ +P
Sbjct: 363 DLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDI-GQLQKLRVLELYNNQLKTLP 421

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            +    +  LQ L+LS+N + +LP++     L +LQ L L   QL+  P +I +LQ L++
Sbjct: 422 KE-IGQLQKLQELNLSHNKLTTLPKD--IEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQV 478

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+LS N L ++P+    L +L EL L++N ++ LP ++
Sbjct: 479 LNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDI 516



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 173/530 (32%), Positives = 260/530 (49%), Gaps = 53/530 (10%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV-------DLQKLILAHNNIEKLKED 63
            LNL N  L  +P E+   K   E          +        LQKL L +N ++ L ++
Sbjct: 64  KLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQLKTLPKE 123

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +++N+L  LP  IG L  L+ LD+  N +  +P+EIG    L K D S 
Sbjct: 124 IGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSG 183

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQLK LP  +G+  NL +   ++N + +LP+++    ++  LD+  N+LT L N  I   
Sbjct: 184 NQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNE-IGKL 242

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L  S N L  +P+ IG L  L  L L+ N++ ++P  I     L   ++ +N L+
Sbjct: 243 QNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLT 302

Query: 244 ALPAELGKLSKL-GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
            LP E+G+L KL   L L  NQLK    +   L+ L +LDLS N L  LP +IG++  L+
Sbjct: 303 TLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQ 362

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L+T                    LP++            I     L V    
Sbjct: 363 DLELDSNQLKT--------------------LPKD------------IGKLQNLQV---- 386

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+L    L  +P +I +  ++  L+L  N ++ LP E+     LQ L LS NK+   P  
Sbjct: 387 LNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKD 446

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L +L  L L NN L+ +P +    +  LQ+L+LS+N + +LP++     L +LQEL
Sbjct: 447 I-EKLQNLQVLNLTNNQLKTLPKE-IGQLQNLQVLNLSHNKLTTLPKD--IGKLQNLQEL 502

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           YL   QL   P DI +LQ L+ L L+ N L ++P+  + L  L  L L D
Sbjct: 503 YLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVLHLDD 552



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 173/533 (32%), Positives = 272/533 (51%), Gaps = 41/533 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L  +P ++ K               +LQKL L +N +  + +++  L  L  L
Sbjct: 42  LDLNNNQLTTLPKDIGK-------------LQNLQKLNLYNNQLTTIPKEIGYLKELQEL 88

Query: 74  NVSHNKLSEL--PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           N+S N+L+ L  P  IG+L     L +  N +  +P EIG    L +   ++NQLK LP 
Sbjct: 89  NLSRNQLTTLTLPNKIGQLQ---KLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPK 145

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G    L D    +N +T+LP ++     + KLD+ GN+L  L    I     L EL  
Sbjct: 146 EIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKE-IGKLQNLRELDL 204

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG L  L  LDL  N++ ++P+ I    +L +  +  N L  LP E+GK
Sbjct: 205 NDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGK 264

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG-NP 309
           L  L  L L+ NQLK    E   L+ L VL LS+N L+ LP EIG++  L+ LL  G N 
Sbjct: 265 LQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQ 324

Query: 310 LRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           L+TL         P  + YL+  +L +   ++  T  +D I    +L    ++L L+   
Sbjct: 325 LKTL---------PKDIGYLKELQLLDLSGNQLKTLPKD-IGQLQKL----QDLELDSNQ 370

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +P +I +   +  L+LS N ++ LP ++     L+ L L  N++K  P  I   L  
Sbjct: 371 LKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEI-GQLQK 429

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L +N L  +P D  + +  LQ+L+L+ N + +LP+      L +LQ L L   +L
Sbjct: 430 LQELNLSHNKLTTLPKD-IEKLQNLQVLNLTNNQLKTLPK--EIGQLQNLQVLNLSHNKL 486

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P DI +LQ L+ L L+ N L ++P+  + L +L EL L++N ++ LP E+
Sbjct: 487 TTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEI 539


>gi|410920716|ref|XP_003973829.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Takifugu
           rubripes]
          Length = 597

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 189/561 (33%), Positives = 293/561 (52%), Gaps = 57/561 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +L AAR SG LNLS R L +VP  VY+ N D   EA      G+ D+WWE  DL KL+LA
Sbjct: 29  LLNAARKSGQLNLSGRGLIEVPQNVYRINCDVPEEAKQTVFSGDSDRWWEQTDLTKLLLA 88

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N + +L +D+R LP LTVL++  N+LS LP A+ EL  L+ L +S N +  +P  + + 
Sbjct: 89  SNQLTQLSDDIRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHNQLTSLPAWVANL 148

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L  LP  LG   +L +   SNN +  LP ++   + + KL++  NKL+
Sbjct: 149 KNLASLALQFNLLVSLPEELGHLKSLIELDLSNNQLKDLPANVGCLTCLQKLNLSHNKLS 208

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L ++ I   T +  L  S N L  +P ++  +S L +L L  N++  +P+  S    L 
Sbjct: 209 WLPDS-IGQLTKVKMLDCSNNQLTEVPASLSQMSALEQLYLRHNKLDLLPNLKSPV--LK 265

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           + Y GNN +  L P +L  L+ +  L+L  N+++    E   L  L+ LDL+NN +S LP
Sbjct: 266 DLYFGNNQIEQLEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLP 325

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-DLIT 350
             +G ++ L+ +LL GNPLR LR  L+   T  LLKYLR R+ E   S AS  +E   +T
Sbjct: 326 ASLGLLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKYLRGRITE---SSASAAEEPTAMT 382

Query: 351 MATRLSV------TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPELSS 401
           + ++  V      T K L       +AIP E+++A     +T ++ S+N +  +PP L  
Sbjct: 383 LPSQAKVNFHNIQTLKMLQYSEKQTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLE 442

Query: 402 C-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
             +SL  + L  N++    D I  SL  L+ + L NN + ++P++  K++  L+ + L+Y
Sbjct: 443 FQSSLSDINLGFNRLAGC-DPI-CSLLQLTHIDLRNNQMAELPAE-MKNLTKLRSIILNY 499

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKN 519
           N         F S P +  LY              ++  L  + L  N +  + P     
Sbjct: 500 N--------GFKSFPGV--LY--------------QIVSLETILLGNNQVDGVDPSHLMK 535

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L+ L+ LDLS+N++  +PPEL
Sbjct: 536 LSHLSTLDLSNNDLLKIPPEL 556



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 51/336 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L+ L   +N IE+L+ E L +L  ++VL +  NK+  LP  I  L  L  LD++ N I  
Sbjct: 264 LKDLYFGNNQIEQLEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISS 323

Query: 106 IPDEIG-------------------------SATALVKF------DCSSNQLKE-----L 129
           +P  +G                           T L+K+      + S++  +E     L
Sbjct: 324 LPASLGLLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKYLRGRITESSASAAEEPTAMTL 383

Query: 130 PS----SLGRCLNLSDFKASNNCITSLPEDLADCS---KMSKLDVEGNKLTVLSNNLIAS 182
           PS    +      L   + S     ++P+++ D +    ++ ++   N LT +   L+  
Sbjct: 384 PSQAKVNFHNIQTLKMLQYSEKQTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEF 443

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L+++    N L G  + I SL +L  +DL  N++  +P+ +     L    +  N  
Sbjct: 444 QSSLSDINLGFNRLAGC-DPICSLLQLTHIDLRNNQMAELPAEMKNLTKLRSIILNYNGF 502

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
            + P  L ++  L T+ L +NQ+    V+   L     LS LDLSNN L  +PPE+G  T
Sbjct: 503 KSFPGVLYQIVSLETILLGNNQVD--GVDPSHLMKLSHLSTLDLSNNDLLKIPPELGLCT 560

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR L L GNP R  R+++V   T A+++YLRSR+P
Sbjct: 561 SLRCLSLEGNPFRAPRAAIVAKGTDAVMEYLRSRIP 596


>gi|326428302|gb|EGD73872.1| leucine rich repeat containing protein 40 [Salpingoeca sp. ATCC
           50818]
          Length = 535

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 160/493 (32%), Positives = 263/493 (53%), Gaps = 36/493 (7%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKL 50
           D++L  AR SG LN+S R L  +P  V+            +FD     DKWWE+ DLQ+L
Sbjct: 13  DKLLANARKSGQLNISARGLEAIPQAVFHLHEIPPEQTSLSFDSE---DKWWESTDLQRL 69

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           I+A N I ++ +D+  L  LT+L+  +N+L  +   +G L  LK+L+ + N +  IPD +
Sbjct: 70  IVASNEIREIPDDVELLGALTLLDAHNNQLERVSDKLGALQELKALNFAHNKLRAIPDGV 129

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +   L     + NQ++++   +G   +L +   + N + SLPE L   +++ +L +  N
Sbjct: 130 YALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRLAQLRRLALNKN 189

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L  + IA  +++TEL    N L  +P ++ +++ L RLDL  N++ ++P  +    
Sbjct: 190 NLQTLPQS-IAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTALP-RLCNLK 247

Query: 231 SLAEFYMGNNALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           +L E  +G N+++ L      L S L  LD+  N+L++       L+ L  LD++NN L+
Sbjct: 248 ALRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLA 307

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE---------DS 339
            LPPE+G +  L+ ++L GNP+R+LR  ++   T  +LKYLRSR+ E +          S
Sbjct: 308 TLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAELTSGSVQS 367

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELP 396
           EAS  +++ +  A   +  + +LS + + L  +PS+  EA +   I+KL L +N +Q LP
Sbjct: 368 EASAQRQEAVAKAEMKASATLDLSEQKLQL--VPSKQLEAAQGAGISKLVLRKNLLQNLP 425

Query: 397 PELSSCAS-LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
                 AS L  L L  NKI     +I   L +L+ L L  N L  +PS+    +  L+ 
Sbjct: 426 AGTDCLASTLTELDLGFNKIDTLSPSI-ALLGNLTVLDLQGNQLTSLPSE-LISLASLRD 483

Query: 456 LDLSYN-IASLPE 467
           L LS+N    LPE
Sbjct: 484 LILSFNRFRQLPE 496



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 213/502 (42%), Gaps = 79/502 (15%)

Query: 73  LNVSHNKLSELPAAIGELHML--KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           LN+S   L  +P A+  LH +  +   +SF+S     D+   +T L +   +SN+++E+P
Sbjct: 25  LNISARGLEAIPQAVFHLHEIPPEQTSLSFDS----EDKWWESTDLQRLIVASNEIREIP 80

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
                                  +D+     ++ LD   N+L  +S+ L  +   L  L 
Sbjct: 81  -----------------------DDVELLGALTLLDAHNNQLERVSDKL-GALQELKALN 116

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + N L  +P+ + +L  L  L L  N+I  +   I     L E  +  N L +LP  LG
Sbjct: 117 FAHNKLRAIPDGVYALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLG 176

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L++L  L L+ N L+       QL L + L++ +NSL+ +P  +  M +L +L L  N 
Sbjct: 177 RLAQLRRLALNKNNLQTLPQSIAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNK 236

Query: 310 LRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL-ITMATRLSVTSKELSLEGM 367
           L  L       P    LK LR   L  N    + TT  D+  T+ + L +    L +   
Sbjct: 237 LTAL-------PRLCNLKALRELSLGFN----SITTLGDIRATLPSGLCI----LDVRDN 281

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS--------RNKIKDWP 419
            L  +   I     + +LD++ N +  LPPEL     L++++L         R+ I    
Sbjct: 282 KLRDLSPSIVHLQALERLDVTNNDLATLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGT 341

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ--------------ILDLSYNIASL 465
             IL  L S    ++    L ++ S   +     Q               LDLS     L
Sbjct: 342 QGILKYLRS----RMTEEQLAELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQL 397

Query: 466 PENPPFSSL--PHLQELYLRRMQLREAP--TDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
             +    +     + +L LR+  L+  P  TD L    L  LDL  N + ++      L 
Sbjct: 398 VPSKQLEAAQGAGISKLVLRKNLLQNLPAGTDCLA-STLTELDLGFNKIDTLSPSIALLG 456

Query: 522 SLTELDLSDNNISALPPELVSV 543
           +LT LDL  N +++LP EL+S+
Sbjct: 457 NLTVLDLQGNQLTSLPSELISL 478



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 29/197 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-----------SLQT 407
           S +L++    L AIP  ++              + E+PPE +S +            LQ 
Sbjct: 22  SGQLNISARGLEAIPQAVFH-------------LHEIPPEQTSLSFDSEDKWWESTDLQR 68

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           LI++ N+I++ PD +   L +L+ L   NN L +V SD    +  L+ L+ ++N + ++P
Sbjct: 69  LIVASNEIREIPDDV-ELLGALTLLDAHNNQLERV-SDKLGALQELKALNFAHNKLRAIP 126

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +     +L HL+ L L   Q+++    I  L  L  LDL++N L+S+PE    L  L  L
Sbjct: 127 DG--VYALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRLAQLRRL 184

Query: 527 DLSDNNISALPPELVSV 543
            L+ NN+  LP  +  +
Sbjct: 185 ALNKNNLQTLPQSIAQL 201


>gi|26375000|dbj|BAB27802.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 184/561 (32%), Positives = 288/561 (51%), Gaps = 54/561 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +   I LS NK        L+ +S   CL                 +  L  LDL  N
Sbjct: 448 KEMVLDINLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNN 482

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKN 519
            ++SLPE    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K 
Sbjct: 483 FLSSLPEE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKL 540

Query: 520 LTSLTELDLSDNNISALPPEL 540
           + +L  LDL +N++  +PPEL
Sbjct: 541 MENLNTLDLQNNDLLQIPPEL 561



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +     L     S+   T +P+DL D +K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 447 LKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
               P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQ 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 219/520 (42%), Gaps = 92/520 (17%)

Query: 73  LNVSHNKLSELPAAIGELHM----LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LN++   L E+P  +  +++      + ++SF+S  +  D+    T L K   SSN+L+ 
Sbjct: 41  LNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQ----TDLTKLIISSNKLQS 96

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           L   L     L+     +N +TSLP  + +   + KL+V  NKL +L             
Sbjct: 97  LSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKIL------------- 143

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      PE I SL  L  L L  N +  IP        L +  + +N L+ +PA+
Sbjct: 144 -----------PEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPAD 192

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              LS L  L+L SNQLK    E  ++ RL  LD   N L  +PP++G M +L  L L  
Sbjct: 193 FALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRR 252

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N LR L       P+   LK L   L EN+  +     E L  +   L      L L G 
Sbjct: 253 NKLRVLPE----FPSCRQLKELH--LAENQIEKLGA--EHLQHLQAILV-----LDLRGN 299

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELP----------------------PELSSCASL 405
            L ++P E+     + +LDLS N I  LP                       E+ +  + 
Sbjct: 300 KLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQ 359

Query: 406 QTLILSRNKIKD--------WPDAILT-------SLSSLSCLKLDNNPLRQ---VPSDGF 447
           + L   R+KIKD         P+  +T       ++ +++ LKL +   +Q   +P D F
Sbjct: 360 EVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYSDKQATLIPDDLF 419

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL----RRMQLREAPTDILRLQQLRIL 503
                  I  ++++   L E P    +  L+E+ L       +L     ++  LQ+L  L
Sbjct: 420 DATKTTLITSINFSKNQLCEIP--QRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFL 477

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DL  N L S+PE   +LT L  ++LS N     P  L  +
Sbjct: 478 DLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRI 517



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 170/394 (43%), Gaps = 63/394 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  E +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           N + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 585


>gi|81916778|sp|Q9CRC8.2|LRC40_MOUSE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|26383433|dbj|BAB30951.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 184/561 (32%), Positives = 288/561 (51%), Gaps = 54/561 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +   I LS NK        L+ +S   CL                 +  L  LDL  N
Sbjct: 448 KEMVLDINLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNN 482

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKN 519
            ++SLPE    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K 
Sbjct: 483 FLSSLPEE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKL 540

Query: 520 LTSLTELDLSDNNISALPPEL 540
           + +L  LDL +N++  +PPEL
Sbjct: 541 MENLNTLDLQNNDLLQIPPEL 561



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +     L     S+   T +P+DL D +K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 447 LKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
               P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQ 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 219/520 (42%), Gaps = 92/520 (17%)

Query: 73  LNVSHNKLSELPAAIGELHM----LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LN++   L E+P  +  +++      + ++SF+S  +  D+    T L K   SSN+L+ 
Sbjct: 41  LNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQ----TDLTKLIISSNKLQS 96

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           L   L     L+     +N +TSLP  + +   + KL+V  NKL +L             
Sbjct: 97  LSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKIL------------- 143

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      PE I SL  L  L L  N +  IP        L +  + +N L+ +PA+
Sbjct: 144 -----------PEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPAD 192

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              LS L  L+L SNQLK    E  ++ RL  LD   N L  +PP++G M +L  L L  
Sbjct: 193 FALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRR 252

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N LR L       P+   LK L   L EN+  +     E L  +   L      L L G 
Sbjct: 253 NKLRVLPE----FPSCRQLKELH--LAENQIEKLGA--EHLQHLQAILV-----LDLRGN 299

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELP----------------------PELSSCASL 405
            L ++P E+     + +LDLS N I  LP                       E+ +  + 
Sbjct: 300 KLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQ 359

Query: 406 QTLILSRNKIKD--------WPDAILT-------SLSSLSCLKLDNNPLRQ---VPSDGF 447
           + L   R+KIKD         P+  +T       ++ +++ LKL +   +Q   +P D F
Sbjct: 360 EVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYSDKQATLIPDDLF 419

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL----RRMQLREAPTDILRLQQLRIL 503
                  I  ++++   L E P    +  L+E+ L       +L     ++  LQ+L  L
Sbjct: 420 DATKTTLITSINFSKNQLCEIP--QRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFL 477

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DL  N L S+PE   +LT L  ++LS N     P  L  +
Sbjct: 478 DLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRI 517



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 170/394 (43%), Gaps = 63/394 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  E +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           N + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 585


>gi|31541911|ref|NP_077156.2| leucine-rich repeat-containing protein 40 [Mus musculus]
 gi|26330340|dbj|BAC28900.1| unnamed protein product [Mus musculus]
 gi|74194456|dbj|BAE37277.1| unnamed protein product [Mus musculus]
 gi|148679901|gb|EDL11848.1| leucine rich repeat containing 40, isoform CRA_a [Mus musculus]
          Length = 602

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 184/561 (32%), Positives = 288/561 (51%), Gaps = 54/561 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +   I LS NK        L+ +S   CL                 +  L  LDL  N
Sbjct: 448 KEMVLDINLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNN 482

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKN 519
            ++SLPE    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K 
Sbjct: 483 FLSSLPEE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKL 540

Query: 520 LTSLTELDLSDNNISALPPEL 540
           + +L  LDL +N++  +PPEL
Sbjct: 541 MENLNTLDLQNNDLLQIPPEL 561



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +     L     S+   T +P+DL D +K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 447 LKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
               P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQ 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 219/520 (42%), Gaps = 92/520 (17%)

Query: 73  LNVSHNKLSELPAAIGELHM----LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LN++   L E+P  +  +++      + ++SF+S  +  D+    T L K   SSN+L+ 
Sbjct: 41  LNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQ----TDLTKLIISSNKLQS 96

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           L   L     L+     +N +TSLP  + +   + KL+V  NKL +L             
Sbjct: 97  LSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKIL------------- 143

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      PE I SL  L  L L  N +  IP        L +  + +N L+ +PA+
Sbjct: 144 -----------PEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPAD 192

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              LS L  L+L SNQLK    E  ++ RL  LD   N L  +PP++G M +L  L L  
Sbjct: 193 FALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRR 252

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N LR L       P+   LK L   L EN+  +     E L  +   L      L L G 
Sbjct: 253 NKLRVLPE----FPSCRQLKELH--LAENQIEKLGA--EHLQHLQAILV-----LDLRGN 299

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELP----------------------PELSSCASL 405
            L ++P E+     + +LDLS N I  LP                       E+ +  + 
Sbjct: 300 KLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQ 359

Query: 406 QTLILSRNKIKD--------WPDAILT-------SLSSLSCLKLDNNPLRQ---VPSDGF 447
           + L   R+KIKD         P+  +T       ++ +++ LKL +   +Q   +P D F
Sbjct: 360 EVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYSDKQATLIPDDLF 419

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL----RRMQLREAPTDILRLQQLRIL 503
                  I  ++++   L E P    +  L+E+ L       +L     ++  LQ+L  L
Sbjct: 420 DATKTTLITSINFSKNQLCEIP--QRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFL 477

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DL  N L S+PE   +LT L  ++LS N     P  L  +
Sbjct: 478 DLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRI 517



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 170/394 (43%), Gaps = 63/394 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  E +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           N + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 585


>gi|299470923|emb|CBN79907.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 744

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 256/497 (51%), Gaps = 59/497 (11%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFD--EAGEGDKWWEAVDLQKLILAHNNIE 58
           + ++LK AR+SGSLNL+++ L +VP +V+   D  +A +G+K+WEA +LQ+L L+ N I 
Sbjct: 68  LQQLLKQARSSGSLNLTSKGLEEVPGQVFNLLDGVDAADGEKFWEACELQRLDLSFNQIT 127

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALV 117
           +L   + NL +L  L +  N+LS +P  +  L  L  LD++ N+I ++P+E +G+A AL 
Sbjct: 128 ELPAAVSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIRELPEEGLGAAVALK 187

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               S N+L  LPSS+G    L   + S+N I SLPE +    +++ L V  N L  L  
Sbjct: 188 GLLLSGNRLSRLPSSVGSLHGLETLELSDNTIRSLPESIDGLKRLATLTVSNNGLASLPE 247

Query: 178 NLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           + +     +  L  S+N +  +P+  +  L  L  LDL +N++  +P    G   LA+ +
Sbjct: 248 S-VGGLRSVKLLDFSRNGIETVPKNGLARLGALTSLDLRENKLTEVPPLPEG-GRLAQVF 305

Query: 237 MGNNALSAL--PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           +G N L++L   A LG  + L  L + SN++ +   E   L RL  LD+SNN L  LP  
Sbjct: 306 LGFNLLTSLDGAALLGVSAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAA 365

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP---------------ENED 338
           +G +  L +L + GNPLRT+R SL++G   +L KYLR+R P                   
Sbjct: 366 LGYLPHLHRLAVDGNPLRTIRRSLLSGGASSLKKYLRTRGPCPDYPGLEAADEDDDAAAS 425

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE-------------AG----- 380
           S      ED +   +R ++ +  L +EG  ++++P  +++             +G     
Sbjct: 426 SGGGGLSEDAVQAVSRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQA 485

Query: 381 -----------------EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
                             I +LDLS N + E+PP + +C  LQTL+L+ N + D      
Sbjct: 486 FLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPW 545

Query: 424 TSLSSLSCLKLDNNPLR 440
            +L SL  L L NN LR
Sbjct: 546 AALGSLETLDLSNNRLR 562



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 143/313 (45%), Gaps = 27/313 (8%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           +  L +L +  N I +L E++ +L  L  L+VS+N L ELPAA+G L  L  L V  N +
Sbjct: 323 SAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAALGYLPHLHRLAVDGNPL 382

Query: 104 MKIPDEI--GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
             I   +  G A++L K+  +     + P       +     +S      L ED      
Sbjct: 383 RTIRRSLLSGGASSLKKYLRTRGPCPDYPGLEAADEDDDAAASSGGG--GLSEDAVQAVS 440

Query: 162 MSKL-----DVEGNKLTVLSNNLIA---SWTMLTELIASKNLLNGM--PETI---GSL-- 206
            S L     DVEG  +T L   L     + + +T    S N L     P  I   GSL  
Sbjct: 441 RSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQAFLAPPAIAPPGSLPL 500

Query: 207 SRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALS---ALP-AELGKLSKLGTLDLH 261
           S  IR LDL  N +  +P +I  C  L    +  N LS    LP A LG L    TLDL 
Sbjct: 501 SISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLE---TLDLS 557

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           +N+L+          L  L+L NN +S +P E+G  T L  LLL GNP R +  SL+   
Sbjct: 558 NNRLRCLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRG 617

Query: 322 TPALLKYLRSRLP 334
           T A L YLR RLP
Sbjct: 618 TVATLAYLRDRLP 630



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 126/313 (40%), Gaps = 60/313 (19%)

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  LDL  NQ+ E       L + V L L  N LS +PPE+  + +L  L LTGN +R 
Sbjct: 115 ELQRLDLSFNQITELPAAVSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIR- 173

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                               LPE     A               V  K L L G  LS +
Sbjct: 174 -------------------ELPEEGLGAA---------------VALKGLLLSGNRLSRL 199

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           PS +     +  L+LS N+I+ LP  +     L TL +S N +   P+++   L S+  L
Sbjct: 200 PSSVGSLHGLETLELSDNTIRSLPESIDGLKRLATLTVSNNGLASLPESV-GGLRSVKLL 258

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFSSL-------------- 474
               N +  VP +G   +  L  LDL  N    +  LPE    + +              
Sbjct: 259 DFSRNGIETVPKNGLARLGALTSLDLRENKLTEVPPLPEGGRLAQVFLGFNLLTSLDGAA 318

Query: 475 -----PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
                  L EL+++  ++ + P ++  L +L+ LD+S N L  +P     L  L  L + 
Sbjct: 319 LLGVSAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAALGYLPHLHRLAVD 378

Query: 530 DNNISALPPELVS 542
            N +  +   L+S
Sbjct: 379 GNPLRTIRRSLLS 391



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L+G++ +A   + WEA E+ +LDLS N I ELP  +S+ + L +L L +N++   P  + 
Sbjct: 99  LDGVD-AADGEKFWEACELQRLDLSFNQITELPAAVSNLSVLVSLKLRKNRLSSVPPELF 157

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
           +  S         N +R++P +G      L+ L LS N                      
Sbjct: 158 SLESLSLLDL-TGNAIRELPEEGLGAAVALKGLLLSGN---------------------- 194

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             +L   P+ +  L  L  L+LS N+++S+PE    L  L  L +S+N +++LP
Sbjct: 195 --RLSRLPSSVGSLHGLETLELSDNTIRSLPESIDGLKRLATLTVSNNGLASLP 246



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 33/210 (15%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPD 420
           L L    LS++P E++    ++ LDL+ N+I+ELP E L +  +L+ L+LS N++   P 
Sbjct: 142 LKLRKNRLSSVPPELFSLESLSLLDLTGNAIRELPEEGLGAAVALKGLLLSGNRLSRLPS 201

Query: 421 AILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           ++  SL  L  L+L +N +R +P   DG K +  L + +    +ASLPE+     L  ++
Sbjct: 202 SV-GSLHGLETLELSDNTIRSLPESIDGLKRLATLTVSN--NGLASLPES--VGGLRSVK 256

Query: 479 ELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPE------------GFKNLTSL-- 523
            L   R  +   P + L RL  L  LDL +N L  +P             GF  LTSL  
Sbjct: 257 LLDFSRNGIETVPKNGLARLGALTSLDLRENKLTEVPPLPEGGRLAQVFLGFNLLTSLDG 316

Query: 524 ----------TELDLSDNNISALPPELVSV 543
                     TEL +  N I  LP E+ S+
Sbjct: 317 AALLGVSAGLTELHVQSNRIGQLPEEVGSL 346


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 266/520 (51%), Gaps = 43/520 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH--------------- 91
           L++L L+ N +  + E++  L  +T L ++ N+L+ LP  IG+L                
Sbjct: 290 LRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSV 349

Query: 92  --------MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
                    LK LD++ N +  +P EIG  T+L+      NQL  +P+ +G+   +++  
Sbjct: 350 PAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELY 409

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            + N +TSLP ++   + +++L + GN+LT +    I     LTEL  S N L  +P  I
Sbjct: 410 LNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAE-IGQLRSLTELNLSSNQLTNVPAEI 468

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L       L  N++ S+P+ I    SL EF +  N L+++PAE+G+L+ L  L L  N
Sbjct: 469 GQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDN 528

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +L     E  +LR L  L L  N L+ +P E+G++T+L KL L  N L ++         
Sbjct: 529 KLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSV--------- 579

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
           P  +  L S +  N  +   T+    I   T L     EL L    L+++P+EIW+   +
Sbjct: 580 PVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSL----WELWLHDNELTSVPAEIWQLTSL 635

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            +L L+ N +  +P E+    SL+TL L  N++   P A +  L+SL  L LD+N L  V
Sbjct: 636 RELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVP-AEIGQLTSLETLDLDDNKLTSV 694

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQL 500
           P+D  + +  L+ L+L  N + S PE      L  L+EL LR  +L  + P +I +L  L
Sbjct: 695 PADILQQLTSLESLELGDNHLTSWPEE--IGQLTSLKELTLRGNKLTTSVPAEIGQLTSL 752

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL  N L S+P     LTSL  L L+DN ++++P EL
Sbjct: 753 KTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAEL 792



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 161/483 (33%), Positives = 251/483 (51%), Gaps = 25/483 (5%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L V  N L+ +PA IG L  L+ L +S N +  +P+EIG  TA+ +   +
Sbjct: 260 EVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLN 319

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  +L   +   N +TS+P ++   + +  LD+  N+LT +    I  
Sbjct: 320 ANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAE-IGQ 378

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T L  L   KN L  +P  IG L+ +  L L+ N++ S+P+ I     L E Y+  N L
Sbjct: 379 LTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQL 438

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+G+L  L  L+L SNQL     E  QLR      LS N L+ +P EIG++T+L 
Sbjct: 439 TSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLE 498

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTS 359
           +  L+GN L ++         PA +  L S  RL   ++   S   E       RL    
Sbjct: 499 EFGLSGNQLTSV---------PAEIGRLTSLERLWLEDNKLTSVPAE-----IGRLRAL- 543

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L G  L+++P+E+ +   + KLDL  N +  +P E+    SL +L L  N++   P
Sbjct: 544 EWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVP 603

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
            A +  L+SL  L L +N L  VP++ ++ +  L+ L L+ N + S+P       L  L+
Sbjct: 604 -AEIGQLTSLWELWLHDNELTSVPAEIWQ-LTSLRELSLAVNQLTSVPAE--IGQLTSLK 659

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALP 537
            L L   QL   P +I +L  L  LDL  N L S+P    + LTSL  L+L DN++++ P
Sbjct: 660 TLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWP 719

Query: 538 PEL 540
            E+
Sbjct: 720 EEI 722



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 252/528 (47%), Gaps = 52/528 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L  VP E+ +                L+ L L +N +  +  ++  L  L  L
Sbjct: 339 LQLGGNQLTSVPAEIRQ-------------LTSLKCLDLNNNQLTSVPAEIGQLTSLISL 385

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ +PA IG+L  +  L ++ N +  +P EI   T L +     NQL  +P+ +
Sbjct: 386 HLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEI 445

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L++   S+N +T++P ++       +  + GN+LT +    I   T L E   S 
Sbjct: 446 GQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAE-IGQLTSLEEFGLSG 504

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L RL L  N++ S+P+ I    +L   Y+  N L+++PAE+G+L+
Sbjct: 505 NQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLT 564

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQL    VE  QL  L  L+L NN L+ +P EIG++T+L +L L  N L +
Sbjct: 565 SLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTS 624

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S                            +ELSL    L+++
Sbjct: 625 V---------PAEIWQLTSL---------------------------RELSLAVNQLTSV 648

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   +  L+L  N +  +P E+    SL+TL L  NK+   P  IL  L+SL  L
Sbjct: 649 PAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESL 708

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           +L +N L   P +    +  L+ L L  N  +         L  L+ L LR  QL   P 
Sbjct: 709 ELGDNHLTSWPEE-IGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPA 767

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I +L  LR L L+ N L S+P     LTSL  L L  N ++ +P E+
Sbjct: 768 EIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEI 815



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 248/521 (47%), Gaps = 58/521 (11%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+KL L HN +  +  ++  L  L  LN+ +N+L+ +PA IG+L  L  L +  N +  +
Sbjct: 566  LEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSV 625

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            P EI   T+L +   + NQL  +P+ +G+  +L   +   N +TS+P ++   + +  LD
Sbjct: 626  PAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLD 685

Query: 167  VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            ++ NKLT +  +++   T L  L    N L   PE IG L+ L  L L            
Sbjct: 686  LDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLR----------- 734

Query: 227  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                       GN   +++PAE+G+L+ L TLDL  NQL     E  QL  L  L L++N
Sbjct: 735  -----------GNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDN 783

Query: 286  SLSGLPPEIGKMTTLRKLLLTGNPLRTL------------RSSLVNGPT----------- 322
             L+ +P E+G++T+L  L L GN L  +            R  L +G T           
Sbjct: 784  RLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALR 843

Query: 323  --PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               A+   L+   PE+E  E        +TM     V   EL + G+   A+P+E+    
Sbjct: 844  TWRAMCPDLQGMWPEDEQPEDWYR----VTMENDGRVVQLELEVFGLT-GAVPAELGRLS 898

Query: 381  EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
             +  L L  N +  LP E+    SL+ L L+ N++   P A +  L+SL  L L  N L 
Sbjct: 899  ALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVP-AEIGQLTSLRELYLYENQLT 957

Query: 441  QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
             VP++    +  L  L+L  N + SLP       L  L++L L   QL   P +I +L  
Sbjct: 958  SVPAE-IGQLTALARLELRDNQLTSLPAE--IGQLAALEKLSLDSNQLTSVPAEIGQLTS 1014

Query: 500  LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L+ L LS N L S+P     LTSL EL L  N ++++P E+
Sbjct: 1015 LKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEI 1055



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 267/534 (50%), Gaps = 51/534 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L +L L  N +  +  ++  L  LT LN+S N+L+ +PA IG+L   +   +S N
Sbjct: 423 WQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGN 482

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG  T+L +F  S NQL  +P+ +GR  +L      +N +TS+P ++     
Sbjct: 483 QLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRA 542

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L + GN+LT +    +   T L +L    N L  +P  +G L+ L+ L+L  NR+ S
Sbjct: 543 LEWLYLHGNQLTSVPAE-VGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTS 601

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL E ++ +N L+++PAE+ +L+ L  L L  NQL     E  QL  L  L
Sbjct: 602 VPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTL 661

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +L  N L+ +P EIG++T+L  L L  N L ++ + ++   T   L+ L     E  D+ 
Sbjct: 662 ELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTS--LESL-----ELGDNH 714

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            ++  E++  + +      KEL+L G  L +++P+EI +   +  LDL  N +  +P E+
Sbjct: 715 LTSWPEEIGQLTSL-----KELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEI 769

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI-LDL 458
               SL+ L L+ N++   P A L  L+SL  L L  N L  VP++  +++      +DL
Sbjct: 770 GQLTSLRWLWLNDNRLTSVP-AELGQLTSLEGLWLKGNQLTIVPAE-IRELKAAGCRVDL 827

Query: 459 SYNIASLPENPPFSSL-------PHLQELY-----------------LRRMQLR------ 488
              + ++ E     +L       P LQ ++                  R +QL       
Sbjct: 828 DDGV-TMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGL 886

Query: 489 --EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
               P ++ RL  LR L L  N + S+P     LTSL  L L++N ++++P E+
Sbjct: 887 TGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEI 940



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 175/353 (49%), Gaps = 27/353 (7%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G L+ L  L +  N + S+P+ I    SL E ++  N L+++P E+G+L+
Sbjct: 252 GLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLT 311

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  L L++NQL    VE  QLR L +L L  N L+ +P EI ++T+L+ L L  N L +
Sbjct: 312 AMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTS 371

Query: 313 LRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           +         PA +  L S     L +N+ +        L  M         EL L    
Sbjct: 372 V---------PAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMT--------ELYLNANQ 414

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P+EIW+   +T+L L  N +  +P E+    SL  L LS N++ + P A +  L S
Sbjct: 415 LTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVP-AEIGQLRS 473

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
                L  N L  VP++    +  L+   LS N + S+P       L  L+ L+L   +L
Sbjct: 474 RREFGLSGNQLTSVPAE-IGQLTSLEEFGLSGNQLTSVPAE--IGRLTSLERLWLEDNKL 530

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I RL+ L  L L  N L S+P     LTSL +LDL  N ++++P E+
Sbjct: 531 TSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEV 583



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 206/460 (44%), Gaps = 84/460 (18%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            +L+L +  L  VP ++ +                L+ L L  N++    E++  L  L  
Sbjct: 683  TLDLDDNKLTSVPADILQQL------------TSLESLELGDNHLTSWPEEIGQLTSLKE 730

Query: 73   LNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L +  NKL+  +PA IG+L  LK+LD+  N +  +P EIG  T+L     + N+L  +P+
Sbjct: 731  LTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPA 790

Query: 132  SLGRCLNLSDFKASNNCITSLPEDLADCSKMS-KLDV-------EGNKLTVLSN------ 177
             LG+  +L       N +T +P ++ +      ++D+       EG+    L        
Sbjct: 791  ELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRAMCP 850

Query: 178  NLIASW------------TM-----LTEL-IASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            +L   W            TM     + +L +    L   +P  +G LS L  L LH N++
Sbjct: 851  DLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHGNQV 910

Query: 220  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
             S+P+ I    SL   Y+  N L+++PAE+G+L+ L  L L+ NQL     E  QL  L+
Sbjct: 911  TSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALA 970

Query: 279  VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
             L+L +N L+ LP EIG++  L KL L  N L ++         PA +  L S       
Sbjct: 971  RLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSV---------PAEIGQLTSL------ 1015

Query: 339  SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                 K L L    L+++P++I +   + +L L  N +  +P E
Sbjct: 1016 ---------------------KTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEE 1054

Query: 399  LSSCASLQTLILSRNKIKDWPDAILTSLSSLSC-LKLDNN 437
            +    SLQ L L +N++   P AI   L ++ C + LD+ 
Sbjct: 1055 IGQLTSLQGLYLWQNRLTSVPAAI-RELRAVGCYVNLDDG 1093


>gi|427794929|gb|JAA62916.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 179/571 (31%), Positives = 287/571 (50%), Gaps = 39/571 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           ++K AR SG LNL+   L DVP++++               + DE  +GD+WW+  DL K
Sbjct: 22  MIKLARKSGELNLTGVGLSDVPDQLWNINNLTEDERRELSISLDEC-DGDRWWDQADLTK 80

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N++  L  D+     L +L ++ N L+ LP  IG LH L  L++S N + ++PD 
Sbjct: 81  LYLSSNSLSSLSPDIEKFHALLILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDS 140

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L +     N + EL   +G    L     S+N ++SLP  +   S+ + +++  
Sbjct: 141 FYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSH 200

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L    I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C
Sbjct: 201 NSLAELPPE-IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALP-PFTSC 258

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             L E ++GNNA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L
Sbjct: 259 GRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNL 318

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS----- 342
           + LP E+G +  L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A      
Sbjct: 319 ASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSG 378

Query: 343 ----TTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQE 394
                   DLI    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ 
Sbjct: 379 GAGLNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALES 438

Query: 395 LPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
           +P  L ++C  +  L LS NK+   P   L   + L+ L L NN L  +P +    +  +
Sbjct: 439 VPKGLEAACPVVTELNLSFNKLTALP-GFLCLATRLTFLDLRNNQLSDLPGE-MSVLSNV 496

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQ 511
           + + LS+N  + +PE    +S   L+ L+    ++ E  T  L +L+ + +LDL  NS++
Sbjct: 497 REVSLSFNRFSRIPE--VVTSWQSLEILFASDNKIEELDTTQLQKLKHIAVLDLRNNSIR 554

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            +P    N+  L  L L  N      P ++S
Sbjct: 555 QVPPELGNMRQLRSLQLEGNPFRNPRPAILS 585



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 163/352 (46%), Gaps = 46/352 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ N ++ + P EV +              + L+ L L  N +  L  D+  +  L  L
Sbjct: 264 LHVGNNAMEEFPIEVIETL------------LSLKTLDLKSNKLSTLSPDITMIQGLERL 311

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L+ LP  +G L  LK L V  N +  I  +I     +       ++L E P   
Sbjct: 312 DLSNNNLASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGA 371

Query: 134 GR-----CLNLSD------------------FKASNNCITSLPEDL----ADCSKMSKLD 166
            R        L+D                   + S   +  +PE++    A+C   + +D
Sbjct: 372 ARKRLSGGAGLNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDA-NTID 430

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P  +
Sbjct: 431 LSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPGEM 490

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
           S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VLDL
Sbjct: 491 SVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVLDL 548

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 549 RNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 32/201 (15%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P  I     +TKL++SRN +Q LP        L+ L+   N I +  D I  +LS 
Sbjct: 111 LTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQLKELRQLLAHHNDIAELSDDI-GNLSL 169

Query: 429 LSCLKLDNNPLRQVPS---------------DGFKDIP-------MLQILDLSYN-IASL 465
           L  + L +N L  +P+               +   ++P        LQILD+S N + SL
Sbjct: 170 LELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRSL 229

Query: 466 PENPPFSSLPHLQELYLRRMQLREAP--TDILRLQQLRILDLSQNSLQSIP-EGFKNLTS 522
           PE+    SL HL++L+ ++ +L   P  T   RL +L +     N+++  P E  + L S
Sbjct: 230 PES--IGSLCHLEQLFAQQNELTALPPFTSCGRLMELHV---GNNAMEEFPIEVIETLLS 284

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  LDL  N +S L P++  +
Sbjct: 285 LKTLDLKSNKLSTLSPDITMI 305



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 36/208 (17%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           +L+  S EL+L G+ LS +P ++W    +T+     +  +EL   L  C          +
Sbjct: 24  KLARKSGELNLTGVGLSDVPDQLWNINNLTE-----DERRELSISLDEC----------D 68

Query: 414 KIKDWPDAILTS-----------------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             + W  A LT                    +L  L+L++N L  +P D   ++  L  L
Sbjct: 69  GDRWWDQADLTKLYLSSNSLSSLSPDIEKFHALLILELNDNALTSLP-DTIGNLHHLTKL 127

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           ++S N +  LP++  F  L  L++L      + E   DI  L  L ++DLS N L S+P 
Sbjct: 128 NISRNKLQRLPDS--FYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPA 185

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
               L+    ++LS N+++ LPPE+ S+
Sbjct: 186 MIGFLSRAANVNLSHNSLAELPPEIGSM 213


>gi|427794931|gb|JAA62917.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 179/571 (31%), Positives = 287/571 (50%), Gaps = 39/571 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           ++K AR SG LNL+   L DVP++++               + DE  +GD+WW+  DL K
Sbjct: 22  MIKLARKSGELNLTGVGLSDVPDQLWNINNLTEDERKELSISLDEC-DGDRWWDQADLTK 80

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N++  L  D+     L +L ++ N L+ LP  IG LH L  L++S N + ++PD 
Sbjct: 81  LYLSSNSLSSLSPDIEKFHALLILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDS 140

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L +     N + EL   +G    L     S+N ++SLP  +   S+ + +++  
Sbjct: 141 FYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSH 200

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L    I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C
Sbjct: 201 NSLAELPPE-IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALP-PFTSC 258

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             L E ++GNNA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L
Sbjct: 259 GRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNL 318

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS----- 342
           + LP E+G +  L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A      
Sbjct: 319 ASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSG 378

Query: 343 ----TTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQE 394
                   DLI    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ 
Sbjct: 379 GAALNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALES 438

Query: 395 LPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
           +P  L ++C  +  L LS NK+   P   L   + L+ L L NN L  +P +    +  +
Sbjct: 439 VPKGLEAACPVVTELNLSFNKLTALP-GFLCLATRLTFLDLRNNQLSDLPGE-MSVLSNV 496

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQ 511
           + + LS+N  + +PE    +S   L+ L+    ++ E  T  L +L+ + +LDL  NS++
Sbjct: 497 REVSLSFNRFSRIPE--VVTSWQSLEILFASDNKIEELDTTQLQKLKHIAVLDLRNNSIR 554

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            +P    N+  L  L L  N      P ++S
Sbjct: 555 QVPPELGNMRQLRSLQLEGNPFRNPRPAILS 585



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 46/352 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ N ++ + P EV +              + L+ L L  N +  L  D+  +  L  L
Sbjct: 264 LHVGNNAMEEFPIEVIETL------------LSLKTLDLKSNKLSTLSPDITMIQGLERL 311

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-- 131
           ++S+N L+ LP  +G L  LK L V  N +  I  +I     +       ++L E P   
Sbjct: 312 DLSNNNLASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGA 371

Query: 132 -----SLGRCLN--------LSDF--------KASNNCITSLPEDL----ADCSKMSKLD 166
                S G  LN        +  F        + S   +  +PE++    A+C   + +D
Sbjct: 372 ARKRLSGGAALNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDA-NTID 430

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P  +
Sbjct: 431 LSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPGEM 490

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
           S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VLDL
Sbjct: 491 SVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVLDL 548

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 549 RNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 32/201 (15%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P  I     +TKL++SRN +Q LP        L+ L+   N I +  D I  +LS 
Sbjct: 111 LTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQLKELRQLLAHHNDIAELSDDI-GNLSL 169

Query: 429 LSCLKLDNNPLRQVPS---------------DGFKDIP-------MLQILDLSYN-IASL 465
           L  + L +N L  +P+               +   ++P        LQILD+S N + SL
Sbjct: 170 LELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRSL 229

Query: 466 PENPPFSSLPHLQELYLRRMQLREAP--TDILRLQQLRILDLSQNSLQSIP-EGFKNLTS 522
           PE+    SL HL++L+ ++ +L   P  T   RL +L +     N+++  P E  + L S
Sbjct: 230 PES--IGSLCHLEQLFAQQNELTALPPFTSCGRLMELHV---GNNAMEEFPIEVIETLLS 284

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  LDL  N +S L P++  +
Sbjct: 285 LKTLDLKSNKLSTLSPDITMI 305



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 36/208 (17%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           +L+  S EL+L G+ LS +P ++W    +T+     +  +EL   L  C          +
Sbjct: 24  KLARKSGELNLTGVGLSDVPDQLWNINNLTE-----DERKELSISLDEC----------D 68

Query: 414 KIKDWPDAILTS-----------------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             + W  A LT                    +L  L+L++N L  +P D   ++  L  L
Sbjct: 69  GDRWWDQADLTKLYLSSNSLSSLSPDIEKFHALLILELNDNALTSLP-DTIGNLHHLTKL 127

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           ++S N +  LP++  F  L  L++L      + E   DI  L  L ++DLS N L S+P 
Sbjct: 128 NISRNKLQRLPDS--FYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPA 185

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
               L+    ++LS N+++ LPPE+ S+
Sbjct: 186 MIGFLSRAANVNLSHNSLAELPPEIGSM 213


>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Oreochromis niloticus]
          Length = 597

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 186/551 (33%), Positives = 292/551 (52%), Gaps = 31/551 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L++VP  V++ N D   EA      G  D+WWE  DL KL+L+
Sbjct: 28  LLKAARKSGQLNLSGRGLKEVPQNVFRLNIDTPEEAQQNVSFGAADRWWEQTDLTKLLLS 87

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N I  L +D+R LP LT L++  N+LS LP+A+GEL  L+ L +S N +  +P E+ + 
Sbjct: 88  SNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCTL 147

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  LG+ +NL++   S+N + SLP        + K+++  N+L+
Sbjct: 148 ENLRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLS 207

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L ++L A  T +  L  S N L  +P ++  +  L +L L  N++  +P   +   +L 
Sbjct: 208 GLPDSL-ARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLRLLPKLPAP--ALK 264

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E Y+GNN +  L  E L  LS +  L+L +N++K    E   L  L+ LDL+NN ++ LP
Sbjct: 265 ELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLP 324

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L  LLL GNPLR +R  +++  T  LLKYLR R+ E  +         ++  
Sbjct: 325 ASLSLLPNLNVLLLEGNPLRGIRRDILSKGTGELLKYLRGRVKEEPEKTDGGDTAMMLPS 384

Query: 352 ATRLSV----TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPE-LSSCA 403
             R++V    T K L+       +IP E+++A     I  ++ S+N +  +PP  L   +
Sbjct: 385 QARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSKNQLTSVPPRLLEFQS 444

Query: 404 SLQTLILSRNK-IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
           SL  + L  N+ I   PD  +  L  L+ + L NN L  +PS+  +++  L+ + L YN 
Sbjct: 445 SLSEINLGFNRLISCSPD--ICKLLQLTHIDLRNNQLSDLPSE-MQNLTKLRSIILIYNR 501

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
             S P+   + +L  L+ + L   Q+ E  P+ +++L  L  LDL+ N L +IP      
Sbjct: 502 FKSFPD-VLYETL-SLETILLANNQVCEVDPSRLMKLTHLSTLDLANNDLLNIPPELGLC 559

Query: 521 TSLTELDLSDN 531
           T+L  L L  N
Sbjct: 560 TTLRCLSLEGN 570



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 160/339 (47%), Gaps = 50/339 (14%)

Query: 44  AVDLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           A  L++L + +N IE+L+ E L  L  +++L + +NK+  +P  I  L  L  LD++ N 
Sbjct: 260 APALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNND 319

Query: 103 IMKIPDEI------------GSATALVKFDCSSNQLKELPSSL-GRC------------- 136
           I  +P  +            G+    ++ D  S    EL   L GR              
Sbjct: 320 ITSLPASLSLLPNLNVLLLEGNPLRGIRRDILSKGTGELLKYLRGRVKEEPEKTDGGDTA 379

Query: 137 --------LNLSDFKA------SNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNL 179
                   +N+ D K       S+    S+PE+L D +    ++ ++   N+LT +   L
Sbjct: 380 MMLPSQARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSKNQLTSVPPRL 439

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +   + L+E+    N L      I  L +L  +DL  N++  +PS +     L    +  
Sbjct: 440 LEFQSSLSEINLGFNRLISCSPDICKLLQLTHIDLRNNQLSDLPSEMQNLTKLRSIILIY 499

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIG 295
           N   + P  L +   L T+ L +NQ+ E  V+  +L     LS LDL+NN L  +PPE+G
Sbjct: 500 NRFKSFPDVLYETLSLETILLANNQVCE--VDPSRLMKLTHLSTLDLANNDLLNIPPELG 557

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             TTLR L L GNP RT R+++V   T AL++YLRSR+P
Sbjct: 558 LCTTLRCLSLEGNPFRTPRAAIVAKGTDALMEYLRSRIP 596



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 187/426 (43%), Gaps = 86/426 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQK+ L HN +  L + L  L  + +L+ S N+L+E+PA++ E+  L+ L +  N + 
Sbjct: 194 VSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLR 253

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMS 163
            +P     A AL +    +NQ+++L +    CL+ +S  +  NN I  +PE++   S ++
Sbjct: 254 LLPKL--PAPALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLT 311

Query: 164 KLDV-----------------------EGNKLTVLSNNLIASWTMLTELIAS-KNLLNGM 199
           +LD+                       EGN L  +  ++++  T   EL+   +  +   
Sbjct: 312 RLDLTNNDITSLPASLSLLPNLNVLLLEGNPLRGIRRDILSKGT--GELLKYLRGRVKEE 369

Query: 200 PE------TIGSLSRLIRLDLHQNRIL-----------SIPSSISGCC---SLAEFYMGN 239
           PE      T   L    R+++H  + L           SIP  +       S+A      
Sbjct: 370 PEKTDGGDTAMMLPSQARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSK 429

Query: 240 NALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           N L+++P  L +  S L  ++L  N+L     + C+L +L+ +DL NN LS LP E+  +
Sbjct: 430 NQLTSVPPRLLEFQSSLSEINLGFNRLISCSPDICKLLQLTHIDLRNNQLSDLPSEMQNL 489

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           T LR ++L  N  ++    L                             + +++ T L  
Sbjct: 490 TKLRSIILIYNRFKSFPDVLY----------------------------ETLSLETILLA 521

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
            ++   ++       PS + +   ++ LDL+ N +  +PPEL  C +L+ L L  N  + 
Sbjct: 522 NNQVCEVD-------PSRLMKLTHLSTLDLANNDLLNIPPELGLCTTLRCLSLEGNPFRT 574

Query: 418 WPDAIL 423
              AI+
Sbjct: 575 PRAAIV 580



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 44/263 (16%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ LDL +N LS LP  +G++  L++L L+ N L +L   +        L+ LRS     
Sbjct: 104 LTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCT------LENLRS----- 152

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                    L+L+   L  +P ++ +   +T+LD+S N ++ LP
Sbjct: 153 -------------------------LTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLP 187

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
                  SLQ + L  N++   PD+ L  L+++  L   +N L ++P+    ++  L+ L
Sbjct: 188 SSFGCLVSLQKVNLCHNQLSGLPDS-LARLTNVKLLDCSDNQLTEIPA-SLSEMLALEQL 245

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 514
            L +N +  LP+ P     P L+ELY+   Q+ +  T+ L  L  + +L+L  N ++ +P
Sbjct: 246 YLRHNKLRLLPKLPA----PALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVP 301

Query: 515 EGFKNLTSLTELDLSDNNISALP 537
           E    L++LT LDL++N+I++LP
Sbjct: 302 EEITLLSTLTRLDLTNNDITSLP 324



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 12/186 (6%)

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T+L ++S +++L   ++  +P        +T LDL  N +  LP  L    +LQ L LS 
Sbjct: 82  TKLLLSSNQITLLSDDIRLLPG-------LTTLDLHDNQLSSLPSALGELQNLQQLRLSH 134

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
           N++   P  + T L +L  L L  N L  +P D    +  L  LD+S N + SLP +  F
Sbjct: 135 NQLHSLPVEMCT-LENLRSLTLQQNLLENLPED-LGQLVNLTELDVSSNQLKSLPSS--F 190

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L  LQ++ L   QL   P  + RL  +++LD S N L  IP     + +L +L L  N
Sbjct: 191 GCLVSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHN 250

Query: 532 NISALP 537
            +  LP
Sbjct: 251 KLRLLP 256



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           RL++ + E + + ++  A     WE  ++TKL LS N I  L  ++     L TL L  N
Sbjct: 54  RLNIDTPEEAQQNVSFGA-ADRWWEQTDLTKLLLSSNQITLLSDDIRLLPGLTTLDLHDN 112

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFS 472
           ++   P A L  L +L  L+L +N L  +P +    +  L+ L L  N+  +LPE+    
Sbjct: 113 QLSSLPSA-LGELQNLQQLRLSHNQLHSLPVE-MCTLENLRSLTLQQNLLENLPED--LG 168

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L +L EL +   QL+  P+    L  L+ ++L  N L  +P+    LT++  LD SDN 
Sbjct: 169 QLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQ 228

Query: 533 ISALPPEL 540
           ++ +P  L
Sbjct: 229 LTEIPASL 236


>gi|303282505|ref|XP_003060544.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458015|gb|EEH55313.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 782

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 180/586 (30%), Positives = 278/586 (47%), Gaps = 91/586 (15%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           WWE  +L  L  + N I+ L + + +L  L  L+VSHN L+ LP    E   L+SLD S 
Sbjct: 159 WWERRELASLDASRNQIDSLPDRIASLTALEKLDVSHNVLTSLPGLALERLPLRSLDASG 218

Query: 101 NSIMKIPDEIGSATALVK--------FDCSSNQLKELP----SSLGRCLNLSD------- 141
           N I ++P  +   T   +        F     Q +  P    S L R   L D       
Sbjct: 219 NKIAELPLALPCETLARRRASWSSLFFRGVFFQTQLSPPLRKSHLHRASLLCDRRRNFAS 278

Query: 142 --FKASNNCITS--------------------LPEDLADCSKMSKLDVEGNKLTV----- 174
              K+S  C T+                    +P+ LA C ++  LD+ GN L       
Sbjct: 279 GVIKSSRRCRTTSARASGSRSSARRIAPSGARVPDSLARCHQLVSLDLSGNLLGAGLAPD 338

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L + L      + EL  S+N L+ +PE++G++ RL RLD  +N I  +P+S+ GC SLAE
Sbjct: 339 LPDALATGLVNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEIRELPASVEGCDSLAE 398

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
            Y+G+N L+ +P E+G ++ L TLD+ +N LKE       + LS+LD S N +  + PE+
Sbjct: 399 LYLGHNRLATIPDEIGFVASLRTLDVSNNALKELRPSLANVPLSLLDASGNDIVAVAPEL 458

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED----SEASTTK----- 345
           G+  TLRKL+L GNPL+++R +++ GPT  LL +LRS+L +  D    + A+  K     
Sbjct: 459 GRCVTLRKLMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDDVNAAAAAFGKVFIGA 518

Query: 346 EDLITMATRLSVTSKELSLEG---------MNLSAIPSEIWE--AGEITKLDLSRNSIQ- 393
           +D + +A+  +  +  ++ EG           +  +P E W+  A  +  +DL  N ++ 
Sbjct: 519 DDAVVIAS--ATHADRVAFEGGRGTLLLRDRGVERVPIEAWDIVATRVACVDLGLNGLKG 576

Query: 394 ----------ELPPELSSCASLQTLILSRNKIKDWP----DAILTSLSSLSCLKLDNNPL 439
                      L   +  C  L+TL+L  N +  WP    +A    L  +S   L NN  
Sbjct: 577 DACGGGSNSDALATAVGKCKRLETLLLDGNDLSSWPLPHDNAPPLPLLEMS---LANNAR 633

Query: 440 --RQVPSDG-FKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
               V + G F     +  LDLS  +  A   ++     L +L EL   R  L   P D+
Sbjct: 634 VGGAVQTRGVFSRASNMTRLDLSGVVIAARFVDDGLLGPLANLVELRWARGDLTRVPEDV 693

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             +++LR L L  N +  +      LT L ELDL++N++  LP EL
Sbjct: 694 YWMRKLRALALPDNRIGELRAEVSELTQLDELDLTNNDLPNLPAEL 739



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 180/446 (40%), Gaps = 84/446 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V++++L ++ N +  L E L  +  L  L+   N++ ELPA++     L  L +  N + 
Sbjct: 348 VNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEIRELPASVEGCDSLAELYLGHNRLA 407

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IPDEIG   +L   D S+N LKEL  SL   + LS   AS N I ++  +L  C  + K
Sbjct: 408 TIPDEIGFVASLRTLDVSNNALKELRPSLAN-VPLSLLDASGNDIVAVAPELGRCVTLRK 466

Query: 165 LDVEGNKLTVLSNNLIASWT------MLTELIASKNLLNGMPETIGSL------SRLIRL 212
           L +EGN L  +  N++A  T      + ++L   ++ +N      G +      + +I  
Sbjct: 467 LMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDDVNAAAAAFGKVFIGADDAVVIAS 526

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
             H +R+               F  G                 GTL L    ++   +EA
Sbjct: 527 ATHADRV--------------AFEGGR----------------GTLLLRDRGVERVPIEA 556

Query: 273 CQL---RLSVLDLSNNSLSG-----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             +   R++ +DL  N L G           L   +GK   L  LLL GN L +      
Sbjct: 557 WDIVATRVACVDLGLNGLKGDACGGGSNSDALATAVGKCKRLETLLLDGNDLSSWPLPHD 616

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMA---TRLSVTS---------------- 359
           N P    L  L   L  N     +     + + A   TRL ++                 
Sbjct: 617 NAPP---LPLLEMSLANNARVGGAVQTRGVFSRASNMTRLDLSGVVIAARFVDDGLLGPL 673

Query: 360 ---KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
               EL     +L+ +P +++   ++  L L  N I EL  E+S    L  L L+ N + 
Sbjct: 674 ANLVELRWARGDLTRVPEDVYWMRKLRALALPDNRIGELRAEVSELTQLDELDLTNNDLP 733

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQV 442
           + P  +   L  L  LK++ N LR +
Sbjct: 734 NLPAEL--GLVPLRALKVEGNMLRMI 757



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 29/318 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE-------LPAAIGELHMLKSLD 97
           V L+KL+L  N ++ ++ ++   P   +L    +KLS+         AA G++ +     
Sbjct: 462 VTLRKLMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDDVNAAAAAFGKVFIGADDA 521

Query: 98  VSFNSIM---KIPDEIGSATALVK---FDCSSNQLKELPSSLGRCLNLS------DFKAS 145
           V   S     ++  E G  T L++    +    +  ++ ++   C++L       D    
Sbjct: 522 VVIASATHADRVAFEGGRGTLLLRDRGVERVPIEAWDIVATRVACVDLGLNGLKGDACGG 581

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTV--LSNNLIASWTMLTELIASKNLLNGMPETI 203
            +   +L   +  C ++  L ++GN L+   L ++      +L   +A+   + G  +T 
Sbjct: 582 GSNSDALATAVGKCKRLETLLLDGNDLSSWPLPHDNAPPLPLLEMSLANNARVGGAVQTR 641

Query: 204 GSLSR---LIRLDLHQNRILS--IPSSISG-CCSLAEFYMGNNALSALPAELGKLSKLGT 257
           G  SR   + RLDL    I +  +   + G   +L E       L+ +P ++  + KL  
Sbjct: 642 GVFSRASNMTRLDLSGVVIAARFVDDGLLGPLANLVELRWARGDLTRVPEDVYWMRKLRA 701

Query: 258 LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L  N++ E   E  +L +L  LDL+NN L  LP E+G +  LR L + GN LR +R  
Sbjct: 702 LALPDNRIGELRAEVSELTQLDELDLTNNDLPNLPAELG-LVPLRALKVEGNMLRMIRRP 760

Query: 317 LVNGPTPALLKYLRSRLP 334
           ++   T ALL+YLR +LP
Sbjct: 761 ILERGTQALLEYLREKLP 778



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 30/158 (18%)

Query: 391 SIQELPPELSSCASLQTLILSRNKIK-----DWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           S   +P  L+ C  L +L LS N +      D PDA+ T L ++  L +  N        
Sbjct: 307 SGARVPDSLARCHQLVSLDLSGNLLGAGLAPDLPDALATGLVNVRELNVSRN-------- 358

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                           ++SLPE+    ++  L  L  R  ++RE P  +     L  L L
Sbjct: 359 ---------------RLSSLPES--LGAMRRLARLDCRENEIRELPASVEGCDSLAELYL 401

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             N L +IP+    + SL  LD+S+N +  L P L +V
Sbjct: 402 GHNRLATIPDEIGFVASLRTLDVSNNALKELRPSLANV 439


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 174/494 (35%), Positives = 257/494 (52%), Gaps = 23/494 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  L  ++  L  LT+L + H++L+ LPA IG+L  L  LD+S+N +  +
Sbjct: 21  LKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASLVELDLSYNQLTSL 80

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LVK D ++  L+E P SL   L+  +    NN +TSLP ++   + + +L+
Sbjct: 81  PAEIGQLTSLVKLDLTT-WLEE-PPSLLEELDSWELNLGNNRLTSLPAEIGQLTSLVELN 138

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSS 225
           +E NKLT L    I     L EL    N L  +P  IG L+ L+ L+L  N  L+ +P+ 
Sbjct: 139 LEHNKLTELPAE-IGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLTELPAE 197

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    SL E  + NN L++LPAE+G+L+ L  L LH NQL     E  QL  L  L+L  
Sbjct: 198 IGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHR 257

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EIG++T+L++L L  N L +L         PA +  L S +  +  +   T+
Sbjct: 258 NQLTSVPAEIGQLTSLKRLFLHRNQLTSL---------PAEIGQLTSLVKLDLTTNKLTS 308

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L    +EL L G  L ++P+EI +   +T LDL  N +  +P E+    S
Sbjct: 309 LPAEIGQLESL----RELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTS 364

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L L  N +   P  I   L+SL  L L  N L  +P++    +  L++L L  N + 
Sbjct: 365 LVELNLGGNHLTSMPAEI-GQLASLKRLFLHRNQLTSMPAE-IGQLTSLEMLHLGGNQLM 422

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           S+P       L  L+ L L R QL   P +I +L  L +L L  N L S+P     LTSL
Sbjct: 423 SVPAEA--GQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSL 480

Query: 524 TELDLSDNNISALP 537
             L L  N +++LP
Sbjct: 481 WTLHLGGNQLTSLP 494



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 164/476 (34%), Positives = 246/476 (51%), Gaps = 33/476 (6%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +N+  N+L+ LPA IG+L  LK L +  N +  +P EIG  T+L       ++L  LP+ 
Sbjct: 1   MNLICNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAE 60

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN-----NLIASWTMLT 187
           +G+  +L +   S N +TSLP ++   + + KLD+     T L         + SW    
Sbjct: 61  IGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLT----TWLEEPPSLLEELDSW---- 112

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL    N L  +P  IG L+ L+ L+L  N++  +P+ I    SL E  +GNN L++LPA
Sbjct: 113 ELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPA 172

Query: 248 ELGKLSKLGTLDLHSNQ-LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           E+G+L+ L  L+L  N  L E   E  QL  L  L+L NN L+ LP EIG++T+L++L L
Sbjct: 173 EIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFL 232

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L +L         PA +  L S +  N      T+    I   T L    K L L 
Sbjct: 233 HRNQLTSL---------PAEIGQLASLVELNLHRNQLTSVPAEIGQLTSL----KRLFLH 279

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L+++P+EI +   + KLDL+ N +  LP E+    SL+ L LS N+++  P  I   
Sbjct: 280 RNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEI-GQ 338

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
           L+SL+ L L NN L  +P++    +  L  L+L  N + S+P       L  L+ L+L R
Sbjct: 339 LTSLTLLDLGNNQLTSMPAE-IGQLTSLVELNLGGNHLTSMPAE--IGQLASLKRLFLHR 395

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QL   P +I +L  L +L L  N L S+P     LTSL  L L  N ++++P E+
Sbjct: 396 NQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEI 451



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 209/392 (53%), Gaps = 13/392 (3%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +D  +L L +N +  L  ++  L  L  LN+ HNKL+ELPA IG+L  L  L++  N 
Sbjct: 107 EELDSWELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNR 166

Query: 103 IMKIPDEIGSATALVKFDCSSNQ-LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           +  +P EIG  T+LV+ +   N  L ELP+ +G+  +L +    NN +TSLP ++   + 
Sbjct: 167 LTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTS 226

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L +  N+LT L    I     L EL   +N L  +P  IG L+ L RL LH+N++ S
Sbjct: 227 LKRLFLHRNQLTSLPAE-IGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTS 285

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL +  +  N L++LPAE+G+L  L  L L  NQL+    E  QL  L++L
Sbjct: 286 LPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLL 345

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DL NN L+ +P EIG++T+L +L L GN L ++ + +    +   L   R++L       
Sbjct: 346 DLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEI 405

Query: 341 ASTTKEDLITMATR--LSVTS--------KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
              T  +++ +     +SV +        K L L+   L+++P+EI +   +  L L  N
Sbjct: 406 GQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGN 465

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +  +P E+    SL TL L  N++   P AI
Sbjct: 466 QLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAI 497



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 15/305 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL N  L  +P E+              +   L++L L  N +  L  ++  L  L  L
Sbjct: 207 LNLCNNRLTSLPAEI-------------GQLTSLKRLFLHRNQLTSLPAEIGQLASLVEL 253

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ +PA IG+L  LK L +  N +  +P EIG  T+LVK D ++N+L  LP+ +
Sbjct: 254 NLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEI 313

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L + + S N + S+P ++   + ++ LD+  N+LT +    I   T L EL    
Sbjct: 314 GQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAE-IGQLTSLVELNLGG 372

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  MP  IG L+ L RL LH+N++ S+P+ I    SL   ++G N L ++PAE G+L+
Sbjct: 373 NHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLT 432

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L +L L  N L+ +P EIG++T+L  L L GN L +
Sbjct: 433 SLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTS 492

Query: 313 LRSSL 317
           L +++
Sbjct: 493 LPAAI 497



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 185/385 (48%), Gaps = 52/385 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           LNL N  L  +P E+              +   L +L L  N  + +L  ++  L  L  
Sbjct: 160 LNLGNNRLTSLPAEI-------------GQLTSLVELNLDDNTPLTELPAEIGQLTSLRE 206

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ LPA IG+L  LK L +  N +  +P EIG   +LV+ +   NQL  +P+ 
Sbjct: 207 LNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAE 266

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L       N +TSLP ++   + + KLD+  NKLT L    I     L EL  S
Sbjct: 267 IGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAE-IGQLESLRELRLS 325

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  LDL  N++ S+P+ I    SL E  +G N L+++PAE+G+L
Sbjct: 326 GNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQL 385

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L LH NQL     E  QL  L +L L  N L  +P E G++T+L++LLL  N L 
Sbjct: 386 ASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLT 445

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++         PA +  L S                            + L L G  L++
Sbjct: 446 SV---------PAEIGQLTSL---------------------------EMLHLGGNQLTS 469

Query: 372 IPSEIWEAGEITKLDLSRNSIQELP 396
           +P+EI +   +  L L  N +  LP
Sbjct: 470 VPAEIGQLTSLWTLHLGGNQLTSLP 494



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +P E+              +   L++L L  N +  +  ++  L  L +L
Sbjct: 368 LNLGGNHLTSMPAEI-------------GQLASLKRLFLHRNQLTSMPAEIGQLTSLEML 414

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  +PA  G+L  LK L +  N +  +P EIG  T+L       NQL  +P+ +
Sbjct: 415 HLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEI 474

Query: 134 GRCLNLSDFKASNNCITSLPEDL-----ADCS 160
           G+  +L       N +TSLP  +     ADCS
Sbjct: 475 GQLTSLWTLHLGGNQLTSLPAAIRDLGAADCS 506


>gi|209156068|gb|ACI34266.1| Leucine-rich repeat-containing protein 40 [Salmo salar]
          Length = 447

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/420 (34%), Positives = 224/420 (53%), Gaps = 25/420 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LK AR SG LNLS R L +VP  V++ N D   EA      G  D+WW+  DL KL+L 
Sbjct: 30  LLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLP 89

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E L ED++ LP LTVL+V  N+L+ LP +IGEL  L+ L +S N + ++P E+ S 
Sbjct: 90  SNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSL 149

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  +G   NL D   SNN +T++P+ L + + + KL++  NKL 
Sbjct: 150 KNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLK 209

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L +  I+    L  L  + N L  +P  +  ++ L +L L  N++  +P   S    L 
Sbjct: 210 SLPSG-ISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L AE L  LS L  L+L  N++K    E   L+ L  LDL NN +S LP
Sbjct: 267 ELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L+ L L GNPLR +R  L+   T  LLKYLR R+ E+ D +     +  +T+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTL 385

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSC 402
            ++  +      T K L      ++ +P ++++A     +  ++ S+N +  +PP   +C
Sbjct: 386 PSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRYLAC 445



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 203/479 (42%), Gaps = 83/479 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   L+E+P ++  L++    +   N      D     T L K    SN+L+     
Sbjct: 40  LNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLPSNKLE----- 94

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                             +L ED+     ++ LDV  N+LT L  + I     L +L  S
Sbjct: 95  ------------------ALSEDVKLLPALTVLDVHDNQLTSLPTS-IGELQHLQKLSLS 135

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ + SL  L  L L QN +  +P  +    +L +  + NN L+A+P  LG L
Sbjct: 136 HNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNL 195

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L+L  N+LK        ++ L +LD ++N L  +PP + +M +L +L L  N   
Sbjct: 196 NHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNK-- 253

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                         L++L   LP                 ++RL    KEL +    +  
Sbjct: 254 --------------LRFL-PELP-----------------SSRL----KELHVGNNQIEV 277

Query: 372 IPSE-IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           + +E +     ++ L+L  N ++ LP E+     L+ L L  N I   P A L  L  L 
Sbjct: 278 LEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLP-AALALLPKLK 336

Query: 431 CLKLDNNPLRQVPSD----GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
            L L+ NPLR +  D    G  ++       L Y    + E+P          + L    
Sbjct: 337 ILTLEGNPLRGIRRDLLTKGTNEL-------LKYLRGRIKEDPDGKGDEPDTAMTLPS-- 387

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTS--LTELDLSDNNISALPPELVS 542
             +A  ++  ++ L+ILD S+  +  +P+  F  + S  +  ++ S N ++A+PP  ++
Sbjct: 388 --QAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRYLA 444



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 42/336 (12%)

Query: 231 SLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS- 288
           S A F       +A+P  L K + K G L+L    L E      +L L   + +  +LS 
Sbjct: 12  SRAGFRTEKEEPAAVPYGLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF 71

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
           G        T L KLLL  N L  L   +   P   +L      + +N+ +   T+  +L
Sbjct: 72  GADDRWWDQTDLTKLLLPSNKLEALSEDVKLLPALTVLD-----VHDNQLTSLPTSIGEL 126

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             +        ++LSL    L  +P E+W    +T L L +N ++ LP  +    +L  +
Sbjct: 127 QHL--------QKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDI 178

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   PD+ L +L+ L  L L +N L+ +PS G   +  L++LD ++N + S+P 
Sbjct: 179 DLSNNQLTAVPDS-LGNLNHLVKLNLSHNKLKSLPS-GISVMKNLRLLDCTHNQLESIP- 235

Query: 468 NPPFSSLPHLQELYLRRMQLR---EAPTDILR-------------------LQQLRILDL 505
            P  S +  L++LYLR  +LR   E P+  L+                   L  L +L+L
Sbjct: 236 -PVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLEL 294

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             N ++++PE  + L  L  LDL +N+IS+LP  L 
Sbjct: 295 RDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALA 330


>gi|395822105|ref|XP_003784364.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40 [Otolemur garnettii]
          Length = 600

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 183/562 (32%), Positives = 287/562 (51%), Gaps = 58/562 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLTFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP AIGEL  L+ L+VS N +  +P EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLASLPPAIGELENLQKLNVSHNKLKILPGEIANL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  +L D  +   C     E    C  M           
Sbjct: 151 RNLKGLYLQHNELSCISEGFEQLSSLEDLHSRRGCYPFTGESTCVCDYMIA--------- 201

Query: 174 VLSNNLIAS-WTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                 +AS W++ L  L  S NLL  +P  +  +  L  + L +N++  +P     C  
Sbjct: 202 ------VASLWSLGLKHLDCSSNLLEAIPPELAGMESLELVYLWRNKLRFLP-EFPSCRL 254

Query: 232 LAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           L E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S 
Sbjct: 255 LKELHIGENQIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 314

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +
Sbjct: 315 LPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAM 373

Query: 350 TM--ATRLS----VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELS 400
           T+   +R++    VT K L        +IP E+++A +   IT ++ S+N + ++P  + 
Sbjct: 374 TLPSESRVNVHAIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPKRII 433

Query: 401 SCASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               + + + LS NK+  +    L  L  L+ L L            +  IP+L   + +
Sbjct: 434 ELKEMVSDVNLSFNKLS-FVSLELCMLQKLTFLDLR-----------YLLIPLLAFXN-N 480

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFK 518
           YN+ SL E    +SL     L L   + +  P  + R+  L  + +S N + S+ P+  K
Sbjct: 481 YNL-SLSEQE--TSLSKSVTLSLNINRFKVLPEVLYRILTLETVLISNNQIGSVDPQKMK 537

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            + +LT LDL +N++  +PPEL
Sbjct: 538 TMENLTTLDLQNNDLLHIPPEL 559



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 73/353 (20%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE LK E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 255 LKELHIGENQIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 314

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D  +     
Sbjct: 315 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMT 374

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+    S+P+++ D  K   ++ ++   N+L  +   +I 
Sbjct: 375 LPSESRVNVHAIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPKRIIE 434

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP----------------SS 225
              M++++  S N L+ +   +  L +L  LDL   R L IP                +S
Sbjct: 435 LKEMVSDVNLSFNKLSFVSLELCMLQKLTFLDL---RYLLIPLLAFXNNYNLSLSEQETS 491

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLD 281
           +S   +L+   +  N    LP  L ++  L T+ + +NQ+    V+  +++    L+ LD
Sbjct: 492 LSKSVTLS---LNINRFKVLPEVLYRILTLETVLISNNQIGS--VDPQKMKTMENLTTLD 546

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 547 LQNNDLLHIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 599



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 172/403 (42%), Gaps = 46/403 (11%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W ++ L+ L  + N +E +  +L  +  L ++ +  NKL  LP       +LK L +  N
Sbjct: 206 W-SLGLKHLDCSSNLLEAIPPELAGMESLELVYLWRNKLRFLPE-FPSCRLLKELHIGEN 263

Query: 102 SIMKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
            I  +  E +    +++  D   N+LK +P  +    +L     SNN I+SLP  L +  
Sbjct: 264 QIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL- 322

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNG------MPETIGSLSRLIRLD 213
            +  L +EGN L  +   +I   T  + + + SK   +G      + ET  +L    R++
Sbjct: 323 HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVN 382

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK---LGTLDLHSNQLKEYCV 270
           +H               +L      +    ++P E+    K   + T++   NQL +   
Sbjct: 383 VH------------AIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPK 430

Query: 271 EACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
              +L+  +S ++LS N LS +  E+  +  L  L         LR  L+  P  A    
Sbjct: 431 RIIELKEMVSDVNLSFNKLSFVSLELCMLQKLTFL--------DLRYLLI--PLLAFXNN 480

Query: 329 LRSRLPENEDS--EASTTKEDLITMATRLSVTSKELSLEGMNLS------AIPSEIWEAG 380
               L E E S  ++ T   ++        V  + L+LE + +S        P ++    
Sbjct: 481 YNLSLSEQETSLSKSVTLSLNINRFKVLPEVLYRILTLETVLISNNQIGSVDPQKMKTME 540

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            +T LDL  N +  +PPEL +C +L+TL+L  N  +    AIL
Sbjct: 541 NLTTLDLQNNDLLHIPPELGNCVNLRTLLLDGNPFRVPRAAIL 583



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 62/220 (28%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S +L+L G NLS +P  +W                ++P E +     Q L     + + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN------------VDIPEEAN-----QNLTFGATE-RWW 79

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
               LT L       + NN L+ + +D  + +P L +LD+  N +ASLP  P    L +L
Sbjct: 80  EQTDLTKLI------ISNNKLQSL-TDDLRLLPALTVLDIHDNQLASLP--PAIGELENL 130

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL----------- 526
           Q+L +   +L+  P +I  L+ L+ L L  N L  I EGF+ L+SL +L           
Sbjct: 131 QKLNVSHNKLKILPGEIANLRNLKGLYLQHNELSCISEGFEQLSSLEDLHSRRGCYPFTG 190

Query: 527 -----------------------DLSDNNISALPPELVSV 543
                                  D S N + A+PPEL  +
Sbjct: 191 ESTCVCDYMIAVASLWSLGLKHLDCSSNLLEAIPPELAGM 230


>gi|221117516|ref|XP_002157758.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Hydra
           magnipapillata]
          Length = 608

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 187/571 (32%), Positives = 288/571 (50%), Gaps = 61/571 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD------EAGEGD-KWWEAVDLQKLILAHN 55
           +LK+AR +G LNLS RSL++VP +V++ N D        GE D +WW+ VDL+KLILA N
Sbjct: 30  LLKSARHTGQLNLSGRSLKEVPLDVWRINLDIPSQTISLGEVDERWWDQVDLKKLILASN 89

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            I+ +  +++ LP L VL+   N +  L   I EL  L  L +S N +  +PD +  ATA
Sbjct: 90  EIKCIPNEVKYLPALNVLDAHDNCIEYLSDEISELKELGKLHLSHNKLTSLPDSLCQATA 149

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L     + N L+ LP + G  +NL +   S+N +TSLPE      ++ KLD+  N LT L
Sbjct: 150 LKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKLDLSKNLLTSL 209

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            N+   S   L  L  S N L  +P+  G L+ L   +   N +++  ++     ++ + 
Sbjct: 210 PNSF-DSLKSLINLNLSTNKLTVLPKGFGKLTSLEIFECSYN-LITTFTTFDDQTNIKQL 267

Query: 236 YMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
           ++G N +  +      K+  L +L L  N + E      +LR L   DLSNNSLS LP  
Sbjct: 268 FLGYNRIQKIEDNAFEKMQSLVSLSLRDNAISEIPESFTKLRTLERADLSNNSLSTLPNA 327

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-----------------N 336
           +GKM  L+ L L GN +R++R  +V+  T A+L YL+SRLPE                 N
Sbjct: 328 VGKM-NLKSLTLDGNSMRSIRRDIVDRGTNAILAYLKSRLPEEKVPDEEIKIPKSVSKVN 386

Query: 337 EDSEASTTKEDLITMATR-LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           ++ +    +E+   +  + L  T+K LS  G + S   S      +I+K+ +  N +   
Sbjct: 387 DNDQQKKIQENNKAVTDQFLIATTKNLSFSGGSGSIPSSFWLPGAQISKISIQHNGLTVY 446

Query: 396 PPELSSCAS-LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           P E+ + AS L  L +S NK+ +  D +              N L +           L 
Sbjct: 447 PLEIMNYASTLSELDISHNKLSNILDTV--------------NILTK-----------LV 481

Query: 455 ILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDLS+N+ +SLP +   S L HL E+ L   +    P  + + ++L+ L LS N +  I
Sbjct: 482 FLDLSHNVLSSLPSS--ISQLEHLLEVVLSFNKYSSIPPCLFKCKKLQTLLLSNNQITDI 539

Query: 514 P-EGFKNLTSLTELDLSDNNISALPPELVSV 543
              G   +  L  LDLS+NNI+ +PP+L +V
Sbjct: 540 DVVGLLEMKCLRTLDLSNNNIACVPPQLGNV 570



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 171/332 (51%), Gaps = 36/332 (10%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E + + +   L  L L  N I ++ E    L  L   ++S+N LS LP A+G+++ LKSL
Sbjct: 278 EDNAFEKMQSLVSLSLRDNAISEIPESFTKLRTLERADLSNNSLSTLPNAVGKMN-LKSL 336

Query: 97  DVSFNSIMKIPDEI---GSATALVKFDCSSNQLK------ELPSSLGRCLNLSD----FK 143
            +  NS+  I  +I   G+   L        + K      ++P S+ + +N +D     +
Sbjct: 337 TLDGNSMRSIRRDIVDRGTNAILAYLKSRLPEEKVPDEEIKIPKSVSK-VNDNDQQKKIQ 395

Query: 144 ASNNCIT-----SLPEDLADC--------------SKMSKLDVEGNKLTVLSNNLIASWT 184
            +N  +T     +  ++L+                +++SK+ ++ N LTV    ++   +
Sbjct: 396 ENNKAVTDQFLIATTKNLSFSGGSGSIPSSFWLPGAQISKISIQHNGLTVYPLEIMNYAS 455

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L+EL  S N L+ + +T+  L++L+ LDL  N + S+PSSIS    L E  +  N  S+
Sbjct: 456 TLSELDISHNKLSNILDTVNILTKLVFLDLSHNVLSSLPSSISQLEHLLEVVLSFNKYSS 515

Query: 245 LPAELGKLSKLGTLDLHSNQLKEY-CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +P  L K  KL TL L +NQ+ +   V   +++ L  LDLSNN+++ +PP++G +  L+ 
Sbjct: 516 IPPCLFKCKKLQTLLLSNNQITDIDVVGLLEMKCLRTLDLSNNNIACVPPQLGNVEWLQS 575

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L L GNP R  R+ ++   T  LL YLR R+P
Sbjct: 576 LNLDGNPFRNPRAQILMKGTQNLLAYLRDRIP 607



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           LPE  + +       L+  A      + +L+L G +L  +P ++W       LD+   +I
Sbjct: 15  LPEQSEEKKVGVPTSLLKSARH----TGQLNLSGRSLKEVPLDVWRIN----LDIPSQTI 66

Query: 393 Q--ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
              E+         L+ LIL+ N+IK  P+ +                         K +
Sbjct: 67  SLGEVDERWWDQVDLKKLILASNEIKCIPNEV-------------------------KYL 101

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           P L +LD   N I  L +    S L  L +L+L   +L   P  + +   L++L L+ NS
Sbjct: 102 PALNVLDAHDNCIEYLSDE--ISELKELGKLHLSHNKLTSLPDSLCQATALKVLLLAGNS 159

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           LQS+P  F  L +L ELDLSDN +++LP    S+
Sbjct: 160 LQSLPVNFGFLINLEELDLSDNKLTSLPESFGSL 193


>gi|159464078|ref|XP_001690269.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158284257|gb|EDP10007.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 523

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 174/523 (33%), Positives = 265/523 (50%), Gaps = 44/523 (8%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDE--AGEGDKWWEAVDLQKLILAHNNIEKL 60
           + + +AR+SG+L L+ R L  VP+ VY N +E   G   KWWE  ++ K+ L+ N I  L
Sbjct: 11  KAIVSARSSGTLTLTGRGLTQVPSAVY-NLEEQLPGHDAKWWEVAEMYKVDLSRNAITSL 69

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  LT L+VSHN+L+ LP  +  L  LK LDVS N I ++P  + +  AL    
Sbjct: 70  PPELGVLTTLTHLDVSHNQLAALPETLSMLVGLKLLDVSNNRIEELPASLAALPALAALH 129

Query: 121 CSSNQLKELPSSLG--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
              N L  LP  +G  +   L+   A +N +  LP  L++ + ++KLD+ GN L  L   
Sbjct: 130 AGKNALSLLPPGVGGRQQPALALLSAPDNRLVELPPGLSEAASLTKLDLSGNALAELPGY 189

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           ++   + LT++  S+N L G +   +G L R+  L+L  NR+ S+P +++GC  L E ++
Sbjct: 190 ILPGLSSLTDVDLSRNRLRGELGREVGLLRRVRTLNLRDNRLTSLPPTVAGCSGLVELFL 249

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
           G N LS++P ELG  + L TL+L  N+L     E C+L+L +LDLSNN L  LPPE+G M
Sbjct: 250 GRNQLSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQLGLLDLSNNDLRSLPPELGSM 309

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           ++LR L L GNPL+++R  +     P L     +RLP                       
Sbjct: 310 SSLRSLPLDGNPLKSIRREV-----PLLPPEGLARLP----------------------- 341

Query: 358 TSKELSLEGMNLSAIPSEIWEA--GEITKLDLSRN-SIQELPP-ELSSCASLQTLILSR- 412
             + L L  M LSA P          + +L +  N  +++LPP    +C +L  L L+  
Sbjct: 342 GLRGLHLNAMGLSAWPLPALNGVLPNLHELQVCNNPPLRQLPPYPFMACPNLVRLELAGI 401

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
             +   P      L++L  L L    +   P +     P L++L+L+ N +  LP     
Sbjct: 402 PGVCTLPPGTFAVLTALEALDLSQTGIGIFPPE-LLQAPRLRLLNLASNRLEVLPAE--V 458

Query: 472 SSLPHLQELYLRRMQLREAPTDI-LRLQQLRILDLSQNSLQSI 513
           +++  L+EL L    L   P  + L    LR L L  N L+SI
Sbjct: 459 AAMARLEELNLANNNLATLPPQLGLLAPVLRSLGLEGNPLRSI 501



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 156/354 (44%), Gaps = 62/354 (17%)

Query: 43  EAVDLQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSF 100
           EA  L KL L+ N + +L    L  L  LT +++S N+L  EL   +G L  +++L++  
Sbjct: 169 EAASLTKLDLSGNALAELPGYILPGLSSLTDVDLSRNRLRGELGREVGLLRRVRTLNLRD 228

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC----------------------LN 138
           N +  +P  +   + LV+     NQL  +P  LG C                      L 
Sbjct: 229 NRLTSLPPTVAGCSGLVELFLGRNQLSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQ 288

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-IASWTMLTELIASKNL-L 196
           L     SNN + SLP +L   S +  L ++GN L  +   + +     L  L   + L L
Sbjct: 289 LGLLDLSNNDLRSLPPELGSMSSLRSLPLDGNPLKSIRREVPLLPPEGLARLPGLRGLHL 348

Query: 197 NGM-------PETIGSLSRLIRLDLHQNR---------ILSIP-------SSISGCCSLA 233
           N M       P   G L  L  L +  N           ++ P       + I G C+L 
Sbjct: 349 NAMGLSAWPLPALNGVLPNLHELQVCNNPPLRQLPPYPFMACPNLVRLELAGIPGVCTLP 408

Query: 234 -----------EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLD 281
                         +    +   P EL +  +L  L+L SN+L+    E A   RL  L+
Sbjct: 409 PGTFAVLTALEALDLSQTGIGIFPPELLQAPRLRLLNLASNRLEVLPAEVAAMARLEELN 468

Query: 282 LSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L+NN+L+ LPP++G +   LR L L GNPLR++R  ++   TPA+L YL+ R+P
Sbjct: 469 LANNNLATLPPQLGLLAPVLRSLGLEGNPLRSIRRPILERGTPAVLAYLKDRIP 522



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 185/423 (43%), Gaps = 77/423 (18%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + ++M K+D+  N +T L   L    T LT L  S N L  +PET+  L  L  LD+  N
Sbjct: 52  EVAEMYKVDLSRNAITSLPPEL-GVLTTLTHLDVSHNQLAALPETLSMLVGLKLLDVSNN 110

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
           RI  +P+S++   +LA  + G NALS LP  +G                       Q  L
Sbjct: 111 RIEELPASLAALPALAALHAGKNALSLLPPGVGGRQ--------------------QPAL 150

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL------RS 331
           ++L   +N L  LPP + +  +L KL L+GN L  L   ++ G     L  L      R+
Sbjct: 151 ALLSAPDNRLVELPPGLSEAASLTKLDLSGNALAELPGYILPG-----LSSLTDVDLSRN 205

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL      E    +              + L+L    L+++P  +     + +L L RN 
Sbjct: 206 RLRGELGREVGLLRR------------VRTLNLRDNRLTSLPPTVAGCSGLVELFLGRNQ 253

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAI---------------------LTSLSSLS 430
           +  +PPEL  CA L+TL L  NK+   P  +                     L S+SSL 
Sbjct: 254 LSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQLGLLDLSNNDLRSLPPELGSMSSLR 313

Query: 431 CLKLDNNPLRQV-------PSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYL 482
            L LD NPL+ +       P +G   +P L+ L L +  +++ P       LP+L EL +
Sbjct: 314 SLPLDGNPLKSIRREVPLLPPEGLARLPGLRGLHLNAMGLSAWPLPALNGVLPNLHELQV 373

Query: 483 -RRMQLRE-APTDILRLQQLRILDLSQ-NSLQSIPEG-FKNLTSLTELDLSDNNISALPP 538
                LR+  P   +    L  L+L+    + ++P G F  LT+L  LDLS   I   PP
Sbjct: 374 CNNPPLRQLPPYPFMACPNLVRLELAGIPGVCTLPPGTFAVLTALEALDLSQTGIGIFPP 433

Query: 539 ELV 541
           EL+
Sbjct: 434 ELL 436



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 125/267 (46%), Gaps = 19/267 (7%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           +DLS N+++ LPPE+G +TTL  L ++ N L  L  +L      ++L  L+     N   
Sbjct: 59  VDLSRNAITSLPPELGVLTTLTHLDVSHNQLAALPETL------SMLVGLKLLDVSNNRI 112

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW--EAGEITKLDLSRNSIQELPP 397
           E        +     L      LSL       +P  +   +   +  L    N + ELPP
Sbjct: 113 EELPASLAALPALAALHAGKNALSL-------LPPGVGGRQQPALALLSAPDNRLVELPP 165

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
            LS  ASL  L LS N + + P  IL  LSSL+ + L  N LR         +  ++ L+
Sbjct: 166 GLSEAASLTKLDLSGNALAELPGYILPGLSSLTDVDLSRNRLRGELGREVGLLRRVRTLN 225

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + SLP  P  +    L EL+L R QL   P ++     LR L+L  N L  IP  
Sbjct: 226 LRDNRLTSLP--PTVAGCSGLVELFLGRNQLSSVPPELGMCAGLRTLELRDNKLTGIPAE 283

Query: 517 FKNLTSLTELDLSDNNISALPPELVSV 543
              L  L  LDLS+N++ +LPPEL S+
Sbjct: 284 LCEL-QLGLLDLSNNDLRSLPPELGSM 309


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 173/509 (33%), Positives = 263/509 (51%), Gaps = 21/509 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++S N L+ LP  +G+L  L+ L+++   +  
Sbjct: 72  NLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  +G+  NL     +NN +T+LP ++     +  L
Sbjct: 132 LPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQML 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L    I     L EL  S N L  +P+ IG L  L RL+L+  ++ ++P  
Sbjct: 192 DLGNNQLTILPKE-IGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  LDL++
Sbjct: 251 IGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEA 341
           N L+ LP EI ++  L++L L  N L TL      L N  T  L+    + LP+ E  E 
Sbjct: 311 NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK-EIGEL 369

Query: 342 STTKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSI 392
              K  L  + T+L+   KE+    +L+ +N     L+ +P EI E   +  L+L  N +
Sbjct: 370 QNLK-TLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 428

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  +P +    +  
Sbjct: 429 TTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLGLHQNQLTTLPKE-IGQLQN 486

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  N L 
Sbjct: 487 LQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLT 544

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++P+    L SL  L L  N +S LP E+
Sbjct: 545 TLPKEVLRLQSLQVLALGSNRLSTLPKEI 573



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 250/495 (50%), Gaps = 26/495 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 164 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTI 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + + +S +L  LP  +G+  NL     S N +T+LP+++     + +L
Sbjct: 224 LPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  + N L  +P+ I  L  L  LDLH+N++ ++P  
Sbjct: 284 DLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +    L+ LP E+G+L  L TL+L   QL     E  +L+ L  L+L  
Sbjct: 343 IGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIV 402

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
             L+ LP EIG++  L+ L L  N L TL                   + E ++ E    
Sbjct: 403 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE----------------IGELQNLEILVL 446

Query: 345 KEDLITMATRLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           +E+ IT   +     + L   G++   L+ +P EI +   + +LDL +N +  LP E+  
Sbjct: 447 RENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ 506

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + +  LQ+L L  N
Sbjct: 507 LQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSN 564

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L + P+  + L
Sbjct: 565 RLSTLPKE--IGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 622

Query: 521 TSLTELDLSDNNISA 535
            +L EL L  N +S+
Sbjct: 623 KNLQELHLYLNPLSS 637



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 245/512 (47%), Gaps = 55/512 (10%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKED 63
           L L+N  L  +P E+   KN      G+        +  +  +LQ+L L++N +  L ++
Sbjct: 168 LFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKE 227

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   
Sbjct: 228 IGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQ 287

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +    
Sbjct: 288 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 347

Query: 184 TMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + T  LI ++  L  +P+ IG L  L  L+L   ++ ++P  I    +L    +    L
Sbjct: 348 NLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQL 405

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+
Sbjct: 406 TTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQ 465

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L TL         P  +  L++                            + 
Sbjct: 466 WLGLHQNQLTTL---------PKEIGQLQN---------------------------LQR 489

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   + +L L  N +  LP E+    +L+ L L  N++   P  
Sbjct: 490 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 549

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQEL 480
           +L  L SL  L L +N L  +P +    +  LQ+L L S  + +LP+      L +LQEL
Sbjct: 550 VL-RLQSLQVLALGSNRLSTLPKE-IGQLQNLQVLGLISNQLMTLPKE--IGQLQNLQEL 605

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
            L   QL   P +I +L+ L+ L L  N L S
Sbjct: 606 CLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 637



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 195/397 (49%), Gaps = 26/397 (6%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLQNLQRLDLSFNSLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L+  ++ ++P  I    +L    +  N L+ALP E+G+L  L  L L++NQL   
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L +LDL NN L+ LP EIG++  L++L L+ N L  L         P  + 
Sbjct: 179 PTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTIL---------PKEIG 229

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L +    N +S+  TT    I     L      L L   +L+ +P E+ +   + +LDL
Sbjct: 230 QLENLQRLNLNSQKLTTLPKEIGQLRNLQW----LDLSFNSLTTLPKEVGQLENLQRLDL 285

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N +  LP E+    +LQ L L+ NK+   P  I   L +L  L L  N L  +P    
Sbjct: 286 HQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLP---- 340

Query: 448 KDIPMLQILD----LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           K+I  LQ L     +   + +LP+      L +L+ L L   QL   P +I  LQ L+ L
Sbjct: 341 KEIGQLQNLKTLNLIVTQLTTLPKE--IGELQNLKTLNLIVTQLTTLPKEIGELQNLKTL 398

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L    L ++P+    L +L  L+L DN ++ LP E+
Sbjct: 399 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 435


>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 178/543 (32%), Positives = 278/543 (51%), Gaps = 28/543 (5%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG--------DKWWEAVDLQKLI 51
           M+ +LK AR SG LNL+NR L  VP++V++ N D   +         D+WWE V L +LI
Sbjct: 4   MEALLKQARASGQLNLANRQLEAVPDQVWRINLDAPAQAGAVSFDSEDRWWEQVGLARLI 63

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  L E L  LP LT+L+   NK++ +   +G+L  LK+L++  N +  +P  + 
Sbjct: 64  LSCNQLTTLPEQLELLPDLTLLDAHDNKITVISERLGQLAQLKALNLGQNCLENLPQSLY 123

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
              AL      +N L+ L  +L +   L +  AS+N +  LPE L D   +++L +  N+
Sbjct: 124 HLPALQSLKLDNNALRSLAPALRQLSELRELDASHNRLVELPESLCDLPHLARLRLGHNQ 183

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L          L EL    N L  +P  +GSLS + RLD+  N +  +P S++    
Sbjct: 184 LESLPAP-FGQLEALQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLP-SLASMTQ 241

Query: 232 LAEFYMGNNALSALPAELGKL--SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L E  +G N +  L  +LG L  + L  LD+  N++ +       LR L  L+LSNN +S
Sbjct: 242 LKELLVGYNQIHTL-GDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDIS 300

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKE 346
            LPPE+G + +++ + L GNPLR+LR  +V   T A+L++LRSRLPE    + EA    E
Sbjct: 301 SLPPELGLVRSIKAISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAE 360

Query: 347 DLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS- 404
            +     +  +  +  L+L    L  +PS+I++   + +  L +N +  LP ++   +S 
Sbjct: 361 QVAQRERQTDLAQTGALNLSNQGLDHVPSDIFQEA-VEQGTLQKNKLLHLPAQVDQLSST 419

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L L  N++     AI   L  L  L+L+ N L  +P +    +  LQ L L +N   
Sbjct: 420 LTHLDLGFNRLSTLSSAI-GLLPRLVSLELEGNALTSLPEE-LALLSELQDLGLGHNRFT 477

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDI-LRLQQLRILDLSQNSLQSIPE--GFKNL 520
           +LP+      L  LQ L L   Q+     D+ L    LR +DL  N++Q +P   G  NL
Sbjct: 478 ALPD--VVRHLRALQNLMLNDNQVSTVDPDVLLACPMLRCVDLHNNAIQQVPPRLGLLNL 535

Query: 521 TSL 523
            +L
Sbjct: 536 HTL 538



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 46/330 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPL-LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L++ +N I  L +    LP  L +L+V  NK++++PA I  L  L+ L++S N I  
Sbjct: 242 LKELLVGYNQIHTLGDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDISS 301

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA--------------------- 144
           +P E+G   ++       N L+ L   + R   L+  +                      
Sbjct: 302 LPPELGLVRSIKAISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAEQ 361

Query: 145 ------------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
                             SN  +  +P D+     + +  ++ NKL  L   +    + L
Sbjct: 362 VAQRERQTDLAQTGALNLSNQGLDHVPSDIFQ-EAVEQGTLQKNKLLHLPAQVDQLSSTL 420

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           T L    N L+ +   IG L RL+ L+L  N + S+P  ++    L +  +G+N  +ALP
Sbjct: 421 THLDLGFNRLSTLSSAIGLLPRLVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALP 480

Query: 247 AELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
             +  L  L  L L+ NQ+       + AC + L  +DL NN++  +PP +G +  L  L
Sbjct: 481 DVVRHLRALQNLMLNDNQVSTVDPDVLLACPM-LRCVDLHNNAIQQVPPRLG-LLNLHTL 538

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
            L GN  R  R ++++  T A+L+YL+SR+
Sbjct: 539 KLEGNLFRMPRQTILDKGTGAVLEYLKSRI 568



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 5/171 (2%)

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P ++    ++T LD   N I  +   L   A L+ L L +N +++ P + L  L 
Sbjct: 68  QLTTLPEQLELLPDLTLLDAHDNKITVISERLGQLAQLKALNLGQNCLENLPQS-LYHLP 126

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L  LKLDNN LR + +   + +  L+ LD S+N +  LPE+     LPHL  L L   Q
Sbjct: 127 ALQSLKLDNNALRSL-APALRQLSELRELDASHNRLVELPES--LCDLPHLARLRLGHNQ 183

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L   P    +L+ L+ LD+  N L S+P    +L+ +T LD+  N +  LP
Sbjct: 184 LESLPAPFGQLEALQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLP 234


>gi|350425451|ref|XP_003494125.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Bombus
           impatiens]
          Length = 602

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 177/564 (31%), Positives = 282/564 (50%), Gaps = 59/564 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR SG+LNLS+R L  VPN V+                 D   E ++WWE   LQ 
Sbjct: 30  IIISARKSGNLNLSSRGLFTVPNRVWNINDLTEEEIRDLHFELDYVQETERWWEQEPLQT 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++K+   + NL  LT L + +N+L +LPA IG L  L  L++S N + K P E
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLPAEIGNLKKLNILNLSNNKLEKFPHE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L + +  +N +KEL  ++G  + L+    S N +  LP  +    +++ LD+  
Sbjct: 150 FYKLNELRELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLSH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  ISGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTTFP-DISGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N L
Sbjct: 267 ILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKL 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLPENEDSEAS 342
           + +P  IG +  L++  + GN ++ +R+ ++   T  +LK++R     + L   E   A 
Sbjct: 327 TLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVAD 386

Query: 343 TTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           T+     D  TM      ++K LSL G NL+ +P E+ E                     
Sbjct: 387 TSTNIYPDRYTMQ-----STKLLSLAGQNLTELPQEVLE--------------------- 420

Query: 400 SSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           ++C A + T+ LSRNK+   PD  L  +  ++ LKL +N L  +P    +    LQILDL
Sbjct: 421 NACKADVGTVDLSRNKLSILPDK-LCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDL 479

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EG 516
           S N + SLP N     L +LQEL +   + +E P  +  +  L IL  + N +  I    
Sbjct: 480 SRNLLQSLPIN--LGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNLITDIDVPS 537

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
           F+ L  L  L+L++NNI  +PPEL
Sbjct: 538 FQKLQKLAILNLANNNIGFVPPEL 561



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 68/340 (20%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           D+    LL VL+++ N ++E+  +  E +  LK+L +  N I  IP+EI     L  FD 
Sbjct: 262 DISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDL 321

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS------------KMSKLDVEG 169
           S N+L  +P  +G   NL  F    N I ++  D+  C             K + LDV+ 
Sbjct: 322 SHNKLTLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKE 381

Query: 170 NKLTVLSNNLIAS-WTM------------LTELIA----------------SKNLLNGMP 200
           + +   S N+    +TM            LTEL                  S+N L+ +P
Sbjct: 382 HVVADTSTNIYPDRYTMQSTKLLSLAGQNLTELPQEVLENACKADVGTVDLSRNKLSILP 441

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLD 259
           + +  + R+  L L  N++  IP  I       +   +  N L +LP  LG L  L  L+
Sbjct: 442 DKLCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDLSRNLLQSLPINLGLLKYLQELN 501

Query: 260 LHSNQLKE-----YCVEACQL--------------------RLSVLDLSNNSLSGLPPEI 294
           +  N+ KE     Y + + ++                    +L++L+L+NN++  +PPE+
Sbjct: 502 ISFNRYKEIPESVYAINSLEILIANDNLITDIDVPSFQKLQKLAILNLANNNIGFVPPEL 561

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           G +  LR L L+GN  +  R +++   T  +L YLR+R+P
Sbjct: 562 GTLKNLRNLSLSGNCFKQPRQAILAKSTEEILAYLRNRIP 601



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 62/330 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  N +  I   I     L   Y+ NN L  LPAE+G L KL                
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLPAEIGNLKKL---------------- 133

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                 ++L+LSNN L   P E  K+  LR+L L  N ++ L         PA+  ++  
Sbjct: 134 ------NILNLSNNKLEKFPHEFYKLNELRELNLKNNSIKEL--------DPAVGDFV-- 177

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                              M T L ++         NL  +P  +     +T LDLS N 
Sbjct: 178 -------------------MLTYLDLSYN-------NLIELPIGMGYLVRLTSLDLSHNM 211

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ELPP+L++  +LQ L  S N+++  P   L  L  +  + L +N L   P        
Sbjct: 212 LKELPPDLTNMRALQKLNASYNQLEMLPP--LGELRKVETVMLQSNKLTTFPD--ISGCI 267

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +L++L L+ N  +  +      +  L+ L L   Q+   P +I++L  L I DLS N L 
Sbjct: 268 LLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLT 327

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELV 541
            IP+    L +L +  +  N+I  +  +++
Sbjct: 328 LIPKYIGLLPNLKQFAIDGNDIQNVRTDII 357



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WE   +  LDLS N+++++ P++ +   L TL L  N+++D P A + +L  L+ L L N
Sbjct: 82  WEQEPLQTLDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLP-AEIGNLKKLNILNLSN 140

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L + P + +K                         L  L+EL L+   ++E    +  
Sbjct: 141 NKLEKFPHEFYK-------------------------LNELRELNLKNNSIKELDPAVGD 175

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  LDLS N+L  +P G   L  LT LDLS N +  LPP+L ++
Sbjct: 176 FVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLSHNMLKELPPDLTNM 222


>gi|403339641|gb|EJY69086.1| hypothetical protein OXYTRI_10295 [Oxytricha trifallax]
          Length = 809

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 268/519 (51%), Gaps = 30/519 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK A+ +G+L +++R L+  P E+ K F E    + WW+  DLQK+ L++N I ++ E++
Sbjct: 30  LKRAKQNGTLIIADRQLKAFPGEILK-FSELQITENWWDTFDLQKIDLSNNEIPEIPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
                +   N+S+NK+  +P  +  L  LK LD+S+N I  +P+ I    ALV+F  + N
Sbjct: 89  SAQEFIAWFNISNNKIEIVPNGLLALKTLKFLDLSYNKIKILPEAIAMTEALVEFHVAGN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ELP S+G   NL       N +  LP +     ++ KLD+E N+LT + +N  +S T
Sbjct: 149 MLIELPRSIGDLKNLEILDIKKNKLQYLPIEFGCLPRILKLDLEDNQLTRV-DNFFSSLT 207

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            LT L  SKN +  + +  + +L+ L+ LD+HQN++ +  SS+     L    +  N + 
Sbjct: 208 TLTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRTF-SSVPNSFKLDSLALAYNFIE 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +   L + + L  LDLH+N+L+E+      L+ L  L +SNN+LS + P I  +  L +
Sbjct: 267 QI-QNLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNNLSDINPRISLLPVLVR 325

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           + + GNPL+ ++S++ N     L KYL+ RL + E       +E+   +  ++   SK+ 
Sbjct: 326 ITIEGNPLKCIKSTMRNAGADQLKKYLKMRLDDGE----VQIEENKQAVIKQIPGASKDF 381

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
                     P +I     I+  +LS N+  +LP ++    +L+ L + +N         
Sbjct: 382 D---------PWDILLREFISNTNLSENAFTDLPEDIILLKNLKQLRV-QNNKLKNLPLN 431

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFK----DIPMLQILDL-SYNIASLPENPPFSSLPHL 477
           L  + SL  ++  NN L +   D       ++P L  L L + NI  +P  P    LP L
Sbjct: 432 LLKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFLSLNANNITQVP--PILKYLPKL 489

Query: 478 QELYLRRMQLREAPTDILRLQ--QLRILDLSQNSLQSIP 514
           Q+L+L   ++ +   ++ R Q  QL +LDL  N L+ IP
Sbjct: 490 QQLHLHMNKISDV-KELCRKQFKQLEVLDLGNNKLREIP 527



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 64/357 (17%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           +  L  L LA+N IE++ ++L     L+VL++ +NKL E P +I +L  LK+L +S N++
Sbjct: 252 SFKLDSLALAYNFIEQI-QNLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNNL 310

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSS--------LGRCLNL---------------- 139
             I   I     LV+     N LK + S+        L + L +                
Sbjct: 311 SDINPRISLLPVLVRITIEGNPLKCIKSTMRNAGADQLKKYLKMRLDDGEVQIEENKQAV 370

Query: 140 --------SDFKA--------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                    DF                S N  T LPED+     + +L V+ NKL  L  
Sbjct: 371 IKQIPGASKDFDPWDILLREFISNTNLSENAFTDLPEDIILLKNLKQLRVQNNKLKNLPL 430

Query: 178 NLIASWTMLTELIASKNLLNGMPETIG----SLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           NL+   ++ +   A+  L+    ++I     +L  L  L L+ N I  +P  +     L 
Sbjct: 431 NLLKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFLSLNANNITQVPPILKYLPKLQ 490

Query: 234 EFYMGNNALSALPAEL--GKLSKLGTLDLHSNQLKE-------YCVEACQLRLSVLDLSN 284
           + ++  N +S +  EL   +  +L  LDL +N+L+E       YC     L L   D+S+
Sbjct: 491 QLHLHMNKISDV-KELCRKQFKQLEVLDLGNNKLREIPIALIHYCENLTLLNLQNNDISD 549

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
               G+P  IG    ++ + + GNPL+++R +++   T A+LKYLR +  E  DS+ 
Sbjct: 550 ---RGIPNLIGIHKNIKTIQIDGNPLKSIRRAIIEKGTEAILKYLRDKFVEERDSQV 603



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 35/308 (11%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           + +  L A P E+ K S+L        Q+ E   +   L+   +DLSNN +  +P EI  
Sbjct: 41  IADRQLKAFPGEILKFSEL--------QITENWWDTFDLQ--KIDLSNNEIPEIPEEISA 90

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
              +    ++ N +  + + L+   T   LK+L          + S  K  ++  A  ++
Sbjct: 91  QEFIAWFNISNNKIEIVPNGLLALKT---LKFL----------DLSYNKIKILPEAIAMT 137

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
               E  + G  L  +P  I +   +  LD+ +N +Q LP E      +  L L  N++ 
Sbjct: 138 EALVEFHVAGNMLIELPRSIGDLKNLEILDIKKNKLQYLPIEFGCLPRILKLDLEDNQLT 197

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFS 472
              D   +SL++L+ L L  N + Q+  D   ++  L  LD+  N     +S+P +    
Sbjct: 198 R-VDNFFSSLTTLTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRTFSSVPNSFKLD 256

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L   ++ ++Q      ++ R   L +LDL  N L+  PE   +L +L  L +S+NN
Sbjct: 257 SLA-LAYNFIEQIQ------NLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNN 309

Query: 533 ISALPPEL 540
           +S + P +
Sbjct: 310 LSDINPRI 317



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 194/469 (41%), Gaps = 79/469 (16%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            +  QLK  P   G  L  S+ +        + E+  D   + K+D+  N++  +    I
Sbjct: 41  IADRQLKAFP---GEILKFSELQ--------ITENWWDTFDLQKIDLSNNEIPEIPEE-I 88

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++   +     S N +  +P  + +L  L  LDL  N+I  +P +I+   +L EF++  N
Sbjct: 89  SAQEFIAWFNISNNKIEIVPNGLLALKTLKFLDLSYNKIKILPEAIAMTEALVEFHVAGN 148

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP  +G L  L  LD+  N+L+   +E  C  R+  LDL +N L+ +      +TT
Sbjct: 149 MLIELPRSIGDLKNLEILDIKKNKLQYLPIEFGCLPRILKLDLEDNQLTRVDNFFSSLTT 208

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L L+ N +  +    +   T  +   +         S  ++ K D + +A       
Sbjct: 209 LTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRTFSSVPNSFKLDSLALAYNFIEQI 268

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L                A  ++ LDL  N ++E P  +    +L+TL +S N + D  
Sbjct: 269 QNLD--------------RAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNNLSDIN 314

Query: 420 DAILTSLSSLSCLKLDNNPL-------RQVPSDGFKDIPMLQILDLSYNI---------- 462
             I + L  L  + ++ NPL       R   +D  K    +++ D    I          
Sbjct: 315 PRI-SLLPVLVRITIEGNPLKCIKSTMRNAGADQLKKYLKMRLDDGEVQIEENKQAVIKQ 373

Query: 463 ---------------------ASLPENPPFSSLP-------HLQELYLRRMQLREAPTDI 494
                                 +L EN  F+ LP       +L++L ++  +L+  P ++
Sbjct: 374 IPGASKDFDPWDILLREFISNTNLSENA-FTDLPEDIILLKNLKQLRVQNNKLKNLPLNL 432

Query: 495 LRLQQLRILDLSQNSL-----QSIPEGFKNLTSLTELDLSDNNISALPP 538
           L++Q L+ +  + N L      SI     NL +LT L L+ NNI+ +PP
Sbjct: 433 LKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFLSLNANNITQVPP 481


>gi|340727641|ref|XP_003402148.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40-like [Bombus terrestris]
          Length = 604

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 176/564 (31%), Positives = 283/564 (50%), Gaps = 59/564 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR SG+LNLS+R L  VPN V+                 D   E ++WWE   LQ 
Sbjct: 30  IIISARKSGNLNLSSRGLFTVPNRVWNINDLTEEEIRDLHFELDYVQETERWWEQEPLQT 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++K+   + NL  LT LN+ +N+L +LPA IG L  L  L++S N + K P E
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEKFPHE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L + +  +N +KEL  ++G  + L+    S N +  LP  +    +++ LD+  
Sbjct: 150 FYKLNELHELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLGH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  ISGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTTFP-DISGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N L
Sbjct: 267 ILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKL 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLPENEDSEAS 342
           + +P  IG +  L++ ++ GN ++ +R+ ++   T  +LK++R     + L   E   A 
Sbjct: 327 TLIPKYIGLLPNLKQFVIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVAD 386

Query: 343 TTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           T+     D  TM      ++K LSL G NL+ +P E+ E                     
Sbjct: 387 TSANIYPDRYTMQ-----STKLLSLAGQNLTELPLEVLE--------------------- 420

Query: 400 SSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           ++C A + T+ LSRNK+    D  L  +  ++ LKL +N L  +P    +    LQILDL
Sbjct: 421 NACKADVGTVDLSRNKLSILSDE-LCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDL 479

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EG 516
           S N + SLP N     L +LQEL +   + +E P  +  +  L IL  + N +  I    
Sbjct: 480 SRNLLQSLPIN--LGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNLITDIDVPS 537

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
           F+ +  L  L+L++NNI  +PPEL
Sbjct: 538 FQKIKKLAILNLANNNIGFVPPEL 561



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 156/313 (49%), Gaps = 27/313 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++SHNKL+ +P  IG L  LK   +  N I  +
Sbjct: 293 LKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTLIPKYIGLLPNLKQFVIDGNDIQNV 352

Query: 107 PDEI---GSATAL---------VKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC 148
             +I   G++  L            D   + + +  +++       +   L      N  
Sbjct: 353 RTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVADTSANIYPDRYTMQSTKLLSLAGQN-- 410

Query: 149 ITSLP-EDLADCSK--MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +T LP E L +  K  +  +D+  NKL++LS+ L      + +L  + N L  +PE IG 
Sbjct: 411 LTELPLEVLENACKADVGTVDLSRNKLSILSDEL-CIIERIADLKLTSNQLTHIPEWIGE 469

Query: 206 LSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
             + ++ LDL +N + S+P ++     L E  +  N    +P  +  ++ L  L  + N 
Sbjct: 470 KYKYLQILDLSRNLLQSLPINLGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNL 529

Query: 265 LKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           + +  V + Q   +L++L+L+NN++  +PPE+G +  LR L L+GN  +  R +++   T
Sbjct: 530 ITDIDVPSFQKIKKLAILNLANNNIGFVPPELGTLKNLRNLSLSGNCFKQPRQAILAKST 589

Query: 323 PALLKYLRSRLPE 335
             +L YLR+R+P+
Sbjct: 590 EEILAYLRNRIPQ 602



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 41/303 (13%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  +  ++  L++L TL+LH+NQL++   E   L+ L++L+LSNN L   P E  K+ 
Sbjct: 95  NTLKKIDPQIENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEKFPHEFYKLN 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L  N ++ L         PA+  ++                     M T L ++
Sbjct: 155 ELHELNLKNNSIKEL--------DPAVGDFV---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                    NL  +P  +     +T LDL  N ++ELPP+L++  +LQ L  S N+++  
Sbjct: 186 YN-------NLIELPIGMGYLVRLTSLDLGHNMLKELPPDLTNMRALQKLNASYNQLEML 238

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P   L  L  +  + L +N L   P        +L++L L+ N  +  +      +  L+
Sbjct: 239 PP--LGELRKVETVMLQSNKLTTFPD--ISGCILLRVLHLADNNITEIDMSCLEGVGQLK 294

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   Q+   P +I++L  L I DLS N L  IP+    L +L +  +  N+I  +  
Sbjct: 295 TLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTLIPKYIGLLPNLKQFVIDGNDIQNVRT 354

Query: 539 ELV 541
           +++
Sbjct: 355 DII 357



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 26/228 (11%)

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L   + R   ++++E S    ++I ++ R    S  L+L    L  +P+ +W        
Sbjct: 11  LAVFKKRTKNDDNAELS----EIIIISAR---KSGNLNLSSRGLFTVPNRVWNIN----- 58

Query: 386 DLSRNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           DL+   I++L  EL              LQTL LS N +K   D  + +L+ L+ L L N
Sbjct: 59  DLTEEEIRDLHFELDYVQETERWWEQEPLQTLDLSCNTLKKI-DPQIENLTELTTLNLHN 117

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L  +P++   ++  L IL+LS N +   P    F  L  L EL L+   ++E    + 
Sbjct: 118 NQLEDLPAE-IGNLKKLNILNLSNNKLEKFPH--EFYKLNELHELNLKNNSIKELDPAVG 174

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               L  LDLS N+L  +P G   L  LT LDL  N +  LPP+L ++
Sbjct: 175 DFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLGHNMLKELPPDLTNM 222


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 179/576 (31%), Positives = 278/576 (48%), Gaps = 66/576 (11%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+  +  AR + +L+L    LR +P  ++             +  +L  L ++ N++  L
Sbjct: 1   MEAKIATARQTFALDLQGFKLRALPKGLF-------------DLKELSALNVSSNDLTAL 47

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           ++++ R LP LT L ++ NKL+ LP+   G L  L+ LDV  N +  +P  +G  +ALV+
Sbjct: 48  EDEVVRLLPALTSLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVR 107

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
                N L++LP  +G   NL+    S N +  LP ++     +  LD++ N+L  L   
Sbjct: 108 LIAHCNLLEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPE 167

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC-SLAEFYM 237
                  LT+L  + NL +  PE+I  L  L  L++  NRI  +P +I+    S+ E  +
Sbjct: 168 F-GDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDL 226

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
             N     P  L     L TLD   N L +      QL  L+ L+LS+N L+ LP +IG+
Sbjct: 227 SGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGE 286

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MT L +L L+ N +  L   L  G    L K   SR               L T+   LS
Sbjct: 287 MTVLMELNLSKNKIAHLPPEL--GHLSFLGKLYLSR-------------NALATLPIELS 331

Query: 357 VTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
             +  +EL L    L  +P EI++  ++  L L  N++  LPPEL     LQ L +S N+
Sbjct: 332 NIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQ 391

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF--------------------------K 448
           +   P A ++ LS L  L +  N ++Q+P DG                            
Sbjct: 392 LTTLP-AEISQLSRLQVLSIYQNAIKQLP-DGMGALKHIESICLGDNLLDESGLAALEKA 449

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +P L+ L LS N + S+PE     +L  L+ELYL R ++ E P  I RL ++RI DLS 
Sbjct: 450 TMPALEQLVLSGNRLTSIPEG--LCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSD 507

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N++ ++P    +L SL E++LS N +S+LPPE V +
Sbjct: 508 NAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKL 543



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 191/465 (41%), Gaps = 109/465 (23%)

Query: 46  DLQKLI--LAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           DL  L+  +AH N+ E L   +  L  LTVL++S N L +LP  +G+LH LKSLD+  N 
Sbjct: 101 DLSALVRLIAHCNLLEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNR 160

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-----CLNLS----------------- 140
           +  +P E G   +L +  C++N     P S+ R      LN+S                 
Sbjct: 161 LKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDS 220

Query: 141 --DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------------- 179
             +   S N   + PE LA C  +  LD   N L  L++N+                   
Sbjct: 221 ITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTL 280

Query: 180 ---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I   T+L EL  SKN +  +P  +G LS L +L L +N + ++P  +S    + E  
Sbjct: 281 PRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALATLPIELSNIAFIQELD 340

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + NN L  LP E+ KL KL TL L  N L     E   L RL  L +SNN L+ LP EI 
Sbjct: 341 LSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEIS 400

Query: 296 K-------------------------------------------------MTTLRKLLLT 306
           +                                                 M  L +L+L+
Sbjct: 401 QLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVLS 460

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI-----TMATRLSVTS-- 359
           GN L ++   L N  +   L   R+ + E  ++     K  +       +A   S  S  
Sbjct: 461 GNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAIAALPSFISSL 520

Query: 360 ---KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
              +E++L    LS++P E  +   +  L L  N++ +LP +L +
Sbjct: 521 HSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQA 565



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 143/310 (46%), Gaps = 26/310 (8%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
            +LNLS+  L  +P ++              E   L +L L+ N I  L  +L +L  L 
Sbjct: 268 ATLNLSHNKLTTLPRQI-------------GEMTVLMELNLSKNKIAHLPPELGHLSFLG 314

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL--VKFDCSSNQLKEL 129
            L +S N L+ LP  +  +  ++ LD+S N +  +P EI     L  +K DC  N L  L
Sbjct: 315 KLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDC--NNLTHL 372

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-----IASWT 184
           P  LG    L     SNN +T+LP +++  S++  L +  N +  L + +     I S  
Sbjct: 373 PPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESIC 432

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +   L+    L      T+ +L +L+   L  NR+ SIP  +    SL E Y+  N ++ 
Sbjct: 433 LGDNLLDESGLAALEKATMPALEQLV---LSGNRLTSIPEGLCNLASLKELYLSRNEIAE 489

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP  + +L+K+   DL  N +         L  L  ++LS N LS LPPE  K+T L  L
Sbjct: 490 LPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVL 549

Query: 304 LLTGNPLRTL 313
            L  N L  L
Sbjct: 550 YLMHNNLTDL 559


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 244/500 (48%), Gaps = 43/500 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L LA+N ++ L +++  L  L  L +S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 62  NLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTT 121

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG+   L +    +NQL  LP  +G   +L +   +NN + +LP+++     +  L
Sbjct: 122 IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDL 181

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V  N+L  L    I +   L  L  + N L  +PE IG L  L  L++  N+++++P  
Sbjct: 182 NVFNNQLITLPQE-IGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQE 240

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    + NN L  LP E+G L KL  L L +NQL     E  +L RL  L L+N
Sbjct: 241 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTN 300

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIGK+  L++L+L  N L +    +  G  P L                   
Sbjct: 301 NQLKSLPQEIGKLQNLKELILENNRLESFPKEI--GTLPNL------------------- 339

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          + L LE    + +P EI     +  L+L  N +  LP E+     
Sbjct: 340 ---------------QRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLER 384

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L L  N++   P  I T L  L  L L NN L  +P +    +  L+ LDL YN +A
Sbjct: 385 LEWLNLYNNRLATLPKEIGT-LQKLQHLYLANNQLATLPKE-IGQLQNLKDLDLEYNQLA 442

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +LPE     +L  L+ L L+  QL   P +I  LQ++  L+L+ N L+++P+G   L SL
Sbjct: 443 TLPE--AIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSL 500

Query: 524 TELDLSDNNISALPPELVSV 543
            +LDLS N  +  P E+V +
Sbjct: 501 KDLDLSGNPFTTFPKEIVGL 520



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 37/416 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L L +N +  L +++  L  L  LN+++N+L  LP  IG L  L+ L+V  N ++ 
Sbjct: 131 DLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLIT 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L     + NQL  LP  +GR  NL D    NN + +LP+++     +  L
Sbjct: 191 LPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSL 250

Query: 166 DVEGNKLTVLSNNLIA----SWTMLTE------------------LIASKNLLNGMPETI 203
           ++E N+L  L   + A     W  LT                   L  + N L  +P+ I
Sbjct: 251 NLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEI 310

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  NR+ S P  I    +L   ++  N  + LP E+G L +L  L+L  N
Sbjct: 311 GKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHN 370

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L RL  L+L NN L+ LP EIG +  L+ L L  N L TL   +     
Sbjct: 371 QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEI----- 425

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L+ L+    + E ++ +T  E + T+  RL      LSL+   L+ +P EI    +I
Sbjct: 426 -GQLQNLKDL--DLEYNQLATLPEAIGTLQ-RLEW----LSLKNNQLTTLPEEIGTLQKI 477

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
            KL+L+ N ++ LP  +    SL+ L LS N    +P  I+  L  L  LKL N P
Sbjct: 478 VKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIV-GLKHLQILKLKNIP 532



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 204/421 (48%), Gaps = 34/421 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL+N  LR +P E+                  LQ L + +N +  L +++  L  L  
Sbjct: 157 ELNLANNQLRTLPKEIGT-------------LQHLQDLNVFNNQLITLPQEIGTLQNLKY 203

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +++N+L+ LP  IG L  L+ L+V  N ++ +P EIG+   L   +  +N+L  LP  
Sbjct: 204 LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKE 263

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L     +NN + +LP+++    ++  L +  N+L  L    I     L ELI  
Sbjct: 264 IGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQE-IGKLQNLKELILE 322

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L   P+ IG+L  L RL L  NR  ++P  I     L    + +N L+ LP E+G+L
Sbjct: 323 NNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRL 382

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L+L++N+L     E   L +L  L L+NN L+ LP EIG++  L+ L L  N L 
Sbjct: 383 ERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLA 442

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL  ++    T   L++L  +     +++ +T  E++ T+   +     +L+L    L  
Sbjct: 443 TLPEAI---GTLQRLEWLSLK-----NNQLTTLPEEIGTLQKIV-----KLNLANNQLRT 489

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I +   +  LDLS N     P E+     LQ L     K+K+ P A+L+   ++  
Sbjct: 490 LPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQIL-----KLKNIP-ALLSERETIRK 543

Query: 432 L 432
           L
Sbjct: 544 L 544



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 174/382 (45%), Gaps = 39/382 (10%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L   P  IG+L  L  L L  N++ ++P  I     L   Y+  N L+ LP E+GKL 
Sbjct: 48  NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQ 107

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L  NQL     E   L+ L  L L NN L  LP EIG +  L +L L  N LRT
Sbjct: 108 RLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRT 167

Query: 313 L----------------RSSLVNGP----TPALLKYLR------SRLPENED-----SEA 341
           L                 + L+  P    T   LKYLR      + LPE         + 
Sbjct: 168 LPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDL 227

Query: 342 STTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +     L+T+   +      + L+LE   L  +P EI    ++  L L+ N +  LP E+
Sbjct: 228 NVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEI 287

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
                L+ L L+ N++K  P  I   L +L  L L+NN L   P +    +P LQ L L 
Sbjct: 288 GKLQRLEWLGLTNNQLKSLPQEI-GKLQNLKELILENNRLESFPKE-IGTLPNLQRLHLE 345

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           YN   +LP+     +L  L  L L   QL   P +I RL++L  L+L  N L ++P+   
Sbjct: 346 YNRFTTLPQE--IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIG 403

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L  L  L L++N ++ LP E+
Sbjct: 404 TLQKLQHLYLANNQLATLPKEI 425


>gi|270015218|gb|EFA11666.1| hypothetical protein TcasGA2_TC008530 [Tribolium castaneum]
          Length = 621

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 177/589 (30%), Positives = 277/589 (47%), Gaps = 103/589 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV-------------YKNFDEAGEGDKWWEAV----- 45
           ++K  R +G LNLS RSL  VP ++             Y +F++  E + WW+       
Sbjct: 34  MIKIVRRTGQLNLSGRSLAHVPEKMFTMYELTEEDTAKYIDFNKEPEEENWWQFKPLNYL 93

Query: 46  ------------------DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
                             DL  L L  NNI  L  ++ NL  LT LN+SHNK++ LP   
Sbjct: 94  DLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLLPMEF 153

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L ++ N++ KI         L + D S N L +LP  +G  + L++   S+N
Sbjct: 154 YKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHN 213

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +  LP D+ +   + KLDV  N L  L                           +G L+
Sbjct: 214 KLIELPPDIVNLRGLLKLDVTHNDLVYLP-------------------------KMGELA 248

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLK 266
           +L  L    N I  IP    GC  L + Y GNN +  +  +  + +S L  LDL  N+++
Sbjct: 249 KLQFLYAQHNNIEEIPD-FEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIE 307

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +   E   L+ L  LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +
Sbjct: 308 QIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRI 367

Query: 326 LKYLRSRLPENEDSEA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAG 380
           LK+L+ +L ++ED E+    ST + +  T   + ++  S+ L++    L+++P +++E  
Sbjct: 368 LKHLKEQL-DDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEA 426

Query: 381 ---EITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
              E+T +DL +N +  +P  +   A +L  L LS N I + P+ I       +C+KL  
Sbjct: 427 KLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFIS------NCIKL-- 478

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
                            +  DL  N+ S LPE    SSL  L+EL L   +    P  + 
Sbjct: 479 -----------------KYFDLGNNLLSDLPE--CLSSLVGLRELVLSNNRFVHIPDCVY 519

Query: 496 RLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +  L IL  S N +  I  EG KNLT +  LDL++NN+S +PPEL +V
Sbjct: 520 SMVGLEILLASDNKITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNV 568



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 46/319 (14%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAA 86
           +Y   +   E   +     LQ++   +N I+++  D   N+  L +L++  NK+ ++P  
Sbjct: 253 LYAQHNNIEEIPDFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNE 312

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK--- 143
           I  L  L  LD++ N +  +P+ +G    L       N+LK++   + +   +   K   
Sbjct: 313 IAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLK 372

Query: 144 -------------------------------------ASNNCITSLPEDLADCSKMSKL- 165
                                                 +   +TS+P+D+ + +K++++ 
Sbjct: 373 EQLDDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVT 432

Query: 166 --DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
             D+  NKL  + N +      LTEL  S N ++ +PE I +  +L   DL  N +  +P
Sbjct: 433 IVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLSDLP 492

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLD 281
             +S    L E  + NN    +P  +  +  L  L    N++ +  VE  +   R++ LD
Sbjct: 493 ECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIATLD 552

Query: 282 LSNNSLSGLPPEIGKMTTL 300
           L+NN++S +PPE+G +T L
Sbjct: 553 LTNNNMSHIPPELGNVTQL 571



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 196/489 (40%), Gaps = 153/489 (31%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL--- 70
           LNLS+  +  +P E YK              V+LQ L LAHNN+EK+ ++  +L +L   
Sbjct: 139 LNLSHNKINLLPMEFYK-------------LVELQVLSLAHNNLEKISKNFADLVMLQQL 185

Query: 71  --------------------TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
                               T +N+SHNKL ELP  I  L  L  LDV+ N ++ +P ++
Sbjct: 186 DLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLP-KM 244

Query: 111 GSATALVKFDCSSNQLKELPSSLG--------------------RCLNLSDFKA------ 144
           G    L       N ++E+P   G                     C N+S+ K       
Sbjct: 245 GELAKLQFLYAQHNNIEEIPDFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDN 304

Query: 145 --------------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
                               +NN +T LP  L   + +  L +EGNKL  +  ++I   T
Sbjct: 305 KIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGT 364

Query: 185 M-----LTELIASKNLLNGMPETIGSLSRLIR----------------LDLHQNRILSIP 223
           M     L E +  ++L     E++  +S +                  L++   ++ S+P
Sbjct: 365 MRILKHLKEQLDDEDL-----ESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVP 419

Query: 224 SSISGCCSLAEFYMGN---NALSALPAELGKLSK-LGTLDLHSNQLKEY--CVEACQLRL 277
             +     LAE  + +   N L ++P  +  +++ L  L+L  N + E    +  C ++L
Sbjct: 420 DDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNC-IKL 478

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
              DL NN LS LP  +  +  LR+L+L+ N                       R     
Sbjct: 479 KYFDLGNNLLSDLPECLSSLVGLRELVLSNN-----------------------RFVHIP 515

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGM-NLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           D   S    + I +A+   +T  ++++EG+ NL+ I +          LDL+ N++  +P
Sbjct: 516 DCVYSMVGLE-ILLASDNKIT--DINVEGLKNLTRIAT----------LDLTNNNMSHIP 562

Query: 397 PELSSCASL 405
           PEL +   L
Sbjct: 563 PELGNVTQL 571



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 34/202 (16%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           + S SLN++ + L  VP++V   F+EA                       KL E      
Sbjct: 403 KHSRSLNVTMKQLTSVPDDV---FEEA-----------------------KLAE------ 430

Query: 69  LLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
            +T++++  NKL  +P  I  +   L  L++S N+I +IP+ I +   L  FD  +N L 
Sbjct: 431 -VTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLS 489

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +LP  L   + L +   SNN    +P+ +     +  L    NK+T ++   + + T + 
Sbjct: 490 DLPECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIA 549

Query: 188 ELIASKNLLNGMPETIGSLSRL 209
            L  + N ++ +P  +G++++L
Sbjct: 550 TLDLTNNNMSHIPPELGNVTQL 571


>gi|156551095|ref|XP_001603101.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Nasonia
           vitripennis]
          Length = 591

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 177/568 (31%), Positives = 278/568 (48%), Gaps = 62/568 (10%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVD 46
           MD +L  AR +G L LS+R+L  VP+ V+               +   +   +KWWE   
Sbjct: 15  MDIVL-TARKTGKLCLSSRALSSVPDRVWTINELTEEELKDLQVDLRNSDNQNKWWEYEP 73

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N++ KL ED++ L  L  L++  N L  LP  IG L  L+ L++S N +  +
Sbjct: 74  LKSLDLSSNSLTKLSEDVKYLGDLVNLDIHDNLLESLPEEIGSLTKLRKLNLSSNKLRTL 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +  S   L   D  SN +KEL  ++G  + L     S+N +TSLP  L    ++  LD
Sbjct: 134 PCKFFSLAELRCLDLKSNLIKELSPAIGDLVMLEYLNLSSNELTSLPAGLGYLVRLIALD 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  L  + + S   L +L  S N L  +   +G L ++ RLD H N + S P  +
Sbjct: 194 LNHNKLKELPPD-VMSMRALKKLDVSNNRLE-VVHPLGELRKIERLDFHMNNLSSFP-DV 250

Query: 227 SGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +GC SL E  + +N+++ +    L  L +L  L+L +N+++    E   L  +  LDLS 
Sbjct: 251 NGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDLSY 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSE--- 340
           N++S +P  +G M  L+   + GN +R +R  +V+  TP ++K+LR  + P N ++    
Sbjct: 311 NNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQTINPTNTETSNSP 370

Query: 341 ----ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQ 393
               ++ +  D  TM       +K LSL G NL+ +P E++E     E+T +DLSRN +Q
Sbjct: 371 LRVCSANSYPDKYTMR-----NAKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNKLQ 425

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            L   +S   S   L LS N + + P+ +  SL  L  L L  N L  +P+     + +L
Sbjct: 426 VLTDAMSKVTSTTDLKLSYNLLAELPEWLGESLERLRYLDLSKNLLTSLPA-SLSQLRLL 484

Query: 454 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
             +++S+N                        +  E P  I  +  L IL  + N +  I
Sbjct: 485 VEINISFN------------------------KFEEMPECIYEIAGLEILIANDNKMSCI 520

Query: 514 -PEGFKNLTSLTELDLSDNNISALPPEL 540
                 NL  L  LDLS+NNI  +PPEL
Sbjct: 521 NVPALSNLKRLAHLDLSNNNIGYVPPEL 548



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 173/336 (51%), Gaps = 51/336 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L L+HN+I ++  + L +L  L +LN+S+N++  +P  I  L  ++ LD+S+N+I +
Sbjct: 256 LHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDLSYNNISE 315

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRC------------LNLSDFKASNN----C- 148
           IP  +G    L  F    N+++ +   +  C            +N ++ + SN+    C 
Sbjct: 316 IPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQTINPTNTETSNSPLRVCS 375

Query: 149 ----------------------ITSLPEDLADCSKMSKL---DVEGNKLTVLSNNLIASW 183
                                 +  +P++L + +K +++   D+  NKL VL++ + +  
Sbjct: 376 ANSYPDKYTMRNAKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNKLQVLTDAM-SKV 434

Query: 184 TMLTELIASKNLLNGMPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
           T  T+L  S NLL  +PE +G SL RL  LDL +N + S+P+S+S    L E  +  N  
Sbjct: 435 TSTTDLKLSYNLLAELPEWLGESLERLRYLDLSKNLLTSLPASLSQLRLLVEINISFNKF 494

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
             +P  + +++ L  L  + N++   C+    L    RL+ LDLSNN++  +PPE+G + 
Sbjct: 495 EEMPECIYEIAGLEILIANDNKMS--CINVPALSNLKRLAHLDLSNNNIGYVPPELGNLK 552

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            LR L L+GN  +  R + +   T  +L YLR+R+P
Sbjct: 553 NLRMLSLSGNCFKQPRQATLMKGTEEILAYLRNRIP 588



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 204/478 (42%), Gaps = 96/478 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  LR +P              K++   +L+ L L  N I++L   + +L +L  L
Sbjct: 123 LNLSSNKLRTLPC-------------KFFSLAELRCLDLKSNLIKELSPAIGDLVMLEYL 169

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LPA +G L  L +LD++ N + ++P ++ S  AL K D S+N+L E+   L
Sbjct: 170 NLSSNELTSLPAGLGYLVRLIALDLNHNKLKELPPDVMSMRALKKLDVSNNRL-EVVHPL 228

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT------ 187
           G    +       N ++S P D+  C+ + +L +  N +T +  N + S   L       
Sbjct: 229 GELRKIERLDFHMNNLSSFP-DVNGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSN 287

Query: 188 -----------------ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC- 229
                            +L  S N ++ +P  +G +  L    +  N++ +I   I  C 
Sbjct: 288 NEIEVIPEEIIMLINVEQLDLSYNNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCG 347

Query: 230 --------------------------CSLAEF---YMGNNA---------LSALPAEL-- 249
                                     CS   +   Y   NA         L+ +P EL  
Sbjct: 348 TPRIMKHLRQTINPTNTETSNSPLRVCSANSYPDKYTMRNAKLLSLVGQNLAEVPDELFE 407

Query: 250 -GKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGK-MTTLRKLLLT 306
             K +++  +DL  N+L+       ++  +  L LS N L+ LP  +G+ +  LR L L+
Sbjct: 408 NAKEAEVTCVDLSRNKLQVLTDAMSKVTSTTDLKLSYNLLAELPEWLGESLERLRYLDLS 467

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L +L         PA L  LR  +  N   ++     E +  +A    + + +  + 
Sbjct: 468 KNLLTSL---------PASLSQLRLLVEINISFNKFEEMPECIYEIAGLEILIANDNKMS 518

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            +N+ A+ +       +  LDLS N+I  +PPEL +  +L+ L LS N  K    A L
Sbjct: 519 CINVPALSN----LKRLAHLDLSNNNIGYVPPELGNLKNLRMLSLSGNCFKQPRQATL 572



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 20/290 (6%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L +LDL SN L +   +   L  L  LD+ +N L  LP EIG +T LRKL L+ N LRTL
Sbjct: 74  LKSLDLSSNSLTKLSEDVKYLGDLVNLDIHDNLLESLPEEIGSLTKLRKLNLSSNKLRTL 133

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                +      L  LR   L  N   E S    DL+ M   L+++S EL+       ++
Sbjct: 134 PCKFFS------LAELRCLDLKSNLIKELSPAIGDLV-MLEYLNLSSNELT-------SL 179

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+ +     +  LDL+ N ++ELPP++ S  +L+ L +S N+++      L  L  +  L
Sbjct: 180 PAGLGYLVRLIALDLNHNKLKELPPDVMSMRALKKLDVSNNRLEVVHP--LGELRKIERL 237

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
               N L   P         L  L LS+N  +  +     SL  L+ L L   ++   P 
Sbjct: 238 DFHMNNLSSFPD--VNGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPE 295

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +I+ L  +  LDLS N++  IP     + +L    +  N +  +  ++VS
Sbjct: 296 EIIMLINVEQLDLSYNNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVS 345


>gi|189241927|ref|XP_968016.2| PREDICTED: similar to mitotic protein phosphatase 1 regulator,
           putative [Tribolium castaneum]
          Length = 594

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 175/577 (30%), Positives = 274/577 (47%), Gaps = 91/577 (15%)

Query: 4   ILKAARTSGSLNLSNRSL-RDVPNEVYKNFDEAGEGDKWWEAV----------------- 45
           ++K  R +G LNLS RSL  +     Y +F++  E + WW+                   
Sbjct: 34  MIKIVRRTGQLNLSGRSLAHEEDTAKYIDFNKEPEEENWWQFKPLNYLDLSSNVLQEIPG 93

Query: 46  ------DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                 DL  L L  NNI  L  ++ NL  LT LN+SHNK++ LP    +L  L+ L ++
Sbjct: 94  KIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLLPMEFYKLVELQVLSLA 153

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++ KI         L + D S N L +LP  +G  + L++   S+N +  LP D+ + 
Sbjct: 154 HNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIVNL 213

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             + KLDV  N L  L                           +G L++L  L    N I
Sbjct: 214 RGLLKLDVTHNDLVYLP-------------------------KMGELAKLQFLYAQHNNI 248

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-L 277
             IP    GC  L + Y GNN +  +  +  + +S L  LDL  N++++   E   L+ L
Sbjct: 249 EEIPD-FEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHL 307

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +LK+L+ +L ++E
Sbjct: 308 IRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQL-DDE 366

Query: 338 DSEA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAG---EITKLDLSR 389
           D E+    ST + +  T   + ++  S+ L++    L+++P +++E     E+T +DL +
Sbjct: 367 DLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDLCK 426

Query: 390 NSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
           N +  +P  +   A +L  L LS N I + P+ I       +C+KL              
Sbjct: 427 NKLPSVPNGIQLVAENLTELNLSMNAISEIPEFIS------NCIKL-------------- 466

Query: 449 DIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                +  DL  N+ S LPE    SSL  L+EL L   +    P  +  +  L IL  S 
Sbjct: 467 -----KYFDLGNNLLSDLPE--CLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASD 519

Query: 508 NSLQSI-PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N +  I  EG KNLT +  LDL++NN+S +PPEL +V
Sbjct: 520 NKITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNV 556



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 32/317 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N IE++  ++  L  L  L++++N L++LP ++G L  L++L +  N + K
Sbjct: 283 NLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKK 342

Query: 106 IPDEI--GSATALVKF--------DCSS--------NQLKELPSSL----GRCLNLSDFK 143
           I  +I  G    ++K         D  S        ++ K  P        R LN++  +
Sbjct: 343 IRGDIIKGGTMRILKHLKEQLDDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQ 402

Query: 144 ASNNCITSLPEDLADCSKMSKL---DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                +TS+P+D+ + +K++++   D+  NKL  + N +      LTEL  S N ++ +P
Sbjct: 403 -----LTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIP 457

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E I +  +L   DL  N +  +P  +S    L E  + NN    +P  +  +  L  L  
Sbjct: 458 EFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLA 517

Query: 261 HSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             N++ +  VE  +   R++ LDL+NN++S +PPE+G +T LR L L GN  R  R +++
Sbjct: 518 SDNKITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNVTQLRTLELRGNCFRQPRYAIL 577

Query: 319 NGPTPALLKYLRSRLPE 335
              T ++L YLR R+P+
Sbjct: 578 EQGTASVLSYLRDRIPK 594


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 164/469 (34%), Positives = 239/469 (50%), Gaps = 41/469 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++LQ+L L +N + +L E + +L  L  LN++ N L +LP  I  L  LK L++  N + 
Sbjct: 32  INLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLA 91

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDEIG  T L +   SSNQL  LP  +G    L +    +N +T LPE LA+ ++++ 
Sbjct: 92  DVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNW 151

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +E N LTVL    I S T+L EL   +N L  +PE++GSL RL +LDL  N++  +P 
Sbjct: 152 LSLETNHLTVLPET-IGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPE 210

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           SI     L E  + NN L++LP  +G L +L  L + +NQL         LR L  +DLS
Sbjct: 211 SIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLS 270

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L+ LP  IG +T L  L L+GN L+ L  S+      +L + L   L  N+ +E  T
Sbjct: 271 DNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESI-----GSLTQLLGLSLSNNQLTELPT 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
               L  + +        L L    L+ IP  I +  E+  L+LSRN + ELP  +    
Sbjct: 326 AICSLTDLES--------LRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLT 377

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
            L+T  LS N++ + P++I  +L  L  + LD+N L ++P                    
Sbjct: 378 ELETFYLSENQLTELPESI-GALIQLDWIFLDDNQLIKLPES------------------ 418

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
                  FSSL  L+ LYL   QL E P  I  L QL  + L+ N L S
Sbjct: 419 -------FSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPLNS 460



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 241/494 (48%), Gaps = 64/494 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             LQKL ++HN + +L E +  L  L  L++ +N+L+ELP AIG L  L+ L+++ N ++
Sbjct: 9   TQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELNLASNLLI 68

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P  I S T L + +   NQL ++P  +G    L +   S+N +T LPE +   +++ +
Sbjct: 69  KLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQE 128

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L  +L A+ T L  L    N L  +PETIGSL+ L  LDL +N++ S+P 
Sbjct: 129 LFLYSNQLTDLPESL-ANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPE 187

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           S+     L +  + +N L+ LP  +G LS+L           E C            L N
Sbjct: 188 SVGSLIRLKKLDLADNQLTHLPESIGSLSRL----------NELC------------LCN 225

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP  IG +  L++L +  N L  L         P  +  LR              
Sbjct: 226 NQLNSLPKSIGHLKQLKELCVCNNQLSNL---------PGSIGSLR-------------- 262

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                    RL    +++ L    L+ +P  I    ++  LDLS N ++ LP  + S   
Sbjct: 263 ---------RL----RKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQ 309

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L LS N++ + P AI  SL+ L  L+L +N L ++P +   D+  L+ L+LS N + 
Sbjct: 310 LLGLSLSNNQLTELPTAI-CSLTDLESLRLSDNQLTEIP-ESISDLTELEWLNLSRNQLT 367

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LP       L  L+  YL   QL E P  I  L QL  + L  N L  +PE F +L  L
Sbjct: 368 ELP--AAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQL 425

Query: 524 TELDLSDNNISALP 537
             L L +N ++ LP
Sbjct: 426 RRLYLENNQLTELP 439



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 212/456 (46%), Gaps = 64/456 (14%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P +IG L  L+ L VS N + ++P+ I     L +    +NQL ELP ++G  + L + 
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N +  LP+ ++  +++ +L++  N+L  + +  I   T L EL  S N L  +PE 
Sbjct: 61  NLASNLLIKLPKTISSLTQLKELNLRENQLADVPDE-IGFLTQLQELWLSSNQLTHLPEM 119

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IGSL++L  L L+ N++  +P S++    L    +  N L+ LP  +G L+ L  LDL  
Sbjct: 120 IGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKE 179

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL         L RL  LDL++N L+ LP  IG ++ L +L L  N L +L  S+ +  
Sbjct: 180 NQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGH-- 237

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               LK L                              KEL +    LS +P  I     
Sbjct: 238 ----LKQL------------------------------KELCVCNNQLSNLPGSIGSLRR 263

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + K+DLS N +  LP  + S   L  L LS N++K  P++I  SL+ L  L L NN L +
Sbjct: 264 LRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESI-GSLTQLLGLSLSNNQLTE 322

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           +P+                            SL  L+ L L   QL E P  I  L +L 
Sbjct: 323 LPT-------------------------AICSLTDLESLRLSDNQLTEIPESISDLTELE 357

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L+LS+N L  +P     LT L    LS+N ++ LP
Sbjct: 358 WLNLSRNQLTELPAAIGLLTELETFYLSENQLTELP 393



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 152/291 (52%), Gaps = 6/291 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L+KL LA N +  L E + +L  L  L + +N+L+ LP +IG L  LK L V  N + 
Sbjct: 193 IRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLS 252

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IGS   L K D S NQL  LP S+G    L     S N +  LPE +   +++  
Sbjct: 253 NLPGSIGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLG 312

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I S T L  L  S N L  +PE+I  L+ L  L+L +N++  +P+
Sbjct: 313 LSLSNNQLTELPTA-ICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPA 371

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---KEYCVEACQLRLSVLD 281
           +I     L  FY+  N L+ LP  +G L +L  + L  NQL    E      QLR   L 
Sbjct: 372 AIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLR--RLY 429

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           L NN L+ LP  IG +  L ++ L GNPL +  +++    T A+L YLR++
Sbjct: 430 LENNQLTELPVAIGSLVQLEEIKLNGNPLNSDLATVYAQGTSAVLAYLRAK 480



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 201/431 (46%), Gaps = 60/431 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L DVP+E+   F              LQ+L L+ N +  L E + +L  L  L
Sbjct: 83  LNLRENQLADVPDEI--GF-----------LTQLQELWLSSNQLTHLPEMIGSLTQLQEL 129

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L++LP ++  L  L  L +  N +  +P+ IGS T L + D   NQL  LP S+
Sbjct: 130 FLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESV 189

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L     ++N +T LPE +   S++++L +  N+L  L  + I     L EL    
Sbjct: 190 GSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKS-IGHLKQLKELCVCN 248

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+ +P +IGSL RL ++DL  N++  +P SI     L    +  N L  LP  +G L+
Sbjct: 249 NQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLT 308

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L +NQL E     C L  L  L LS+N L+ +P  I  +T L  L L+ N L  
Sbjct: 309 QLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTE 368

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           L +++       LL  L +  L EN+                               L+ 
Sbjct: 369 LPAAI------GLLTELETFYLSENQ-------------------------------LTE 391

Query: 372 IPSEIWEAGEITKLD---LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           +P  I   G + +LD   L  N + +LP   SS   L+ L L  N++ + P AI  SL  
Sbjct: 392 LPESI---GALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAI-GSLVQ 447

Query: 429 LSCLKLDNNPL 439
           L  +KL+ NPL
Sbjct: 448 LEEIKLNGNPL 458



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 182/393 (46%), Gaps = 64/393 (16%)

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +PE +   +++ KL V  N+LT L  + I     L EL    N L  +PE IGSL +L  
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPES-ICLLINLQELSLENNQLTELPEAIGSLIQLQE 59

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L  N ++ +P +IS    L E  +  N L+ +P E+G L++L  L L SNQL      
Sbjct: 60  LNLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQL------ 113

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                           + LP  IG +T L++L L  N L  L  SL N            
Sbjct: 114 ----------------THLPEMIGSLTQLQELFLYSNQLTDLPESLAN------------ 145

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                TRL+     LSLE  +L+ +P  I     + +LDL  N 
Sbjct: 146 --------------------LTRLNW----LSLETNHLTVLPETIGSLTLLNELDLKENQ 181

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP  + S   L+ L L+ N++   P++I  SLS L+ L L NN L  +P      + 
Sbjct: 182 LTSLPESVGSLIRLKKLDLADNQLTHLPESI-GSLSRLNELCLCNNQLNSLPK-SIGHLK 239

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ L +  N +++LP +    SL  L+++ L   QL   P  I  L QL  LDLS N L
Sbjct: 240 QLKELCVCNNQLSNLPGS--IGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQL 297

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + +PE   +LT L  L LS+N ++ LP  + S+
Sbjct: 298 KHLPESIGSLTQLLGLSLSNNQLTELPTAICSL 330



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LS+  L ++P  +              +  +L+ L L+ N + +L   +  L  L  
Sbjct: 335 SLRLSDNQLTEIPESIS-------------DLTELEWLNLSRNQLTELPAAIGLLTELET 381

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
             +S N+L+ELP +IG L  L  + +  N ++K+P+   S   L +    +NQL ELP +
Sbjct: 382 FYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVA 441

Query: 133 LGRCLNLSDFKASNNCITSLPEDLA 157
           +G  + L + K + N + S   DLA
Sbjct: 442 IGSLVQLEEIKLNGNPLNS---DLA 463


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 249/520 (47%), Gaps = 71/520 (13%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  E Y++  +A         +D++ LIL+   +  L ++++ L  L +L++ HN+L+ 
Sbjct: 31  EVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP  +G+  NL + 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T+LP+++     + +L++   KLT L    I     L EL  S N L  +P+ 
Sbjct: 146 DLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +G L  L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH 
Sbjct: 205 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 264

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
                                 N L+ LP EIG++  L++L L  N L TL         
Sbjct: 265 ----------------------NRLATLPMEIGQLKNLQELDLNSNKLTTL--------- 293

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 380
           P  ++ LR+        E    +  L T+   +      K L+L    L+ +P EI E  
Sbjct: 294 PKEIRQLRNL------QELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQ 347

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L 
Sbjct: 348 NLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQRLDLHQNQLT 406

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            +P    K+I  LQ                     +LQEL L   QL   P +I +LQ L
Sbjct: 407 TLP----KEIGQLQ---------------------NLQELCLDENQLTTLPKEIEQLQNL 441

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           R+LDL  N L ++P+    L +L EL L +N ++  P E+
Sbjct: 442 RVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 481


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 172/523 (32%), Positives = 258/523 (49%), Gaps = 42/523 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+     +L+ L LA+N  E++ E +  L  L  LN+S N+LS LP  +G+L  L SL +
Sbjct: 65  DEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYL 124

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR----CLN---------------- 138
             N +  +P+ +G   +L   D SSNQL  LP  +G+     LN                
Sbjct: 125 RSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQL 184

Query: 139 --LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L+    S+N +++LPE +     ++ LD+  N+L+ L   ++     LT L  S N L
Sbjct: 185 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLP-EVVGQLQSLTSLNLSSNQL 243

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + +PE +G L  L  LDL  N++ ++P  +    SL   Y+ +N LS LP  +G+L  L 
Sbjct: 244 STLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLT 303

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +LDL SNQL        QL+ L+ L+L +N LS LP  +G++ +L  L L+ N L TL  
Sbjct: 304 SLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTL-- 361

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  P  +  L+S    N  S   +T  +++     L+     L L    LS +P  
Sbjct: 362 -------PEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLT----SLDLSSNQLSTLPEV 410

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           + +   +T L L  N +  LP  +    SL +L LS N++   P+ ++  L SL+ L L 
Sbjct: 411 VGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPE-VVGQLQSLTSLNLR 469

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           +N L  +P +    +  L  LDLS N +++LPE      L  L  L LR  QL   P  +
Sbjct: 470 SNQLSTLP-EAVGQLQSLTSLDLSSNQLSTLPE--VVGQLQSLTSLDLRSNQLSTLPEVV 526

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +LQ L  LDLS N L ++PE    L SLT L L  N +S LP
Sbjct: 527 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP 569



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 167/496 (33%), Positives = 245/496 (49%), Gaps = 43/496 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SLD+SFN +  +
Sbjct: 164 LTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTL 223

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L   + SSNQL  LP  +G+  +L+    S+N +++LPE +     ++ L 
Sbjct: 224 PEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLY 283

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L    +     LT L  S N L+ +PE +G L  L  L+L  N++ ++P  +
Sbjct: 284 LRSNQLSTLPEA-VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVV 342

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+ +N LS LP  +G+L  L +L+L SNQL        QL+ L+ LDLS+N
Sbjct: 343 GQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSN 402

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            LS LP  +G++ +L  L L  N L T                    LPE          
Sbjct: 403 QLSTLPEVVGQLQSLTSLYLRSNQLST--------------------LPE---------- 432

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                +    S+TS  L L    LS +P  + +   +T L+L  N +  LP  +    SL
Sbjct: 433 ----AVGQLQSLTS--LDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSL 486

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
            +L LS N++   P+ ++  L SL+ L L +N L  +P +    +  L  LDLS N +++
Sbjct: 487 TSLDLSSNQLSTLPE-VVGQLQSLTSLDLRSNQLSTLP-EVVGQLQSLTSLDLSSNQLST 544

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LPE      L  L  LYLR  QL   P  I +LQ L  LDLS N L  +P     L +L 
Sbjct: 545 LPE--VVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLC 602

Query: 525 ELDLSDNNISALPPEL 540
            L L  N +  LP EL
Sbjct: 603 SLFLGGNFLEQLPAEL 618



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 161/485 (33%), Positives = 252/485 (51%), Gaps = 21/485 (4%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           NN++ L +++  L  L  L +++N+  E+P  +G L  L+SL++S N +  +P+ +G   
Sbjct: 58  NNLQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQ 117

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L      SNQL  LP  +G+  +L+    S+N +++LPE +   S ++ L++  N+L+ 
Sbjct: 118 SLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQS-LTSLNLRSNQLST 176

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   ++     LT L  S N L+ +PE +G L  L  LDL  N++ ++P  +    SL  
Sbjct: 177 LP-EVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTS 235

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             + +N LS LP  +G+L  L +LDL SNQL        QL+ L+ L L +N LS LP  
Sbjct: 236 LNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEA 295

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +G++ +L  L L+ N L TL         P ++  L+S    N  S   +T  +++    
Sbjct: 296 VGQLQSLTSLDLSSNQLSTL---------PEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQ 346

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
            L+     L L    LS +P  + +   +T L+LS N +  LP  +    SL +L LS N
Sbjct: 347 SLT----SLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSN 402

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   P+ ++  L SL+ L L +N L  +P +    +  L  LDLS N +++LPE     
Sbjct: 403 QLSTLPE-VVGQLQSLTSLYLRSNQLSTLP-EAVGQLQSLTSLDLSSNQLSTLPE--VVG 458

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L  L LR  QL   P  + +LQ L  LDLS N L ++PE    L SLT LDL  N 
Sbjct: 459 QLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQ 518

Query: 533 ISALP 537
           +S LP
Sbjct: 519 LSTLP 523



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 163/479 (34%), Positives = 245/479 (51%), Gaps = 32/479 (6%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSF---------NSIMKIPDEIGSATALVKFDC 121
           + L+++   + ELP  IG+L  LK+L +           N++  +PDEIG  T L     
Sbjct: 19  STLDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFL 78

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           + NQ +E+P  +GR   L     S+N +++LPE +     ++ L +  N+L+ L   ++ 
Sbjct: 79  AYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP-EVVG 137

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               LT L  S N L+ +PE +G  S L  L+L  N++ ++P  +    SL    + +N 
Sbjct: 138 QLQSLTSLDLSSNQLSTLPEVVGQQS-LTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQ 196

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           LS LP  +G+L  L +LDL  NQL        QL+ L+ L+LS+N LS LP  +G++ +L
Sbjct: 197 LSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSL 256

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
             L L+ N L TL    V G   +L   YLRS       ++ ST  E +  +    S+TS
Sbjct: 257 TSLDLSSNQLSTLPE--VVGQLQSLTSLYLRS-------NQLSTLPEAVGQLQ---SLTS 304

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
             L L    LS +P  + +   +T L+L  N +  LP  +    SL +L LS N++   P
Sbjct: 305 --LDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLP 362

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           +A+   L SL+ L L +N L  +P +    +  L  LDLS N +++LPE      L  L 
Sbjct: 363 EAV-GQLQSLTSLNLSSNQLSTLP-EVVGQLQSLTSLDLSSNQLSTLPE--VVGQLQSLT 418

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            LYLR  QL   P  + +LQ L  LDLS N L ++PE    L SLT L+L  N +S LP
Sbjct: 419 SLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLP 477



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 146/441 (33%), Positives = 226/441 (51%), Gaps = 25/441 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SL++  N +  +
Sbjct: 279 LTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTL 338

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L     SSNQL  LP ++G+  +L+    S+N +++LPE +     ++ LD
Sbjct: 339 PEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLD 398

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L   ++     LT L    N L+ +PE +G L  L  LDL  N++ ++P  +
Sbjct: 399 LSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVV 457

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N LS LP  +G+L  L +LDL SNQL        QL+ L+ LDL +N
Sbjct: 458 GQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSN 517

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTT 344
            LS LP  +G++ +L  L L+ N L TL    V G   +L   YLRS       ++ ST 
Sbjct: 518 QLSTLPEVVGQLQSLTSLDLSSNQLSTLPE--VVGQLQSLTSLYLRS-------NQLSTL 568

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E    +    S+TS  L L    LS +P +I +   +  L L  N +++LP ELS    
Sbjct: 569 PE---VIGQLQSLTS--LDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLH 623

Query: 405 LQTLIL-SRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           L+ L L S + I D +   +L +  +        N L  + SD    +P L++LDLS+N 
Sbjct: 624 LEKLSLGSASLIFDSYYHNVLRAFGA----SKQGNKLTHI-SDCLFSLPSLEVLDLSFNQ 678

Query: 463 ASLPENPPFSSLPHLQELYLR 483
            S  ++    SL  L+++ LR
Sbjct: 679 LSRVDS-KIQSLEKLKQIDLR 698



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 24/287 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SL++  N +  +
Sbjct: 417 LTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTL 476

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L   D SSNQL  LP  +G+  +L+     +N +++LPE +     ++ LD
Sbjct: 477 PEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLD 536

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L   ++     LT L    N L+ +PE IG L  L  LDL  N++  +P  I
Sbjct: 537 LSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQI 595

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL----------HSNQLKEYC------- 269
               +L   ++G N L  LPAEL +L  L  L L          + N L+ +        
Sbjct: 596 CQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNK 655

Query: 270 ---VEACQL---RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  C      L VLDLS N LS +  +I  +  L+++ L GNPL
Sbjct: 656 LTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPL 702



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 101/228 (44%), Gaps = 34/228 (14%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SL +  N +  +
Sbjct: 509 LTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTL 568

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG   +L   D S NQL ELP  + +   L       N +  LP +L+    + KL 
Sbjct: 569 PEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLS 628

Query: 167 V----------------------EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +                      +GNKLT +S+ L  S   L  L  S N L+ +   I 
Sbjct: 629 LGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLF-SLPSLEVLDLSFNQLSRVDSKIQ 687

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           SL +L ++DL  N  L IP  I          +G N   A P E+ K+
Sbjct: 688 SLEKLKQIDLRGNP-LPIPPEI----------LGGNRAGAQPGEIAKI 724


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 166/522 (31%), Positives = 253/522 (48%), Gaps = 29/522 (5%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +       +D++ L L+ N +  L  ++  L  L  LN+S+N+L+ LP 
Sbjct: 24  NKVYRDFNEALKN-----PMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPN 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ LD+  N +   P+EI     L     + NQL  LP  +G    L      
Sbjct: 79  EIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLK 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + +LP ++    ++ +L +  N L  L    I     L +L    N L  +P+ IG 
Sbjct: 139 NNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKE-IGKLQNLEQLYLEDNQLTTLPQEIGQ 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  LD+  N + ++P+ I    SL    + NN L  LP E+GKL  L  L+L +NQL
Sbjct: 198 LENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +    E  QL+ L  L L +N L  LP EIG +  L  L L  N L TL         P 
Sbjct: 258 RTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETL---------PN 308

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSV--TSKELSLEGMNLSAIPSEIWEAGEI 382
            +  LRS                LIT+   +        L+L    L+ +P+EI +   +
Sbjct: 309 EIGKLRSL------KRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENL 362

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L+L  N ++ LP E+    +LQ L L  N++K  P+ I   L +L  L L+NN L+ +
Sbjct: 363 QYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI-GQLENLQYLNLENNQLKTL 421

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P++    +  LQ L+L  N + +LP       L +LQ L L   QL+  P +I RL+ L+
Sbjct: 422 PNE-IGQLENLQYLNLENNQLKTLPN--EIGQLENLQYLNLENNQLKTLPNEIGRLENLQ 478

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+L  N L+++P     L +L  L+L  N +  LP E+V +
Sbjct: 479 YLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGL 520



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 161/485 (33%), Positives = 241/485 (49%), Gaps = 32/485 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWW--------EAVDLQKL---ILAHNNIEKLKE 62
           LNLSN  L  +PNE+ +      E D +         E V LQ+L    LA N +  L +
Sbjct: 66  LNLSNNRLTTLPNEIGR-LQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPK 124

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N L+ LP+ IG L  LK L +  N +M +P EIG    L +    
Sbjct: 125 EIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLE 184

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL D   SNN +T+LP ++     + +L++  N L  L N  I  
Sbjct: 185 DNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE-IGK 243

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL  S N L  +P+ IG L  L  L L  N+++++P  I     L   Y+ NN L
Sbjct: 244 LQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHL 303

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+GKL  L  L L  NQL     E      L  L+LSNN L+ LP EIG++  L+
Sbjct: 304 ETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQ 363

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L+TL + +  G     L+YL       E+++  T   ++  +        + 
Sbjct: 364 YLNLENNQLKTLPNEI--GQLEN-LQYLNL-----ENNQLKTLPNEIGQLE-----NLQY 410

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+LE   L  +P+EI +   +  L+L  N ++ LP E+    +LQ L L  N++K  P+ 
Sbjct: 411 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNE 470

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L +L  L L+NN L+ +P++    +  L++L+L  N + +LP+      L HLQ L
Sbjct: 471 I-GRLENLQYLNLENNQLKTLPNE-IGRLQNLKVLNLGGNQLVTLPQ--EIVGLKHLQIL 526

Query: 481 YLRRM 485
            L+ +
Sbjct: 527 KLKNI 531



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 15/311 (4%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+   LNLSN  L  +PNE+ K               +L++L L++N +  L +++  L 
Sbjct: 222 RSLKRLNLSNNLLITLPNEIGK-------------LQNLEELNLSNNQLRTLPQEIGQLQ 268

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++ HN+L  LP  IG L  L+ L +  N +  +P+EIG   +L +     NQL  
Sbjct: 269 ELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLIT 328

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL +   SNN + +LP ++     +  L++E N+L  L N  I     L  
Sbjct: 329 LPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNE-IGQLENLQY 387

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P  IG L  L  L+L  N++ ++P+ I    +L    + NN L  LP E
Sbjct: 388 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNE 447

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L+L +NQLK    E  +L  L  L+L NN L  LP EIG++  L+ L L G
Sbjct: 448 IGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGG 507

Query: 308 NPLRTLRSSLV 318
           N L TL   +V
Sbjct: 508 NQLVTLPQEIV 518



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 143/316 (45%), Gaps = 43/316 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLSN  LR +P E+              +  +L+ L L HN +  L +++  L  L  
Sbjct: 249 ELNLSNNQLRTLPQEI-------------GQLQELEWLHLEHNQLITLPQEIGTLQKLEY 295

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA----------------- 115
           L + +N L  LP  IG+L  LK L +  N ++ +P EIG+                    
Sbjct: 296 LYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNE 355

Query: 116 ------LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L   +  +NQLK LP+ +G+  NL      NN + +LP ++     +  L++E 
Sbjct: 356 IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN 415

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L  L N  I     L  L    N L  +P  IG L  L  L+L  N++ ++P+ I   
Sbjct: 416 NQLKTLPNE-IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRL 474

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L    + NN L  LP E+G+L  L  L+L  NQL     E   L+ L +L L N    
Sbjct: 475 ENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKN---- 530

Query: 289 GLPPEIGKMTTLRKLL 304
            +P  + +  T+RKLL
Sbjct: 531 -IPALLSEKETIRKLL 545



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 197/422 (46%), Gaps = 53/422 (12%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           +  K D E NK+    N  + +   +  L  S N L  +P  IG L +L  L+L  NR+ 
Sbjct: 15  RFCKRDAEDNKVYRDFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLT 74

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           ++P+ I    +L E  + +N L+  P E+ +L +L  L L  NQL     E   L +L  
Sbjct: 75  TLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQH 134

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENED 338
           L L NN L+ LP EIG++  L++L L  N L TL   +  G    L + YL       ED
Sbjct: 135 LYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI--GKLQNLEQLYL-------ED 185

Query: 339 SEAST---------TKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAG 380
           ++ +T           +DL      L+    E+    SL+ +NLS      +P+EI +  
Sbjct: 186 NQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQ 245

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            + +L+LS N ++ LP E+     L+ L L  N++   P  I T L  L  L L NN L 
Sbjct: 246 NLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGT-LQKLEYLYLKNNHLE 304

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQ 478
            +P++  K +  L+ L L +N + +LP+                           L +LQ
Sbjct: 305 TLPNEIGK-LRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQ 363

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   QL+  P +I +L+ L+ L+L  N L+++P     L +L  L+L +N +  LP 
Sbjct: 364 YLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPN 423

Query: 539 EL 540
           E+
Sbjct: 424 EI 425


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 285/559 (50%), Gaps = 64/559 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +  L  VP+E+              E  +LQKL L+ N I K+ E L  L  LT L
Sbjct: 211 LNLKHSELTIVPSEI-------------GECHELQKLDLSFNKISKIPESLYALEQLTEL 257

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-----------------------IPDEI 110
           N+  N L+ +P  IG+L  +K+L++S N I K                       IPDEI
Sbjct: 258 NMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEI 317

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G   ++   D S N++ ++P SL     L++   ++N +TS+P+++     M  L++  N
Sbjct: 318 GKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSN 377

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           K+  +  +L  +   LTEL    N L  +P+ I  L  +  L+L  N++  IP S+    
Sbjct: 378 KIEKIPASL-CTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQ 436

Query: 231 SLAEF------YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            L E        M +NAL+++P E+ KL  +  L+L +N++K+     C L +L+ L ++
Sbjct: 437 QLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMN 496

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEAS 342
            N+L+ +P EI K+ +++ L L  N +  +  SL      AL      +L E N  S A 
Sbjct: 497 GNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLC-----AL-----EKLTELNMASNAL 546

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T+  D I+    + +    L+L+   +  IP+ +    ++T+L ++ N++  +P E+   
Sbjct: 547 TSIPDEISKLKSMKI----LNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKL 602

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            S++TL LS NKI+  PD+ L +L  L+ L + +N L  VP D    +  ++ L+LS N 
Sbjct: 603 KSMETLNLSFNKIEKIPDS-LCALEQLTELNMRSNALTSVP-DEIGKLKSMKTLNLSSNK 660

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           I  +P +    +L  L EL +R   L   P +I +L+ ++IL+L  N ++ IP+    L 
Sbjct: 661 IEKIPAS--LCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQ 718

Query: 522 SLTELDLSDNNISALPPEL 540
            LTELD+  N ++++P E+
Sbjct: 719 QLTELDIRSNALTSIPDEI 737



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 277/532 (52%), Gaps = 63/532 (11%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  +++DL +L         L +DLR      +LN+ H++L+ +P+ IGE H L+ LD+S
Sbjct: 192 KKHKSIDLSRL--------GLYKDLR------ILNLKHSELTIVPSEIGECHELQKLDLS 237

Query: 100 FNSIMKI-----------------------PDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           FN I KI                       PDEIG   ++   + SSN+++++P+SL   
Sbjct: 238 FNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCAL 297

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L++    +N +TS+P+++     M  LD+  NK+  + ++L A    LTEL  + N L
Sbjct: 298 EKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCA-LEKLTELYMNDNAL 356

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  +  L+L  N+I  IP+S+     L E  M  NAL+A+P E+ KL  + 
Sbjct: 357 TSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMKYNALTAIPDEISKLKSMN 416

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLD------LSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L+L +N++++     C L +L+ LD      +++N+L+ +P EI K+ +++ L L  N 
Sbjct: 417 ILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNK 476

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           ++ +         PA L  L+       +  A T+  D I+    + +    L+L    +
Sbjct: 477 MKKI---------PASLCALQQLTELYMNGNALTSIPDEISKLKSMKI----LNLYFNKI 523

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             IP  +    ++T+L+++ N++  +P E+S   S++ L L  NK+K  P A L +L  L
Sbjct: 524 DKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIP-ASLCALQQL 582

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
           + L ++ N L  +P D    +  ++ L+LS+N I  +P++    +L  L EL +R   L 
Sbjct: 583 TELYMNGNALTSIP-DEIGKLKSMETLNLSFNKIEKIPDS--LCALEQLTELNMRSNALT 639

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +L+ ++ L+LS N ++ IP     L  LTEL +  N ++A+P E+
Sbjct: 640 SVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEI 691



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 271/582 (46%), Gaps = 97/582 (16%)

Query: 52   LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
            +A N +  + +++  L  + +LN+ +NK+ ++PA++  L  L  L ++ N++  IPDEI 
Sbjct: 449  MASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIS 508

Query: 112  SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               ++   +   N++ ++P SL     L++   ++N +TS+P++++    M  L+++ NK
Sbjct: 509  KLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNK 568

Query: 172  LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +  +  +L A    LTEL  + N L  +P+ IG L  +  L+L  N+I  IP S+     
Sbjct: 569  MKKIPASLCA-LQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQ 627

Query: 232  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
            L E  M +NAL+++P E+GKL  + TL+L SN++++     C L +L+ L + +N+L+ +
Sbjct: 628  LTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAI 687

Query: 291  PPEIGKMTTLRKLLLTGNPLRTLRSSLV------------NGPT--PALLKYLRSRLPEN 336
            P EI K+ +++ L L  N +  +  SL             N  T  P  +  L+S    N
Sbjct: 688  PDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILN 747

Query: 337  EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             D+       D +    +L+    +L++E   L+AIP EI +   +T L+LS N I+++P
Sbjct: 748  LDNNKMEKIPDSLCALEKLT----DLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIP 803

Query: 397  PELSSCASLQTLIL-----SRNKIKDWPDAILTSLS----SLSCLKLDNNP------LRQ 441
              L  CA ++ L L     + NK+K++P  ++  L     SL   KL   P      LR 
Sbjct: 804  DSL--CAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRY 861

Query: 442  VPSDGFKDIPMLQI-------------------------------------LDLSYNIAS 464
             P    K + ++                                       LDLSY    
Sbjct: 862  HPCRKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHK 921

Query: 465  LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS------------------ 506
              +     S  HL+ L L   +L   P++I    +L+ L+LS                  
Sbjct: 922  SIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLT 981

Query: 507  -----QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
                  N+L SIP+    L S+  L+LS N I+ +P  L ++
Sbjct: 982  EINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCAL 1023



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 208/401 (51%), Gaps = 28/401 (6%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I S+ ED A C +M +LD+   K   +  + +  +  L  L    + L  +P  IG    
Sbjct: 172 IQSVQEDTATCVEM-ELDLSHKKHKSIDLSRLGLYKDLRILNLKHSELTIVPSEIGECHE 230

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +LDL  N+I  IP S+     L E  M +NAL+++P E+GKL  + TL+L SN++++ 
Sbjct: 231 LQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKI 290

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
               C L +L+ L++ +N+L+ +P EIGK+ ++  L L+ N +  +  SL      AL K
Sbjct: 291 PASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLC-----ALEK 345

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                + +N    A T+  D I     +    K L+L    +  IP+ +    ++T+LD+
Sbjct: 346 LTELYMNDN----ALTSVPDEIGKLKSM----KTLNLSSNKIEKIPASLCTLEQLTELDM 397

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N++  +P E+S   S+  L L  NK++  PD+ L +L  L+  +LD N    + S+  
Sbjct: 398 KYNALTAIPDEISKLKSMNILNLDNNKMEKIPDS-LCALQQLT--ELDMNDXXXMASNAL 454

Query: 448 KDIP-------MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
             IP        ++IL+L  N +  +P +    +L  L ELY+    L   P +I +L+ 
Sbjct: 455 TSIPDEISKLKSMKILNLDNNKMKKIPAS--LCALQQLTELYMNGNALTSIPDEISKLKS 512

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++IL+L  N +  IP+    L  LTEL+++ N ++++P E+
Sbjct: 513 MKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEI 553



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 258/591 (43%), Gaps = 119/591 (20%)

Query: 14   LNLSNRSLRDVP---------NEVYKNFDE-AGEGDKWWEAVDLQKLILAHNNIEKLKED 63
            LNL N  ++ +P          E+Y N +      D+  +   ++ L L+ N IEK+ + 
Sbjct: 562  LNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDS 621

Query: 64   LRNLPLLT-----------------------VLNVSHNKLSELPAAIGELHMLKSLDVSF 100
            L  L  LT                        LN+S NK+ ++PA++  L  L  L +  
Sbjct: 622  LCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRS 681

Query: 101  NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
            N++  IPDEI    ++   +  +N+++++P SL     L++    +N +TS+P+++    
Sbjct: 682  NALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLK 741

Query: 161  KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
             M  L+++ NK+  + ++L A    LT+L    N L  +P+ IG L  +  L+L  N+I 
Sbjct: 742  SMKILNLDNNKMEKIPDSLCA-LEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIE 800

Query: 221  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLRLSV 279
             IP S+  C  + +                   KL  L L+ N+LKE+  +   +L L  
Sbjct: 801  KIPDSL--CAGIKKL------------------KLIHLRLNENKLKEFPWQVIEELPLCE 840

Query: 280  LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS-SLVNGPTPALLKYLRSRLPENED 338
            L L  N L  +P  IG+       LL  +P R  +  SL++     +     ++      
Sbjct: 841  LSLCGNKLQTVPDHIGR-------LLRYHPCRKCKHVSLMHYRKTCIYFGYSTKWRMRRR 893

Query: 339  SEAST---TKEDLITMATRLSVTS-----------------KELSLEGMNLSAIPSEIWE 378
               +T   TK+    +  +L ++                  + L+LE   L+ +PSEI E
Sbjct: 894  RGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGE 953

Query: 379  AGEITKLDLSRNSIQE-----------------------LPPELSSCASLQTLILSRNKI 415
              ++ KL+LS N I +                       +P E+S   S++TL LS NKI
Sbjct: 954  CHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKI 1013

Query: 416  KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
               PD+ L +L  L  L ++ N L  +PS   +     Q LD+  N AS+  +  F    
Sbjct: 1014 AKIPDS-LCALEQLRILNMNGNALTAIPSVKLQH----QTLDID-NGASVF-SLCFGMSE 1066

Query: 476  HLQELYLRRMQ-----LREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNL 520
             +++L L R+Q     L+E P  I+  L  L  L L  N LQ++P+    L
Sbjct: 1067 RIKKLKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHIGRL 1117



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 3/206 (1%)

Query: 70   LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
            L +LN+ H +L+ +P+ IGE H L+ L++SFN I KIPD + +   L + +  SN L  +
Sbjct: 934  LRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSI 993

Query: 130  PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            P  + +  ++     S N I  +P+ L    ++  L++ GN LT + +  +   T+  + 
Sbjct: 994  PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDN 1053

Query: 190  IASK-NLLNGMPETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPA 247
             AS  +L  GM E I  L +LIRL L+ N++   P   I    SL +  +  N L  +P 
Sbjct: 1054 GASVFSLCFGMSERIKKL-KLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPD 1112

Query: 248  ELGKLSKLGTLDLHSNQLKEYCVEAC 273
             +G+L +    ++  ++L+ +  + C
Sbjct: 1113 HIGRLLRYHPCEVCEHRLRMHYRKPC 1138


>gi|301112346|ref|XP_002905252.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095582|gb|EEY53634.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 785

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 180/595 (30%), Positives = 276/595 (46%), Gaps = 70/595 (11%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M R L+ AR SGSLNLS+R     PNEV++ +DE  E +  WE   L+KL L++N I +L
Sbjct: 25  MARTLRLARQSGSLNLSSRDFHVFPNEVFRLYDELDEDEHSWECAVLKKLDLSYNEIAEL 84

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKF 119
             ++  L  L  L + HN L +LP  +  L  L SLD+S N +   +P+++G    L + 
Sbjct: 85  PNEVETLKYLVSLKMRHNHLRQLPLTLWSLETLTSLDLSNNELEGCLPEQLGKLDKLREL 144

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               N+L +LP S+G  ++L   +  +N + +LP  +     +  L    N++  L    
Sbjct: 145 GLEGNKLTQLPESIGGLVHLEVLRVESNQLKALPSTIGKLRNLKTLTAHSNQIAALP--- 201

Query: 180 IASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            AS+  LT L+     KN L    +    L+ +  +DL QN++   P+       L + +
Sbjct: 202 -ASFNSLTGLLTLDLKKNCLATTGDAFLELTAVKYIDLRQNKLEIFPTLPENNSCLDQLF 260

Query: 237 MGNNALSALPAE--LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           +G N L  +P E  L     L  LD+  N+L+       QL RL  LD++NN L  LPP 
Sbjct: 261 LGFNLLRDVPQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDLFDLPPG 320

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-------NEDSEASTTKE 346
            G +  L  LL+ GNPLR++R S+++  T  L KYLR+R           E+ +    ++
Sbjct: 321 FGYLKYLTHLLVEGNPLRSIRRSIISAGTEPLKKYLRTRGKPPVGVDAMEEEVDEFAIRQ 380

Query: 347 DLIT----MAT----------RLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKLD 386
           ++I     MA           R +  S  L L  M L  +P ++  AG+      + +L+
Sbjct: 381 EVIEQDEPMAEEPPLEDEYLFRNAAASGNLQLVDMKLQNLPYQLHAAGKHRFGESLLQLN 440

Query: 387 LSRNSIQELPPELSSCASLQTLI-----------------------LSRNKI-KDWPDAI 422
           LS+N + ELP       SLQTL                        LS+N +  D   A+
Sbjct: 441 LSKNWLVELPATAGQLTSLQTLTAEQCGLKSVHASIAMLPRLEHLRLSKNSLTTDAVTAM 500

Query: 423 LTS------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
           L S       SSL  L L NN L  +P +  +++  +  L LS+N        P+SS+  
Sbjct: 501 LASGTRAGISSSLKELDLRNNVLTDIPQN-LQNLQAMDTLLLSFNRIKGLNGFPWSSMSQ 559

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           L  L +   +L    T + +  +L  L L  N L+ IP  F    +L  L L  N
Sbjct: 560 LSVLSIAHNRLESCGT-VYQAPKLTSLSLENNELRQIPAEFALCENLRALYLGGN 613



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L++ + S N L ELP++ G+  +L    A    + S+   +A   ++  L +  N LT 
Sbjct: 435 SLLQLNLSKNWLVELPATAGQLTSLQTLTAEQCGLKSVHASIAMLPRLEHLRLSKNSLTT 494

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                      +T ++AS           G  S L  LDL  N +  IP ++    ++  
Sbjct: 495 ---------DAVTAMLASGT-------RAGISSSLKELDLRNNVLTDIPQNLQNLQAMDT 538

Query: 235 FYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
             +  N +  L       +S+L  L +  N+L E C    Q  +L+ L L NN L  +P 
Sbjct: 539 LLLSFNRIKGLNGFPWSSMSQLSVLSIAHNRL-ESCGTVYQAPKLTSLSLENNELRQIPA 597

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           E      LR L L GNP R +R+ ++N  T A+LKYLR+RLP
Sbjct: 598 EFALCENLRALYLGGNPQRGIRAHILNSGTEAVLKYLRNRLP 639



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 41/318 (12%)

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
           C  L +  +  N ++ LP E+  L  L +L +  N L++  +    L  L+ LDLSNN L
Sbjct: 68  CAVLKKLDLSYNEIAELPNEVETLKYLVSLKMRHNHLRQLPLTLWSLETLTSLDLSNNEL 127

Query: 288 SG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            G LP ++GK+  LR+L L GN L                    ++LPE+          
Sbjct: 128 EGCLPEQLGKLDKLRELGLEGNKL--------------------TQLPES---------- 157

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I     L V    L +E   L A+PS I +   +  L    N I  LP   +S   L 
Sbjct: 158 --IGGLVHLEV----LRVESNQLKALPSTIGKLRNLKTLTAHSNQIAALPASFNSLTGLL 211

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASL 465
           TL L +N +    DA L  L+++  + L  N L   P+    +  + Q+  L +N+   +
Sbjct: 212 TLDLKKNCLATTGDAFL-ELTAVKYIDLRQNKLEIFPTLPENNSCLDQLF-LGFNLLRDV 269

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P+    S    L  L +R  +L+     I +L +L+ LD++ N L  +P GF  L  LT 
Sbjct: 270 PQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDLFDLPPGFGYLKYLTH 329

Query: 526 LDLSDNNISALPPELVSV 543
           L +  N + ++   ++S 
Sbjct: 330 LLVEGNPLRSIRRSIISA 347


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 168/510 (32%), Positives = 253/510 (49%), Gaps = 64/510 (12%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           +A N I  L   +  L  L  L V HN++SELP +IG+L+ ++SL + FN +  +P++ G
Sbjct: 3   IADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFG 62

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             TALV    S N LK LP+S+G   NL     ++N + SLP+ +     MS+L    N+
Sbjct: 63  DMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQ 122

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT +    I   T L +L  S N ++ +P  IG L+++ +L L+ NR+ SIP+SI     
Sbjct: 123 LTTVPTT-IGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTL 181

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +  N L  LP ELG + KL TL +  NQL+        L +L  L L +N +  L
Sbjct: 182 LQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENL 241

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IG +T+L  L+LT N L  +         PA + YL                     
Sbjct: 242 PASIGSLTSLNTLILTDNNLPEI---------PAEIGYL--------------------- 271

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
             T L+     LSL G  ++++P EI     +  L+L++NS+  LP  +   A LQ L L
Sbjct: 272 --TNLTF----LSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHL 325

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS-------------DG--FKDIPM--- 452
             N+++  P++I   LS+L+ L+LD+N L  +P              DG     +P+   
Sbjct: 326 HENELEALPESI-GDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIG 384

Query: 453 ----LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
               LQ+L+L  N ++ LP  P  + +  L+EL++   +L   P  I  L  L +L LS 
Sbjct: 385 RLTELQVLNLDGNRLSLLP--PEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSN 442

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           N L  +P     L SL EL + DNN+ + P
Sbjct: 443 NELTVLPANMTRLVSLNELWIKDNNLKSHP 472



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 85/445 (19%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           + ++ N I+ +P  IG  ++L       NQ+ ELP S+G+  N+       N + SLP  
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
             D + +  L +  N L  L  + I +   L  L  + N+L  +P+T+G L  +  L  +
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTS-IGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCN 119

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++ ++P++I  C +L +  +  NA+SALP E+G+L+K+  L L+              
Sbjct: 120 ANQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLN-------------- 165

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
                   NN L  +P  IG MT L++L L  NPL+ L + L N      ++ L      
Sbjct: 166 --------NNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGN------IQKL------ 205

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                                   K L ++   L  +P+ I   G++ +L L  N I+ L
Sbjct: 206 ------------------------KTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENL 241

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  + S  SL TLIL+ N + + P  I   L++L+ L L  NP+  +P +          
Sbjct: 242 PASIGSLTSLNTLILTDNNLPEIPAEI-GYLTNLTFLSLSGNPITSLPLE---------- 290

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                             L  L+ L L +  L   P  I  L  L++L L +N L+++PE
Sbjct: 291 ---------------IGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPE 335

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
              +L++LT+L L  NN+++LPPE+
Sbjct: 336 SIGDLSALTDLRLDHNNLTSLPPEV 360



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 174/378 (46%), Gaps = 38/378 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L L+ N I  L  ++  L  +  L +++N+L  +PA+IG + +L+ L++  N 
Sbjct: 132 ECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENP 191

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P E+G+   L       NQL+ LP+++G    L + +  +N I +LP         
Sbjct: 192 LKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPAS------- 244

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                            I S T L  LI + N L  +P  IG L+ L  L L  N I S+
Sbjct: 245 -----------------IGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSL 287

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I G  +L    +  N+L +LP  +G L+ L  L LH N+L+        L  L+ L 
Sbjct: 288 PLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLR 347

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L +N+L+ LPPE+G M++L +LLL GN L TL  S+              RL E +    
Sbjct: 348 LDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSI-------------GRLTELQVLNL 394

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
              +  L+          +EL +    LS +P  I +   +  L LS N +  LP  ++ 
Sbjct: 395 DGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTVLPANMTR 454

Query: 402 CASLQTLILSRNKIKDWP 419
             SL  L +  N +K  P
Sbjct: 455 LVSLNELWIKDNNLKSHP 472



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L+L+   L+++P++  +   +  L +S N ++ LP  + +  +L+ L L+ N ++  P
Sbjct: 45  QSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLP 104

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP------------ 466
             +   L  +S LK + N L  VP+    +   L+ LDLS+N I++LP            
Sbjct: 105 QTV-GFLRLMSELKCNANQLTTVPTT-IGECTALRQLDLSFNAISALPLEIGRLTKMKQL 162

Query: 467 --ENPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
              N    S+P        LQEL L    L+  PT++  +Q+L+ L +  N L+++P   
Sbjct: 163 LLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATI 222

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L  L EL L DN I  LP  + S+
Sbjct: 223 GALGQLRELQLGDNRIENLPASIGSL 248


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 157/502 (31%), Positives = 248/502 (49%), Gaps = 41/502 (8%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL++ +  L+ +PA IG+L  L  L +  N +  +P EIG  T+L      
Sbjct: 23  EVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLG 82

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  +P+ +G+  +L+  +  +N +TS+P ++   + + KL +EGN+LT +    I  
Sbjct: 83  CNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAE-IGQ 141

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              LTEL    N L  +P  IG L+ L  L L  N++ S+P+ I    SL E  +  N L
Sbjct: 142 LVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQL 201

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+G+L+ L  L L  N+L     E  QLR L +L L+ N L+ +P EIG++ +L 
Sbjct: 202 TSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLE 261

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            LLL  N L ++         PA +  L S      D    T+    I   T L      
Sbjct: 262 NLLLGHNQLTSV---------PAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLV----R 308

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI------------ 409
           L LEG  L+++P+EIW+   +  L+L  N +  +P E+   A+L+ L             
Sbjct: 309 LELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAE 368

Query: 410 -----------LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
                      LSRN++   P  I   L+SL  L+L +N L  VP++  +   +  ++ L
Sbjct: 369 VGRLSALRKLSLSRNRLTSLPAEI-GQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILL 427

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
              + S+P       L  L  L+LR  +L   P +I +L  L  L L++N L S+P    
Sbjct: 428 GNQLTSVPAE--IGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIG 485

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            LTSL E  L  N ++++P E+
Sbjct: 486 QLTSLVESLLGGNQLTSVPAEI 507



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 173/551 (31%), Positives = 266/551 (48%), Gaps = 54/551 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  VP E+              +   L  L L +N +  +  ++  L  LT L
Sbjct: 33  LDLRNYHLTSVPAEIG-------------QLTSLGVLHLDNNQLTSVPAEIGQLTSLTHL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L  L++  N +  +P EIG   +L K     NQL  +P+ +
Sbjct: 80  YLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEI 139

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+ + L++     N +TS+P ++   + ++ L +  N+LT +    I   T L EL    
Sbjct: 140 GQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVP-AWIGQLTSLKELTLYG 198

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L  N++ S+P+ I    +L    +  N L+++PAE+G+L+
Sbjct: 199 NQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLA 258

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L +N L+ +P EIG++T+L +L L GN L +
Sbjct: 259 SLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTS 318

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + + +    +   LK+L   L  N+ +        L  +        KEL L G  L+++
Sbjct: 319 VPAEIWQLTS---LKWL--NLGYNQLTSVPAEIGQLAAL--------KELCLYGNQLTSV 365

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI---------- 422
           P+E+     + KL LSRN +  LP E+    SL+ L LS N++   P  I          
Sbjct: 366 PAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLI 425

Query: 423 -----LTS-------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
                LTS       L+SL  L L +N L  VP++    +  L+ L L+ N + SLP   
Sbjct: 426 LLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAE-IGQLTSLEWLYLAENQLTSLPAE- 483

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L  L E  L   QL   P +I +L  L  LDL  N L S+P     LT+L EL++S
Sbjct: 484 -IGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVS 542

Query: 530 DNNISALPPEL 540
            N ++ LP E+
Sbjct: 543 RNALTLLPAEI 553



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 273/566 (48%), Gaps = 57/566 (10%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G L+L N  L  VP E+              +   L  L L  N +  +   +  L  LT
Sbjct: 54  GVLHLDNNQLTSVPAEIG-------------QLTSLTHLYLGCNQLTSVPAWIGQLTSLT 100

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L +  N+L+ +PA IG+L  L+ L +  N +  +P EIG   AL +     NQL  +P+
Sbjct: 101 HLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPA 160

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------- 175
            +G+  +L+D     N +TS+P  +   + + +L + GN+LT +                
Sbjct: 161 EIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLK 220

Query: 176 SNNLIASWTMLTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
            N L +    + +L A K      N L  +P  IG L+ L  L L  N++ S+P+ I   
Sbjct: 221 DNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQL 280

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL + Y+ +N L+++P E+G+L+ L  L+L  NQL     E  QL  L  L+L  N L+
Sbjct: 281 TSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLT 340

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-----LPENEDSEAST 343
            +P EIG++  L++L L GN L ++ + +  G   AL K   SR     LP  E  + ++
Sbjct: 341 SVPAEIGQLAALKELCLYGNQLTSVPAEV--GRLSALRKLSLSRNRLTSLPA-EIGQLTS 397

Query: 344 TKEDLITMATRLSVTSK--------ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            +E  ++     SV ++         L L G  L+++P+EI +   +  L L  N +  +
Sbjct: 398 LRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGV 457

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+    SL+ L L+ N++   P  I   L+SL    L  N L  VP++    +  L  
Sbjct: 458 PAEIGQLTSLEWLYLAENQLTSLPAEI-GQLTSLVESLLGGNQLTSVPAE-IGQLTSLTH 515

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDL  N + S+P       L  L+EL + R  L   P +I RL  L+ L L +N L S+P
Sbjct: 516 LDLVDNQLTSVPAE--VGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVP 573

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
                LTSL EL L+DN +++LP E+
Sbjct: 574 AEIGQLTSLQELWLNDNQLTSLPAEI 599



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 260/526 (49%), Gaps = 33/526 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    L  VP E+              + V L +L L  N +  +  ++  L  LT L
Sbjct: 125 LHLEGNQLTSVPAEIG-------------QLVALTELTLYGNQLTSVPAEIGQLTSLTDL 171

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  LK L +  N +  +P EIG   AL       N+L  +P+ +
Sbjct: 172 YLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEI 231

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L   + + N +TS+P ++   + +  L +  N+LT +    I   T L +L    
Sbjct: 232 GQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAE-IGQLTSLRKLYLDH 290

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L+RL+L  N++ S+P+ I    SL    +G N L+++PAE+G+L+
Sbjct: 291 NKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLA 350

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L+ NQL     E  +L  L  L LS N L+ LP EIG++T+LR+L L+ N L +
Sbjct: 351 ALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTS 410

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + + +       LL  L ++L        ++   ++  +A+ +      L L    L+ +
Sbjct: 411 VPAEIGQLRALKLLILLGNQL--------TSVPAEIGQLASLVG-----LHLRDNRLTGV 457

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   +  L L+ N +  LP E+    SL   +L  N++   P  I   L+SL+ L
Sbjct: 458 PAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEI-GQLTSLTHL 516

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  VP++    +  L+ L++S N +  LP       L  L+ LYL   +L   P
Sbjct: 517 DLVDNQLTSVPAE-VGRLTALRELNVSRNALTLLPAE--IGRLTSLKGLYLDENELTSVP 573

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +I +L  L+ L L+ N L S+P     L  L  L L  N ++++P
Sbjct: 574 AEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMP 619



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 182/377 (48%), Gaps = 38/377 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L HN +  +  ++  L  L  L +  N+L+ +PA I +L  LK L++ +N +  +
Sbjct: 283 LRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSV 342

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG   AL +     NQL  +P+ +GR   L     S N +TSLP ++   + + +L 
Sbjct: 343 PAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELR 402

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I     L  LI   N L  +P  IG L+ L+ L L  NR+  +P+ I
Sbjct: 403 LSDNQLTSVPAE-IGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEI 461

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+  N L++LPAE+G+L+ L    L  NQL     E  QL  L+ LDL +N
Sbjct: 462 GQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDN 521

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P E+G++T LR+L ++ N L  L         PA +  L S              
Sbjct: 522 QLTSVPAEVGRLTALRELNVSRNALTLL---------PAEIGRLTSL------------- 559

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         K L L+   L+++P+EI +   + +L L+ N +  LP E+     L
Sbjct: 560 --------------KGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWL 605

Query: 406 QTLILSRNKIKDWPDAI 422
             L L  N++   P AI
Sbjct: 606 HILRLGGNQLTSMPAAI 622



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 200/406 (49%), Gaps = 64/406 (15%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           +L   +P  +G LS L  LDL    + S+P+ I    SL   ++ NN L+++PAE+G+L+
Sbjct: 15  DLTGAVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLT 74

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL        QL  L+ L+L +N L+ +P EIG++ +L KL L GN L +
Sbjct: 75  SLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTS 134

Query: 313 LRSSLVNGPTPALLK---YLRSRLPENEDSEASTTKEDLITMATRLS--------VTS-K 360
           + + +  G   AL +   Y         +    T+  DL     +L+        +TS K
Sbjct: 135 VPAEI--GQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLK 192

Query: 361 ELSLEGMNLSAIPSEI-------W-------------EAGEITKLDLSR---NSIQELPP 397
           EL+L G  L+++P+EI       W             E G++  L L R   N +  +P 
Sbjct: 193 ELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPA 252

Query: 398 ELSSCASLQTLILSRNKIKDWPDAI--LTS--------------------LSSLSCLKLD 435
           E+   ASL+ L+L  N++   P  I  LTS                    L+SL  L+L+
Sbjct: 253 EIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELE 312

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            N L  VP++ ++ +  L+ L+L YN + S+P       L  L+EL L   QL   P ++
Sbjct: 313 GNQLTSVPAEIWQ-LTSLKWLNLGYNQLTSVPAE--IGQLAALKELCLYGNQLTSVPAEV 369

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            RL  LR L LS+N L S+P     LTSL EL LSDN ++++P E+
Sbjct: 370 GRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEI 415



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  +  ++  L  L  L++  N+L+ +PA IG+L  L+ L ++ N +  +P EIG  T
Sbjct: 429 NQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLT 488

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +LV+     NQL  +P+ +G+  +L+     +N +TS+P ++   + + +L+V  N LT+
Sbjct: 489 SLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTL 548

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I   T L  L   +N L  +P  IG L+ L  L L+ N++ S+P+ I     L  
Sbjct: 549 LPAE-IGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHI 607

Query: 235 FYMGNNALSALPAELGKLSKLG 256
             +G N L+++PA + KL   G
Sbjct: 608 LRLGGNQLTSMPAAIRKLKAAG 629



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 13/120 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L  VP EV +                L++L ++ N +  L  ++  L  L  L
Sbjct: 516 LDLVDNQLTSVPAEVGR-------------LTALRELNVSRNALTLLPAEIGRLTSLKGL 562

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L+ L ++ N +  +P EIG    L       NQL  +P+++
Sbjct: 563 YLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAI 622


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 264/536 (49%), Gaps = 56/536 (10%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK------EDLRNLPLLTV 72
           R+ R +  E+ + + E  +  ++WE V ++   +    +E          ++  L  +  
Sbjct: 153 RTWRTMSPELQETWPE-DQQPEYWEGVTMENSRVVKLELEDFDLTGAVPAEIGQLTSMVK 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L+ LPA IG+L  L+ L +  N +  +P EIG  T+L + + + NQL  +P+ 
Sbjct: 212 LSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPAE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           + +  +L   +   N +TS+P D+   + + +L + GN+LT +   +             
Sbjct: 272 VVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYN 331

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I   T L +    KN L  +P  IG L+ L  L L  NR+ S+P+ I    
Sbjct: 332 SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 391

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           SL +  +G N L++LPA++G+L+ L  L L  N+L     E  QL  L  LDLS+N L+ 
Sbjct: 392 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 451

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKE 346
           +P EIG++T+L +L L GN L ++ + +    +   L +  S+L   P       S  K 
Sbjct: 452 VPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKW 511

Query: 347 DLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           DL                 G N L+++P+EI +   + +L L  N +  LP E+   ASL
Sbjct: 512 DL-----------------GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASL 554

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L+L  N++   P A +  L+SL  L+LD N L  VP++    +  L+ LDLS N + S
Sbjct: 555 KKLLLGCNQLTSLP-ADIGQLTSLWELRLDGNRLTSVPAE-IGQLTSLEKLDLSDNQLTS 612

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           +P       L  L ELYL   QL   PT+I +L  L  L LS N L+S+P   + L
Sbjct: 613 VPTE--IGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIREL 666



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 215/442 (48%), Gaps = 49/442 (11%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  VP EV +  + D    G     +V         L++L L  N +  +  +
Sbjct: 258 LNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAE 317

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L   +++L+ +PA IG+L  L+  D+  N +  +P EIG  TAL +     
Sbjct: 318 IAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDG 377

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+  +L       N +TSLP D+   + + +L ++GN+LT +    I   
Sbjct: 378 NRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAE-IGQL 436

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L +L  S N L  +P  IG L+ L  L L+ N++ S+P+ I+   SL E    N+ L+
Sbjct: 437 TSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLT 496

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ++PAE+G+L+ L   DL  N+L     E  QL  L  L L  N L+ LP EIG++ +L+K
Sbjct: 497 SVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKK 556

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           LLL  N L +L         PA +  L S                             EL
Sbjct: 557 LLLGCNQLTSL---------PADIGQLTSLW---------------------------EL 580

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L+G  L+++P+EI +   + KLDLS N +  +P E+    SL  L L+ N++   P  I
Sbjct: 581 RLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEI 640

Query: 423 LTSLSSLSCLKLDNNPLRQVPS 444
              LS L  L L  N L+ VP+
Sbjct: 641 -AQLSLLEQLWLSGNRLKSVPA 661



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 167/351 (47%), Gaps = 63/351 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           +L   +P  IG L+ +++L L +N++ S+P+ I    SL E  + NN L+++PAE+G+L+
Sbjct: 194 DLTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLT 253

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L+ NQL     E  QL  L  L L  N L+ +P +IG++T+LR+L L GN L +
Sbjct: 254 SLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTS 313

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S                            +EL      L+++
Sbjct: 314 V---------PAEIAQLTSL---------------------------RELGFYNSQLTSV 337

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   + K DL +N +  +P E+    +L+ L L  N++   P A +  L+SL  L
Sbjct: 338 PAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLP-AEIGQLASLKKL 396

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L  N L  +P+D                            L  L EL L   +L   P 
Sbjct: 397 LLGCNQLTSLPAD-------------------------IGQLTSLWELRLDGNRLTSVPA 431

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +I +L  L  LDLS N L S+P     LTSLTEL L+ N ++++P E+  +
Sbjct: 432 EIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQL 482



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 1/230 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N +  +  ++  L  LT L ++ N+L+ +PA I +L  L+ L    + +  +
Sbjct: 439 LEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSV 498

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L K+D   N+L  +P+ +G+   L + +   N +TSLP ++   + + KL 
Sbjct: 499 PAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLL 558

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L  + I   T L EL    N L  +P  IG L+ L +LDL  N++ S+P+ I
Sbjct: 559 LGCNQLTSLPAD-IGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEI 617

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
               SL E Y+  N L+++P E+ +LS L  L L  N+LK       +LR
Sbjct: 618 GQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRELR 667



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 15/248 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  VP E+              +   L +L L  N +  +  ++  L  L  L
Sbjct: 442 LDLSDNQLTSVPTEIG-------------QLTSLTELYLNGNQLTSVPAEIAQLTSLREL 488

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
              +++L+ +PA IG+L  L+  D+  N +  +P EIG  TAL +     N+L  LP+ +
Sbjct: 489 GFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEI 548

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L       N +TSLP D+   + + +L ++GN+LT +    I   T L +L  S 
Sbjct: 549 GQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAE-IGQLTSLEKLDLSD 607

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L+ N++ S+P+ I+    L + ++  N L ++PA + +L 
Sbjct: 608 NQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRELR 667

Query: 254 KLG-TLDL 260
             G T+DL
Sbjct: 668 AAGCTVDL 675


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 240/475 (50%), Gaps = 44/475 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++S+  L+ LP  IG+L  L++L +  N +  +P +IG  T L      SNQL  L
Sbjct: 18  VTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL      NN ++SLP ++   + +  L +               W      
Sbjct: 78  PPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHL---------------WI----- 117

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L+ +P  IG L+ L  LDL  N++ S+P       +L    +G+N LS+LP E+
Sbjct: 118 ----NQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEI 173

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L+KL +LDL  NQL     E  QL +L  LDL +N LS LPPE G++T L+ L L  N
Sbjct: 174 GQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSN 233

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L   +V      L K     L  N+ S         I   T L    + L L    
Sbjct: 234 QLSSLPPEIVQ-----LTKLQSLDLGSNQLSSLPPE----IVQLTNL----QSLDLSSNQ 280

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS++P EI +  ++  L LS N +  LPPE+     LQ+L L  N++   P  I+  L+ 
Sbjct: 281 LSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIV-QLTK 339

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L +N L  +P +  + +  LQ LDLS N ++SLP  P    L  LQ LYL   QL
Sbjct: 340 LQSLDLGSNQLSSLPPEIVQ-LTNLQSLDLSSNQLSSLP--PEIVQLTKLQSLYLSSNQL 396

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
              P +I++L +L+ LDL  N L S+P   + L++L +LDL  N +  +PPE++ 
Sbjct: 397 SSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPV-PIPPEILG 450



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 147/425 (34%), Positives = 214/425 (50%), Gaps = 17/425 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ L L  N +  L   +  L  L  L++  N+LS LP  IG+L  L++L +  N 
Sbjct: 37  QLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQ 96

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  T L       NQL  LP  +G+  NL      +N ++SLP +    + +
Sbjct: 97  LSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNL 156

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+L+ L    I   T L  L  S+N L+ +P  I  L++L  LDL  N++ S+
Sbjct: 157 QSLDLGSNQLSSLPPE-IGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSL 215

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P        L    +G+N LS+LP E+ +L+KL +LDL SNQL     E  QL  L  LD
Sbjct: 216 PPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLD 275

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS+N LS LPPEI ++T L+ L L+ N L +L   +V      L K     L  N+ S  
Sbjct: 276 LSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQ-----LTKLQSLDLGSNQLSSL 330

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I   T+L    + L L    LS++P EI +   +  LDLS N +  LPPE+  
Sbjct: 331 PPE----IVQLTKL----QSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQ 382

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
              LQ+L LS N++   P  I+  L+ L  L L +N L  +P +  + +  L+ LDL  N
Sbjct: 383 LTKLQSLYLSSNQLSSLPPEIV-QLTKLQSLDLGSNQLSSLPRE-IRQLSNLKKLDLRRN 440

Query: 462 IASLP 466
              +P
Sbjct: 441 PVPIP 445



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/450 (34%), Positives = 216/450 (48%), Gaps = 66/450 (14%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S+  +  +P EIG  T L      SNQL  LP  +G+  NL      +N ++SLP +
Sbjct: 21  LDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPE 80

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +   + +  L + GN                       N L+ +P  IG L+ L  L L 
Sbjct: 81  IGQLTNLQTLHL-GN-----------------------NQLSSLPPEIGQLTNLQSLHLW 116

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++ S+P  I    +L    + +N LS+LP E G+L+ L +LDL SNQL     E  QL
Sbjct: 117 INQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQL 176

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            +L  LDLS N LS LPPEI ++T L+ L L  N L +L       P    L  L+S   
Sbjct: 177 TKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSL------PPEFGQLTKLQS--- 227

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                      L L    LS++P EI +  ++  LDL  N +  
Sbjct: 228 ---------------------------LDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSS 260

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LPPE+    +LQ+L LS N++   P  I+  L+ L  L L +N L  +P +  + +  LQ
Sbjct: 261 LPPEIVQLTNLQSLDLSSNQLSSLPPEIV-QLTKLQSLYLSSNQLSSLPPEIVQ-LTKLQ 318

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N ++SLP  P    L  LQ L L   QL   P +I++L  L+ LDLS N L S+
Sbjct: 319 SLDLGSNQLSSLP--PEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSL 376

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P     LT L  L LS N +S+LPPE+V +
Sbjct: 377 PPEIVQLTKLQSLYLSSNQLSSLPPEIVQL 406



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 193/385 (50%), Gaps = 43/385 (11%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++++LD+    LT+L    I   T L  L    N L+ +P  IG L+ L  L L  N++ 
Sbjct: 17  EVTELDLSYKGLTILPPE-IGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLS 75

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           S+P  I    +L   ++GNN LS+LP E+G+L+ L +L L  NQL     E  QL  L  
Sbjct: 76  SLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQS 135

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDL +N LS LPPE G++T L+ L L  N L +L                    PE    
Sbjct: 136 LDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLP-------------------PE---- 172

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                    I   T+L    + L L    LS++P EI +  ++  LDL  N +  LPPE 
Sbjct: 173 ---------IGQLTKL----QSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEF 219

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
                LQ+L L  N++   P  I+  L+ L  L L +N L  +P +  + +  LQ LDLS
Sbjct: 220 GQLTKLQSLDLGSNQLSSLPPEIV-QLTKLQSLDLGSNQLSSLPPEIVQ-LTNLQSLDLS 277

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N ++SLP  P    L  LQ LYL   QL   P +I++L +L+ LDL  N L S+P    
Sbjct: 278 SNQLSSLP--PEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIV 335

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
            LT L  LDL  N +S+LPPE+V +
Sbjct: 336 QLTKLQSLDLGSNQLSSLPPEIVQL 360



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/407 (34%), Positives = 205/407 (50%), Gaps = 43/407 (10%)

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           +++   S   +T LP ++   + +  L ++ N+L+ L    I   T L  L    N L+ 
Sbjct: 18  VTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPK-IGQLTNLQTLHLRSNQLSS 76

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  IG L+ L  L L  N++ S+P  I    +L   ++  N LS+LP E+G+L+ L +L
Sbjct: 77  LPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSL 136

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           DL SNQL     E  QL  L  LDL +N LS LPPEIG++T L+ L L+ N L +L    
Sbjct: 137 DLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLP--- 193

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                           PE             I   T+L    + L L    LS++P E  
Sbjct: 194 ----------------PE-------------IVQLTKL----QSLDLRSNQLSSLPPEFG 220

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +  ++  LDL  N +  LPPE+     LQ+L L  N++   P  I+  L++L  L L +N
Sbjct: 221 QLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIV-QLTNLQSLDLSSN 279

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L  +P +  + +  LQ L LS N ++SLP  P    L  LQ L L   QL   P +I++
Sbjct: 280 QLSSLPPEIVQ-LTKLQSLYLSSNQLSSLP--PEIVQLTKLQSLDLGSNQLSSLPPEIVQ 336

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L +L+ LDL  N L S+P     LT+L  LDLS N +S+LPPE+V +
Sbjct: 337 LTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQL 383


>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
 gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
          Length = 694

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 172/583 (29%), Positives = 274/583 (46%), Gaps = 77/583 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEA--------------GEGDKWWEAVDL 47
           D + K AR +G+LNL+N+ +  VP  ++ N +EA               E D WW  V L
Sbjct: 104 DTLWKLARKTGTLNLTNKGMARVPERLF-NINEADADTKKRTLEQLSINEEDAWWNQVPL 162

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
             L L+ N +  +   + NL  LTVL +  N L ELP  IG+L  L  L++S N + ++P
Sbjct: 163 NNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNLSHNKLKELP 222

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
            ++ S   L   + S N+ +EL   +     L    A NN I SLP  +    +++ L +
Sbjct: 223 PDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLL 282

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N +  L  +++   + L +L   KN L  +PE +G L +L  L +  N I  +P +  
Sbjct: 283 ANNHIKELPPDIVYMRS-LQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELP-NFE 340

Query: 228 GCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           G   L+E +  NN +  +P EL + L  L  LDL  N++ +   E C LR L+ LD++NN
Sbjct: 341 GNEMLSELHASNNYIDHVPKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNN 400

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           S+S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R    E ++     
Sbjct: 401 SISVLPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERADGGA-- 458

Query: 346 EDL----------------------ITMATRLSVTSK-ELSLEGMNLSAIPSEIWEAG-- 380
           EDL                      +T   +L  T    ++LEG  L+ +P+ ++E    
Sbjct: 459 EDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEG--LTDVPTHVFELASE 516

Query: 381 -EITKLDLSRNSIQELPPELSSCASLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
            ++  +D +RN +  LP  L   + L T L+LS N I + P   ++  + ++ L L NN 
Sbjct: 517 EKVHVVDFARNHLSTLPKGLQHMSDLVTELVLSHNVINNVP-PFISQFTRITFLNLSNNL 575

Query: 439 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           ++ +P                         P F  L  L+EL +   +    P  +  LQ
Sbjct: 576 IKDLP-------------------------PEFGLLNTLRELNIANNRFEALPNALYELQ 610

Query: 499 QLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
            L IL  S N +++I   G +NL  L+ LDL +NNI  +PP L
Sbjct: 611 GLEILIASDNQIKAINVAGLQNLPRLSTLDLRNNNIEYVPPTL 653



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 159/358 (44%), Gaps = 49/358 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ SN  +  VP E+ +N               L+ L L  N I +L +++  L  L  L
Sbjct: 348 LHASNNYIDHVPKELCENLPH------------LKILDLRDNKITQLPDEVCLLRNLNRL 395

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI-------------GSATALVKFD 120
           ++++N +S LP  +  L  L SL V  N I  I  +I               A A  + D
Sbjct: 396 DITNNSISVLPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERAD 455

Query: 121 CSSNQLKELPSSLGRCL----------NLSD-FKASNN--------CITSLPE---DLAD 158
             +  L    S+ G  L          N++D +K  +          +T +P    +LA 
Sbjct: 456 GGAEDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEGLTDVPTHVFELAS 515

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             K+  +D   N L+ L   L     ++TEL+ S N++N +P  I   +R+  L+L  N 
Sbjct: 516 EEKVHVVDFARNHLSTLPKGLQHMSDLVTELVLSHNVINNVPPFISQFTRITFLNLSNNL 575

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           I  +P       +L E  + NN   ALP  L +L  L  L    NQ+K   V   Q   R
Sbjct: 576 IKDLPPEFGLLNTLRELNIANNRFEALPNALYELQGLEILIASDNQIKAINVAGLQNLPR 635

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LS LDL NN++  +PP +G +T +  L L GNP R  R  ++   T +++ YLR R+P
Sbjct: 636 LSTLDLRNNNIEYVPPTLGNLTNITHLELVGNPFRQPRHQILMKGTDSIMSYLRDRIP 693



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +  LDLS N++  + P++ +  +L  L L  N + + P  I   L  L  L L +
Sbjct: 157 WNQVPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQI-GKLEKLVRLNLSH 215

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L+++P D +                         SLP L+ L +   +  E   DI  
Sbjct: 216 NKLKELPPDLY-------------------------SLPELRHLNISHNEFEELNPDISN 250

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   N++ S+P G   L  LT L L++N+I  LPP++V +
Sbjct: 251 LHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYM 297


>gi|380014404|ref|XP_003691222.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           florea]
          Length = 602

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 277/566 (48%), Gaps = 63/566 (11%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR +G+LNLS+R L  VPN V+                 D   E ++WWE   L+ 
Sbjct: 30  IIISARKNGNLNLSSRGLFTVPNRVWTINDLTEEEIRNLHVELDYVHENERWWEQEPLKM 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N+++ +   +  L  LT L + +N L +LP  IG L  L+ L++S N + K+P E
Sbjct: 90  LDLSCNSLKAIDSKVECLTELTTLYLHNNLLEDLPVEIGNLKKLEILNLSNNKLEKLPYE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
               T L +    +N +K+L  + G  + L+    S N +  LP  +    ++  LD+  
Sbjct: 150 FYKLTELHQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLIELPIGMGYLVRLVSLDLNH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  +SGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNDLEMLP-PLGELRKVETVMLQTNKLTTFP-DMSGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N +
Sbjct: 267 IQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKI 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTT-- 344
           + +P  IG M  +++ ++ GN ++ +R  ++   T  +LK+++  L   N DS+   T  
Sbjct: 327 TLIPEHIGLMPNIKQFIIDGNDVKNIRMDIIRCGTSRILKHIQQGLKSTNLDSKRHVTLN 386

Query: 345 -----KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELP 396
                  D  TM      ++K LSL G NL+ IP E+ E     ++  +DLSRN    LP
Sbjct: 387 ASTNIYPDRYTMH-----STKLLSLAGQNLTEIPQEVLENACKADVGTVDLSRNKFSTLP 441

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            EL                      I+T ++    LKL +N L  +P    +    LQIL
Sbjct: 442 DELH---------------------IITKVAD---LKLTSNQLTHIPEWICEKYKYLQIL 477

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           DLS N + SLP N     L +LQEL +   + +E P  I  +  L IL  + N + +I  
Sbjct: 478 DLSKNCLESLPFN--IGLLKYLQELNISFNRYKEIPESIYDVDSLEILIANDNLITNIDI 535

Query: 516 -GFKNLTSLTELDLSDNNISALPPEL 540
              + L  L  L+L++NNI  +PPEL
Sbjct: 536 LSLQKLQKLVILNLANNNIGYIPPEL 561



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 63/331 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++SHNK++ +P  IG +  +K   +  N +  I
Sbjct: 293 LKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNI 352

Query: 107 PDEI---GSATAL-----------------VKFDCSSN-------------------QLK 127
             +I   G++  L                 V  + S+N                    L 
Sbjct: 353 RMDIIRCGTSRILKHIQQGLKSTNLDSKRHVTLNASTNIYPDRYTMHSTKLLSLAGQNLT 412

Query: 128 ELPSSL--GRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           E+P  +    C  ++     S N  ++LP++L   +K++ L +  N+LT +   +   + 
Sbjct: 413 EIPQEVLENACKADVGTVDLSRNKFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYK 472

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  SKN L  +P  IG L  L  L++  NR   IP SI    SL E  + N+ L  
Sbjct: 473 YLQILDLSKNCLESLPFNIGLLKYLQELNISFNRYKEIPESIYDVDSL-EILIANDNL-- 529

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                  ++ +  L L   Q           +L +L+L+NN++  +PPE+G +  LR L 
Sbjct: 530 -------ITNIDILSLQKLQ-----------KLVILNLANNNIGYIPPELGNLKNLRNLS 571

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 572 LSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 184/423 (43%), Gaps = 81/423 (19%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L  L L HN +++L  DL N+  L  LN S+N L  LP  +GEL  ++++ +  N + 
Sbjct: 200 VRLVSLDLNHNMLKELPPDLTNMRALQKLNASYNDLEMLPP-LGELRKVETVMLQTNKLT 258

Query: 105 KIPDEIG---------SATALVKFDCS--------------SNQLKELPSSLGRCLNLSD 141
             PD  G         +   + + D S              +NQ++ +P  + + + L  
Sbjct: 259 TFPDMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEI 318

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-----MLTELIASKNLL 196
           F  S+N IT +PE +     + +  ++GN +  +  ++I   T      + + + S NL 
Sbjct: 319 FDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNIRMDIIRCGTSRILKHIQQGLKSTNLD 378

Query: 197 NGMPETIGSLSRLI--RLDLHQNRILS--------IPSSI--SGC-CSLAEFYMGNNALS 243
           +    T+ + + +   R  +H  ++LS        IP  +  + C   +    +  N  S
Sbjct: 379 SKRHVTLNASTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLENACKADVGTVDLSRNKFS 438

Query: 244 ALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LP EL  ++K+  L L SNQL    E+  E  +  L +LDLS N L  LP  IG +  L
Sbjct: 439 TLPDELHIITKVADLKLTSNQLTHIPEWICEKYKY-LQILDLSKNCLESLPFNIGLLKYL 497

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           ++L ++ N  + +  S+ +  +  +L                   ++LIT    LS+   
Sbjct: 498 QELNISFNRYKEIPESIYDVDSLEIL----------------IANDNLITNIDILSLQKL 541

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           +                   ++  L+L+ N+I  +PPEL +  +L+ L LS N  K    
Sbjct: 542 Q-------------------KLVILNLANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQ 582

Query: 421 AIL 423
           AIL
Sbjct: 583 AIL 585



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 41/303 (13%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+L A+ +++  L++L TL LH+N L++  VE   L+ L +L+LSNN L  LP E  K+T
Sbjct: 95  NSLKAIDSKVECLTELTTLYLHNNLLEDLPVEIGNLKKLEILNLSNNKLEKLPYEFYKLT 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L  N ++ L         PA   ++                     M T L ++
Sbjct: 155 ELHQLSLKNNNIKQL--------DPAFGDFI---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                    NL  +P  +     +  LDL+ N ++ELPP+L++  +LQ L  S N ++  
Sbjct: 186 YN-------NLIELPIGMGYLVRLVSLDLNHNMLKELPPDLTNMRALQKLNASYNDLEML 238

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P   L  L  +  + L  N L   P         L+IL L+ N  +  +      +  L+
Sbjct: 239 PP--LGELRKVETVMLQTNKLTTFPD--MSGCIQLRILHLADNNITEIDMSCLEGVGQLK 294

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   Q+   P +I++L  L I DLS N +  IPE    + ++ +  +  N++  +  
Sbjct: 295 TLTLGNNQIESIPEEIIKLVYLEIFDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNIRM 354

Query: 539 ELV 541
           +++
Sbjct: 355 DII 357



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WE   +  LDLS NS++ +  ++     L TL L  N ++D P  I  +L  L  L L N
Sbjct: 82  WEQEPLKMLDLSCNSLKAIDSKVECLTELTTLYLHNNLLEDLPVEI-GNLKKLEILNLSN 140

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L ++P + +K                         L  L +L L+   +++       
Sbjct: 141 NKLEKLPYEFYK-------------------------LTELHQLSLKNNNIKQLDPAFGD 175

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  LDLS N+L  +P G   L  L  LDL+ N +  LPP+L ++
Sbjct: 176 FIMLTYLDLSYNNLIELPIGMGYLVRLVSLDLNHNMLKELPPDLTNM 222


>gi|383849806|ref|XP_003700527.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Megachile rotundata]
          Length = 604

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 166/587 (28%), Positives = 267/587 (45%), Gaps = 105/587 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWE------ 43
           I+ +AR +G+LNLS+R L  VPN+V+                 D   E ++WWE      
Sbjct: 30  IIISARKTGNLNLSSRGLSTVPNKVWSINELTDEEVKELHYELDYVHENERWWEQELLKT 89

Query: 44  ---------AVD--------LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
                     +D        L  L+L  N +E L  ++ NL  L VLN+S+NKL +LP  
Sbjct: 90  LDLSFNSLVVIDSKIECLSELTTLLLHDNLLENLPPEIGNLKKLEVLNLSNNKLKQLPHQ 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
             +L+ L+ L +  N + K+   IG    L   D S+N L ELP  +G  + L     S+
Sbjct: 150 FYQLNELRELCLKNNKLNKLSPAIGDLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSH 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG-S 205
           N +T LP DL +   + KLD   N+L VL    +     +  ++   N L   P+  G +
Sbjct: 210 NLLTELPPDLTNIRALQKLDASCNQLEVLPP--MGDLRKVETVMLQTNKLTTFPDMSGCT 267

Query: 206 LSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           L R+  L L  N I  I  S + G   L    +GNN +  +P ++ K+            
Sbjct: 268 LLRI--LHLADNNITEIDMSCLEGVGQLKVLTLGNNKIETIPEDIIKM------------ 313

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                     + L + DLS+N L+ +P  +G M  L++ ++ GN ++ +R+ ++   TP 
Sbjct: 314 ----------VYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRADIIRCGTPR 363

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATR-------LSVTSKELSLEGMNLSAIPSEIW 377
           +LK++R  +    +S    TKE +I+ A +          ++K LSL G+NL+ +P E+ 
Sbjct: 364 ILKHIRQSI----ESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLNLTELPQEVL 419

Query: 378 E---AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E     ++  +DLSRN + ELP ++   A +  L L+ N++   P+ I      L  L L
Sbjct: 420 ENACKADVGTVDLSRNKLSELPDQMCVIAKVADLKLTSNELTHLPEWIGEKYKHLQALDL 479

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
             N L  +PS                           S L +L+EL +   + ++ P  +
Sbjct: 480 SRNFLESLPS-------------------------TLSLLKYLRELNISFNRYKKIPESV 514

Query: 495 LRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPEL 540
             +  L IL  + NS+  I     + L  L  L+L +NNI  +PPEL
Sbjct: 515 YDIDSLEILIANDNSITDIDVPSLQKLQKLAILNLGNNNIGYVPPEL 561



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 219/483 (45%), Gaps = 106/483 (21%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLSN  L+ +P++ Y             +  +L++L L +N + KL   + +L +LT L
Sbjct: 136 LNLSNNKLKQLPHQFY-------------QLNELRELCLKNNKLNKLSPAIGDLIMLTHL 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N LSELP  +G L  LKSLD+S N + ++P ++ +  AL K D S NQL+ LP  +
Sbjct: 183 DLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDLTNIRALQKLDASCNQLEVLPP-M 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT----------------VLSN 177
           G    +       N +T+ P D++ C+ +  L +  N +T                 L N
Sbjct: 242 GDLRKVETVMLQTNKLTTFP-DMSGCTLLRILHLADNNITEIDMSCLEGVGQLKVLTLGN 300

Query: 178 NLIAS-------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC- 229
           N I +          L     S N L  +P  +G +  L +  ++ N + +I + I  C 
Sbjct: 301 NKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRADIIRCG 360

Query: 230 ---------------------CSLAE---------FYMGNNAL--------SALPAEL-- 249
                                C +++         + M +  L        + LP E+  
Sbjct: 361 TPRILKHIRQSIESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLNLTELPQEVLE 420

Query: 250 -GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLT 306
               + +GT+DL  N+L E   + C + +++ L L++N L+ LP  IG K   L+ L L+
Sbjct: 421 NACKADVGTVDLSRNKLSELPDQMCVIAKVADLKLTSNELTHLPEWIGEKYKHLQALDLS 480

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL----ITMATRLSVTSKE 361
            N L +L S+L      +LLKYLR   +  N   +   +  D+    I +A   S+T  +
Sbjct: 481 RNFLESLPSTL------SLLKYLRELNISFNRYKKIPESVYDIDSLEILIANDNSITDID 534

Query: 362 L-SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           + SL+ +   AI            L+L  N+I  +PPEL +  ++++L LS N  K    
Sbjct: 535 VPSLQKLQKLAI------------LNLGNNNIGYVPPELGNLKNIRSLFLSGNLFKQPRQ 582

Query: 421 AIL 423
           AIL
Sbjct: 583 AIL 585



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 27/312 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + ED+  +  L + ++SHNKL+ +P+ +G +  LK   ++ N +  I
Sbjct: 293 LKVLTLGNNKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNI 352

Query: 107 PDEI---GS------------ATALVKFDC---SSNQLKELPSSLGRCLNLSDFKASNNC 148
             +I   G+            +T L   +C    +NQ         +   L      N  
Sbjct: 353 RADIIRCGTPRILKHIRQSIESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLN-- 410

Query: 149 ITSLPEDLAD--C-SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG- 204
           +T LP+++ +  C + +  +D+  NKL+ L + +      + +L  + N L  +PE IG 
Sbjct: 411 LTELPQEVLENACKADVGTVDLSRNKLSELPDQMCV-IAKVADLKLTSNELTHLPEWIGE 469

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
               L  LDL +N + S+PS++S    L E  +  N    +P  +  +  L  L  + N 
Sbjct: 470 KYKHLQALDLSRNFLESLPSTLSLLKYLRELNISFNRYKKIPESVYDIDSLEILIANDNS 529

Query: 265 LKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           + +  V + Q   +L++L+L NN++  +PPE+G +  +R L L+GN  +  R +++   T
Sbjct: 530 ITDIDVPSLQKLQKLAILNLGNNNIGYVPPELGNLKNIRSLFLSGNLFKQPRQAILAKST 589

Query: 323 PALLKYLRSRLP 334
             +L YLR R+P
Sbjct: 590 EEILAYLRDRIP 601



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 41/303 (13%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+L  + +++  LS+L TL LH N L+    E   L+ L VL+LSNN L  LP +  ++ 
Sbjct: 95  NSLVVIDSKIECLSELTTLLLHDNLLENLPPEIGNLKKLEVLNLSNNKLKQLPHQFYQLN 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR+L L  N L  L        +PA+                     DLI +       
Sbjct: 155 ELRELCLKNNKLNKL--------SPAI--------------------GDLIMLT------ 180

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L L   NLS +P  +     +  LDLS N + ELPP+L++  +LQ L  S N+++  
Sbjct: 181 --HLDLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDLTNIRALQKLDASCNQLEVL 238

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P   +  L  +  + L  N L   P        +L+IL L+ N  +  +      +  L+
Sbjct: 239 PP--MGDLRKVETVMLQTNKLTTFPD--MSGCTLLRILHLADNNITEIDMSCLEGVGQLK 294

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   ++   P DI+++  L I DLS N L  IP     + +L +  ++ N++  +  
Sbjct: 295 VLTLGNNKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRA 354

Query: 539 ELV 541
           +++
Sbjct: 355 DII 357



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 26/228 (11%)

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L   + R   ++++E S    ++I ++ R    +  L+L    LS +P+++W   E+T  
Sbjct: 11  LAVFKQRTKTDDNAELS----EVIIISAR---KTGNLNLSSRGLSTVPNKVWSINELTD- 62

Query: 386 DLSRNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
                 ++EL  EL              L+TL LS N +    D+ +  LS L+ L L +
Sbjct: 63  ----EEVKELHYELDYVHENERWWEQELLKTLDLSFNSLV-VIDSKIECLSELTTLLLHD 117

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L  +P +   ++  L++L+LS N +  LP    F  L  L+EL L+  +L +    I 
Sbjct: 118 NLLENLPPE-IGNLKKLEVLNLSNNKLKQLPHQ--FYQLNELRELCLKNNKLNKLSPAIG 174

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L  L  LDLS N+L  +P G   L  L  LDLS N ++ LPP+L ++
Sbjct: 175 DLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDLTNI 222


>gi|326493602|dbj|BAJ85262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 223

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 129/180 (71%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL+L G+ +  +P   WE  ++ KLDLS+N I++LP ELS C+SLQ LILS NKIK WP 
Sbjct: 1   ELNLSGLGVPNVPPAAWETSDVVKLDLSKNLIEDLPNELSLCSSLQALILSNNKIKKWPG 60

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            +++SL SL+ LKLDNNPL  + S   + +  L++LDLS N +SL E    SSLP L EL
Sbjct: 61  MVVSSLPSLTSLKLDNNPLAAISSTDVESLSKLEVLDLSGNASSLTEPSVISSLPQLHEL 120

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YLRRM+L+  P  + +L+ LRIL LSQN L +IPEG K+ ++L ELDLSDNNI+ALP EL
Sbjct: 121 YLRRMKLQGFPIGLFQLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSDNNITALPAEL 180



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 46/266 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   +  +P A  E   +  LD+S N I  +P+E+   ++L     S+N++K+ P  
Sbjct: 2   LNLSGLGVPNVPPAAWETSDVVKLDLSKNLIEDLPNELSLCSSLQALILSNNKIKKWPGM 61

Query: 133 LGRCL-NLSDFKASNNCITSLPE-DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L +L+  K  NN + ++   D+   SK+  LD+ GN  ++   ++I+S   L EL 
Sbjct: 62  VVSSLPSLTSLKLDNNPLAAISSTDVESLSKLEVLDLSGNASSLTEPSVISSLPQLHELY 121

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L G P  +  L  L  L L QN + +IP  I    +L E  + +N ++ALPAELG
Sbjct: 122 LRRMKLQGFPIGLFQLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSDNNITALPAELG 181

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L                                              +L+ L L GNPL
Sbjct: 182 LLEP--------------------------------------------SLQVLKLDGNPL 197

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPEN 336
           R++R +++   T A+L YL+ +LP N
Sbjct: 198 RSIRRTVLERGTKAVLSYLKEKLPSN 223



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 57/245 (23%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P      S +++LDL +N I  +P+ +S C SL    + NN +   P            
Sbjct: 12  VPPAAWETSDVVKLDLSKNLIEDLPNELSLCSSLQALILSNNKIKKWPG----------- 60

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSL 317
                      V +    L+ L L NN L+ +   ++  ++ L  L L+GN         
Sbjct: 61  ----------MVVSSLPSLTSLKLDNNPLAAISSTDVESLSKLEVLDLSGN--------- 101

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                                  +S T+  +I+   +L     EL L  M L   P  ++
Sbjct: 102 ----------------------ASSLTEPSVISSLPQL----HELYLRRMKLQGFPIGLF 135

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   +  L LS+N +  +P  +   ++L  L LS N I   P  +     SL  LKLD N
Sbjct: 136 QLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSDNNITALPAELGLLEPSLQVLKLDGN 195

Query: 438 PLRQV 442
           PLR +
Sbjct: 196 PLRSI 200



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 16/165 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE-DLRNLPLLTV 72
           L+LS   + D+PNE+                  LQ LIL++N I+K     + +LP LT 
Sbjct: 25  LDLSKNLIEDLPNELSL-------------CSSLQALILSNNKIKKWPGMVVSSLPSLTS 71

Query: 73  LNVSHNKLSELPAA-IGELHMLKSLDVSFN-SIMKIPDEIGSATALVKFDCSSNQLKELP 130
           L + +N L+ + +  +  L  L+ LD+S N S +  P  I S   L +      +L+  P
Sbjct: 72  LKLDNNPLAAISSTDVESLSKLEVLDLSGNASSLTEPSVISSLPQLHELYLRRMKLQGFP 131

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
             L +  +L     S N +T++PE + D S + +LD+  N +T L
Sbjct: 132 IGLFQLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSDNNITAL 176



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +LP L  L +   KL   P  + +L  L+ L +S N +  IP+ I   +ALV+ D S 
Sbjct: 111 ISSLPQLHELYLRRMKLQGFPIGLFQLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSD 170

Query: 124 NQLKELPSSLG 134
           N +  LP+ LG
Sbjct: 171 NNITALPAELG 181


>gi|348686389|gb|EGZ26204.1| hypothetical protein PHYSODRAFT_555679 [Phytophthora sojae]
          Length = 785

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 171/598 (28%), Positives = 268/598 (44%), Gaps = 87/598 (14%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L+ AR SGSLNLS+R  +  P EV++ ++  GE ++ WE   L+KL L++N+I +L   +
Sbjct: 28  LRLARQSGSLNLSSRDFQSFPEEVFRLYELLGEDERSWECAVLRKLDLSYNDISELPTQV 87

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSS 123
             L  L    + HN+L  LP A+  L  L SLD+S N +   +P+++G    L +     
Sbjct: 88  ETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEG 147

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L +LP  +G   +L   K  +N + +LP  +     +  L    N +  L  +   S 
Sbjct: 148 NKLTKLPECIGGLSHLEVLKVESNQLRTLPSTIGQLRNLKTLSAHSNLIVELPASF-GSL 206

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L  L   KN L    +    L  +  +DL QN++   P       SL + ++G N L 
Sbjct: 207 TGLLTLDLKKNSLVTTGDAFIGLVSIKFIDLRQNKLEVFPMLPENNSSLDQLFLGFNTLR 266

Query: 244 ALPAE--LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
            +P E  L     L  LD+  N+L+    +  QL RL  LD++NN L  LP  +G +  L
Sbjct: 267 EIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLKYL 326

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL----- 355
             LL+ GNPLR++R S+++G T  L KYLR+R    E  +A   + D  T+  R      
Sbjct: 327 DHLLVDGNPLRSVRRSIISGGTEPLKKYLRTRGGPPEGVDAMEEEVDEFTIRQREIEQDE 386

Query: 356 ----------------SVTSKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQ 393
                           +  S  L L  M    +P ++  AG+      + +L+LS+N + 
Sbjct: 387 PMAEEPPAEDEYLFRNAAASGSLQLVDMKFQQLPVQLGAAGKYRFGETLLQLNLSKNHLV 446

Query: 394 ELPPELSSCASLQTLILSRNKIK------------------------DWPDAILTSLS-- 427
           ELP  +    SL+TL+  +  +K                        D  DA+L + +  
Sbjct: 447 ELPVAIGELTSLRTLVAEQCGLKSIHPSIAMIPSLERLRVGKNSLTTDAIDAMLVAGNNA 506

Query: 428 ----SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
               SL  L L NN L  +P    + +  +  L LS+N     +  P+SS          
Sbjct: 507 SICLSLKELDLRNNILTDIPQK-LQYLETMDTLLLSFNRIRALDRFPWSS---------- 555

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
                        +QQL +L +S N L+S+      +  LT L L +N +  +P EL 
Sbjct: 556 -------------MQQLSVLSISDNRLESL-GAVHQIPKLTSLSLENNELRQIPAELA 599



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 180/474 (37%), Gaps = 107/474 (22%)

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L K D S N + ELP+ +     L  FK  +N +  LP                    
Sbjct: 68  AVLRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLP-------------------- 107

Query: 174 VLSNNLIASWTM--LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                 +A W +  LT L  S N L G +PE +G L +L  L L  N++  +P  I G  
Sbjct: 108 ------LAVWNLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEGNKLTKLPECIGGLS 161

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 290
            L    + +N L  LP+ +G+L  L TL  HSN + E                      L
Sbjct: 162 HLEVLKVESNQLRTLPSTIGQLRNLKTLSAHSNLIVE----------------------L 199

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P   G +T L  L L  N L T   + +   +   +K++  R            K ++  
Sbjct: 200 PASFGSLTGLLTLDLKKNSLVTTGDAFIGLVS---IKFIDLR----------QNKLEVFP 246

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIW--EAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           M    + +  +L L    L  IP EI       +T LD+  N +Q L  ++     L+TL
Sbjct: 247 MLPENNSSLDQLFLGFNTLREIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTL 306

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---------------------PSDGF 447
            ++ N + D P A L  L  L  L +D NPLR V                     P +G 
Sbjct: 307 DVTNNDLHDLP-AGLGYLKYLDHLLVDGNPLRSVRRSIISGGTEPLKKYLRTRGGPPEGV 365

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR------------MQLREAPTDIL 495
            D    ++ + +     + ++ P +  P  ++ YL R            M+ ++ P  + 
Sbjct: 366 -DAMEEEVDEFTIRQREIEQDEPMAEEPPAEDEYLFRNAAASGSLQLVDMKFQQLPVQLG 424

Query: 496 RLQQLRI------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              + R       L+LS+N L  +P     LTSL  L      + ++ P +  +
Sbjct: 425 AAGKYRFGETLLQLNLSKNHLVELPVAIGELTSLRTLVAEQCGLKSIHPSIAMI 478



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 41/263 (15%)

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSA------TALVKFDCSSNQLKELPSSLGRCLN 138
           AA G L ++   D+ F    ++P ++G+A        L++ + S N L ELP ++G   +
Sbjct: 404 AASGSLQLV---DMKFQ---QLPVQLGAAGKYRFGETLLQLNLSKNHLVELPVAIGELTS 457

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------VLSNNLIASWTMLTELIA 191
           L    A    + S+   +A    + +L V  N LT       +++ N  +    L EL  
Sbjct: 458 LRTLVAEQCGLKSIHPSIAMIPSLERLRVGKNSLTTDAIDAMLVAGNNASICLSLKELDL 517

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N+L  +P+ +  L  +  L L  NRI                     AL   P     
Sbjct: 518 RNNILTDIPQKLQYLETMDTLLLSFNRI--------------------RALDRFP--WSS 555

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + +L  L +  N+L+         +L+ L L NN L  +P E+     LR L L GNP R
Sbjct: 556 MQQLSVLSISDNRLESLGAVHQIPKLTSLSLENNELRQIPAELALCENLRALYLAGNPQR 615

Query: 312 TLRSSLVNGPTPALLKYLRSRLP 334
            +R+ ++N  T A+LKYLR+RLP
Sbjct: 616 GIRTHILNNGTEAVLKYLRNRLP 638



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 41/317 (12%)

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
           C  L +  +  N +S LP ++  L  L +  +  N+L+   +    L  L+ LDLSNN L
Sbjct: 67  CAVLRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSNNEL 126

Query: 288 SG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            G LP ++GK+  LR+L L GN L                    ++LPE           
Sbjct: 127 EGCLPEQLGKLDKLRELGLEGNKL--------------------TKLPE----------- 155

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I   + L V    L +E   L  +PS I +   +  L    N I ELP    S   L 
Sbjct: 156 -CIGGLSHLEV----LKVESNQLRTLPSTIGQLRNLKTLSAHSNLIVELPASFGSLTGLL 210

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
           TL L +N +    DA +  L S+  + L  N L   P     +  + Q+  L +N +  +
Sbjct: 211 TLDLKKNSLVTTGDAFI-GLVSIKFIDLRQNKLEVFPMLPENNSSLDQLF-LGFNTLREI 268

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           PE    +    L  L +R  +L+     I +L +L+ LD++ N L  +P G   L  L  
Sbjct: 269 PEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLKYLDH 328

Query: 526 LDLSDNNISALPPELVS 542
           L +  N + ++   ++S
Sbjct: 329 LLVDGNPLRSVRRSIIS 345


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 241/470 (51%), Gaps = 26/470 (5%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +  +P EIG    L K + + N+L  LP  +G+
Sbjct: 153 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGK 212

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +   + N + +LPE++     +  L++  N+LT L    I +   L EL    N 
Sbjct: 213 LQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKE-IGNLQKLQELYLGDNQ 271

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
              +P+ IG L +L  LDL  N++ ++P  I     L + Y+ +N L+ LP E+ KL  L
Sbjct: 272 FATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNL 331

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L++NQL     E  +L +L  L L NN L+ LP EIGK+  L+ L L+ N L TL 
Sbjct: 332 QWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLP 391

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L++L+    EN  ++ +T  +++  +        +EL L+   L+ +P 
Sbjct: 392 KEI------GKLQHLQELHLEN--NQLTTLPKEIGKLQ-----NLQELRLDYNRLTTLPE 438

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +  ++ KL  S N    +P E+ +  +LQ L L  N++   P  I    +       
Sbjct: 439 EIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLS 498

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREA 490
           DN  L  +P    K+I  LQ L L Y     + +LP+      L +LQELYLR  QL   
Sbjct: 499 DNQ-LATLP----KEIGKLQNLQLLYLSDNQLTTLPKE--IGKLQNLQELYLRDNQLTTL 551

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I  LQ L++L+L+ N L ++P+   NL +L  L+L+ N ++ LP E+
Sbjct: 552 PKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEI 601



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/488 (32%), Positives = 246/488 (50%), Gaps = 20/488 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  LN++ N+L+ LP  IG+L  L+ L ++ N +  
Sbjct: 169 NLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLAN 228

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   +   NQL  LP  +G    L +    +N   +LP+ +    K+ +L
Sbjct: 229 LPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQEL 288

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L +L    N L  +PE I  L  L  L L+ N++ ++P  
Sbjct: 289 DLGINQLTTLPKE-IEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKE 347

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   ++ NN L+ LP E+GKL  L  L L +NQL     E  +L+ L  L L N
Sbjct: 348 IGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLEN 407

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L++L L  N L TL   +        LK L S       ++ +T 
Sbjct: 408 NQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEI---EKLQKLKKLYS-----SGNQFTTV 459

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E++  +        + L+L    L+++P EI     +  L LS N +  LP E+    +
Sbjct: 460 PEEIWNLQ-----NLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQN 514

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           LQ L LS N++   P  I   L +L  L L +N L  +P +   ++  LQ+L+L++N + 
Sbjct: 515 LQLLYLSDNQLTTLPKEI-GKLQNLQELYLRDNQLTTLPKE-IGNLQNLQVLNLNHNRLT 572

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +LP+     +L +LQ L L   +L   P +I +LQ L++L L  N L ++PE    L +L
Sbjct: 573 TLPKE--IGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNL 630

Query: 524 TELDLSDN 531
            ELDL  N
Sbjct: 631 KELDLVGN 638



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 213/444 (47%), Gaps = 26/444 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDE--------AGEGDKWWEAVDLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E        A   ++  +  +LQ L L  N +  L +
Sbjct: 195 KLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPK 254

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ NL  L  L +  N+ + LP AIG+L  L+ LD+  N +  +P EI     L +    
Sbjct: 255 EIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLY 314

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SN+L  LP  + +  NL     +NN +T+LP+++    K+  L +E N+LT L    I  
Sbjct: 315 SNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGK 373

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S N L  +P+ IG L  L  L L  N++ ++P  I    +L E  +  N L
Sbjct: 374 LQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRL 433

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL KL  L    NQ      E   L+ L  L+L +N L+ LP EIG +  L+
Sbjct: 434 TTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQ 493

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L+ N L TL   +       LL YL        D++ +T  +++  +        +E
Sbjct: 494 LLYLSDNQLATLPKEIGKLQNLQLL-YL-------SDNQLTTLPKEIGKLQ-----NLQE 540

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI     +  L+L+ N +  LP E+ +  +LQ L L+ N++   P+ 
Sbjct: 541 LYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEE 600

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSD 445
           I   L +L  L LDNN L  +P +
Sbjct: 601 I-GKLQNLQLLHLDNNQLTTLPEE 623



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 180/363 (49%), Gaps = 23/363 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L  N +  L E++  L  L  L +++N+L+ LP  IG+L  L++L +  N +  +
Sbjct: 308 LQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 367

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L     S+NQL  LP  +G+  +L +    NN +T+LP+++     + +L 
Sbjct: 368 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELR 427

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT L    I     L +L +S N    +PE I +L  L  L+L+ N++ S+P  I
Sbjct: 428 LDYNRLTTLPEE-IEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 486

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L   Y+ +N L+ LP E+GKL  L  L L  NQL     E  +L+ L  L L +N
Sbjct: 487 GNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDN 546

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG +  L+ L L  N L TL   + N     +L    +RL         TT 
Sbjct: 547 QLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRL---------TTL 597

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN--------SIQELPP 397
            + I     L +    L L+   L+ +P EI +   + +LDL  N         IQ+L P
Sbjct: 598 PEEIGKLQNLQL----LHLDNNQLTTLPEEIGKLQNLKELDLVGNPSLIGQKEKIQKLLP 653

Query: 398 ELS 400
            +S
Sbjct: 654 NVS 656



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 1/176 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++ W   +LQ L L  N +  L +++ NL  L +L +S N+L+ LP  IG+L  L+ L +
Sbjct: 461 EEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYL 520

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EIG    L +     NQL  LP  +G   NL     ++N +T+LP+++ +
Sbjct: 521 SDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGN 580

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
              +  L++  N+LT L    I     L  L    N L  +PE IG L  L  LDL
Sbjct: 581 LQNLQVLNLNHNRLTTLPEE-IGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDL 635


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/460 (33%), Positives = 233/460 (50%), Gaps = 20/460 (4%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA IG L  L+ LD+  + +  +P EIG  T+L K +   NQL  +P+ +G+   L   
Sbjct: 19  VPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 78

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +   + +TS+P ++   + + +L++ GN+LT +    I   T L +L    N L  +P  
Sbjct: 79  RLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAE-IGQLTSLEKLNLYCNQLTIVPAE 137

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L RL+L  N++ S+P+ I    SL E  +G N L++LP E+ +L+ L  L L  
Sbjct: 138 IGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG 197

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL  L  LDL NN L+ +P EIG++ +L KL L  N L ++        
Sbjct: 198 NQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASV-------- 249

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            PA +  L S    +      T+    I   T L+    EL L    L+ +P+EI +   
Sbjct: 250 -PAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLT----ELHLHINKLTRVPAEIGQLAS 304

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L L  N +  +P E+    SL+ L L  N++   P  I   L+SL  L L  N L  
Sbjct: 305 LVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEI-GQLASLERLLLYGNQLTS 363

Query: 442 VPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           VP++    +  L+ L L+ NI  S+P       L  L+ELYL   +L   P +I +L  L
Sbjct: 364 VPAE-IGQLTSLEWLGLNGNILTSVPAE--IGQLTSLKELYLHGNELTSVPAEIGQLTSL 420

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + L L  N L  +P     LTSLT L L+ N +S+LP E+
Sbjct: 421 QRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEI 460



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 43/493 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L ++ +  +  ++  L  L  LN+  N+L+ +PA IG+L +L+ L +  + +  +
Sbjct: 29  LRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSV 88

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LV+ +   N+L  +P+ +G+  +L       N +T +P ++   + + +L+
Sbjct: 89  PAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLN 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++GN+LT +    I   T LTEL   +N L  +P  I  L+ L  L L  N++ S+P+ I
Sbjct: 149 LDGNQLTSVPAE-IGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + NN L+++PAE+G+L+ L  L L +NQL     E  +L  L+ +DLS N
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFN 267

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P EIG++T+L +L L  N L                    +R+P      AS  +
Sbjct: 268 RLTSVPAEIGQLTSLTELHLHINKL--------------------TRVPAEIGQLASLVR 307

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                           L L+   L+++P+EI +   +  L L  N +  +P E+   ASL
Sbjct: 308 ----------------LRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASL 351

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L+L  N++   P  I   L+SL  L L+ N L  VP++    +  L+ L L  N + S
Sbjct: 352 ERLLLYGNQLTSVPAEI-GQLTSLEWLGLNGNILTSVPAE-IGQLTSLKELYLHGNELTS 409

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +P       L  LQ LYL   QL   P +I +L  L +L L+ N L S+P     LTS+ 
Sbjct: 410 VPAE--IGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVE 467

Query: 525 ELDLSDNNISALP 537
            LDL  N ++++P
Sbjct: 468 RLDLRCNELTSVP 480



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 204/432 (47%), Gaps = 52/432 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP E+              +   L+KL L  N +  +  ++  L LL  L
Sbjct: 101 LNLGGNRLTSVPAEI-------------GQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 147

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ +PA IG+L  L  LD+  N +  +P EI   T+L       NQL  +P+ +
Sbjct: 148 NLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L      NN +TS+P ++   + + KL ++ N+L  +    I   T LTE+  S 
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAE-IGRLTSLTEVDLSF 266

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L LH N++  +P+ I    SL    + NN L+++PAE+G+L+
Sbjct: 267 NRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLT 326

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L  N L+ +P EIG++T+L  L L GN L +
Sbjct: 327 SLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTS 386

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S                            KEL L G  L+++
Sbjct: 387 V---------PAEIGQLTSL---------------------------KELYLHGNELTSV 410

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   + +L L  N +  +P E+    SL  L L+ N++   P  I   L+S+  L
Sbjct: 411 PAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEI-GQLTSVERL 469

Query: 433 KLDNNPLRQVPS 444
            L  N L  VP+
Sbjct: 470 DLRCNELTSVPA 481



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 170/336 (50%), Gaps = 24/336 (7%)

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           ++P+ I    +L E  + N+ L+++PAE+G+L+ L  L+L+ NQL     E  QL  L  
Sbjct: 18  AVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLER 77

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------------VNGPT--PAL 325
           L L  + L+ +P EIG++T+L +L L GN L ++ + +             N  T  PA 
Sbjct: 78  LRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAE 137

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           +  L      N D    T+    I   T L+    EL L    L+++P+EIW+   +T L
Sbjct: 138 IGQLALLERLNLDGNQLTSVPAEIGQLTSLT----ELDLGRNKLTSLPTEIWQLTSLTCL 193

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            L  N +  +P E+   ASL+ L L  N++   P  I   L+SL  L+LDNN L  VP++
Sbjct: 194 HLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEI-GQLASLEKLRLDNNQLASVPAE 252

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  L  +DLS+N + S+P       L  L EL+L   +L   P +I +L  L  L 
Sbjct: 253 -IGRLTSLTEVDLSFNRLTSVPAE--IGQLTSLTELHLHINKLTRVPAEIGQLASLVRLR 309

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  N L S+P     LTSL  L L  N ++++P E+
Sbjct: 310 LDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEI 345



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 157/306 (51%), Gaps = 19/306 (6%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +G+    A+PAE+G+LS L  LDL+++QL     E  QL  L  L+L  N L+ +P EIG
Sbjct: 11  LGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIG 70

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L +L L G+ L ++         PA +  L S +  N      T+    I   T L
Sbjct: 71  QLALLERLRLGGSKLTSV---------PAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSL 121

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               ++L+L    L+ +P+EI +   + +L+L  N +  +P E+    SL  L L RNK+
Sbjct: 122 ----EKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKL 177

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P  I   L+SL+CL L  N L  VP++    +  L+ LDL  N + S+P       L
Sbjct: 178 TSLPTEIW-QLTSLTCLHLQGNQLTSVPAE-IGQLASLKGLDLYNNQLTSVPAE--IGQL 233

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L++L L   QL   P +I RL  L  +DLS N L S+P     LTSLTEL L  N ++
Sbjct: 234 ASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLT 293

Query: 535 ALPPEL 540
            +P E+
Sbjct: 294 RVPAEI 299


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 229/475 (48%), Gaps = 61/475 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQW 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   + +LDL +N +  LP E+    +LQ L L  N++   P  
Sbjct: 306 LDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 365

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L +L  L LDNN L  +P +  + +  LQ+L L  N +++LP+      L +LQ L
Sbjct: 366 I-EQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVL 421

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L   QL   P +I +LQ L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 422 ALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 214/397 (53%), Gaps = 20/397 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 273 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLH 332

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 333 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 383

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 384 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQL 438

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            +LQ L L  N++  +P  I   L +L  L L  NPL
Sbjct: 439 QNLQELCLDENQLTTFPKEI-RQLKNLQELHLYLNPL 474



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 214/445 (48%), Gaps = 43/445 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     L EL
Sbjct: 133 PKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+ L L  N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P  +  L++                            + L L    
Sbjct: 312 QLTIL---------PKEIGQLQN---------------------------LQRLDLHQNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +   + +L L  N +  LP E+    +L+ L L  N++   P  +L  L S
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL-RLQS 394

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L +N L  +P +    +  LQ+L L S  + +LP+      L +LQEL L   QL
Sbjct: 395 LQVLALGSNRLSTLPKE-IGQLQNLQVLALISNQLTTLPKE--IGQLQNLQELCLDENQL 451

Query: 488 REAPTDILRLQQLRILDLSQNSLQS 512
              P +I +L+ L+ L L  N L S
Sbjct: 452 TTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 192/394 (48%), Gaps = 43/394 (10%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLQNLQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L   
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL         P  + 
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIG 229

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L++                            K L+L    L+ +P EI E   +  L+L
Sbjct: 230 QLQN---------------------------LKTLNLIVTQLTTLPKEIGELQNLKTLNL 262

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  +P +  
Sbjct: 263 LDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTILPKE-I 320

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL 
Sbjct: 321 GQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLD 378

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L ++P+    L SL  L L  N +S LP E+
Sbjct: 379 NNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 412


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 258/510 (50%), Gaps = 55/510 (10%)

Query: 3   RILKAARTSG-SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           RI +A R +  +L+L +  L +VP E+              +  +L  L L+ N + ++ 
Sbjct: 13  RIAEAKRIAAPTLDLCSLKLTEVPKEIG-------------QLTNLIALSLSGNQLTEVP 59

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L  L++S N+L+E+P  IG+L  L  L +  N + ++P+EIG   +L +   
Sbjct: 60  KEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSL 119

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             NQL E+P  +G+ +NL++   S N +  +P+DL     ++KL +  N+LT     L  
Sbjct: 120 FQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKEL-G 178

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL  S+N L  +P+  G L+ LI+L+L QNR+  +P  +    SL E ++  N 
Sbjct: 179 KLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNK 238

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  +P ELGKL+ L  L +  NQL E   E  QL +L+ L LS+N L  +P E+G++  L
Sbjct: 239 LMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARL 298

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +  L+ N L  +   +       + K +  R+ +N+ +E       L+ + TRL +   
Sbjct: 299 TRFSLSQNQLIEIPKEI-----GKIAKLIWLRIDQNQLTEVPRELSQLVNL-TRLHLHQN 352

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           +       L+ IP E+ +  ++T+L LS+N + E+P EL    +L  L L++N++   P 
Sbjct: 353 Q-------LTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPK 405

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
             L  L++L+ L L  N L +VP +                            L  L+EL
Sbjct: 406 E-LGKLTNLTRLHLSYNKLIEVPKE-------------------------LGKLASLREL 439

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L + QL + P ++ +L +L ILDLS NSL
Sbjct: 440 DLDQNQLTKVPKELGKLAKLVILDLSNNSL 469



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/464 (32%), Positives = 229/464 (49%), Gaps = 43/464 (9%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KL+E+P  IG+L  L +L +S N + ++P EIG  T L+    S NQL E+P  +G+  N
Sbjct: 31  KLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLAN 90

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L+  +   N +T +PE++   +                         LTEL   +N L  
Sbjct: 91  LTQLRLHQNRLTEVPEEIGQLAS------------------------LTELSLFQNQLTE 126

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L  L L QN+++ IP  +    SL + Y+  N L+  P ELGKL  L  L
Sbjct: 127 VPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMEL 186

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L  NQL E   E  QL  L  L+LS N L+G+P E+G++ +L +L L+ N L  +    
Sbjct: 187 YLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEV---- 242

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                P  L  L +    + D    T   + I   T+L+    ELSL    L  +P E+ 
Sbjct: 243 -----PKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLT----ELSLSHNQLKEVPKELG 293

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   +T+  LS+N + E+P E+   A L  L + +N++ + P   L+ L +L+ L L  N
Sbjct: 294 QLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRE-LSQLVNLTRLHLHQN 352

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILR 496
            L ++P +    +  L  L LS N   L E P     L +L EL L + QL + P ++ +
Sbjct: 353 QLTKIPKE-LGKVTKLTELSLSQN--QLIEVPKELGQLINLVELRLNQNQLTKVPKELGK 409

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  L  L LS N L  +P+    L SL ELDL  N ++ +P EL
Sbjct: 410 LTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKEL 453



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 196/390 (50%), Gaps = 31/390 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    L +VP E+              + ++L +L L+ N + K+ +DL  L  LT L
Sbjct: 117 LSLFQNQLTEVPKEIG-------------QLINLTELYLSQNQLMKIPKDLERLISLTKL 163

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+E P  +G+L  L  L +S N + ++P E G  T+L+K + S N+L  +P  L
Sbjct: 164 YLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQEL 223

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L++   S N +  +P++L   + ++ L ++ N+LT +    I   T LTEL  S 
Sbjct: 224 GELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEE-IGQLTKLTELSLSH 282

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ +G L+RL R  L QN+++ IP  I     L    +  N L+ +P EL +L 
Sbjct: 283 NQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLV 342

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L LH NQL +   E  ++ +L+ L LS N L  +P E+G++  L +L L  N L  
Sbjct: 343 NLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTK 402

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   L       L    R  L  N+  E       L ++        +EL L+   L+ +
Sbjct: 403 VPKEL-----GKLTNLTRLHLSYNKLIEVPKELGKLASL--------RELDLDQNQLTKV 449

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           P E+ +  ++  LDLS NS   L PELS+ 
Sbjct: 450 PKELGKLAKLVILDLSNNS---LNPELSAA 476



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 164/320 (51%), Gaps = 15/320 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS   L +VP E               +   L KL L+ N +  + ++L  L  LT L
Sbjct: 186 LYLSQNQLTEVPKEFG-------------QLTSLIKLNLSQNRLTGVPQELGELKSLTEL 232

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S NKL E+P  +G+L  L  L +  N + +IP+EIG  T L +   S NQLKE+P  L
Sbjct: 233 HLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKEL 292

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L+ F  S N +  +P+++   +K+  L ++ N+LT +   L +    LT L   +
Sbjct: 293 GQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPREL-SQLVNLTRLHLHQ 351

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ +G +++L  L L QN+++ +P  +    +L E  +  N L+ +P ELGKL+
Sbjct: 352 NQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPKELGKLT 411

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L E   E  +L  L  LDL  N L+ +P E+GK+  L  L L+ N L  
Sbjct: 412 NLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKELGKLAKLVILDLSNNSLNP 471

Query: 313 LRSSLVNGPTPALLKYLRSR 332
             S+           YL+++
Sbjct: 472 ELSAAYEQGLETFFAYLQAQ 491



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 172/350 (49%), Gaps = 19/350 (5%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L+ LI L L  N++  +P  I    +L    +  N L+ +P E+GKL+ L
Sbjct: 32  LTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANL 91

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LH N+L E   E  QL  L+ L L  N L+ +P EIG++  L +L L+ N L  + 
Sbjct: 92  TQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIP 151

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             L       L+   +  L +N+ +EA      LI +         EL L    L+ +P 
Sbjct: 152 KDL-----ERLISLTKLYLSQNQLTEAPKELGKLINLM--------ELYLSQNQLTEVPK 198

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E  +   + KL+LS+N +  +P EL    SL  L LS+NK+ + P   L  L++L+ L +
Sbjct: 199 EFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKE-LGKLTNLTWLHI 257

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 493
           D N L ++P +    +  L  L LS+N   L E P     L  L    L + QL E P +
Sbjct: 258 DQNQLTEIPEE-IGQLTKLTELSLSHN--QLKEVPKELGQLARLTRFSLSQNQLIEIPKE 314

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           I ++ +L  L + QN L  +P     L +LT L L  N ++ +P EL  V
Sbjct: 315 IGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKV 364


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 154/475 (32%), Positives = 229/475 (48%), Gaps = 61/475 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQW 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   + +LDL +N +  LP E+    +LQ L L  N++   P  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 365

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L +L  L LDNN L  +P +  + +  LQ+L L  N +++LP+      L +LQ L
Sbjct: 366 I-EQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVL 421

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L   QL   P +I +LQ L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 422 GLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 214/397 (53%), Gaps = 20/397 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 273 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLH 332

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 333 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 383

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 384 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQL 438

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            +LQ L L  N++  +P  I   L +L  L L  NPL
Sbjct: 439 QNLQELCLDENQLTTFPKEI-RQLKNLQELHLYLNPL 474



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 215/445 (48%), Gaps = 43/445 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     L EL
Sbjct: 133 PKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+ L L  N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL         P  +  L++                            + L L    
Sbjct: 312 QLTTL---------PKEIGQLQN---------------------------LQRLDLHQNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +   + +L L  N +  LP E+    +L+ L L  N++   P  +L  L S
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL-RLQS 394

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L +N L  +P +    +  LQ+L L S  + +LP+      L +LQEL L   QL
Sbjct: 395 LQVLALGSNRLSTLPKE-IGQLQNLQVLGLISNQLTTLPKE--IGQLQNLQELCLDENQL 451

Query: 488 REAPTDILRLQQLRILDLSQNSLQS 512
              P +I +L+ L+ L L  N L S
Sbjct: 452 TTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 192/394 (48%), Gaps = 43/394 (10%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLQNLQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L   
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL         P  + 
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIG 229

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L++                            K L+L    L+ +P EI E   +  L+L
Sbjct: 230 QLQN---------------------------LKTLNLIVTQLTTLPKEIGELQNLKTLNL 262

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  +P +  
Sbjct: 263 LDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE-I 320

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL 
Sbjct: 321 GQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLD 378

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L ++P+    L SL  L L  N +S LP E+
Sbjct: 379 NNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 412



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 348 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 407

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 408 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 467

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 468 HLYLNPLS 475



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 371 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 430

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 431 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 258/540 (47%), Gaps = 63/540 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  L  ++  L  L  L +  N+L+ +PA IG+L  L+ L ++ N +M +
Sbjct: 30  LRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSV 89

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L + + +SNQL  +P+ +G+  +L   +   N +TS+PE++   + +  L 
Sbjct: 90  PAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLV 149

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+ T +    I   T L EL    N L  +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 150 LGGNQFTSVPAE-IGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEI 208

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------KEYCVEACQL---- 275
                L    +  N L++LPAE+G+L+ L  L L +NQL       +E     C++    
Sbjct: 209 GQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDD 268

Query: 276 -----------RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                      R+  LDL    L G LP E+G+++ LR L L GN L ++         P
Sbjct: 269 GHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSV---------P 319

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           A +  L S +         T+    I   T L V    L L+   L+++P+EI     +T
Sbjct: 320 AEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEV----LYLDHNRLASMPAEIGRLTSLT 375

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--------------------- 422
            L LS N +  +P E+    SL+ L LSRN++   P AI                     
Sbjct: 376 TLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPA 435

Query: 423 -LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
            +  L +L  L+L  N L  VP++    +  L++L+LS N + S+P       L  L+ L
Sbjct: 436 EIGCLGALRLLQLAGNELTSVPAE-IGQLTSLEVLELSRNKLTSVPVE--IGQLTSLERL 492

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YL   +L   P +I +L  L+ L L  N L S+P     L +L   DL  N ++++P E+
Sbjct: 493 YLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEI 552



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 251/520 (48%), Gaps = 78/520 (15%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +L  L  L  L++  N+L+ LPA IG+L  L+ L +  N +  +P EIG  TAL +   +
Sbjct: 23  ELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLA 82

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  +P+ +G+  +L +   ++N +T++P ++   + +  L + GN+LT         
Sbjct: 83  ANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLT--------- 133

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                           +PE IG L+ L+ L L  N+  S+P+ I    +L E  +  N L
Sbjct: 134 ---------------SVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLDGNRL 178

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+G+L+ LG L L  NQL     E  QL  L  L+L  N L+ LP EIG++T+L 
Sbjct: 179 TSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLE 238

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKE-------DLITM 351
            LLL  N L ++         PA ++ LR+   R+  ++      T E       DL+  
Sbjct: 239 HLLLDNNQLTSV---------PAEIRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLVEF 289

Query: 352 A---------TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                      RLS   + L L G NL+++P+EI +   +    LS N +  +P E+   
Sbjct: 290 GLIGALPAEVGRLSAL-RWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQL 348

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            SL+ L L  N++   P  I   L+SL+ L L +N L  VP++    +  L+ L LS N 
Sbjct: 349 TSLEVLYLDHNRLASMPAEI-GRLTSLTTLFLSSNRLTSVPAE-IGQLTSLKGLHLSRNQ 406

Query: 462 IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           + S+P                            L  L+ L L   +L   P +I +L  L
Sbjct: 407 LTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSL 466

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +L+LS+N L S+P     LTSL  L LS N +++LP E+
Sbjct: 467 EVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEI 506



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 232/476 (48%), Gaps = 51/476 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL++  L +VP E+              +   L+ L L  N +  + E++  L  L VL
Sbjct: 102 LNLNSNQLTNVPAEI-------------GQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVL 148

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+ + +PA IG+L  L+ L +  N +  +P EIG  T+L +   S NQL  +P+ +
Sbjct: 149 VLGGNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEI 208

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI------------- 180
           G+   L   +   N +TSLP ++   + +  L ++ N+LT +   +              
Sbjct: 209 GQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDD 268

Query: 181 ASWTMLTEL--------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             W  +T          +    L+  +P  +G LS L  L L  N + S+P+ I    SL
Sbjct: 269 GHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSL 328

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             F + +N L+++PAE+G+L+ L  L L  N+L     E  +L  L+ L LS+N L+ +P
Sbjct: 329 MTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVP 388

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
            EIG++T+L+ L L+ N L ++         PA ++ LR+     ED + +      I  
Sbjct: 389 AEIGQLTSLKGLHLSRNQLTSV---------PAAIRDLRAAGCRLEDCDLTGLLPAEIGC 439

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
              L +    L L G  L+++P+EI +   +  L+LSRN +  +P E+    SL+ L LS
Sbjct: 440 LGALRL----LQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLS 495

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
            N++   P  I   L+SL  L LD+N L  VP++    +  LQ  DL  N + S+P
Sbjct: 496 SNRLTSLPAEI-GQLTSLKRLYLDHNQLTSVPAE-IGQLAALQWFDLQRNELTSVP 549



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 195/452 (43%), Gaps = 92/452 (20%)

Query: 134 GRC--LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           GR   L L DF  +      +P +L   S + KL + GN+LT L                
Sbjct: 4   GRVVKLELEDFDLTG----VVPAELGRLSALRKLSLHGNELTSL---------------- 43

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L+ L  L L  N++ S+P+ I    +L E  +  N L ++PAE+G+
Sbjct: 44  --------PAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQ 95

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L+ L  L+L+SNQL     E  QL  L  L L  N L+ +P EIG++T+L  L+L GN  
Sbjct: 96  LTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQF 155

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            ++ + +  G   AL +    RL  N  +        L ++         ELSL G  L+
Sbjct: 156 TSVPAEI--GQLTALREL---RLDGNRLTSVPAEIGQLTSLG--------ELSLSGNQLT 202

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-------- 422
           ++P+EI +   +  L+L  N +  LP E+    SL+ L+L  N++   P  I        
Sbjct: 203 SVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGC 262

Query: 423 ------------------------------------LTSLSSLSCLKLDNNPLRQVPSDG 446
                                               +  LS+L  L+L  N L  VP++ 
Sbjct: 263 RVDLDDGHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAE- 321

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  L    LS N + S+P       L  L+ LYL   +L   P +I RL  L  L L
Sbjct: 322 IGQLTSLMTFGLSDNKLTSVPAE--IGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFL 379

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           S N L S+P     LTSL  L LS N ++++P
Sbjct: 380 SSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVP 411



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 2/252 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  +  ++  L  L    +S NKL+ +PA IG+L  L+ L +  N +  +
Sbjct: 305 LRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASM 364

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L     SSN+L  +P+ +G+  +L     S N +TS+P  + D  + +   
Sbjct: 365 PAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDL-RAAGCR 423

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E   LT L    I     L  L  + N L  +P  IG L+ L  L+L +N++ S+P  I
Sbjct: 424 LEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEI 483

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+ +N L++LPAE+G+L+ L  L L  NQL     E  QL  L   DL  N
Sbjct: 484 GQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRN 543

Query: 286 SLSGLPPEIGKM 297
            L+ +P EIG++
Sbjct: 544 ELTSVPAEIGQL 555



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+   L  VP E+              +   L+ L L+ N +  +  ++  L  L  L
Sbjct: 446 LQLAGNELTSVPAEI-------------GQLTSLEVLELSRNKLTSVPVEIGQLTSLERL 492

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+ LPA IG+L  LK L +  N +  +P EIG   AL  FD   N+L  +P+ +
Sbjct: 493 YLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEI 552

Query: 134 GRCL 137
           G+ L
Sbjct: 553 GQLL 556


>gi|242005578|ref|XP_002423641.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
 gi|212506801|gb|EEB10903.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
          Length = 595

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 173/589 (29%), Positives = 285/589 (48%), Gaps = 81/589 (13%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGD--KWWEAVDLQKL 50
           ++K AR SG LNLS++ L   PNE++            +FD+  E D  KWWE   L+ L
Sbjct: 25  LMKEARKSGKLNLSDKQLTVWPNEIFDLSNSYSTNQNIDFDQTEEDDSCKWWEVEPLKTL 84

Query: 51  -----------------------ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
                                  +L HNN+  L  +L  L  L  LN+S N+L E P  +
Sbjct: 85  DLSSNYLKTIPVKIKILDSLVTLMLHHNNLNSLPGELGQLTKLVTLNLSQNELHEFPMEL 144

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             +  LK++++S N     PD +     L   D SSN+++E+   +G    L +   S+N
Sbjct: 145 SGMKELKNINLSSNLCKIFPDFLYDLVLLNFLDISSNKIEEIKPGIGFLTRLVNLNLSHN 204

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            ++S+P ++  C  +  L++  NK+T                       +G+P+ +  + 
Sbjct: 205 NLSSIPLEITSCQALRDLNLSNNKITS----------------------SGLPD-LFDMK 241

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLK 266
           +L  + L  N++ S+P  + GC  L E ++G N +  +   EL  LS L  ++L +N LK
Sbjct: 242 KLEMIQLQHNKLTSLP-CLRGCSELKEIHLGFNMIEEITVEELSTLSHLKVINLRNNHLK 300

Query: 267 EYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E   E +C L L  LDLSNN L  LP  +  +  L  LL+ GN LR++R  +++G T  L
Sbjct: 301 ELPKEISCFLNLVRLDLSNNDLMELPNTLSILPHLEILLVEGNSLRSIRKDIIHGGTHRL 360

Query: 326 LKYLRSRLPENE-----DSEASTTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWE- 378
           L +L+  +P  E      S+    KE+      R ++  SK L+L   +L  +   ++E 
Sbjct: 361 LNHLKLTMPLAEAEKYLQSQYPCEKEEF---PDRYAMRCSKALNLSNKSLCNVSKAVFEE 417

Query: 379 --AGEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
             A   T +DLS+N + E+P      C +L  L +S N++++ P  I T L +L  L + 
Sbjct: 418 ALAVPCTIVDLSKNKLLEIPSGTWLLCKTLNDLNISCNQLQEIPAEIKTCL-NLRYLNIS 476

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL--RRMQLREAPTD 493
           +N ++++P D F     L+ LD+S+N  + P    +   P L+ L L   ++   +A  +
Sbjct: 477 HNNIKELP-DEFAACTRLRELDISFNSFNQPPMCVY-KFPALEILLLGNNKISFIDA-EE 533

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +L L+ L  LDL+ N+L  IP     +T L  L L  N +  L P +++
Sbjct: 534 LLNLKMLTHLDLTNNNLTEIPPLIGKMTQLRTLKLEGNPLRVLRPAIIA 582



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 149/330 (45%), Gaps = 53/330 (16%)

Query: 46  DLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +L+++ L  N IE++  E+L  L  L V+N+ +N L ELP  I     L  LD+S N +M
Sbjct: 264 ELKEIHLGFNMIEEITVEELSTLSHLKVINLRNNHLKELPKEISCFLNLVRLDLSNNDLM 323

Query: 105 KIPDEI------------GSATALVKFDCSS-------NQLK------------------ 127
           ++P+ +            G++   ++ D          N LK                  
Sbjct: 324 ELPNTLSILPHLEILLVEGNSLRSIRKDIIHGGTHRLLNHLKLTMPLAEAEKYLQSQYPC 383

Query: 128 ---ELPSSLG-RC---LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              E P     RC   LNLS+    N       E LA     + +D+  NKL  + +   
Sbjct: 384 EKEEFPDRYAMRCSKALNLSNKSLCNVSKAVFEEALA--VPCTIVDLSKNKLLEIPSGTW 441

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L +L  S N L  +P  I +   L  L++  N I  +P   + C  L E  +  N
Sbjct: 442 LLCKTLNDLNISCNQLQEIPAEIKTCLNLRYLNISHNNIKELPDEFAACTRLRELDISFN 501

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGK 296
           + +  P  + K   L  L L +N++    ++A +L     L+ LDL+NN+L+ +PP IGK
Sbjct: 502 SFNQPPMCVYKFPALEILLLGNNKIS--FIDAEELLNLKMLTHLDLTNNNLTEIPPLIGK 559

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           MT LR L L GNPLR LR +++   T A+L
Sbjct: 560 MTQLRTLKLEGNPLRVLRPAIIAKGTEAVL 589


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 245/518 (47%), Gaps = 69/518 (13%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y++F+EA +       +D++ L L +N +     ++  L  L  L++++N+L  LP  
Sbjct: 25  KFYRDFNEALKN-----PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE 79

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           I  L  LK L +S N +  +P EIG+   L   D   NQL+ LPS +G+  +L      +
Sbjct: 80  IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEH 139

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + +LP+++     + +L++  N+L +L    I +   L +L    N L  +P+ IG+L
Sbjct: 140 NQLITLPQEIGTLQDLEELNLANNQLRILPKE-IGTLQHLQDLNVFNNQLITLPQEIGTL 198

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL KL  L L +NQLK
Sbjct: 199 QNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLK 258

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  +L+ L  L L NN L   P EIG +  L++L L  N   TL         P  
Sbjct: 259 SLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTL---------PQE 309

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           +  L  RLP                           L+LE   L+ +P EI     +  L
Sbjct: 310 IGTLH-RLP--------------------------WLNLEHNQLTTLPQEIGRLERLEWL 342

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +L  N +  LP E+ +   LQ L L+ N++   P  I   L +L  L L+ N L      
Sbjct: 343 NLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEI-GQLQNLKDLDLEYNQL------ 395

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                            A+LPE     +L  L+ L L+  QL   P +I  LQ++  L+L
Sbjct: 396 -----------------ATLPE--AIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNL 436

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + N L+++P+G   L SL +LDLS N  +  P E+V +
Sbjct: 437 ANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGL 474



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 216/448 (48%), Gaps = 50/448 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L+ +P E+     E  +  KW        L L+ N ++ L +++  L  L VL
Sbjct: 66  LSLANNQLKTLPKEI-----ETLQKLKW--------LYLSENQLKTLPKEIGTLQNLEVL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP+ IG+L  LK L +  N ++ +P EIG+   L + + ++NQL+ LP  +
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEI 172

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA----SWTMLTE- 188
           G   +L D    NN + +LP+++     +  L++E N+L  L   + A     W  LT  
Sbjct: 173 GTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNN 232

Query: 189 -----------------LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                            L  + N L  +P+ IG L  L  L L  NR+ S P  I    +
Sbjct: 233 QLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPN 292

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   ++  N  + LP E+G L +L  L+L  NQL     E  +L RL  L+L NN L+ L
Sbjct: 293 LQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATL 352

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG +  L+ L L  N L TL   +        L+ L+    + E ++ +T  E + T
Sbjct: 353 PKEIGTLQKLQHLYLANNQLATLPKEI------GQLQNLKDL--DLEYNQLATLPEAIGT 404

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +  RL      LSL+   L+ +P EI    +I KL+L+ N ++ LP  +    SL+ L L
Sbjct: 405 LQ-RLEW----LSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDL 459

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           S N    +P  I+  L  L  LKL N P
Sbjct: 460 SGNPFTTFPKEIV-GLKHLQMLKLKNIP 486


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 250/518 (48%), Gaps = 47/518 (9%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDL--QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           N VY N  EA +       ++L  Q+   ++N +  L +++ NL  L +L +  N+L+ L
Sbjct: 35  NGVYYNLTEALQHPTDVRVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLTTL 94

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  +G+L  L+ LD+  N +  +P+EIG    L K + + NQL  LP  +G    L +  
Sbjct: 95  PKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELY 154

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +N   +LP+ +    K+ +LD+  N+LT L    I     L EL    N L  +P+ I
Sbjct: 155 LGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKE-IEKLQKLQELDLGINQLTTLPKEI 213

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L +L  L+L+ N++ ++P  I     L    + +N L+ LP E+G L  L  L L+SN
Sbjct: 214 GNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSN 273

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L +L  L LS+N L+ +P EIG +  L+KL L  N L  +   + N   
Sbjct: 274 QLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGN--- 330

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L+ L                              +EL L    L+ +P EI    ++
Sbjct: 331 ---LQKL------------------------------EELDLGQNQLTILPKEIGNLQKL 357

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             LDL  N +  LP E+    + QTL L+RN++   P  I  +L  L  L L +N L  +
Sbjct: 358 QTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEI-GNLQKLKWLYLAHNNLATI 416

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P +    +  LQ+L L+ N + +LP+     +L +LQ L L + QL   P +I +L+ L 
Sbjct: 417 PQE-IGSLQSLQVLTLNSNRLTTLPKE--IGNLQNLQGLNLDKNQLTTLPKEIGKLRNLE 473

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            LDLS+N L S PE    L  L  L L   NI  L P+
Sbjct: 474 SLDLSENPLTSFPEEIGKLQHLKWLRLE--NIPTLLPQ 509



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 232/470 (49%), Gaps = 49/470 (10%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S+N+L+ LP  I  L  LK L +  N +  +P E+G    L + D   NQL  LP  +G+
Sbjct: 64  SNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGK 123

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL     + N +T+LP+++ +  K+ +L +  N+   L                    
Sbjct: 124 LQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATL-------------------- 163

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               P+ IG L +L  LDL  N++ ++P  I     L E  +G N L+ LP E+G L KL
Sbjct: 164 ----PKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKL 219

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL+L+ NQL     E  +L +L  L+L++N L+ LP EIG +  L++L L  N L TL 
Sbjct: 220 QTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLP 279

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +       L K     L    D++ ++  E++  +        ++LSL    L+ IP 
Sbjct: 280 KEI-----EKLQKLQELHL---SDNQLTSVPEEIGNLQNL-----QKLSLHSNQLTIIPK 326

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI    ++ +LDL +N +  LP E+ +   LQTL L  NK+   P  I   L +   L L
Sbjct: 327 EIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEI-GKLQNPQTLYL 385

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREA 490
           + N L  +P    K+I  LQ L   Y    N+A++P+     SL  LQ L L   +L   
Sbjct: 386 NRNQLTTLP----KEIGNLQKLKWLYLAHNNLATIPQE--IGSLQSLQVLTLNSNRLTTL 439

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I  LQ L+ L+L +N L ++P+    L +L  LDLS+N +++ P E+
Sbjct: 440 PKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEI 489



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 212/436 (48%), Gaps = 26/436 (5%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L L +  L  +P EV K  N +E   G      +        +LQKL L  N +  L ++
Sbjct: 84  LGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKE 143

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L +  N+ + LP AIG+L  L+ LD+  N +  +P EI     L + D   
Sbjct: 144 IGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGI 203

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G    L     ++N +T+LP+++    K+  L++  N+LT L    I + 
Sbjct: 204 NQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKE-IGNL 262

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L    N L  +P+ I  L +L  L L  N++ S+P  I    +L +  + +N L+
Sbjct: 263 QNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLT 322

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +P E+G L KL  LDL  NQL     E   L +L  LDL NN L+ LP EIGK+   + 
Sbjct: 323 IIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQT 382

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L TL   + N      LK+L         +  +T  +++ ++ + L V    L
Sbjct: 383 LYLNRNQLTTLPKEIGNLQK---LKWLYLA-----HNNLATIPQEIGSLQS-LQV----L 429

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +L    L+ +P EI     +  L+L +N +  LP E+    +L++L LS N +  +P+ I
Sbjct: 430 TLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEI 489

Query: 423 LTSLSSLSCLKLDNNP 438
              L  L  L+L+N P
Sbjct: 490 -GKLQHLKWLRLENIP 504



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 206/410 (50%), Gaps = 22/410 (5%)

Query: 135 RCLNLSDFKA--SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           R LNL   +   SNN +T+LP+++ +   +  L +  N+LT L    +     L EL   
Sbjct: 52  RVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKE-VGKLQNLEELDLG 110

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +PE IG L  L +L+L+QN++ ++P  I     L E Y+G+N  + LP  +GKL
Sbjct: 111 QNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKL 170

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  LDL  NQL     E  +L +L  LDL  N L+ LP EIG +  L+ L L  N L 
Sbjct: 171 QKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLT 230

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L         P  +  L+     N +    TT    I     L    ++L L    L+ 
Sbjct: 231 NL---------PKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNL----QQLYLYSNQLTT 277

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +  ++ +L LS N +  +P E+ +  +LQ L L  N++   P  I  +L  L  
Sbjct: 278 LPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEI-GNLQKLEE 336

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L  N L  +P +   ++  LQ LDL  N + +LP+      L + Q LYL R QL   
Sbjct: 337 LDLGQNQLTILPKE-IGNLQKLQTLDLGNNKLTALPKE--IGKLQNPQTLYLNRNQLTTL 393

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I  LQ+L+ L L+ N+L +IP+   +L SL  L L+ N ++ LP E+
Sbjct: 394 PKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEI 443


>gi|301112348|ref|XP_002905253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095583|gb|EEY53635.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 702

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 263/545 (48%), Gaps = 33/545 (6%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R L+ AR +G L+L  R+L + P+ VY   +   + +K WE +DL K+ L+HN I  + +
Sbjct: 26  RALREARRTGVLSLPARNLIEFPSPVYHLEEHLEKDEKKWECIDLVKMDLSHNAIPSISD 85

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           ++  L  +T + ++ N L  LP    ELH L  LD+S N + + + +  G+   L +   
Sbjct: 86  EIGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELEQNLSESFGALIGLKELGL 145

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  LP+S+    NL       N +T+LPE + +  K+  L+   N LT L ++  A
Sbjct: 146 SGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHVLNAHSNHLTALPSSFGA 205

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M   L   KN L    + + +L++L  LDL QN++   P+   G   L + ++G N 
Sbjct: 206 LRNM-QNLDLKKNRLESTGDALATLTKLKFLDLRQNKLAVFPALPEG-ADLDQVFLGYNT 263

Query: 242 LSAL--PAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           LS +   + L     +  LD+  N+L       AC  RL  LD++NN LS LPP +G + 
Sbjct: 264 LSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYLK 323

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L   ++ GNPLR +R ++++    +L KYLR+R       +    + D + +    +  
Sbjct: 324 HLNHFIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEEERDELQIEREQAAA 383

Query: 359 SKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           S  + L   +L+ +P ++   G+      +  L+LS N ++ LP  +    SL+TL +  
Sbjct: 384 SGTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGELVSLKTLTVED 443

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
           N+++   D  + +L  L  L+L  N L       F                 L  +P   
Sbjct: 444 NELQAL-DPSIAALPHLELLRLRKNSLSAESISEF-----------------LGNSPALG 485

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDN 531
               L+EL +R   L   P +I +L+ L  L L  N L+++    +  LT ++ + +SDN
Sbjct: 486 D--SLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETLDRFPWSQLTKVSVVSVSDN 543

Query: 532 NISAL 536
            + AL
Sbjct: 544 KLRAL 548



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 154/365 (42%), Gaps = 73/365 (20%)

Query: 43  EAVDLQKLILAHNNIEKLKED--LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           E  DL ++ L +N +  + E   LR    +TVL++  NKL+ LPA I  L+ LK+LDV+ 
Sbjct: 250 EGADLDQVFLGYNTLSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVAN 309

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSL--GRCLNLSDFKASNNC----ITSLPE 154
           N +  +P  +G    L  F    N L+ +  ++    C +L  +  +       +  L E
Sbjct: 310 NDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEE 369

Query: 155 DLAD-------CSKMSKLDVEGNKLTVLSNNLIASW-----TMLTELIASKNLLNGMPET 202
           +  +        +    + +  N L VL  +L+        + L  L  S N L  +P  
Sbjct: 370 ERDELQIEREQAAASGTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAA 429

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCC-----------------------------SLA 233
           IG L  L  L +  N + ++  SI+                                SL 
Sbjct: 430 IGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLSAESISEFLGNSPALGDSLK 489

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--------------YCVEACQLR--- 276
           E  + NN+L+ LP E+ +L  L TL L  N+L+                 V   +LR   
Sbjct: 490 ELDVRNNSLATLPVEISQLRSLETLLLGFNRLETLDRFPWSQLTKVSVVSVSDNKLRALG 549

Query: 277 -------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  L+ L   NNSL+ +P E+G    LR + + GNP RT+R  ++   +  +L YL
Sbjct: 550 RIYDAPLLASLSFENNSLTKVPCELGLCPHLRAIYMNGNPQRTVRGGVIAKGSAEILAYL 609

Query: 330 RSRLP 334
           +++LP
Sbjct: 610 KNKLP 614



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 177/444 (39%), Gaps = 73/444 (16%)

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           LVK D S N +  +   +G   +++  K + N +  LPE   +   ++ LD+  N+L   
Sbjct: 70  LVKMDLSHNAIPSISDEIGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELE-- 127

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
                                  + E+ G+L  L  L L  N++  +P+SI+   +L   
Sbjct: 128 ---------------------QNLSESFGALIGLKELGLSGNKLSHLPNSITLLENLEAL 166

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
           ++  N L+ALP  +G L KL  L+ HSN L         LR +  LDL  N L      +
Sbjct: 167 HVDENKLTALPERIGNLHKLHVLNAHSNHLTALPSSFGALRNMQNLDLKKNRLESTGDAL 226

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA--------STTKE 346
             +T L+ L L  N L            PAL        PE  D +         ST  E
Sbjct: 227 ATLTKLKFLDLRQNKLAVF---------PAL--------PEGADLDQVFLGYNTLSTINE 269

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I +  + SVT   L +    L+ +P+ I     +  LD++ N + +LPP L     L 
Sbjct: 270 TSI-LRVKDSVTV--LDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYLKHLN 326

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNN-PLRQVPSDGFKDIPMLQILDLSYNIASL 465
             I+  N ++    AI  ++ S  C  L      R  P  G      + +L+   +   +
Sbjct: 327 HFIVDGNPLR----AIRRAVISAGCESLKKYLRTRGAPPAG------VDVLEEERDELQI 376

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI------LDLSQNSLQSIPEGFKN 519
                 +S      + L    L   P D++   Q         L+LS N L+S+P     
Sbjct: 377 EREQAAAS----GTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGE 432

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L SL  L + DN + AL P + ++
Sbjct: 433 LVSLKTLTVEDNELQALDPSIAAL 456



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           D    A R +  +  LSL   NL   PS ++   E  + D  +            C  L 
Sbjct: 22  DQTARALREARRTGVLSLPARNLIEFPSPVYHLEEHLEKDEKK----------WECIDLV 71

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            + LS N I    D I   L+S++ +KL  N L+ +P +GF ++  L  LDLS+N     
Sbjct: 72  KMDLSHNAIPSISDEI-GGLTSVTSIKLTKNALQVLP-EGFFELHALTYLDLSHNELEQN 129

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
            +  F +L  L+EL L   +L   P  I  L+ L  L + +N L ++PE   NL  L  L
Sbjct: 130 LSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHVL 189

Query: 527 DLSDNNISALP 537
           +   N+++ALP
Sbjct: 190 NAHSNHLTALP 200



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 26/192 (13%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAVD--------LQKLILAHNNI--EKLK 61
           LNLS+  LR +P  + +  +       D   +A+D        L+ L L  N++  E + 
Sbjct: 416 LNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLSAESIS 475

Query: 62  EDLRNLPLL----TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATA 115
           E L N P L      L+V +N L+ LP  I +L  L++L + FN +  + D       T 
Sbjct: 476 EFLGNSPALGDSLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETL-DRFPWSQLTK 534

Query: 116 LVKFDCSSNQLKELPSSLGRCLN---LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           +     S N+L+    +LGR  +   L+     NN +T +P +L  C  +  + + GN  
Sbjct: 535 VSVVSVSDNKLR----ALGRIYDAPLLASLSFENNSLTKVPCELGLCPHLRAIYMNGNPQ 590

Query: 173 TVLSNNLIASWT 184
             +   +IA  +
Sbjct: 591 RTVRGGVIAKGS 602


>gi|428169946|gb|EKX38875.1| hypothetical protein GUITHDRAFT_114981 [Guillardia theta CCMP2712]
          Length = 579

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 237/480 (49%), Gaps = 83/480 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLIL----------- 52
           + ++A ++G+LNL++R+L  VP E+  ++      + WWE  +L+KL L           
Sbjct: 87  VFRSAHSNGNLNLADRNLDSVP-ELLLSWSAPIGDENWWEVSELKKLDLSLNALSNLPDD 145

Query: 53  -------------AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                        A+N ++ L   L + P L+ LN+ HN+ + LP  +G L  L SL V 
Sbjct: 146 LFASFSLLQTLHVANNKLQTLPPSLTSCPELSKLNIQHNQFATLPGFVGHLSCLSSLQVD 205

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N+I  +P+EIG    L  F CS+NQL++LPSSLG   +L+    S+N I ++P  +   
Sbjct: 206 HNAIHTLPEEIGLLHNLDTFTCSNNQLQQLPSSLGHLTSLTFLNMSSNRIEAIPGTV--- 262

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
                    GN L+            LT L AS NLL  +P+ + +LS L RLD+ +N  
Sbjct: 263 ---------GNLLS------------LTSLEASHNLLQSLPDGLRNLSNLTRLDVREN-C 300

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--- 275
           L+  +S+     ++E  +G N +   P  LG +L  L  LD+  N +    +EA  L   
Sbjct: 301 LTSATSLPHAPRMSELLLGFNKIQTFPPNLGDRLKSLSVLDIRDNAISN--LEASDLTGL 358

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---- 314
                            +L +LD+ NN +  +PPE+G MTTL  +LL GNPL+T+R    
Sbjct: 359 KVSMLVDNLGAPSDIDMKLKMLDVRNNEIKMVPPELGLMTTLTSILLDGNPLKTMRRCDE 418

Query: 315 --SSLVNGPTPALLKYLRSRLPEN--EDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              +++ G    +L+YLRSR+ +N  ED   S    D + M  R SV +  L L+G+ L 
Sbjct: 419 SGGTIITGTAREILEYLRSRIQQNPEEDVPTSGLTRD-VAMTIRSSVGNGLLCLKGLQLQ 477

Query: 371 AIPSEIWEAGEITK-LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             P + +   +  K LD S N+++ L     S  +L T+ L+ N++     A    LS+L
Sbjct: 478 DFPYDCFNLSDSLKSLDFSDNNLESLSERCLSWTNLHTINLANNQLSRTEQASYHVLSNL 537



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 199/423 (47%), Gaps = 61/423 (14%)

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           E+  + S++ KLD+  N L+ L ++L AS+++L  L  + N L  +P ++ S   L +L+
Sbjct: 121 ENWWEVSELKKLDLSLNALSNLPDDLFASFSLLQTLHVANNKLQTLPPSLTSCPELSKLN 180

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           +  N+  ++P  +     L+   + +NA+  LP E+G L  L T    +NQL++      
Sbjct: 181 IQHNQFATLPGFVGHLSCLSSLQVDHNAIHTLPEEIGLLHNLDTFTCSNNQLQQLPSSLG 240

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL------------------- 313
            L  L+ L++S+N +  +P  +G + +L  L  + N L++L                   
Sbjct: 241 HLTSLTFLNMSSNRIEAIPGTVGNLLSLTSLEASHNLLQSLPDGLRNLSNLTRLDVRENC 300

Query: 314 ---RSSLVNGP--TPALLKY--LRSRLPENEDSEASTT----KEDLITMATRLSVTSKEL 362
               +SL + P  +  LL +  +++  P   D   S +    +++ I+      +T  ++
Sbjct: 301 LTSATSLPHAPRMSELLLGFNKIQTFPPNLGDRLKSLSVLDIRDNAISNLEASDLTGLKV 360

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK-----D 417
           S+   NL A PS+I    ++  LD+  N I+ +PPEL    +L +++L  N +K     D
Sbjct: 361 SMLVDNLGA-PSDI--DMKLKMLDVRNNEIKMVPPELGLMTTLTSILLDGNPLKTMRRCD 417

Query: 418 WPDAILTSLSSLSCL-----KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
                + + ++   L     ++  NP   VP+ G          D++  I S   N    
Sbjct: 418 ESGGTIITGTAREILEYLRSRIQQNPEEDVPTSGLTR-------DVAMTIRSSVGNGL-- 468

Query: 473 SLPHLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
                  L L+ +QL++ P D   L   L+ LD S N+L+S+ E   + T+L  ++L++N
Sbjct: 469 -------LCLKGLQLQDFPYDCFNLSDSLKSLDFSDNNLESLSERCLSWTNLHTINLANN 521

Query: 532 NIS 534
            +S
Sbjct: 522 QLS 524



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 20/216 (9%)

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS------------EIWEAGEITKLDL 387
           EA       +T   R + ++  L+L   NL ++P               WE  E+ KLDL
Sbjct: 75  EAKKKDSGGLTGVFRSAHSNGNLNLADRNLDSVPELLLSWSAPIGDENWWEVSELKKLDL 134

Query: 388 SRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           S N++  LP +L +S + LQTL ++ NK++  P + LTS   LS L + +N    +P  G
Sbjct: 135 SLNALSNLPDDLFASFSLLQTLHVANNKLQTLPPS-LTSCPELSKLNIQHNQFATLP--G 191

Query: 447 F-KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           F   +  L  L + +N I +LPE      L +L        QL++ P+ +  L  L  L+
Sbjct: 192 FVGHLSCLSSLQVDHNAIHTLPEE--IGLLHNLDTFTCSNNQLQQLPSSLGHLTSLTFLN 249

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +S N +++IP    NL SLT L+ S N + +LP  L
Sbjct: 250 MSSNRIEAIPGTVGNLLSLTSLEASHNLLQSLPDGL 285



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 36/283 (12%)

Query: 277 LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L  LDLS N+LS LP ++    + L+ L +  N L+TL  SL + P  + L    ++   
Sbjct: 129 LKKLDLSLNALSNLPDDLFASFSLLQTLHVANNKLQTLPPSLTSCPELSKLNIQHNQFAT 188

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                       L      LS  S  L ++   +  +P EI     +     S N +Q+L
Sbjct: 189 ------------LPGFVGHLSCLSS-LQVDHNAIHTLPEEIGLLHNLDTFTCSNNQLQQL 235

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  L    SL  L +S N+I+  P  +  +L SL+ L+  +N L+ +P DG +++  L  
Sbjct: 236 PSSLGHLTSLTFLNMSSNRIEAIPGTV-GNLLSLTSLEASHNLLQSLP-DGLRNLSNLTR 293

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIP 514
           LD+  N  +   + P +  P + EL L   +++  P ++  RL+ L +LD+  N++ ++ 
Sbjct: 294 LDVRENCLTSATSLPHA--PRMSELLLGFNKIQTFPPNLGDRLKSLSVLDIRDNAISNLE 351

Query: 515 E----GFK------NLTS-------LTELDLSDNNISALPPEL 540
                G K      NL +       L  LD+ +N I  +PPEL
Sbjct: 352 ASDLTGLKVSMLVDNLGAPSDIDMKLKMLDVRNNEIKMVPPEL 394


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 243/513 (47%), Gaps = 42/513 (8%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N  +A +       +DLQ     H  +  L +++ NL  L  L++ +N+L+ LP  IG
Sbjct: 38  YYNLTKALQHPTDVRYLDLQAKDSNHK-LTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIG 96

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +L  L+ LD+++NS+  +P EIG    L      +NQL   P  + +   L     ++N 
Sbjct: 97  KLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQ 156

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T+LP+++    K+  L+++GN+ T L    I     L EL    N    +P+ I  L  
Sbjct: 157 LTTLPKEIGKLQKLKVLNLDGNQFTTLPKE-IEKLQKLKELHLGSNQFTTLPKEIKKLQN 215

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L+ N++ ++P  I    +L   ++ NN L  LP E+GKL  L  L L++NQL   
Sbjct: 216 LQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTL 275

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  +L+ L  L L  N L+ LP EIGK+  L+ L    N L TL         P  +K
Sbjct: 276 PKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTL---------PKEIK 326

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L++    +  S   TT    I    +L    +EL L    L+ +P EI +  ++ +L L
Sbjct: 327 KLQNLQWLDLHSNQLTTLSKEIGKLQKL----QELHLSSNQLTTLPKEIGKLQKLQELHL 382

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N +  LP E+     L+ L L  N++   P  I  +L  L  L L NN L  +P +  
Sbjct: 383 GDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEI-GNLQKLRGLDLGNNKLTALPIE-- 439

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                                    +L  L+ LYL   QL+  P +I  LQ+LR LDLS 
Sbjct: 440 -----------------------IGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSD 476

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N L +IPE   NL  L  LDLSDN ++ LP E+
Sbjct: 477 NQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEI 509



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 251/528 (47%), Gaps = 37/528 (7%)

Query: 17  SNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVS 76
           SN  L ++P E+                 +LQKL L +N +  L +++  L  L  L+++
Sbjct: 61  SNHKLTNLPKEI-------------GNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLN 107

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           +N L+ LP  IG+L  L  L +  N +   P EI     L K   + NQL  LP  +G+ 
Sbjct: 108 YNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKL 167

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L       N  T+LP+++    K+ +L +  N+ T L    I     L  L  + N L
Sbjct: 168 QKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKE-IKKLQNLQGLHLNNNQL 226

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  L  L L+ N++ ++P  I    +L   ++ NN L+ LP E+GKL  L 
Sbjct: 227 KTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQ 286

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L LH NQL     E  +L +L VL   +N L+ LP EI K+  L+ L L  N L TL  
Sbjct: 287 GLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSK 346

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIP 373
            +  G    L              E   +   L T+   +    K  EL L    L+ +P
Sbjct: 347 EI--GKLQKL-------------QELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLP 391

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +  ++ KL L  N +  LP E+ +   L+ L L  NK+   P  I  +L  L  L 
Sbjct: 392 EEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEI-GNLQKLKWLY 450

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N L+ +P +   ++  L+ LDLS N + ++PE     +L  L+ L L   QL   P 
Sbjct: 451 LTFNQLKTLPKE-IGNLQKLRGLDLSDNQLTTIPEE--IGNLQKLRGLDLSDNQLTTLPK 507

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I  LQ L +L LS N L ++P+  +NL SL  L+LS+N +++ P E+
Sbjct: 508 EIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEI 555



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 231/528 (43%), Gaps = 81/528 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L N  L   P E+ K                LQKL LAHN +  L +++  L  L VL
Sbjct: 127 LRLPNNQLTTFPKEIEK-------------LQKLQKLSLAHNQLTTLPKEIGKLQKLKVL 173

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  I +L  LK L +  N    +P EI     L     ++NQLK LP  +
Sbjct: 174 NLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEI 233

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     +NN + +LP+++     +  L +  N+LT L                  
Sbjct: 234 GKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTL------------------ 275

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L LH N++ ++P  I     L      +N L+ LP E+ KL 
Sbjct: 276 ------PKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQ 329

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDLHSNQL     E  +L +L  L LS+N L+ LP EIGK+  L++L L  N L T
Sbjct: 330 NLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTT 389

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   +        L    +R                                    L+ +
Sbjct: 390 LPEEIGKLQKLKKLYLYNNR------------------------------------LTTL 413

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI    ++  LDL  N +  LP E+ +   L+ L L+ N++K  P  I  +L  L  L
Sbjct: 414 PKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEI-GNLQKLRGL 472

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  +P +   ++  L+ LDLS N + +LP+     +L  L+ LYL   QL   P
Sbjct: 473 DLSDNQLTTIPEE-IGNLQKLRGLDLSDNQLTTLPKE--IGNLQDLEVLYLSGNQLTTLP 529

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            +I  LQ L  L+LS N L S PE    L  L  L L   NI  L P+
Sbjct: 530 KEIENLQSLESLNLSNNPLTSFPEEIGKLQHLKWLRLE--NIPTLLPQ 575



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV----------DLQKLILAHNNIEKLKE 62
            L+L+N  L  +P E+ K  +  G G  + +             LQ L    N +  L +
Sbjct: 264 GLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPK 323

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +++ L  L  L++  N+L+ L   IG+L  L+ L +S N +  +P EIG    L +    
Sbjct: 324 EIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLG 383

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL----SNN 178
            NQL  LP  +G+   L      NN +T+LP+++ +  K+  LD+  NKLT L     N 
Sbjct: 384 DNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNL 443

Query: 179 LIASWTMLT------------------ELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
               W  LT                   L  S N L  +PE IG+L +L  LDL  N++ 
Sbjct: 444 QKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLT 503

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
           ++P  I     L   Y+  N L+ LP E+  L                        L  L
Sbjct: 504 TLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQ----------------------SLESL 541

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +LSNN L+  P EIGK+  L+ L L   P
Sbjct: 542 NLSNNPLTSFPEEIGKLQHLKWLRLENIP 570


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 250/532 (46%), Gaps = 56/532 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 17  LDLSNQGLTSIPEEVF-------------DITDLEALDVSNNKLTSIPEAIGRLQKLYRL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + + N L+ LP AI  L  LK L V  N++ ++PD +     L       N+LK+LP+ +
Sbjct: 64  DANGNMLTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKI 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L  L    
Sbjct: 124 FSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSG-VCSLPNLELLSVGN 182

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +P  +    +L       N  S  P  + KL 
Sbjct: 183 NKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQ 242

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L +H NQL E     C L  L VLD+ NN L   PP + K+  LR+L + GN L  
Sbjct: 243 KLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTE 302

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + S + + P   +L  + ++                                    LS  
Sbjct: 303 VPSGVRSLPNLEVLSVVNNK------------------------------------LSTF 326

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  + +  ++TKL ++ N + E+P  + S  +L+ L++  N +  +P  +   L  L  L
Sbjct: 327 PPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGV-EKLQKLREL 385

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
           ++  N L +VP  G   +P L++L +  N +++ P  P    L  L+EL +   QL E P
Sbjct: 386 RIYGNQLTEVPP-GVCSLPNLEVLHVYNNKLSTFP--PGVEKLQKLRELRIHDNQLTEVP 442

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + +  L  L +L +  N + + P G + LT L EL ++ N ++ +P  + S+
Sbjct: 443 SRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVCSL 494



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 226/496 (45%), Gaps = 41/496 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N +      +  L  L +L +  N+L+E+P  +  L  L+SL+ + N    
Sbjct: 174 NLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFST 233

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN + + P  +    K+ +L
Sbjct: 234 FPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLREL 293

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  +PS 
Sbjct: 294 YIYGNQLTEVPSG-VRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSG 352

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +    +L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL + N
Sbjct: 353 VCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYN 412

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N LS  PP + K+  LR+L +  N L  + S + + P   +L    +++         +T
Sbjct: 413 NKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKV---------ST 463

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +   T+L    +EL + G  L+ +PS +     + KL +  N I+ LP +++  A 
Sbjct: 464 FPPGVEKLTKL----RELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLAR 519

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L +   +  ++P  +L  L +L  L         VP D   ++  L  L L YN+  
Sbjct: 520 LKALSVPNCQFDEFPRQVL-QLKTLEVLYAGGCKFDMVP-DEVGNLQHLCYLSLEYNL-- 575

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
                                 LR  P+ +  L  LR++ L++N   + PE    L ++ 
Sbjct: 576 ----------------------LRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAME 613

Query: 525 ELDLSDNNISALPPEL 540
           +LD+S+NNI+ LP  L
Sbjct: 614 KLDISNNNITRLPTAL 629



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 152/352 (43%), Gaps = 16/352 (4%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
           SG  +L N  L  V N +   F    E     +   L++L +  N + ++   + +LP L
Sbjct: 351 SGVCSLPNLELLVVGNNMLSTFPPGVE-----KLQKLRELRIYGNQLTEVPPGVCSLPNL 405

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            VL+V +NKLS  P  + +L  L+ L +  N + ++P  + S   L      +N++   P
Sbjct: 406 EVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFP 465

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             + +   L +   + N +T +P  +     + KL V GN +  L ++ +     L  L 
Sbjct: 466 PGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDD-VTRLARLKALS 524

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                 +  P  +  L  L  L     +   +P  +     L    +  N L  LP+ + 
Sbjct: 525 VPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMS 584

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L  L  + L+ N+   +    C+L  +  LD+SNN+++ LP  + +   LR L ++GNP
Sbjct: 585 HLHNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLRDLDVSGNP 644

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           L      +    T A++ +L+         EA   K+ ++    RLSV + +
Sbjct: 645 LAYPPQDVCEQGTGAIMAFLK--------QEADKEKK-ILRAFNRLSVRASQ 687


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 238/499 (47%), Gaps = 43/499 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L +N +  L +++  L  L  L +S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 63  NLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTT 122

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG+   L +    +NQL  LP  +G   +L +   +NN + +LP+++     +  L
Sbjct: 123 IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDL 182

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V  N+L  L    I +   L  L  + N L  +P+ IG L  L  L++  N+++++P  
Sbjct: 183 NVFNNQLITLPQE-IGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQE 241

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    + NN L  LP E+G L KL  L L +NQL     E  +L RL  L L+N
Sbjct: 242 IGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLAN 301

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIGK+  L++L+L  N L +    +  G    L                   
Sbjct: 302 NQLKSLPQEIGKLQNLKELILENNRLESFPKEI--GTLSNL------------------- 340

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          + L LE    + +P EI     +  L+L  N +  LP E+     
Sbjct: 341 ---------------QRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLER 385

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L L  N++   P  I T L  L  L L NN L  +P +    +  L+ LDL YN +A
Sbjct: 386 LEWLNLYNNRLATLPKEIGT-LRKLQHLYLANNQLATLPKE-IGQLQNLEDLDLEYNQLA 443

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +LPE     +L  L+ L L+  QL   P +I  LQ++  L+L+ N L+++P+    L +L
Sbjct: 444 TLPE--AIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQLQNL 501

Query: 524 TELDLSDNNISALPPELVS 542
            +LDLS N  +  P E+V 
Sbjct: 502 KDLDLSGNPFTTFPQEIVG 520



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 231/494 (46%), Gaps = 46/494 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L H N   L E L+N   + +L+++ N+L+ LP  IG+L  L SL +  N +  +P EI 
Sbjct: 26  LYHRN---LNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIE 82

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L     S NQL  LP  +G+   L       N +T++P+++     + +L +  N+
Sbjct: 83  TLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQ 142

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I +   L EL  + N L  +P+ IG+L  L  L++  N+++++P  I    +
Sbjct: 143 LITLPQE-IGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQN 201

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    +  N L+ LP E+G+L  L  L++ +NQL     E   L+ L  L+L NN L  L
Sbjct: 202 LKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITL 261

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG +  L  L LT N L TL                                   I 
Sbjct: 262 PKEIGTLQKLEWLYLTNNQLATLPKE--------------------------------IG 289

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
              RL      L L    L ++P EI +   + +L L  N ++  P E+ + ++LQ L L
Sbjct: 290 KLQRLEW----LGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHL 345

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             N     P  I T L  L  L L++N L  +P +    +  L+ L+L  N +A+LP+  
Sbjct: 346 EYNGFTTLPQEIGT-LHRLPWLNLEHNQLTTLPQE-IGRLERLEWLNLYNNRLATLPKE- 402

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              +L  LQ LYL   QL   P +I +LQ L  LDL  N L ++PE    L  L  L L 
Sbjct: 403 -IGTLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLK 461

Query: 530 DNNISALPPELVSV 543
           +N ++ LP E+ ++
Sbjct: 462 NNQLTTLPEEIGTL 475


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 167/521 (32%), Positives = 249/521 (47%), Gaps = 29/521 (5%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY +F +A +       ++++ L L+ N +  L  ++  L  L  LN+ +N+LS L  
Sbjct: 24  NKVYHDFSDALKN-----PMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ L +  N +  +P++IG    L   +  +NQL  L   +G    L      
Sbjct: 79  EIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLK 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + SLP  +    K+  L++E N+L VL    I +   L  L    N L  +P  IG 
Sbjct: 139 NNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGK 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L  L+L  N++  +   I     L    + NN L+ LP E+GKL KL  L L +N+L
Sbjct: 198 LRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKL 257

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E   L RL  L L NN L  LP EI K+  L+ L L  N  RTL   +       
Sbjct: 258 GSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEI------- 310

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEI 382
                  +L   E  + S  +  L+T+   +      K L L+   L+ +P EI +   +
Sbjct: 311 ------DQLQNLEGLDVSNNQ--LVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENL 362

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L LS N +  LP E+ +   LQ L LS N+++  P  I T L  L  L L++N L  +
Sbjct: 363 ESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGT-LQELEWLNLEHNQLAAL 421

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P +    +  L+ L LS N + +LP+      L  L+ LYL+  +L   P +I +LQ L 
Sbjct: 422 PQE-IDQLQNLEDLILSNNRLKTLPK--EIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLE 478

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            LDLS N L+++P     L SL +LDLS N  +  P E+V 
Sbjct: 479 YLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFATFPKEIVG 519



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 226/463 (48%), Gaps = 38/463 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +PN++ K                L+ L L +N +  L +++  L  L  L
Sbjct: 89  LSLKNNRLESLPNKIGK-------------LRKLEHLNLENNQLAVLVQEIGTLQKLEWL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L  LP  IG+L  L+ L++  N +  +  EIG+   L      +N+L+ LP+ +
Sbjct: 136 SLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L      +N +  L +++    K+  L +E N+LTVL    I     L  L    
Sbjct: 196 GKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQE-IGKLQKLEVLCLKN 254

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L RL  L L  NR+ ++P  I    +L + Y+G+N    LP E+ +L 
Sbjct: 255 NKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQ 314

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LD+ +NQL     E  +L+ L  L L +N L+ LP EIG++  L  L+L+ N L T
Sbjct: 315 NLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTT 374

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   +    T   L+YL        +++  T  +++ T+        + L+LE   L+A+
Sbjct: 375 LPQEI---GTLQKLQYLNL-----SNNQLRTLPQEIGTLQ-----ELEWLNLEHNQLAAL 421

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L LS N ++ LP E+     L+ L L  NK+   P  I   L +L  L
Sbjct: 422 PQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEI-DQLQNLEYL 480

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
            L NN LR +P++    +  L+ LDLS N        PF++ P
Sbjct: 481 DLSNNQLRTLPNE-IGQLQSLEDLDLSGN--------PFATFP 514



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 44/231 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVD---------------LQKLILAHNNI 57
            L++SN  L  +PNE++K      +  KW    D               L+ LIL++N +
Sbjct: 318 GLDVSNNQLVTLPNEIWK-----LQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQL 372

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
             L +++  L  L  LN+S+N+L  LP  IG L  L+ L++  N +  +P EI     L 
Sbjct: 373 TTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLE 432

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               S+N+LK LP  + +   L      NN + SLP+++     +  LD+  N+L  L  
Sbjct: 433 DLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTL-- 490

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                                 P  IG L  L  LDL  N   + P  I G
Sbjct: 491 ----------------------PNEIGQLQSLEDLDLSGNPFATFPKEIVG 519


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 159/473 (33%), Positives = 230/473 (48%), Gaps = 43/473 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++S NKL+ LP  IG+L  L+SL +  N +  +P EIG  T L      +N+L  L
Sbjct: 409 VTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 468

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+  NL      NN ++SLP ++   + +  L +  NKL+ L    I   T L   
Sbjct: 469 PAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAE-IGQLTNLQSF 527

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                LL+ +P  IG L+ L    L    + S+P+ I    +L  FY+ N  LS+LPA +
Sbjct: 528 YLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANI 587

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L+ L +L L SNQL     E  QL  L  L L NN LS LP EIG++T L+ L L  N
Sbjct: 588 FQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNN 647

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L +                                 I   T L    + L L    
Sbjct: 648 KLSSLPAE--------------------------------IGQLTNL----QTLYLFNNK 671

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS++P+EI +   +  L L  N +  LP E+    +LQTL L  N++   P A +  L++
Sbjct: 672 LSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLP-AEIGQLTN 730

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L NN L  +P++    +  LQ L L  N ++SLP       L +LQ LYL   QL
Sbjct: 731 LQSLYLFNNKLSSLPAE-IGQLTNLQSLYLFNNQLSSLPAE--IGQLTNLQSLYLDNNQL 787

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I +L  L+ L L  N L S+P G   LT+L  L L +N +++LP E+
Sbjct: 788 SSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEI 840



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 145/437 (33%), Positives = 212/437 (48%), Gaps = 35/437 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+              +  +LQ L L +N +  L  ++  L  L  
Sbjct: 434 SLYLDNNQLSSLPAEI-------------GQLTNLQSLYLFNNKLSSLPAEIGQLTNLQT 480

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+LS LPA IG+L  L+SL +  N +  +P EIG  T L  F   +  L  LP+ 
Sbjct: 481 LYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAE 540

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL  F   N  ++SLP ++   + +    ++   L+ L  N I   T L  L  S
Sbjct: 541 IGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAN-IFQLTNLQSLYLS 599

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +   IG L+ L  L L  N++ S+P+ I    +L   Y+ NN LS+LPAE+G+L
Sbjct: 600 SNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQL 659

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L TL L +N+L     E  QL  L  L L NN LS LP EIG++T L+ L L  N L 
Sbjct: 660 TNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLS 719

Query: 312 TLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           +L +    L N  +  L     S LP              I   T L    + L L    
Sbjct: 720 SLPAEIGQLTNLQSLYLFNNKLSSLPAE------------IGQLTNL----QSLYLFNNQ 763

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS++P+EI +   +  L L  N +  LP E+    +LQ+L L  N++   P  I   L++
Sbjct: 764 LSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGI-GQLTN 822

Query: 429 LSCLKLDNNPLRQVPSD 445
           L  L LDNN L  +P++
Sbjct: 823 LQTLYLDNNQLNSLPTE 839



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 3/300 (1%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++  +LQ L L+ N +  L+ ++  L  L  L + +NKLS LPA IG+L  L++L +  N
Sbjct: 588 FQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNN 647

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG  T L      +N+L  LP+ +G+  NL      NN ++SLP ++   + 
Sbjct: 648 KLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTN 707

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L ++ N+L+ L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S
Sbjct: 708 LQTLYLDNNQLSSLPAE-IGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSS 766

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P+ I    +L   Y+ NN LS+LPAE+G+L+ L +L L +NQL        QL  L  L
Sbjct: 767 LPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTL 826

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLT-GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
            L NN L+ LP EIG++ +  K LL  GNPL++L   +    + A+L + + +L +  D+
Sbjct: 827 YLDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQLEQTIDN 886



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 17/291 (5%)

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLV 318
           SN   EY        ++ LDLS N L+ LPP IG++T L+ L L  N L +L +    L 
Sbjct: 394 SNGYGEYIAPQSLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLT 453

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNL 369
           N  +  L     S LP   +    T  + L     +LS    E         L L    L
Sbjct: 454 NLQSLYLFNNKLSSLP--AEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKL 511

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           S++P+EI +   +    L    +  LP E+    +LQ+  L    +   P A +  L++L
Sbjct: 512 SSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLP-AEIGQLTNL 570

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
               LDN  L  +P++ F+ +  LQ L LS N  S+ +      L +LQ LYL   +L  
Sbjct: 571 QSFYLDNTLLSSLPANIFQ-LTNLQSLYLSSNQLSILQ-AEIGQLTNLQSLYLFNNKLSS 628

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L  L+ L L  N L S+P     LT+L  L L +N +S+LP E+
Sbjct: 629 LPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEI 679


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/439 (33%), Positives = 214/439 (48%), Gaps = 43/439 (9%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P EIG  T+L K +   N L  +P+ + +   L + K  NN +TSLP ++   +
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + +L +  NKLT+     I   T LTEL+   N L  +P  IG L+ L  L LH N++ 
Sbjct: 63  SLRELYLCNNKLTIAPAE-IGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLT 121

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +P+ I    +L   ++  N L++LPAE+G+L+ L  L L++N+L     E  QL  L  
Sbjct: 122 GVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEA 181

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  N L+ +P EIG++T+L KL L  N L ++         PA +  L S        
Sbjct: 182 LYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSV---------PAEIGQLTSL------- 225

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               K L L G  L+++P+EI +   +T L L  N +  LP E+
Sbjct: 226 --------------------KALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEI 265

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               SL+ L L  N++   P  I   L+SL  L L  N L  VP++    +  L  L L 
Sbjct: 266 GQLTSLEALWLHDNQLTSVPAEI-GQLTSLKELWLHGNRLTSVPAE-IGQLTSLGALSLY 323

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N + SLPE      L  L  LYL R QL   P +I +L  L  L L  N L SIP    
Sbjct: 324 NNRLTSLPEE--IGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIA 381

Query: 519 NLTSLTELDLSDNNISALP 537
            LTSL+ LDLS N ++++P
Sbjct: 382 QLTSLSVLDLSGNQLTSVP 400



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 217/448 (48%), Gaps = 49/448 (10%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L+ LPA IG+L  L  L++  N +  +P EI   T L +    +NQL  LP+ +G+  
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L +    NN +T  P ++   + +++L + GN+LT +    I   T L EL    N L 
Sbjct: 63  SLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAE-IGLLTSLRELYLHDNQLT 121

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           G+P  I  L+ L  L LH N++ S+P+ I    SL    + NN L++LPAE+G+L+ L  
Sbjct: 122 GVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEA 181

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L LH NQL     E  QL  L  L+L +N L+ +P EIG++T+L+ L L GN L +L   
Sbjct: 182 LYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSL--- 238

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 PA +  L S                              L L    L+++P+EI
Sbjct: 239 ------PAEIGQLTSL---------------------------TGLRLYNNRLTSLPAEI 265

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
            +   +  L L  N +  +P E+    SL+ L L  N++   P  I   L+SL  L L N
Sbjct: 266 GQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEI-GQLTSLGALSLYN 324

Query: 437 NPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           N L  +P    ++I  L  LD  Y     + S+PE      L  L  LYL   QL   P 
Sbjct: 325 NRLTSLP----EEIGQLTSLDRLYLGRNQLMSVPEE--IGQLSSLLWLYLGSNQLTSIPA 378

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNL 520
           +I +L  L +LDLS N L S+P   + L
Sbjct: 379 EIAQLTSLSVLDLSGNQLTSVPAAIREL 406



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 210/426 (49%), Gaps = 41/426 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L KL L  N++  +  ++  L  L  L + +N+L+ LPA IG+L  L+ L +  N 
Sbjct: 14  QLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNK 73

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +   P EIG  TAL +     NQL  +P+ +G   +L +    +N +T +P ++   + +
Sbjct: 74  LTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTL 133

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L + GN+LT L    I   T LT L    N L  +P  IG L+ L  L LH N++ S+
Sbjct: 134 EALWLHGNQLTSLPAE-IGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSV 192

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P+ I    SL +  + +N L+++PAE+G+L+ L  L L  NQL     E  QL  L+ L 
Sbjct: 193 PAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLR 252

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L NN L+ LP EIG++T+L  L L  N L ++         PA +  L S          
Sbjct: 253 LYNNRLTSLPAEIGQLTSLEALWLHDNQLTSV---------PAEIGQLTSL--------- 294

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             KEL L G  L+++P+EI +   +  L L  N +  LP E+  
Sbjct: 295 ------------------KELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQ 336

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             SL  L L RN++   P+ I   LSSL  L L +N L  +P++    +  L +LDLS N
Sbjct: 337 LTSLDRLYLGRNQLMSVPEEI-GQLSSLLWLYLGSNQLTSIPAE-IAQLTSLSVLDLSGN 394

Query: 462 -IASLP 466
            + S+P
Sbjct: 395 QLTSVP 400



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 190/374 (50%), Gaps = 20/374 (5%)

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           GN+LT L    I   T LT+L   +N L  +P  I  L+ L  L L+ N++ S+P+ I  
Sbjct: 2   GNQLTSLPAE-IGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQ 60

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             SL E Y+ NN L+  PAE+G+L+ L  L LH NQL     E   L  L  L L +N L
Sbjct: 61  LTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQL 120

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           +G+P EI ++TTL  L L GN L +L + +    +   L+   +RL         T+   
Sbjct: 121 TGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRL---------TSLPA 171

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            I   T L    + L L G  L+++P+EI +   + KL+L  N +  +P E+    SL+ 
Sbjct: 172 EIGQLTSL----EALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKA 227

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L  N++   P  I   L+SL+ L+L NN L  +P++    +  L+ L L  N + S+P
Sbjct: 228 LWLFGNQLTSLPAEI-GQLTSLTGLRLYNNRLTSLPAE-IGQLTSLEALWLHDNQLTSVP 285

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  L  L+EL+L   +L   P +I +L  L  L L  N L S+PE    LTSL  L
Sbjct: 286 AE--IGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRL 343

Query: 527 DLSDNNISALPPEL 540
            L  N + ++P E+
Sbjct: 344 YLGRNQLMSVPEEI 357



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 161/319 (50%), Gaps = 24/319 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L +  L  VP E+ +                L+ L L  N +  L  ++  L  LT L
Sbjct: 113 LYLHDNQLTGVPAEIVQ-------------LTTLEALWLHGNQLTSLPAEIGQLTSLTGL 159

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ LPA IG+L  L++L +  N +  +P EIG  T+L K +   NQL  +P+ +
Sbjct: 160 RLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEI 219

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L       N +TSLP ++   + ++ L +  N+LT L    I   T L  L    
Sbjct: 220 GQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAE-IGQLTSLEALWLHD 278

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L LH NR+ S+P+ I    SL    + NN L++LP E+G+L+
Sbjct: 279 NQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLT 338

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L +N L+ +P EI ++T+L  L L+GN L +
Sbjct: 339 SLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLTSLSVLDLSGNQLTS 398

Query: 313 LRSSLVNGPTPALLKYLRS 331
           +         PA ++ LR+
Sbjct: 399 V---------PAAIRELRA 408



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 21/272 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L N  L  +P E+              +   L+ L L  N +  +  ++  L  L  
Sbjct: 158 GLRLYNNRLTSLPAEI-------------GQLTSLEALYLHGNQLTSVPAEIGQLTSLEK 204

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +PA IG+L  LK+L +  N +  +P EIG  T+L      +N+L  LP+ 
Sbjct: 205 LELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAE 264

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L      +N +TS+P ++   + + +L + GN+LT +    I   T L  L   
Sbjct: 265 IGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAE-IGQLTSLGALSLY 323

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +PE IG L+ L RL L +N+++S+P  I    SL   Y+G+N L+++PAE+ +L
Sbjct: 324 NNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQL 383

Query: 253 SKLGTLDLHSNQL-------KEYCVEACQLRL 277
           + L  LDL  NQL       +E     C +R+
Sbjct: 384 TSLSVLDLSGNQLTSVPAAIRELRAAGCDVRM 415



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 26/154 (16%)

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    SL  L L RN +   P  I+  L++L  LKL NN L  +P++    
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIV-QLTTLQELKLYNNQLTSLPAE---- 57

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
                                   L  L+ELYL   +L  AP +I +L  L  L L  N 
Sbjct: 58  ---------------------IGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQ 96

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L S+P     LTSL EL L DN ++ +P E+V +
Sbjct: 97  LTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQL 130


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 179/541 (33%), Positives = 267/541 (49%), Gaps = 34/541 (6%)

Query: 3   RILKAARTSGS-LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           RI +A  T  S L+L   SL  +P E+              +   L+ L L  N + +L 
Sbjct: 31  RIQQALATQASQLDLQGLSLTQLPLEI-------------GQLKHLEVLNLRDNQLSRLP 77

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++  L  LT L++  N+L+ LPA + +L  L  L + FN +  +P E+     L   D 
Sbjct: 78  PEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDL 137

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           ++NQL  LPSS+ +   L     SNN + SLP ++A  +K+ +LD+  N+L+ L   +I 
Sbjct: 138 TANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIK 197

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L    N L+ +P TI  L+ L +LDL    +  +P  I     L E  + +N 
Sbjct: 198 -LNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNK 256

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           LS+LP E+ +L  L +L L   QL     E  QL  L  LDLS NSLS LP E+ K+  L
Sbjct: 257 LSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKL 316

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           +KL L+ N LR L + +        L  LRS        +  +T+ + +       +  +
Sbjct: 317 QKLDLSYNSLRNLPTVITQ------LTTLRSL-------DLRSTQLNSLPPEIAQLINLQ 363

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L L    L+ +P EI     + KL+LS+  +  LPP +     LQ+L  S N++   P 
Sbjct: 364 SLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPI 423

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            I T + SL  L L  N L ++P+D    +  LQ LDL  N + SLP+      L +L+ 
Sbjct: 424 EI-TQIISLKELNLSFNQLSKLPAD-IGQLNNLQELDLRENKLDSLPKE--IGQLNNLKS 479

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L LR  QL   P DI +L+ L+ L +  N+L S+P     L+SL  L L  N +S+LPPE
Sbjct: 480 LVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPE 539

Query: 540 L 540
           +
Sbjct: 540 I 540



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 256/522 (49%), Gaps = 41/522 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L KL L  N +  L  ++  L  L  L+++ N+L+ LP+++ +L  L++LD+S N 
Sbjct: 105 QLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNW 164

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EI     L + D   NQL  LP  + +  NL      +N ++SLP  +A  + +
Sbjct: 165 LKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNL 224

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            KLD+    L  L    I   T L EL  S N L+ +P  I  L  L  L L   ++   
Sbjct: 225 KKLDLRATSLKRLPPE-ILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHP 283

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELG-----------------------KLSKLGTLD 259
           P+ +S    L E  +  N+LS+LP E+                        +L+ L +LD
Sbjct: 284 PAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLD 343

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L S QL     E  QL  L  LDL +N L+ LP EIG +T L+KL L+       ++ L 
Sbjct: 344 LRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLS-------KTQLT 396

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
           N P PA++K  R +  +   ++ S+   ++  +     ++ KEL+L    LS +P++I +
Sbjct: 397 NLP-PAIMKLKRLQSLDFSGNQLSSLPIEITQI-----ISLKELNLSFNQLSKLPADIGQ 450

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + +LDL  N +  LP E+    +L++L+L  N++   P  I   L +L  L +  N 
Sbjct: 451 LNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDI-GQLKNLKSLSIHGNT 509

Query: 439 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           L  +P +  K   +  ++  S  ++SLP  P    L +L  L L   QL   P ++ +LQ
Sbjct: 510 LSSLPPEIGKLSSLKSLILRSNRLSSLP--PEIGKLHNLNSLNLVENQLSSLPIEMRKLQ 567

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            LR LDL  N L+++P     L SL  +DLSDN +S LP E+
Sbjct: 568 NLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEM 609



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/393 (34%), Positives = 199/393 (50%), Gaps = 28/393 (7%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A  ++ S+LD++G  LT L    I     L  L    N L+ +P  IG L  L  LDL  
Sbjct: 35  ALATQASQLDLQGLSLTQLPLE-IGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCS 93

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NR+  +P+ ++   +L++  +  N LS LP E+ +L  L +LDL +NQL        QL+
Sbjct: 94  NRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLK 153

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSR 332
            L  LDLSNN L  LPPEI ++  LR+L L  N L  L   ++   N  T  L     S 
Sbjct: 154 ELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSS 213

Query: 333 LPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           LP                 AT   +T+ K+L L   +L  +P EI +  ++ +LDLS N 
Sbjct: 214 LP-----------------ATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNK 256

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LPPE++   +LQ+L L   ++   P A L+ L+ L  L L  N L  +P +    + 
Sbjct: 257 LSSLPPEIAQLVNLQSLRLKFTQL-SHPPAELSQLTHLQELDLSGNSLSSLPRE-MAKLK 314

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            LQ LDLSYN + +LP     + L  L+ L LR  QL   P +I +L  L+ LDL  N L
Sbjct: 315 KLQKLDLSYNSLRNLPT--VITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPL 372

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             +P+    LT L +L+LS   ++ LPP ++ +
Sbjct: 373 THLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKL 405



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 196/434 (45%), Gaps = 53/434 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L   SL+ +P E+              +   LQ+L L+ N +  L  ++  L  L  L
Sbjct: 227 LDLRATSLKRLPPEI-------------LQLTKLQELDLSDNKLSSLPPEIAQLVNLQSL 273

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +   +LS  PA + +L  L+ LD+S NS+  +P E+     L K D S N L+ LP+ +
Sbjct: 274 RLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVI 333

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L      +  + SLP ++A    +  LD+  N LT L    I + T L +L  SK
Sbjct: 334 TQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQE-IGTLTHLKKLNLSK 392

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L  +P  I  L RL  LD   N++ S+P  I+   SL E  +  N LS LPA++G+L+
Sbjct: 393 TQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLN 452

Query: 254 KLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLSG 289
            L  LDL  N+L     E  QL                         L  L +  N+LS 
Sbjct: 453 NLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSS 512

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LPPEIGK+++L+ L+L  N L +L       P    L  L S  L EN+ S        L
Sbjct: 513 LPPEIGKLSSLKSLILRSNRLSSL------PPEIGKLHNLNSLNLVENQLSSLPIEMRKL 566

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             +        +EL L    L  +P E+ +   +  +DLS N +  LP E+    +L  L
Sbjct: 567 QNL--------RELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVL 618

Query: 409 ILSRNKIKDWPDAI 422
            L RN++ + P  I
Sbjct: 619 SLDRNQLSNLPIEI 632



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 137/267 (51%), Gaps = 2/267 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L+KL L+   +  L   +  L  L  L+ S N+LS LP  I ++  LK L++SFN + 
Sbjct: 383 THLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLS 442

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P +IG    L + D   N+L  LP  +G+  NL       N + +LP D+     +  
Sbjct: 443 KLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKS 502

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L + GN L+ L    I   + L  LI   N L+ +P  IG L  L  L+L +N++ S+P 
Sbjct: 503 LSIHGNTLSSLPPE-IGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPI 561

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            +    +L E  + NN L  LP E+G+L  LG +DL  NQL     E  QL  L+VL L 
Sbjct: 562 EMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLD 621

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            N LS LP EI ++    K+ + GNPL
Sbjct: 622 RNQLSNLPIEIEQLWPSTKITVEGNPL 648



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 124/272 (45%), Gaps = 34/272 (12%)

Query: 14  LNLSNRSLRDVPNEVYK-----NFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKED 63
           LNLS   L ++P  + K     + D +G        +  + + L++L L+ N + KL  D
Sbjct: 388 LNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPAD 447

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++  NKL  LP  IG+L+ LKSL + FN +  +P +IG    L       
Sbjct: 448 IGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHG 507

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP  +G+  +L      +N ++SLP ++     ++ L++  N+L+          
Sbjct: 508 NTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLS---------- 557

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                          +P  +  L  L  LDL  NR+ ++P  +    SL    + +N LS
Sbjct: 558 --------------SLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLS 603

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            LP E+G+L  L  L L  NQL    +E  QL
Sbjct: 604 NLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQL 635


>gi|110763972|ref|XP_395550.3| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           mellifera]
          Length = 602

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 171/589 (29%), Positives = 274/589 (46%), Gaps = 109/589 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVY----------KNF----DEAGEGDKWWE------ 43
           I+ +AR +G+LNLS++ L  VP+ V+          KN     D   + ++WWE      
Sbjct: 30  IIISARKNGNLNLSSKGLFTVPDRVWTINDLTEEEIKNLHVELDYIHDNERWWEQEPLKM 89

Query: 44  ---------AVD--------LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
                    A+D        L  L L +N +E L  ++ NL  L +LN+S+NKL +LP  
Sbjct: 90  LDLSCNSLKAIDSKIECLTELTTLYLHNNLLEDLPIEIGNLKKLEILNLSNNKLEKLPHE 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
             +L  L+ L +  N+I ++    G    L   D S N L ELP  +G  + L     ++
Sbjct: 150 FYKLIELRQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLTELPIGMGYLVRLISLDLNH 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +  LP DL +   + KL+   N L +L                           +G L
Sbjct: 210 NILKELPPDLTNMRALQKLNASYNDLEILP-------------------------PLGEL 244

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQL 265
            ++  + L  N++ + P  +SGC  L   ++ +N ++ +    L  + +L TL L +NQ+
Sbjct: 245 RKVETVMLQTNKLTTFP-DMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQI 303

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +    E  +L  L + DLS N ++ +P  IG M  +++L++ GN ++ +R+ ++   T  
Sbjct: 304 ESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCGTSR 363

Query: 325 LLKYLRSRLPE-NEDSEASTT-------KEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +LKY++  L   N DS+   T         D  TM      ++K LSL G NL+ IP E+
Sbjct: 364 ILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMH-----STKLLSLAGQNLTEIPQEV 418

Query: 377 WE---AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            E     ++  +DLSRN+   LP EL                      I+T ++    LK
Sbjct: 419 LENACKADVGTVDLSRNNFSTLPDELH---------------------IITKVAD---LK 454

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L +N L  +P    +    LQILDLS N + SLP N     L +LQEL +   + +E P 
Sbjct: 455 LTSNQLTHIPEWICEKYKYLQILDLSKNCLESLPSN--IGLLKYLQELNISFNRYKEIPE 512

Query: 493 DILRLQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPEL 540
            +  +  L IL  + N + +I     + L  LT L+L++NNI  +PPEL
Sbjct: 513 SVYDVSSLEILIANDNLITNIDILSLQKLQKLTILNLANNNIGYIPPEL 561



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 205/477 (42%), Gaps = 94/477 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLSN  L  +P+E YK              ++L++L L +NNI++L     +  +LT L
Sbjct: 136 LNLSNNKLEKLPHEFYK-------------LIELRQLSLKNNNIKQLDPAFGDFIMLTYL 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L+ELP  +G L  L SLD++ N + ++P ++ +  AL K + S N L+ LP  L
Sbjct: 183 DLSYNNLTELPIGMGYLVRLISLDLNHNILKELPPDLTNMRALQKLNASYNDLEILPP-L 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT----------------VLSN 177
           G    +       N +T+ P D++ C ++  L +  N +T                 L N
Sbjct: 242 GELRKVETVMLQTNKLTTFP-DMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGN 300

Query: 178 NLIAS-------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           N I S          L     S N +  +PE IG +  + +L +  N I +I + I  C 
Sbjct: 301 NQIESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCG 360

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGT--------LDLHSNQL------------KEYCV 270
           +          L +   +  K   L T          +HS +L            +E   
Sbjct: 361 TSRILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLE 420

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------------- 313
            AC+  +  +DLS N+ S LP E+  +T +  L LT N L  +                 
Sbjct: 421 NACKADVGTVDLSRNNFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYKYLQILDLS 480

Query: 314 RSSLVNGPTP-ALLKYLR------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
           ++ L + P+   LLKYL+      +R  E  +S    +  +++     L      LSL+ 
Sbjct: 481 KNCLESLPSNIGLLKYLQELNISFNRYKEIPESVYDVSSLEILIANDNLITNIDILSLQK 540

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           +             ++T L+L+ N+I  +PPEL +  +L+ L LS N  K    AIL
Sbjct: 541 LQ------------KLTILNLANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAIL 585



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 63/331 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++S+NK++ +P  IG +  +K L +  N I  I
Sbjct: 293 LKTLTLGNNQIESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNI 352

Query: 107 PDEI---GSATAL-----------------VKFDCSSN-------------------QLK 127
             +I   G++  L                 V  + S+N                    L 
Sbjct: 353 RTDIIRCGTSRILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLT 412

Query: 128 ELPSSL--GRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           E+P  +    C  ++     S N  ++LP++L   +K++ L +  N+LT +   +   + 
Sbjct: 413 EIPQEVLENACKADVGTVDLSRNNFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYK 472

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  SKN L  +P  IG L  L  L++  NR   IP S+    SL E  + N+ L  
Sbjct: 473 YLQILDLSKNCLESLPSNIGLLKYLQELNISFNRYKEIPESVYDVSSL-EILIANDNL-- 529

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                  ++ +  L L   Q           +L++L+L+NN++  +PPE+G +  LR L 
Sbjct: 530 -------ITNIDILSLQKLQ-----------KLTILNLANNNIGYIPPELGNLKNLRNLS 571

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 572 LSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 41/303 (13%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+L A+ +++  L++L TL LH+N L++  +E   L+ L +L+LSNN L  LP E  K+ 
Sbjct: 95  NSLKAIDSKIECLTELTTLYLHNNLLEDLPIEIGNLKKLEILNLSNNKLEKLPHEFYKLI 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR+L L  N ++ L         PA   ++                     M T L ++
Sbjct: 155 ELRQLSLKNNNIKQL--------DPAFGDFI---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                    NL+ +P  +     +  LDL+ N ++ELPP+L++  +LQ L  S N ++  
Sbjct: 186 YN-------NLTELPIGMGYLVRLISLDLNHNILKELPPDLTNMRALQKLNASYNDLEIL 238

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P   L  L  +  + L  N L   P         L+IL L+ N  +  +      +  L+
Sbjct: 239 PP--LGELRKVETVMLQTNKLTTFPD--MSGCIQLRILHLADNNITEIDMSCLEGVGQLK 294

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   Q+   P +I++L  L I DLS N +  IPE    + ++ +L +  N+I  +  
Sbjct: 295 TLTLGNNQIESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRT 354

Query: 539 ELV 541
           +++
Sbjct: 355 DII 357



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 188/435 (43%), Gaps = 68/435 (15%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N  E   G  +   V L  L L HN +++L  DL N+  L  LN S+N L  LP  +G
Sbjct: 186 YNNLTELPIGMGY--LVRLISLDLNHNILKELPPDLTNMRALQKLNASYNDLEILPP-LG 242

Query: 89  ELHMLKSLDVSFNSIMKIPDEIG---------SATALVKFDCS--------------SNQ 125
           EL  ++++ +  N +   PD  G         +   + + D S              +NQ
Sbjct: 243 ELRKVETVMLQTNKLTTFPDMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQ 302

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT- 184
           ++ +P  + + + L  F  S N IT +PE +     + +L ++GN +  +  ++I   T 
Sbjct: 303 IESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCGTS 362

Query: 185 ----MLTELIASKNLLNGMPETIGSLSRLI--RLDLHQNRILS--------IPSSI--SG 228
                + + + S NL +    T+ + + +   R  +H  ++LS        IP  +  + 
Sbjct: 363 RILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLENA 422

Query: 229 C-CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSN 284
           C   +    +  N  S LP EL  ++K+  L L SNQL    E+  E  +  L +LDLS 
Sbjct: 423 CKADVGTVDLSRNNFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYKY-LQILDLSK 481

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP  IG +  L++L ++ N  + +  S+ +  +  +L                  
Sbjct: 482 NCLESLPSNIGLLKYLQELNISFNRYKEIPESVYDVSSLEIL----------------IA 525

Query: 345 KEDLITMATRLSVTSKE----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            ++LIT    LS+   +    L+L   N+  IP E+     +  L LS N  ++    + 
Sbjct: 526 NDNLITNIDILSLQKLQKLTILNLANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAIL 585

Query: 401 SCASLQTLILSRNKI 415
             ++ + L   RN+I
Sbjct: 586 MKSTEEILAYLRNRI 600



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           WE   +  LDLS NS++ +  ++     L TL L  N ++D P  I  +L  L  L L N
Sbjct: 82  WEQEPLKMLDLSCNSLKAIDSKIECLTELTTLYLHNNLLEDLPIEI-GNLKKLEILNLSN 140

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L ++P + +K I + Q+   + NI  L  +P F                         
Sbjct: 141 NKLEKLPHEFYKLIELRQLSLKNNNIKQL--DPAFGDFI--------------------- 177

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  LDLS N+L  +P G   L  L  LDL+ N +  LPP+L ++
Sbjct: 178 --MLTYLDLSYNNLTELPIGMGYLVRLISLDLNHNILKELPPDLTNM 222


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 170/574 (29%), Positives = 256/574 (44%), Gaps = 71/574 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 48  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 95  DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 154

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  NL D     N +T+ P+++     +  L +  NKLT      I     L +L  S+
Sbjct: 155 GRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKE-IGQLQNLQKLWLSE 213

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ-----------------------NRILSIPSSISGCC 230
           N L  +P+ IG L  L  LDL                         N++ ++P  I    
Sbjct: 214 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 273

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L NN L+ 
Sbjct: 274 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTV 333

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK---- 345
           LP EIG++  L+ L L  NPL       +    P       S L   E +E    +    
Sbjct: 334 LPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGVYRNLNL 387

Query: 346 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 387
              E L     RL   +               +EL L     S +P EI     +  L L
Sbjct: 388 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 447

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++  
Sbjct: 448 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKIFPAE-I 505

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
           + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ LDL+
Sbjct: 506 EQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLN 563

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 564 DNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 597



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 249/537 (46%), Gaps = 46/537 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     +  
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQD 162

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKLT      I     L +L   KN L   P+ IG L  L +L L +NR+ ++P 
Sbjct: 163 LGLYKNKLTTFPKE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 221

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L L 
Sbjct: 222 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 281

Query: 284 NNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL--- 329
           NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +   
Sbjct: 282 NNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 341

Query: 330 -----------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKELSLE 365
                            R R+ +   + + +     ED +     +A    +   +L L+
Sbjct: 342 QNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQ 401

Query: 366 GMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  I  
Sbjct: 402 YKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEI-G 460

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L L 
Sbjct: 461 QLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKLDLS 517

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 518 VNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 574



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 189/422 (44%), Gaps = 45/422 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L+ N +  L +++  L  L  L++ +N+ + LP  IG+L  L++L++  N +  
Sbjct: 205 NLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 264

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L +    +N+L  LP  +G+  NL    +  N +T+LP+++     +  L
Sbjct: 265 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 324

Query: 166 DVEGNKLTVLSNNLIASWTMLTE---------LIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           ++  N+LTVL    I     L +         L   K +    P++   L  +    +++
Sbjct: 325 NLVNNRLTVLPKE-IGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYR 383

Query: 217 NRILS--------------------IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           N  L+                     P  I    +L E Y+ +   S LP E+ +L  L 
Sbjct: 384 NLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLK 443

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L  N LK+   E  QLR L  L+L  N L  LP EIG++  L++L L  N L+    
Sbjct: 444 YLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIF-- 501

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  PA ++ L+     +      TT    I     L      L+L+   L+ +P+E
Sbjct: 502 -------PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT----LNLQRNQLTNLPAE 550

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   + +LDL+ N    LP E+     LQTL L  N++   P  I   L +L  L L 
Sbjct: 551 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI-GQLQNLQWLYLQ 609

Query: 436 NN 437
           NN
Sbjct: 610 NN 611



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 228 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 288 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 347

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 348 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 407

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 408 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 467

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 468 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 527

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 528 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 574

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 575 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 629



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 113/254 (44%), Gaps = 14/254 (5%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 369 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 423

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 424 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 480

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T      I     L  L  
Sbjct: 481 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE-IGKLENLQTLNL 539

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P  I  L  L  LDL+ N+   +P  I     L    + NN L+ LP E+G+
Sbjct: 540 QRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQ 599

Query: 252 LSKLGTLDLHSNQL 265
           L  L  L L +NQ 
Sbjct: 600 LQNLQWLYLQNNQF 613


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 269/563 (47%), Gaps = 58/563 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYK-------------NFDEAGEGDKWWEAVDLQKLI 51
           +K A  SG LNLS + L  VP +V+              + D + E + WW    L  L 
Sbjct: 36  IKQALKSGVLNLSGQGLATVPEKVWNLSDSEDCDKEVRYDLDRSNEEESWWNQKTLTNLD 95

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  +++S N + ++P+   
Sbjct: 96  LSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKLTELPESFF 155

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L   + + N   E+ S++   + L     S N + SLP  +    ++ +L +  N+
Sbjct: 156 ELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNR 215

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L N+ I +   L ++  +KN L  +P  +G L +L  L +  N ++ +P   +GC +
Sbjct: 216 LIELPND-IVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELPD-FTGCDA 273

Query: 232 LAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           L E ++ NN + ++PA+  + L +L  LDL  N++++   E   L  L+ LDLSNNS+S 
Sbjct: 274 LKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISS 333

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR------LPENEDSE-AS 342
           LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R       PEN  +    
Sbjct: 334 LPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFEE 393

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSS 401
           +T  D+  M        + + +   NL  +P +++ +A E                    
Sbjct: 394 STFPDVYQMKK-----GRSMIVSNKNLIDVPEQVFLDAAE-------------------- 428

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            AS+  + +S+NK+ + P  I      L+ L +  N L+ +P   F     +  L++S N
Sbjct: 429 -ASVYNVDISKNKLGEVPSGITHLADQLTELNISFNLLKTIPM-FFSRFERISYLNISNN 486

Query: 462 I-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI---PEGF 517
           + A LPE      L  L+EL +   QL+  P  +  L+ L IL    N ++ I     G 
Sbjct: 487 LLADLPE--VVGLLVTLRELNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESGL 544

Query: 518 KNLTSLTELDLSDNNISALPPEL 540
             L  L  LDL++NNI  +PP L
Sbjct: 545 AALPRLATLDLANNNIKQVPPVL 567



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +++SN  ++ +P +  +N  +            L+ L L  N IEKL +++  L  LT L
Sbjct: 277 IHISNNFIKSIPADFCENLPQ------------LKVLDLRDNKIEKLPDEISMLASLTRL 324

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKFDCSSNQLKELP 130
           ++S+N +S LP+ +  L  L SL V  N I  I  +I   G+   L          K  P
Sbjct: 325 DLSNNSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGP 384

Query: 131 SSLGRCLNLSDFK------------ASNNCITSLPE----DLADCSKMSKLDVEGNKLTV 174
            ++      S F              SN  +  +PE    D A+ S +  +D+  NKL  
Sbjct: 385 ENVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEAS-VYNVDISKNKLGE 443

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           + + +      LTEL  S NLL  +P       R+  L++  N +  +P  +    +L E
Sbjct: 444 VPSGITHLADQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRE 503

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGL 290
             + NN L  +P  + +L  L  L    N+++E       L    RL+ LDL+NN++  +
Sbjct: 504 LNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESGLAALPRLATLDLANNNIKQV 563

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           PP +G +  +  L L GN  R  R  ++   T +++ YLR R+P
Sbjct: 564 PPVLGLLKNITTLELIGNGFRQPRHQILEKGTESIMAYLRDRIP 607



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 63/334 (18%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N +  I  ++     L    + +NAL++LP  +G L+KL  +++  N+L E 
Sbjct: 91  LTNLDLSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKLTEL 150

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                +L+ L VL+L++N  S +   +  +  L  L ++ N L +L         P  + 
Sbjct: 151 PESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSL---------PGGIG 201

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           +L                           V  ++L+L    L  +P++I     + K+DL
Sbjct: 202 FL---------------------------VRLQQLTLNNNRLIELPNDIVNLRNLHKMDL 234

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           ++N +++LPP +     L+ L +  N + + PD   T   +L  + + NN ++ +P+D  
Sbjct: 235 AKNDLKQLPPVMGELRKLECLYVQHNDVVELPD--FTGCDALKEIHISNNFIKSIPADFC 292

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +++P L++LDL  N                        ++ + P +I  L  L  LDLS 
Sbjct: 293 ENLPQLKVLDLRDN------------------------KIEKLPDEISMLASLTRLDLSN 328

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           NS+ S+P     L  L  L +  N I ++  +++
Sbjct: 329 NSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDII 362



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIW------EAGEITKLDLSRNSIQELPPELSSCAS 404
           +  + ++ S  L+L G  L+ +P ++W      +  +  + DL R++ +E      +  +
Sbjct: 34  IKIKQALKSGVLNLSGQGLATVPEKVWNLSDSEDCDKEVRYDLDRSNEEE---SWWNQKT 90

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L LS N +    + +  +L  L+ L L +N L  +P DG   +  L  +++S N + 
Sbjct: 91  LTNLDLSSNALTCISENV-KNLGDLTVLNLQDNALTSLP-DGIGCLTKLTKINISRNKLT 148

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LPE+  F  L  L+ L L      E  +++  L  L +LD+S NSL S+P G   L  L
Sbjct: 149 ELPES--FFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRL 206

Query: 524 TELDLSDNNISALPPELVSV 543
            +L L++N +  LP ++V++
Sbjct: 207 QQLTLNNNRLIELPNDIVNL 226


>gi|348686390|gb|EGZ26205.1| hypothetical protein PHYSODRAFT_312299 [Phytophthora sojae]
          Length = 759

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 171/580 (29%), Positives = 271/580 (46%), Gaps = 48/580 (8%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R L+ AR +G L+L  R+L + P +VY   +   + +K WE VDL K+ L+HN I  + +
Sbjct: 27  RALREARRTGVLSLPARNLTEFPAKVYHLEEHLEKDEKKWECVDLVKIDLSHNAIPSISD 86

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           ++  L  +T + ++ N L  LP    EL  L  LD+S N + + + +  G+   L +   
Sbjct: 87  EIAGLTSVTSIKLTQNALQVLPEGFFELQALTYLDLSHNQLEQDLSESFGALVGLKELVL 146

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  LP S+    NL      +N +T+LPE +    K+  L    N+LT L  +  A
Sbjct: 147 SGNKLSRLPDSIALLENLETLHVDDNSLTALPESIGRLHKLHVLMAHTNQLTRLPASFGA 206

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M   L   KN L    + +  LSRL  LDL QN+++  P    G  +L + ++G N 
Sbjct: 207 LQNM-QNLDLKKNRLESTSDALAGLSRLKFLDLRQNKLIVFPELPEG-ATLDQVFLGYNI 264

Query: 242 LSALPAE--LGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           LSA+     L     +  LD+  N+        AC   L  LD++NN LS LPP +G + 
Sbjct: 265 LSAIDETSILRIKDSVTVLDMRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLGYLK 324

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP--------ENEDSEASTTKEDL-- 348
            L   ++ GNPLR +R S+++    +L KYLR+R P        E E  E    +E L  
Sbjct: 325 HLNHFIVDGNPLRAIRRSVISSGCESLKKYLRTRGPPPVGVDVLEEERDELQLERERLAQ 384

Query: 349 ---------------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKLDL 387
                           T   R +  S  +     +L+ +P ++   G+      +  L+L
Sbjct: 385 VDNNKTEELPPPAVEYTAQFREAAASGTMIFTNSSLAVLPPDLVGQGQFNFGSTLIHLNL 444

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S N +Q LP  +     L+TL +  N+++    +I  +L  L  L+L  N L       F
Sbjct: 445 SSNQLQALPASVGELVMLKTLTVEDNQLQSLHPSI-AALPHLELLRLRKNQLLAESISYF 503

Query: 448 -KDIP----MLQILDL-SYNIASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
             D P     L+ +DL S N+++LP E     SL  L   Y R   L   P    +L ++
Sbjct: 504 LGDSPALGNTLKEMDLRSNNLSALPAEISQLRSLETLLLAYNRIETLDRFPWS--QLAKV 561

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++ +S N L+S+   + +   L  L   +NN++ +P EL
Sbjct: 562 SVISVSDNKLRSLGRIY-DAPLLASLSFENNNLAKVPCEL 600



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 24/236 (10%)

Query: 107 PDEIGSA-----TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           PD +G       + L+  + SSNQL+ LP+S+G  + L      +N + SL   +A    
Sbjct: 425 PDLVGQGQFNFGSTLIHLNLSSNQLQALPASVGELVMLKTLTVEDNQLQSLHPSIAALPH 484

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L                L  S +   G    +G+   L  +DL  N + +
Sbjct: 485 LELLRLRKNQL----------------LAESISYFLGDSPALGNT--LKEMDLRSNNLSA 526

Query: 222 IPSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
           +P+ IS   SL    +  N +  L      +L+K+  + +  N+L+          L+ L
Sbjct: 527 LPAEISQLRSLETLLLAYNRIETLDRFPWSQLAKVSVISVSDNKLRSLGRIYDAPLLASL 586

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
              NN+L+ +P E+G    LR + + GNP RT+R +++   +  +L YL+++LP N
Sbjct: 587 SFENNNLAKVPCELGLCPHLRAIYMNGNPQRTVRGAVIAKGSAEILVYLKNKLPPN 642



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 138/338 (40%), Gaps = 67/338 (19%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L+++DL  N I SI   I+G  S+    +  NAL  LP    +L  L  LDL  NQL++ 
Sbjct: 71  LVKIDLSHNAIPSISDEIAGLTSVTSIKLTQNALQVLPEGFFELQALTYLDLSHNQLEQ- 129

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                       DLS +         G +  L++L+L+GN L                  
Sbjct: 130 ------------DLSES--------FGALVGLKELVLSGNKL------------------ 151

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
             SRLP            D I +   L      L ++  +L+A+P  I    ++  L   
Sbjct: 152 --SRLP------------DSIALLENLET----LHVDDNSLTALPESIGRLHKLHVLMAH 193

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP    +  ++Q L L +N+++   DA L  LS L  L L  N L   P     
Sbjct: 194 TNQLTRLPASFGALQNMQNLDLKKNRLESTSDA-LAGLSRLKFLDLRQNKLIVFP----- 247

Query: 449 DIPMLQILD---LSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           ++P    LD   L YNI +++ E         +  L +R  +    P +I  L  L+ LD
Sbjct: 248 ELPEGATLDQVFLGYNILSAIDETSILRIKDSVTVLDMRDNKFAALPANIACLYLLKTLD 307

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           ++ N L  +P G   L  L    +  N + A+   ++S
Sbjct: 308 VANNDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRSVIS 345



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 179/418 (42%), Gaps = 58/418 (13%)

Query: 43  EAVDLQKLILAHNNIEKLKED--LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           E   L ++ L +N +  + E   LR    +TVL++  NK + LPA I  L++LK+LDV+ 
Sbjct: 251 EGATLDQVFLGYNILSAIDETSILRIKDSVTVLDMRDNKFAALPANIACLYLLKTLDVAN 310

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSL--GRCLNLSDFKASNN----CITSLPE 154
           N +  +P  +G    L  F    N L+ +  S+    C +L  +  +       +  L E
Sbjct: 311 NDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRSVISSGCESLKKYLRTRGPPPVGVDVLEE 370

Query: 155 DL------------ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +              D +K  +L     + T       AS TM+     + +L    P+ 
Sbjct: 371 ERDELQLERERLAQVDNNKTEELPPPAVEYTAQFREAAASGTMI---FTNSSLAVLPPDL 427

Query: 203 IGSL-----SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           +G       S LI L+L  N++ ++P+S+     L    + +N L +L   +  L  L  
Sbjct: 428 VGQGQFNFGSTLIHLNLSSNQLQALPASVGELVMLKTLTVEDNQLQSLHPSIAALPHLEL 487

Query: 258 LDLHSNQLKEYCVE-------ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L L  NQL    +        A    L  +DL +N+LS LP EI ++ +L  LLL  N +
Sbjct: 488 LRLRKNQLLAESISYFLGDSPALGNTLKEMDLRSNNLSALPAEISQLRSLETLLLAYNRI 547

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEAS--TTKEDLITMATRLSVTS--KELSLEG 366
            TL                  R P ++ ++ S  +  ++ +    R+        LS E 
Sbjct: 548 ETL-----------------DRFPWSQLAKVSVISVSDNKLRSLGRIYDAPLLASLSFEN 590

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
            NL+ +P E+     +  + ++ N  + +   + +  S + L+  +NK+   P+A+L+
Sbjct: 591 NNLAKVPCELGLCPHLRAIYMNGNPQRTVRGAVIAKGSAEILVYLKNKLP--PNAVLS 646


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 242/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 459

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 460 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 251/545 (46%), Gaps = 48/545 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L    I     L  L    
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKE-IGQLQNLQTLNLQD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  NR+  +P  I    +L       N L+ALP E+G+L 
Sbjct: 219 NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLK 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPP-------EIGKM 297
            L TL+L +N+L     E  QL+ L  L+L  N LS         L P       E+ + 
Sbjct: 279 NLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAED 338

Query: 298 TTLRKL-LLTGNPLRT--LRSSLVNGPT---PALLKYLRSRLPENEDSEASTTKEDLITM 351
              R L L    PL+   LR    N        +LK+   R     D   ST  +++   
Sbjct: 339 GVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEI--- 395

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            +RL    K L+L G+N L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L
Sbjct: 396 -SRLK-NLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSL 452

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            +N +K +P  I   L  L  L L  N     P +  K +  LQ L+L  N + +LP   
Sbjct: 453 HQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENLQTLNLQRNQLTNLP--A 508

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L 
Sbjct: 509 EIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQ 568

Query: 530 DNNIS 534
           +N  S
Sbjct: 569 NNQFS 573



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 273/575 (47%), Gaps = 71/575 (12%)

Query: 2   DRILKAART-----SGSLNLSNRSLRDVPNEVYK------------------NFDEAGEG 38
           D++L  AR      SG LNL+ + L  VP +V+                   + D   E 
Sbjct: 28  DKVLSKARIKQALKSGVLNLAGQGLATVPEKVWNLSDSEDCDKDAAAAAVRYDLDRTNEE 87

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D WW    L  L L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  L +
Sbjct: 88  DSWWNQKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSL 147

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P+   +   L   + S N   E+ +++   + L     S N + SLP  +  
Sbjct: 148 GRNKLSELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGF 207

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++ +L +  N+LT L N+ I +   L +L  +KN L  +P  +G L +L  L +  N 
Sbjct: 208 LVRLQQLTLNNNRLTELPND-IVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHND 266

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-R 276
           +  +P   +GC +L E ++ NN + ++PA+  + L +L  LDL  N++++   E   L  
Sbjct: 267 VGELP-DFTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLAS 325

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ LDLSNNS+S LP  +  +  L  L + GNP+R++R  ++   T  +LK L+ R    
Sbjct: 326 LTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGPG 385

Query: 337 EDSEA------STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGE--ITKLDL 387
           + SE        +T  D+  M        + + +   NL  IP +++ +A E  +  +D+
Sbjct: 386 KSSEKVRVPFEESTFPDVYQMK-----KGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDI 440

Query: 388 SRNSIQELPPELSSCASLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           S+N + E+P  L+  AS+ T L +S N +K  P    +    +S L + NN L  +P   
Sbjct: 441 SKNKLMEIPAGLTHLASIMTELNVSFNALKTIP-MFFSQFERISYLNVSNNQLTDLP--- 496

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                  +++ L               L  L+EL +   QL++ P  +  L+ L IL   
Sbjct: 497 -------EVVGL---------------LVTLRELNVANNQLKQIPPCVYELKGLEILLAR 534

Query: 507 QNSLQSI---PEGFKNLTSLTELDLSDNNISALPP 538
            N ++ +     G   L  L  LD+++NNI  +PP
Sbjct: 535 GNKIEELDASEHGLGALPRLATLDVANNNIKQVPP 569



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 45/353 (12%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAA 86
           +Y   ++ GE   +     L++L +++N I+ +  D   NLP L +L++  NK+ +LP  
Sbjct: 260 LYVQHNDVGELPDFTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDE 319

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK--- 143
           I  L  L  LD+S NSI  +P  + +   LV      N ++ +   + +C      K   
Sbjct: 320 ISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLK 379

Query: 144 ----------------------------------ASNNCITSLPEDL---ADCSKMSKLD 166
                                              SN  +  +PE +   A  + +  +D
Sbjct: 380 DRDGPGKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNID 439

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  +   L    +++TEL  S N L  +P       R+  L++  N++  +P  +
Sbjct: 440 ISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQLTDLPEVV 499

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDL 282
               +L E  + NN L  +P  + +L  L  L    N+++E       L    RL+ LD+
Sbjct: 500 GLLVTLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGALPRLATLDV 559

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +NN++  +PP +G +  +  L + GN  R  R  ++   T +++ YLR R+P+
Sbjct: 560 ANNNIKQVPPILGMLKNITTLEIIGNAFRQPRHQILEKGTESIMAYLRDRIPQ 612



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 138/304 (45%), Gaps = 49/304 (16%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TLDL SN L         L  L+VL+L +N+L+ LP  IG +T L KL L  N L  L
Sbjct: 96  LTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKLSEL 155

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITM---------------ATRLSV 357
             S  N      L+ L+S  L  N+ +E      DLI +                    V
Sbjct: 156 PESFFN------LRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGFLV 209

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             ++L+L    L+ +P++I     + KLDL++N ++ LPP +     L+ L +  N + +
Sbjct: 210 RLQQLTLNNNRLTELPNDIVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHNDVGE 269

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            PD   T   +L  L + NN ++ +P+D  +++P L+ILDL  N                
Sbjct: 270 LPD--FTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDN---------------- 311

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
                   ++ + P +I  L  L  LDLS NS+ S+P     L  L  L +  N I ++ 
Sbjct: 312 --------KIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIR 363

Query: 538 PELV 541
            +++
Sbjct: 364 RDII 367



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 184/451 (40%), Gaps = 110/451 (24%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L ++PN++                 +L KL LA N+++ L   +  L  L  L
Sbjct: 214 LTLNNNRLTELPNDIVN-------------LRNLHKLDLAKNDLKLLPPVMGELRKLECL 260

Query: 74  NVSHNKLSELPAAIG-----ELHM------------------LKSLDVSFNSIMKIPDEI 110
            V HN + ELP   G     ELH+                  LK LD+  N I K+PDEI
Sbjct: 261 YVQHNDVGELPDFTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEI 320

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--- 167
               +L + D S+N +  LPS L    +L   +   N I S+  D+  C     L     
Sbjct: 321 SMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKD 380

Query: 168 --------EGNKLTVLSNNLIASWTM---LTELIASKNLLNGMPETI---GSLSRLIRLD 213
                   E  ++    +     + M    + ++++KNL++ +PE +      + +  +D
Sbjct: 381 RDGPGKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLID-IPEQVFLDAMEASVYNID 439

Query: 214 LHQNRILSIPSSISGCCS-LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           + +N+++ IP+ ++   S + E  +  NAL  +P    +                     
Sbjct: 440 ISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFE------------------- 480

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
              R+S L++SNN L+ LP  +G + TLR+L +  N L+ +       P    LK L   
Sbjct: 481 ---RISYLNVSNNQLTDLPEVVGLLVTLRELNVANNQLKQI------PPCVYELKGL--- 528

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                        E L+    ++    +EL      L A+P        +  LD++ N+I
Sbjct: 529 -------------EILLARGNKI----EELDASEHGLGALP-------RLATLDVANNNI 564

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           +++PP L    ++ TL +  N  +     IL
Sbjct: 565 KQVPPILGMLKNITTLEIIGNAFRQPRHQIL 595



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 25/235 (10%)

Query: 327 KYLRSRLPENEDSEA----STTKEDLITMATRL--SVTSKELSLEGMNLSAIPSEIWEAG 380
           + +RSR+ + E +      +  ++D +    R+  ++ S  L+L G  L+ +P ++W   
Sbjct: 4   RAVRSRIRQQELNPVFHWQNKEEDDKVLSKARIKQALKSGVLNLAGQGLATVPEKVWNLS 63

Query: 381 E-----------ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           +             + DL R + ++      +  SL TL LS N +    + +  +L  L
Sbjct: 64  DSEDCDKDAAAAAVRYDLDRTNEED---SWWNQKSLTTLDLSSNTLTSISENV-KNLGDL 119

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
           + L L +N L  +P +G   +  L  L L  N ++ LPE+  F +L  L+ L L      
Sbjct: 120 TVLNLQDNALTALP-EGIGCLTKLTKLSLGRNKLSELPES--FFNLRELKSLNLSHNDFA 176

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           E   ++  L  L +LD+S NSL S+P G   L  L +L L++N ++ LP ++V++
Sbjct: 177 EIHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLTELPNDIVNL 231


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 242/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L  +  E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 459

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 460 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 170/545 (31%), Positives = 250/545 (45%), Gaps = 48/545 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L    I     L  L    
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKE-IGQLQNLQTLNLQD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  NR+  +P  I    +L       N L+A P E+G+L 
Sbjct: 219 NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLK 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPP-------EIGKM 297
            L TL+L +N+L     E  QL+ L  L+L  N LS         L P       E+ + 
Sbjct: 279 NLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAED 338

Query: 298 TTLRKL-LLTGNPLRT--LRSSLVNGPT---PALLKYLRSRLPENEDSEASTTKEDLITM 351
              R L L    PL+   LR    N        +LK+   R     D   ST  +++   
Sbjct: 339 GVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEI--- 395

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            +RL    K L+L G+N L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L
Sbjct: 396 -SRLK-NLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSL 452

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            +N +K +P  I   L  L  L L  N     P +  K +  LQ L+L  N + +LP   
Sbjct: 453 HQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENLQTLNLQRNQLTNLP--A 508

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L 
Sbjct: 509 EIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQ 568

Query: 530 DNNIS 534
           +N  S
Sbjct: 569 NNQFS 573



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 172/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L   P  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 242/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 459

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 460 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 251/545 (46%), Gaps = 48/545 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L    I     L  L    
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKE-IGQLQNLQTLNLQD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  NR+  +P  I    +L       N L+ALP E+G+L 
Sbjct: 219 NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLK 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPP-------EIGKM 297
            L TL+L +N+L     E  QL+ L  L+L  N LS         L P       E+ + 
Sbjct: 279 NLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAED 338

Query: 298 TTLRKL-LLTGNPLRT--LRSSLVNGPT---PALLKYLRSRLPENEDSEASTTKEDLITM 351
              R L L    PL+   LR    N        +LK+   R     D   ST  +++   
Sbjct: 339 GVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEI--- 395

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            +RL    K L+L G+N L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L
Sbjct: 396 -SRLK-NLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSL 452

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            +N +K +P  I   L  L  L L  N     P +  K +  LQ L+L  N + +LP   
Sbjct: 453 HQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENLQTLNLQRNQLTNLP--A 508

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L 
Sbjct: 509 EIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQ 568

Query: 530 DNNIS 534
           +N  S
Sbjct: 569 NNQFS 573



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|325190106|emb|CCA24588.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 780

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 174/578 (30%), Positives = 266/578 (46%), Gaps = 86/578 (14%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + R L+ AR SG L L  R L  +P +VY   D   + +K WE +DL K+ ++HN I  +
Sbjct: 33  LSRSLREARHSGFLRLPARQLESLPKQVYSLADFLEKDEKPWECIDLFKIDVSHNKITAI 92

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKF 119
           K+++ N+  L+   +S N L  LP    +L  L  LD+S N      P E+G    L   
Sbjct: 93  KDEIGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNCFPAEVGKLRNLRDL 152

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S N L  LP S+G    L      NN +++LPE +  C+++  L V+ N+L+ L  +L
Sbjct: 153 NLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCTRLHALSVQSNQLSCLPKSL 212

Query: 180 IASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILS---IPSSISGCCSLAEF 235
               + LT L   KN L  +  +   +  RLI LDL QNR++    +PS+ +    L   
Sbjct: 213 -RDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMPYLPSTKNSNQVLDRV 271

Query: 236 YMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           ++G N L+ +P +       +  LDL  NQL+        L +L  LDLSNN+L+ LP  
Sbjct: 272 FLGYNRLTEIPESTFVTRDSITLLDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHS 331

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR------LPE------------ 335
           +G +  L +L L GNP+R +R +++      L K+LR+R      +PE            
Sbjct: 332 LGYIKQLTRLHLDGNPMRAIRRAVIVAGCQTLKKHLRTREGPPPQVPEEYLECEEFDDNW 391

Query: 336 -----NEDS--EASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                N+DS  + STT+  D      R S  + ++ L   NL+  P E            
Sbjct: 392 HCVKDNKDSIGDTSTTELADETHYLYRESACTFKMDLRDKNLTRFPLE------------ 439

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
                 E     + C++LQTL LS N++    D+I   L +L  L ++ N L+++     
Sbjct: 440 -----HEWSTFTTFCSTLQTLNLSNNQLTTL-DSIFGELKALVTLIVEENVLQEI----- 488

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQ------- 499
                               +P   SLP L+ L LR+ QL   A   +LR ++       
Sbjct: 489 --------------------HPFVVSLPRLKNLLLRKNQLTSTALQKLLRNKENGSIVSP 528

Query: 500 LRILDLSQNSLQSIPEGFKNL-TSLTELDLSDNNISAL 536
           L  +D+S N L   P GF     SL  L LS N++  L
Sbjct: 529 LEEIDVSNNMLDRFPYGFGAFGISLETLILSYNHLQTL 566



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 188/456 (41%), Gaps = 67/456 (14%)

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L K D S N++  +   +G  + LS FK S N +  LP+     +++  LD+  N+ +  
Sbjct: 79  LFKIDVSHNKITAIKDEIGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNC 138

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               +     L +L  S N L  +PE+IG+LS L  L +  NR+ ++P ++  C  L   
Sbjct: 139 FPAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCTRLHAL 198

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPE 293
            + +N LS LP  L  LS L +L L  NQL     +A     RL VLDL  N L  +P  
Sbjct: 199 SVQSNQLSCLPKSLRDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMP-- 256

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMA 352
                    L  T N  + L            L Y R + +PE+             T  
Sbjct: 257 --------YLPSTKNSNQVLDR--------VFLGYNRLTEIPES-------------TFV 287

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           TR S+T   L L    L A+P+ I    ++  LDLS N++ +LP  L     L  L L  
Sbjct: 288 TRDSITL--LDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHSLGYIKQLTRLHLDG 345

Query: 413 NKIKDWPDAILTSLSSL--SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 470
           N ++    A++ +        L+    P  QVP +       L+  +   N   + +N  
Sbjct: 346 NPMRAIRRAVIVAGCQTLKKHLRTREGPPPQVPEE------YLECEEFDDNWHCVKDNKD 399

Query: 471 FSSLPHLQEL-----YLRR-------MQLREAPTDILRLQQ-----------LRILDLSQ 507
                   EL     YL R       M LR+       L+            L+ L+LS 
Sbjct: 400 SIGDTSTTELADETHYLYRESACTFKMDLRDKNLTRFPLEHEWSTFTTFCSTLQTLNLSN 459

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N L ++   F  L +L  L + +N +  + P +VS+
Sbjct: 460 NQLTTLDSIFGELKALVTLIVEENVLQEIHPFVVSL 495



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           CS +  L++  N+LT L +++      L  LI  +N+L  +   + SL RL  L L +N+
Sbjct: 449 CSTLQTLNLSNNQLTTL-DSIFGELKALVTLIVEENVLQEIHPFVVSLPRLKNLLLRKNQ 507

Query: 219 ILSIP--------SSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYC 269
           + S           + S    L E  + NN L   P   G     L TL L  N L+   
Sbjct: 508 LTSTALQKLLRNKENGSIVSPLEEIDVSNNMLDRFPYGFGAFGISLETLILSYNHLQ--T 565

Query: 270 VEACQL--------RLSVLDLS----------------------NNSLSGLPPEIGKMTT 299
           +  C L        RL VL L+                      NN+++ +P E+G    
Sbjct: 566 LADCPLEFSWAMLPRLGVLSLTDNKLNDLGKVFELPGLASFSFENNNVTHVPCELGLCPH 625

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           L  L L GNP +T+RS ++   + A+L++LR++LP+    E S  K  L T
Sbjct: 626 LHALYLNGNPQKTIRSGIIAKGSHAVLEHLRNKLPQ----EPSRGKRSLAT 672


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 234/496 (47%), Gaps = 77/496 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+ K               +LQKL L+HN +  L +++  L  L  L
Sbjct: 40  LDLSSNQLMTLPKEIGK-------------LQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 86

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ N+L+ L   IG L  L++LD+  N +  +P+EI +   L   D   NQL  LP  +
Sbjct: 87  NLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI 146

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL       N +T+LPE++ +   +  LD+EGN+L  L                  
Sbjct: 147 WNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATL------------------ 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 PE IG+L  L  LDL  N++ ++P  I    +L + Y+ NN L+ LP E+GKL 
Sbjct: 189 ------PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQ 242

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L++N+L     E   L+ L +L L +N L+ LP E+GK+  L++L L  N L T
Sbjct: 243 NLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTT 302

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   + N      L+ L+                              +L+L     + +
Sbjct: 303 LPKEIGN------LQNLQ------------------------------DLNLNSNQFTTL 326

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EIW   ++ KL L RN +  LP E+ +  +L+TL L  N++   P+ I  +L +L  L
Sbjct: 327 PKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEI-GNLQNLQKL 385

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L+ N L  +P +  K   + ++   +  + +LP      +L  LQ L L   QL   P 
Sbjct: 386 DLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLP--IEIGNLQKLQTLSLGHNQLTTLPK 443

Query: 493 DILRLQQLRILDLSQN 508
           +I  LQ+L++LDL  N
Sbjct: 444 EIGNLQKLKMLDLGGN 459



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 204/437 (46%), Gaps = 66/437 (15%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D SSNQL  LP  +G+  NL     S+N +T+LP+++     + KL
Sbjct: 27  LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 86

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS                        + IG+L  L  LDL +N++ ++P  
Sbjct: 87  NLNSNQLTTLS------------------------KEIGNLQNLQTLDLGRNQLTTLPEE 122

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +G N L+ LP E+  L  L TLDL  NQL     E   L+ L  LDL  
Sbjct: 123 IWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEG 182

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG +  L+ L L GN L TL         P  +  L++             
Sbjct: 183 NQLATLPEEIGNLQNLQTLDLEGNQLTTL---------PKEIGKLQNL------------ 221

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          K+L L    L+ +P E+ +   + +L L  N +  LP E+    +
Sbjct: 222 ---------------KKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQN 266

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L L  N++   P  +   L +L  L L NN L  +P +   ++  LQ L+L+ N   
Sbjct: 267 LKILSLGSNQLTTLPKEV-GKLQNLQELYLYNNRLTTLPKE-IGNLQNLQDLNLNSNQFT 324

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +LP+     +L  LQ+L L R QL   P +I  LQ L+ LDL  N L ++PE   NL +L
Sbjct: 325 TLPK--EIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNL 382

Query: 524 TELDLSDNNISALPPEL 540
            +LDL  N ++ LP E+
Sbjct: 383 QKLDLEGNQLTTLPKEI 399


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 236/513 (46%), Gaps = 58/513 (11%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL     S N +T+LP+++     +  LD++ N+
Sbjct: 115 RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            T+L                        P+ IG L  L  L+L  N++ ++P  I    +
Sbjct: 175 FTIL------------------------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L NN L+ L
Sbjct: 211 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK----- 345
           P EIG++  L+ L L  NPL       +    P       S L   E +E    +     
Sbjct: 271 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGVYRNLNLA 324

Query: 346 --EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
             E L     RL   +               +EL L     S +P EI     +  L L 
Sbjct: 325 QEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG 384

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++  +
Sbjct: 385 LNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKIFPAE-IE 442

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ LDL+ 
Sbjct: 443 QLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLND 500

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 501 NQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 533



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 234/545 (42%), Gaps = 71/545 (13%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           L+LS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL+  P  IG+L  L+ L +S N +  +P EIG    L   D  +
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ   LP  +G+  NL      +N + +LP ++     + +L +  N+LTVL    I   
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L + +N L  +P+ +G L  L  L+L  NR+  +P  I    +L +  +  N LS
Sbjct: 232 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 291

Query: 244 ALPAELGKLSKL---GTLDLHS----------NQLKEYCVEACQLRLSVLDLSNNSLSGL 290
               E  ++ KL     LDL            N  +E  ++   LRL   + S       
Sbjct: 292 L--KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFS----QLF 345

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  I K   LR+L L      TL   +             SRL            ++L  
Sbjct: 346 PKVILKFRNLRELYLYDCGFSTLPKEI-------------SRL------------KNLKY 380

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +A         L L G  L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L
Sbjct: 381 LA---------LGLNG--LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSL 429

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            +N +K +P  I   L  L  L L  N     P +  K +  LQ L+L  N + +L    
Sbjct: 430 HQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENLQTLNLQRNQLTNL--TA 485

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L 
Sbjct: 486 EIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQ 545

Query: 530 DNNIS 534
           +N +S
Sbjct: 546 NNQLS 550



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 193/432 (44%), Gaps = 71/432 (16%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++ + P  I    +L + ++  N L+ALP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L TLDL +NQ      E  QL+ L  L+L +N L+ LP EIG++  L++L L 
Sbjct: 158 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L  L   +        L+ L++   PEN                             
Sbjct: 218 NNRLTVLPKEI------GQLQNLQTLCSPENR---------------------------- 243

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL--------SRNKIKD 417
              L+A+P E+ +   +  L+L  N +  LP E+    +LQ L L         R +I+ 
Sbjct: 244 ---LTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 300

Query: 418 -WPDAILTSLSSLSCLKLDNNPLRQVPSDG-FKDIPM-----LQILDLSYNIASLPENPP 470
            +PD+              N  LR+V  DG ++++ +     L++ DL     +  +  P
Sbjct: 301 LFPDS--------------NLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFP 346

Query: 471 --FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                  +L+ELYL        P +I RL+ L+ L L  N L++IP     L +L  L+L
Sbjct: 347 KVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNL 406

Query: 529 SDNNISALPPEL 540
             N +  LP E+
Sbjct: 407 EANELERLPKEI 418



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 174/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 164 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 224 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 284 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 343

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 344 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 403

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 404 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 463

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 464 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 510

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 511 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 565



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 10/165 (6%)

Query: 20  SLRDVPNEV--YKNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
            L+++P+E+   KN +    EA E ++  + +    +LQ+L L  N ++    ++  L  
Sbjct: 387 GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKK 446

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N+ +  P  IG+L  L++L++  N +  +  EIG    L + D + NQ   L
Sbjct: 447 LQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVL 506

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L      NN +T+LP ++     +  L ++ N+L++
Sbjct: 507 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSL 551


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 256/537 (47%), Gaps = 30/537 (5%)

Query: 13  SLNLSNRSLRDVPNEV-----YKNFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKE 62
           SL +S  +L  +PN +      +  D +  G     D   E  +LQ L ++  ++  L  
Sbjct: 109 SLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPA 168

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L  L+VS   L+ LP +IG+L MLK LDVS   +  +PD IG  T L   D S
Sbjct: 169 SIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVS 228

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           S  L  LP S+G+  +L     S   + +LP+ +   S +  LDV G +L +L ++ I  
Sbjct: 229 STSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDS-IVQ 287

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L  L  S   +N +P++IG LS L  LD+    + ++P SI    +L    + + +L
Sbjct: 288 LSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASL 347

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP  + +LS L  L+L    L       CQL  L  L+LS   L+ LP  I ++ +L+
Sbjct: 348 NTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQ 407

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L+G  L TL         P  +  L S    N      TT  + I     L    ++
Sbjct: 408 DLNLSGTGLTTL---------PEAICQLNSLQDLNLSGTGLTTLPEAICQLNSL----QD 454

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+L G  L+ +P  I +   +  L+LS   +  LP  +    +L  L+ S   +   PD 
Sbjct: 455 LNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNNLMASNTALTTLPDT 514

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQEL 480
            L  LS+L  L + N  L  +P D    +  LQIL +S  ++ +LPE+     L  L+ L
Sbjct: 515 -LGQLSNLEFLNISNTSLVTLP-DSIGLLSHLQILFVSDTDLVTLPES--IGQLTSLEIL 570

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +    L   P  I RL  L+IL++S   L S+PE    L SL +L++S+  +++LP
Sbjct: 571 NVSNTGLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLP 627



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 254/534 (47%), Gaps = 41/534 (7%)

Query: 40  KWWEAV-DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           KW E +  L+ L ++  +++KL E +  L  L  L VS   L+ LP +I +L  L+ LD+
Sbjct: 76  KWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDI 135

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           SF+  + +PD IG    L   + SS  L  LP+S+G+   L     S+  +TSLP+ +  
Sbjct: 136 SFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQ 195

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            S +  LDV G  L  L ++ I   T L  L  S   LN +P++IG LS L  LD+    
Sbjct: 196 LSMLKHLDVSGTDLATLPDS-IGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTS 254

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + ++P SI    SL    +    L  LP  + +LS L  LD+    +        QL  L
Sbjct: 255 LQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNL 314

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL----------VNGPTPALLK 327
             LD+S+ SL+ LP  IG+++ L+ L ++   L TL  ++          ++G     L 
Sbjct: 315 QHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLP 374

Query: 328 YLRSRLPENEDSEASTTK--------------EDLITMATRLSV---------TSKELSL 364
               +L   +D   S T               +DL    T L+          + ++L+L
Sbjct: 375 EALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNL 434

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
            G  L+ +P  I +   +  L+LS   +  LP  +    SLQ L LS   +   P+ I  
Sbjct: 435 SGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETI-G 493

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLR 483
            L++L+ L   N  L  +P D    +  L+ L++S  ++ +LP++     L HLQ L++ 
Sbjct: 494 QLTNLNNLMASNTALTTLP-DTLGQLSNLEFLNISNTSLVTLPDS--IGLLSHLQILFVS 550

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
              L   P  I +L  L IL++S   L S+PE    LT+L  L++S+ ++++LP
Sbjct: 551 DTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDLTSLP 604



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 235/513 (45%), Gaps = 19/513 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKE--DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           W+ + +Q  ++     +K++E   L      + L++S  +LS LP  +  L  LKSL ++
Sbjct: 8   WDFIKIQDDVIKLTVGKKIREFLTLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIA 67

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P  +   T L   + S   LK+LP  +G  + L     S   +T+LP  +   
Sbjct: 68  SNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQL 127

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S + +LD+  +    L ++ I     L +L  S   L  +P +IG L+RL  LD+    +
Sbjct: 128 SNLRRLDISFSGFINLPDS-IGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGL 186

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            S+P SI     L    +    L+ LP  +G+L+ L  LD+ S  L        QL  L 
Sbjct: 187 TSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQ 246

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            LD+S  SL  LP  IG++++L+ L ++G  L+ L  S+V   +   L    + +    D
Sbjct: 247 HLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPD 306

Query: 339 S--------EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           S            +   L T+   +   S  + L +   +L+ +P  IW    +  L+LS
Sbjct: 307 SIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLS 366

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
              +  LP  L   +SLQ L LS   +   P+AI   L+SL  L L    L  +P +   
Sbjct: 367 GTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAI-CQLNSLQDLNLSGTGLTTLP-EAIC 424

Query: 449 DIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  LQ L+LS   + +LPE      L  LQ+L L    L   P  I +L  L+ L+LS 
Sbjct: 425 QLNSLQDLNLSGTGLTTLPE--AICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSG 482

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L ++PE    LT+L  L  S+  ++ LP  L
Sbjct: 483 TGLTTLPETIGQLTNLNNLMASNTALTTLPDTL 515



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 18/281 (6%)

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +++E+   A Q + S LDLS   LS LP ++  +T L+ L +  NP+  L         P
Sbjct: 25  KIREFLTLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIASNPITIL---------P 75

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
             L+ L      N    + T+ + L      L V  + L +    L+ +P+ I +   + 
Sbjct: 76  KWLECLTGLETLNI---SGTSLKKLPEFIGEL-VGLQSLYVSRTALTTLPNSIRQLSNLR 131

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +LD+S +    LP  +    +LQ L +S   +   P +I   L+ L  L + +  L  +P
Sbjct: 132 RLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASI-GQLTRLQHLDVSSTGLTSLP 190

Query: 444 SDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            D    + ML+ LD+S  ++A+LP++     L +L+ L +    L   P  I +L  L+ 
Sbjct: 191 -DSIGQLSMLKHLDVSGTDLATLPDS--IGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQH 247

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           LD+S  SLQ++P+    L+SL  LD+S   +  LP  +V +
Sbjct: 248 LDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQL 288



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L +++ ++  L + +  L  L +L VS   L  LP +IG+L  L+ L+VS   +  
Sbjct: 520 NLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLVTLPESIGQLTSLEILNVSNTGLTS 579

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ IG  T L   + S+  L  LP S+G+  +L     SN  +TSLP  +     + +L
Sbjct: 580 LPESIGRLTNLQILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSIRQLLLLRQL 639

Query: 166 DVEGNKLTV 174
            V   KL +
Sbjct: 640 TVTATKLPI 648



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 13/120 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+SN SL  +P+ +                  LQ L ++  ++  L E +  L  L +L
Sbjct: 524 LNISNTSLVTLPDSI-------------GLLSHLQILFVSDTDLVTLPESIGQLTSLEIL 570

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           NVS+  L+ LP +IG L  L+ L+VS   +  +P+ IG   +L+K + S+  L  LP S+
Sbjct: 571 NVSNTGLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSI 630


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 241/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 459

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 460 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 168/562 (29%), Positives = 248/562 (44%), Gaps = 82/562 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTIL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+ LP E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR- 311
            L  L    N+L     E  QL+ L  L+L NN L+ LP EIG++  L+ L L  NPL  
Sbjct: 256 NLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSL 315

Query: 312 ---------------TLRSSLVNGPTPAL-------LKYLRSRLPENEDSE-------AS 342
                           LR    +G    L       LK    RL     S+         
Sbjct: 316 KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKF 375

Query: 343 TTKEDLITMATRLSVTSKELS--------LEGMN-LSAIPSEIWEAGEITKLDLSRNSIQ 393
               +L       S   KE+S          G+N L  IPSEI +   +  L+L  N ++
Sbjct: 376 RNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELE 435

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP E+    +LQ L L +N +K +P  I   L  L  L L  N     P +  K +  L
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENL 493

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           Q L+L  N + +LP       L +LQEL L   Q    P +I +L++L+ LDL  N L +
Sbjct: 494 QTLNLQRNQLTNLP--AEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 513 IPEGFKNLTSLTELDLSDNNIS 534
           +P     L +L  L L +N  S
Sbjct: 552 LPTEIGQLQNLQWLYLQNNQFS 573



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 241/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 162

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 163 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 221

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 222 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 281

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 282 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 335

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 336 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 395

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 396 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 454

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 455 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 511

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 512 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 551



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 168/562 (29%), Positives = 248/562 (44%), Gaps = 82/562 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 48  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 95  DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 154

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L                  
Sbjct: 155 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTIL------------------ 196

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+ LP E+G+L 
Sbjct: 197 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 250

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR- 311
            L  L    N+L     E  QL+ L  L+L NN L+ LP EIG++  L+ L L  NPL  
Sbjct: 251 NLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSL 310

Query: 312 ---------------TLRSSLVNGPTPAL-------LKYLRSRLPENEDSE-------AS 342
                           LR    +G    L       LK    RL     S+         
Sbjct: 311 KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKF 370

Query: 343 TTKEDLITMATRLSVTSKELS--------LEGMN-LSAIPSEIWEAGEITKLDLSRNSIQ 393
               +L       S   KE+S          G+N L  IPSEI +   +  L+L  N ++
Sbjct: 371 RNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELE 430

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP E+    +LQ L L +N +K +P  I   L  L  L L  N     P +  K +  L
Sbjct: 431 RLPKEIGQLRNLQRLSLHQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENL 488

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           Q L+L  N + +LP       L +LQEL L   Q    P +I +L++L+ LDL  N L +
Sbjct: 489 QTLNLQRNQLTNLP--AEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 546

Query: 513 IPEGFKNLTSLTELDLSDNNIS 534
           +P     L +L  L L +N  S
Sbjct: 547 LPTEIGQLQNLQWLYLQNNQFS 568



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 182 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 241

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 242 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 301

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 302 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 361

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 362 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 421

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 422 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 481

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 482 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 528

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 529 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 583


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 241/520 (46%), Gaps = 35/520 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+ 
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNTLKI 459

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L
Sbjct: 460 FPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 251/545 (46%), Gaps = 48/545 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L    I     L  L    
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKE-IGQLQNLQTLNLQD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  NR+  +P  I    +L       N L+ALP E+G+L 
Sbjct: 219 NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLK 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPP-------EIGKM 297
            L TL+L +N+L     E  QL+ L  L+L  N LS         L P       E+ + 
Sbjct: 279 NLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAED 338

Query: 298 TTLRKL-LLTGNPLRT--LRSSLVNGPT---PALLKYLRSRLPENEDSEASTTKEDLITM 351
              R L L    PL+   LR    N        +LK+   R     D   ST  +++   
Sbjct: 339 GVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEI--- 395

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            +RL    K L+L G+N L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L
Sbjct: 396 -SRLK-NLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSL 452

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            +N +K +P  I   L  L  L L  N     P +  K +  LQ L+L  N + +LP   
Sbjct: 453 HQNTLKIFPAEI-EQLKKLQKLDLSVNQFTTFPKEIGK-LENLQTLNLQRNQLTNLP--A 508

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L 
Sbjct: 509 EIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQ 568

Query: 530 DNNIS 534
           +N  S
Sbjct: 569 NNQFS 573



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTE--------LIASKNLLN 197
           ++  N L+                    V  + +  +  +  E         +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 240/515 (46%), Gaps = 25/515 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +D+  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L   P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN       
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLN 345

Query: 344 TKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEITKLD 386
             ++       LS+  K+ S            L G+NL     S +P EI     +  L 
Sbjct: 346 LAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLA 405

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++ 
Sbjct: 406 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE- 463

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ LDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDL 521

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 172/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N ++ 
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 251/528 (47%), Gaps = 78/528 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  VP E+              +   L++L L  N +  +  ++  L  LT L
Sbjct: 3   LNLSGNQLTSVPAEI-------------GQLTSLERLCLNDNQLTSVPAEIGRLASLTEL 49

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LPA IG+L  L+ L +  N +  +P EIG   +L       NQL  +P+ +
Sbjct: 50  YLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEI 109

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L      NN ++S+P ++   + +  LD++ N+LT                    
Sbjct: 110 GQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLT-------------------- 149

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                +P  +G L+ L  L L  NR+ S+P+ I    SL + Y+ +N L+++PAE+ +L+
Sbjct: 150 ----SVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLT 205

Query: 254 KLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L     E  QL L   L L++N L+GLP EIG++T+LR L L GN L +
Sbjct: 206 SLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTS 265

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S                            +EL L+G  L+++
Sbjct: 266 V---------PAEIGQLMSL---------------------------RELYLQGNQLTSV 289

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   +  L+LS N +  +P E+     L  L LS N +   P  I   L SL  L
Sbjct: 290 PAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEI-GQLMSLRLL 348

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            LD+N L  VP++    +  L+ L L+ N+  L   P       ++ELYL   QL   P 
Sbjct: 349 DLDDNRLASVPAE-IGQLRSLRELFLNGNL--LTSVPAEIGQLTVRELYLENNQLTSVPA 405

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++ +L  L  L+LS+N L S+P     LTSL  L L+ N ++++P E+
Sbjct: 406 EVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEI 453



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 215/408 (52%), Gaps = 20/408 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  +  ++  L  L +L + +N+LS +PA IG L  LK LD+  N +  +
Sbjct: 92  LDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSV 151

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T+L       N+L  +P+ +G+  +L     ++N +TS+P ++   + + +L 
Sbjct: 152 PAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELY 211

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+LT L    I    +L EL  + N L G+P  IG L+ L  L L+ N++ S+P+ I
Sbjct: 212 LEDNRLTSLPAE-IGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEI 270

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL E Y+  N L+++PAE+G+L+ L  L+L  NQL     E  QL  L  LDLS N
Sbjct: 271 GQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYN 330

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++ +LR L L  N L ++         PA +  LRS        E     
Sbjct: 331 YLTSLPAEIGQLMSLRLLDLDDNRLASV---------PAEIGQLRSL------RELFLNG 375

Query: 346 EDLITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             L ++   +  +T +EL LE   L+++P+E+ +   + +L+LSRN +  +P E+    S
Sbjct: 376 NLLTSVPAEIGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTS 435

Query: 405 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
           L+ L+L+ N++   P  I  LTSL  L     +   +R++   G K +
Sbjct: 436 LRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGEPAAIRKLREAGCKVV 483



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 171/329 (51%), Gaps = 26/329 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L L +  L  VP E+              +   L+KL +A N +  +  ++  L  L  
Sbjct: 163 ALRLQHNRLTSVPAEI-------------GQLASLEKLYVADNQLTSMPAEIWRLTSLRE 209

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LPA IG+L +LK L ++ N +  +P EIG  T+L       NQL  +P+ 
Sbjct: 210 LYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAE 269

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ ++L +     N +TS+P ++   + +  L++ GN+LT +    I   T L  L  S
Sbjct: 270 IGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAE-IGQLTFLGCLDLS 328

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  LDL  NR+ S+P+ I    SL E ++  N L+++PAE+G+L
Sbjct: 329 YNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL 388

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN--- 308
           + +  L L +NQL     E  QL  L  L+LS N L+ +P EIG +T+LR LLL GN   
Sbjct: 389 T-VRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLT 447

Query: 309 -------PLRTLRSSLVNGPTPALLKYLR 330
                   L +LR   ++   PA ++ LR
Sbjct: 448 SVPGEIGQLTSLRLLFLSSGEPAAIRKLR 476


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 242/497 (48%), Gaps = 42/497 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L++L +A   + +L   L  LP +  L VS   L+ LP  +G+   L  L+V+ N I 
Sbjct: 241 VNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIR 300

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +G  T L   D S+N L  LP+S+  C  L+     NN I +LP D+   + ++ 
Sbjct: 301 ALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTS 360

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            +VE N+L  L  + IA  + L  L  + N L  +P+ +G LS L  L ++ N++  +P 
Sbjct: 361 FNVEHNQLGSLPES-IAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPE 419

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           S+    +L    +  N L  LP  +G+   L  ++L+ NQ          L +L  +++ 
Sbjct: 420 SMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIR 479

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN ++ +P  +GK T LR L ++ N +R L +S+                          
Sbjct: 480 NNRVAFIPSNVGKATNLRNLNVSENCIRVLPASI-------------------------- 513

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                     +L      L L    L+ +P EI     +  LDLS N + ELP  ++   
Sbjct: 514 ---------GKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLE 564

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           +LQ L L+ N++K  P A L+ L +L  LK+D+N L+++ S G   +P L+IL  ++N +
Sbjct: 565 NLQELYLNNNQLKALPAA-LSRLKNLRVLKVDHNQLKEL-SKGLDQLPFLKILTAAHNQL 622

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
            +LP N  F+    L +L L   QL   P+D+  L  L +LDL  N L  +PE  K    
Sbjct: 623 ETLPVN--FTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLPESLKQCRK 680

Query: 523 LTELDLSDNNISALPPE 539
           L +L L+DN + ++  E
Sbjct: 681 LKKLLLNDNQLKSIKVE 697



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 235/483 (48%), Gaps = 38/483 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           IL    +   LN++N  +R +P             D   +   L+ L +++N + +L   
Sbjct: 282 ILGQCFSLDQLNVANNEIRALP-------------DSLGQLTQLKTLDVSNNLLNRLPNS 328

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +    LLTVL++ +N++  LPA IG+L  L S +V  N +  +P+ I   + L     ++
Sbjct: 329 MTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNN 388

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP  LG+   L+    +NN +T LPE +     +  L ++ NKL +L  N I  W
Sbjct: 389 NYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKN-IGQW 447

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  +  + N  + +PET+  L +L  +++  NR+  IPS++    +L    +  N + 
Sbjct: 448 RNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIR 507

Query: 244 ALPAELGKL-SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            LPA +GKL + L +L L  NQL +   E    L L  LDLS+N L+ LP  I ++  L+
Sbjct: 508 VLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQ 567

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSK 360
           +L L  N L+ L ++L      + LK LR  ++  N+  E S   + L  +        K
Sbjct: 568 ELYLNNNQLKALPAAL------SRLKNLRVLKVDHNQLKELSKGLDQLPFL--------K 613

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L+     L  +P     + ++ +L LS N +  LP ++    +L  L L  N + D P+
Sbjct: 614 ILTAAHNQLETLPVNFTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLPE 673

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
           + L     L  L L++N L+ +  +G+++   LQ L L  N IA LPEN     L  L+ 
Sbjct: 674 S-LKQCRKLKKLLLNDNQLKSIKVEGWQE---LQYLALKNNQIAVLPEN--LHQLIGLRT 727

Query: 480 LYL 482
           LYL
Sbjct: 728 LYL 730



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 225/460 (48%), Gaps = 25/460 (5%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  + +L  L++L ++  SI + P  I   T+L K       L  +  ++   +NL + 
Sbjct: 187 LPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEEL 246

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           + ++  +T LP  L     +  L+V G  LT L  N++     L +L  + N +  +P++
Sbjct: 247 RIASARLTQLPVSLGKLPAIKYLEVSGALLTTLP-NILGQCFSLDQLNVANNEIRALPDS 305

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +G L++L  LD+  N +  +P+S++ C  L   ++ NN +  LPA++GKL+ L + ++  
Sbjct: 306 LGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEH 365

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL        ++  L  L L+NN L+ LP ++G+++ L  L +  N L  L  S+V   
Sbjct: 366 NQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLV 425

Query: 322 TPALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
               L   R++   LP+N            I     L V    ++L       IP  +++
Sbjct: 426 NLRYLLLKRNKLRMLPKN------------IGQWRNLEV----INLNHNQFDHIPETLFD 469

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             ++  +++  N +  +P  +    +L+ L +S N I+  P +I    + L+ L L  N 
Sbjct: 470 LPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQ 529

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L QVP +   ++  L  LDLS+N +  LP +   + L +LQELYL   QL+  P  + RL
Sbjct: 530 LTQVPEE-IGNLLHLVTLDLSHNQLTELPTS--ITQLENLQELYLNNNQLKALPAALSRL 586

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + LR+L +  N L+ + +G   L  L  L  + N +  LP
Sbjct: 587 KNLRVLKVDHNQLKELSKGLDQLPFLKILTAAHNQLETLP 626



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 196/422 (46%), Gaps = 26/422 (6%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYK-------NFDEAGEG---DKWWEAVDLQKLILAH 54
           + A +    L++ N  ++ +P ++ K       N +    G   +   E   L  L L +
Sbjct: 329 MTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNN 388

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L + L  L  LT+L V++N+L++LP ++  L  L+ L +  N +  +P  IG   
Sbjct: 389 NYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWR 448

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L   + + NQ   +P +L     L      NN +  +P ++   + +  L+V  N + V
Sbjct: 449 NLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRV 508

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  ++    T L  L  +KN L  +PE IG+L  L+ LDL  N++  +P+SI+   +L E
Sbjct: 509 LPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQE 568

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
            Y+ NN L ALPA L +L  L  L +  NQLKE      QL  L +L  ++N L  LP  
Sbjct: 569 LYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKILTAAHNQLETLPVN 628

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
             + + L +L+L+ N L  L         P+ +  L + +  +      T   + +    
Sbjct: 629 FTRSSQLHQLVLSHNQLNVL---------PSDMGDLNNLVLLDLQGNVLTDLPESLKQCR 679

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           +L    K+L L    L +I  E W+  E+  L L  N I  LP  L     L+TL L+ N
Sbjct: 680 KL----KKLLLNDNQLKSIKVEGWQ--ELQYLALKNNQIAVLPENLHQLIGLRTLYLNNN 733

Query: 414 KI 415
            I
Sbjct: 734 PI 735



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 199/437 (45%), Gaps = 65/437 (14%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  L +   L     +N  I   P+ ++  + + KL V    L  +  N I++   L E
Sbjct: 187 LPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDEN-ISNLVNLEE 245

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  +   L  +P ++G L  +  L++    + ++P+ +  C SL +  + NN + ALP  
Sbjct: 246 LRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDS 305

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           LG+L++L TLD+ +N L      + AC+L L+VL + NN +  LP +IGK+  L    + 
Sbjct: 306 LGQLTQLKTLDVSNNLLNRLPNSMTACKL-LTVLHIKNNQIKTLPADIGKLAHLTSFNVE 364

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L +L  S+                     +E ST                  L L  
Sbjct: 365 HNQLGSLPESI---------------------AEISTLGN---------------LFLNN 388

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+++P ++ +   +T L ++ N + +LP  +    +L+ L+L RNK++  P  I    
Sbjct: 389 NYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNI-GQW 447

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS------------ 473
            +L  + L++N    +P   F D+P LQ +++  N +A +P N   ++            
Sbjct: 448 RNLEVINLNHNQFDHIPETLF-DLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCI 506

Query: 474 --LP--------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
             LP        HL  L+L + QL + P +I  L  L  LDLS N L  +P     L +L
Sbjct: 507 RVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENL 566

Query: 524 TELDLSDNNISALPPEL 540
            EL L++N + ALP  L
Sbjct: 567 QELYLNNNQLKALPAAL 583



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  +EL +    L+ +P  + +   I  L++S   +  LP  L  C SL  L ++ N+I+
Sbjct: 241 VNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIR 300

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             PD+ L  L+ L  L + NN L ++P +      +L +L +  N I +LP +     L 
Sbjct: 301 ALPDS-LGQLTQLKTLDVSNNLLNRLP-NSMTACKLLTVLHIKNNQIKTLPAD--IGKLA 356

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           HL    +   QL   P  I  +  L  L L+ N L S+P+    L+ LT L +++N ++ 
Sbjct: 357 HLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQ 416

Query: 536 LPPELV 541
           LP  +V
Sbjct: 417 LPESMV 422


>gi|328768383|gb|EGF78429.1| hypothetical protein BATDEDRAFT_90637 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 632

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 171/565 (30%), Positives = 289/565 (51%), Gaps = 39/565 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK-------------NFDEAGEGDKWWEAVDL 47
           + ++++A+R++G LN+SN  L  +P+EV+              +FD   +   WWE  +L
Sbjct: 41  LQKLIQASRSNGRLNISNLELESIPDEVWGTNAAACQSTVLDVSFDRPLDQGSWWEVCEL 100

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           ++L+ A N+I  +   + +L  L +L++ +N++S +P  +G L  L  L++SFN I  +P
Sbjct: 101 KRLVAADNHITAIDPRIADLGALVMLDLHNNQISSIPDVVGSLQALSILNLSFNCITCLP 160

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D +     LV+     N L +L  ++G    LS    S+N +++LP  ++  + ++KL+V
Sbjct: 161 DSLFQ-LPLVELHVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISKMTCLTKLNV 219

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMP----ETIGSLSRLIRLDLHQNRILSIP 223
             N+LT L +  +++   LTEL  S NLL  +     +TI SL +L  LD+  NR+ S+ 
Sbjct: 220 SKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTI-SLPKLKILDVKHNRLSSLT 278

Query: 224 SSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
             ++ C  L +  +  N LS++ P     L +L TLDL  N L     +  QL RL  LD
Sbjct: 279 VKLT-CPELVDLCLSFNNLSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLHRLKRLD 337

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L+NN++S L PE+G +  L   L+ GNP+R L +      T  LL++L+ R+     S  
Sbjct: 338 LTNNNISRLQPELGLLHNLTMFLVYGNPIRGLPTL---DSTVKLLEHLQKRIVIPASSHQ 394

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELS 400
                +   ++  +  +     L  +  S++ PS+   +  I  ++LS   +  L  ++ 
Sbjct: 395 IQPNANNAVVSRGIDQSDSLPPLHHLQQSSVAPSQQEYSSRI--MNLSNQGLDVLGGDIL 452

Query: 401 SCASL--QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           S       T+ +S+N++K+ P+      +S+  L    N L   P+  F     L+ILDL
Sbjct: 453 SNFDFAPSTIDVSQNRLKNLPNHFNEYSNSVVTLIARQNLLTVFPNIPFGH---LKILDL 509

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG- 516
           S N I  L E+ P   LP L EL L   QL   P+  L    L +L +S N L++I    
Sbjct: 510 SRNKITQLSESLPL--LPRLDELNLSFNQLVYLPSQ-LSFPNLTVLLVSNNRLEAIDPHM 566

Query: 517 -FKNLTSLTELDLSDNNISALPPEL 540
             + +  +  LD+S+N+I  +PPEL
Sbjct: 567 LIQCIPGIQILDVSNNSIQTIPPEL 591



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 45/345 (13%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           + N      G  +++ + L+ L L  N +  + +D   L  L  L++++N +S L   +G
Sbjct: 293 FNNLSSIAPG-VFFDLIQLETLDLRDNALCVVPDDTLQLHRLKRLDLTNNNISRLQPELG 351

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATAL------VKFDCSSNQLKELPSS----LGRCLN 138
            LH L    V  N I  +P    +   L      +    SS+Q++  P++    + R ++
Sbjct: 352 LLHNLTMFLVYGNPIRGLPTLDSTVKLLEHLQKRIVIPASSHQIQ--PNANNAVVSRGID 409

Query: 139 LSD------------------------FKASNNCITSLPEDLADCSKM--SKLDVEGNKL 172
            SD                           SN  +  L  D+        S +DV  N+L
Sbjct: 410 QSDSLPPLHHLQQSSVAPSQQEYSSRIMNLSNQGLDVLGGDILSNFDFAPSTIDVSQNRL 469

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L N+       +  LIA +NLL   P        L  LDL +N+I  +  S+     L
Sbjct: 470 KNLPNHFNEYSNSVVTLIARQNLLTVFPNI--PFGHLKILDLSRNKITQLSESLPLLPRL 527

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG 289
            E  +  N L  LP++L     L  L + +N+L+    + +  C   + +LD+SNNS+  
Sbjct: 528 DELNLSFNQLVYLPSQLS-FPNLTVLLVSNNRLEAIDPHMLIQCIPGIQILDVSNNSIQT 586

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PPE+  +  ++ L L+GN  R  R++++   T A+ +YL+SR+P
Sbjct: 587 IPPELALLPCIKSLQLSGNMFRVPRAAILQKGTEAICEYLKSRIP 631



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 177/422 (41%), Gaps = 49/422 (11%)

Query: 47  LQKLILAHNNIEKLKE-DLRNLPLLTVLNVSHNKLSELPA-AIGELHM--LKSLDVSFNS 102
           L KL ++ N +  L+  DL  +  LT LN+S+N L+ L A +I  + +  LK LDV  N 
Sbjct: 214 LTKLNVSKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTISLPKLKILDVKHNR 273

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           +  +  ++ +   LV    S N L  + P      + L      +N +  +P+D     +
Sbjct: 274 LSSLTVKL-TCPELVDLCLSFNNLSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLHR 332

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +LD+  N ++ L   L      LT  +   N + G+P    +L   ++L  H  + + 
Sbjct: 333 LKRLDLTNNNISRLQPEL-GLLHNLTMFLVYGNPIRGLP----TLDSTVKLLEHLQKRIV 387

Query: 222 IPSS---ISGCCSLAEFYMGNNALSALP------------------AELGKLSKLGTLDL 260
           IP+S   I    + A    G +   +LP                  + +  LS  G   L
Sbjct: 388 IPASSHQIQPNANNAVVSRGIDQSDSLPPLHHLQQSSVAPSQQEYSSRIMNLSNQGLDVL 447

Query: 261 HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
             + L  +         S +D+S N L  LP    + +     L+    L T+  ++  G
Sbjct: 448 GGDILSNF-----DFAPSTIDVSQNRLKNLPNHFNEYSNSVVTLIARQNLLTVFPNIPFG 502

Query: 321 PTPALLKYLRSRLPENEDS--------EASTTKEDLITMATRLSVTSKELSLEGMN-LSA 371
               +L   R+++ +  +S        E + +   L+ + ++LS  +  + L   N L A
Sbjct: 503 HL-KILDLSRNKITQLSESLPLLPRLDELNLSFNQLVYLPSQLSFPNLTVLLVSNNRLEA 561

Query: 372 IPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           I     I     I  LD+S NSIQ +PPEL+    +++L LS N  +    AIL   +  
Sbjct: 562 IDPHMLIQCIPGIQILDVSNNSIQTIPPELALLPCIKSLQLSGNMFRVPRAAILQKGTEA 621

Query: 430 SC 431
            C
Sbjct: 622 IC 623


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 160/493 (32%), Positives = 242/493 (49%), Gaps = 20/493 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L +  N I+ L + L  +  LT L +  NK+  LP    E+  L  L +  + + +I
Sbjct: 74  LTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEI 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + S T L     S N L+ LP S+    NL       N ++ LPE +A  +++ +L 
Sbjct: 134 PELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELY 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKLT +    I   T LT L   +N +  +P+ IG L+ L  L L  N+I  IP +I
Sbjct: 194 IWENKLTEIP-QAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAI 252

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N ++ +P  +G L+ L +LDL  NQ+ E       L  L+ L L NN
Sbjct: 253 GNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNN 312

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            ++ LP  IG +T+L  L L  N +  L  ++ N     L       L  N+ +E   T 
Sbjct: 313 QIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGN-----LTSLTSLYLSNNQIAELPQTI 367

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +L       S+TS +LS     ++ +P  I     +T L+L  N I ELP  + +  SL
Sbjct: 368 GNLT------SLTSLDLSFN--QIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSL 419

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
             L LS N+I + P  I  +L+SL+ L L +N + ++P     ++  L  LDLS+N IA 
Sbjct: 420 TNLFLSNNQIAELPQTI-GNLTSLTSLNLWSNQIAELPQT-IGNLTSLTSLDLSFNQIAE 477

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LP+     +L  L  L L   Q+ E    I  L  L  LDLS N +  +P+   NLTSLT
Sbjct: 478 LPQ--MIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLTSLT 535

Query: 525 ELDLSDNNISALP 537
           +L L +N I+ +P
Sbjct: 536 DLKLYNNQIAVIP 548



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 223/422 (52%), Gaps = 17/422 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L  N++ +L E +  L  L  L +  NKL+E+P AIG+L  L SL++  N I +
Sbjct: 165 NLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAE 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T+L      SNQ+  +P ++G   +L+    S+N I  +PE + + + ++ L
Sbjct: 225 LPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++  L    I + T LT L    N +  +P+TIG+L+ L  L L +N+I  +P +
Sbjct: 285 DLSFNQIAELPQT-IGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQT 343

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL   Y+ NN ++ LP  +G L+ L +LDL  NQ+ E       L  L+ L+L N
Sbjct: 344 IGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYN 403

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ LP  IG +T+L  L L+ N +  L  ++ N     L       L  N+ +E   T
Sbjct: 404 NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGN-----LTSLTSLNLWSNQIAELPQT 458

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             +L       S+TS +LS     ++ +P  I     +T L+LS N I EL   + +  S
Sbjct: 459 IGNLT------SLTSLDLSFN--QIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTS 510

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  L LS N+I + P  I  +L+SL+ LKL NN +  +P + F+ +  L+ LDL  N   
Sbjct: 511 LSDLDLSNNQIAELPQTI-GNLTSLTDLKLYNNQIAVIP-EWFRSLNNLEKLDLRGNPVP 568

Query: 465 LP 466
           +P
Sbjct: 569 IP 570



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 247/506 (48%), Gaps = 45/506 (8%)

Query: 41  WW-EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           W+ E   L +L L ++ + ++ E + +L  LT L  S N L  LP +I  L  LK L + 
Sbjct: 113 WFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLG 172

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            NS+ ++P+ I   T L +     N+L E+P ++G+  +L+      N I  LP+ +   
Sbjct: 173 GNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKL 232

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + ++ L +  N++ ++    I + T LT L  S N +  +PE IG+L+ L  LDL  N+I
Sbjct: 233 TSLTSLKLWSNQIAIIP-EAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQI 291

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
             +P +I    SL    + NN ++ LP  +G L+ L  L L  N++ E       L  L+
Sbjct: 292 AELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLT 351

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L LSNN ++ LP  IG +T+L  L L+ N +                    + LP+   
Sbjct: 352 SLYLSNNQIAELPQTIGNLTSLTSLDLSFNQI--------------------AELPQ--- 388

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                      T+    S+TS  L+L    ++ +P  I     +T L LS N I ELP  
Sbjct: 389 -----------TIGNLTSLTS--LNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQT 435

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           + +  SL +L L  N+I + P  I  +L+SL+ L L  N + ++P     ++  L  L+L
Sbjct: 436 IGNLTSLTSLNLWSNQIAELPQTI-GNLTSLTSLDLSFNQIAELPQ-MIGNLTSLTNLNL 493

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           S+N IA L +     +L  L +L L   Q+ E P  I  L  L  L L  N +  IPE F
Sbjct: 494 SFNQIAELLQT--IGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWF 551

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
           ++L +L +LDL  N +  +PPE++  
Sbjct: 552 RSLNNLEKLDLRGNPV-PIPPEILGT 576



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 222/459 (48%), Gaps = 36/459 (7%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKF----------DCSSNQLKELPSSLGRCLNLSDFK 143
           K LD++  ++ ++P EIG  T L K               N L E+P  +     L+   
Sbjct: 19  KELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLD 78

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N I SLP+ LA  + ++KL + GNK+  L  N  +  T LTEL    + L  +PE +
Sbjct: 79  VWENKIKSLPDWLAQITNLTKLYLYGNKIESLP-NWFSEMTRLTELGLGNSGLAEIPELV 137

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            SL+ L  L   +N +  +P SIS   +L +  +G N+LS LP  +  L++L  L +  N
Sbjct: 138 FSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWEN 197

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +L E      +L  L+ L+L  N ++ LP  IGK+T+L  L L  N +  +  ++ N  +
Sbjct: 198 KLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTS 257

Query: 323 PALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              L    ++   +PE               +    S+TS +LS     ++ +P  I   
Sbjct: 258 LTALGLSSNQIAIIPE--------------AIGNLTSLTSLDLSFN--QIAELPQTIGNL 301

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +T L L  N I ELP  + +  SL  L L RNKI + P  I  +L+SL+ L L NN +
Sbjct: 302 TSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTI-GNLTSLTSLYLSNNQI 360

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
            ++P     ++  L  LDLS+N IA LP+     +L  L  L L   Q+ E P  I  L 
Sbjct: 361 AELPQT-IGNLTSLTSLDLSFNQIAELPQT--IGNLTSLTSLNLYNNQIAELPQTIGNLT 417

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L  L LS N +  +P+   NLTSLT L+L  N I+ LP
Sbjct: 418 SLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELP 456



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 196/388 (50%), Gaps = 29/388 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL    + ++P  + K                L  L L  N I  + E + NL  LT 
Sbjct: 214 SLNLGENQIAELPQMIGK-------------LTSLTSLKLWSNQIAIIPEAIGNLTSLTA 260

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+++ +P AIG L  L SLD+SFN I ++P  IG+ T+L      +NQ+ ELP +
Sbjct: 261 LGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQT 320

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L++     N I  LP+ + + + ++ L +  N++  L    I + T LT L  S
Sbjct: 321 IGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQT-IGNLTSLTSLDLS 379

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+TIG+L+ L  L+L+ N+I  +P +I    SL   ++ NN ++ LP  +G L
Sbjct: 380 FNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNL 439

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L +L+L SNQ+ E       L  L+ LDLS N ++ LP  IG +T+L  L L+ N + 
Sbjct: 440 TSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIA 499

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  ++ N  + + L      L  N+ +E   T  +L ++         +L L    ++ 
Sbjct: 500 ELLQTIGNLTSLSDLD-----LSNNQIAELPQTIGNLTSLT--------DLKLYNNQIAV 546

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPEL 399
           IP        + KLDL  N +  +PPE+
Sbjct: 547 IPEWFRSLNNLEKLDLRGNPV-PIPPEI 573



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  + ++P  +         G+       L  L L+ N I +L + + NL  LT 
Sbjct: 352 SLYLSNNQIAELPQTI---------GN----LTSLTSLDLSFNQIAELPQTIGNLTSLTS 398

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+++ELP  IG L  L +L +S N I ++P  IG+ T+L   +  SNQ+ ELP +
Sbjct: 399 LNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQT 458

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L+    S N I  LP+ + + + ++ L++  N++  L    I + T L++L  S
Sbjct: 459 IGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQT-IGNLTSLSDLDLS 517

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+TIG+L+ L  L L+ N+I  IP       +L +  +  N +   P  LG  
Sbjct: 518 NNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPEILGTN 577

Query: 253 SKL 255
            K 
Sbjct: 578 KKF 580



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 40/233 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  + ++P  +         G+       L  L L++N I +L + + NL  LT 
Sbjct: 398 SLNLYNNQIAELPQTI---------GN----LTSLTNLFLSNNQIAELPQTIGNLTSLTS 444

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+++ELP  IG L  L SLD+SFN I ++P  IG+ T+L   + S NQ+ EL  +
Sbjct: 445 LNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQT 504

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +LSD   SNN I  LP+ + + + ++ L +  N++ V+                 
Sbjct: 505 IGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVI----------------- 547

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                  PE   SL+ L +LDL  N +  IP  I G     +FY     L A+
Sbjct: 548 -------PEWFRSLNNLEKLDLRGNPV-PIPPEILGTNK--KFYEDPGDLQAI 590



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 136/303 (44%), Gaps = 33/303 (10%)

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL----------TGNP 309
           + + +  E    A + +   LDL+  +L+ LPPEIGK+T L KL+L           GN 
Sbjct: 1   MEAQEFLELIDRAAEEQWKELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNL 60

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK--------------EDLITMATRL 355
           L  +   +++ P    L    +++    D  A  T                +  +  TRL
Sbjct: 61  LTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRL 120

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +    EL L    L+ IP  ++    +T L  S N++Q LP  +S+  +L+ L L  N +
Sbjct: 121 T----ELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSL 176

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P++I   L+ L  L +  N L ++P      +  L  L+L  N IA LP+      L
Sbjct: 177 SQLPESI-ALLTELEELYIWENKLTEIPQ-AIGKLTSLTSLNLGENQIAELPQ--MIGKL 232

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L  L L   Q+   P  I  L  L  L LS N +  IPE   NLTSLT LDLS N I+
Sbjct: 233 TSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIA 292

Query: 535 ALP 537
            LP
Sbjct: 293 ELP 295


>gi|312373148|gb|EFR20955.1| hypothetical protein AND_18230 [Anopheles darlingi]
          Length = 606

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 270/577 (46%), Gaps = 56/577 (9%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYK-------------NFDEAGEGDKWWEAVDLQKLI 51
           +K A  +G LNL+ + L  VP +V+              + D   E D WW    L  L 
Sbjct: 38  IKQALKTGVLNLAGKGLASVPEKVWNLSDSDENEKEVRYDLDRTQEEDSWWNQKSLTTLD 97

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  L+V+ N + ++PD   
Sbjct: 98  LSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGIGALTKLSKLNVARNKLAELPDSFF 157

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN-------------------NCITSL 152
               L   + S N+  E+  ++   + L   K +N                   N I  L
Sbjct: 158 GLKELKHLNLSHNEFPEVHPNISDLIMLETLKGTNLYFHSRLRSRGHEPQDISFNSINLL 217

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  +    ++ +L +  N+LT L N+ I +   L +L  SKN L  +P  +G L +L   
Sbjct: 218 PGGIGFLVRLQQLTLNNNRLTELPND-IVNLRNLHKLDLSKNDLKRLPPVMGELRKLECF 276

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVE 271
            +  N I  +P   +GC +L E +M NN +  LPA+  + L +L  LDL  N+++    E
Sbjct: 277 YVQHNDIDELP-DFTGCEALKELHMANNFIRTLPADFCENLPQLRVLDLRDNKIERLPDE 335

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L  L+ LDLSNN++S LP  +  +  L  L + GNP+R++R  ++   T  +LK LR
Sbjct: 336 IALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLR 395

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
            R            K+         + +SK         +  P ++++  +   L +S  
Sbjct: 396 ER---------DGPKQSNSRSTETSTTSSKGTGGFFEEAATFP-DVYQMRKGRALIVSSK 445

Query: 391 SIQELPPEL---SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           ++ ++P ++   +  A++  + +S+NK+ + P  +    S L+ L +  N LR VPS  F
Sbjct: 446 ALVDMPEQVFCDAREAAVYNVDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPS-FF 504

Query: 448 KDIPMLQILDLSYNIASLPENPPFSS-LPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                +  L+LS N  SL E P     L  L+EL +   QLR   + +  L+ L IL  S
Sbjct: 505 SQFDKIAYLNLSNN--SLEELPEVVGLLVTLRELNVVNNQLRCLSSSVYELKGLEILLAS 562

Query: 507 QNSLQSI---PEGFKNLTSLTELDLSDNNISALPPEL 540
            N ++ I     G   L  L  LDL++NNI  +PP L
Sbjct: 563 GNRIEEIDASETGLGALKRLATLDLANNNIKHVPPVL 599



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 44/334 (13%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N +  I  +I     L    + +NAL++LP  +G L+KL  L++  N+L E 
Sbjct: 93  LTTLDLSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGIGALTKLSKLNVARNKLAEL 152

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L+ L  L+LS+N    + P I  +  L  L                G       
Sbjct: 153 PDSFFGLKELKHLNLSHNEFPEVHPNISDLIMLETL---------------KGTNLYFHS 197

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LRSR  E +D   S    +L+       V  ++L+L    L+ +P++I     + KLDL
Sbjct: 198 RLRSRGHEPQD--ISFNSINLLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKLDL 255

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N ++ LPP +     L+   +  N I + PD   T   +L  L + NN +R +P+D  
Sbjct: 256 SKNDLKRLPPVMGELRKLECFYVQHNDIDELPD--FTGCEALKELHMANNFIRTLPADFC 313

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +++P L++LDL  N                        ++   P +I  L  L  LDLS 
Sbjct: 314 ENLPQLRVLDLRDN------------------------KIERLPDEIALLASLTRLDLSN 349

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           N++ S+P     L  L  L +  N I ++  +++
Sbjct: 350 NTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDII 383



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 45/320 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+++N  +R +P +  +N  +            L+ L L  N IE+L +++  L  LT L
Sbjct: 298 LHMANNFIRTLPADFCENLPQ------------LRVLDLRDNKIERLPDEIALLASLTRL 345

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKF----------- 119
           ++S+N +S LP+ +  L  L SL V  N I  I  +I   G+   L              
Sbjct: 346 DLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLRERDGPKQSNS 405

Query: 120 ---------DCSSNQLKELPSSLGRCLNLSDFKA---SNNCITSLPEDL---ADCSKMSK 164
                       +    E  ++      +   +A   S+  +  +PE +   A  + +  
Sbjct: 406 RSTETSTTSSKGTGGFFEEAATFPDVYQMRKGRALIVSSKALVDMPEQVFCDAREAAVYN 465

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +DV  NKL  +   L    + LTEL  S NLL  +P       ++  L+L  N +  +P 
Sbjct: 466 VDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPSFFSQFDKIAYLNLSNNSLEELPE 525

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 280
            +    +L E  + NN L  L + + +L  L  L    N+++E       L    RL+ L
Sbjct: 526 VVGLLVTLRELNVVNNQLRCLSSSVYELKGLEILLASGNRIEEIDASETGLGALKRLATL 585

Query: 281 DLSNNSLSGLPPEIGKMTTL 300
           DL+NN++  +PP +G +  +
Sbjct: 586 DLANNNIKHVPPVLGTLKNI 605



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +T LDLS N++  +   + + A L  L L  N +   P+ I  +L+ LS L +  
Sbjct: 88  WNQKSLTTLDLSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGI-GALTKLSKLNVAR 146

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L ++P D F  +  L+ L+LS+N    PE +P  S L  L+ L    +         L
Sbjct: 147 NKLAELP-DSFFGLKELKHLNLSHN--EFPEVHPNISDLIMLETLKGTNLYFHSR----L 199

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +     D+S NS+  +P G   L  L +L L++N ++ LP ++V++
Sbjct: 200 RSRGHEPQDISFNSINLLPGGIGFLVRLQQLTLNNNRLTELPNDIVNL 247


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 249/546 (45%), Gaps = 61/546 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+  P E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  NPL  
Sbjct: 256 NLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSL 315

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS--------- 363
                +    P     LR  + EN         ++       LS+  K+ S         
Sbjct: 316 KERKRIQKLFPDSNLDLRE-VAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILK 374

Query: 364 ---LEGMNL-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
              L G+NL     S +P EI     +  L L  N ++ +P E+    +L+ L L  N++
Sbjct: 375 FRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANEL 434

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
           +  P  I   L +L  L L  N L+  P++  + +  LQ LDLS N   + P+      L
Sbjct: 435 ERLPKEI-GQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKL 490

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQ L L+R QL     +I +LQ L+ LDL+ N    +P+    L  L  LDL +N ++
Sbjct: 491 ENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 550

Query: 535 ALPPEL 540
            LP E+
Sbjct: 551 TLPTEI 556



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 66/449 (14%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +  +   ++L  +L   LN+     S   +T+LP+++     + +L+++ N LTVL    
Sbjct: 31  EVEAGTYRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKE- 89

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  
Sbjct: 90  IGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYK 149

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+  P E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++ 
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L TL         P  +  L++                           
Sbjct: 210 NLQTLNLQDNQLATL---------PVEIGQLQN--------------------------- 233

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L+  P EI +   +  L    N +  LP E+    +LQTL L  N++  +
Sbjct: 234 LQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVF 293

Query: 419 PDAILTSLSSLSCLKLDNNP-------------------LRQVPSDG-FKDIPM-----L 453
           P  I   L +L  L+L  NP                   LR+V  +G ++++ +     L
Sbjct: 294 PKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPL 352

Query: 454 QILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           ++ +LS       ++ P       +L+ L L        P +I RL+ L+ L L  N L+
Sbjct: 353 KVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLK 412

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +IP     L +L  L+L  N +  LP E+
Sbjct: 413 NIPSEIGQLKNLEALNLEANELERLPKEI 441



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 172/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 241/515 (46%), Gaps = 25/515 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN       
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLN 345

Query: 344 TKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEITKLD 386
             ++       LS+  K+ S            L G+NL     S +P EI     +  L 
Sbjct: 346 LAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLA 405

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++ 
Sbjct: 406 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE- 463

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ LDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDL 521

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 171/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 245/518 (47%), Gaps = 48/518 (9%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y++F+EA +       +D++ L L +N +     ++  L  L  L++++N+L  LP  
Sbjct: 25  KFYRDFNEALKN-----PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE 79

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           I  L  LK L +S N +  +P EIG+   L   D   NQL+ LPS +G+  +L      +
Sbjct: 80  IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEH 139

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + +LP+++     + +L++  N+L +LS   I +   L +L    N L  +P+ IG L
Sbjct: 140 NQLITLPQEIGTLQDLEELNLANNQLRILSKE-IGTLQHLQDLSVFNNQLITLPQEIGKL 198

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L L  N++ ++P  I    +L +  + NN L  LP E+G L  L +L+L +N+L 
Sbjct: 199 QNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLV 258

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E   L +L  L L+NN L+ LP EIGK+  L  L LT N L++L   +  G    L
Sbjct: 259 TLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEI--GKLQNL 316

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
                                             KEL LE   L + P EI     + +L
Sbjct: 317 ----------------------------------KELILENNRLESFPKEIGTLSNLQRL 342

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            L  N    LP E+ +   L  L L  N++   P  I   L  L  L L NN L  +P +
Sbjct: 343 HLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEI-GRLERLEWLNLYNNRLATLPKE 401

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  LQ L L+ N +A+LP+      L +L++L L   QL   P +I  LQ+L  L 
Sbjct: 402 -IGTLRKLQHLYLANNQLATLPKE--IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLS 458

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           L  N L+++ +    L +L +LDLS N  +  P E+V 
Sbjct: 459 LKNNQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEIVG 496



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 150/465 (32%), Positives = 227/465 (48%), Gaps = 40/465 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L+ +P E+     E  +  KW        L L+ N ++ L +++  L  L VL
Sbjct: 66  LSLANNQLKTLPKEI-----ETLQKLKW--------LYLSENQLKTLPKEIGTLQNLEVL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP+ IG+L  L+ L +  N ++ +P EIG+   L + + ++NQL+ L   +
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEI 172

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L D    NN + +LP+++     +  L +  N+LT L    I     L +L    
Sbjct: 173 GTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKE-IGRLENLQDLNIFN 231

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL 
Sbjct: 232 NQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQ 291

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L +NQLK    E  +L+ L  L L NN L   P EIG ++ L++L L  N   T
Sbjct: 292 KLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTT 351

Query: 313 LRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           L         P  +  L  RLP  N +    TT    I    RL      L+L    L+ 
Sbjct: 352 L---------PEEIGTLH-RLPWLNLEHNQLTTLPQEIGRLERLEW----LNLYNNRLAT 397

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI    ++  L L+ N +  LP E+    +L+ L LS N++   P+ I T L  L  
Sbjct: 398 LPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGT-LQRLEW 456

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
           L L NN LR + S     +  L+ LDLS N        PF++ P 
Sbjct: 457 LSLKNNQLRTL-SQEIGQLQNLKDLDLSGN--------PFTTFPQ 492



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 191/433 (44%), Gaps = 52/433 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    LR +P+E+ K                L++L L HN +  L +++  L  L  L
Sbjct: 112 LDLYKNQLRTLPSEIGK-------------LRSLERLHLEHNQLITLPQEIGTLQDLEEL 158

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+++N+L  L   IG L  L+ L V  N ++ +P EIG    L     + NQL  LP  +
Sbjct: 159 NLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEI 218

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  NL D    NN + +LP+++     +  L++  N+L  L    I +   L  L  + 
Sbjct: 219 GRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKE-IGTLQKLEWLYLTN 277

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L +L  L L  N++ S+P  I    +L E  + NN L + P E+G LS
Sbjct: 278 NQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLS 337

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+      E   L RL  L+L +N L+ LP EIG++  L  L L  N L T
Sbjct: 338 NLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 397

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         P  +  LR                             + L L    L+ +
Sbjct: 398 L---------PKEIGTLRK---------------------------LQHLYLANNQLATL 421

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  LDLS N +  LP E+ +   L+ L L  N+++     I   L +L  L
Sbjct: 422 PKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLSQEI-GQLQNLKDL 480

Query: 433 KLDNNPLRQVPSD 445
            L  NP    P +
Sbjct: 481 DLSGNPFTTFPQE 493



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 34/225 (15%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L L+N  L+ +P E+ K  N  E    +   E+         +LQ+L L +N    L E+
Sbjct: 296 LGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEE 355

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+ HN+L+ LP  IG L  L+ L++  N +  +P EIG+   L     ++
Sbjct: 356 IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLAN 415

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL D   S+N + +LPE++    ++  L ++ N+L  LS       
Sbjct: 416 NQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLS------- 468

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                            + IG L  L  LDL  N   + P  I G
Sbjct: 469 -----------------QEIGQLQNLKDLDLSGNPFTTFPQEIVG 496


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 235/477 (49%), Gaps = 51/477 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++  N+L+ LP  IG+L  L+ LD+  N I  +P EIG    L K 
Sbjct: 40  LTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S+NQLK LP  + +         + N  T+LP+++    ++  L++  N+L  L    
Sbjct: 100 DLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTL---- 155

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               P+ I  L  L  L+L  N++ ++P  I    +L    +GN
Sbjct: 156 --------------------PKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGN 195

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ L  E+GKL  L  LDL +NQL     +   L+ L  LDLS+N L+ LP +IGK+ 
Sbjct: 196 NKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQ 255

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 357
            L+ L L+GN L TL         P  + YL+  ++   ED++ +T  ++ I     L V
Sbjct: 256 NLQVLDLSGNQLTTL---------PKDIGYLKELQVLHLEDNQFTTLPKE-IGQLQNLRV 305

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               L L    L+ +P EI +   +  L L  N +  LP E+     LQ L LS N++  
Sbjct: 306 ----LYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTT 361

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ---ILDLSYN-IASLPENPPFSS 473
            P  I   L +L  L L +N L  +P    K+I  LQ   +L LSYN + SLP++     
Sbjct: 362 LPKEI-GELQNLQVLYLHSNQLTTLP----KEIGQLQNLPVLYLSYNQLTSLPKD--IGK 414

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           L +LQ+L L   QL   P +I +LQ L+ L LS N L+++P+    L  L  LDL D
Sbjct: 415 LQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRTLDLDD 471



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 202/395 (51%), Gaps = 16/395 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L++N ++ L +D+  L    VL++++N  + LP  IG+L  L+ L++  N +  
Sbjct: 95  ELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P +I     L   + ++NQLK LP  +G+  NL   +  NN +T L +++     +  L
Sbjct: 155 LPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L  + I     L +L  S N L  +P+ IG L  L  LDL  N++ ++P  
Sbjct: 215 DLTNNQLTTLPKD-IGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKD 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   ++ +N  + LP E+G+L  L  L L++NQL     E  +L+ L VL L +
Sbjct: 274 IGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHS 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG +  L++L L+ N L TL   +       +L YL S           TT
Sbjct: 334 NQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVL-YLHSN--------QLTT 384

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+++P +I +   + KLDLS N +  LP E+    +
Sbjct: 385 LPKEIGQLQNLPV----LYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQN 440

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           LQ L LS NK+K  PD I   L  L  L LD+ PL
Sbjct: 441 LQELYLSNNKLKTLPDEI-GKLQKLRTLDLDDIPL 474



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 167/336 (49%), Gaps = 37/336 (11%)

Query: 13  SLNLSNRSLRDVPNEV------------YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
            L+LSN  L+ +P ++            Y NF    +  +  +  +LQ L L +N ++ L
Sbjct: 98  KLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPK--EIGKLKELQGLELYNNQLKTL 155

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +D+  L  L VLN+++N+L  LP  IG+L  L+ L +  N +  +  EIG    L   D
Sbjct: 156 PKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLD 215

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL- 179
            ++NQL  LP  +G    L D   S+N +T+LP+D+     +  LD+ GN+LT L  ++ 
Sbjct: 216 LTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIG 275

Query: 180 ---------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
                                I     L  L    N L  +P+ IG L  L  L LH N+
Sbjct: 276 YLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQ 335

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + ++P  I     L E Y+ NN L+ LP E+G+L  L  L LHSNQL     E  QL+ L
Sbjct: 336 LTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNL 395

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            VL LS N L+ LP +IGK+  L+KL L+ N L TL
Sbjct: 396 PVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTL 431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 207/437 (47%), Gaps = 43/437 (9%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + + + + T ++  D   NQL  LP  +G+   L       N I +LP+++    ++ KL
Sbjct: 40  LTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKL 99

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L  ++      L  L  + N    +P+ IG L  L  L+L+ N++ ++P  
Sbjct: 100 DLSNNQLKTLPKDIEQLQKPLV-LHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKD 158

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L  LP ++GKL  L  L L +N+L     E  +L+ L VLDL+N
Sbjct: 159 IERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTN 218

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP +IG +  L+ L L+ N L                    + LP++        
Sbjct: 219 NQLTTLPKDIGHLKELQDLDLSHNKL--------------------TALPKD-------- 250

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L G  L+ +P +I    E+  L L  N    LP E+    +
Sbjct: 251 ----IGKLQNLQV----LDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQN 302

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L L  N++   P  I   L +L  L L +N L  +P +    +  LQ L LS N + 
Sbjct: 303 LRVLYLYNNQLTILPKEI-GKLQNLQVLYLHSNQLTTLPKE-IGHLKGLQELYLSNNQLT 360

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +LP+      L +LQ LYL   QL   P +I +LQ L +L LS N L S+P+    L +L
Sbjct: 361 TLPKE--IGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNL 418

Query: 524 TELDLSDNNISALPPEL 540
            +LDLS+N ++ LP E+
Sbjct: 419 QKLDLSNNQLTTLPNEI 435



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 177/353 (50%), Gaps = 23/353 (6%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            K   + + E + + + ++ LDL  N++ ++P  I     L +  +  N ++ LP E+G 
Sbjct: 33  EKGTYHNLTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGY 92

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLS-VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L +L  LDL +NQLK    +  QL+   VL L+ N+ + LP EIGK+  L+ L L  N L
Sbjct: 93  LKELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQL 152

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +TL         P  ++ L++    N  +++  T  +D I     L V    L L    L
Sbjct: 153 KTL---------PKDIERLQNLQVLNLTNNQLKTLPKD-IGKLQNLQV----LRLGNNKL 198

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +  EI +   +  LDL+ N +  LP ++     LQ L LS NK+   P  I   L +L
Sbjct: 199 TILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDI-GKLQNL 257

Query: 430 SCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
             L L  N L  +P D G+  +  LQ+L L  N   +LP+      L +L+ LYL   QL
Sbjct: 258 QVLDLSGNQLTTLPKDIGY--LKELQVLHLEDNQFTTLPKE--IGQLQNLRVLYLYNNQL 313

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I +LQ L++L L  N L ++P+   +L  L EL LS+N ++ LP E+
Sbjct: 314 TILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEI 366



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 18/135 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L  +P E+              E  +LQ L L  N +  L +++  L  L V
Sbjct: 351 ELYLSNNQLTTLPKEI-------------GELQNLQVLYLHSNQLTTLPKEIGQLQNLPV 397

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L+ LP  IG+L  L+ LD+S N +  +P+EIG    L +   S+N+LK LP  
Sbjct: 398 LYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDE 457

Query: 133 LG-----RCLNLSDF 142
           +G     R L+L D 
Sbjct: 458 IGKLQKLRTLDLDDI 472


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 249/553 (45%), Gaps = 76/553 (13%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILA 53
           ++K++     +NLS + L  +P +V+           N +      +    V+L+ L++ 
Sbjct: 118 MIKSSNGKYCVNLSGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQ 177

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +NNIE L +D+ +L  L VL +S+N+L+ +P  IG+L  LK L ++ N +  IP E+G  
Sbjct: 178 NNNIESLPKDIGSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKL 237

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L     SSNQL  LPS +     L++   +NN +  +P+ +    ++ KL + GN L 
Sbjct: 238 SELTVLGLSSNQLTSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQ 297

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  ++I +W  L +L  S N +  +P  I  +  L  L+L  N+I  I   I     L 
Sbjct: 298 TLP-SVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLR 356

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPP 292
              + NNAL  LP E+ +L  L  L +  N+LKE     C  L L  +  SNN L  +P 
Sbjct: 357 ILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPD 416

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           ++  ++ +  L L GN ++TL   + N                                 
Sbjct: 417 DVCLLSDVEILFLGGNAMKTLPIEITN--------------------------------M 444

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
            RLS     L+L+   L   P  +    E+  L++  N I  +P E+ + + LQ L LS 
Sbjct: 445 KRLS----HLTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSN 500

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
           NKI+ +P  I   L SL  L +  N LR++P++                           
Sbjct: 501 NKIQTFPLGI-CRLESLKTLDVSGNDLRELPTE-------------------------IK 534

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTSLTELDLSD 530
            L +L+EL+L + +    P  + RL  L  L L  N + S+ E     +L SL E+ LSD
Sbjct: 535 KLINLKELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEMHLSD 594

Query: 531 NNISALPPELVSV 543
           N     P EL  +
Sbjct: 595 NKFPHFPNELCVI 607



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 27/255 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++Q L +  N+I  +  ++ N+  L  L +S+NK+   P  I  L  LK+LDVS N + +
Sbjct: 469 EVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRE 528

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE--DLADCSKMS 163
           +P EI     L +   + N+ +  P+ + R  +L       N + S+ E  +L     + 
Sbjct: 529 LPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQ 588

Query: 164 KLDVEGNK-------LTVLSN------------------NLIASWTMLTELIASKNLLNG 198
           ++ +  NK       L V+SN                    IA    L EL    N L  
Sbjct: 589 EMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCKVRLLPECIAELVNLEELYVDNNALET 648

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  IG+L++L +L +  N I  +P S+    +L   ++ +N L  LP     L  +  L
Sbjct: 649 LPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHLESNQLMKLPVRFDNLINIADL 708

Query: 259 DLHSNQLKEYCVEAC 273
            L  N L     + C
Sbjct: 709 RLEFNPLMHPPKDVC 723



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L V +N L  LP  IG L  L+ L V  N+I  +P+ +     L      SNQL +LP  
Sbjct: 639 LYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHLESNQLMKLPVR 698

Query: 133 LGRCLNLSDFKASNNCITSLPEDLAD 158
               +N++D +   N +   P+D+ D
Sbjct: 699 FDNLINIADLRLEFNPLMHPPKDVCD 724


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 221/463 (47%), Gaps = 47/463 (10%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +L AA+     +KSL ++ + +  +  E+G+   L + +  +NQL  LP+ +G+  NL  
Sbjct: 29  DLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQV 88

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
               NN + +LP+++     + +L++E N+L  L                        P 
Sbjct: 89  LSLYNNRLRTLPQEVGTLQNLRELNLENNQLATL------------------------PN 124

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L+LH NR+ S+P  I     L   Y+G N L  LP E+G L  L  L L 
Sbjct: 125 GIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLS 184

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            +QLK +  E  +LR L  L L +N L  L  EIGK+ +L +L+L  N L TL + +  G
Sbjct: 185 RDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEI--G 242

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWE 378
               L              E + +   L+T+   +      + L L       +P +IW+
Sbjct: 243 KLQNL-------------EELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQ 289

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  L L+ N +  LP E+    +LQ+LIL+RN++K  P  I   L  L  L L NN 
Sbjct: 290 LQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEI-GKLQKLKWLILANNQ 348

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P +    +  L+ L L  N + +LP+      L  L+ L L   QLR  P +I +L
Sbjct: 349 LTVLPQE-IGQLEKLEDLYLEDNQLTTLPKE--IWKLEKLKYLDLANNQLRLLPEEIGKL 405

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           Q+L  LDLS N L+ +P+    L  L  LDLS+N ++ LP E+
Sbjct: 406 QKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEI 448



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 232/476 (48%), Gaps = 57/476 (11%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++ D A +       +D++ L L  + +  L +++  L  L  LN+ +N+L+ LP 
Sbjct: 24  NKVYRDLDAALKN-----PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPN 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG+L  L+ L +  N +  +P E+G+   L + +  +NQL  LP+ +G+  NL      
Sbjct: 79  EIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLH 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG- 204
           NN + SLP+++    K+ +L + GN+L  L    I +   L EL  S++ L   PE IG 
Sbjct: 139 NNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQE-IGTLQDLEELHLSRDQLKTFPEEIGK 197

Query: 205 --SLSRLI--------------------RLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
             SL RLI                    RL L  N++ ++P+ I    +L E  + NN L
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G L  L  L L+SNQ +    +  QL+ L  L L++N L+ LP EIG++  L+
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQ 317

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK- 360
            L+L  N L++L   +  G     LK+L                  L  +   +    K 
Sbjct: 318 SLILARNQLKSLPKEI--GKLQK-LKWL------------ILANNQLTVLPQEIGQLEKL 362

Query: 361 -ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
            +L LE   L+ +P EIW+  ++  LDL+ N ++ LP E+     L+ L LS N+++  P
Sbjct: 363 EDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLP 422

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
             I   L  L  L L NN L  +P +  K +  L+ LDLS N        PF++ P
Sbjct: 423 QKI-GKLEKLKYLDLSNNQLATLPKEIGK-LEKLEDLDLSGN--------PFTTFP 468



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 19/304 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L+ +P E+ K                L++L L  N +  L +++  L  L  
Sbjct: 134 ALNLHNNRLKSLPKEIGK-------------LQKLERLYLGGNQLRTLPQEIGTLQDLEE 180

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S ++L   P  IG+L  LK L +  N ++ +  EIG   +L +    +NQL  LP+ 
Sbjct: 181 LHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNE 240

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELI 190
           +G+  NL +   SNN + +LP+++     +  L +  N+   L   +   W +  L +L 
Sbjct: 241 IGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQI---WQLQNLQDLH 297

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + N L  +P+ IG L  L  L L +N++ S+P  I     L    + NN L+ LP E+G
Sbjct: 298 LAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIG 357

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L KL  L L  NQL     E  +L +L  LDL+NN L  LP EIGK+  L  L L+ N 
Sbjct: 358 QLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQ 417

Query: 310 LRTL 313
           LR L
Sbjct: 418 LRLL 421



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 131/304 (43%), Gaps = 65/304 (21%)

Query: 13  SLNLSNRSLRDVPNEV-----------YKN-FDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
            LNLSN  L  +P E+           Y N F    +  + W+  +LQ L LA       
Sbjct: 249 ELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPK--QIWQLQNLQDLHLA------- 299

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
                           HN+L+ LP  IG+L  L+SL ++ N +  +P EIG    L    
Sbjct: 300 ----------------HNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLI 343

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            ++NQL  LP  +G+   L D    +N +T+LP+++    K+  LD+  N+L +L     
Sbjct: 344 LANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLL----- 398

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                              PE IG L +L  LDL  N++  +P  I     L    + NN
Sbjct: 399 -------------------PEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNN 439

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+ LP E+GKL KL  LDL  N    +  E   L+   +    N    +P  + +  T+
Sbjct: 440 QLATLPKEIGKLEKLEDLDLSGNPFTTFPKEIVGLKHLKILKLKN----IPALLSERETI 495

Query: 301 RKLL 304
           RKLL
Sbjct: 496 RKLL 499


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 217/445 (48%), Gaps = 48/445 (10%)

Query: 10  TSGSLNLSNRSLR----DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           T G L L N S +    +V  E Y++  +A         +D++ LIL+   +  L ++++
Sbjct: 14  TIGLLFLINLSCKIQAEEVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIK 68

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L +L++ HN+L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +
Sbjct: 69  QLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK 128

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L  LP  +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     
Sbjct: 129 LTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKN 187

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ L
Sbjct: 188 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 247

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L++L 
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLD 307

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L TL         P  +  L++                            +EL L
Sbjct: 308 LHQNQLTTL---------PKEIGQLQN---------------------------LQELCL 331

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L+ +P EI +   +  LDL  N +  LP E+    +LQ L L  N++  +P  I  
Sbjct: 332 DENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI-R 390

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKD 449
            L +L  L L  NPL      GF+D
Sbjct: 391 QLKNLQELHLYLNPLSSKEKKGFED 415



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 178/354 (50%), Gaps = 19/354 (5%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L E  +  N+L+ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL         P  +  L++    + +S   TT    I     L    +EL L   
Sbjct: 173 NRLATL---------PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL----QELDLHRN 219

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   +  L+L    +  LP E+    +L+TL L  N++   P  I   L 
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQ 278

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L  L L  N +  +P +    +  LQ LDL  N + +LP+      L +LQEL L   Q
Sbjct: 279 NLEILVLRENRITALPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQ 335

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +LQ LR+LDL  N L ++P+    L +L EL L +N ++  P E+
Sbjct: 336 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N +   P  +   L +L  L L++  L  +P +    +  LQ LDLS+N + +LP+
Sbjct: 100 DLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPK 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+  + L +L ELD
Sbjct: 158 E--VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 215

Query: 528 LSDNNISALPPEL 540
           L  N ++ LP E+
Sbjct: 216 LHRNQLTTLPKEI 228


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 243/493 (49%), Gaps = 43/493 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   + ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L N  I     L  L    N L  +P+ IG L  L +L+L+ N+   +P 
Sbjct: 166 LYLGNNQLTALPNE-IGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            +    +L E Y+G+N L+ LP E+G+L  L  L+L  NQ K    E  QL+ L  L+L 
Sbjct: 225 EVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLG 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP EIG++  L+ L L  N L  L + +        L+ L+S            
Sbjct: 285 YNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEI------GQLQNLQS------------ 326

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                             L L    L+A+P+EI +  ++ +L LS N +  LP E+    
Sbjct: 327 ------------------LYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQ 368

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           +LQ L L  N++   P+ I   L +L  L L +N L  +  D  + +  L+ LDL  N +
Sbjct: 369 NLQELYLGSNQLTILPNEI-GQLKNLQTLYLRSNRLTTLSKD-IEQLQNLKSLDLWNNQL 426

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
            + P+      L +LQ L L   QL   P +I +L+ L++ +L+ N L ++P+    L +
Sbjct: 427 TTFPK--EIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQN 484

Query: 523 LTELDLSDNNISA 535
           L EL L DN +S+
Sbjct: 485 LQELYLIDNQLSS 497



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 208/424 (49%), Gaps = 20/424 (4%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S+N+ K LP  +G+  NL +   + N +T LP+++     + KL++  N+ T+L   
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L EL    N L  +P  IG L  L  L+L  N+  +IP  I    +L   Y+G
Sbjct: 111 -VEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLG 169

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           NN L+ALP E+G++  L  L L SN+L     E  QL+ L  L+L +N  + LP E+ K+
Sbjct: 170 NNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKL 229

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLS 356
             L++L L  N L TL + +        LK LR   L  N+    S     L  + T   
Sbjct: 230 ENLKELYLGSNRLTTLPNEI------GQLKNLRVLELTHNQFKTISKEIGQLKNLQT--- 280

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
                L+L    L+A+P+EI +   +  L L  N +  LP E+    +LQ+L L  N++ 
Sbjct: 281 -----LNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLT 335

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P+ I   L  L  L L  N L  +P++    +  LQ L L  N  ++  N     L +
Sbjct: 336 ALPNEI-GQLQKLQELYLSTNRLTTLPNE-IGQLQNLQELYLGSNQLTILPNE-IGQLKN 392

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ LYLR  +L     DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ L
Sbjct: 393 LQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 452

Query: 537 PPEL 540
           P E+
Sbjct: 453 PKEI 456



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 208/438 (47%), Gaps = 26/438 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  
Sbjct: 73  ELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPN 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL ++HN+   +P  IG+L  L++L +  N +  +P+EIG    L      
Sbjct: 133 EIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLG 192

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SN+L  LP  +G+  NL      +N  T LP+++     + +L +  N+LT L N  I  
Sbjct: 193 SNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNE-IGQ 251

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  + N    + + IG L  L  L+L  N++ ++P+ I    +L   Y+GNN L
Sbjct: 252 LKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQL 311

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP E+G+L  L +L L +NQL     E  QL +L  L LS N L+ LP EIG++  L+
Sbjct: 312 TALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQ 371

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L  N L  L + +        L YLRS       +  +T  +D+  +        K 
Sbjct: 372 ELYLGSNQLTILPNEIGQLKNLQTL-YLRS-------NRLTTLSKDIEQLQ-----NLKS 418

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+  P EI +   +  LDL  N +  LP E+    +LQ   L+ N++   P  
Sbjct: 419 LDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKE 478

Query: 422 ILTSLSSLSCLKLDNNPL 439
           I   L +L  L L +N L
Sbjct: 479 I-GQLQNLQELYLIDNQL 495


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 168/566 (29%), Positives = 271/566 (47%), Gaps = 49/566 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDK--------------WWEAVDLQKL 50
           +K A  SG LNLS + L  VP +V+ N  ++ E +K              WW    L  L
Sbjct: 39  IKQALKSGVLNLSGKGLATVPEKVW-NLSDSDENEKEVRYDLERTNDEESWWNQRSLTSL 97

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L+ N +  + E+++NL  LTVLN+  N L+ LPA IG L  L    V+ N + ++P+  
Sbjct: 98  DLSSNTLTTISENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTELPESF 157

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                L   + S N+  E+  ++   + L     S N I +LP  +    ++ +L +  N
Sbjct: 158 FQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQLTLSNN 217

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            LT L N+ I +   L +L  +KN L  +P  +G L RL    +  N I  +P   +GC 
Sbjct: 218 HLTELPND-IVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELP-DFTGCE 275

Query: 231 SLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
           +L E ++ NN +  LP +  + L +L  LDL  N++++   E   L  L+ LDLSNN++S
Sbjct: 276 ALKELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTIS 335

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTT 344
            LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R     P+      +  
Sbjct: 336 SLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGTGKPDGGQKGVARA 395

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP-----EL 399
                T   + S+ ++         S  P ++++  +   L +   ++ ++P       L
Sbjct: 396 AASASTAVVKNSLFTE---------STFP-DVYQMRKGRALIVCSKALVDIPEAVFLDAL 445

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSS-LSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
            +C  +  + +S+NK+   P  I T LSS L+ L +  N L+ VP+  F     +  L+L
Sbjct: 446 EAC--VYNVDISKNKLTAVPSGI-THLSSLLTELNVSFNLLQTVPA-FFSQFDKISYLNL 501

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI---P 514
           S N +  LPE      L  L+EL +   QL+  P  +  L+ L IL  S N ++ I    
Sbjct: 502 SNNQMTDLPE--VVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATE 559

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
            G   L  L  LDL++NNI  +PP L
Sbjct: 560 SGLGALKRLATLDLANNNIKHVPPVL 585



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 51/305 (16%)

Query: 255 LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L +LDL SN L     E  Q  + L+VL+L +N+L+ LP  IG +T L K  +  N L  
Sbjct: 94  LTSLDLSSNTLTTIS-ENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTE 152

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMAT---------------RLS 356
           L  S         LK L+   L  NE +E +    DLI + T                  
Sbjct: 153 LPESFFQ------LKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFL 206

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L+L   +L+ +P++I    ++ KLDL++N +++LPP +     L+   +  N I 
Sbjct: 207 VRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDID 266

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
           + PD   T   +L  L + NN ++ +P D  +++P L++LDL  N               
Sbjct: 267 ELPD--FTGCEALKELHISNNYIKTLPGDFCENLPQLKVLDLRDN--------------- 309

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
                    ++ + P +I  L  L  LDLS N++ S+P     L  L  L +  N I ++
Sbjct: 310 ---------KIEKLPDEIALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVEGNPIRSI 360

Query: 537 PPELV 541
             +++
Sbjct: 361 RRDII 365



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +D+  NKLT + + +    ++LTEL  S NLL  +P       ++  L+L  N++  +P 
Sbjct: 452 VDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDLPE 511

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 280
            +    +L E  + +N L  +P  + +L  L  L    NQ++E       L    RL+ L
Sbjct: 512 VVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLATL 571

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           DL+NN++  +PP +G +  +  L L GN  R  R  ++   T +++ YLR R+P+
Sbjct: 572 DLANNNIKHVPPVLGTLKNITTLELIGNSFRQPRHQILEKGTESIMSYLRDRIPQ 626



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 14/195 (7%)

Query: 356 SVTSKELSLEGMNLSAIPSEIW------EAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           ++ S  L+L G  L+ +P ++W      E  +  + DL R + +E      +  SL +L 
Sbjct: 42  ALKSGVLNLSGKGLATVPEKVWNLSDSDENEKEVRYDLERTNDEE---SWWNQRSLTSLD 98

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           LS N +    + I  +L  L+ L L +N L  +P+ G   +  L    ++ N +  LPE+
Sbjct: 99  LSSNTLTTISENI-QNLVDLTVLNLQDNALTSLPA-GIGALTKLTKFSVARNKLTELPES 156

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
             F  L  L+ L L   +  E   +I  L  L  LD+S NS+ ++P G   L  L +L L
Sbjct: 157 --FFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQLTL 214

Query: 529 SDNNISALPPELVSV 543
           S+N+++ LP ++V++
Sbjct: 215 SNNHLTELPNDIVNL 229



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           ++ LN+S+N++++LP  +G L  L+ L+V  N + +IPD +     L     S NQ++E+
Sbjct: 496 ISYLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEI 555

Query: 130 ---PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
               S LG    L+    +NN I  +P  L     ++ L++ GN  
Sbjct: 556 DATESGLGALKRLATLDLANNNIKHVPPVLGTLKNITTLELIGNSF 601


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 240/515 (46%), Gaps = 25/515 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN       
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLN 345

Query: 344 TKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEITKLD 386
             ++       LS+  K+ S            L G+NL     S +P EI     +  L 
Sbjct: 346 LAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLA 405

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++ 
Sbjct: 406 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE- 463

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ LDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL 521

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 154/454 (33%), Positives = 222/454 (48%), Gaps = 24/454 (5%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S N ++ +P+EIG    L K +  +NQL  L   +G    L      NN + SL
Sbjct: 40  VRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLESL 99

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  +    K+  L++E N+L VL    I +   L  L    N L  +P+ IG L +L +L
Sbjct: 100 PNKIGKLRKLEHLNLENNQLAVLVQE-IGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKL 158

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL  N++ ++P+ I    SL    + NN L  LP E+ KL KL  L L  NQ +    E 
Sbjct: 159 DLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEI 218

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  LD+SNN L  LP EI K+  L+ L L  N L  L         P  +  L  
Sbjct: 219 DQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVL---------PQEIGQL-- 267

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              EN DS   +  + L T+   +    K   L+L    L  +P EI    E+  L+L  
Sbjct: 268 ---ENLDSLILSNNQ-LTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEH 323

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +L+ L LS N++K  P  I   L  L  L L++  L  +P++    
Sbjct: 324 NQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGI-WKLQRLEWLYLEHAHLTTLPNE-IGT 381

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ L LS N + +LP+      L  L+ LYL+  +L   P +I +LQ L  LDLS N
Sbjct: 382 LQKLQRLFLSNNRLKTLPK--EIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNN 439

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            L+++P     L SL +LDLS N  +  P E+V 
Sbjct: 440 QLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEIVG 473



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 221/446 (49%), Gaps = 20/446 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N L  LP  IG+L  L+ L++  N +  +  EIG+   L      +N+L+ LP+
Sbjct: 42  ILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLESLPN 101

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+   L      NN +  L +++    K+  L +E N+LTVL    I     L +L  
Sbjct: 102 KIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQE-IGKLQKLEKLDL 160

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  IG L  L  L L  NR+ ++P  I     L   Y+G+N    LP E+ +
Sbjct: 161 SDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQ 220

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LD+ +NQL     E  +L+ L  L L +N L+ LP EIG++  L  L+L+ N L
Sbjct: 221 LQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQL 280

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +    T   L+YL        +++  T  +++ T+        + L+LE   L+
Sbjct: 281 TTLPQEI---GTLQKLQYLNL-----SNNQLRTLPQEIGTLQEL-----EWLNLEHNQLA 327

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           A+P EI +   +  L+LS N ++ LP  +     L+ L L    +   P+ I T L  L 
Sbjct: 328 ALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGT-LQKLQ 386

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L NN L+ +P + +K +  L+ L L  N + SLP+      L +L+ L L   QLR 
Sbjct: 387 RLFLSNNRLKTLPKEIWK-LRKLEWLYLKNNKLGSLPK--EIDQLQNLEYLDLSNNQLRT 443

Query: 490 APTDILRLQQLRILDLSQNSLQSIPE 515
            P +I +LQ L  LDLS N   + P+
Sbjct: 444 LPNEIGQLQSLEDLDLSGNPFTTFPQ 469



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 198/431 (45%), Gaps = 48/431 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N +E L   +  L  L  LN+ +N+L+ L   IG L  L+ L +  N +  +
Sbjct: 86  LEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVL 145

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L K D S NQL  LP+ +G+  +L      NN + +LP+++    K+ +L 
Sbjct: 146 PQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLY 205

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+   L    I     L +L  S N L  +P  I  L  L  L L  N++  +P  I
Sbjct: 206 LGDNQFRTLPKE-IDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEI 264

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    + NN L+ LP E+G L KL  L+L +NQL+    E   L+ L  L+L +N
Sbjct: 265 GQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHN 324

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EI ++  L  L L+ N L+TL                                
Sbjct: 325 QLAALPQEIDQLQNLEDLNLSNNRLKTLPKG----------------------------- 355

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I    RL      L LE  +L+ +P+EI    ++ +L LS N ++ LP E+     L
Sbjct: 356 ---IWKLQRLEW----LYLEHAHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKL 408

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           + L L  NK+   P  I   L +L  L L NN LR +P++    +  L+ LDLS N    
Sbjct: 409 EWLYLKNNKLGSLPKEI-DQLQNLEYLDLSNNQLRTLPNE-IGQLQSLEDLDLSGN---- 462

Query: 466 PENPPFSSLPH 476
               PF++ P 
Sbjct: 463 ----PFTTFPQ 469



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 192/435 (44%), Gaps = 56/435 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +PN++ K                L+ L L +N +  L +++  L  L  L
Sbjct: 89  LSLKNNRLESLPNKIGK-------------LRKLEHLNLENNQLAVLVQEIGTLQKLEWL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ LD+S N +  +P+EIG   +L      +N+LK LP  +
Sbjct: 136 SLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIA 191
            +   L      +N   +LP+++     +  LDV  N+L  L N +   W +  L  L  
Sbjct: 196 WKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEI---WKLQNLKWLYL 252

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  L L  N++ ++P  I     L    + NN L  LP E+G 
Sbjct: 253 DDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGT 312

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L +L  L+L  NQL     E  QL+ L  L+LSNN L  LP  I K+  L  L L    L
Sbjct: 313 LQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHL 372

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL + +  G    L                                  + L L    L 
Sbjct: 373 TTLPNEI--GTLQKL----------------------------------QRLFLSNNRLK 396

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EIW+  ++  L L  N +  LP E+    +L+ L LS N+++  P+ I   L SL 
Sbjct: 397 TLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEI-GQLQSLE 455

Query: 431 CLKLDNNPLRQVPSD 445
            L L  NP    P +
Sbjct: 456 DLDLSGNPFTTFPQE 470



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 140/305 (45%), Gaps = 59/305 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++SN  L  +PNE+             W+  +L+ L L  N +  L +++  L  L  L
Sbjct: 227 LDVSNNQLVTLPNEI-------------WKLQNLKWLYLDDNQLTVLPQEIGQLENLDSL 273

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S+N+L+ LP  IG L  L+ L++S N +  +P EIG+   L   +   NQL  LP  +
Sbjct: 274 ILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEI 333

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  NL D   SNN + +LP+ +    ++  L +E   LT L                  
Sbjct: 334 DQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTL------------------ 375

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P  IG+L +L RL L  NR+ ++P  I     L   Y+ NN L +LP E+ +L 
Sbjct: 376 ------PNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQ 429

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L           EY           LDLSNN L  LP EIG++ +L  L L+GNP  T 
Sbjct: 430 NL-----------EY-----------LDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTF 467

Query: 314 RSSLV 318
              +V
Sbjct: 468 PQEIV 472


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 171/564 (30%), Positives = 273/564 (48%), Gaps = 52/564 (9%)

Query: 13  SLNLSNRSLRDVPNEVYK-----NFDEAGEG--DKWWEAVD-LQKLI---LAHNNIEKLK 61
           S+N+SN  LR +P  + K     N  +A         E +D LQ+L+   L+HN ++ + 
Sbjct: 184 SVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIP 243

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +  L  L  L++SHN+L  LP  I  L H L +L  S N + ++PD+I +   +   D
Sbjct: 244 PTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLD 303

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N+L  LP+  G+  ++     S+N ++SL E LA   K+  L+   N LT L    +
Sbjct: 304 LSENKLTSLPAKFGKTDSVVSLDLSHNQLSSL-ERLAGLGKLESLNASYNVLTSLPEG-V 361

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            S   L  L  + N +  MP  IG L  L  +D+  N++ ++P ++     L+     +N
Sbjct: 362 GSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHN 421

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
           AL+ALP  + KL  L  LD+  N+L+        LR LS LD+S+N L    P +    +
Sbjct: 422 ALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKL----PVLTAPRS 477

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL---- 355
           L  L + GNPLR    + V G   +L+  +   L     +E   +  +L T+ T +    
Sbjct: 478 LTCLKVAGNPLRL--PTRVAGDNKSLIVRIGDDL--RSLTELDISNIELTTLPTTICNLR 533

Query: 356 -------------SVTS--------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                        S+ +        + L L    L+A+P ++ +   ++ LD S N ++E
Sbjct: 534 FLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEE 593

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
             P L    SLQ L  S NK+   PD   T LS L+ L L  N L ++P+D    +  L 
Sbjct: 594 FMPSLVKLRSLQYLNFSNNKLTSLPDNFGT-LSQLTTLDLSANQLPELPNDRIDILASLL 652

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           +L+ S N + ++P + P+  L  +Q L L    ++  P DI R++ L  LDLS N L+ I
Sbjct: 653 VLNASGNQVTAIPMDMPY--LYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLEGI 710

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    L S+  +D+S+N + + P
Sbjct: 711 PETITKLPSIKSVDISNNKLRSFP 734



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 275/571 (48%), Gaps = 55/571 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +N S  +++ +P EVY+N +E     K+ +A         +N + ++ + +  L  L  L
Sbjct: 45  MNFSTCNMKALPEEVYEN-EELAMKTKYLDA--------QNNRLRRVPKGIGRLESLRSL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +V++N +  +P ++  L  L S++ S N I  +P  I  A+AL   + + N+LK LP ++
Sbjct: 96  DVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKNI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI-AS 192
           G   +++   AS+N I +LP+ +      S ++V  N+L  L   +IA  T    +I AS
Sbjct: 156 GSSSSITYIDASSNSIKTLPKSIYKLH--SSVNVSNNQLRTLP-AVIAKGTCSINVIDAS 212

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +NL++ +PE +  L RL+ L+L  N++  IP +I     L    + +N L  LP ++  L
Sbjct: 213 RNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNL 272

Query: 253 SK-LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              L TL    N+L +   +   LR + VLDLS N L+ LP + GK  ++  L L+ N L
Sbjct: 273 RHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQL 332

Query: 311 RTLRSSLVNGPTPAL-LKY-LRSRLPENEDSEAS-----TTKEDLITMATRLSVTS--KE 361
            +L      G   +L   Y + + LPE   S  S         ++  M  ++      K 
Sbjct: 333 SSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKN 392

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD- 420
           + +    L  +P  + +   +++L+ S N++  LP  +    +L  L +SRNK++  P+ 
Sbjct: 393 VDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEP 452

Query: 421 -----------------AILTSLSSLSCLKLDNNPLR---QVPSDG-------FKDIPML 453
                             +LT+  SL+CLK+  NPLR   +V  D          D+  L
Sbjct: 453 FHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSL 512

Query: 454 QILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
             LD+S   + +LP      +L  L++   R  +L   P +  RL+QL+ LDL+ N L +
Sbjct: 513 TELDISNIELTTLPTT--ICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTA 570

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +P    +   L+ LD S+N +    P LV +
Sbjct: 571 LPPKLGDFAYLSHLDTSNNQVEEFMPSLVKL 601



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 203/427 (47%), Gaps = 42/427 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L  ++N +  L E + +L  L VL+++HN++ E+PA IG L  LK++DVS N +  +
Sbjct: 344 LESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETL 403

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G    L + + S N L  LP+++ +   L     S N + +LPE       +S LD
Sbjct: 404 PDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLD 463

Query: 167 VEGNKLTVLS-------------------------NNLIA----SWTMLTELIASKNLLN 197
           V  NKL VL+                          +LI         LTEL  S   L 
Sbjct: 464 VSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELT 523

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P TI +L  L + +   N++ S+P++      L    + +N L+ALP +LG  + L  
Sbjct: 524 TLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSH 583

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LD  +NQ++E+     +LR L  L+ SNN L+ LP   G ++ L  L L+ N L  L + 
Sbjct: 584 LDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPND 643

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
            ++         L S L  N    AS  +   I M        + L+L    + A+P +I
Sbjct: 644 RID--------ILASLLVLN----ASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDI 691

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +T LDLS N ++ +P  ++   S++++ +S NK++ +P  +       S    D 
Sbjct: 692 WRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRSFPKTMERLRQKASVNTSDQ 751

Query: 437 NPLRQVP 443
           +P ++ P
Sbjct: 752 DPNKKEP 758


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 236/485 (48%), Gaps = 45/485 (9%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E L+N   + +L +S N+L+ LP  IG+L  L+ L++S N +  +P+EIG    L + D 
Sbjct: 32  EALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDL 91

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L   P+ + R   L     ++N + +LP+++    K+  L ++ N L  L      
Sbjct: 92  FHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATL------ 145

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P  IG L RL RL L+ N ++++P  I    +L + Y+ +N 
Sbjct: 146 ------------------PSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQ 187

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ LP E+G+L  L  LD+ +N L     E  +LR L  L+LSNN L  LP EIGK+  L
Sbjct: 188 LTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNL 247

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L L+ N L TL   +              +L E E       +  LIT+   +    K
Sbjct: 248 EELNLSNNQLITLPQEI-------------GQLQELEWLHLEHNQ--LITLPQEIGTLQK 292

Query: 361 --ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L L+  +L  +P+EI +   + +L L  N +  LP E+ +  +L +L +S N +   
Sbjct: 293 LEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTL 352

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P+ I   L SL  L L+NN L  +P +  K   +  +   +  +A+LP       L +LQ
Sbjct: 353 PNEI-GKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPN--EIGQLENLQ 409

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   QL+  P +I +L+ L+ L+L  N L+++P     L +L  L+L  N +  LP 
Sbjct: 410 YLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQ 469

Query: 539 ELVSV 543
           E+V +
Sbjct: 470 EIVGL 474



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 148/437 (33%), Positives = 209/437 (47%), Gaps = 28/437 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWW--------EAVDLQKL---ILAHNNIEKLKE 62
           LNLSN  L  +PNE+ +      E D +         E V LQ+L    LA N +  L +
Sbjct: 66  LNLSNNRLTTLPNEIGR-LQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPK 124

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N L+ LP+ IG L  LK L +  N +M +P EIG    L +    
Sbjct: 125 EIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLE 184

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL D   SNN +T+LP ++     + +L++  N L  L N  I  
Sbjct: 185 DNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE-IGK 243

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL  S N L  +P+ IG L  L  L L  N+++++P  I     L   Y+ NN L
Sbjct: 244 LQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHL 303

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+GKL  L  L L  NQL     E   L+ L  LD+SNN L  LP EIGK+ +L+
Sbjct: 304 ETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLK 363

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L  N L TL         P  +  L++    N  +    T  + I     L      
Sbjct: 364 RLNLENNQLTTL---------PKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQY---- 410

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+LE   L  +P+EI +   +  L+L  N ++ LP E+    +L+ L L  N++   P  
Sbjct: 411 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQE 470

Query: 422 ILTSLSSLSCLKLDNNP 438
           I+  L  L  LKL N P
Sbjct: 471 IV-GLKHLQILKLKNIP 486



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 242/487 (49%), Gaps = 52/487 (10%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +       +D++ L L+ N +  L  ++  L  L  LN+S+N+L+ LP 
Sbjct: 24  NKVYRDFNEALKN-----PMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPN 78

Query: 86  AIGELHMLKSLDV------SF-----------------NSIMKIPDEIGSATALVKFDCS 122
            IG L  L+ LD+      +F                 N ++ +P EIG+   L      
Sbjct: 79  EIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLK 138

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N L  LPS +GR   L      NN + +LP+++     + +L +E N+LT L    I  
Sbjct: 139 NNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE-IGQ 197

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L  S N L  +P  IG L  L RL+L  N ++++P+ I    +L E  + NN L
Sbjct: 198 LENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L +L  L L  NQL     E   L +L  L L NN L  LP EIGK+ +L+
Sbjct: 258 ITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLK 317

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTS 359
           +L L  N L TL         P  +  L++ LP         +   L+T+   +   ++ 
Sbjct: 318 RLHLEHNQLITL---------PQEIGTLQN-LP-----SLDVSNNHLVTLPNEIGKLLSL 362

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K L+LE   L+ +P EI +   +  L+LS N +  LP E+    +LQ L L  N++K  P
Sbjct: 363 KRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLP 422

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + I   L +L  L L+NN L+ +P++    +  L++L+L  N + +LP+      L HLQ
Sbjct: 423 NEI-GQLENLQYLNLENNQLKTLPNE-IGRLQNLKVLNLGGNQLVTLPQ--EIVGLKHLQ 478

Query: 479 ELYLRRM 485
            L L+ +
Sbjct: 479 ILKLKNI 485



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 27/386 (6%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           +  K D E NK+    N  + +   +  L  S N L  +P  IG L +L  L+L  NR+ 
Sbjct: 15  RFCKRDAEKNKVYRDFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLT 74

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           ++P+ I    +L E  + +N L+  P E+ +L +L  L L  NQL     E   L +L  
Sbjct: 75  TLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQH 134

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENED 338
           L L NN L+ LP EIG++  L++L L  N L TL   +  G    L + YL       ED
Sbjct: 135 LYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI--GKLQNLEQLYL-------ED 185

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           ++ +T  +++  +        ++L +   +L+ +P+EI +   + +L+LS N +  LP E
Sbjct: 186 NQLTTLPQEIGQLE-----NLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE 240

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +    +L+ L LS N++   P  I   L  L  L L++N L  +P    ++I  LQ L+ 
Sbjct: 241 IGKLQNLEELNLSNNQLITLPQEI-GQLQELEWLHLEHNQLITLP----QEIGTLQKLEY 295

Query: 459 SY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
            Y    ++ +LP       L  L+ L+L   QL   P +I  LQ L  LD+S N L ++P
Sbjct: 296 LYLKNNHLETLPN--EIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLP 353

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
                L SL  L+L +N ++ LP E+
Sbjct: 354 NEIGKLLSLKRLNLENNQLTTLPKEI 379



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 145/307 (47%), Gaps = 40/307 (13%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGD--------KWWEAVDLQKLILAHNNIE 58
           R+   LNLSN  L  +PNE+ K  N +E    +        +  +  +L+ L L HN + 
Sbjct: 222 RSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLI 281

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L + +N L  LP  IG+L  LK L +  N ++ +P EIG+   L  
Sbjct: 282 TLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPS 341

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S+N L  LP+ +G+ L+L      NN +T+LP+++     +  L++  N+L  L   
Sbjct: 342 LDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATL--- 398

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P  IG L  L  L+L  N++ ++P+ I    +L    + 
Sbjct: 399 ---------------------PNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLE 437

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           NN L  LP E+G+L  L  L+L  NQL     E   L+ L +L L N     +P  + + 
Sbjct: 438 NNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKN-----IPALLSEK 492

Query: 298 TTLRKLL 304
            T+RKLL
Sbjct: 493 ETIRKLL 499


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 212/437 (48%), Gaps = 61/437 (13%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D SSNQL  LP  +G   NL D   ++N  T+LP+++ +  K+ KL
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKL 186

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L                        PE IG L +L  L L  N+  ++P  
Sbjct: 187 SLGRNQLTTL------------------------PEEIGKLQKLKELHLDGNQFTTLPKE 222

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L E ++G+N  + LP E+ KL  L  L+L SN+      E   L +L  L L++
Sbjct: 223 IGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAH 282

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+ +L++L L GN L TL         P  +  L+S             
Sbjct: 283 NQLTTLPKEIGKLQSLQRLTLWGNQLTTL---------PKEIGKLQSL------------ 321

Query: 345 KEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            ++LI    +L+   KE         L+L G  L+ +P EI +   + +L L +N +  +
Sbjct: 322 -QELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTI 380

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+     LQ L LS N++   P  I   L +L  L L NN L  +P +   ++  LQ 
Sbjct: 381 PKEIWQLQYLQRLSLSFNQLTAIPKEI-EKLQNLQKLHLRNNQLTTLPKE-IGNLQKLQE 438

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDL YN + +LPE      L +L++LYL   +L   P +I +LQ+L+ L L+ N L ++P
Sbjct: 439 LDLGYNQLTALPEE--IGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLP 496

Query: 515 EGFKNLTSLTELDLSDN 531
           +  + L  L  L L+DN
Sbjct: 497 KEIEKLQKLKNLHLADN 513



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 219/489 (44%), Gaps = 76/489 (15%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA-------HNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           VY N  EA +        D+Q L L        ++ +  L +++  L  L  L++S N+L
Sbjct: 93  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           + LP  IG L  L+ L+++ N    +P EI +   L K     NQL  LP  +G+   L 
Sbjct: 148 TTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLK 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           +     N  T+LP+++    K+ +L +  N+ T L    I     L  L    N    +P
Sbjct: 208 ELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKE-IKKLQNLQWLNLDSNRFTTLP 266

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG+L +L +L L  N++ ++P  I    SL    +  N L+ LP E+GKL  L  L L
Sbjct: 267 KEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELIL 326

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQL     E  +L+ L  L L  N L+ LP EIGK+ +L++L+L  N L T+   +  
Sbjct: 327 GKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQ 386

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 L+YL+                               LSL    L+AIP EI + 
Sbjct: 387 ------LQYLQ------------------------------RLSLSFNQLTAIPKEIEKL 410

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             + KL L  N +  LP E+ +   LQ L L  N++   P+ I   L +L  L L+NN L
Sbjct: 411 QNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEI-GKLQNLKDLYLNNNKL 469

Query: 440 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
             +P    K+I  LQ                      L++LYL   +L   P +I +LQ+
Sbjct: 470 TTLP----KEIGKLQ---------------------KLKDLYLNNNKLTTLPKEIEKLQK 504

Query: 500 LRILDLSQN 508
           L+ L L+ N
Sbjct: 505 LKNLHLADN 513



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 203/421 (48%), Gaps = 66/421 (15%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S++ L  LP  +G+  NL D   S+N +T+LP+++ +   +  L++  N+ T L      
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTL------ 173

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ I +L +L +L L +N++ ++P  I     L E ++  N 
Sbjct: 174 ------------------PKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQ 215

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
            + LP E+GKL KL  L L SN+      E  +L+ L  L+L +N  + LP EIG +  L
Sbjct: 216 FTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKL 275

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           +KL L  N L TL         P  +  L+S                            +
Sbjct: 276 QKLSLAHNQLTTL---------PKEIGKLQSL---------------------------Q 299

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L+L G  L+ +P EI +   + +L L +N +  +P E+    SLQ+L L  N++   P 
Sbjct: 300 RLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPK 359

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            I   L SL  L L  N L  +P + ++ +  LQ L LS+N + ++P+      L +LQ+
Sbjct: 360 EI-GKLQSLQELILGKNQLTTIPKEIWQ-LQYLQRLSLSFNQLTAIPKE--IEKLQNLQK 415

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L+LR  QL   P +I  LQ+L+ LDL  N L ++PE    L +L +L L++N ++ LP E
Sbjct: 416 LHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKE 475

Query: 540 L 540
           +
Sbjct: 476 I 476



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 178/395 (45%), Gaps = 39/395 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++ NL  L  L++  N+L+ LP  IG+L  LK L +  N    
Sbjct: 159 NLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTT 218

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L +    SN+   LP  + +  NL      +N  T+LP+++ +  K+ KL
Sbjct: 219 LPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKL 278

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L  L    N L  +P+ IG L  L  L L +N++ +IP  
Sbjct: 279 SLAHNQLTTLPKE-IGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKE 337

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  N L+ LP E+GKL  L  L L  NQL     E  QL+ L  L LS 
Sbjct: 338 IGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSF 397

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EI K+  L+KL L  N L TL   + N      L+ L+              
Sbjct: 398 NQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGN------LQKLQ-------------- 437

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                           EL L    L+A+P EI +   +  L L+ N +  LP E+     
Sbjct: 438 ----------------ELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQK 481

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+ L L+ NK+   P  I   L  L  L L +NP 
Sbjct: 482 LKDLYLNNNKLTTLPKEI-EKLQKLKNLHLADNPF 515



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 177/401 (44%), Gaps = 51/401 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL++     +P E+             W    LQKL L  N +  L E++  L  L  L
Sbjct: 163 LNLNSNQFTTLPKEI-------------WNLQKLQKLSLGRNQLTTLPEEIGKLQKLKEL 209

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+ + LP  IG+L  LK L +  N    +P EI     L   +  SN+   LP  +
Sbjct: 210 HLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEI 269

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L     ++N +T+LP+++     + +L + GN+LT L    I     L ELI  K
Sbjct: 270 GNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKE-IGKLQSLQELILGK 328

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L L  N++ ++P  I    SL E  +G N L+ +P E+ +L 
Sbjct: 329 NQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQ 388

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  +L+ L  L L NN L+ LP EIG +  L++L L  N L  
Sbjct: 389 YLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQL-- 446

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                             + LPE             I     L    K+L L    L+ +
Sbjct: 447 ------------------TALPEE------------IGKLQNL----KDLYLNNNKLTTL 472

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           P EI +  ++  L L+ N +  LP E+     L+ L L+ N
Sbjct: 473 PKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADN 513


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 250/491 (50%), Gaps = 38/491 (7%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL------------------DVSFNSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL                   VS N++  +P E+    
Sbjct: 21  LDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLKTLPLELLGLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       +T +P+ +A+ + +++L +  N++T 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQ 140

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           +    IA  + LT LI S N +  +PE I +L+ L RL+L  N+I  IP  I+   +L  
Sbjct: 141 IPE-AIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTL 199

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPE 293
            Y+  N ++ +P  + +L+ L  LDL  N++ E      Q   L+VLDLS+N ++ +P  
Sbjct: 200 LYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEA 259

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I ++T L+ L L+ N +  +  +L N     L   ++  L  N+ +E      +L  +  
Sbjct: 260 IAQLTNLKLLYLSDNQITEIPEALAN-----LTNLMQLHLSSNQITEIPEALANLTNLT- 313

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                  +L L G  ++ IP  +     +T+L L  N I E+P  L++  +L  L+L  N
Sbjct: 314 -------QLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSN 366

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           +I + P+  L +L++L  L L +N + ++P +    +  L  LDL +N I  +P+    +
Sbjct: 367 QIAEIPET-LANLTNLIQLVLFSNQIAEIP-ETLAKLTNLTRLDLRFNQITQIPK--VIA 422

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L +L EL+L   Q+ + P  +  L  L  L  S N +  IP     LT+LT+LDLS N 
Sbjct: 423 NLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQ 482

Query: 533 ISALPPELVSV 543
           I+ +P  + S+
Sbjct: 483 ITEIPEAIESL 493



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 245/496 (49%), Gaps = 50/496 (10%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           GD + E V       + NN++ L  +L  LP L  L++S N L  +P  + ++  L+ L 
Sbjct: 57  GDHFLEKV-------SGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELI 109

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +    + +IPD I + T L +   S NQ+ ++P ++ +  NL+    S+N IT +PE +A
Sbjct: 110 LIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIA 169

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + + +++L++  N++T +   +IA  T LT L  S N +  +PE I  L+ L  LDL  N
Sbjct: 170 NLTNLTRLNLSSNQITQIP-EVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDN 228

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           +I  IP +I+   +L    + +N ++ +P  + +L+ L  L L  NQ+ E       L  
Sbjct: 229 KITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTN 288

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L LS+N ++ +P  +  +T L +L L+GN +  +  +L N P               
Sbjct: 289 LMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPN-------------- 334

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                           TRL + S +       ++ IP  +     + +L L  N I E+P
Sbjct: 335 ---------------LTRLYLYSNQ-------ITEIPEALANLTNLIQLVLFSNQIAEIP 372

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             L++  +L  L+L  N+I + P+  L  L++L+ L L  N + Q+P     ++  L  L
Sbjct: 373 ETLANLTNLIQLVLFSNQIAEIPET-LAKLTNLTRLDLRFNQITQIPK-VIANLTNLTEL 430

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            LS N I  +PE    ++L +L +LY    Q+ + P  I +L  L  LDLS N +  IPE
Sbjct: 431 HLSSNQITQIPE--ALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPE 488

Query: 516 GFKNLTSLTELDLSDN 531
             ++L+ L +LDL  N
Sbjct: 489 AIESLSKLEKLDLRGN 504



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 201/395 (50%), Gaps = 16/395 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +LIL++N I ++ E +  L  LTVL  S NK++++P AI  L  L  L++S N I +
Sbjct: 127 NLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQ 186

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I   T L     S NQ+ E+P ++ +  NL+    S+N IT +PE +   + ++ L
Sbjct: 187 IPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVL 246

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++T +    IA  T L  L  S N +  +PE + +L+ L++L L  N+I  IP +
Sbjct: 247 DLSSNQITKIP-EAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEA 305

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L + Y+  N ++ +P  L  L  L  L L+SNQ+ E       L  L  L L +
Sbjct: 306 LANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFS 365

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P  +  +T L +L+L  N +  +  +L       L    R  L  N+ ++    
Sbjct: 366 NQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAK-----LTNLTRLDLRFNQITQIPKV 420

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             +L  +         EL L    ++ IP  +     +T+L  S N I ++P  ++   +
Sbjct: 421 IANLTNLT--------ELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTN 472

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L  L LS N+I + P+AI  SLS L  L L  NPL
Sbjct: 473 LTQLDLSGNQITEIPEAI-ESLSKLEKLDLRGNPL 506



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 197/381 (51%), Gaps = 38/381 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L+ N I ++ E +  L  LT+L +S N+++E+P AI +L  L  LD+S N I +
Sbjct: 173 NLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITE 232

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I  +T L   D SSNQ+ ++P ++ +  NL     S+N IT +PE LA+ + + +L
Sbjct: 233 IPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQL 292

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++T +   L A+ T LT+L  S N +  +PE + +L  L RL L+ N+I  IP +
Sbjct: 293 HLSSNQITEIPEAL-ANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEA 351

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L +  + +N ++ +P  L  L+ L  L L SNQ+ E      +L  L+ LDL  
Sbjct: 352 LANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRF 411

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P  I  +T L +L L+ N +  +  +L N                         
Sbjct: 412 NQITQIPKVIANLTNLTELHLSSNQITQIPEALAN------------------------- 446

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +T  T+L  +S +       ++ IP  I +   +T+LDLS N I E+P  + S + 
Sbjct: 447 ----LTNLTQLYFSSNQ-------ITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSK 495

Query: 405 LQTLILSRNKIKDWPDAILTS 425
           L+ L L  N +   P+ + +S
Sbjct: 496 LEKLDLRGNPLPISPEILGSS 516



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 188/418 (44%), Gaps = 73/418 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  +  +P  + K               +L  L L+ N I ++ E +  L  LT+L
Sbjct: 177 LNLSSNQITQIPEVIAK-------------LTNLTLLYLSGNQITEIPEAIAQLTNLTLL 223

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S NK++E+P AI +   L  LD+S N I KIP+ I   T L     S NQ+ E+P +L
Sbjct: 224 DLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEAL 283

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------------------- 173
               NL     S+N IT +PE LA+ + +++L + GN++T                    
Sbjct: 284 ANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSN 343

Query: 174 ------------------VLSNNLI-------ASWTMLTELIASKNLLNGMPETIGSLSR 208
                             VL +N I       A+ T L +L+   N +  +PET+  L+ 
Sbjct: 344 QITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTN 403

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDL  N+I  IP  I+   +L E ++ +N ++ +P  L  L+ L  L   SNQ+ + 
Sbjct: 404 LTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQI 463

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL----RTLRSSLVNGPTP 323
                +L  L+ LDLS N ++ +P  I  ++ L KL L GNPL      L SS   G   
Sbjct: 464 PGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPISPEILGSSDDVGSVE 523

Query: 324 ALLKYLR-----SRLPENED-----SEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            +  YL+        P NE       + S  K  LI    R     K+   +G+N+  
Sbjct: 524 DIFNYLQLLRSGEVRPLNEAKLLLIGQGSVGKTSLIKRLIRNEYDEKQPQTDGLNVET 581



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   +++ Y          V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPVEIGKLQQLESLIL-GKKVEGYERVGDHFLEKV---SGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA- 352
           +  +  LRKL ++GNPL ++   +        L  +R  L E  D+ A+ T    + ++ 
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSY 135

Query: 353 ---TRLSVTSKELS------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              T++     +LS           ++ IP  I     +T+L+LS N I ++P  ++   
Sbjct: 136 NQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLT 195

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           +L  L LS N+I + P+AI   L++L+ L L +N + ++P +       L +LDLS N I
Sbjct: 196 NLTLLYLSGNQITEIPEAI-AQLTNLTLLDLSDNKITEIP-EAITQSTNLTVLDLSSNQI 253

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
             +PE    + L +L+ LYL   Q+ E P  +  L  L  L LS N +  IPE   NLT+
Sbjct: 254 TKIPE--AIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTN 311

Query: 523 LTELDLSDNNISALPPELVSV 543
           LT+L LS N I+ +P  L ++
Sbjct: 312 LTQLYLSGNQITEIPEALANL 332


>gi|440801654|gb|ELR22663.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 936

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 261/563 (46%), Gaps = 63/563 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N++L D+P +                  +L  L L HN IE L  ++ NL  LT+ 
Sbjct: 42  LDLKNQNLTDLPKDFIIE--------------ELTWLSLNHNAIESLPPEIANLTRLTIF 87

Query: 74  NVSHNKLSEL-----------------------PAAIGELHMLKSLDVSFNSIMKIPDEI 110
            +  NKL  L                       P  IG+L +LK L V +N + ++P E+
Sbjct: 88  RLFGNKLKSLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEV 147

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G  TAL   +   N+L  LP  L     L +   ++N  ++LP  +A  S ++ L + GN
Sbjct: 148 GKLTALHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGN 207

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
               + N L  +   L +L    N L  +P  IG+L+ L  L L  N + S+P+ +    
Sbjct: 208 DFKSIGNELSHA-VCLQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLS 266

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 290
            L E  +GNN L+ +P E+ +LS L  LD   NQ+ E       + L  LD+S N+L  L
Sbjct: 267 ELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISELPDLGGLVSLQELDVSFNTLQAL 326

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  +  +T+LR+L    N L +L +S+      + L    +R+ E     A       ++
Sbjct: 327 PEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIAQ------LS 380

Query: 351 MATRLSVTSKELS----------------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
             +RLS ++  +S                L   NL   P  ++EA  + +L+L  N +  
Sbjct: 381 CLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSV 440

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +P ++     LQ L LS NKI+  P+  +  + +L  L + +N   + P   F+   + +
Sbjct: 441 VPDDIGRLTKLQRLYLSCNKIEHLPEQ-MKEMVALKDLYIGSNSFTEFPPVVFELTTLRE 499

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           +   + N + +P  P  S L  L+ L++   +++E P +I  L  L+ LDLS N L ++P
Sbjct: 500 LSLANSNFSVVP--PHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDLSHNCLAALP 557

Query: 515 EGFKNLTSLTELDLSDNNISALP 537
             F  L  L ELD+S N +++LP
Sbjct: 558 AEFTALRRLAELDISHNELTSLP 580



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 246/517 (47%), Gaps = 39/517 (7%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N ++ L  ++  L  LT L++  N LS LP  IG+L +LK L V +N + ++P E+G
Sbjct: 89  LFGNKLKSLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEVG 148

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             TAL   +   N+L  LP  L     L +   ++N  ++LP  +A  S ++ L + GN 
Sbjct: 149 KLTALHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGND 208

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
              + N L  +   L +L    N L  +P  IG+L+ L  L L  N + S+P+ +     
Sbjct: 209 FKSIGNELSHA-VCLQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLSE 267

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
           L E  +GNN L+ +P E+ +LS L  LD   NQ+ E       + L  LD+S N+L  LP
Sbjct: 268 LLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISELPDLGGLVSLQELDVSFNTLQALP 327

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEAS-----TT 344
             +  +T+LR+L    N L +L +S+      + L    +R+ E  +E ++ S     + 
Sbjct: 328 EGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIAQLSCLSRLSA 387

Query: 345 KEDLIT----------------------MATRLSVTSK----ELSLEGMNLSAIPSEIWE 378
             + I+                      M   +SV       +L+L G  LS +P +I  
Sbjct: 388 SANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGR 447

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             ++ +L LS N I+ LP ++    +L+ L +  N   ++P  +   L++L  L L N+ 
Sbjct: 448 LTKLQRLYLSCNKIEHLPEQMKEMVALKDLYIGSNSFTEFPPVVF-ELTTLRELSLANSN 506

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
              VP      +  L++L ++ N I  LP      +L +L+EL L    L   P +   L
Sbjct: 507 FSVVPPH-ISKLAGLEVLHMNGNEIKELPAE--IGALINLKELDLSHNCLAALPAEFTAL 563

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           ++L  LD+S N L S+P G K+   + +L L  N ++
Sbjct: 564 RRLAELDISHNELTSLPVGIKSFQQICQLKLGHNRLA 600



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 18/371 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L+L +N +  L  +L NL  L  L++ +NKL+ +P  I  L  L++LD   N I ++
Sbjct: 245 LRHLLLRNNCLTSLPAELGNLSELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISEL 304

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G   +L + D S N L+ LP  L    +L    A+NN +TSLP  +     +S+L 
Sbjct: 305 PD-LGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELS 363

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N++T L +  IA  + L+ L AS N ++ +   + +L  L  L+L  N ++  P S+
Sbjct: 364 VTSNRITELPSE-IAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSV 422

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL--SN 284
                L +  +  N LS +P ++G+L+KL  L L  N++ E+  E  +  +++ DL   +
Sbjct: 423 FEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKI-EHLPEQMKEMVALKDLYIGS 481

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           NS +  PP + ++TTLR+L L  +       S+V      L       +  NE  E    
Sbjct: 482 NSFTEFPPVVFELTTLRELSLANSNF-----SVVPPHISKLAGLEVLHMNGNEIKELPAE 536

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              LI +        KEL L    L+A+P+E      + +LD+S N +  LP  + S   
Sbjct: 537 IGALINL--------KELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVGIKSFQQ 588

Query: 405 LQTLILSRNKI 415
           +  L L  N++
Sbjct: 589 ICQLKLGHNRL 599



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 178/394 (45%), Gaps = 48/394 (12%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +LP D  D     +LD++   LT L  + I     LT L  + N +  +P  I +L+RL 
Sbjct: 33  NLPRDFGD-----RLDLKNQNLTDLPKDFIIE--ELTWLSLNHNAIESLPPEIANLTRLT 85

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
              L  N++ S+P  I     L    +G N LS+LP ++G LS L  L +H N+L+E   
Sbjct: 86  IFRLFGNKLKSLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPP 145

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  +L  L  L+L  N L+ LP E+  +T L  L +  N   TL         PA++   
Sbjct: 146 EVGKLTALHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTL---------PAVIAQF 196

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            S                              L L G +  +I +E+  A  + KLDL  
Sbjct: 197 SSL---------------------------TNLKLVGNDFKSIGNELSHAVCLQKLDLRC 229

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LPPE+ +  +L+ L+L  N +   P A L +LS L  L L NN L  VP +    
Sbjct: 230 NFLTTLPPEIGNLTALRHLLLRNNCLTSLP-AELGNLSELLELSLGNNKLTWVPPE-ITR 287

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LD   N   + E P    L  LQEL +    L+  P  +  L  LR L  + N 
Sbjct: 288 LSNLRNLDFWEN--QISELPDLGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANNNE 345

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L S+P   + L  L+EL ++ N I+ LP E+  +
Sbjct: 346 LTSLPASIRGLVGLSELSVTSNRITELPSEIAQL 379



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 8/315 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQ+L ++ N ++ L E L  L  L  L  ++N+L+ LPA+I  L  L  L V+ N I 
Sbjct: 311 VSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRIT 370

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI   + L +   S+N + EL   L    +L   +  +N +   P  + +   + +
Sbjct: 371 ELPSEIAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQ 430

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++ GN L+V+ ++ I   T L  L  S N +  +PE +  +  L  L +  N     P 
Sbjct: 431 LNLFGNGLSVVPDD-IGRLTKLQRLYLSCNKIEHLPEQMKEMVALKDLYIGSNSFTEFPP 489

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            +    +L E  + N+  S +P  + KL+ L  L ++ N++KE   E   L  L  LDLS
Sbjct: 490 VVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDLS 549

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-----PENED 338
           +N L+ LP E   +  L +L ++ N L +L   + +      LK   +RL     P  ED
Sbjct: 550 HNCLAALPAEFTALRRLAELDISHNELTSLPVGIKSFQQICQLKLGHNRLAKSHIPHFED 609

Query: 339 SEASTTKEDLITMAT 353
                + E + T+AT
Sbjct: 610 PNMWVSSEGM-TVAT 623


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 157/515 (30%), Positives = 241/515 (46%), Gaps = 25/515 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 50  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 109

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 110 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 169

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 170 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV 228

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     +  QL+ L  L+L 
Sbjct: 229 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLV 288

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN       
Sbjct: 289 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLN 347

Query: 344 TKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEITKLD 386
             ++       LS+  K+ S            L G+NL     S +P EI     +  L 
Sbjct: 348 LAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLA 407

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++ 
Sbjct: 408 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE- 465

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ LDL
Sbjct: 466 IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDL 523

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 524 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 558



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 172/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 189 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 249 FPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 308

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 309 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 368

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 369 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 428

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 429 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 488

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 489 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 535

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 536 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 590



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 10/165 (6%)

Query: 20  SLRDVPNEV--YKNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
            L+++P+E+   KN +    EA E ++  + +    +LQKL L  N ++    ++  L  
Sbjct: 412 GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKK 471

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N+ +  P  IG+L  L++L++  N +  +P EI     L + D + NQ   L
Sbjct: 472 LQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVL 531

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L      NN +T+LP ++     +  L ++ N+ + 
Sbjct: 532 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 576


>gi|198415792|ref|XP_002126526.1| PREDICTED: similar to Leucine-rich repeat-containing protein 40
           [Ciona intestinalis]
          Length = 815

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 169/568 (29%), Positives = 274/568 (48%), Gaps = 55/568 (9%)

Query: 13  SLNLSNRSLRDVPNEVYK---NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLK 61
           SL++S  S++ +P  +Y+   + D +G   +    +        ++ ++ L+ N + KL 
Sbjct: 163 SLDVSQNSIKILPKSIYRLPRSLDVSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKLP 222

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFD 120
           ED+  L  LT +NVS N L  LP AIG L  L  LD S N+I   P  + S   +L   +
Sbjct: 223 EDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSLN 282

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            ++N L+ +P  +G    L  F  S N + +LP D+     + +L V  N LT LS   +
Sbjct: 283 LTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPNDMNGLVSLQQLHVSNNNLTNLSP--L 340

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L  L AS N +  +P  + +L  L  L+L  N++ S+P SI    +L + Y+ NN
Sbjct: 341 IGLLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSIGHIKALKQLYLRNN 400

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L +LP+ LG+   L  +D   N+L     +  + R L  L L+ N LS +P  I  +  
Sbjct: 401 RLESLPSTLGEQQLLQVVDASDNELTNLPDDLRKWRTLEQLILARNQLSQIPKSIKYLGM 460

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTP-ALLKYLRS--------RLPE--NEDSEASTTK--E 346
           L K  ++ N       + V  P P A  K LR         RLP    +D+ +  T+  +
Sbjct: 461 LDKFDVSDN-------NFVTSPLPDAASKVLRELRLAGNPWRLPPLGGDDNRSLITRIYK 513

Query: 347 DLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +L  + T L ++                 +EL L G ++ +IP  I     +  LD+S N
Sbjct: 514 ELNGIVTSLDLSRVELEEFPLSICNCRNLRELKLAGNSIKSIPGNIGRLRLLEILDVSNN 573

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  +P ++     LQ L +S N ++++    LT L SL  L    N L Q+P + F ++
Sbjct: 574 QVARIPEQIGILTHLQELHVSNNCLENFAQN-LTKLRSLQILNFAGNQLTQLP-ENFGEL 631

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L  +DLS N +  LP N     L  L  L +   +++  PTD+  L +++I++LS+N 
Sbjct: 632 NKLTSMDLSDNQLLELP-NDRIDVLASLMTLNISYNRVKNIPTDLPYLYRMQIINLSRND 690

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALP 537
           L+ +P     + SLT LDL+DN I ++P
Sbjct: 691 LKLLPIDIWRMKSLTSLDLTDNLIESIP 718



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 279/573 (48%), Gaps = 78/573 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLN+S+  L+ +P  ++K             A  L+   +++N I+KL +++     +T 
Sbjct: 118 SLNVSDNRLKALPKTIHK-------------ASGLETCDVSNNKIKKLPKNIGQ-SNMTS 163

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKFDCSSNQLKEL 129
           L+VS N +  LP +I  L   +SLDVS N I  +P  +    S   + + + S N+L +L
Sbjct: 164 LDVSQNSIKILPKSIYRLP--RSLDVSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKL 221

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +   L+    S N + SLP  +     +  LD   N + V   ++ +    LT L
Sbjct: 222 PEDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSL 281

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ IGSL RL    L  N++ ++P+ ++G  SL + ++ NN L+ L   +
Sbjct: 282 NLTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPNDMNGLVSLQQLHVSNNNLTNLSPLI 341

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L TLD  +N++     E   LR L +L+L+NN L+ LPP IG +  L++L L  N
Sbjct: 342 G-LLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSIGHIKALKQLYLRNN 400

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L S+L  G    L      ++ +  D+E +   +DL     R   T ++L L    
Sbjct: 401 RLESLPSTL--GEQQLL------QVVDASDNELTNLPDDL-----RKWRTLEQLILARNQ 447

Query: 369 LSAIPSEIWEAGEITKLDLSRNSI----------------------QELPP--------- 397
           LS IP  I   G + K D+S N+                         LPP         
Sbjct: 448 LSQIPKSIKYLGMLDKFDVSDNNFVTSPLPDAASKVLRELRLAGNPWRLPPLGGDDNRSL 507

Query: 398 ------ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
                 EL+   +  +L LSR +++++P +I  +  +L  LKL  N ++ +P +    + 
Sbjct: 508 ITRIYKELNGIVT--SLDLSRVELEEFPLSI-CNCRNLRELKLAGNSIKSIPGN-IGRLR 563

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
           +L+ILD+S N +A +PE      L HLQEL++    L     ++ +L+ L+IL+ + N L
Sbjct: 564 LLEILDVSNNQVARIPEQ--IGILTHLQELHVSNNCLENFAQNLTKLRSLQILNFAGNQL 621

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             +PE F  L  LT +DLSDN +  LP + + V
Sbjct: 622 TQLPENFGELNKLTSMDLSDNQLLELPNDRIDV 654



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 220/487 (45%), Gaps = 91/487 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL+N SL  +P       D  G   +      L+  +L+ N ++ L  D+  L  L  
Sbjct: 280 SLNLTNNSLESIP-------DGIGSLKR------LRVFMLSFNKLQTLPNDMNGLVSLQQ 326

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+VS+N L+ L   IG LH L++LD S N I  +P E+ +   L   + ++NQL  LP S
Sbjct: 327 LHVSNNNLTNLSPLIGLLH-LETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPS 385

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L      NN + SLP  L +   +  +D   N+LT L ++L   W  L +LI +
Sbjct: 386 IGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELTNLPDDL-RKWRTLEQLILA 444

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA----------- 241
           +N L+ +P++I  L  L + D+  N  ++ P   +    L E  +  N            
Sbjct: 445 RNQLSQIPKSIKYLGMLDKFDVSDNNFVTSPLPDAASKVLRELRLAGNPWRLPPLGGDDN 504

Query: 242 ---LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR---------------------- 276
              ++ +  EL  +  + +LDL   +L+E+ +  C  R                      
Sbjct: 505 RSLITRIYKELNGI--VTSLDLSRVELEEFPLSICNCRNLRELKLAGNSIKSIPGNIGRL 562

Query: 277 --LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---S 331
             L +LD+SNN ++ +P +IG +T L++L ++ N L     +L    +  +L +     +
Sbjct: 563 RLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQNLTKLRSLQILNFAGNQLT 622

Query: 332 RLPENEDS---------------EASTTKEDLITMATRLSVTSKELS-----------LE 365
           +LPEN                  E    + D++     L+++   +            ++
Sbjct: 623 QLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPTDLPYLYRMQ 682

Query: 366 GMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            +NLS      +P +IW    +T LDL+ N I+ +P  ++   +L+ L L+ NKIK WP 
Sbjct: 683 IINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLTDNKIKVWPK 742

Query: 421 --AILTS 425
             A+LTS
Sbjct: 743 CMAVLTS 749



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 40/357 (11%)

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           M + L A  N +  +P +I +L  L  +D+  N I ++P+S++    L+   + +N L A
Sbjct: 69  MTSVLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKA 128

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP  + K S L T D+ +N++K+      Q  ++ LD+S NS+  LP  I ++   R L 
Sbjct: 129 LPKTIHKASGLETCDVSNNKIKKLPKNIGQSNMTSLDVSQNSIKILPKSIYRLP--RSLD 186

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           ++GN +  L         P +                      +IT  ++ +++  +++L
Sbjct: 187 VSGNQIEVL---------PPI----------------------VITKKSKGNIS--QINL 213

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               LS +P +I +   +T +++S N +Q LP  + S   L  L  S N IK +P ++ +
Sbjct: 214 SDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKVFPQSVYS 273

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
              SL+ L L NN L  +P DG   +  L++  LS+N + +LP +   + L  LQ+L++ 
Sbjct: 274 LGFSLTSLNLTNNSLESIP-DGIGSLKRLRVFMLSFNKLQTLPND--MNGLVSLQQLHVS 330

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              L    + ++ L  L  LD S N + S+P     L  L  L+L++N +++LPP +
Sbjct: 331 NNNLTNL-SPLIGLLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSI 386



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 108/209 (51%), Gaps = 2/209 (0%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N +  +P  IG L +L+ LDVS N + +IP++IG  T L +   S+N L+    +
Sbjct: 545 LKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQN 604

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L +  +L     + N +T LPE+  + +K++ +D+  N+L  L N+ I     L  L  S
Sbjct: 605 LTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNIS 664

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P  +  L R+  ++L +N +  +P  I    SL    + +N + ++P  + KL
Sbjct: 665 YNRVKNIPTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKL 724

Query: 253 SKLGTLDLHSNQLKEY--CVEACQLRLSV 279
             L  L+L  N++K +  C+     ++ V
Sbjct: 725 PALKELNLTDNKIKVWPKCMAVLTSKVKV 753


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 241/515 (46%), Gaps = 25/515 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN       
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLRE-VAENGVYRNLN 345

Query: 344 TKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEITKLD 386
             ++       LS+  K+ S            L G+NL     S +P EI     +  L 
Sbjct: 346 LAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLA 405

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P++ 
Sbjct: 406 LGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE- 463

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ LDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL 521

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 10/165 (6%)

Query: 20  SLRDVPNEV--YKNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
            L+ +P+E+   +N +    EA E ++  + +    +LQKL L  N ++    ++  L  
Sbjct: 410 GLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKK 469

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N+ +  P  IG+L  L++L++  N +  +  EIG    L + D + NQ   L
Sbjct: 470 LQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVL 529

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L      NN +T+LP ++     +  L ++ N+L++
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSL 574


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 217/470 (46%), Gaps = 64/470 (13%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT+L    I     L EL  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE-IGQLQNLQELYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L L+++++ ++P  I    +L    +  + L+ LP E+GK
Sbjct: 169 SYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL  NQL     E  QL +L  L L  N L+ LP EIG++  L+ L L+ N +
Sbjct: 229 LQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQI 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +       L K     LP N+                               L+
Sbjct: 289 KTIPKEI-----EKLQKLQSLYLPNNQ-------------------------------LT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI +   +  LDLS N +  LP E+    +LQ L L  N++   P+ I   L +L 
Sbjct: 313 TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQ 371

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L  +     K+I  LQ                     +L+ L LR  QL   
Sbjct: 372 TLNLRNNRLTTLS----KEIEQLQ---------------------NLKSLDLRSNQLTIF 406

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +L+ L++LDL  N L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 407 PKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 456



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 223/447 (49%), Gaps = 24/447 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  L L+++++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQ 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E  + +N L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 225 EIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 285 YNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI-------------GQLQNLQSLDLST 331

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 332 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 389

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 390 LQNLKSLDLRSNQLTIFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 447

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQL 487
            + +LP+      L +LQEL+L   QL
Sbjct: 448 QLTTLPQE--IGQLQNLQELFLNNNQL 472



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 37/232 (15%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNLS   ++ +P E                             IEKL++       L  
Sbjct: 280 SLNLSYNQIKTIPKE-----------------------------IEKLQK-------LQS 303

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+SLD+S N +  +P EIG    L      SNQL  LP+ 
Sbjct: 304 LYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNE 363

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      NN +T+L +++     +  LD+  N+LT+     I     L  L   
Sbjct: 364 IGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQVLDLG 422

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            N L  +PE IG L  L  LDL  N++ ++P  I    +L E ++ NN LS+
Sbjct: 423 SNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 474


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 237/464 (51%), Gaps = 43/464 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T LN+S N+L+++P +I +L  L  LD+S N + ++P+ I     L + D S NQL ++
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P S+ + +NL+    S N +T +PE ++    ++KL++ GN+LT +S + I+    LT+L
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSES-ISQLVNLTQL 119

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L   PE+I  L  L +L L +N++  +P SIS   +L +  +  N L+ +P  +
Sbjct: 120 SLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESI 179

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L  L  LDL  N+L +      QL  L+ L+LS N L+ +   I ++  L +L L+GN
Sbjct: 180 SQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L                            ++ S +   L+ +         +LSL G  
Sbjct: 240 KL----------------------------TQVSESISQLVNLT--------QLSLSGNK 263

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I +   +T+L LS N + ++   +S   +L  L LS N++    ++I + L +
Sbjct: 264 LTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSSNQLTQVSESI-SQLVN 322

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L+ L L +N L QV S+    +  L  L+LS N +  +PE+   S L +L  L L   QL
Sbjct: 323 LTQLDLSSNQLTQV-SESISQLVNLTQLNLSINKLTQVPES--ISQLVNLTWLNLSDNQL 379

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
            + P  I +L  L  LDL  N +  IP+  + L +L ELDL  N
Sbjct: 380 TQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQN 423



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 235/447 (52%), Gaps = 20/447 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L L+ N + ++ E +  L  LT L++S N+L+++P +I +L  L  LD+S N + ++
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I     L K + S NQL ++P S+ + +NL+    S N +T + E ++    +++L 
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLS 120

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT    + I+    LT+L  S+N L  +PE+I  L  L +L+L  N++  +P SI
Sbjct: 121 LSGNQLTQFPES-ISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESI 179

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           S   +L +  +  N L+ +P  + +L  L  L+L  NQL +      QL  L+ L LS N
Sbjct: 180 SQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +   I ++  L +L L+GN L  +  S+       L+   +  L +N+ ++ S + 
Sbjct: 240 KLTQVSESISQLVNLTQLSLSGNKLTQVPESI-----SQLVNLTQLSLSDNQLTQVSESI 294

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L+ +         +L L    L+ +   I +   +T+LDLS N + ++   +S   +L
Sbjct: 295 SQLVNLT--------QLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNL 346

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
             L LS NK+   P++I + L +L+ L L +N L QVP +    +  L  LDL  N I  
Sbjct: 347 TQLNLSINKLTQVPESI-SQLVNLTWLNLSDNQLTQVP-ESISQLVNLTQLDLFGNKITE 404

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAP 491
           +P+      LP+L+EL LR+  L  +P
Sbjct: 405 IPD--WLEELPNLKELDLRQNPLPISP 429



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 254/504 (50%), Gaps = 40/504 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  VP  +              + V+L +L L+ N + ++ E +  L  LT L
Sbjct: 4   LNLSGNQLTQVPESIS-------------QLVNLTELDLSVNQLTQVPESISQLVNLTQL 50

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SHN+L+++P +I +L  L  L++S N + ++P+ I     L K + S NQL ++  S+
Sbjct: 51  DLSHNQLTQVPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESI 110

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + +NL+    S N +T  PE ++    +++L +  N+LT +  + I+    LT+L  S 
Sbjct: 111 SQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPES-ISQLVNLTQLNLSY 169

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE+I  L  L +LDL  N++  +P SIS   +L +  +  N L+ +   + +L 
Sbjct: 170 NQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLV 229

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L +      QL  L+ L LS N L+ +P  I ++  L +L L+ N L  
Sbjct: 230 NLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQ 289

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +  S+       L+   +  L  N+ ++ S +   L+ +         +L L    L+ +
Sbjct: 290 VSESI-----SQLVNLTQLDLSSNQLTQVSESISQLVNLT--------QLDLSSNQLTQV 336

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
              I +   +T+L+LS N + ++P  +S   +L  L LS N++   P++I + L +L+ L
Sbjct: 337 SESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESI-SQLVNLTQL 395

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE------LYLRRMQ 486
            L  N + ++P D  +++P L+ LDL  N   LP +P     P+ QE      ++    Q
Sbjct: 396 DLFGNKITEIP-DWLEELPNLKELDLRQN--PLPISPEILGSPYHQEPGSIEKIFNYCRQ 452

Query: 487 LREAPTDILRLQQLRILDLSQNSL 510
           LR    ++L L + ++L + Q S+
Sbjct: 453 LRSG--NVLPLNEAKLLLIGQGSV 474



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 207/423 (48%), Gaps = 41/423 (9%)

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           + + + S NQL ++P S+ + +NL++   S N +T +PE ++    +++LD+  N+LT +
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
             + I     LT+L  S N L  +PE+I  L  L +L+L  N++  +  SIS   +L + 
Sbjct: 61  PES-ITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQL 119

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
            +  N L+  P  + +L  L  L L  NQL +      QL  L+ L+LS N L+ +P  I
Sbjct: 120 SLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESI 179

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
            ++  L +L L+ N L  +  S+       L+   +  L  N+ ++ S +   L+ +   
Sbjct: 180 SQLVNLTQLDLSVNKLTQVPESI-----SQLVNLTQLNLSYNQLTQVSESISQLVNLT-- 232

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                 +LSL G  L+ +   I +   +T+L LS N + ++P  +S   +L  L LS N+
Sbjct: 233 ------QLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQ 286

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           +    ++I + L +L+ L L +N L QV S+    +  L  LDLS N             
Sbjct: 287 LTQVSESI-SQLVNLTQLDLSSNQLTQV-SESISQLVNLTQLDLSSN------------- 331

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
                      QL +    I +L  L  L+LS N L  +PE    L +LT L+LSDN ++
Sbjct: 332 -----------QLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLT 380

Query: 535 ALP 537
            +P
Sbjct: 381 QVP 383


>gi|410967549|ref|XP_003990281.1| PREDICTED: leucine-rich repeat-containing protein 40 [Felis catus]
          Length = 592

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 169/564 (29%), Positives = 270/564 (47%), Gaps = 70/564 (12%)

Query: 4   ILKAARTSGSLNLSNRSL-------------RDVPNEVYKNFDEAGEGDKWWEAVDLQKL 50
           +LKAAR SG LNLS R+L             R   N     F +    D     +D +  
Sbjct: 31  LLKAARKSGQLNLSGRNLSEDGGLLELILLSRSSKNNGTLYFPDRVLSDTHI-LLDFKST 89

Query: 51  IL-AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           IL  ++N+             T+  +  N+L+ LP+AI EL  L+ L+VS N +  +P E
Sbjct: 90  ILFMYSNV-------------TMTQIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPKE 136

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I +   L       N+L  +P    +  NL D   SNN +T++P      S + +L++  
Sbjct: 137 ITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTVPASFCSLSSLVRLNLSS 196

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L  L    I+    L  L  + N L  +P  + ++  L  L L +N++  +P     C
Sbjct: 197 NQLKSLPAE-ISGMKRLKHLDCNSNFLETVPPELANMESLELLYLRRNKLRFLPE-FPSC 254

Query: 230 CSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             L E ++G N +  L P  L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +
Sbjct: 255 RLLKELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDI 314

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           S LP  +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++E S++    E 
Sbjct: 315 SSLPCSLGKLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDEPSQSDPVTET 373

Query: 348 LITM--ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPE 398
            +T+   +R++V    T K L       + IP E+++A +   +T ++ S+N + E+P  
Sbjct: 374 AMTLPSESRVNVHAIVTLKILDYSDKQTTLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKR 433

Query: 399 LSSCASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           +     + + + LS N++       L  L  L+ L L NN L  +P +  + +  LQ ++
Sbjct: 434 IVELKEMVSDVNLSFNRLSSI-SLDLCMLQKLTFLDLRNNFLNSLPEE-MESLIRLQTIN 491

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEG 516
           LS+N         F  LP +         L   PT       L  + +S N + S+ P+ 
Sbjct: 492 LSFN--------RFKILPEV---------LYHIPT-------LETILISNNQVGSVDPQK 527

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
            K +  L  LDL +N++  +PPEL
Sbjct: 528 MKAMEKLITLDLQNNDLLQIPPEL 551



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 286 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 344

Query: 111 --GSATAL------VKFD--CSSNQLKE----LPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D    S+ + E    LPS    ++   + L     S+   T +
Sbjct: 345 NKGTQEVLKYLRSKIKDDEPSQSDPVTETAMTLPSESRVNVHAIVTLKILDYSDKQTTLI 404

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 405 PDEVFDAVKSNIVTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRLSSISLDLCMLQKL 464

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 465 TFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYHIPTLETILISNNQVGSVD 524

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  +   +L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 525 PQKMKAMEKLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 584

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 585 YLRDRIP 591



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 180/434 (41%), Gaps = 74/434 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 192 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NFLETVPPELANMESLELL 238

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M  P+ +    +++  D   N+LK +P  
Sbjct: 239 YLRRNKLRFLPE-FPSCRLLKELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDE 297

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T        
Sbjct: 298 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 356

Query: 193 KNLLNGMP-------ETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
             + +  P       ET  +L    R+++H    L I           P  +        
Sbjct: 357 SKIKDDEPSQSDPVTETAMTLPSESRVNVHAIVTLKILDYSDKQTTLIPDEVFDAVKSNI 416

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++ + ++L  N+L    ++ C L +L+ LDL NN L+ 
Sbjct: 417 VTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRLSSISLDLCMLQKLTFLDLRNNFLNS 476

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 477 LPEEMESLIRLQTINLSFNRFKILPEVLYHIPT--------------------------- 509

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T L +++ ++       S  P ++    ++  LDL  N + ++PPEL +C +L+TL+
Sbjct: 510 -LETIL-ISNNQVG------SVDPQKMKAMEKLITLDLQNNDLLQIPPELGNCVNLRTLL 561

Query: 410 LSRNKIKDWPDAIL 423
           L  N  +    AIL
Sbjct: 562 LDGNPFRVPRAAIL 575



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 26/168 (15%)

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           ++    +T   +  N +  LP  +    +LQ L +S NK++  P  I T+L +L  L L 
Sbjct: 91  LFMYSNVTMTQIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPKEI-TNLRNLKGLYLQ 149

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           +N L  +P +GF+ +  L+ LDLS N                        +L   P    
Sbjct: 150 HNELTCIP-EGFEQLFNLEDLDLSNN------------------------RLTTVPASFC 184

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L  L  L+LS N L+S+P     +  L  LD + N +  +PPEL ++
Sbjct: 185 SLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNFLETVPPELANM 232


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 248/560 (44%), Gaps = 84/560 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N I  + E +  L  L  L
Sbjct: 18  LDLSNQGLTSIPEEVF-------------DITDLEILDVSNNKIISIPEAICRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AI  L  LK L V  N++ ++PD +     L       N+L +LP+ +
Sbjct: 65  DAYSNMLTSLPQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKI 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L EL  S 
Sbjct: 125 FSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEELDVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L +  N++  +PS +     L    +GNN LSA P  + KL 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEKLQ 243

Query: 254 KLGTLDLHS----------------------------NQLKEYCVEACQL-RLSVLDLSN 284
           KL  L ++                             NQL E     C L  L +L + N
Sbjct: 244 KLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGN 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N LS  PP + K+  LRKL + GN L  + SS+ + P                       
Sbjct: 304 NKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPN---------------------- 341

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                     L V    LS+    LS  P  + +  ++ +L +  N + E+P  + S   
Sbjct: 342 ----------LEV----LSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPH 387

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L +  NK+  +P  +   L  L  L + +N L +VPS G   +P L++L +  N ++
Sbjct: 388 LEVLSVYNNKLSTFPPGV-EKLQKLRELYIQDNQLTEVPS-GVCSLPHLELLTVGNNKLS 445

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
             P  P    L  L++LY+   QL E P+ +  L  L +L +  N L + P G + L  L
Sbjct: 446 KFP--PGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKL 503

Query: 524 TELDLSDNNISALPPELVSV 543
             L +  +     P +++ +
Sbjct: 504 KSLSVPASQFDEFPRQVLQL 523



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 209/439 (47%), Gaps = 25/439 (5%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +    +K D S+  L  +P  +    +L     SNN I S+PE +    K+ +LD   N 
Sbjct: 11  TVNGRLKLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I+S   L +L    N L+ +P+ +  L +L  L +  N++  +P+ I  C +
Sbjct: 71  LTSLP-QAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSCLN 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L  F   NN LSA P  + KL KL  L ++ NQL E     C L  L  LD+SNN LS  
Sbjct: 130 LVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTF 189

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L +  N L  + S + + P   LL    ++L     S      E L  
Sbjct: 190 PPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKL-----SAFPPGVEKLQK 244

Query: 351 MATRLSVTSKELSLEGM-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +        +EL + G+      LS  P  + +  ++ +L +  N + E+P  + S   L
Sbjct: 245 L--------RELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHL 296

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L +  NK+  +P  +   L  L  L +  N L +VPS     +P L++L +  N +++
Sbjct: 297 ELLTVGNNKLSKFPPGV-EKLQKLRKLYIYGNQLTEVPS-SVCSLPNLEVLSVYNNKLST 354

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
            P  P    L  L+ELY++  QL E P+ +  L  L +L +  N L + P G + L  L 
Sbjct: 355 FP--PGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLR 412

Query: 525 ELDLSDNNISALPPELVSV 543
           EL + DN ++ +P  + S+
Sbjct: 413 ELYIQDNQLTEVPSGVCSL 431



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 213/479 (44%), Gaps = 42/479 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L + +N + K    +  L  L  L +  N+L+E+P+++  L  L+ L V  N +   
Sbjct: 296 LELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTF 355

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +     L +     NQL E+PS +    +L      NN +++ P  +    K+ +L 
Sbjct: 356 PPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELY 415

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  +PSS+
Sbjct: 416 IQDNQLTEVPSG-VCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSV 474

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
               +L    + NN LS  P  + KL KL +L + ++Q  E+  +  QL+    L     
Sbjct: 475 CSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQLKTLEELYAGQA 534

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEA 341
                  +P E+G +  L  L L  N LRTL         P+ + +L + R+ +  +++ 
Sbjct: 535 GGRKFDIVPDEVGNLQHLWFLALENNLLRTL---------PSTMSHLHNLRVVQLWNNKF 585

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T  E L  +        ++L +   N++ +P+ +  A ++  LD+S N +   P ++  
Sbjct: 586 DTFPEVLCELPAM-----EKLDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCE 640

Query: 402 CASLQTL-ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
             +   +  L +  +K+  + IL + + LS +++     +          P+ + L LS 
Sbjct: 641 QGTGAIMAFLKQESVKE--ERILRAFNRLS-VRMSQTQWK----------PLARSLGLSN 687

Query: 461 NI-----ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
                  AS P++ P       Q L  RR +  EA T     Q LR LD  Q + Q  P
Sbjct: 688 RAMDAIKASAPDDVPDQV---YQTLVQRREKEGEAATLSALEQHLRDLDFQQLAEQISP 743


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 229/494 (46%), Gaps = 43/494 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  LN+  N+L+ LP  IG+L  L+ L++  N +  +P EIG
Sbjct: 57  LSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIG 116

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L   +   NQL  LP  +G+  NL     S N +T+ P+++     + +L+++ N+
Sbjct: 117 QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNR 176

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L +N++ + P  I     
Sbjct: 177 LTAL------------------------PKEIGQLKNLENLELSENQLTTFPKEIGQLKK 212

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGL 290
           L +  +G N L+  P E+G+L  L  LDL  NQ K    E      L  L+LS N L+ L
Sbjct: 213 LQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATL 272

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG++  L+ L L  N L TL         P  +  L++    +  +   TT    I 
Sbjct: 273 PAEIGQLKKLQDLSLGRNQLTTL---------PKEIGQLKNLYNLDLGTNQLTTLPKEIG 323

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               L      L L    L+  P EI +   + +LDL  N +  LP E+    +L+ L L
Sbjct: 324 QLKNLY----NLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLEL 379

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           S N++  +P  I   L  L  L L  N L  +P +    +  LQ L LSYN + +LP+  
Sbjct: 380 SENQLTTFPKEI-GQLKKLQDLGLSYNRLVILPKE-IGQLKNLQTLSLSYNRLTTLPKE- 436

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +L+ L L   +L   P +I +LQ L+ LDL  N   + P+    L +L  LDL 
Sbjct: 437 -IGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLG 495

Query: 530 DNNISALPPELVSV 543
           +N ++ALP E+  +
Sbjct: 496 NNQLTALPKEIAQL 509



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 241/560 (43%), Gaps = 95/560 (16%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS ++   +P E+   KN       D     +        +L+KL L  N +  L ++
Sbjct: 55  LNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   
Sbjct: 115 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKW 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---- 179
           N+L  LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +    
Sbjct: 175 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK 234

Query: 180 ------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
                             I     L +L  S N L  +P  IG L +L  L L +N++ +
Sbjct: 235 NLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTT 294

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  L
Sbjct: 295 LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQEL 354

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DL NN L+ LP EIG++  L  L L+ N L T    +        LK L           
Sbjct: 355 DLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL----------- 397

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                +DL     RL +              +P EI +   +  L LS N +  LP E+ 
Sbjct: 398 -----QDLGLSYNRLVI--------------LPKEIGQLKNLQTLSLSYNRLTTLPKEIG 438

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              +L+ L LS N++   P  I   L +L  L LD N     P    K+I  LQ L   Y
Sbjct: 439 QLKNLENLELSENRLATLPKEI-GQLQNLQKLDLDTNRFATFP----KEIGQLQNL---Y 490

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           N+                   L   QL   P +I +L+ L  LDL+ N L ++P+    L
Sbjct: 491 NLD------------------LGNNQLTALPKEIAQLKNLYDLDLNTNQLTTLPKEIGQL 532

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L  L L  N ++ LP E+
Sbjct: 533 KNLYNLGLGTNQLTTLPKEI 552



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L LS   L   P E+   K   + G G         +  +  +LQ L L +N  + + +
Sbjct: 192 NLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK 251

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S+N+L+ LPA IG+L  L+ L +  N +  +P EIG    L   D  
Sbjct: 252 EIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLG 311

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL +     N +T+ P+++     + +LD+  N+LT L    I  
Sbjct: 312 TNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQ 370

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S+N L   P+ IG L +L  L L  NR++ +P  I    +L    +  N L
Sbjct: 371 LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRL 430

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L  L+L  N+L     E  QL+ L  LDL  N  +  P EIG++  L 
Sbjct: 431 TTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLY 490

Query: 302 KLLLTGNPLRTL 313
            L L  N L  L
Sbjct: 491 NLDLGNNQLTAL 502



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 203/426 (47%), Gaps = 17/426 (3%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   LN+     S    T+LP+++     +  L+++ N+L  L    I     L
Sbjct: 40  RDLTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVE-IGQLQNL 98

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            +L   KN L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N L+  P
Sbjct: 99  EKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 158

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L  N+L     E  QL+ L  L+LS N L+  P EIG++  L+ L L
Sbjct: 159 KEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGL 218

Query: 306 TGNPLRTLRSSLVNGPTPALLK--YLRSRLPENE------DSEASTTKEDLITMATRLSV 357
             N L T    +       +L   Y + +    E        + + +   L T+   +  
Sbjct: 219 GRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQ 278

Query: 358 TSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
             K  +LSL    L+ +P EI +   +  LDL  N +  LP E+    +L  L L RN++
Sbjct: 279 LKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQL 338

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
             +P  I   L +L  L L NN L  +P +    +  L+ L+LS N + + P+      L
Sbjct: 339 TTFPKEI-GQLENLQELDLWNNRLTALPKE-IGQLKNLENLELSENQLTTFPKE--IGQL 394

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             LQ+L L   +L   P +I +L+ L+ L LS N L ++P+    L +L  L+LS+N ++
Sbjct: 395 KKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLA 454

Query: 535 ALPPEL 540
            LP E+
Sbjct: 455 TLPKEI 460


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 245/529 (46%), Gaps = 54/529 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQKL L+ NNIE++   + NL  L  L++ +N LS +P  +G+L  L  L++S N + 
Sbjct: 117 VNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLT 176

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P  +G+   L     S N+L  +   +G  + L     S N I  +P  +     +  
Sbjct: 177 ELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIGKLKSLKM 236

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ NKLT L  + I     L E+  S N +   PE+IG L  L  L+   N++  +P 
Sbjct: 237 LHIDRNKLTNLPID-IGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPV 295

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQL------- 275
           S      L E  + NN + +LP  +GKL  L  LD+  N L+     +  C L       
Sbjct: 296 SFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVIT 355

Query: 276 ------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  L+ L +  N +  LP EIG +++L  L++  NP+R     + N     L KY 
Sbjct: 356 CWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYW 415

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           + +     D E          +   +   S+++SL+  +L+ IP  I +   I +LDLSR
Sbjct: 416 QKK-----DQE----------LLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSR 460

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+     L+ L +S N + D P     S S L  L L  N L + P D  ++
Sbjct: 461 NKLSYLPLEMCQLTQLENLDISNNNLIDLPG----SFSDLKILNLSRNNLTEFP-DNLEN 515

Query: 450 IPMLQI-------LDLSYNIASLP---------ENPPFS--SLPHLQELYLRRMQLREAP 491
           I  + I       + +  N++ L          +N P    S   L  L L    + E P
Sbjct: 516 IQQIDISQNCLQNIHIGMNLSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIP 575

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             I  LQ+L I+D+ +N ++SIP+   N+  L EL +S+N I  +P  L
Sbjct: 576 PGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPL 624



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 247/535 (46%), Gaps = 60/535 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L+ N I ++   +  L  L +L++  NKL+ LP  IG+L  L+ +++S N I+
Sbjct: 209 VELRTLDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKIL 268

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P+ IG    L   +  +NQLK LP S      L +   SNN I SLP  +     +  
Sbjct: 269 DFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKY 328

Query: 165 LDVEGNKL----------TVLSNNLIASWTMLTELIASK---NLLNGMPETIGSLSRLIR 211
           LD+  N L           ++S ++I  W ML EL + K   N +  +P  IG LS L  
Sbjct: 329 LDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLST 388

Query: 212 LDLHQNRILSIPSSI--SGCCSLAEFY-------------------MGNNALSALPAELG 250
           L +  N I   P  I   G   L +++                   +  N L+ +P  + 
Sbjct: 389 LVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSIS 448

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           + + +  LDL  N+L    +E CQL +L  LD+SNN+L  LP   G  + L+ L L+ N 
Sbjct: 449 QYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLP---GSFSDLKILNLSRNN 505

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L     +L N                 +  + S      I +   LS  +  +++    L
Sbjct: 506 LTEFPDNLENI----------------QQIDISQNCLQNIHIGMNLSKLT-HVNMRDTKL 548

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
              P ++  A E+  L+LS N+I+E+PP + +   L  + +  NKI+  P  I  +++ L
Sbjct: 549 KNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEI-GNMNRL 607

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLR 488
             L + NN +  +P    K +  L +LD+ + N+  LP  P F  L  LQ L L      
Sbjct: 608 KELHISNNKIGNIPEPLCK-LRELTLLDIRNNNLKELP--PQFGELHELQILQLSGNVFN 664

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           E P  I +L +L  L LS N++ SIP     L SL E+ +  N I+ LP EL+ +
Sbjct: 665 EFPPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLEL 719



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 241/503 (47%), Gaps = 59/503 (11%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KL+ LP +I E    + L++  NS   +P EI     L + + S N ++ +P SL +   
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTA 94

Query: 139 LSDFKASNN-CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L+    + N  I  L  D++    + KLD+  N +  +    I +   L EL    N+L+
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRT-ILNLCALQELDLHYNMLS 153

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P  +G L  L  L+L QN++  +P ++     L    + +N L ++  E+G L +L T
Sbjct: 154 TIPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRT 213

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LDL  N++ E      +L+ L +L +  N L+ LP +IGK+  L+++ ++ N +     S
Sbjct: 214 LDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPES 273

Query: 317 ---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              LVN      L++L ++     +++        + ++       +E+++    + ++P
Sbjct: 274 IGGLVN------LQFLNAK-----NNQLKCLPVSFVNLSKL-----REVNVSNNYIESLP 317

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCA--------------SLQTLILSRNKIKDWP 419
             I +  ++  LD+S N ++ LPP +  C                L +L + RN+IK  P
Sbjct: 318 RSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLP 377

Query: 420 DAILTSLSSLSCLKLDNNPLRQVP----SDGF---------KDIPMLQILDLSYNIASLP 466
             I   LSSLS L +D+NP+R+ P    ++G          KD  +L+ +  +    SL 
Sbjct: 378 REI-GYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLK 436

Query: 467 EN------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           +N         S   H+Q+L L R +L   P ++ +L QL  LD+S N+L  +P  F +L
Sbjct: 437 QNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLPGSFSDL 496

Query: 521 TSLTELDLSDNNISALPPELVSV 543
                L+LS NN++  P  L ++
Sbjct: 497 KI---LNLSRNNLTEFPDNLENI 516



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 237/527 (44%), Gaps = 58/527 (11%)

Query: 44   AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            A +L  L L+ NNIE++   + NL  L +++V  NK+  +P  IG ++ LK L +S N I
Sbjct: 558  ASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKI 617

Query: 104  MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
              IP+ +     L   D  +N LKELP   G    L   + S N     P  ++  +K+ 
Sbjct: 618  GNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLV 677

Query: 164  KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            KL + GN +T + +  I     L E+    N++  +P  +  L ++I+L L +N+    P
Sbjct: 678  KLYLSGNNMTSIPST-IGRLKSLEEMSIDGNIITELPAELLEL-QIIKLQLIENQ-QDTP 734

Query: 224  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--------- 274
                    L+      + ++  P  + + SKL ++ +   +      + C+         
Sbjct: 735  LK-DFVAELSRLKQNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQNA 793

Query: 275  ------------LR-----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                        LR      S +D +N  L  LP  IG+   L+KL L  N L TL   +
Sbjct: 794  IKKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEV 853

Query: 318  VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             N  +   L    +   EN  S  S   E+L+T+    +       L  M++S +     
Sbjct: 854  SNLTSLESLNLADNSF-ENYPSVLSHL-ENLVTLNLNHN------KLTAMHISLV----- 900

Query: 378  EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
                I +LD S N++  +P  +S  + L       NKI D P +I   L SL  L+L +N
Sbjct: 901  ---NIKELDASHNNLVAIPNTVSQASQLT------NKINDDP-SITLDLKSLKVLRLTHN 950

Query: 438  PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
             L  +PS     +  L +LD+S N +  +P+      L +L+ELYL   +++  P +I  
Sbjct: 951  KLTSIPS--VDSLLELTVLDISDNKLQKIPKQ--IRILKNLKELYLSNNEIKTVPCEITH 1006

Query: 497  LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L +L  LD+S N L+ +P    N+T+L  L +  N +  LP  +V +
Sbjct: 1007 LTELHELDISNNELEHLPPEIDNMTNLQSLYIQRNRLMELPRTIVHI 1053



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 221/492 (44%), Gaps = 62/492 (12%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L++L +++N I  + E L  L  LT+L++ +N L ELP   GELH L+ L +S N   + 
Sbjct: 607  LKELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEF 666

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            P  I   T LVK   S N +  +PS++GR  +L +     N IT LP +L +  ++ KL 
Sbjct: 667  PPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLEL-QIIKLQ 725

Query: 167  VEGNKLTVLSNNLIASWTMLTE----------LIASKNLLNGMPETIGSLSRLIRLDLHQ 216
            +  N+      + +A  + L +          +I   + LN +  T G  + +   D+ +
Sbjct: 726  LIENQQDTPLKDFVAELSRLKQNGSTVAISPRIINRNSKLNSICVT-GIKTGVSSTDVCK 784

Query: 217  NRILSIPSSISGCCS-------------LAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            N  +   ++I                   ++    N  L  LP  +G+ ++L  L+L SN
Sbjct: 785  NVCMKGQNAIKKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSN 844

Query: 264  QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
             L     E   L  L  L+L++NS    P  +  +  L  L L  N L  +  SLVN   
Sbjct: 845  HLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIKE 904

Query: 323  PALLKYLRSRLPENEDSEASTTKEDL-----ITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                      +P N  S+AS     +     IT+  +   + K L L    L++IPS + 
Sbjct: 905  LDASHNNLVAIP-NTVSQASQLTNKINDDPSITLDLK---SLKVLRLTHNKLTSIPS-VD 959

Query: 378  EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
               E+T LD+S N +Q++P ++    +L+ L LS N+IK  P  I T L+ L  L + NN
Sbjct: 960  SLLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEI-THLTELHELDISNN 1018

Query: 438  PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
             L  +P                         P   ++ +LQ LY++R +L E P  I+ +
Sbjct: 1019 ELEHLP-------------------------PEIDNMTNLQSLYIQRNRLMELPRTIVHI 1053

Query: 498  QQLRILDLSQNS 509
              L+ +D S NS
Sbjct: 1054 DNLKYIDASGNS 1065



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 158/397 (39%), Gaps = 107/397 (26%)

Query: 27   EVYKNFDEAGEG--DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
            +V KN    G+    K W+ +D++ L        +L+ED  ++      + ++  L +LP
Sbjct: 781  DVCKNVCMKGQNAIKKMWDELDIETL-------RRLEEDTSDI------DFANRDLQKLP 827

Query: 85   AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
              IG    LK L++  N +  +P+E+ + T+L                    LNL+D   
Sbjct: 828  GVIGRFAELKKLNLKSNHLDTLPEEVSNLTSL------------------ESLNLAD--- 866

Query: 145  SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
              N   + P  L+    +  L++  NKLT +  +L+     + EL AS N L  +P T+ 
Sbjct: 867  --NSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVN----IKELDASHNNLVAIPNTVS 920

Query: 205  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
              S+L       N+I   PS      SL    + +N L+++P+                 
Sbjct: 921  QASQLT------NKINDDPSITLDLKSLKVLRLTHNKLTSIPS----------------- 957

Query: 265  LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                 V++  L L+VLD+S+N L  +P +I  +  L++L L+ N ++T+           
Sbjct: 958  -----VDSL-LELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCE-------- 1003

Query: 325  LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                    IT  T L     EL +    L  +P EI     +  
Sbjct: 1004 ------------------------ITHLTELH----ELDISNNELEHLPPEIDNMTNLQS 1035

Query: 385  LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
            L + RN + ELP  +    +L+ +  S N     P A
Sbjct: 1036 LYIQRNRLMELPRTIVHIDNLKYIDASGNSSMREPPA 1072



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            ++L  L ++ N ++K+ + +R L  L  L +S+N++  +P  I  L  L  LD+S N + 
Sbjct: 962  LELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELE 1021

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS-NNCITSLPEDLAD 158
             +P EI + T L       N+L ELP ++    NL    AS N+ +   P D+ D
Sbjct: 1022 HLPPEIDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGNSSMREPPADVCD 1076


>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
 gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
          Length = 650

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 163/582 (28%), Positives = 270/582 (46%), Gaps = 74/582 (12%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVY--KNFDEAG-----------EGDKWWEAVDLQK 49
           ++ K AR SG+LNLSN+ L  VP ++Y   + DE             E D WW  V +  
Sbjct: 54  QLWKLARRSGNLNLSNKGLARVPQKLYDINDVDEDSKAANLEQLCIKEEDAWWNQVPITN 113

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N + +L   + NL  LTVL +  N L ELP  IG+L  L  L++S N + ++P E
Sbjct: 114 LDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQLPRE 173

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           + S   L   + S N+  EL   +     L    AS+N + SLP  +    +++ L +  
Sbjct: 174 LFSLPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLLLPY 233

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N +  L  +L+ +  +L +L   +N +  +P+ +G + +L  L +  N I  +P    G 
Sbjct: 234 NHIKELPPDLV-NMRVLQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIKELPE-FEGN 291

Query: 230 CSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
            +L E +  NN ++++P  L   L  L   DL  NQ+ +   E C LR L  LD+SNNS+
Sbjct: 292 EALTEVHASNNYITSIPKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQRLDVSNNSI 351

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR--------------- 332
           S LP  +  +  L  L + GNP++T+R  ++   T  +LK L+ R               
Sbjct: 352 SVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQCGTTRILKVLQDRAQAQPKEKGGANGGS 411

Query: 333 -----LPENEDS---EASTTKEDLI--TMATRLSV-TSKELSLEGMNLSAIPSEIWEAGE 381
                L E  D+       T + ++      R  +  +  L++    L+ +P +++E   
Sbjct: 412 GSGGSLTETMDALRLGGGQTNDGIMPENFPDRYKLRHTHTLAVNLEELTNVPDQVFEIAR 471

Query: 382 ---ITKLDLSRNSIQELPPELSSCASL-QTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              +  +D +RN +  LP  L     L + L+LS N I   P  I +  + ++ L L NN
Sbjct: 472 SENVNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFI-SQFTRITFLNLSNN 530

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
            L+++P +                         F  L  L+EL +   +    P+ +  L
Sbjct: 531 LLKELPKE-------------------------FGVLNTLRELNIANNRFDCIPSCLYEL 565

Query: 498 QQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPP 538
           Q+L IL  S+N ++ +   G K ++ L  LDL +N+I  +PP
Sbjct: 566 QRLEILVASENHIKELNVSGLKAMSCLATLDLRNNDIEFIPP 607



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPE---DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +T++P+   ++A    ++ +D   NKL  L N L     ++ EL+ S NL++ +P+ I  
Sbjct: 459 LTNVPDQVFEIARSENVNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFISQ 518

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P       +L E  + NN    +P+ L +L +L  L    N +
Sbjct: 519 FTRITFLNLSNNLLKELPKEFGVLNTLRELNIANNRFDCIPSCLYELQRLEILVASENHI 578

Query: 266 KEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           KE  V   +    L+ LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 579 KELNVSGLKAMSCLATLDLRNNDIEFIPPILGNLTNITHLELIGNPFRQPRHQILIKGTE 638

Query: 324 ALLKYLRSRLP 334
           +++ YLR R+P
Sbjct: 639 SIMSYLRDRIP 649



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 145/290 (50%), Gaps = 19/290 (6%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +  LDL SN L     +   L  L+VL L +N+L  LPP+IGK+  L +L L+ N L  L
Sbjct: 111 ITNLDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQL 170

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              L + P   +L++L   +  NE +E +    DL  M   L  +  +L        ++P
Sbjct: 171 PRELFSLP---VLRHLN--ISYNEFTELNPDVSDL-HMLEWLDASHNKLQ-------SLP 217

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I     +T L L  N I+ELPP+L +   LQ L L +N I   PD  +  +  L CL 
Sbjct: 218 GGIGFLVRLTSLLLPYNHIKELPPDLVNMRVLQKLDLMQNDIIKLPDD-MGLIRKLECLY 276

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           + +N ++++P   F+    L  +  S N I S+P+    ++LPHL+   LR  Q+ + P 
Sbjct: 277 IQHNDIKELPE--FEGNEALTEVHASNNYITSIPKGL-CTNLPHLKIFDLRDNQITQLPD 333

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           ++  L+ L+ LD+S NS+  +P    +L  L  L +  N I  +  +++ 
Sbjct: 334 EVCLLRNLQRLDVSNNSISVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQ 383



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    IT LDLS N++  L P++ +  +L  LIL  N + + P  I   L  L+ L L +
Sbjct: 106 WNQVPITNLDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQI-GKLEKLTRLNLSH 164

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L Q+P + F  +P+L+ L++SYN                        +  E   D+  
Sbjct: 165 NKLSQLPRELFS-LPVLRHLNISYN------------------------EFTELNPDVSD 199

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD S N LQS+P G   L  LT L L  N+I  LPP+LV++
Sbjct: 200 LHMLEWLDASHNKLQSLPGGIGFLVRLTSLLLPYNHIKELPPDLVNM 246



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELH-MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           + V++ + NKL  LP  +  +  ++K L +S N I  +P  I   T +   + S+N LKE
Sbjct: 475 VNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFISQFTRITFLNLSNNLLKE 534

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP   G    L +   +NN    +P  L +  ++  L    N +  L+ + + + + L  
Sbjct: 535 LPKEFGVLNTLRELNIANNRFDCIPSCLYELQRLEILVASENHIKELNVSGLKAMSCLAT 594

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDL 214
           L    N +  +P  +G+L+ +  L+L
Sbjct: 595 LDLRNNDIEFIPPILGNLTNITHLEL 620


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 247/547 (45%), Gaps = 63/547 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIEQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+  P E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  NP   
Sbjct: 256 NLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSL 315

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS--------- 363
                +    P     LR  + EN         ++       LS+  K+ S         
Sbjct: 316 KERKRIQKLFPDSNLDLRE-VAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILK 374

Query: 364 ---LEGMNL-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
              L G+NL     S +P EI     +  L L  N ++ +P E+    +L+ L L  N++
Sbjct: 375 FRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANEL 434

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSS 473
           +  P  I   L +L  L L  N L+  P++  + +  LQ LDLS N     L E      
Sbjct: 435 ERLPKEI-GQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFLKE---IGK 489

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +LQ L L+R QL     +I +LQ L+ LDL+ N    +P+    L  L  LDL +N +
Sbjct: 490 LENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 534 SALPPEL 540
           + LP E+
Sbjct: 550 TTLPTEI 556



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 189/434 (43%), Gaps = 71/434 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     + +L+++ N LTVL    I     L EL    N
Sbjct: 51  RVLNLSGEK-----LTALPKEIGQLKNLQELNLKWNLLTVLPKE-IEQLENLQELDLRDN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P E+G+L  
Sbjct: 105 QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L  N L TL
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L++                            +EL L    L+  P
Sbjct: 225 ---------PVEIGQLQN---------------------------LQELYLRNNRLTVFP 248

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  L    N +  LP E+    +LQTL L  N++  +P  I   L +L  L+
Sbjct: 249 KEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLE 307

Query: 434 LDNNP-------------------LRQVPSDG-FKDIPM-----LQILDLSYNIASLPEN 468
           L  NP                   LR+V  +G ++++ +     L++ +LS       ++
Sbjct: 308 LLMNPFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQS 367

Query: 469 PP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
            P       +L+ L L        P +I RL+ L+ L L  N L++IP     L +L  L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 527 DLSDNNISALPPEL 540
           +L  N +  LP E+
Sbjct: 428 NLEANELERLPKEI 441



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 171/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N  +                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 134/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T          T L E   
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFT----------TFLKE--- 486

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                      IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 487 -----------IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 209/427 (48%), Gaps = 43/427 (10%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  +N+  N+L+ LPA IG+L  L+ L +  N +  +P EIG  TALV+     N L EL
Sbjct: 9   LRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTEL 68

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+  +L + K   N +TS+P ++   + +   ++  N+LT L    I     L EL
Sbjct: 69  PAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAE-IGQLKSLREL 127

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P  IG L+ L+ L L  N + S+P+ I    SL E  + +N L+ LPAE+
Sbjct: 128 NLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEI 187

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L L  N+L     E  QL  L V +L+ N L+ LP EIG++ +LR+L L+ N
Sbjct: 188 GQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNN 247

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         PA +  L+S +                           EL LE   
Sbjct: 248 QLTSL---------PAEIGQLKSLV---------------------------ELKLEDNM 271

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P+EI +   + +L+L  N +  +P E+    SL  L L  N + + P  I   L S
Sbjct: 272 LTELPAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEI-GQLKS 330

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  LKL NN L  VP++    +  L  LDL  N + S+P       L  L EL L + QL
Sbjct: 331 LRELKLWNNRLTSVPAE-IGQLTSLTELDLRCNELTSVP--AEIGQLTSLTELVLHKNQL 387

Query: 488 REAPTDI 494
              P +I
Sbjct: 388 TSLPAEI 394



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 211/419 (50%), Gaps = 31/419 (7%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L A RT   +NL    L  +P E+              +   L++L L  N +  +  ++
Sbjct: 6   LGALRT---MNLGVNQLTSLPAEI-------------GQLTSLRELGLEGNELTSVPAEI 49

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +  N L+ELPA IG+L  L  L +  N +  +P EIG   +LV  + + N
Sbjct: 50  GQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYN 109

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL ELP+ +G+  +L +   SNN +T LP ++   + + +L +EGN+LT +    I    
Sbjct: 110 QLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAE-IGQLA 168

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL    N+L  +P  IG L  L+ L L  N + S+P+ I    SL    +  N L+ 
Sbjct: 169 SLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTE 228

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LPAE+G+L  L  L+L +NQL     E  QL+ L  L L +N L+ LP EIG++ +L +L
Sbjct: 229 LPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVEL 288

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L ++ + +  G   +L++    +L +N  +E       L ++        +EL 
Sbjct: 289 NLYNNRLTSVPAEI--GQLTSLVEL---KLEDNMLTELPAEIGQLKSL--------RELK 335

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           L    L+++P+EI +   +T+LDL  N +  +P E+    SL  L+L +N++   P  I
Sbjct: 336 LWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 212/412 (51%), Gaps = 43/412 (10%)

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           + +GR   L       N +TSLP ++   + + +L +EGN+LT                 
Sbjct: 1   AEVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELT----------------- 43

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                   +P  IG L+ L+ L L  N +  +P+ I    SL E  +  N L+++PAE+G
Sbjct: 44  -------SVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIG 96

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L+ L   +L+ NQL E   E  QL+ L  L+LSNN L+ LP EIG++T+L +L L GN 
Sbjct: 97  QLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNE 156

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L ++ + +  G   +L++    +L +N  +E       L ++         EL LEG  L
Sbjct: 157 LTSVPAEI--GQLASLVEL---KLEDNMLTELPAEIGQLKSLV--------ELKLEGNEL 203

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           +++P+EI +   +   +L+ N + ELP E+    SL+ L LS N++   P  I   L SL
Sbjct: 204 TSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEI-GQLKSL 262

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
             LKL++N L ++P++    +  L  L+L  N + S+P       L  L EL L    L 
Sbjct: 263 VELKLEDNMLTELPAE-IGQLKSLVELNLYNNRLTSVP--AEIGQLTSLVELKLEDNMLT 319

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           E P +I +L+ LR L L  N L S+P     LTSLTELDL  N ++++P E+
Sbjct: 320 ELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEI 371


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 243/516 (47%), Gaps = 28/516 (5%)

Query: 33  DEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           DE G      EA+    +++ L L+  N   L +++  L  L  L++  N+L+  PA I 
Sbjct: 34  DEPGTYRDLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIV 93

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL      +N 
Sbjct: 94  ELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQ 153

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  IG L  
Sbjct: 154 LATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQN 212

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L +N++ + P  I    +L E  +  N L+ALP E+G+L  L  L+L  NQL  +
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L L  N L+  P EIG++  L+ L L  N  +T+   +          
Sbjct: 273 PKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ-------- 324

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKL 385
                       + + +   L T+   +    K  +LSL    L+ +P EI +   +  L
Sbjct: 325 -------LKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           DL  N +  LP E+    +L  L L RN++  +P  I   L +L  L L NN L  +P +
Sbjct: 378 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEI-GQLENLQELDLWNNRLTALPKE 436

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  L+ L+LS N + + P+      L  LQ+L L   +L   P +I +L++L+ L 
Sbjct: 437 -IGQLKNLENLELSENQLTTFPKE--IGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLG 493

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LS N L  +P+    L +L  LDL  N    +  E+
Sbjct: 494 LSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 168/539 (31%), Positives = 247/539 (45%), Gaps = 30/539 (5%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 55  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 115 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 175 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 233

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 234 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLT 293

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L+ 
Sbjct: 294 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 353

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L TL         P  +  L++    +  +   TT    I     L      L
Sbjct: 354 LSLGRNQLTTL---------PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLY----NL 400

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L    L+  P EI +   + +LDL  N +  LP E+    +L+ L LS N++  +P  I
Sbjct: 401 GLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  L  L L  N L  +P +    +  LQ L LSYN +  LP+      L +LQ L 
Sbjct: 461 -GQLKKLQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKE--IGQLKNLQMLD 516

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   Q +    +I +L+ L  L+LS N L ++P     L +L  LDL  N ++ LP E+
Sbjct: 517 LCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEI 575



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 243/551 (44%), Gaps = 75/551 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +PNE+ +               +LQ+L L  N +    +++  L  L  
Sbjct: 100 SLDLSENRLVMLPNEIGR-------------LQNLQELGLYKNKLITFPKEIGQLQNLQT 146

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  IG+L  L+ L++  N +  +P EIG    L   +   NQL  LP  
Sbjct: 147 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 206

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           +G+  NL     S N +T+ P+++     + +L+++ N+LT L   +             
Sbjct: 207 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE 266

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I     L +L   +N L   P+ IG L  L  LDL  N+  ++   I    
Sbjct: 267 NQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLK 326

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  +  N L+ LPAE+G+L KL  L L  NQL     E  QL+ L  LDL  N L+ 
Sbjct: 327 NLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTT 386

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L  L L  N L T          P  +  L                E+L 
Sbjct: 387 LPKEIGQLKNLYNLGLGRNQLATF---------PKEIGQL----------------ENL- 420

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                     +EL L    L+A+P EI +   +  L+LS N +   P E+     LQ L 
Sbjct: 421 ----------QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLG 470

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           LS N++   P  I   L  L  L L  N L  +P +    +  LQ+LDL YN      + 
Sbjct: 471 LSYNRLVILPKEI-GQLEKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCYNQFK-TVSK 527

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +L +L L   QL   P +I +L+ L  LDL  N L ++P+    L +L  L L 
Sbjct: 528 EIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLG 587

Query: 530 DNNISALPPEL 540
            N ++ LP E+
Sbjct: 588 TNQLTTLPKEI 598


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 270/541 (49%), Gaps = 44/541 (8%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K     +L+ L L  NN+  L + +  L  L +L++S NK   +P+ + +L  LK LDV 
Sbjct: 28  KLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLKSLKILDVE 87

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL------- 152
            NS+  +P EI     L K + S NQ+K +P ++ +  +L++    NN IT+L       
Sbjct: 88  GNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSISQL 147

Query: 153 ----------------PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                           P +L   +K+  LD+ GN ++ ++   I+    L  LI S N L
Sbjct: 148 QNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATE-ISKLKQLNTLIVSCNNL 206

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  +  L +L + D+  N+I ++ S IS    L    + +N L  +P+++ +L KL 
Sbjct: 207 RKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSDIYQLRKLR 266

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            LD+ SN ++    +  QL +L +L+LS N L  +P  I K+T L++L +  N + ++ +
Sbjct: 267 ELDVGSNDIR-ILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSIST 325

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-----------KELSL 364
           ++    +  +L    ++L E   +         + M     +TS           K L +
Sbjct: 326 NISELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNN-RITSLLPEIAQLNQLKSLVI 384

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS-CASLQTLILSRNKIKDWPDAIL 423
            G +L  IPS +++   +T+LD+ +N I+ +  ++S+    L+ L+LS N+I++ P + L
Sbjct: 385 SGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTS-L 443

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYL 482
             L SL  L +  N +  + +D  K +  L+IL++S NI  L E P     L  L++L +
Sbjct: 444 YQLKSLKELDMRKNKISSLSADISK-LENLEILNISGNI--LDEVPASVYQLRKLKKLDM 500

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           R   L E  ++I +L+ L IL +S N LQ +P     L +L +L++  N +  + PE+  
Sbjct: 501 RSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQ 560

Query: 543 V 543
           +
Sbjct: 561 L 561



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 264/540 (48%), Gaps = 30/540 (5%)

Query: 13  SLNLSNRSLRDVPNEVY-----------KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           SL +S  SL+++P+ VY           KN       D   +   L+KL+L+ N IE++ 
Sbjct: 381 SLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIP 440

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             L  L  L  L++  NK+S L A I +L  L+ L++S N + ++P  +     L K D 
Sbjct: 441 TSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEVPASVYQLRKLKKLDM 500

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
            SN L E+ S + +   L     SNN +  LP  +     + KL++EGNKL  +S   I 
Sbjct: 501 RSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPE-IF 559

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  LI S N L G+P  + +L +L  LD   N+I  + + I     L    +  N 
Sbjct: 560 QLQKLETLIVSGNNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNI 619

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  +P  + KL KL  +++ SN L     E  QL +L VL +S N L  +PP + K+  L
Sbjct: 620 LHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGL 679

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           +KL +  N + ++   +       +L    ++L            +D+     RL    K
Sbjct: 680 KKLDIGNNIISSILPDIHELNQLQVLNVSYNQL------------QDVTPNIYRLR-QLK 726

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L L+   +++   ++ +  E+  LD+S N +QELPP L    S++ L +  N+I     
Sbjct: 727 RLDLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISL-S 785

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           + L+ L  L  + L +N +  VP+     +  L+ L++S N  ++ +    S L HL++L
Sbjct: 786 SDLSQLKQLRKINLSHNQMNAVPA-AINQLSQLEDLNMSNN--NMTKLSGISHLKHLKKL 842

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +   Q++E P  + +L QL++L+++ N++ ++PE    L +L EL+L  +++  +P  L
Sbjct: 843 NISFNQVQEVPFSLCKLHQLKVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSAL 902



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 170/599 (28%), Positives = 281/599 (46%), Gaps = 77/599 (12%)

Query: 12  GSLNLSNRSLRDVPNEVY-----KNFDEAGEG-----DKWWEAVDLQKLILAHNNIE--- 58
            +L +S  +LR +PN+VY     K FD  G           +   L+ LI++ N +    
Sbjct: 197 NTLIVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIP 256

Query: 59  -------KLKE------DLRNLP------LLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                  KL+E      D+R LP       L +LN+S N L ++P++I +L  LK L+V 
Sbjct: 257 SDIYQLRKLRELDVGSNDIRILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQ 316

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL------- 152
            NSI  I   I    +L   + S+N+L E+P ++ +   L      NN ITSL       
Sbjct: 317 SNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQL 376

Query: 153 ----------------PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                           P  +     +++LDV  N +  +S+++      L +L+ S N +
Sbjct: 377 NQLKSLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQI 436

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P ++  L  L  LD+ +N+I S+ + IS   +L    +  N L  +PA + +L KL 
Sbjct: 437 EEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEVPASVYQLRKLK 496

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---- 311
            LD+ SN L E   E  +L  L +L +SNN L  LP  + K+  L+KL + GN L+    
Sbjct: 497 KLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSP 556

Query: 312 ------TLRSSLVNG----PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
                  L + +V+G      P  L  LR +L E    +A   K   ++         + 
Sbjct: 557 EIFQLQKLETLIVSGNNLQGIPNALYNLR-KLKE---LDARNNKITYLSAEICQLKQLQR 612

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L + G  L  IP+ I +  ++ ++++  N++  LP E+S    L+ LI+S NK+ + P  
Sbjct: 613 LVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVP-P 671

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           ++  L  L  L + NN +  +  D   ++  LQ+L++SYN       P    L  L+ L 
Sbjct: 672 VVYKLKGLKKLDIGNNIISSILPD-IHELNQLQVLNVSYNQLQ-DVTPNIYRLRQLKRLD 729

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+  ++     D+ +LQ+L +LD+S N LQ +P     L S+ EL++  N I +L  +L
Sbjct: 730 LQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDL 788



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 273/562 (48%), Gaps = 53/562 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN S   ++ VP+ VYK                L +L + +N I  L   +  L  L +L
Sbjct: 107 LNASCNQIKTVPDAVYK-------------LKSLTELNVGNNLITTLSYSISQLQNLEIL 153

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            VS N L E+P  +  L+ LK LD+  N+I  I  EI     L     S N L+++P+ +
Sbjct: 154 VVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCNNLRKIPNDV 213

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L  F    N IT++  D++   ++  L V  NKL  + ++ I     L EL    
Sbjct: 214 YQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSD-IYQLRKLRELDVGS 272

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ I  L +L  L+L  N +  IPSSI     L E  + +N+++++   + +L 
Sbjct: 273 NDIRILPD-ISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELR 331

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L++ +N+L E     C+L+ L  LD+ NN ++ L PEI ++  L+ L+++G+ L+ 
Sbjct: 332 SLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHSLQE 391

Query: 313 LRSSLVN-------GPTPALLKYLRSR------------LPENEDSEASTTKEDLITM-- 351
           + SS+              +++ + S             L +N+  E  T+   L ++  
Sbjct: 392 IPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKE 451

Query: 352 ----ATRLSVTSKELS----LEGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPE 398
                 ++S  S ++S    LE +N+S      +P+ +++  ++ KLD+  N + E+  E
Sbjct: 452 LDMRKNKISSLSADISKLENLEILNISGNILDEVPASVYQLRKLKKLDMRSNMLTEISSE 511

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +S    L+ L++S NK++D P ++   L +L  L+++ N L+ V  + F+   +  ++  
Sbjct: 512 ISKLEWLEILVVSNNKLQDLPISVY-KLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVS 570

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
             N+  +P      +L  L+EL  R  ++     +I +L+QL+ L +S N L  IP    
Sbjct: 571 GNNLQGIPN--ALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSIC 628

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L  L E+++  N +++LP E+
Sbjct: 629 KLKKLKEINVRSNALTSLPQEI 650



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 194/379 (51%), Gaps = 20/379 (5%)

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           ++D+ G +++ +S   +  +T L  L   KN L+ +P+ I +L  L  LD+ QN+  +IP
Sbjct: 13  EIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIP 72

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           S +    SL    +  N++++LP E+ +L++L  L+   NQ+K       +L+ L+ L++
Sbjct: 73  SCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNV 132

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            NN ++ L   I ++  L  L+++ N L+ + ++L +     LL      +  N  S  +
Sbjct: 133 GNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLD-----IRGNNISSIA 187

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T    L  + T        L +   NL  IP+++++  ++ K D+  N I  +  ++S  
Sbjct: 188 TEISKLKQLNT--------LIVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKL 239

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
             L+ LI+S NK+   P  I   L  L  L + +N +R +P      +  L+IL+LS N 
Sbjct: 240 DQLEILIVSSNKLHTIPSDIY-QLRKLRELDVGSNDIRILPD--ISQLKKLEILNLSCNH 296

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           +  +P +     L  L+EL ++   +    T+I  L+ L +L++S N L  IP     L 
Sbjct: 297 LEKIPSS--IYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLK 354

Query: 522 SLTELDLSDNNISALPPEL 540
           +L +LD+ +N I++L PE+
Sbjct: 355 TLKKLDMGNNRITSLLPEI 373



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 51/459 (11%)

Query: 115 ALVKFDCSSNQL----KELP----SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           +L K+D S+ ++    K++     + L R  NL       N +++LP+ ++    +  LD
Sbjct: 3   SLEKYDASAEEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILD 62

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK   +  + +     L  L    N +  +P  I  L++L +L+   N+I ++P ++
Sbjct: 63  ISQNKFDNIP-SCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAV 121

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  +GNN ++ L   + +L  L  L +  N L+E       L +L +LD+  N
Sbjct: 122 YKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGN 181

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           ++S +  EI K+  L  L+++ N LR +         P  +  LR     +      TT 
Sbjct: 182 NISSIATEISKLKQLNTLIVSCNNLRKI---------PNDVYQLRKLKKFDMRGNKITTV 232

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I+   +L +    L +    L  IPS+I++  ++ +LD+  N I+ L P++S    L
Sbjct: 233 TSDISKLDQLEI----LIVSSNKLHTIPSDIYQLRKLRELDVGSNDIRIL-PDISQLKKL 287

Query: 406 QTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVP 443
           + L LS N ++  P +I                      ++ L SL  L + NN L ++P
Sbjct: 288 EILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIP 347

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
               K +  L+ LD+  N I SL   P  + L  L+ L +    L+E P+ + +L+ L  
Sbjct: 348 PTVCK-LKTLKKLDMGNNRITSLL--PEIAQLNQLKSLVISGHSLQEIPSSVYQLKMLTE 404

Query: 503 LDLSQNSLQSIPEGFKN-LTSLTELDLSDNNISALPPEL 540
           LD+ +N ++ I     N L  L +L LSDN I  +P  L
Sbjct: 405 LDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSL 443



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 21/240 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL + +N I  +  D+  L  L VLNVS+N+L ++   I  L  LK LD+  N I   
Sbjct: 679 LKKLDIGNNIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSP 738

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             ++     L   D S N+L+ELP SL +  ++ +    +N I SL  DL+   ++ K++
Sbjct: 739 LPDVSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKIN 798

Query: 167 VEGNKLTVL----------------SNNL-----IASWTMLTELIASKNLLNGMPETIGS 205
           +  N++  +                +NN+     I+    L +L  S N +  +P ++  
Sbjct: 799 LSHNQMNAVPAAINQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFNQVQEVPFSLCK 858

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L  L++  N I ++P +IS   +L E  + +++L  +P+ LG LSKL  LD+  N L
Sbjct: 859 LHQLKVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSALGHLSKLKVLDIRDNHL 918


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 242/516 (46%), Gaps = 28/516 (5%)

Query: 33  DEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           DE G      EA+    +++ L L+  N   L + +  L  L  L++  N+L+  PA I 
Sbjct: 34  DEPGTYRDLTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIV 93

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL      +N 
Sbjct: 94  ELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQ 153

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  IG L  
Sbjct: 154 LATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQN 212

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L +N++ + P  I    +L E  +  N L+ALP E+G+L  L  L+L  NQL  +
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L L  N L+  P EIG++  L+ L L  N  +T+   +          
Sbjct: 273 PKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ-------- 324

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKL 385
                       + + +   L T+   +    K  +LSL    L+ +P EI +   +  L
Sbjct: 325 -------LKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           DL  N +  LP E+    +L  L L RN++  +P  I   L +L  L L NN L  +P +
Sbjct: 378 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEI-GQLENLQELDLWNNRLTALPKE 436

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  L+ L+LS N + + P+      L  LQ+L L   +L   P +I +L++L+ L 
Sbjct: 437 -IGQLKNLENLELSENQLTTFPKE--IGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLG 493

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LS N L  +P+    L +L  LDL  N    +  E+
Sbjct: 494 LSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 167/539 (30%), Positives = 244/539 (45%), Gaps = 51/539 (9%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 100 SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV 159

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 160 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 219

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +     N +T+LP+++     +  L++  N+LT      I  
Sbjct: 220 ENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKE-IGQ 278

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L   P+ IG L  L  LDL  N+  ++   I    +L +  +  N L
Sbjct: 279 LKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQL 338

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LPAE+G+L KL  L L  NQL     E  QL+ L  LDL  N L+ LP EIG++  L 
Sbjct: 339 ATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLY 398

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L T          P  +  L                E+L           +E
Sbjct: 399 NLGLGRNQLATF---------PKEIGQL----------------ENL-----------QE 422

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+A+P EI +   +  L+LS N +   P E+     LQ L LS N++   P  
Sbjct: 423 LDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKE 482

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           I   L  L  L L  N L  +P +    +  LQ+LDL YN      +     L +L +L 
Sbjct: 483 I-GQLEKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCYNQFK-TVSKEIGQLKNLLQLN 539

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   QL   P +I +L+ L  LDL  N L ++P+    L +L  L L  N ++ LP E+
Sbjct: 540 LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 598



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 246/539 (45%), Gaps = 30/539 (5%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           L+LS ++   +P ++   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 55  LDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 115 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 175 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 233

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 234 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLT 293

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L+ 
Sbjct: 294 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 353

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L TL         P  +  L++    +  +   TT    I     L      L
Sbjct: 354 LSLGRNQLTTL---------PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLY----NL 400

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L    L+  P EI +   + +LDL  N +  LP E+    +L+ L LS N++  +P  I
Sbjct: 401 GLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  L  L L  N L  +P +    +  LQ L LSYN +  LP+      L +LQ L 
Sbjct: 461 -GQLKKLQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKE--IGQLKNLQMLD 516

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   Q +    +I +L+ L  L+LS N L ++P     L +L  LDL  N ++ LP E+
Sbjct: 517 LCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEI 575



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 206/469 (43%), Gaps = 68/469 (14%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 142 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 188

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   N+L  
Sbjct: 189 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 248

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL--------- 179
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +         
Sbjct: 249 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 308

Query: 180 -------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I     L +L  S N L  +P  IG L +L  L L +N++ ++P  I
Sbjct: 309 DLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL NN
Sbjct: 369 GQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++  L  L L+ N L T    +        LK L                
Sbjct: 429 RLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL---------------- 466

Query: 346 EDLITMATRLSVTSKELS----LEGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELP 396
           +DL     RL +  KE+     L+ + LS      +P EI +   +  LDL  N  + + 
Sbjct: 467 QDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVS 526

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            E+    +L  L LS N++   P  I   L +L  L L  N L  +P +
Sbjct: 527 KEIGQLKNLLQLNLSYNQLATLPAEI-GQLKNLYNLDLGTNQLTTLPKE 574


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 233/493 (47%), Gaps = 24/493 (4%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL      +N + +LP ++     + KL++  N+
Sbjct: 115 RLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNR 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LTVL    I     L  L    N L  +P  IG L  L  L L +N++ + P  I    +
Sbjct: 175 LTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLEN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +  N L+ALP E+G+L  L  L+L  NQL  +  E  QL +L  L L  N L+  
Sbjct: 234 LQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG++  L+ L L  N  +T+   +                      + + +   L T
Sbjct: 294 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQ---------------LKNLLQLNLSYNQLAT 338

Query: 351 MATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +   +    K  +LSL    L+ +P EI +   +  LDL  N +  LP E+    +L  L
Sbjct: 339 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 398

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L RN++  +P  I   L +L  L L NN L  +P +    +  L+ L+LS N + + P+
Sbjct: 399 GLGRNQLTTFPKEI-GQLENLQELDLWNNRLTALPKE-IGQLKNLENLELSENQLTTFPK 456

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L  LQ+L L   +L   P +I +L++L+ L LS N L  +P+    L +L  LD
Sbjct: 457 E--IGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLD 514

Query: 528 LSDNNISALPPEL 540
           L  N    +  E+
Sbjct: 515 LCYNQFKTVSKEI 527



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 167/539 (30%), Positives = 246/539 (45%), Gaps = 30/539 (5%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 232 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLT 291

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L+ 
Sbjct: 292 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 351

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L TL         P  +  L++    +  +   TT    I     L      L
Sbjct: 352 LSLGRNQLTTL---------PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLY----NL 398

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L    L+  P EI +   + +LDL  N +  LP E+    +L+ L LS N++  +P  I
Sbjct: 399 GLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 458

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  L  L L  N L  +P +    +  LQ L LSYN +  LP+      L +LQ L 
Sbjct: 459 -GQLKKLQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKE--IGQLKNLQMLD 514

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   Q +    +I +L+ L  L+LS N L ++P     L +L  LDL  N ++ LP E+
Sbjct: 515 LCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEI 573



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 243/551 (44%), Gaps = 75/551 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +PNE+ +               +LQ+L L  N +    +++  L  L  
Sbjct: 98  SLDLSENRLVMLPNEIGR-------------LQNLQELGLYKNKLITFPKEIGQLRNLQT 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  IG+L  L+ L++  N +  +P EIG    L   +   NQL  LP  
Sbjct: 145 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           +G+  NL     S N +T+ P+++     + +L+++ N+LT L   +             
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE 264

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I     L +L   +N L   P+ IG L  L  LDL  N+  ++   I    
Sbjct: 265 NQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLK 324

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  +  N L+ LPAE+G+L KL  L L  NQL     E  QL+ L  LDL  N L+ 
Sbjct: 325 NLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTT 384

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L  L L  N L T          P  +  L                E+L 
Sbjct: 385 LPKEIGQLKNLYNLGLGRNQLTTF---------PKEIGQL----------------ENL- 418

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                     +EL L    L+A+P EI +   +  L+LS N +   P E+     LQ L 
Sbjct: 419 ----------QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLG 468

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           LS N++   P  I   L  L  L L  N L  +P +    +  LQ+LDL YN      + 
Sbjct: 469 LSYNRLVILPKEI-GQLEKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCYNQFK-TVSK 525

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +L +L L   QL   P +I +L+ L  LDL  N L ++P+    L +L  L L 
Sbjct: 526 EIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLG 585

Query: 530 DNNISALPPEL 540
            N ++ LP E+
Sbjct: 586 TNQLTTLPKEI 596



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 206/469 (43%), Gaps = 68/469 (14%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 140 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   N+L  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL--------- 179
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +         
Sbjct: 247 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 306

Query: 180 -------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I     L +L  S N L  +P  IG L +L  L L +N++ ++P  I
Sbjct: 307 DLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEI 366

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL NN
Sbjct: 367 GQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNN 426

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++  L  L L+ N L T    +        LK L                
Sbjct: 427 RLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL---------------- 464

Query: 346 EDLITMATRLSVTSKELS----LEGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELP 396
           +DL     RL +  KE+     L+ + LS      +P EI +   +  LDL  N  + + 
Sbjct: 465 QDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVS 524

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            E+    +L  L LS N++   P  I   L +L  L L  N L  +P +
Sbjct: 525 KEIGQLKNLLQLNLSYNQLATLPAEI-GQLKNLYNLDLGTNQLTTLPKE 572



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 195/415 (46%), Gaps = 43/415 (10%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++++ P  I    +L    + +N L+ LP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L+L  N+L     E  QL+ L  L+L +N L+ LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L T          P  +  L                E+L           +EL+L+ 
Sbjct: 218 ENQLTTF---------PKEIGQL----------------ENL-----------QELNLKW 241

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+A+P EI +   +  L+LS N +   P E+     LQ L L RN++  +P  I   L
Sbjct: 242 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI-GQL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L  N  + V S     +  L  L+LSYN +A+LP       L  LQ+L L R 
Sbjct: 301 KNLQMLDLCYNQFKTV-SKEIGQLKNLLQLNLSYNQLATLP--AEIGQLKKLQDLSLGRN 357

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           QL   P +I +L+ L  LDL  N L ++P+    L +L  L L  N ++  P E+
Sbjct: 358 QLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEI 412


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 227/490 (46%), Gaps = 25/490 (5%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N L+ LP  IG+L  L+ LD+  N +   P  I     L   D S N+L  L
Sbjct: 73  LQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIIL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +GR  NL D     N +T+ P+++     + KL +  N+LT L    I     L  L
Sbjct: 133 PNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE-IGQLKNLQTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N    +P+ IG L  L  L+L  N++ ++P  I    +L + Y+ NN L+  P E+
Sbjct: 192 DLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----- 363
           PL       +    P     LR  + EN         ++       LS+  K+ S     
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPK 370

Query: 364 -------LEGMNL-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
                  L G+NL     S +P EI     +  L L  N ++ +P E+    +L+ L L 
Sbjct: 371 VILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE 430

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
            N+++  P  I   L +L  L L  N L+  P++  + +  LQ LDLS N   + P+   
Sbjct: 431 ANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE-- 486

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
              L +LQ L L+R QL     +I +LQ L+ LDL+ N    +P+    L  L  LDL +
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN 546

Query: 531 NNISALPPEL 540
           N ++ LP E+
Sbjct: 547 NQLTTLPTEI 556



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 197/441 (44%), Gaps = 66/441 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S   +T+LP+++     + +L+++ N LT L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SL 364
            N L TL   +  G    L K YLR+                      RL+V  KE+  L
Sbjct: 218 DNQLATLPVEI--GQLQNLQKLYLRN---------------------NRLTVFPKEIGQL 254

Query: 365 EGMN--------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL------ 410
           + +         L+A+P E+ +   +  L+L  N +   P E+    +LQ L L      
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314

Query: 411 --SRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDG-FKDIPM-----LQILDLSYN 461
              R +I+  +PD+              N  LR+V  +G ++++ +     L++ +LS  
Sbjct: 315 LKERKRIQKLFPDS--------------NLDLREVAENGVYRNLNLAQEEPLKVFELSLE 360

Query: 462 IASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                ++ P       +L+ L L        P +I RL+ L+ L L  N L++IP     
Sbjct: 361 YKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQ 420

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L +L  L+L  N +  LP E+
Sbjct: 421 LKNLEALNLEANELERLPKEI 441



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 10/165 (6%)

Query: 20  SLRDVPNEV--YKNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
            L+++P+E+   KN +    EA E ++  + +    +LQKL L  N ++    ++  L  
Sbjct: 410 GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKK 469

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N+ +  P  IG+L  L++L++  N +  +  EIG    L + D + NQ   L
Sbjct: 470 LQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVL 529

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L      NN +T+LP ++     +  L ++ N+L++
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSL 574


>gi|405958960|gb|EKC25038.1| hypothetical protein CGI_10020952 [Crassostrea gigas]
          Length = 779

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 271/554 (48%), Gaps = 77/554 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KLI++ N+I  + +++ N+  LT L++S N L+ELP  IG L  L  L++S N I  +
Sbjct: 200 LKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYL 259

Query: 107 PDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P+EI +   AL     S NQ+K LP  + +   L   + ++N I +LP++      + +L
Sbjct: 260 PEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQLKNIKRL 319

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ GNKL+  +   I+    +  +  ++N L  +PE + +L  L+ +D+  N I  IP +
Sbjct: 320 DLSGNKLSTAAG--ISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKVIPEN 377

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L  F   +N +S +P  LG+   +  L +  N+L+    +  +LR L V ++++
Sbjct: 378 LHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKKLRSLEVFEMAD 437

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
           N ++ LP     +  LR L + GN L  L           L K L S  L  N  S  S 
Sbjct: 438 NDINALPKTFDFLKFLRVLDVAGNGLNEL----------MLPKTLTSLNLSSNPISLPSV 487

Query: 344 TKEDLITM------ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
             + ++T+      A++++V    L LE + L  +PS +     + KL++  N I+ +P 
Sbjct: 488 DPKSVLTILGEKTWASQMTV----LELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPD 543

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           EL     L+ L +S N++ D PD+ ++++ +L  L    N ++     G   +  L+ ++
Sbjct: 544 ELCKLRLLEELDVSNNELADLPDS-MSNMKNLRKLNASENKIQHF-CPGLCLLHQLEEIN 601

Query: 458 LSYN-IASLPENPPFSSLPHLQEL------------------------------------ 480
           LSYN I  LPEN  F  L  +  L                                    
Sbjct: 602 LSYNNIMELPEN--FGELNKVIRLDLSNNELMGLPEDKWDVLASMLFLDVSKNHINVVPT 659

Query: 481 ---YLRRMQLREA--------PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              YL R+Q+ +A        P DI+++  L +LD+S N L+S+P+    L +LTEL++S
Sbjct: 660 DLPYLYRIQVLKAACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVS 719

Query: 530 DNNISALPPELVSV 543
           DN I + P ++ S+
Sbjct: 720 DNKIKSFPGKMESL 733



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 251/557 (45%), Gaps = 64/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           ++ S   ++  P E++KN +   + +++          L  NN ++KL + + +L  L  
Sbjct: 40  VDFSTNGIKAFPQEIWKNEEIMNKANRF----------LGENNRLKKLPKTISDLDNLEF 89

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +++ +N L  LP  I ++  LK L    N +  +P  I  A +L      +N++K LP +
Sbjct: 90  IDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAPSLEYLYAQNNKIKALPKT 149

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +C  L     + N I S+ + + +    + L +  N+L  L +  + +   L +LI S
Sbjct: 150 INKCPALVLIDLTENVIRSVKKTIYEVG--ATLILSKNRLVELPDATVKN-PALKKLIVS 206

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N ++ +P+ I ++  L  LDL  N +  +P+ I     L    +  N +  LP E+  L
Sbjct: 207 GNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYLPEEITTL 266

Query: 253 S-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              L  L    NQ+K    E  +L RL VL+L++N +  LP    ++  +++L L+GN L
Sbjct: 267 HFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQLKNIKRLDLSGNKL 326

Query: 311 RTLR--SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            T    S L +     L +   + LP           EDL  + + +S+      + G  
Sbjct: 327 STAAGISKLKSVEHIGLARNSLTALP-----------EDLPNLKSLVSI-----DVTGNY 370

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           +  IP  + + G +     S N I  +P  L     +  L +S+N+++  P   +  L S
Sbjct: 371 IKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQD-MKKLRS 429

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILD-------------------LSYNIASLPENP 469
           L   ++ +N +  +P   F  +  L++LD                   LS N  SLP   
Sbjct: 430 LEVFEMADNDINALPK-TFDFLKFLRVLDVAGNGLNELMLPKTLTSLNLSSNPISLPSVD 488

Query: 470 PFSSLPHLQE---------LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           P S L  L E         L L  ++L E P+ +  ++ L+ L++  N ++ IP+    L
Sbjct: 489 PKSVLTILGEKTWASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCKL 548

Query: 521 TSLTELDLSDNNISALP 537
             L ELD+S+N ++ LP
Sbjct: 549 RLLEELDVSNNELADLP 565



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 198/454 (43%), Gaps = 70/454 (15%)

Query: 14  LNLSNRSLRDVPNEVY--KNFDEAG-EGDKWWEAVDLQKLI------LAHNNIEKLKEDL 64
           L L++  +  +P+  Y  KN       G+K   A  + KL       LA N++  L EDL
Sbjct: 296 LELADNQIETLPDNFYQLKNIKRLDLSGNKLSTAAGISKLKSVEHIGLARNSLTALPEDL 355

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  L  ++V+ N +  +P  + ++  LKS   S N I  IP+ +G    + +   S N
Sbjct: 356 PNLKSLVSIDVTGNYIKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKN 415

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK------------- 171
           +L+ LP  + +  +L  F+ ++N I +LP+       +  LDV GN              
Sbjct: 416 RLQGLPQDMKKLRSLEVFEMADNDINALPKTFDFLKFLRVLDVAGNGLNELMLPKTLTSL 475

Query: 172 -----------------LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
                            LT+L     AS   + EL + K  L  +P T+  +  L +L++
Sbjct: 476 NLSSNPISLPSVDPKSVLTILGEKTWASQMTVLELESIK--LEEVPSTLSHMKLLKKLNM 533

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  IP  +     L E  + NN L+ LP  +  +  L  L+   N+++ +C   C 
Sbjct: 534 RSNLIKVIPDELCKLRLLEELDVSNNELADLPDSMSNMKNLRKLNASENKIQHFCPGLCL 593

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L +L  ++LS N++  LP   G++  + +L L+ N L                      L
Sbjct: 594 LHQLEEINLSYNNIMELPENFGELNKVIRLDLSNNELMG--------------------L 633

Query: 334 PENE-DSEAS-----TTKEDLITMATRLSVTSKELSLEGM--NLSAIPSEIWEAGEITKL 385
           PE++ D  AS      +K  +  + T L    +   L+    +L+ +P +I +   +  L
Sbjct: 634 PEDKWDVLASMLFLDVSKNHINVVPTDLPYLYRIQVLKAACNDLTCLPGDIIKMVGLEVL 693

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           D+S N ++ LP  +    +L  L +S NKIK +P
Sbjct: 694 DVSDNLLESLPDSICKLPNLTELNVSDNKIKSFP 727



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 9/247 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G+K W A  +  L L    +E++   L ++ LL  LN+  N +  +P  + +L +L+ LD
Sbjct: 497 GEKTW-ASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCKLRLLEELD 555

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           VS N +  +PD + +   L K + S N+++     L     L +   S N I  LPE+  
Sbjct: 556 VSNNELADLPDSMSNMKNLRKLNASENKIQHFCPGLCLLHQLEEINLSYNNIMELPENFG 615

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDL 214
           + +K+ +LD+  N+L  L  +    W +L  ++    SKN +N +P  +  L R+  L  
Sbjct: 616 ELNKVIRLDLSNNELMGLPED---KWDVLASMLFLDVSKNHINVVPTDLPYLYRIQVLKA 672

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEA 272
             N +  +P  I     L    + +N L +LP  + KL  L  L++  N++K +   +E+
Sbjct: 673 ACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVSDNKIKSFPGKMES 732

Query: 273 CQLRLSV 279
            + R +V
Sbjct: 733 LKQRCTV 739



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 7/183 (3%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           + L   +L A+P  I++   + +L    N ++ LP  ++   SL+ L    NKIK  P  
Sbjct: 90  IDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAPSLEYLYAQNNKIKALPKT 149

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I     +L  + L  N +R V    ++   +   L LS N +  LP+    +  P L++L
Sbjct: 150 I-NKCPALVLIDLTENVIRSVKKTIYE---VGATLILSKNRLVELPDATVKN--PALKKL 203

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +    +   P +I  +  L  LDLS N L  +P     L  L  L++S N I  LP E+
Sbjct: 204 IVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYLPEEI 263

Query: 541 VSV 543
            ++
Sbjct: 264 TTL 266



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 3/141 (2%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAI 87
           Y N  E  E   + E   + +L L++N +  L ED  + L  +  L+VS N ++ +P  +
Sbjct: 604 YNNIMELPEN--FGELNKVIRLDLSNNELMGLPEDKWDVLASMLFLDVSKNHINVVPTDL 661

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             L+ ++ L  + N +  +P +I     L   D S N L+ LP S+ +  NL++   S+N
Sbjct: 662 PYLYRIQVLKAACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVSDN 721

Query: 148 CITSLPEDLADCSKMSKLDVE 168
            I S P  +    +   ++VE
Sbjct: 722 KIKSFPGKMESLKQRCTVNVE 742


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 227/490 (46%), Gaps = 25/490 (5%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N L+ LP  IG+L  L+ LD+  N +   P  I     L   D S N+L  L
Sbjct: 73  LQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIIL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +GR  NL D     N +T+ P+++     + KL +  N+LT L    I     L  L
Sbjct: 133 PNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE-IGQLKNLQTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N    +P+ IG L  L  L+L  N++ ++P  I    +L + Y+ NN L+  P E+
Sbjct: 192 DLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----- 363
           PL       +    P     LR  + EN         ++       LS+  K+ S     
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLRE-VAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPK 370

Query: 364 -------LEGMNL-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
                  L G+NL     S +P EI     +  L L  N ++ +P E+    +L+ L L 
Sbjct: 371 VILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE 430

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
            N+++  P  I   L +L  L L  N L+  P++  + +  LQ LDLS N   + P+   
Sbjct: 431 ANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE-- 486

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
              L +LQ L L+R QL     +I +LQ L+ LDL+ N    +P+    L  L  LDL +
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN 546

Query: 531 NNISALPPEL 540
           N ++ LP E+
Sbjct: 547 NQLTTLPTEI 556



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 42/415 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 197/441 (44%), Gaps = 66/441 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S   +T+LP+++     + +L+++ N LT L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SL 364
            N L TL   +  G    L K YLR+                      RL+V  KE+  L
Sbjct: 218 DNQLATLPVEI--GQLQNLQKLYLRN---------------------NRLTVFPKEIGQL 254

Query: 365 EGMN--------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL------ 410
           + +         L+A+P E+ +   +  L+L  N +   P E+    +LQ L L      
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314

Query: 411 --SRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDG-FKDIPM-----LQILDLSYN 461
              R +I+  +PD+              N  LR+V  +G ++++ +     L++ +LS  
Sbjct: 315 LKERKRIQKLFPDS--------------NLDLREVAENGVYRNLNLAQEEPLKVFELSLE 360

Query: 462 IASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                ++ P       +L+ L L        P +I RL+ L+ L L  N L++IP     
Sbjct: 361 YKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQ 420

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L +L  L+L  N +  LP E+
Sbjct: 421 LKNLEALNLEANELERLPKEI 441



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 10/165 (6%)

Query: 20  SLRDVPNEV--YKNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
            L+++P+E+   KN +    EA E ++  + +    +LQKL L  N ++    ++  L  
Sbjct: 410 GLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKK 469

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N+ +  P  IG+L  L++L++  N +  +  EIG    L + D + NQ   L
Sbjct: 470 LQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVL 529

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L      NN +T+LP ++     +  L ++ N+L++
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSL 574


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 200/382 (52%), Gaps = 18/382 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  L
Sbjct: 73  LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L    I     L  L
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKE-IGQLQNLKTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
            +    L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E+
Sbjct: 192 NSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
            L TL         P  ++ L++ R+ + ++++ +T  ++++ + + L V    L+L   
Sbjct: 312 QLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQV----LALGSN 357

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            LS +P EI +   +  L L  N +  LP E+    +LQ L L  N++  +P  I   L 
Sbjct: 358 RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI-RQLK 416

Query: 428 SLSCLKLDNNPLRQVPSDGFKD 449
           +L  L L  NPL      GF+D
Sbjct: 417 NLQELHLYLNPLSSKEKKGFED 438



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 192/398 (48%), Gaps = 38/398 (9%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +L++   KLT L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL   
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L  L+     L+ LP EIG++  L+ L L  N L TL   +  G    L  
Sbjct: 179 PKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL-- 234

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWE 378
                             E L+    R++   KE         L L    L+ +P EI +
Sbjct: 235 ------------------EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQ 276

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + +LDL +N +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN 
Sbjct: 277 LQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQ 335

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P +  + +  LQ+L L  N +++LP+      L +LQ L L   QL   P +I +L
Sbjct: 336 LTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVLGLISNQLTTLPKEIGQL 392

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           Q L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 393 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 185/401 (46%), Gaps = 51/401 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+++ L  +P E+              +  +LQ+L L+ N++  L +++  L  L  L
Sbjct: 76  LNLNSQKLTTLPKEI-------------GQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L + D   NQL  LP  +
Sbjct: 123 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 182

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL    +    +T+LP+++ +   +  L++  N+LT L    I     L  L+  +
Sbjct: 183 GQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRE 241

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ IG L  L  LDLHQN++ ++P  I    +L    +  N L+ LP E+G+L 
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL+ L VLDL NN L+ LP E+ ++ +L+ L L  N L T
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L                                   I     L V    L L    L+ +
Sbjct: 362 LPKE--------------------------------IGQLQNLQV----LGLISNQLTTL 385

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           P EI +   + +L L  N +   P E+    +LQ L L  N
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 203/430 (47%), Gaps = 44/430 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +++LD+ +  +  +P EIG    L + + +S +L  LP  +G+  NL +   S N +T+L
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 109

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +LD+  N+L  L    I     L EL  + N L  +P+ I  L  L  L
Sbjct: 110 PKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 168

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DLH+N++ ++P  I    +L         L+ LP E+G+L  L TL+L  NQL     E 
Sbjct: 169 DLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 228

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L +L L  N ++ LP EIG++  L+ L L  N L TL         P  +  L++
Sbjct: 229 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL---------PKEIGQLQN 279

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       + L L    L+ +P EI +   + +L L  N 
Sbjct: 280 ---------------------------LQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ 312

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP E+    +L+ L L  N++   P  +L  L SL  L L +N L  +P +    + 
Sbjct: 313 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL-RLQSLQVLALGSNRLSTLPKE-IGQLQ 370

Query: 452 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            LQ+L L S  + +LP+      L +LQEL L   QL   P +I +L+ L+ L L  N L
Sbjct: 371 NLQVLGLISNQLTTLPKE--IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428

Query: 511 QSI-PEGFKN 519
            S   +GF++
Sbjct: 429 SSKEKKGFED 438



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 187/400 (46%), Gaps = 66/400 (16%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           ++ +   T L + L +  K+  LD+   KLT+L                        P+ 
Sbjct: 31  ESESGTYTDLAKALQNPLKVRTLDLRYQKLTIL------------------------PKE 66

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH 
Sbjct: 67  IGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 126

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL        
Sbjct: 127 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL-------- 178

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++                   + T  S+ ++        L+ +P EI E   
Sbjct: 179 -PKEIGQLQN-------------------LKTLNSIVTQ--------LTTLPKEIGELQN 210

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  
Sbjct: 211 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTT 269

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ L
Sbjct: 270 LPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           R+LDL  N L ++P+    L SL  L L  N +S LP E+
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 206/418 (49%), Gaps = 44/418 (10%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  E Y++  +A         +D++ LIL+   +  L ++++ L  L +L++ HN+L+ 
Sbjct: 31  EVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP  +G+  NL + 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T+LP+++     + +LD+  N+L  L    I     L EL  + N L  +P+ 
Sbjct: 146 DLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+G+L  L TL+L  
Sbjct: 205 IRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  +L+ L +L L  N ++ LP EIG++  L++L L  N L TL        
Sbjct: 265 NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL-------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++                            +EL L+   L+ +P EI +   
Sbjct: 317 -PKEIGQLQN---------------------------LQELCLDENQLTTLPKEIEQLQN 348

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +  LDL  N +  LP E+    +LQ L L  N++  +P  I   L +L  L L  NPL
Sbjct: 349 LRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI-RQLKNLQELHLYLNPL 405



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 178/354 (50%), Gaps = 19/354 (5%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L E  +  N+L+ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL         P  +  L++    + +S   TT    I     L    +EL L   
Sbjct: 173 NRLATL---------PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL----QELDLHRN 219

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   +  L+L    +  LP E+    +L+TL L  N++   P  I   L 
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQ 278

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L  L L  N +  +P +    +  LQ LDL  N + +LP+      L +LQEL L   Q
Sbjct: 279 NLEILVLRENRITALPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQ 335

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +LQ LR+LDL  N L ++P+    L +L EL L +N ++  P E+
Sbjct: 336 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N +   P  +   L +L  L L++  L  +P +    +  LQ LDLS+N + +LP+
Sbjct: 100 DLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPK 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+  + L +L ELD
Sbjct: 158 E--VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 215

Query: 528 LSDNNISALPPEL 540
           L  N ++ LP E+
Sbjct: 216 LHRNQLTTLPKEI 228



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              E  +L+ L+L  N I  L +++  L  L  
Sbjct: 259 TLNLLDNQLTTLPKEI-------------GELQNLEILVLRENRITALPKEIGQLQNLQR 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +  N +  +P EI     L   D  +NQL  LP  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL +     N +T+ P+++     + +L +  N L+
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 406



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  L +  N+L+ LP  I +L  L+ LD+  N +  
Sbjct: 302 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 362 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 170/518 (32%), Positives = 242/518 (46%), Gaps = 57/518 (11%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++ W+ +   +L L +  + +L   +  L  L  L++S+N L+ LP  I  L  L+ LD+
Sbjct: 13  EEAWQ-LQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDL 71

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             NS+  +P  I S T L   D   NQL  LP ++     L     SNN  TSLP  + D
Sbjct: 72  FSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGD 131

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            +++  L +  NKLT L    I     L EL  S N    +P  I +L++L  LDL +N 
Sbjct: 132 LAQLQVLGLHANKLTKLPAE-IGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNH 190

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------CVEA 272
              +P +I+G   L +  +  N L+A+PA +  LS+L TLDL +NQ+ E       C+E 
Sbjct: 191 FTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIEL 250

Query: 273 CQLRLS------------------VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            +L LS                  VLDLS N LS LP  IG +T L+KL +  N L TL 
Sbjct: 251 QELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLP 310

Query: 315 SS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            S   L N  T  L +   + LPE        +  DLI +        +EL      L+ 
Sbjct: 311 ESIGGLSNLQTFHLYRNQLTILPE--------SIGDLIQL--------RELFAYQNQLTN 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELP-------PELSSCASLQTLILSRNKIKDWPDAILT 424
           +P  I     + KL+LS N +  LP         LSS   L  L LS N+I   P+AI  
Sbjct: 355 LPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAI-G 413

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
           +L+ L  L L  N L+ +P+     +  LQ L +S+N +  LPE    + L  LQ+L L 
Sbjct: 414 ALTQLKELVLVCNHLKDLPA-SIGSLTQLQFLYVSHNPLTHLPET--INGLSQLQKLNLE 470

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
              L + P  I  L  L+ L LS+N    +P     LT
Sbjct: 471 HNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGALT 508



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 198/415 (47%), Gaps = 68/415 (16%)

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L ELP+++G    L     SNN +T+LPE+++  +++  LD+  N L+ L          
Sbjct: 30  LTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSAL---------- 79

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                         P  I SL++L  LDL +N++ ++P +IS    L +  + NN  ++L
Sbjct: 80  --------------PLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSL 125

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +G L++L  L LH+N+L +   E  C + L  LDLSNN+ + LP  I  +  L+ L 
Sbjct: 126 PVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLD 185

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L+ N                      + LPE  +  A   K DL                
Sbjct: 186 LSRNHF--------------------TDLPEAINGLAHLCKLDL---------------- 209

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L+AIP+ I    ++  LDL  N I ELP  + SC  LQ L LSRN + +   AI  
Sbjct: 210 SYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAI-G 268

Query: 425 SLSSLSCLKLDNNPLRQVP-SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
           SL++L  L L  N L  +P S G+  +  LQ L +  N + +LPE+     L +LQ  +L
Sbjct: 269 SLTNLKVLDLSQNQLSHLPKSIGY--LTQLQKLYIERNKLITLPES--IGGLSNLQTFHL 324

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            R QL   P  I  L QLR L   QN L ++P   + LT L +L+LS N ++ LP
Sbjct: 325 YRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLP 379



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L    L+ +P EI    ++  LDL  NS+  LP  + S   L+ L L  N++ + P
Sbjct: 44  QKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLP 103

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           +AI + L+ L  L L NN    +P     D+  LQ+L L  N +  LP       L HL+
Sbjct: 104 EAI-SCLTQLKKLDLSNNHFTSLPV-VIGDLAQLQVLGLHANKLTKLPAE--IGCLVHLK 159

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L      + P  I  L QL+ LDLS+N    +PE    L  L +LDLS N ++A+P 
Sbjct: 160 ELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPA 219

Query: 539 ELVSV 543
            + S+
Sbjct: 220 VISSL 224



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%)

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL LR + L E PT I  L QL+ LDLS N L ++PE    LT L +LDL  N++SALP 
Sbjct: 22  ELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPL 81

Query: 539 ELVSV 543
            + S+
Sbjct: 82  GICSL 86



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 444 SDGFKDIP-------MLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDIL 495
           + G++D          LQ  +L+     L E P    +L  LQ+L L    L   P +I 
Sbjct: 2   AQGYQDAERRIEEAWQLQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEIS 61

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L QLR LDL  NSL ++P G  +LT L  LDL +N ++ LP
Sbjct: 62  ALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLP 103


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 214/397 (53%), Gaps = 20/397 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 132 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 192 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 249

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 250 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLH 309

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 310 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 360

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 361 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQL 415

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            +LQ L L  N++  +P  I   L +L  L L  NPL
Sbjct: 416 QNLQELCLDENQLTTFPKEI-RQLKNLQELHLYLNPL 451



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 219/475 (46%), Gaps = 84/475 (17%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +                       LD+  N LT L                
Sbjct: 112 EIGQLRNLQE-----------------------LDLSFNSLTTL---------------- 132

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 133 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 184

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 185 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 244

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 245 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQW 282

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   + +LDL +N +  LP E+    +LQ L L  N++   P  
Sbjct: 283 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 342

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L +L  L LDNN L  +P +  + +  LQ+L L  N +++LP+      L +LQ L
Sbjct: 343 I-EQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVL 398

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L   QL   P +I +LQ L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 399 GLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 453



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 193/400 (48%), Gaps = 43/400 (10%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           ++ +   T L + L +  K+  LD+   KLT+L    I     L EL  S N L  +P+ 
Sbjct: 31  ESESGTYTDLAKALQNPLKVRTLDLRYQKLTILPKE-IGQLRNLQELDLSFNSLTTLPKE 89

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +G L  L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH 
Sbjct: 90  VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 149

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL        
Sbjct: 150 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL-------- 201

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++                            K L+L    L+ +P EI E   
Sbjct: 202 -PKEIGQLQN---------------------------LKTLNLIVTQLTTLPKEIGELQN 233

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  
Sbjct: 234 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTT 292

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ L
Sbjct: 293 LPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNL 349

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           R+LDL  N L ++P+    L SL  L L  N +S LP E+
Sbjct: 350 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 389



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 230 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 289

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 290 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 349

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 350 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 408

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 449



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 325 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 385 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 444

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 445 HLYLNPLS 452



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 348 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 407

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 408 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 453


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
            kowalevskii]
          Length = 1970

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 258/551 (46%), Gaps = 56/551 (10%)

Query: 14   LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLILAHNNIEKLKEDLRN 66
            L+LSN  L   P  +   KN D +      +        +L +L +++N + +L EDL  
Sbjct: 744  LHLSNNKLTIFPTNIGNVKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTG 803

Query: 67   LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
            L  L  L++S NK+ E+P+ + ELH L +L+   N++  +P E+ + T L   D S N L
Sbjct: 804  LSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHL 863

Query: 127  KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN--LIASWT 184
              LP        L       N +  LP D+     +  L    N +T +SNN  +++   
Sbjct: 864  SCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELE 923

Query: 185  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            ML     S N +  +P+T G L  L  LDL  N+I +IPSSIS    L +F +  N LS 
Sbjct: 924  MLD---ISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSE 980

Query: 245  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP  +G L  L  LD+  NQ+         L+ L+ L+L +N L+ + P IG +  L +L
Sbjct: 981  LPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEEL 1040

Query: 304  LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-----------EDLITMA 352
                N L ++   +    T   L+ +  R  E ED   +  +           E  + + 
Sbjct: 1041 HARNNKLTSIPREIKRITT---LRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRIL 1097

Query: 353  TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                V+++ + L+G  L+ +P  I     + +LDL  N +  LP E+S    L+ + LS 
Sbjct: 1098 EPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSN 1157

Query: 413  NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
            N + D PD I+++L  +S L L NN + + P                             
Sbjct: 1158 NLLSDVPD-IISTLPKMSTLVLRNNNINEFPC---------------------------- 1188

Query: 473  SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            S+  L+EL +    ++  PTDI  L QL  LD+S NSL+ +P+    +T+L +L+LSDN 
Sbjct: 1189 SIVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQ 1248

Query: 533  ISALPPELVSV 543
            I ++  ++ S+
Sbjct: 1249 IVSISTDIRSL 1259



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 240/486 (49%), Gaps = 42/486 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V++++   ++ LP  I     +KS+D+  N++ ++PD+      L K + S N  + +P+
Sbjct: 13  VIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPT 72

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +     L+    + N +  +P +L + + +++L +  NK+  +S   I+    L +   
Sbjct: 73  PIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPG-ISKLKNLIKFNI 131

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N++  +P  IG L  L  +D+ +N++  IP S+ G   LA+F +  N +S +P E+G 
Sbjct: 132 KDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGC 191

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L++L   ++ +NQ+K+      +L+ L   D+++N L+ LP +I  M  L++L LTGN L
Sbjct: 192 LTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNL 251

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           + +   +       + +Y      E E+ E          +   + V S+++ L   +L+
Sbjct: 252 KDIPRHIYEKGIVEIRQYW-----ETEEVE----------LMKDIDVLSEDIKLGSRSLT 296

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +PS I +   +  L++S NS+  LP EL+    L+ L LS N  +  P  +   + ++ 
Sbjct: 297 YLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHV-CKIQNIQ 355

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF------------------ 471
            L + NN L Q P+    DI  L+ LDLS N I+ +P++  +                  
Sbjct: 356 KLNMRNNMLTQFPN----DIDNLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKVPKS 411

Query: 472 -SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
            S L  L+E  L    +      I  L QL ILD+  N L+ +P  F NLTSL +LDL +
Sbjct: 412 ISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHE 471

Query: 531 NNISAL 536
           N ++ +
Sbjct: 472 NKLNEI 477



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 257/569 (45%), Gaps = 114/569 (20%)

Query: 39   DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
            D +     L++L +  N +E L  D+  L  L +L  S N ++E+      L  L+ LD+
Sbjct: 868  DDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDI 927

Query: 99   SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            S N I +IPD  G    L + D S NQ++ +PSS+ +   L+ F    N ++ LP+ + D
Sbjct: 928  SHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGD 987

Query: 159  CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
               + +LD+ GN++T+                        +PETIG L  L +L+L  N+
Sbjct: 988  LQLLQQLDISGNQITM------------------------VPETIGVLKELTKLELGDNQ 1023

Query: 219  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ---- 274
            + S+  +I   C L E +  NN L+++P E+ +++ L T+ L  N++++  +  C+    
Sbjct: 1024 LTSMTPNIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQ 1083

Query: 275  -----------------------LRLS------------------VLDLSNNSLSGLPPE 293
                                   +RL                    LDL NN L  LP E
Sbjct: 1084 LLSNYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLE 1143

Query: 294  IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
            I ++  L K+ L+ N L  +   +   P  + L    + + E   S              
Sbjct: 1144 ISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCS-------------- 1189

Query: 354  RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP----------------- 396
               V+ KEL +   N+  IP++I    ++ +LD+S NS++ELP                 
Sbjct: 1190 --IVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDN 1247

Query: 397  ------PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                   ++ S  +L+   +S+NK+ + PD I  +L +L  L L +N ++ +PS     +
Sbjct: 1248 QIVSISTDIRSLTNLKVFDISKNKLTEIPDEI-GNLVALERLYLSSNTIQIIPS-SIARL 1305

Query: 451  PMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              L  L++S NI S +P+     +L  LQ L L R Q+++    + ++ +L +LD+S N 
Sbjct: 1306 TNLSELNISNNIISCIPDG--IYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHND 1363

Query: 510  LQSIPEGFKNLTSLTELDLSDN-NISALP 537
            L  IP   KNL  L  LDL  N  +++LP
Sbjct: 1364 LSIIPLSIKNLQMLEILDLQGNAKLTSLP 1392



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 266/554 (48%), Gaps = 59/554 (10%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            SL++S+ ++ D+P+++              +   LQ L L+ N I ++   + +L  L+ 
Sbjct: 511  SLDISDNAVIDIPSDI-------------GQMTSLQNLNLSGNRITEIPSTVCDLYQLSH 557

Query: 73   LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
            LN+  NK+ +LP  IG LH L S DVS N+I +IP  +G+   L KF  S+N+L  LP +
Sbjct: 558  LNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRA 617

Query: 133  LGRCLNLSDFKASNNCITSLPEDLAD---------CSKMSKLDVE---------GNKLTV 174
            + + +NL+D +   N IT   ED+             ++ K+D +          +++T+
Sbjct: 618  MHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKIDRDLLKDFDRSTTDEITI 677

Query: 175  LSNN------LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
               +      +I  +T L +L  S N +   P  +  L++L  LDL  N    IP SI  
Sbjct: 678  TQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQ 737

Query: 229  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSL 287
               L   ++ NN L+  P  +G +     LDL +N++ E+ C       LS L++SNN L
Sbjct: 738  LGKLKILHLSNNKLTIFPTNIGNVK---NLDLSANKITEFSCPFPNFSNLSRLNVSNNIL 794

Query: 288  SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
            + LP ++  +++L  L ++ N +  +         P+ +  L S    N  +        
Sbjct: 795  TQLPEDLTGLSSLEDLDISDNKIDEI---------PSTVSELHSLTNLNAHANNLNVVPV 845

Query: 348  LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
             +   T L      L L   +LS +P +     ++ +L +  N ++ LP ++     LQ 
Sbjct: 846  ELCTLTNLCY----LDLSKNHLSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQL 901

Query: 408  LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
            L  S+N I +  +     LS L  L + +N + ++P D F  +  L  LDLS N I ++P
Sbjct: 902  LQASQNCITEISNNTCI-LSELEMLDISHNQITEIP-DTFGKLKTLNELDLSGNQIRTIP 959

Query: 467  ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
             +   S L  L +  +RR QL E P  I  LQ L+ LD+S N +  +PE    L  LT+L
Sbjct: 960  SS--ISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKL 1017

Query: 527  DLSDNNISALPPEL 540
            +L DN ++++ P +
Sbjct: 1018 ELGDNQLTSMTPNI 1031



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 258/572 (45%), Gaps = 54/572 (9%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIE 58
           +T   LNLS    R +P  +           N ++  E   + +    L +L L  N I+
Sbjct: 55  KTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQ 114

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           ++   +  L  L   N+  N ++E+PA IG+L  L+ +D+S N + +IP  +     L K
Sbjct: 115 EISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAK 174

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           FD S N +  +P  +G    L  F  SNN +  +P  +     + + D+  N+LT L  +
Sbjct: 175 FDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRD 234

Query: 179 LIASWTMLTELIASKNLLNGMP-----------------------ETIGSLSRLIRLDLH 215
            I S   L EL  + N L  +P                       + I  LS  I+L   
Sbjct: 235 -IKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLG-- 291

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
              +  +PS I    ++    + NN+L +LP EL KL +L  L+L  N  ++  V  C++
Sbjct: 292 SRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKI 351

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------VNGPTPALLKY 328
           + +  L++ NN L+  P +I     L++L L+GN +  +  S       ++     L K 
Sbjct: 352 QNIQKLNMRNNMLTQFPNDID---NLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKV 408

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLD 386
            +S    +E  E + +   +  ++  +   ++ L L+  N  L  +P + W    + KLD
Sbjct: 409 PKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLD 468

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N + E+   +S   +L+ L LSRN +   P      L  +  L + +N +  +PSD 
Sbjct: 469 LHENKLNEISERISQLQNLRELDLSRNNLSVVPSGCF--LPQIHSLDISDNAVIDIPSD- 525

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ L+LS N I  +P       L  L  L L++ ++ + P +I RL  L   D+
Sbjct: 526 IGQMTSLQNLNLSGNRITEIPST--VCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDV 583

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           S N++  IP    NL  LT+  +S+N +  LP
Sbjct: 584 SDNTIDEIPSTVGNLGKLTKFIISNNELDTLP 615



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 250/554 (45%), Gaps = 65/554 (11%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           DK+ +   LQKL L+ N+   +   + +L  LT L+V+ N L+E+P  +  +  L  L +
Sbjct: 49  DKFADLKTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSL 108

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N I +I   I     L+KF+   N + E+P+ +G+  +L +   S N +T +P+ +  
Sbjct: 109 FKNKIQEISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDG 168

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              ++K D+  N ++V+    I   T L     S N +  +P TIG L  L R D+  NR
Sbjct: 169 LVHLAKFDISQNHVSVIPGE-IGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNR 227

Query: 219 ILSIPSSISGCCSLAEFYM-GNN------------------------------------- 240
           + S+P  I     L E  + GNN                                     
Sbjct: 228 LTSLPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSED 287

Query: 241 ------ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
                 +L+ LP+ +G+ + +  L++ +N L    +E  +L +L  L+LS+N    +P  
Sbjct: 288 IKLGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVH 347

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           + K+  ++KL +  N L    + + N     L     S +P++   +    K D+     
Sbjct: 348 VCKIQNIQKLNMRNNMLTQFPNDIDNLKQLDLSGNSISVIPDS--CQYPLAKLDI--SDN 403

Query: 354 RLSVTSKELS----LEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           +L+   K +S    LE  NLS      +   I E  ++  LD+  N ++ELP +  +  S
Sbjct: 404 KLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTS 463

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L L  NK+ +  + I + L +L  L L  N L  VPS  F  +P +  LD+S N + 
Sbjct: 464 LNKLDLHENKLNEISERI-SQLQNLRELDLSRNNLSVVPSGCF--LPQIHSLDISDNAVI 520

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P +     +  LQ L L   ++ E P+ +  L QL  L+L +N +  +P     L +L
Sbjct: 521 DIPSD--IGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNL 578

Query: 524 TELDLSDNNISALP 537
              D+SDN I  +P
Sbjct: 579 LSFDVSDNTIDEIP 592



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 261/587 (44%), Gaps = 98/587 (16%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--EGDKWWEAVDLQKLILAHNNIEKL 60
           R +K+      L+L+  +L+D+P  +Y    E G  E  ++WE  +++ +     +I+ L
Sbjct: 233 RDIKSMIELKELSLTGNNLKDIPRHIY----EKGIVEIRQYWETEEVELM----KDIDVL 284

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ED++         +    L+ LP+ IG+   +K+L++S NS+M +P E+     L + +
Sbjct: 285 SEDIK---------LGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELN 335

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N  +++P  + +  N+      NN +T  P D+ +   + +LD+ GN ++V+ +   
Sbjct: 336 LSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQFPNDIDN---LKQLDLSGNSISVIPD--- 389

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +    L +L  S N L  +P++I  L  L   +L  N I  +   I     L    + NN
Sbjct: 390 SCQYPLAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNN 449

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-----------LSV---------- 279
            L  LP +   L+ L  LDLH N+L E      QL+           LSV          
Sbjct: 450 KLEELPLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVPSGCFLPQI 509

Query: 280 --LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LD+S+N++  +P +IG+MT+L+ L L+GN +  + S++ +    + L   ++++P+  
Sbjct: 510 HSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPK-- 567

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQEL 395
                        +   +      LS +  +  +  IPS +   G++TK  +S N +  L
Sbjct: 568 -------------LPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTL 614

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI----- 450
           P  +    +L  L +  N I +  + +      L  L      L ++  D  KD      
Sbjct: 615 PRAMHKLVNLNDLQIHGNPITEPTEDVCK--QGLDALHFYWEELDKIDRDLLKDFDRSTT 672

Query: 451 --------------PM------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
                         PM      L+ LD S N IA+ P     S L  L+EL L     +E
Sbjct: 673 DEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVE--LSQLNKLEELDLSDNIFQE 730

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            P  I +L +L+IL LS N L   P    N+ ++  LDLS N I+  
Sbjct: 731 IPVSIFQLGKLKILHLSNNKLTIFP---TNIGNVKNLDLSANKITEF 774



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 38/261 (14%)

Query: 14   LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            L++SN +++ +P +++  +              L +L ++ N++ +L + L  +  L  L
Sbjct: 1196 LDISNNNIQIIPTDIHTLYQ-------------LNRLDVSSNSLRELPDTLYKVTTLVQL 1242

Query: 74   NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            N+S N++  +   I  L  LK  D+S N + +IPDEIG+  AL +   SSN ++ +PSS+
Sbjct: 1243 NLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSI 1302

Query: 134  GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             R  NLS+   SNN I+ +P+ +   +K+ +L++  N++  LS                 
Sbjct: 1303 ARLTNLSELNISNNIISCIPDGIYALTKLQRLNLMRNQIKDLS----------------- 1345

Query: 194  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM-GNNALSALPAELGKL 252
                   E++G +  L+ LD+  N +  IP SI     L    + GN  L++LP  + +L
Sbjct: 1346 -------ESVGKMVELVVLDISHNDLSIIPLSIKNLQMLEILDLQGNAKLTSLPIGIIRL 1398

Query: 253  SKLGTLDLHSNQLKEYCVEAC 273
            + L    L    ++   +  C
Sbjct: 1399 TNLNQCGLEGTTMETPPMNVC 1419



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 160/357 (44%), Gaps = 35/357 (9%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +N +PE I   +R+  +DLH N +  +P   +   +L +  +  N   ++P  +  L +L
Sbjct: 21  INALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPTPIIHLQQL 80

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            +L ++ N L E   E   +  L+ L L  N +  + P I K+  L K  +  N +  + 
Sbjct: 81  TSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKFNIKDNMVTEIP 140

Query: 315 SSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
           + +        LK+L    + +N+ ++   + + L+ +A        +  +   ++S IP
Sbjct: 141 AEI------GKLKHLEEIDISKNQVTQIPKSVDGLVHLA--------KFDISQNHVSVIP 186

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI    ++   ++S N ++++PP +     L    ++ N++   P  I  S+  L  L 
Sbjct: 187 GEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDI-KSMIELKELS 245

Query: 434 LDNNPLRQVPSDGFKD--IPMLQI-----LDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
           L  N L+ +P   ++   + + Q      ++L  +I  L E           ++ L    
Sbjct: 246 LTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSE-----------DIKLGSRS 294

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L   P+ I +   ++ L++S NSL S+P     L  L EL+LSDN+   +P  +  +
Sbjct: 295 LTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKI 351



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 3/182 (1%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S+ + L G N++A+P +I     +  +DL  N++ ELP + +   +LQ L LS N  +  
Sbjct: 11  SEVIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSM 70

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I+  L  L+ L ++ N L ++P++ +    + ++      I  +  +P  S L +L 
Sbjct: 71  PTPII-HLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEI--SPGISKLKNLI 127

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +  ++   + E P +I +L+ L  +D+S+N +  IP+    L  L + D+S N++S +P 
Sbjct: 128 KFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPG 187

Query: 539 EL 540
           E+
Sbjct: 188 EI 189


>gi|428174569|gb|EKX43464.1| hypothetical protein GUITHDRAFT_87793 [Guillardia theta CCMP2712]
          Length = 622

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 162/542 (29%), Positives = 257/542 (47%), Gaps = 82/542 (15%)

Query: 38  GDKWWEAVDL----------QKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           G   WE++ L          ++L+   L++N++ +    LR+L LL  L +  N+L ++P
Sbjct: 21  GSLHWESLKLSSLPQQIRLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIP 80

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIG-----------------------SATALVKFDC 121
            AIGE   +KSL +  N +++I  EIG                       S TAL   + 
Sbjct: 81  PAIGEFQSMKSLFLHNNCLVQIAPEIGQLGNLKVLLLQGNRLHEVPLELCSCTALTTLNL 140

Query: 122 S-SNQLKELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             +N+L+ LP  +GR   L+  F A  N + SLP   +    ++ L +  N ++ + ++ 
Sbjct: 141 QDNNKLQSLPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSD- 199

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
             ++  L  L  + N L  +   IG +  L R++L +N+I+SIP       +L+E  +  
Sbjct: 200 FGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSG 259

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ---LRLSVLDLSNNSLSGLPPEI-G 295
           N +S++P ELG+L+ L  L +  N L       C    LR  V+  SNN L+ LPP +  
Sbjct: 260 NPISSIPQELGQLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFD 319

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            M +LRKLL   N +  L  ++ +  T  L           +D++ S+  + L  +    
Sbjct: 320 GMKSLRKLLANNNRISRLPDNVSSLTTLQLFNL--------DDNQISSLPDSLCLLYDL- 370

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               + LSL    L++IP +      +   +LS N +Q LP  LSS  SLQTL +  NKI
Sbjct: 371 ----QTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKI 426

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           K  PD   + L+SL  L LDNN              ++++L           +P  S L 
Sbjct: 427 KSLPDNC-SRLTSLRSLNLDNN--------------VIELL-----------SPEISQLK 460

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQ L +R  +LR  P +I +L+QLR LDL +N L  +P     LTS+  L L  N++ +
Sbjct: 461 VLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLES 520

Query: 536 LP 537
           LP
Sbjct: 521 LP 522



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 235/477 (49%), Gaps = 24/477 (5%)

Query: 40  KWWEAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           K      L +L +A  N+ + L      +  LT L+++ N +S++P+  G    L  LD+
Sbjct: 152 KVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHHLDL 211

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +  EIG   +L + + + N++  +P   G   NLS+   S N I+S+P++L  
Sbjct: 212 AGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQ 271

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA--SKNLLNGMPETI-GSLSRLIRLDLH 215
            + +  L V+ N LT L  +L    T L +L+   S N L  +P ++   +  L +L  +
Sbjct: 272 LTALECLHVDRNPLTSLPRSL-CHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLAN 330

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            NRI  +P ++S   +L  F + +N +S+LP  L  L  L TL L  N+L     +   L
Sbjct: 331 NNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLL 390

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L   +LS+N L GLP  +  + +L+ L +  N +++L  +       + L  LRS   
Sbjct: 391 TGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNC------SRLTSLRSLNL 444

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +N   E  + +       ++L V  + L +    L  +P EI +  ++  LDL  N + +
Sbjct: 445 DNNVIELLSPE------ISQLKVL-QTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQ 497

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP  + +  S+ +L+L +N ++  P++I   L++L  L L++N L+ +P   F  +  L 
Sbjct: 498 LPAVVGTLTSVVSLLLDKNSLESLPNSI-GDLTNLEKLCLEDNQLQLLPPT-FPSLSSLT 555

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            LDLS N I  LP     + +  LQE Y +R ++   P+ I     L  L+L+ N +
Sbjct: 556 YLDLSLNKIKFLPNQ--INRMKSLQEAYFQRNEISILPSSISLCTGLHTLNLANNQV 610



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 7/193 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           RLS     + L   +L   PS +     +  L+L  N + ++PP +    S+++L L  N
Sbjct: 38  RLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQSMKSLFLHNN 97

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPF 471
            +      I   L +L  L L  N L +VP +       L  L+L  N  + SLP     
Sbjct: 98  CLVQIAPEI-GQLGNLKVLLLQGNRLHEVPLE-LCSCTALTTLNLQDNNKLQSLPMK--V 153

Query: 472 SSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
             L  L  L++    L ++ P     ++ L  L L+ N++  IP  F N  +L  LDL+ 
Sbjct: 154 GRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHHLDLAG 213

Query: 531 NNISALPPELVSV 543
           N + AL PE+  V
Sbjct: 214 NQLEALAPEIGHV 226


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 189/371 (50%), Gaps = 16/371 (4%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +M +P EIG    L K + + N+L  LP  +G+
Sbjct: 64  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGK 123

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +    NN +T+LPE++     + +L++  N+LT L    I     L EL    N 
Sbjct: 124 LQNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKG-IEKLQKLQELHLYSNR 182

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG L  L +L+L  N++ ++P  I     L + Y+ +N L+ LP E+ KL  L
Sbjct: 183 LANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNL 242

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E  +L+ L  L L  N L+ LP EIGK+  L+ L L G+ L TL 
Sbjct: 243 RDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLP 302

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L+ LR    EN  ++ +T  + +  +        +EL L    L+ +P 
Sbjct: 303 KGIEK------LQNLRDLYLEN--NQLTTLPKGIEKLQ-----NLQELYLSSNKLTTLPE 349

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +  ++ +LDLS+N +  LP E+     L+ L L  N++K  P+ I  +L SL  L L
Sbjct: 350 EIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEI-GNLQSLESLNL 408

Query: 435 DNNPLRQVPSD 445
             N L   P +
Sbjct: 409 RGNSLTSFPEE 419



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 15/308 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL+   L ++P E+ K               +LQ+L L +N +  L E++  L  L  
Sbjct: 106 KLNLTRNRLANLPEEIGK-------------LQNLQELHLENNQLTTLPEEIGKLQNLQE 152

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  I +L  L+ L +  N +  +P+EIG    L K +   NQL  LP  
Sbjct: 153 LNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKG 212

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      +N +T+LPE++     +  L +EGN+LT LS   I     L +L   
Sbjct: 213 IEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKE-IGKLQNLRDLYLG 271

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L +L  L L  +++ ++P  I    +L + Y+ NN L+ LP  + KL
Sbjct: 272 GNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKL 331

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L SN+L     E  +L +L  LDLS N L+ LP EIGK+  LR L L  N L+
Sbjct: 332 QNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLK 391

Query: 312 TLRSSLVN 319
           TL   + N
Sbjct: 392 TLPEEIGN 399



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 185/396 (46%), Gaps = 41/396 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  LN++ N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 80  NLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTT 139

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L + +   NQL  LP  + +   L +    +N + +LPE++     + KL
Sbjct: 140 LPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKL 199

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L +L    N L  +PE I  L  L  L L  N++ ++   
Sbjct: 200 NLGVNQLTALPKG-IEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKE 258

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLS 283
           I    +L + Y+G N L+ LP E+GKL KL TL L  +QL      +E  Q  L  L L 
Sbjct: 259 IGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQ-NLRDLYLE 317

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP  I K+  L++L L+ N L T                    LPE        
Sbjct: 318 NNQLTTLPKGIEKLQNLQELYLSSNKLTT--------------------LPEE------- 350

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I    +L    + L L    L+ +P EI +  ++  L L  N ++ LP E+ +  
Sbjct: 351 -----IEKLQKL----QRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQ 401

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           SL++L L  N +  +P+ I   L  L  L L  NP 
Sbjct: 402 SLESLNLRGNSLTSFPEEI-GKLQKLQQLYLGGNPF 436



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 194/401 (48%), Gaps = 45/401 (11%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           K SN+ + +LP+++     +  LD+  N+L  L                        P+ 
Sbjct: 62  KNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTL------------------------PKE 97

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L +L +L+L +NR+ ++P  I    +L E ++ NN L+ LP E+GKL  L  L+L  
Sbjct: 98  IGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEEIGKLQNLQELNLGF 157

Query: 263 NQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           NQL      +E  Q +L  L L +N L+ LP EIGK+  L+KL L  N L  L   +   
Sbjct: 158 NQLTALPKGIEKLQ-KLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGI--- 213

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               L K  +  L  N  +      E L  +        ++L LEG  L+ +  EI +  
Sbjct: 214 --EKLQKLQQLYLYSNRLTNLPEEIEKLQNL--------RDLYLEGNQLTTLSKEIGKLQ 263

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  L L  N +  LP E+     LQTL L  +++   P  I   L +L  L L+NN L 
Sbjct: 264 NLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGI-EKLQNLRDLYLENNQLT 322

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P  G + +  LQ L LS N + +LPE      L  LQ L L + +L   P +I +LQ+
Sbjct: 323 TLPK-GIEKLQNLQELYLSSNKLTTLPEE--IEKLQKLQRLDLSKNKLTTLPKEIGKLQK 379

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LR L L  N L+++PE   NL SL  L+L  N++++ P E+
Sbjct: 380 LRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEI 420


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 221/464 (47%), Gaps = 39/464 (8%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G  + S +   D+    Y N D+A +         +Q+L L+   ++K+ +++  L  L 
Sbjct: 6   GRFSASAQKKMDINRLFYSNLDQALQNKS-----KVQRLNLSSQKLKKIPQNIVLLKNLE 60

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+ +N+L+  P  + +L  LK L +  N+I  +P  I S  +L   D   N L +LP 
Sbjct: 61  ELNLGNNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPG 120

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------- 175
            + R  NL+    +NN +  LPE++    KM   +  GN+L  L                
Sbjct: 121 KIVRLRNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLG 180

Query: 176 SNNL----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            N L    +  +  L  L  S+N L  +P+ +GSL +L  L L QN +  +P  I     
Sbjct: 181 KNQLESVSLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQ 240

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   Y+  N +  LP EL  L +L  + L  NQL E   +  +L +L VL L +N L  L
Sbjct: 241 LRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRAL 300

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----------SRLPENEDS 339
           P  IG +T L  L L+ N L  L SSL N  +   + ++R           S+L + E  
Sbjct: 301 PESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSI-WVRKNNLQTLPKSISQLKKIERI 359

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            AS  +  L+ +        K L++ G  L+ IPSE+W   E+  LD SRN I  LP ++
Sbjct: 360 YASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKI 419

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           S   SL+ L+LS N+++  P  I T L +L  L LDNN L ++P
Sbjct: 420 SDLRSLRILVLSHNRLRTLPFGI-TRLKNLRELYLDNNQLAKLP 462



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 211/478 (44%), Gaps = 73/478 (15%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE--GDKW--------WEAVDLQKL 50
           +D+ L+       LNLS++ L+ +P  +    +      G+          ++   L+ L
Sbjct: 26  LDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLKIL 85

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L +NNI+ L + + +L  L VL++  N L +LP  I  L  L  L+++ N + ++P+ I
Sbjct: 86  RLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENI 145

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G    +  F+   NQLK+LP+S      L       N + S+   L     +  LD+  N
Sbjct: 146 GKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESV--SLGKYKNLQSLDISRN 203

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +LT + +NL  S   LT L   +N L  +PE IG+LS+L RL L++N+I  +P  ++   
Sbjct: 204 RLTKIPDNL-GSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLV 262

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSG 289
            L    + +N L  LP ++GKLS+L  L LH N L+        L L   L LSNN L  
Sbjct: 263 QLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLEL 322

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +G M +L+ + +  N L+TL  S+             S+L + E   AS  +  L+
Sbjct: 323 LPSSLGNMASLKSIWVRKNNLQTLPKSI-------------SQLKKIERIYASQNQISLL 369

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI----------------- 392
            +        K L++ G  L+ IPSE+W   E+  LD SRN I                 
Sbjct: 370 PVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILV 429

Query: 393 -----------------------------QELPPELSSCASLQTLILSRNKIKDWPDA 421
                                         +LPP + +  +L+   + RN   +   A
Sbjct: 430 LSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRNGFTNEQKA 487



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 222/464 (47%), Gaps = 26/464 (5%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           S L  A+     ++ L++S   + KIP  I     L + +  +NQL   P  L +   L 
Sbjct: 24  SNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLK 83

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
             +  NN I  LP+ +     +  LD++ N L  L    I     LT+L  + N +  +P
Sbjct: 84  ILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGK-IVRLRNLTQLNIANNKVKELP 142

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E IG L ++   + + N++  +P+S S    L    +G N L +    LGK   L +LD+
Sbjct: 143 ENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLES--VSLGKYKNLQSLDI 200

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+L +       L+ L+ L L  N+L+ LP +IG ++ LR+L L  N ++ L   L  
Sbjct: 201 SRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELT- 259

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
               +L++    +L  N+  E        I   ++L V    LSL    L A+P  I   
Sbjct: 260 ----SLVQLQVVKLEHNQLLELPND----IGKLSQLKV----LSLHHNLLRALPESIGNL 307

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  L LS N ++ LP  L + ASL+++ + +N ++  P +I + L  +  +    N +
Sbjct: 308 TLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSI-SQLKKIERIYASQNQI 366

Query: 440 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL---RRMQLREAPTDILR 496
             +P +   ++  L+ L +S N+  L E P  S L  L+ELY     R Q+   P  I  
Sbjct: 367 SLLPVE-LAELTQLKSLAISGNL--LTEIP--SELWGLEELYYLDASRNQITSLPNKISD 421

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LRIL LS N L+++P G   L +L EL L +N ++ LPP +
Sbjct: 422 LRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNM 465



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 5/184 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K L L   N+  +P  I     +  LD+ RNS+ +LP ++    +L  L ++ NK+K+ P
Sbjct: 83  KILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELP 142

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           + I   L  +   +   N L+Q+P+  F  +  L+ L L  N     E+       +LQ 
Sbjct: 143 ENI-GKLKKMRVFEAYGNQLKQLPAS-FSSLRKLESLGLGKNQL---ESVSLGKYKNLQS 197

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L + R +L + P ++  L++L  L L QN+L  +PE    L+ L  L L++N I  LP E
Sbjct: 198 LDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKE 257

Query: 540 LVSV 543
           L S+
Sbjct: 258 LTSL 261



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 37/58 (63%)

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           QL   P  + +L++L+IL L  N+++ +P+G  +L SL  LD+  N++  LP ++V +
Sbjct: 68  QLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRL 125


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 229/494 (46%), Gaps = 68/494 (13%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S  +L  LP  +G+L  L+ LD+S N +  +P E+G  T +   + S  QL+ LP  
Sbjct: 5   LDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPE 64

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELI 190
           +GR   L     S+N + +LP ++   + +  LD+   +L  L    +  W  T L  L 
Sbjct: 65  VGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLP---LEVWKLTQLEWLD 121

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N L  +P  +G L+ +  LDL Q ++ ++PS +     L    + +N L  LPAE+G
Sbjct: 122 LSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVG 181

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L+ L  LDL SN L+    E      +  LDLS+  L  LP E+ K+T L  L L  NP
Sbjct: 182 HLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNP 241

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L+TL         P  + +L +                            K L+L    L
Sbjct: 242 LQTL---------PTEVGHLTN---------------------------VKYLNLSDCQL 265

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P E+    ++ KLDL  N +Q LP E+  C +++ L LS  +++  P  +   L+ L
Sbjct: 266 HILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVW-KLTQL 324

Query: 430 SCLKLDNNPLRQVPSD---------------GFKDIP-------MLQILDLSYN-IASLP 466
             L L +NPL+ +P++                   +P        L+ LDLS N + +LP
Sbjct: 325 EWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLP 384

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  L +++ L L +  L   P ++ RL QL  LDL  N L ++P     LT++  L
Sbjct: 385 AE--VGQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHL 442

Query: 527 DLSDNNISALPPEL 540
           DLS   +  LPPE+
Sbjct: 443 DLSHCQLHTLPPEV 456



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 195/396 (49%), Gaps = 34/396 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P EV             W+   L+ L L+ N ++ L  ++  L  +  L
Sbjct: 97  LDLSHCQLHTLPLEV-------------WKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 143

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S  +L  LP+ +G L  L+ LD+S N +  +P E+G  T L K D  SN L+ LP+ +
Sbjct: 144 DLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEV 203

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G C N+     S+  + +LP ++   +++  LD+  N L  L    +   T +  L  S 
Sbjct: 204 GHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTE-VGHLTNVKYLNLSD 262

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P  +G L++L +LDL  N + ++P+ +  C ++    + +  L  LP E+ KL+
Sbjct: 263 CQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLT 322

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L SN L+    E  QL  +  L+LS+  L  LPPE+GK+T L +L L+ NPL+T
Sbjct: 323 QLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQT 382

Query: 313 LRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L +    L N     L + L   LP              +   T+L    + L L    L
Sbjct: 383 LPAEVGQLTNVKHLDLSQCLLHTLPPE------------VGRLTQL----EWLDLRSNPL 426

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            A+P+E+ +   +  LDLS   +  LPPE+     L
Sbjct: 427 HALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 217/455 (47%), Gaps = 54/455 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  LR +P EV +                L+ L L+ N ++ L  ++  L  +  L
Sbjct: 51  LNLSHCQLRTLPPEVGR-------------LTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SH +L  LP  + +L  L+ LD+S N +  +P E+G  T +   D S  QL+ LPS +
Sbjct: 98  DLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEV 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   L     S+N + +LP ++   + + KLD+  N L  L    +   T +  L  S 
Sbjct: 158 GRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAE-VGHCTNVKHLDLSH 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L  +P  +  L++L  LDL  N + ++P+ +    ++    + +  L  LP E+G+L+
Sbjct: 217 CQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLT 276

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  LDL SN L+    E      +  LDLS+  L  LP E+ K+T L  L L+ NPL+T
Sbjct: 277 QLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQT 336

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         PA +  L +                            K+L+L    L  +
Sbjct: 337 L---------PAEVGQLTN---------------------------VKQLNLSDCQLHTL 360

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P E+ +  ++ +LDLS N +Q LP E+    +++ L LS+  +   P  +   L+ L  L
Sbjct: 361 PPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEV-GRLTQLEWL 419

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLP 466
            L +NPL  +P++    +  ++ LDLS+  + +LP
Sbjct: 420 DLRSNPLHALPAE-VGQLTNVKHLDLSHCQLHTLP 453


>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
          Length = 799

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 249/522 (47%), Gaps = 40/522 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++QK+ LA N +  + E++  L  LT L++SHN + E+PA IG +  L  L++S N I  
Sbjct: 202 NIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKT 261

Query: 106 IPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +P+EI +   AL   D S N++  LP  +     L+ F  SNN +  LPE + +   ++ 
Sbjct: 262 LPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTT 321

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V  NKL  +S         L  L  S+N +  +PE I  +  L+ LDL  N+I  +PS
Sbjct: 322 LGVSQNKL--MSMKFAVYLKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPS 379

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           SI    SL    +  N LSA+P  LG    L  LDL  N+L     +  +LR L    +S
Sbjct: 380 SIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVS 439

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-EAS 342
           +N ++ +P  I  +  LR L ++ N L  L         P  L +L   + +N  S   +
Sbjct: 440 HNEIALMPKSIDFLYQLRSLDVSKNGLNELN-------LPKTLTHL--NMSDNPLSINPT 490

Query: 343 TTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +  ++ M  +  + +   L+L  + +  IP  ++    +  LDLS N+++ L   +  
Sbjct: 491 DIRSTIVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCK 550

Query: 402 CASLQTLILSRNKIKDWPDAI---------------LTSLS-------SLSCLKLDNNPL 439
              L ++    N+I   P+ I               LTS S       SL  L + NN +
Sbjct: 551 MRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKI 610

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
             +P D F D+  L  +DLS N + + P++     L  L  L + +  + + P +   L 
Sbjct: 611 TLLP-DNFGDLNKLINMDLSENELLNFPKD-QIDVLASLLHLNISKNHIDQMPIEFPYLY 668

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L++L  + N L+SIP     + SL  LD+SDN I +LP ++
Sbjct: 669 RLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKI 710



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 229/487 (47%), Gaps = 64/487 (13%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           +++N +E L E +R LP LT L VS NKL  +  A+  L  L+ L +S NSI  IP+EI 
Sbjct: 301 VSNNEVEYLPESIRELPCLTTLGVSQNKLMSMKFAV-YLKQLEHLYLSRNSIEVIPEEID 359

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
              +LV  D S N++KELPSS+G   +L       N ++++P+ L     ++ LD+  N+
Sbjct: 360 HMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNR 419

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI--LSIPSSISGC 229
           LTVL ++L      L     S N +  MP++I  L +L  LD+ +N +  L++P      
Sbjct: 420 LTVLPSDL-RKLRNLETFHVSHNEIALMPKSIDFLYQLRSLDVSKNGLNELNLPK----- 473

Query: 230 CSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
            +L    M +N LS  P ++   +  +G  D   N             L+ L L N  + 
Sbjct: 474 -TLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRN-------------LTSLALCNLGMD 519

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            +PP +  +  L+ L L+ N L+TL                                +++
Sbjct: 520 EIPPSVFNLRCLKHLDLSNNALKTL-------------------------------TDNV 548

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             M   +S+T+         ++A+P +I    ++ KL +S N +    P L    SL  L
Sbjct: 549 CKMRGLVSITACH-----NEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDL 603

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            +S NKI   PD     L+ L  + L  N L   P D    +  L  L++S N I  +P 
Sbjct: 604 NMSNNKITLLPDN-FGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPI 662

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
             P+  L  L+ L      L+  P+D+ +++ L +LD+S N ++S+PE    +  L E++
Sbjct: 663 EFPY--LYRLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEIN 720

Query: 528 LSDNNIS 534
           +S+N I+
Sbjct: 721 VSENKIT 727



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 256/559 (45%), Gaps = 63/559 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           L   N + + +P E+Y N           E   L     A NN +++L + +  L  L  
Sbjct: 44  LKFGNGNWKSLPVEIYDN----------EEISQLAIKFTAENNRLKRLPKSIAALENLEH 93

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +++++N LS  P ++  +  L+ L +  N+I K+P  I   T L K   S+N+++ LP S
Sbjct: 94  IDITNNTLSAFPGSVSRMKKLEVLIIKNNAIKKLPPAIHKCTGLQKLYASNNKIRALPKS 153

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  ++S    S+N I S+ + L + +  +++D+  N++T +    +     + ++  +
Sbjct: 154 IGKA-SISYMDVSSNMIRSIKKGLYEMT--AEVDLSDNRITEMPTAAVKKPN-IQKINLA 209

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N +  +PE I  LSRL  LDL  N +  IP+ I G   L    + +N +  LP E+  L
Sbjct: 210 RNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNL 269

Query: 253 S-KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              L  LD+  N++         LR L+  D+SNN +  LP  I ++  L  L ++ N L
Sbjct: 270 GYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTTLGVSQNKL 329

Query: 311 RTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATRLSVTS------- 359
            +++ ++       L  YL       +PE  D   S    DL     +   +S       
Sbjct: 330 MSMKFAVYLKQLEHL--YLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSL 387

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K L++ G  LSAIP  +     +T LDLS N +  LP +L    +L+T  +S N+I   P
Sbjct: 388 KSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMP 447

Query: 420 DAI-----LTSL-------------SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            +I     L SL              +L+ L + +NPL   P+D    I ++   D   N
Sbjct: 448 KSIDFLYQLRSLDVSKNGLNELNLPKTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRN 507

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           + S               L L  + + E P  +  L+ L+ LDLS N+L+++ +    + 
Sbjct: 508 LTS---------------LALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMR 552

Query: 522 SLTELDLSDNNISALPPEL 540
            L  +    N I+ALP ++
Sbjct: 553 GLVSITACHNEITALPEKI 571



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 217/470 (46%), Gaps = 63/470 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N+IE + E++ ++  L  L++S NK+ ELP++IG +  LKSL+V  N +  I
Sbjct: 341 LEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSAI 400

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G    L   D S N+L  LPS L +  NL  F  S+N I  +P+ +    ++  LD
Sbjct: 401 PDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMPKSIDFLYQLRSLD 460

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N L  L  NL  +   LT L  S N L+  P  I S   ++    H   + S+    
Sbjct: 461 VSKNGLNEL--NLPKT---LTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRNLTSL---- 511

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
              C+L         +  +P  +  L  L  LDL +N LK      C++R L  +   +N
Sbjct: 512 -ALCNL--------GMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHN 562

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            ++ LP +I  +  L KL ++ N L +   SL              RL            
Sbjct: 563 EITALPEKISALKKLEKLHVSNNGLTSFSPSL-------------GRL------------ 597

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP-ELSSCAS 404
                      V+  +L++    ++ +P    +  ++  +DLS N +   P  ++   AS
Sbjct: 598 -----------VSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLAS 646

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L +S+N I   P      L  L  L+  +N L+ +PSD  K +  L++LD+S N I 
Sbjct: 647 LLHLNISKNHIDQMPIE-FPYLYRLKVLRAASNDLKSIPSDMDK-MKSLEVLDISDNIIE 704

Query: 464 SLPENPPFSSLPHLQELYLRRMQL-REAPTDILRL-QQLRILDLSQNSLQ 511
           SLPE      +P L+E+ +   ++ R  P     L Q++++ +  Q+S +
Sbjct: 705 SLPEK--ICKMPELKEINVSENKITRGWPKAWENLRQKIKVENADQDSFK 752



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 165/346 (47%), Gaps = 26/346 (7%)

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E I  L+  I+     NR+  +P SI+   +L    + NN LSA P  + ++ KL  L +
Sbjct: 62  EEISQLA--IKFTAENNRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLII 119

Query: 261 HSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            +N +K+    +  C   L  L  SNN +  LP  IGK  ++  + ++ N +R+++  L 
Sbjct: 120 KNNAIKKLPPAIHKCT-GLQKLYASNNKIRALPKSIGK-ASISYMDVSSNMIRSIKKGLY 177

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                         L +N  +E  T          + ++    L+  G+ L  IP  I +
Sbjct: 178 EMTAEV-------DLSDNRITEMPTA------AVKKPNIQKINLARNGVTL--IPENIDK 222

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +T LDLS N++QE+P ++     L  L LS N IK  P+ I     +L  L + +N 
Sbjct: 223 LSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDISHNE 282

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           +  +P DG K +  L   D+S N +  LPE+     LP L  L + + +L      +  L
Sbjct: 283 IPVLP-DGMKSLRKLTYFDVSNNEVEYLPES--IRELPCLTTLGVSQNKLMSMKFAVY-L 338

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +QL  L LS+NS++ IPE   ++ SL  LDLS N I  LP  + +V
Sbjct: 339 KQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNV 384



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 3/257 (1%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           +T   LN+S+  L   P ++       G+ D      +L  L L +  ++++   + NL 
Sbjct: 473 KTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLR---NLTSLALCNLGMDEIPPSVFNLR 529

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S+N L  L   + ++  L S+    N I  +P++I +   L K   S+N L  
Sbjct: 530 CLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTS 589

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
              SLGR ++L D   SNN IT LP++  D +K+  +D+  N+L     + I     L  
Sbjct: 590 FSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLASLLH 649

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  SKN ++ MP     L RL  L    N + SIPS +    SL    + +N + +LP +
Sbjct: 650 LNISKNHIDQMPIEFPYLYRLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEK 709

Query: 249 LGKLSKLGTLDLHSNQL 265
           + K+ +L  +++  N++
Sbjct: 710 ICKMPELKEINVSENKI 726


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 237/484 (48%), Gaps = 28/484 (5%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G+  K   A+DL+      N    L +++  L  L  LN+  N+L+ LP  + +L  
Sbjct: 111 EEIGQLQKL-RALDLRA-----NQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQK 164

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+  N +  +P EIG   +L      +NQ   LP  + +  NL      +N +T+L
Sbjct: 165 LQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTAL 224

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+ KLD+  N+LT L    I     L  L    N L  +PE IG L  L +L
Sbjct: 225 PKEMRQLQKLQKLDLRENQLTTLPKE-IGQLKSLQTLYLLANQLTILPEEIGKLRNLQKL 283

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +NR  ++P  I    +L   Y+  N L+A P E+ +L  L  L+L  N+L     E 
Sbjct: 284 YLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEI 343

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L +L+LS N L+ LP E+GK+  L+ L L    + T    ++       L + R+
Sbjct: 344 GQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRT 403

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           +L         TT    I     L    KEL+LE   L+A+P EI     + +L+L+ NS
Sbjct: 404 QL---------TTLPGEIGQMQNL----KELNLEKNQLTALPKEIGRLQNLEELNLNSNS 450

Query: 392 IQ--ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
            Q   LP E+   ++L+ L L  N + + P  I   LS L  L L  N L  +P +    
Sbjct: 451 NQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEI-GQLSRLETLTLFRNSLETLPEE-IGQ 508

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDLSYN ++S+P+      L +L+ L+LR+  L   P +I  LQ L  L L+ +
Sbjct: 509 LWNLRELDLSYNPLSSIPKE--IGQLKNLRILHLRKTPLARLPDEIGELQDLEELILNPD 566

Query: 509 SLQS 512
           + + 
Sbjct: 567 TFEK 570



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 237/508 (46%), Gaps = 69/508 (13%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KLS LP  IGEL  L++LD+  N +  +P EI     L       NQL  L  
Sbjct: 52  VLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSE 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+   L       N   +LP+++     +  L+++ N+LT L   +      L +L  
Sbjct: 112 EIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEM-RQLQKLQKLDL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L  L L  N+  ++P  I    +L    + +N L+ALP E+ +
Sbjct: 171 RENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  LDL  NQL     E  QL+ L  L L  N L+ LP EIGK+  L+KL L  N  
Sbjct: 231 LQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRF 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEG 366
            TL   +        L+ L+S                L     +L+   KE+    +L+ 
Sbjct: 291 TTLPKDI------GQLQNLQS----------------LYLYGNQLTAFPKEIEQLQNLQI 328

Query: 367 MNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           +NLS      +P EI +   +  L+LS N + +LP EL    +L+TL L   +I  +P  
Sbjct: 329 LNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKE 388

Query: 422 ILT----------------------SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           IL                        + +L  L L+ N L  +P    K+I  LQ L+  
Sbjct: 389 ILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALP----KEIGRLQNLE-E 443

Query: 460 YNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
            N+ S   +  FSSLP       +L+ L+L    L   P +I +L +L  L L +NSL++
Sbjct: 444 LNLNS--NSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLET 501

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPEL 540
           +PE    L +L ELDLS N +S++P E+
Sbjct: 502 LPEEIGQLWNLRELDLSYNPLSSIPKEI 529



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 176/353 (49%), Gaps = 25/353 (7%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P+ IG L  L  LDL  N++  +P  I    +L    +  N L+ L  E+G+L KL
Sbjct: 60  LSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LDL +NQ      E  QL+ L  L+L +N L+ LP E+ ++  L+KL L  N L TL 
Sbjct: 120 RALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLP 179

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +    +   L YLR+       ++ +T  ++++ +        + L+L+   L+A+P 
Sbjct: 180 KEIGQLKSLQTL-YLRA-------NQFATLPKEILQLQN-----LQALNLDSNELTALPK 226

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E+ +  ++ KLDL  N +  LP E+    SLQTL L  N++   P+ I   L +L  L L
Sbjct: 227 EMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEI-GKLRNLQKLYL 285

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREA 490
             N    +P    KDI  LQ L   Y     + + P+      L +LQ L L   +L   
Sbjct: 286 CENRFTTLP----KDIGQLQNLQSLYLYGNQLTAFPKE--IEQLQNLQILNLSYNRLTTL 339

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P +I +LQ L+IL+LS N L  +P+    L +L  LDL    I+  P E++ +
Sbjct: 340 PEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQL 392



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 5/160 (3%)

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L+LS   +  LP E+    +LQTL L  NK+   P  IL  L +L  L L  N L  + S
Sbjct: 53  LNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEIL-QLQNLQMLGLCCNQLT-ILS 110

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +    +  L+ LDL  N  A+LP+      L +LQ L L   +L   P ++ +LQ+L+ L
Sbjct: 111 EEIGQLQKLRALDLRANQFATLPKE--ILQLQNLQTLNLDSNELTALPKEMRQLQKLQKL 168

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DL +N L ++P+    L SL  L L  N  + LP E++ +
Sbjct: 169 DLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQL 208


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 222/465 (47%), Gaps = 45/465 (9%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I  +  LKSL +S N I  IP EIG  TAL +   + NQL  LPS +G   NL   
Sbjct: 6   FPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTL 65

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE--LIASKNLLNGMP 200
              NN    +P ++   + ++ L + GNK + L  +     T L +  L  S N L  +P
Sbjct: 66  WVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLP-SFFCDMTSLKDLHLWLSFNQLKKLP 124

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L+ LIRL++  N+I S+P  I    +L E +  +NA++ +P  +G L +L  + L
Sbjct: 125 QAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRL 184

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N L     E CQL  L  L +SNN +  LP     +T+L +L L+GNP+         
Sbjct: 185 SNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPI--------- 235

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                      + LP N            I + T L    K L LE   L  +P+ I + 
Sbjct: 236 -----------TALPVN------------IGIFTEL----KNLDLESNQLKTLPAAIGQL 268

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            ++  L L  N++ +LP  +    +L+ L L  N+++  P  + T L++L  + L+NN L
Sbjct: 269 TKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWT-LNNLKTISLENNQL 327

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           R++P +    +  L  L ++YN + SLP N     LP L  L L   QL      I  L 
Sbjct: 328 RRIPPE-IAGMAYLSRLQVAYNQLTSLPTN--IGLLPALSRLNLEGNQLSLLSPAIGMLT 384

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L  L +  N +Q +P    NL +L +L + +N +  LPPEL  +
Sbjct: 385 LLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKL 429



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 238/520 (45%), Gaps = 68/520 (13%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD--VSFNS 102
            +LQ L + +N    +  +++ L  LT L++S NK S LP+   ++  LK L   +SFN 
Sbjct: 60  TNLQTLWVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQ 119

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-----------------------CLNL 139
           + K+P  IG    L++ +  +NQ+  LP  +G+                        + L
Sbjct: 120 LKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVEL 179

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
            + + SNN +++LP ++    ++ +L +  N++  L NN     T LTEL  S N +  +
Sbjct: 180 REVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNF-HLLTSLTELSLSGNPITAL 238

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  IG  + L  LDL  N++ ++P++I     L   ++ +N L  LP  + KL  L  L 
Sbjct: 239 PVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELC 298

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           LH NQL+        L  L  + L NN L  +PPEI  M  L +L +  N L +L +++ 
Sbjct: 299 LHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNI- 357

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
            G  PAL                                    L+LEG  LS +   I  
Sbjct: 358 -GLLPAL----------------------------------SRLNLEGNQLSLLSPAIGM 382

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  L +  N IQ LPPE+ +  +L+ L +  N++K  P  +   L+ L  L + NN 
Sbjct: 383 LTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELF-KLTKLRRLAISNNS 441

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  + S     +  LQ L  + N I  LP  P    L +L ELYL    L   P ++  +
Sbjct: 442 LNSI-SGEISLLTGLQSLVTTGNRIRILP--PSLGLLTNLTELYLHDNSLTHFPEEVGTM 498

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L+ + L+ N L+ I  GF  +TSLT + L+DN I  +P
Sbjct: 499 YSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVP 538



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 199/429 (46%), Gaps = 52/429 (12%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LSN SL ++PNEV     + GE         L++L +++N I  L  +   L  LT L++
Sbjct: 184 LSNNSLSNLPNEVC----QLGE---------LKQLRISNNQIRALPNNFHLLTSLTELSL 230

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S N ++ LP  IG    LK+LD+  N +  +P  IG  T L      SN L +LP+S+ +
Sbjct: 231 SGNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRK 290

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +    +N + SLP  L   + +  + +E N+L  +    IA    L+ L  + N 
Sbjct: 291 LKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPE-IAGMAYLSRLQVAYNQ 349

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L RL+L  N++  +  +I     L    +  N +  LP E+G L  L
Sbjct: 350 LTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNL 409

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L + +NQ+K    E  +L +L  L +SNNSL+ +  EI  +T L+ L+ TGN +R L 
Sbjct: 410 EDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILP 469

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
            SL                              L+T  T       EL L   +L+  P 
Sbjct: 470 PSL-----------------------------GLLTNLT-------ELYLHDNSLTHFPE 493

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E+     +  + L+ N ++E+        SL ++ L+ NKI+  P   +  +S LS L L
Sbjct: 494 EVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVP-TWMWKVSKLSSLNL 552

Query: 435 DNNPLRQVP 443
           D NPL   P
Sbjct: 553 DGNPLSSPP 561



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 233/519 (44%), Gaps = 94/519 (18%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++KL + +  L  L  LNV +N++S LP  IG+L  L+ L  + N+I +IP  
Sbjct: 113 LWLSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPV 172

Query: 110 IG-----------------------SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG                           L +   S+NQ++ LP++     +L++   S 
Sbjct: 173 IGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSG 232

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N IT+LP ++   +++  LD+E N+L  L                        P  IG L
Sbjct: 233 NPITALPVNIGIFTELKNLDLESNQLKTL------------------------PAAIGQL 268

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           ++L  L L  N +  +P+SI    +L E  + +N L +LP+ L  L+ L T+ L +NQL+
Sbjct: 269 TKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLR 328

Query: 267 EYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E A    LS L ++ N L+ LP  IG +  L +L L GN L  L       P   +
Sbjct: 329 RIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLL------SPAIGM 382

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK---ELSLEGMNLSAIPSEIWEAGEI 382
           L  L          EA     ++I +        +   +LS+    +  +P E+++  ++
Sbjct: 383 LTLL----------EALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKL 432

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            +L +S NS+  +  E+S    LQ+L+ + N+I+  P + L  L++L+ L L +N L   
Sbjct: 433 RRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPS-LGLLTNLTELYLHDNSLTHF 491

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           P +                           ++  L+ + L   +L+E     +R+  L  
Sbjct: 492 PEE-------------------------VGTMYSLKTITLNNNKLKEISAGFMRVTSLTS 526

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           + L+ N +Q +P     ++ L+ L+L  N +S+ PPE +
Sbjct: 527 MQLADNKIQIVPTWMWKVSKLSSLNLDGNPLSS-PPERI 564



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 35/309 (11%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDK--------WWEAVDLQKLILAHNNIEKLKE 62
           +L+L + +L D+PN +   KN +E    D          W   +L+ + L +N + ++  
Sbjct: 273 TLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPP 332

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  +  L+ L V++N+L+ LP  IG L  L  L++  N +  +   IG  T L      
Sbjct: 333 EIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVD 392

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N ++ LP  +G   NL D    NN + +LP +L   +K+ +L +  N L  +S   I+ 
Sbjct: 393 FNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNSISGE-ISL 451

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T L  L+ + N                       RI  +P S+    +L E Y+ +N+L
Sbjct: 452 LTGLQSLVTTGN-----------------------RIRILPPSLGLLTNLTELYLHDNSL 488

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G +  L T+ L++N+LKE      ++  L+ + L++N +  +P  + K++ L 
Sbjct: 489 THFPEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSKLS 548

Query: 302 KLLLTGNPL 310
            L L GNPL
Sbjct: 549 SLNLDGNPL 557


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 216/436 (49%), Gaps = 56/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++L +  LR++P  VY+                L  L L  N I  +++D++NL LLT+L
Sbjct: 174 VDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITAVEKDIKNLSLLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T + K D   N+L +LP S+
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++++P  LA CSK+ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YLR                DL     RL +T+ +       
Sbjct: 459 KLESL---------PNEIAYLR----------------DL----QRLILTNNQ------- 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS +P  I     +T L L  N + +LP E+ +  +L+ L L+ N   +     L   S 
Sbjct: 483 LSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSK 542

Query: 429 LSCLKLDNNPLRQVPS 444
           LS + ++N PL  +P+
Sbjct: 543 LSIMSIENCPLNTLPA 558



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 226/496 (45%), Gaps = 64/496 (12%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L LA  +I  L   ++ L  LT L +  NKL  LP  +G L  L +L +S NS+  +PD
Sbjct: 104 RLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L+E+P  + R  +L+      N IT++ +D+ + S ++ L + 
Sbjct: 164 SLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIR 223

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I     L  L  + N L  +P+ IG+ +++ +LDL  N +L +P SI  
Sbjct: 224 ENKIKQLPAE-IGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGN 282

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             SL    +  N LSA+P  L + SKL  L+L                       NN +S
Sbjct: 283 LSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLE----------------------NNIIS 320

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP                     L SSLVN  +  L +      P    S+ ST     
Sbjct: 321 ALP-------------------EGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTI---- 357

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQT 407
                        L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  
Sbjct: 358 -----------YALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE 406

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L+ N++   P+ + + L SL  L L NN LR +P  G  ++  L+ LDL  N + SLP
Sbjct: 407 LNLATNQLNKIPEDV-SGLVSLEVLILSNNLLRSLP-HGIGNLRKLRELDLEENKLESLP 464

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                + L  LQ L L   QL   P  I  L  L  L L +N L  +PE    L +L EL
Sbjct: 465 NE--IAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEEL 522

Query: 527 DLSDN-NISALPPELV 541
            L+DN ++++LP EL 
Sbjct: 523 YLNDNPHLNSLPFELA 538



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLNKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L  LP  IG L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G  +NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L  L   ++A 
Sbjct: 541 SKLSIMSIENCPLNTLPAQIVAG 563



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 50/278 (17%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPAL 325
           C E   +RL   DL+  S+  LP  + ++T L +L L GN L++L      LVN      
Sbjct: 97  CREENSVRL---DLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVN------ 147

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
                                 L+T+A           L   +L+++P  +    ++  +
Sbjct: 148 ----------------------LVTLA-----------LSENSLTSLPDSLDNLKQLRMV 174

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           DL  N ++E+PP +    SL TL L  N+I      I  +LS L+ L +  N ++Q+P++
Sbjct: 175 DLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDI-KNLSLLTMLSIRENKIKQLPAE 233

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              ++  L  LD+++N +  LP+     +   + +L L+  +L + P  I  L  L+ L 
Sbjct: 234 -IGELCNLITLDVAHNQLEHLPKE--IGNCTQITKLDLQHNELLDLPDSIGNLSSLKSLG 290

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           L  N L +IP      + L EL+L +N ISALP  L+S
Sbjct: 291 LRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLS 328


>gi|198429521|ref|XP_002125267.1| PREDICTED: similar to Suppressor Of Clr family member (soc-2)
           [Ciona intestinalis]
          Length = 733

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 241/513 (46%), Gaps = 62/513 (12%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           N+ ++ +++ ++  L  L  ++NKL E+P+ + +L  L+++ +  N++  +P+ +     
Sbjct: 25  NLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPESLCDLKY 84

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   +CS NQ+K LP  +G   NL    A+ NC+T LP  ++   ++  L + GN++T L
Sbjct: 85  LEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRITHL 144

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
              +      +  L  S N LN +P  I  + +L++L L  N+I S+PS+I    SL + 
Sbjct: 145 PIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPSTIRRLESLIDL 204

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-------------------- 275
            + +N L  LP++L  L  L  L L  N L+       +L                    
Sbjct: 205 RLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQI 264

Query: 276 ----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
               +L +L L +N L+ LPPE+GK+ TLR+L +  N     R        P  L  LR+
Sbjct: 265 GDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARC------IPESLSRLRN 318

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                  L+V    L + G  +  +P E+  A  + ++ LS+N 
Sbjct: 319 -----------------------LTV----LDVAGNQVKDLPLELKTASSLNEVKLSKNV 351

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP  L S   +  L +S NK+K  P  I  +LSSL  + L  N  +Q P++    + 
Sbjct: 352 LNHLPVALCSLVDVILLDVSDNKLKCIPRDI-RNLSSLRKIILSRNNFKQFPTE-LCHVT 409

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ ++ S N I+++P    F  L  L E+ +   + ++ P ++  +  LR LD+S N L
Sbjct: 410 QLEEINFSNNLISTIPREISF--LKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQL 467

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             IP  FK   +L  L+LSDN     P  +  V
Sbjct: 468 TDIPYEFKFFENLERLNLSDNQFDEFPIRVCFV 500



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 262/595 (44%), Gaps = 83/595 (13%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
            G + L  R+L +VP EV+             +  +LQ L+  +N ++++  D+R L  L
Sbjct: 16  GGRVTLDIRNLNEVPKEVF-------------DITELQCLVANNNKLKEIPSDVRKLSCL 62

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
             +++  N L+ LP ++ +L  L+ L+ S N I  +P  IG+   L++   + N L ELP
Sbjct: 63  QAISLRGNALTSLPESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELP 122

Query: 131 SS-----------------------LGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLD 166
                                    +G+ L  +     SNNC+ +LP  +    K+ KL 
Sbjct: 123 VGISYLWQLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLG 182

Query: 167 VEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETIG 204
           + GNK++ L + +                      + +   L EL  S+N L  +   + 
Sbjct: 183 LSGNKISSLPSTIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVS 242

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  L ++ N+I  +P  I  C  L    + +N L+ LP ELGKL  L  L +  N+
Sbjct: 243 RLPSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNR 302

Query: 265 LK-EYCV--EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
                C+     +LR L+VLD++ N +  LP E+   ++L ++ L+ N L  L  +L + 
Sbjct: 303 FSGARCIPESLSRLRNLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSL 362

Query: 321 PTPALLKYLRSRL---PENEDSEASTTK-----EDLITMATRLSVTSK--ELSLEGMNLS 370
               LL    ++L   P +  + +S  K      +     T L   ++  E++     +S
Sbjct: 363 VDVILLDVSDNKLKCIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLIS 422

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            IP EI     +T++D+S N  Q+ P EL     L+ L +S N++ D P        +L 
Sbjct: 423 TIPREISFLKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYE-FKFFENLE 481

Query: 431 CLKLDNN-----PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
            L L +N     P+R       K++   Q       +  +PE+     L HL+ + L   
Sbjct: 482 RLNLSDNQFDEFPIRVCFVTTLKELHFDQ--KCGRKLELVPEH--ICELEHLENISLDHN 537

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           Q++  P  I   + LR L +  N L+ +PE    L +L  LDL  N ++ LP ++
Sbjct: 538 QIQNLPESISNCRSLRKLSVVGNVLEKLPESICELPNLKSLDLKGNQLTELPTQI 592



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 7/259 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           VD+  L ++ N ++ +  D+RNL  L  + +S N   + P  +  +  L+ ++ S N I 
Sbjct: 363 VDVILLDVSDNKLKCIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLIS 422

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP EI     L + D S N+ ++ P  L   + L     S N +T +P +      + +
Sbjct: 423 TIPREISFLKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYEFKFFENLER 482

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL---LNGMPETIGSLSRLIRLDLHQNRILS 221
           L++  N+        +   T L EL   +     L  +PE I  L  L  + L  N+I +
Sbjct: 483 LNLSDNQFDEFPIR-VCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQIQN 541

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 279
           +P SIS C SL +  +  N L  LP  + +L  L +LDL  NQL E   +  +L  +LS 
Sbjct: 542 LPESISNCRSLRKLSVVGNVLEKLPESICELPNLKSLDLKGNQLTELPTQIHRLEKQLSH 601

Query: 280 LDLSNNSLSGLPPEIGKMT 298
           + L  N L   P ++  MT
Sbjct: 602 ISLGENPLKD-PLKVVAMT 619


>gi|428175990|gb|EKX44877.1| hypothetical protein GUITHDRAFT_87300 [Guillardia theta CCMP2712]
          Length = 618

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 240/545 (44%), Gaps = 63/545 (11%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M  IL +  +   LNLS   L D P  + K                L++LIL HN I  L
Sbjct: 79  MPNILTSLTSLTVLNLSRNQLSDCPVHLCK-------------LTLLEELILDHNKISVL 125

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              + N   L   ++SHN L  LPA+I +   L + D+S N +  +P E+G    L    
Sbjct: 126 PNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALL 185

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              N L  +   LG C+NLS      N +T LP +L     ++++D++ N++  + N  I
Sbjct: 186 LPDNMLTTIVKELGGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNT-I 244

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L   +   N L+ +PE+IG L  L  LDL  N I  +P SI     L E  +  N
Sbjct: 245 GRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLTELNLSAN 304

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
           ++SALP E+  L++L T    SN L       C+L  L+ LDL  N L+ LP    ++  
Sbjct: 305 SISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSLDLQENKLNSLPSNFSEL-- 362

Query: 300 LRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
                    PL ++   R++    P P        R+   E  + +  +   +       
Sbjct: 363 ---------PLMSINLSRNNFEIFPPPL------ERMTNLEHIDLTDNRLTRLPFMIGRF 407

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGE--ITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           V +  + L G  +S +P  +   GE  +  ++LS+N + +LP  L +   L+ + LS N 
Sbjct: 408 VYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSALFNIKRLERICLSGNN 467

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           +++ P+  L  L  L  L LD+N L  +PS                             L
Sbjct: 468 LRELPNQ-LCVLKKLKELWLDHNQLTYLPSR-------------------------LGEL 501

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L  LYL   +L+  P +++ L+ L++L LS N L+ +P  F  L+ L EL L DN   
Sbjct: 502 VSLSALYLHSNRLKMIPKNLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFE 561

Query: 535 ALPPE 539
           AL  E
Sbjct: 562 ALQLE 566



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 216/494 (43%), Gaps = 67/494 (13%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           ++ +HN +S + + IG     ++L  + N +  I  E+ + T LV+ D   N  + +P+ 
Sbjct: 23  VSFAHNHISTISSEIGLFENAQTLCFNDNKLESIACELRNLTRLVRLDLEGNLFETMPNI 82

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L    +L+    S N ++  P  L   + + +L ++ NK++VL N  I +   L     S
Sbjct: 83  LTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKISVLPNK-IGNCGALRHFSIS 141

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P +I    RL+  DL  N +  +P+ +     L    + +N L+ +  ELG  
Sbjct: 142 HNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALLLPDNMLTTIVKELGGC 201

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  +DL  NQ+     E  +LR L+ +DL +N +  +P  IG++ +L   L+  N L 
Sbjct: 202 VNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNALD 261

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++  S+        LK L                              +EL L   N+  
Sbjct: 262 SIPESI------GQLKSL------------------------------QELDLSDNNIQL 285

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I    ++T+L+LS NSI  LP E+     L T   S N +   P +I+  L++L+ 
Sbjct: 286 LPLSIGSISDLTELNLSANSISALPREIVVLTRLVTFRYSSNNLLTLP-SIVCKLTTLTS 344

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L  N L  +PS+ F ++P++ I     N    P  PP   + +L+ + L   +L   P
Sbjct: 345 LDLQENKLNSLPSN-FSELPLMSINLSRNNFEIFP--PPLERMTNLEHIDLTDNRLTRLP 401

Query: 492 TDILRL-------------------------QQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
             I R                            L++++LS+N L  +P    N+  L  +
Sbjct: 402 FMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSALFNIKRLERI 461

Query: 527 DLSDNNISALPPEL 540
            LS NN+  LP +L
Sbjct: 462 CLSGNNLRELPNQL 475



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 39/326 (11%)

Query: 219 ILSIPSSISGCCSL-AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
           ++++PS I+G CS   +    +N +S + +E+G      TL  + N+L+     AC+LR 
Sbjct: 6   LIAVPSEIAGFCSQPYKVSFAHNHISTISSEIGLFENAQTLCFNDNKLESI---ACELR- 61

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
                              +T L +L L GN   T+ + L +  +  +L   R++L    
Sbjct: 62  ------------------NLTRLVRLDLEGNLFETMPNILTSLTSLTVLNLSRNQL---S 100

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D      K  L+          +EL L+   +S +P++I   G +    +S N+++ LP 
Sbjct: 101 DCPVHLCKLTLL----------EELILDHNKISVLPNKIGNCGALRHFSISHNALRSLPA 150

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
            +     L    LS N +   P A +  L  L  L L +N L  +  +    + +  I  
Sbjct: 151 SIKDFKRLLNFDLSHNHLTILP-AEVGMLPLLDALLLPDNMLTTIVKELGGCVNLSHIDL 209

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           +   +  LP       L  L  + L   Q+ + P  I RLQ L I  +  N+L SIPE  
Sbjct: 210 IGNQVTYLP--AELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNALDSIPESI 267

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L SL ELDLSDNNI  LP  + S+
Sbjct: 268 GQLKSLQELDLSDNNIQLLPLSIGSI 293



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS   L D+P+ ++                 L+++ L+ NN+ +L   L  L  L  L
Sbjct: 438 INLSKNGLFDLPSALFN-------------IKRLERICLSGNNLRELPNQLCVLKKLKEL 484

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L+ LP+ +GEL  L +L +  N +  IP  +     L     S N+L+ELP   
Sbjct: 485 WLDHNQLTYLPSRLGELVSLSALYLHSNRLKMIPKNLVELKGLKVLTLSGNELRELPWDF 544

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            R   L +    +N   +L  + +   ++  L    N LT
Sbjct: 545 HRLSELEELWLDDNQFEALQLERSLFPRLQFLTFRHNPLT 584


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 233/506 (46%), Gaps = 44/506 (8%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +       +DLQ     H  +  L +++ NL  L  L++   +L+ LP  I
Sbjct: 37  VYYNLTEALQHPTDVRTLDLQAQDSNHK-LTNLPKEIGNLQNLQKLSLYGKQLTTLPKEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ LD+++NS+  +P EIG    L      +NQL   P  + +   L     ++N
Sbjct: 96  GKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +T+LPE++    K+ +L ++GN+ T L    I     L EL    N    +P+ I  L 
Sbjct: 156 QLTTLPEEIGKLQKLKELHLDGNQFTTLPKE-IEKLQKLKELHLGSNRFTTLPKEIKKLQ 214

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L+L  NR  ++P  I    +L    + +N  + LP E+ KL  L  L+L SN+   
Sbjct: 215 NLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTT 274

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E   L +L  L L++N L+ LP EIGK+ +L++L L  N L TL         P  +
Sbjct: 275 LPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTL---------PKEI 325

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L++    N ++   TT    I     L    ++L L G   + +P EI     + KLD
Sbjct: 326 GNLQNLQKLNLNNNPLTTLPKEIGKLQNL----QQLFLGGNQFTTLPKEIGNLQNLQKLD 381

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N +  LP E+ +  +LQ L L  N++   P  I  +L SL                 
Sbjct: 382 LYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEI-GNLQSLES--------------- 425

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                    LDLSYN + +LP+           ELY    QL+  P +I +LQ+L  L L
Sbjct: 426 ---------LDLSYNDLTTLPKEIGKLQKLKKLELYYN--QLKTLPKEIEKLQKLETLGL 474

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN 531
             N L ++PE    L  L ELDL DN
Sbjct: 475 YGNQLTTLPEEIGKLQKLQELDLGDN 500



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 210/468 (44%), Gaps = 45/468 (9%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++KL+ LP  IG L  L+ L +    +  +P EIG    L   D + N L  LP  +G+
Sbjct: 61  SNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGK 120

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L D +  NN +T+ P+++    K+ KL +  N+LT L    I     L EL    N 
Sbjct: 121 LQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEE-IGKLQKLKELHLDGNQ 179

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
              +P+ I  L +L  L L  NR  ++P  I    +L    + +N  + LP E+ KL  L
Sbjct: 180 FTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNL 239

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L SN+      E  +L+ L  L+L +N  + LP EIG +  L+KL L  N L TL 
Sbjct: 240 QWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLP 299

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP- 373
             +  G   +L    R  L EN+          L T+   +        L   N      
Sbjct: 300 KEI--GKLQSLQ---RLTLWENQ----------LTTLPKEIGNLQNLQKLNLNNNPLTTL 344

Query: 374 -SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
             EI +   + +L L  N    LP E+ +  +LQ L L  NK+   P  I  +L +L  L
Sbjct: 345 PKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKEI-GNLQNLQKL 403

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L NN L  +P +   ++  L+ LDLSYN                         L   P 
Sbjct: 404 DLYNNQLTTLPKE-IGNLQSLESLDLSYN------------------------DLTTLPK 438

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I +LQ+L+ L+L  N L+++P+  + L  L  L L  N ++ LP E+
Sbjct: 439 EIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEI 486



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 191/408 (46%), Gaps = 21/408 (5%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+L   + SN+ +T+LP+++ +   + KL + G +LT L    I     L  L  + N
Sbjct: 52  RTLDLQA-QDSNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKE-IGKLQKLEWLDLNYN 109

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L +L  L L  N++ + P  I     L +  + +N L+ LP E+GKL K
Sbjct: 110 SLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQK 169

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  NQ      E  +L +L  L L +N  + LP EI K+  L+ L L  N   TL
Sbjct: 170 LKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTL 229

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +K L++    N DS   TT    I     L      L+L+    + +P
Sbjct: 230 ---------PKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQW----LNLDSNRFTTLP 276

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI    ++ KL L+ N +  LP E+    SLQ L L  N++   P  I    +      
Sbjct: 277 KEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNL 336

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            +N         G   +  LQ L L  N   +LP+     +L +LQ+L L   +L   P 
Sbjct: 337 NNNPLTTLPKEIG--KLQNLQQLFLGGNQFTTLPKE--IGNLQNLQKLDLYYNKLTTLPK 392

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I  LQ L+ LDL  N L ++P+   NL SL  LDLS N+++ LP E+
Sbjct: 393 EIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEI 440



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 15/297 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +     +P E+ K               +LQ L L  N    L ++++ L  L  L
Sbjct: 219 LNLDSNRFTTLPKEIKK-------------LQNLQWLNLDSNRFTTLPKEIKKLQNLQWL 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  IG L  L+ L ++ N +  +P EIG   +L +     NQL  LP  +
Sbjct: 266 NLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL     +NN +T+LP+++     + +L + GN+ T L    I +   L +L    
Sbjct: 326 GNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKE-IGNLQNLQKLDLYY 384

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L +LDL+ N++ ++P  I    SL    +  N L+ LP E+GKL 
Sbjct: 385 NKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEIGKLQ 444

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L+L+ NQLK    E  +L +L  L L  N L+ LP EIGK+  L++L L  NP
Sbjct: 445 KLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQELDLGDNP 501


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 207/391 (52%), Gaps = 20/391 (5%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L +  +  L +++  L  L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G
Sbjct: 55  LRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +LD+  NK
Sbjct: 115 QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNK 174

Query: 172 LTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P  I    
Sbjct: 175 LTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ 
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 292

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +T  +++
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEV 343

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           + + + L V    L+L    LS +P EI +   +  L L  N +  LP E+    +LQ L
Sbjct: 344 LRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQEL 398

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            L  N++  +P  I   L +L  L L  NPL
Sbjct: 399 CLDENQLTTFPKEI-RQLKNLQELHLYLNPL 428



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 195/398 (48%), Gaps = 38/398 (9%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T+LP+++     + +LD+  N LT L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTTLPKEIGQLQNLQRLDLSFNSLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +L  L  LDL+SN+L   
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L TL   +  G    L  
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL-- 234

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWE 378
                             E L+    R++   KE         L L    L+ +P EI +
Sbjct: 235 ------------------EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQ 276

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + +LDL +N +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN 
Sbjct: 277 LQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQ 335

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P +  + +  LQ+L L  N +++LP+      L +LQ L L   QL   P +I +L
Sbjct: 336 LTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVLGLISNQLTTLPKEIGQL 392

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           Q L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 393 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 137/269 (50%), Gaps = 25/269 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L+++ NKL+ LP  IG+L  LK+L++    +  
Sbjct: 141 NLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTT 200

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 201 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 260

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L                        P+ IG L  L RLDLHQN++ ++P  
Sbjct: 261 DLHQNQLTTL------------------------PKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLGLISNQLTTL 385



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 168/347 (48%), Gaps = 42/347 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L RLDL  N + ++P  I    +L E  +  N+L+ LP E+G+L  L
Sbjct: 60  LTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LDLH N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL 
Sbjct: 120 QRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTL- 178

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  +  L++                            K L+L    L+ +P 
Sbjct: 179 --------PKEIGQLQN---------------------------LKTLNLIVTQLTTLPK 203

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI E   +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L
Sbjct: 204 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDL 262

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N L  +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +
Sbjct: 263 HQNQLTTLPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKE 319

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I +LQ LR+LDL  N L ++P+    L SL  L L  N +S LP E+
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 213/444 (47%), Gaps = 68/444 (15%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  +PA +G L  L+ L++  N +  +P EIG  T+L +     NQL+ +P+ +G+  +L
Sbjct: 17  IGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSL 76

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELIASKNLLN 197
           ++    +N +TS+P ++   + + +LD+E N LT +   L   W  T L  LI   N L 
Sbjct: 77  TELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAEL---WQLTSLERLILDNNQLT 133

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P  IG L+ L  L LH  ++ S+P+ I    SL E ++  N L++LPAE+G+L+ L  
Sbjct: 134 SLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEK 193

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L+ NQL     E  QL  L  LDL +N L+ LP EIG++T+L +L L+GN L ++   
Sbjct: 194 LYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSV--- 250

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 PA +  L S                             EL L G  L+++P+EI
Sbjct: 251 ------PAEIGQLASL---------------------------TELELNGNQLTSLPAEI 277

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
            +   + +L+L+ N +  LP E+    SL+ L L  N +   P  I   L+SL+ L+L  
Sbjct: 278 GQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEI-GQLTSLTELELHG 336

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  VP++                            L  L+ L  +  QL   P +I +
Sbjct: 337 NQLTSVPAE-------------------------IGLLTSLRGLGFKDNQLTSLPAEIGQ 371

Query: 497 LQQLRILDLSQNSLQSIPEGFKNL 520
           L  LR L L  N L S+P   + L
Sbjct: 372 LTSLRGLGLECNLLTSVPAAIREL 395



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 192/377 (50%), Gaps = 15/377 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  +  ++  L  LT L++  N+L  +PA IG+L  L  L++  N +  +
Sbjct: 30  LRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLTSV 89

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LV+ D   N L  +P+ L +  +L      NN +TSLP ++   + + +L 
Sbjct: 90  PAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELG 149

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +   +LT L    I   T L E+    N L  +P  IG L+ L +L L+ N++ S+P+ +
Sbjct: 150 LHHIQLTSLPAE-IGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAEL 208

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  + +N L+ LPAE+G+L+ L  L L  NQL     E  QL  L+ L+L+ N
Sbjct: 209 WQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGN 268

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++T+L++L L GN L +L         PA +  L S    +      T+ 
Sbjct: 269 QLTSLPAEIGQLTSLKELELNGNQLTSL---------PAEIGQLTSLRLLSLRDNLLTSV 319

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T L+    EL L G  L+++P+EI     +  L    N +  LP E+    SL
Sbjct: 320 PAEIGQLTSLT----ELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSL 375

Query: 406 QTLILSRNKIKDWPDAI 422
           + L L  N +   P AI
Sbjct: 376 RGLGLECNLLTSVPAAI 392



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 204/439 (46%), Gaps = 64/439 (14%)

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           F  I  +P E+G  +AL K +   NQL  +P+ +G+  +L++     N + S+P ++   
Sbjct: 14  FGLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQL 73

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + +++L++  N+LT                         +P  IG L+ L++LDL  N +
Sbjct: 74  TSLTELNLFDNQLT------------------------SVPAEIGQLTSLVQLDLEYNHL 109

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P+ +    SL    + NN L++LPAE+G+L+ L  L LH  QL     E  QL  L 
Sbjct: 110 TSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLR 169

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            + L  N L+ LP EIG++T+L KL L GN L ++         PA L  L S       
Sbjct: 170 EVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSV---------PAELWQLTSL------ 214

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                +EL L+   L+ +P+EI +   + +L LS N +  +P E
Sbjct: 215 ---------------------EELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAE 253

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +   ASL  L L+ N++   P  I   L+SL  L+L+ N L  +P++  +   +  +   
Sbjct: 254 IGQLASLTELELNGNQLTSLPAEI-GQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLR 312

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
              + S+P       L  L EL L   QL   P +I  L  LR L    N L S+P    
Sbjct: 313 DNLLTSVPAE--IGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIG 370

Query: 519 NLTSLTELDLSDNNISALP 537
            LTSL  L L  N ++++P
Sbjct: 371 QLTSLRGLGLECNLLTSVP 389



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 157/283 (55%), Gaps = 9/283 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L++LIL +N +  L  ++  L  L  L + H +L+ LPA IG+L  L+ + +  N
Sbjct: 117 WQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGN 176

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG  T+L K     NQL  +P+ L +  +L +    +N +T+LP ++   + 
Sbjct: 177 QLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTS 236

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L + GN+LT +    I     LTEL  + N L  +P  IG L+ L  L+L+ N++ S
Sbjct: 237 LWQLHLSGNQLTSVPAE-IGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTS 295

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL    + +N L+++PAE+G+L+ L  L+LH NQL     E   L  L  L
Sbjct: 296 LPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGL 355

Query: 281 DLSNNSLSGLPPEIGKMTTLRKL-----LLTGNP--LRTLRSS 316
              +N L+ LP EIG++T+LR L     LLT  P  +R LR++
Sbjct: 356 GFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIRELRAA 398



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 23/351 (6%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L+  +P  +G LS L +L+L  N++ S+P+ I    SL E  +G N L ++PAE+G+L+
Sbjct: 15  GLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLT 74

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L  NQL     E  QL  L  LDL  N L+ +P E+ ++T+L +L+L  N L +
Sbjct: 75  SLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTS 134

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-VTS-KELSLEGMNLS 370
           L         PA +  L S        E       L ++   +  +TS +E+ L G  L+
Sbjct: 135 L---------PAEIGQLTSL------KELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLT 179

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           ++P+EI +   + KL L  N +  +P EL    SL+ L L  N++ + P  I   L+SL 
Sbjct: 180 SLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEI-GQLTSLW 238

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L  N L  VP++    +  L  L+L+ N + SLP       L  L+EL L   QL  
Sbjct: 239 QLHLSGNQLTSVPAE-IGQLASLTELELNGNQLTSLP--AEIGQLTSLKELELNGNQLTS 295

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L  LR+L L  N L S+P     LTSLTEL+L  N ++++P E+
Sbjct: 296 LPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEI 346



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 1/210 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  +  +L  L  L  L++  N+L+ LPA IG+L  L  L +S N +  +
Sbjct: 191 LEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSV 250

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG   +L + + + NQL  LP+ +G+  +L + + + N +TSLP ++   + +  L 
Sbjct: 251 PAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLS 310

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N LT +    I   T LTEL    N L  +P  IG L+ L  L    N++ S+P+ I
Sbjct: 311 LRDNLLTSVPAE-IGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEI 369

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLG 256
               SL    +  N L+++PA + +L   G
Sbjct: 370 GQLTSLRGLGLECNLLTSVPAAIRELRAAG 399


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 258/552 (46%), Gaps = 83/552 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N+++ L   + NL  L  L +++N++S LP  IG+L  L++  +S NS++ 
Sbjct: 99  NLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVS 158

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD IG    L  F    N+L  LP S+G+  NL+    S N +TS+P+ + D +K+  L
Sbjct: 159 IPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDL 218

Query: 166 DVEGNKLTVL---------------------SNNL------IASWTMLTELIASKNLLNG 198
            +  N L+ L                      NN+      I     L +L  S N L  
Sbjct: 219 RLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTR 278

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P +I  L++L  L LH N++ S+PS I     +    +  N++  LP  +G L +L  L
Sbjct: 279 LPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRL 338

Query: 259 DLHSNQLKEYCVEACQLR---------------------------LSVLDLSNNSLSGLP 291
             H NQ+        +LR                           +  L L  NSLS LP
Sbjct: 339 YAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLP 398

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-----EASTTKE 346
            +IG +  L+KL ++GN  ++L SS+        L +L +RL  +++      E+    +
Sbjct: 399 EDIGSLHGLKKLSVSGNLFKSLPSSI------GHLTWL-TRLYAHDNQITLLPESIGGLQ 451

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           DL TM            ++  +L +IP  I    ++  L + +N++  LP  +    +L 
Sbjct: 452 DLKTMW-----------VQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLT 500

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
           TL  S NK+   PD++   L  L  L+LD N L  +P++  K I  L+ L ++ N + +L
Sbjct: 501 TLWASNNKLTSIPDSV-CELHELQHLQLDTNSLTFLPTNIGK-ISWLKTLCVNNNSLTTL 558

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P+     +L  L++L++   QL + P  I +L+ L  L +S+N+L S+P     L  L +
Sbjct: 559 PDR--IGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMP-NMSYLHKLEQ 615

Query: 526 LDLSDNNISALP 537
               +N + +LP
Sbjct: 616 FRFENNELQSLP 627



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 30/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           + ++D+  N I K+P  I +   L     +SN+L  LP S+ +  NLS      N + +L
Sbjct: 54  VHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTL 113

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  + +  ++ +L +  N+++ L    I     L   + SKN L  +P++IG L++L   
Sbjct: 114 PNSICNLQQLERLYLNNNQISHLP-ECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDF 172

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE- 271
             H+N++ S+P SI    +L + ++  N+L+++P  +  L+KL  L LH+N L  Y  + 
Sbjct: 173 QAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNL-SYLPDR 231

Query: 272 -----ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                 C L +L  L L  N++  LP  IG++  LRKL ++ N L  L  S+ +      
Sbjct: 232 IVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICD------ 285

Query: 326 LKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                  L + ED +    K   L +   +L    K LS+ G ++  +P  I +  ++T+
Sbjct: 286 -------LNKLEDLQLHMNKLSSLPSQIGKLKHV-KNLSISGNSIKILPDSIGDLQQLTR 337

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP--DAILTSLSSLSCLKLDNNPLRQV 442
           L    N I  LP  +    +L T+ +SRN +      +  + + S +  L+L  N L  +
Sbjct: 338 LYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYL 397

Query: 443 PSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P D    +  L+ L +S N+  SLP +     L  L  LY    Q+   P  I  LQ L+
Sbjct: 398 PED-IGSLHGLKKLSVSGNLFKSLPSS--IGHLTWLTRLYAHDNQITLLPESIGGLQDLK 454

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            + + +NSL SIP    +L  L +L +  NN+S+LP
Sbjct: 455 TMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLP 490



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 32/283 (11%)

Query: 21   LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
            L++ P ++ +NF            VDLQ      N +  L ED+     L  LN+++NKL
Sbjct: 834  LKEFPEKLLENFQRV-------RKVDLQS-----NYLTTLPEDINYSQKLYYLNINNNKL 881

Query: 81   SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
              LP ++ EL  LK L    N +  +PD  G  + L   + S+N++K LP S+G+  NL+
Sbjct: 882  KCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLT 941

Query: 141  DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               A+NN I+ LP    D  K+ KL      L + +NN     +  +E I++      +P
Sbjct: 942  QLCANNNSISELP----DIRKLKKLTA----LYLGNNNKTRPNSKFSECISN------LP 987

Query: 201  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             T+ +L       +  N + S+P SIS   +L E  +  N L +LP E+GKL  L  L +
Sbjct: 988  ITLKTLW------MFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWV 1041

Query: 261  HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            H+N LK     +   +L  L L++N L  LP  IG + +LR +
Sbjct: 1042 HNNLLKSLPDISSLKQLQDLSLTDNKLEKLPEGIGNLKSLRSI 1084



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 171/411 (41%), Gaps = 43/411 (10%)

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            G  L+     L+ ++T +  +   KN +  +P +I +L +L  L ++ NR+ S+P SI 
Sbjct: 36  RGCGLSTFPGILLTTYTCVHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSIC 95

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
              +L+   +  N+L  LP  +  L +L  L L++NQ+        +LR L    +S NS
Sbjct: 96  KLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNS 155

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK- 345
           L  +P  IG +  L+      N L +L  S+        L   R+ L    DS     K 
Sbjct: 156 LVSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKL 215

Query: 346 EDLITMATRLSVTS--------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           +DL      LS                  +L L G N+  +P  I +   + KL +S NS
Sbjct: 216 QDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNS 275

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP  +     L+ L L  NK+   P  I   L  +  L +  N ++ +P D   D+ 
Sbjct: 276 LTRLPHSICDLNKLEDLQLHMNKLSSLPSQI-GKLKHVKNLSISGNSIKILP-DSIGDLQ 333

Query: 452 MLQILDLSYN-IASLPE------------------------NPPFSSLPHLQELYLRRMQ 486
            L  L    N I+ LPE                        N    +   +Q+L L +  
Sbjct: 334 QLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNS 393

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L   P DI  L  L+ L +S N  +S+P    +LT LT L   DN I+ LP
Sbjct: 394 LSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLP 444



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 129/551 (23%), Positives = 231/551 (41%), Gaps = 95/551 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL+ + +  N++  +  ++ +L  L  L +  N LS LP ++G+L  L +L  S N +  
Sbjct: 452 DLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTS 511

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD +     L      +N L  LP+++G+   L     +NN +T+LP+ + +   + KL
Sbjct: 512 IPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKL 571

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  N+L+ L                        PE+I  L  L  L + +N ++S+P +
Sbjct: 572 HVANNQLSQL------------------------PESIRKLKNLTTLVVSKNALVSMP-N 606

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +S    L +F   NN L +LP  +  L  L T+    + +K+   +  QL   + +   N
Sbjct: 607 MSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIKFDVD-IKDNKGKVQQLLSKLYNEETN 665

Query: 286 SLSGLPPEIGKMTTLRKL--------------LLTGNPLR---------TLRSSLVNGPT 322
           S +  P E   M+T  KL               + GN  +         T   ++ +   
Sbjct: 666 S-NPRPTESTTMSTPTKLKHSEEVPMGAGIQRYVMGNKPKGQAIIFNNHTFNGNMADRDG 724

Query: 323 PALLKYLRSRLPENEDSEAS----TTKEDLITM-----------ATRLSVTSKELSLEGM 367
             + +    ++ EN D         T  D+ T            A  +   +K+ SL+ M
Sbjct: 725 TGIDERNLEKMFENLDITVHVYNDVTANDMETYIRACQGSESMKAVVVHPDAKKASLDVM 784

Query: 368 --------NLSAIPSEI-WE-----AGEITKLDLSRNS-----------IQELPPE-LSS 401
                     S++P  + W      +  ITK+D   N            ++E P + L +
Sbjct: 785 PNEADFIIGYSSVPGYVSWRDTRRGSWYITKMDSHWNENEKEYIAVKSDLKEFPEKLLEN 844

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
              ++ + L  N +   P+ I  S   L  L ++NN L+ +P    +   + Q+L  +  
Sbjct: 845 FQRVRKVDLQSNYLTTLPEDINYS-QKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNE 903

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           + +LP+N  F  L  L+ L +   +++  P  I +L+ L  L  + NS+  +P+  + L 
Sbjct: 904 LDTLPDN--FGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELPD-IRKLK 960

Query: 522 SLTELDLSDNN 532
            LT L L +NN
Sbjct: 961 KLTALYLGNNN 971



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 188  ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            E IA K+ L   PE +  +  R+ ++DL  N + ++P  I+    L    + NN L  LP
Sbjct: 826  EYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLP 885

Query: 247  AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
              L +L+ L  L   +N+L        +L +L  L++SNN +  LP  IGK+  L +L  
Sbjct: 886  ESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCA 945

Query: 306  TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
              N +  L       P    LK L +    N +     +K       + L +T K L + 
Sbjct: 946  NNNSISEL-------PDIRKLKKLTALYLGNNNKTRPNSK--FSECISNLPITLKTLWMF 996

Query: 366  GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
            G +L+++P  I     + +L +  N ++ LP E+    SL  L +  N +K  PD  ++S
Sbjct: 997  GNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD--ISS 1054

Query: 426  LSSLSCLKLDNNPLRQVP 443
            L  L  L L +N L ++P
Sbjct: 1055 LKQLQDLSLTDNKLEKLP 1072



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 5/181 (2%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           + L+   ++ +P  I    ++  L ++ N +  LP  +    +L TL L RN +K  P++
Sbjct: 57  VDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNS 116

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I  +L  L  L L+NN +  +P +    +  L+   +S N + S+P++     L  LQ+ 
Sbjct: 117 I-CNLQQLERLYLNNNQISHLP-ECIGKLRNLETFLISKNSLVSIPDS--IGDLNKLQDF 172

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              R +L   P  I +LQ L  L +S+NSL SIP+   +L  L +L L  NN+S LP  +
Sbjct: 173 QAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRI 232

Query: 541 V 541
           V
Sbjct: 233 V 233



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 132/553 (23%), Positives = 228/553 (41%), Gaps = 110/553 (19%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+KL +A+N + +L E +R L  LT L VS N L  +P  +  LH L+      N +  +
Sbjct: 568  LEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPN-MSYLHKLEQFRFENNELQSL 626

Query: 107  PDEIGSATAL--VKFDC----SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
            P  I +   L  +KFD     +  ++++L S L      S+ + + +   S P  L    
Sbjct: 627  PRGIDTLRHLHTIKFDVDIKDNKGKVQQLLSKLYNEETNSNPRPTESTTMSTPTKLKHSE 686

Query: 161  KMS-----KLDVEGNK---LTVLSNNLIASWTMLTE---LIASKNLLNGMPETIGSLSRL 209
            ++      +  V GNK     ++ NN   +  M       I  +NL   M E +  ++  
Sbjct: 687  EVPMGAGIQRYVMGNKPKGQAIIFNNHTFNGNMADRDGTGIDERNL-EKMFENL-DITVH 744

Query: 210  IRLDLHQNRILSIPSSISGCCSL--------------------AEFYMGNNALSALPAEL 249
            +  D+  N + +   +  G  S+                    A+F +G    S++P  +
Sbjct: 745  VYNDVTANDMETYIRACQGSESMKAVVVHPDAKKASLDVMPNEADFIIG---YSSVPGYV 801

Query: 250  G-KLSKLGT-----LDLHSNQ-LKEYCVEACQL------------RLSVLDLSNNSLSGL 290
              + ++ G+     +D H N+  KEY      L            R+  +DL +N L+ L
Sbjct: 802  SWRDTRRGSWYITKMDSHWNENEKEYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTL 861

Query: 291  PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
            P +I     L  L +  N L+ L  SL        L  L+  L +N +            
Sbjct: 862  PEDINYSQKLYYLNINNNKLKCLPESLCE------LTNLKQLLAKNNE------------ 903

Query: 351  MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
                              L  +P    E  ++  L++S N ++ LP  +    +L  L  
Sbjct: 904  ------------------LDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCA 945

Query: 411  SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD------IPMLQILDLSYNIAS 464
            + N I + PD  +  L  L+ L L NN  +  P+  F +      I +  +     ++ S
Sbjct: 946  NNNSISELPD--IRKLKKLTALYLGNNN-KTRPNSKFSECISNLPITLKTLWMFGNSLTS 1002

Query: 465  LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
            LPE+   S+L +L+EL ++  +L   P +I +L  L  L +  N L+S+P+   +L  L 
Sbjct: 1003 LPES--ISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD-ISSLKQLQ 1059

Query: 525  ELDLSDNNISALP 537
            +L L+DN +  LP
Sbjct: 1060 DLSLTDNKLEKLP 1072



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 35/223 (15%)

Query: 348  LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQ 406
            +  M +  +   KE      +L   P ++ E  + + K+DL  N +  LP +++    L 
Sbjct: 813  ITKMDSHWNENEKEYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLY 872

Query: 407  TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
             L ++ NK+K  P++ L  L++L  L   NN L  +P D F ++  L+ L++S N + SL
Sbjct: 873  YLNINNNKLKCLPES-LCELTNLKQLLAKNNELDTLP-DNFGELSKLEYLNISNNKVKSL 930

Query: 466  PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN----------------- 508
            PE+     L +L +L      + E P DI +L++L  L L  N                 
Sbjct: 931  PES--IGKLENLTQLCANNNSISELP-DIRKLKKLTALYLGNNNKTRPNSKFSECISNLP 987

Query: 509  -----------SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                       SL S+PE    L +L EL + +N + +LP E+
Sbjct: 988  ITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEI 1030


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL    L  +PNE+              + ++LQ L L HN +  L +++  L  L V
Sbjct: 96  TLNLDTNQLTTLPNEI-------------GQLINLQTLDLIHNQLVILPKEINQLQNLRV 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L  LP  IG+L  L++LD+  N +  +P+EIG    L   D S N L  LP  
Sbjct: 143 LGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   S+N + +LP+++     +  L +  N+LT L N  I     L EL   
Sbjct: 203 IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLG 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KNLL  +P+ +G L  L  LDL  NR+ ++P  I    +L E Y+G N  +ALP E+ +L
Sbjct: 262 KNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L L++NQLK    E  +L+ L VLDL++N L  LP EI K+  L++L L  N L
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQL 380



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 155/301 (51%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +PNE+              +  +LQ L L +N +  L  ++  L  L  L
Sbjct: 51  LDLSEQKLKTLPNEI-------------GQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ LP  IG+L  L++LD+  N ++ +P EI     L     S+NQLK LP  +
Sbjct: 98  NLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N + +LP ++     +  LD+  N LT+L    I     L EL  S 
Sbjct: 158 GQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKE-IGQLKNLRELYLSS 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L L  N++ ++P+ I    +L E Y+G N L+ LP E+G+L 
Sbjct: 217 NQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLK 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L TLDL +N+L     E  QL+ L  L L  N  + LP EI ++  L+ L L  N L+T
Sbjct: 277 NLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKT 336

Query: 313 L 313
           L
Sbjct: 337 L 337



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 38/372 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L  ++  L  L  L + +N+L+ LP  IG+L  L++L++  N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG    L   D   NQL  LP  + +  NL     SNN +  LP+++     +  
Sbjct: 106 TLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L  L N  I     L  L  SKN+L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 166 LDLYANQLKALPNE-IGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   ++ +N L+ LP E+G+L  L  L L  N L     E  QL+ L  LDLS
Sbjct: 225 EIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  LR+L L  N    L         P  ++ L++            
Sbjct: 285 NNRLTTLPKEIGQLKNLRELYLGTNQFTAL---------PKEIRQLQN------------ 323

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                      L V    L L    L  +P+EI +   +  LDL+ N ++ LP E+    
Sbjct: 324 -----------LQV----LFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQ 368

Query: 404 SLQTLILSRNKI 415
           +LQ L L  N++
Sbjct: 369 NLQRLYLQYNQL 380



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 169/369 (45%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L++L +  N +  +P+EIG    L   +  +NQL  LP+
Sbjct: 50  VLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+ +NL      +N +  LP+++     +  L +  N+L +L    I     L  L  
Sbjct: 110 EIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKE-IGQLENLQTLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  LDL +N +  +P  I    +L E Y+ +N L  LP E+G+
Sbjct: 169 YANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL     E  QL+ L  L L  N L+ LP E+G++  L  L L+ N L
Sbjct: 229 LENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +        LK LR                              EL L     +
Sbjct: 289 TTLPKEI------GQLKNLR------------------------------ELYLGTNQFT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           A+P EI +   +  L L+ N ++ LP E+    +LQ L L+ N++K  P  I   L +L 
Sbjct: 313 ALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEI-EKLQNLQ 371

Query: 431 CLKLDNNPL 439
            L L  N L
Sbjct: 372 RLYLQYNQL 380



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 185/365 (50%), Gaps = 27/365 (7%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP ++     +  L +  N+LT L N  I     L  L    N
Sbjct: 49  RVLDLSEQK-----LKTLPNEIGQLQNLQTLYLWNNQLTTLPNE-IGQLKNLQTLNLDTN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL  N+++ +P  I+   +L    + NN L  LP E+G+L  
Sbjct: 103 QLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLEN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TLDL++NQLK    E  QL+ L  LDLS N L+ LP EIG++  LR+L L+ N L+TL
Sbjct: 163 LQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
              +        L+ L++  L +N+     TT  + I     L     EL L    L+ +
Sbjct: 223 PKEI------GQLENLQTLHLSDNQ----LTTLPNEIGQLKNLY----ELYLGKNLLTTL 268

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P E+ +   +  LDLS N +  LP E+    +L+ L L  N+    P  I   L +L  L
Sbjct: 269 PKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEI-RQLQNLQVL 327

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L+NN L+ +P++  + +  LQ+LDL+ N + +LP+      L +LQ LYL+  QL    
Sbjct: 328 FLNNNQLKTLPNE-IEKLQNLQVLDLNDNQLKTLPK--EIEKLQNLQRLYLQYNQLSSEE 384

Query: 492 TDILR 496
            + +R
Sbjct: 385 KERIR 389



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 172/349 (49%), Gaps = 46/349 (13%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L  L L  N++ ++P+ I    +L    +  N L+ LP E+G+L  L
Sbjct: 58  LKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINL 117

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TLDL  NQL     E  QL+ L VL LSNN L  LP EIG++  L+ L L  N L+ L 
Sbjct: 118 QTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALP 177

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           + +        LK L++                              L L    L+ +P 
Sbjct: 178 NEI------GQLKNLQT------------------------------LDLSKNILTILPK 201

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   + +L LS N ++ LP E+    +LQTL LS N++   P+ I   L +L  L L
Sbjct: 202 EIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI-GQLKNLYELYL 260

Query: 435 DNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
             N L  +P +    K++P L   DLS N + +LP+      L +L+ELYL   Q    P
Sbjct: 261 GKNLLTTLPKEVGQLKNLPTL---DLSNNRLTTLPK--EIGQLKNLRELYLGTNQFTALP 315

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I +LQ L++L L+ N L+++P   + L +L  LDL+DN +  LP E+
Sbjct: 316 KEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEI 364



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L  +P+EI +   +  L L  N +  LP E+    +LQTL
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++   P+ I   L +L  L L +N L  +P +    +  L++L LS N +  LP+
Sbjct: 98  NLDTNQLTTLPNEI-GQLINLQTLDLIHNQLVILPKE-INQLQNLRVLGLSNNQLKILPK 155

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ L L   QL+  P +I +L+ L+ LDLS+N L  +P+    L +L EL 
Sbjct: 156 --EIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELY 213

Query: 528 LSDNNISALPPEL 540
           LS N +  LP E+
Sbjct: 214 LSSNQLKTLPKEI 226



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +PNE+       G+    +E      L L  N +  L +++  L  L  
Sbjct: 234 TLHLSDNQLTTLPNEI-------GQLKNLYE------LYLGKNLLTTLPKEVGQLKNLPT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S+N+L+ LP  IG+L  L+ L +  N    +P EI     L     ++NQLK LP+ 
Sbjct: 281 LDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + +  NL     ++N + +LP+++     + +L ++ N+L+
Sbjct: 341 IEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLS 381


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/409 (33%), Positives = 211/409 (51%), Gaps = 43/409 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+   + ++  D+  L  L VL++  N+L+ LP +IG+L  L SL +  N +  +
Sbjct: 28  LKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSL 87

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I   + L +     NQL  LP S+ +  NL++   S N +TSLPE +   S ++ LD
Sbjct: 88  PESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLD 147

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT L  + I   + LTEL    N L  +PE+I  LS L  L L  N++ S+P SI
Sbjct: 148 LGGNQLTSLPES-ITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESI 206

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           +   +L    +  N L++LP  + KLS L +L L SNQL         L  L+VLDL +N
Sbjct: 207 TKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSN 266

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P  I K++ L +L L GN L                    +RLPE+         
Sbjct: 267 QLTSMPESITKLSNLTELYLDGNQL--------------------TRLPES--------- 297

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                  T+LS  +K L L    L+ +P  I +   +TKL+LS N +  LP  +   ++L
Sbjct: 298 ------ITKLSNLTK-LDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNL 350

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR----QVPSDGFKDI 450
            +L L  N++   P++I T+LS+L  L L+NNPL     ++ + G ++I
Sbjct: 351 TSLYLRDNQLTILPESI-TTLSNLGWLYLNNNPLENPPIEIATKGIQEI 398



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 150/274 (54%), Gaps = 2/274 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L  N +  L E +  L  LT L +S NKL+ LP +IG+L  L SLD+  N +  
Sbjct: 96  NLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTS 155

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I   + L +     NQL  LP S+ +  NL++    +N +TSLPE +   S ++ L
Sbjct: 156 LPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSL 215

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NKLT L  + I   + LT L    N L  +PE+I +LS L  LDL  N++ S+P S
Sbjct: 216 DLSWNKLTSLPES-ITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPES 274

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L E Y+  N L+ LP  + KLS L  LDL +NQL        +L  L+ L+LS 
Sbjct: 275 ITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSW 334

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N L+ LP  IGK++ L  L L  N L  L  S+ 
Sbjct: 335 NKLTSLPESIGKLSNLTSLYLRDNQLTILPESIT 368



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 189/395 (47%), Gaps = 62/395 (15%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +P D+ +  ++  LD+  N+LT L  + I   + LT L    N L  +PE+I  LS 
Sbjct: 38  LTEVPGDVWELEQLEVLDLGSNELTSLPES-IGKLSNLTSLYLVNNKLTSLPESITKLSN 96

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L  N++ S+P SI+   +L E Y+  N L++LP  +GKLS               
Sbjct: 97  LTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLS--------------- 141

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                   L+ LDL  N L+ LP  I K++ L +L L  N L                  
Sbjct: 142 -------NLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQL------------------ 176

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
             + LPE+            IT  + L+    EL L    L+++P  I +   +T LDLS
Sbjct: 177 --TSLPES------------ITKLSNLT----ELYLGHNQLTSLPESITKLSNLTSLDLS 218

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP  ++  ++L +L L  N++   P++I T+LS+L+ L L +N L  +P    K
Sbjct: 219 WNKLTSLPESITKLSNLTSLYLGSNQLTSLPESI-TTLSNLTVLDLGSNQLTSMPESITK 277

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
              + ++      +  LPE+   + L +L +L LR  QL   P  I +L  L  L+LS N
Sbjct: 278 LSNLTELYLDGNQLTRLPES--ITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWN 335

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L S+PE    L++LT L L DN ++ LP  + ++
Sbjct: 336 KLTSLPESIGKLSNLTSLYLRDNQLTILPESITTL 370



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 177/359 (49%), Gaps = 42/359 (11%)

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           A +  L  L  S   L  +P  +  L +L  LDL  N + S+P SI    +L   Y+ NN
Sbjct: 23  AKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNN 82

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L++LP  + KLS L  L L  NQL        +L  L+ L LS N L+ LP  IGK++ 
Sbjct: 83  KLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSN 142

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L L GN L                    + LPE+            IT  + L+   
Sbjct: 143 LTSLDLGGNQL--------------------TSLPES------------ITKLSNLT--- 167

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
            EL L    L+++P  I +   +T+L L  N +  LP  ++  ++L +L LS NK+   P
Sbjct: 168 -ELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLP 226

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           ++I T LS+L+ L L +N L  +P +    +  L +LDL  N + S+PE+   + L +L 
Sbjct: 227 ESI-TKLSNLTSLYLGSNQLTSLP-ESITTLSNLTVLDLGSNQLTSMPES--ITKLSNLT 282

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           ELYL   QL   P  I +L  L  LDL  N L  +PE    L++LT+L+LS N +++LP
Sbjct: 283 ELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLP 341



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 126/221 (57%), Gaps = 1/221 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L HN +  L E +  L  LT L + HN+L+ LP +I +L  L SLD+S+N +  
Sbjct: 165 NLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTS 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I   + L      SNQL  LP S+    NL+     +N +TS+PE +   S +++L
Sbjct: 225 LPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTEL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++GN+LT L  + I   + LT+L    N L  +PE+I  LS L +L+L  N++ S+P S
Sbjct: 285 YLDGNQLTRLPES-ITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPES 343

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           I    +L   Y+ +N L+ LP  +  LS LG L L++N L+
Sbjct: 344 IGKLSNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLE 384



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 42/314 (13%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   Y+    L+ +P ++ +L +L  LDL SN+L        +L  L+ L L NN L+ L
Sbjct: 28  LKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSL 87

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  I K++ L +L L GN L                    + LPE+            IT
Sbjct: 88  PESITKLSNLTELYLDGNQL--------------------TSLPES------------IT 115

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
             + L+    EL L    L+++P  I +   +T LDL  N +  LP  ++  ++L  L L
Sbjct: 116 KLSNLT----ELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYL 171

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             N++   P++I T LS+L+ L L +N L  +P +    +  L  LDLS+N + SLPE+ 
Sbjct: 172 GHNQLTSLPESI-TKLSNLTELYLGHNQLTSLP-ESITKLSNLTSLDLSWNKLTSLPES- 228

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
             + L +L  LYL   QL   P  I  L  L +LDL  N L S+PE    L++LTEL L 
Sbjct: 229 -ITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYLD 287

Query: 530 DNNISALPPELVSV 543
            N ++ LP  +  +
Sbjct: 288 GNQLTRLPESITKL 301


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 193/394 (48%), Gaps = 39/394 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  LN++ N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 136 NLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLAT 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG+   L   D   NQL  LP  +G+  NL      NN +T+ P+++ D   +  L
Sbjct: 196 LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKIL 255

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    +     L E+ +SKN L  +P+ IG+L  L  L L  N++ ++P  
Sbjct: 256 SLGNNQLTTLPKE-VGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKE 314

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L + Y+  N L+ LP E+G L  L  L L +N+L  +  E   L +L  L L+ 
Sbjct: 315 IGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNK 374

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EIG +  L++L L+ N L T+   + N                         
Sbjct: 375 NQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIEN------------------------- 409

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                     L V    L L    L+A+P EI     + +LDL+ N +  LP E+ +  S
Sbjct: 410 -------LQNLQV----LDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQS 458

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           L++L LS N +  +P+ I   L  L  L+L+N P
Sbjct: 459 LESLDLSNNPLTSFPEEI-GKLQHLKRLRLENIP 491



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 199/414 (48%), Gaps = 66/414 (15%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G+  NL D   S+N + +LP+++    K+ KL++                     
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNL--------------------- 165

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
              ++N L  +PE IG L  L  LDL  N++ ++P  I    +L    +  N L+ LP E
Sbjct: 166 ---TRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKE 222

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +GKL  L  L L++N+L  +  E   L+ L +L L NN L+ LP E+GK+  L+++  + 
Sbjct: 223 IGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSK 282

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL   + N      L+ L+                              EL L   
Sbjct: 283 NQLTTLPKEIGN------LQNLQ------------------------------ELYLAHN 306

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+A+P EI     + +L L  N +  LP E+ +  +LQ L L  NK+  +P  I  +L 
Sbjct: 307 QLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEI-GNLQ 365

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
            L  L L+ N L  +P +   ++  L+ L+LS N + ++P+     +L +LQ L L   Q
Sbjct: 366 KLKWLGLNKNQLTTIPKE-IGNLQNLKELNLSSNQLTTIPKE--IENLQNLQVLDLNNNQ 422

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I  LQ L+ LDL+ N L ++P+   NL SL  LDLS+N +++ P E+
Sbjct: 423 LTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEI 476



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 3/129 (2%)

Query: 43  EAVDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E  +LQKL    L  N +  + +++ NL  L  LN+S N+L+ +P  I  L  L+ LD++
Sbjct: 360 EIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLN 419

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P EIG+   L + D +SN+L  LP  +G   +L     SNN +TS PE++   
Sbjct: 420 NNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKL 479

Query: 160 SKMSKLDVE 168
             + +L +E
Sbjct: 480 QHLKRLRLE 488


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 203/423 (47%), Gaps = 40/423 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+S N++  +P  I +L  L+SL +  N +  
Sbjct: 3   NLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT 62

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  +G+  NL     S N I ++P+++    K+  L
Sbjct: 63  LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 122

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     L  L  S N L  +P+ IG L  L  LDL  NR+ ++P  
Sbjct: 123 GLDNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 181

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +
Sbjct: 182 IGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 241

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L+ L L  N L TL   +        LK L++             
Sbjct: 242 NQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI------GQLKNLQT------------- 282

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                            L L+   L+ +P EI +   +  LDLS N ++ LP E+    +
Sbjct: 283 -----------------LDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKN 325

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           LQTL L  N++   P  I   L +L  L L+NN L  +P +    +  LQ L L+ N  S
Sbjct: 326 LQTLYLGYNQLTVLPKEI-GQLQNLKVLFLNNNQLTTLPKE-IGQLKNLQELYLNNNQLS 383

Query: 465 LPE 467
           + E
Sbjct: 384 IEE 386



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 183/404 (45%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 29  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 75

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 76  LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 135

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+LP+++     +  LD+  N+LT L    I     L EL   
Sbjct: 136 IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHLQNLQELYLV 194

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+G+L
Sbjct: 195 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQL 254

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL SNQL        QL+ L  LDL +N L+ LP EI ++  L+ L L+ N L+
Sbjct: 255 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLK 314

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +                            E L  + T        L L    L+ 
Sbjct: 315 TLPKEI----------------------------EQLKNLQT--------LYLGYNQLTV 338

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +   +  L L+ N +  LP E+    +LQ L L+ N++
Sbjct: 339 LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 382



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 176/359 (49%), Gaps = 23/359 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  +KN L  +P+ IG L  L +L+L  N+I +IP  I     L   Y+ NN L+ L
Sbjct: 4   LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 63

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L KL  L L  NQL     E  QL+ L  L+LS N +  +P EI K+  L+ L 
Sbjct: 64  PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLG 123

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KEL 362
           L  N L TL   +              +L   +  + ST +  L T+   +      + L
Sbjct: 124 LDNNQLTTLPQEI-------------GQLQNLQSLDLSTNR--LTTLPQEIGQLQNLQSL 168

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L    L+ +P EI     + +L L  N +  LP E+    +LQTL L  N++      I
Sbjct: 169 DLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 228

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L +L  L L +N L   P +    +  LQ+LDL  N + +LPE      L +LQ L 
Sbjct: 229 -EQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEG--IGQLKNLQTLD 284

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   QL   P +I +L+ L++LDLS N L+++P+  + L +L  L L  N ++ LP E+
Sbjct: 285 LDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEI 343



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 159/313 (50%), Gaps = 21/313 (6%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E  +L +L  L L NN L+ 
Sbjct: 3   NLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT 62

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LP EIG++  L+ L L  N L TL   +        LK L+S  L  N+        E L
Sbjct: 63  LPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLKSLNLSYNQIKTIPKEIEKL 116

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             + +        L L+   L+ +P EI +   +  LDLS N +  LP E+    +LQ+L
Sbjct: 117 QKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSL 168

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P++    +  LQ L+L  N + +L +
Sbjct: 169 DLSTNRLTTLPQEI-GHLQNLQELYLVSNQLTILPNE-IGQLKNLQTLNLRNNRLTTLSK 226

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +L+ L LR  QL   P +I +L+ L++LDL  N L ++PEG   L +L  LD
Sbjct: 227 --EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 284

Query: 528 LSDNNISALPPEL 540
           L  N ++ LP E+
Sbjct: 285 LDSNQLTTLPQEI 297



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +P E+                 +LQ+L L  N +  L  ++  L  L  
Sbjct: 167 SLDLSTNRLTTLPQEI-------------GHLQNLQELYLVSNQLTILPNEIGQLKNLQT 213

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ L   I +L  LKSLD+  N +   P EIG    L   D  SNQL  LP  
Sbjct: 214 LNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG 273

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+LP+++     +  LD+  N+L  L    I     L  L   
Sbjct: 274 IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKE-IEQLKNLQTLYLG 332

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            N L  +P+ IG L  L  L L+ N++ ++P  I    +L E Y+ NN LS
Sbjct: 333 YNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLS 383



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           + +LQEL L + QL   P +I +L+ LR L+LS N +++IP+  + L  L  L L +N +
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 534 SALPPEL 540
           + LP E+
Sbjct: 61  TTLPQEI 67


>gi|194743396|ref|XP_001954186.1| GF18150 [Drosophila ananassae]
 gi|190627223|gb|EDV42747.1| GF18150 [Drosophila ananassae]
          Length = 782

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 240/511 (46%), Gaps = 19/511 (3%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D WW  V L  L L+ N +  L   + NL  LTVL +  N L ELP  IG+L  L  L
Sbjct: 239 EEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLEKLMRL 298

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +VS N +  +P EI S   L   + S N+ KEL   +     L      +N I SLP  +
Sbjct: 299 NVSHNKLSHLPREIYSLPDLRHLNISYNEFKELDPDISDLHMLEFLDGGHNNIQSLPGGI 358

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               +++ L +  N +  L  +L+ +   L ++   +N L G+P+ +G L +L  L L  
Sbjct: 359 GFLVRLTTLLLPYNHIKELPPDLV-NMRSLQKIELEQNDLIGLPDDMGLLRKLECLYLQH 417

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL 275
           N IL +P    G  SL E +  NN +  +P  +   L  L  LDL  N++ E   E C L
Sbjct: 418 NDILELP-DFEGNESLNELHASNNFIKTIPKSMCSNLPHLKILDLRDNKITELPDELCLL 476

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           R L+ LD+SNNS+S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R  
Sbjct: 477 RNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQCGTTRILKTLHERAM 536

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI---WEAGEITKLDLSRNS 391
            N++   S    D  + +  +SVT   L     +   IP      ++      L ++   
Sbjct: 537 ANKEEGGS----DAASTSGGISVT--RLRGGHTDTGDIPENFPDRYKLRHTRTLAVNLEQ 590

Query: 392 IQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
           + E+P ++   A    +  +  +RN++   P+ +      L+ L L NN +  VP    +
Sbjct: 591 LTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQLTELVLSNNLIGHVPQFISQ 650

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
              +  +   +  +  LP+   F  L  L+EL +   + +  P  I  LQ L I   S+N
Sbjct: 651 FTRISYMNLSNNLLNDLPKE--FGVLVTLRELNVANNRFQFIPNGIYELQGLEIFIASEN 708

Query: 509 SLQSI-PEGFKNLTSLTELDLSDNNISALPP 538
            ++ +   G + +  LT LDL +N+I  +PP
Sbjct: 709 HIKQLNVSGLQCMPRLTTLDLRNNDIDNVPP 739



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 61/330 (18%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L +L++  NK++ELP  +  L  L  LDVS NSI  +P  + S   L+      N 
Sbjct: 452 NLPHLKILDLRDNKITELPDELCLLRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNP 511

Query: 126 LKELPSSLGRC------------------------------LNLSDFKASNNCITSLPED 155
           +K +   + +C                              ++++  +  +     +PE+
Sbjct: 512 IKTIRRDILQCGTTRILKTLHERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPEN 571

Query: 156 LADCSKMSK-----------------------------LDVEGNKLTVLSNNLIASWTML 186
             D  K+                               +D   N+L+ L N L      L
Sbjct: 572 FPDRYKLRHTRTLAVNLEQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQL 631

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           TEL+ S NL+  +P+ I   +R+  ++L  N +  +P       +L E  + NN    +P
Sbjct: 632 TELVLSNNLIGHVPQFISQFTRISYMNLSNNLLNDLPKEFGVLVTLRELNVANNRFQFIP 691

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             + +L  L       N +K+  V    C  RL+ LDL NN +  +PP +G +T +  L 
Sbjct: 692 NGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDLRNNDIDNVPPILGNLTNITHLE 751

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L GNP R  R  ++   T A++ YLR R+P
Sbjct: 752 LVGNPFRQPRHQILMKGTEAIMSYLRDRIP 781



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 211/494 (42%), Gaps = 98/494 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  L  +P E+Y                DL+ L +++N  ++L  D+ +L +L  L
Sbjct: 298 LNVSHNKLSHLPREIYS-------------LPDLRHLNISYNEFKELDPDISDLHMLEFL 344

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  HN +  LP  IG L  L +L + +N I ++P ++ +  +L K +   N L  LP  +
Sbjct: 345 DGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDDM 404

Query: 134 G-----RCLNLS--------DFK---------ASNNCITSLPEDLADCSKMSKL---DVE 168
           G      CL L         DF+         ASNN I ++P+ +  CS +  L   D+ 
Sbjct: 405 GLLRKLECLYLQHNDILELPDFEGNESLNELHASNNFIKTIPKSM--CSNLPHLKILDLR 462

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI------ 222
            NK+T L + L      LT L  S N ++ +P T+ SL+ LI L +  N I +I      
Sbjct: 463 DNKITELPDELCL-LRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQ 521

Query: 223 ------------------------PSSISGCCSLAEFYMGNNALSALPAEL---GKLSKL 255
                                    +S SG  S+     G+     +P       KL   
Sbjct: 522 CGTTRILKTLHERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPENFPDRYKLRHT 581

Query: 256 GTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPL 310
            TL ++  QL E   +  QL     + V+D + N LS LP  +  M   L +L+L+ N +
Sbjct: 582 RTLAVNLEQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQLTELVLSNNLI 641

Query: 311 RTLRSSLVNGPTPALL-KYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                    G  P  + ++ R S +  + +      KE  +       VT +EL++    
Sbjct: 642 ---------GHVPQFISQFTRISYMNLSNNLLNDLPKEFGVL------VTLRELNVANNR 686

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLS 427
              IP+ I+E   +     S N I++L      C   L TL L  N I + P  IL +L+
Sbjct: 687 FQFIPNGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDLRNNDIDNVP-PILGNLT 745

Query: 428 SLSCLKLDNNPLRQ 441
           +++ L+L  NP RQ
Sbjct: 746 NITHLELVGNPFRQ 759



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 189/458 (41%), Gaps = 73/458 (15%)

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           MK  D   +   L   D SSN L  L S +    +L+     +N +  LP ++    K+ 
Sbjct: 237 MKEEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLEKLM 296

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L+V  NKL+ L                        P  I SL  L  L++  N    + 
Sbjct: 297 RLNVSHNKLSHL------------------------PREIYSLPDLRHLNISYNEFKELD 332

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             IS    L     G+N + +LP  +G L +L TL L  N +KE   +   +R L  ++L
Sbjct: 333 PDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIEL 392

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA- 341
             N L GLP ++G +  L  L L  N +                      LP+ E +E+ 
Sbjct: 393 EQNDLIGLPDDMGLLRKLECLYLQHNDIL--------------------ELPDFEGNESL 432

Query: 342 ----------STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                      T  + + +    L +    L L    ++ +P E+     +T+LD+S NS
Sbjct: 433 NELHASNNFIKTIPKSMCSNLPHLKI----LDLRDNKITELPDELCLLRNLTRLDVSNNS 488

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD-- 449
           I  LP  LSS A L +L +  N IK     IL    +   LK  +        +G  D  
Sbjct: 489 ISVLPVTLSSLAHLISLQVDGNPIKTIRRDIL-QCGTTRILKTLHERAMANKEEGGSDAA 547

Query: 450 -----IPMLQILDLSYNIASLPEN-PPFSSLPHLQELYLRRMQLREAPTDILRL---QQL 500
                I + ++     +   +PEN P    L H + L +   QL E P  + +L   + +
Sbjct: 548 STSGGISVTRLRGGHTDTGDIPENFPDRYKLRHTRTLAVNLEQLTEVPEQVFQLAKEEGV 607

Query: 501 RILDLSQNSLQSIPEGFKNL-TSLTELDLSDNNISALP 537
            ++D ++N L ++P G +++   LTEL LS+N I  +P
Sbjct: 608 HVVDFARNQLSTLPNGLQHMREQLTELVLSNNLIGHVP 645



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +  LDLS N++  L  ++ + ASL  L L  N + + P  I   L  L  L + +
Sbjct: 244 WNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEI-GKLEKLMRLNVSH 302

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P + +  +P L+ L++SYN                        + +E   DI  
Sbjct: 303 NKLSHLPREIYS-LPDLRHLNISYN------------------------EFKELDPDISD 337

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   N++QS+P G   L  LT L L  N+I  LPP+LV++
Sbjct: 338 LHMLEFLDGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNM 384


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 232/498 (46%), Gaps = 66/498 (13%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   +Q L L  N + ++  ++  L  L  LN+++N+L+E P AI  L  LKSL++S N
Sbjct: 162 FQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGN 221

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
               +P  IG  + LV F   S+++K LP ++G   NL +   S+  I  LPE +    +
Sbjct: 222 KFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQ 281

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + KL ++ N++      +I   + L  L   KN L  +PE+IG+L +L  L L  N +  
Sbjct: 282 IGKLALDNNRIEKFP-AVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKK 340

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 280
           +P SI     L    +  N L ALPA +GKLS+L  L+L  NQL     +  Q L L+ L
Sbjct: 341 LPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQL 400

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L+ N L+ LPP++  +  L  L L+ N L+ L  SL        LK L           
Sbjct: 401 KLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSL------GKLKNLH---------- 444

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                               +LS++G  L+ +P  I     ++ L+LS N +Q LP  L 
Sbjct: 445 --------------------QLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLG 484

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              +L  L +  NK+ + P  I                          D+  L +L L+Y
Sbjct: 485 KLKNLHQLSVDGNKLTELPKIIY-------------------------DLKKLFLLSLNY 519

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           N + +LPE+     L  +  L L   QL + P  I +L ++  L+L  N L  +P+   N
Sbjct: 520 NALTALPES--IGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGN 577

Query: 520 LTSLTELDLSDNNISALP 537
           + SL  L+L +N ++ LP
Sbjct: 578 MRSLYALNLKNNQLTKLP 595



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 229/492 (46%), Gaps = 75/492 (15%)

Query: 52  LAHNNIEKLKEDLRNL--PLLT--VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           L HN I     D++NL  P+L+   LN+    L +LP  + ++  +++L +  N + +IP
Sbjct: 127 LKHNLI-----DIQNLKHPVLSSSTLNLLEFGLEKLPPLVFQIPKIQTLCLQSNRLTEIP 181

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
            EI   T L + + ++NQL E P ++     L     S N    +P ++   SK+    +
Sbjct: 182 TEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTL 241

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
           + +++  L                        PET+G+LS L  L L   RI  +P S+ 
Sbjct: 242 KSDRIKAL------------------------PETMGTLSNLQNLTLSSCRIQQLPESMQ 277

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
               + +  + NN +   PA + KLS L  L L  NQLK        LR LS L LSNN 
Sbjct: 278 QLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNH 337

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L  LP  IG +  L  L +  N L  L         PA +  L         SE      
Sbjct: 338 LKKLPDSIGNLAQLMVLSVARNQLDAL---------PATIGKL---------SEL----- 374

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                        +EL+LE   LS +P ++ +   +T+L L+ N +  LPP+LS+   L 
Sbjct: 375 -------------RELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLSNLQQLS 421

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
            L LS N+++  P + L  L +L  L +D N L  +P  G  ++  L +L+LSYN +  L
Sbjct: 422 LLNLSYNQLQVLPKS-LGKLKNLHQLSVDGNKLTHLPP-GIGNLHRLSLLNLSYNQLQVL 479

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P++     L +L +L +   +L E P  I  L++L +L L+ N+L ++PE    L+ +  
Sbjct: 480 PKS--LGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVH 537

Query: 526 LDLSDNNISALP 537
           L+L  N ++ LP
Sbjct: 538 LNLEGNQLTQLP 549



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 190/427 (44%), Gaps = 55/427 (12%)

Query: 2   DRILKAARTSGSL-NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           DRI     T G+L NL N +L            +  E  +  + +   KL L +N IEK 
Sbjct: 244 DRIKALPETMGTLSNLQNLTLSSC------RIQQLPESMQQLKQIG--KLALDNNRIEKF 295

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              +  L  L  L +  N+L  LP +IG L  L  L +S N + K+PD IG+   L+   
Sbjct: 296 PAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLS 355

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            + NQL  LP+++G+   L +     N ++ LP+ +     +++L +  NKLT L    +
Sbjct: 356 VARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPK-L 414

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++   L+ L  S N L  +P+++G L  L +L +  N++  +P  I     L+   +  N
Sbjct: 415 SNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYN 474

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP  LGKL  L  L +  N+L E       L +L +L L+ N+L+ LP  IG+++ 
Sbjct: 475 QLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSK 534

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           +  L L GN L                    ++LPE+    +                  
Sbjct: 535 VVHLNLEGNQL--------------------TQLPESIGQLSKVV--------------- 559

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN------ 413
             L+LEG  L+ +P  I     +  L+L  N + +LP  +     L+ L+L +N      
Sbjct: 560 -HLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKNPIPTHE 618

Query: 414 --KIKDW 418
             +I DW
Sbjct: 619 KQRITDW 625



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 157/343 (45%), Gaps = 51/343 (14%)

Query: 203 IGSLSRLIRLDLHQNRI----LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           I  ++R  R  L  N I    L  P   S   +L EF      L  LP  + ++ K+ TL
Sbjct: 116 IAHINRGYRFGLKHNLIDIQNLKHPVLSSSTLNLLEF-----GLEKLPPLVFQIPKIQTL 170

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L SN+L E   E  QL  L  L+L+NN L+  P  I  +TTL+ L L+GN    +  ++
Sbjct: 171 CLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCVPVNI 230

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G    L+ +              T K D I                     A+P  + 
Sbjct: 231 --GKLSKLVTF--------------TLKSDRI--------------------KALPETMG 254

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
               +  L LS   IQ+LP  +     +  L L  N+I+ +P A++T LSSL  LKL  N
Sbjct: 255 TLSNLQNLTLSSCRIQQLPESMQQLKQIGKLALDNNRIEKFP-AVITKLSSLVYLKLQKN 313

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L+ +P +   ++  L  L LS N +  LP++    +L  L  L + R QL   P  I +
Sbjct: 314 QLKHLP-ESIGNLRKLSHLSLSNNHLKKLPDS--IGNLAQLMVLSVARNQLDALPATIGK 370

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L +LR L+L QN L  +P+    + +LT+L L+ N ++ LPP+
Sbjct: 371 LSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPK 413


>gi|327274772|ref|XP_003222150.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Anolis carolinensis]
          Length = 871

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 157/505 (31%), Positives = 246/505 (48%), Gaps = 56/505 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L +N I+ + +++R L  L +L++  N+L+ LP  IG L  L++L++  N +  +
Sbjct: 180 LNYLYLNNNEIKIIPKEIRQLTGLEILSIERNRLTSLPPEIGLLQNLRTLNLRHNQLTGL 239

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PDE               QL EL   L           S+N I   P  L     +  LD
Sbjct: 240 PDEFS-------------QLSELKYLL----------FSHNNIEKFPSALTTLRSLEVLD 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GNK+T++ N  +     L  L  ++N +   P+ +  L  + +L+L +N I S+P  I
Sbjct: 277 LSGNKVTLIEN--LTEMKKLNILYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPKEI 334

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSN 284
               +L E  + NN L  LP +L +L +L  + L  NQL+     VE  Q +L  L+LS 
Sbjct: 335 EELKTLKELSLSNNRLIFLPIQLFQLIQLEKMRLDCNQLESLSDKVENLQ-KLQDLNLSK 393

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N    +   I K T L +L L+ N  + L ++L        LKYL+         E    
Sbjct: 394 NLFQNITDNISKCTMLERLNLSDNQFKKLPNNLYQ------LKYLK---------ELHLN 438

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSA---IPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           +  LI +   ++  +KELS+  ++ +A   IP EI    EI K+DLS N +   P  L +
Sbjct: 439 RNQLILLDEHIAF-NKELSVLEVSENALMYIPVEIKNCTEIIKIDLSCNKLALFPMGLCA 497

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK--DIPMLQILDLS 459
             +L+ L LS N I +    I T +S +  L+  N    ++PS       +  L  LDLS
Sbjct: 498 LVALRHLNLSGNYISE----ITTEISFIKYLQYLNLSKNKLPSFSIHLCTLSRLNYLDLS 553

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           YN I+S+P N     +  L+ L L   +    P ++  L QL++LDLS+N +Q IP   K
Sbjct: 554 YNQISSIPTN--VQKMKSLRTLLLHHSKFILFPRELCALNQLKVLDLSENKIQFIPSDIK 611

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
           +L  L EL+LS+NN ++ P E+  +
Sbjct: 612 DLEELKELNLSNNNFASFPVEICQI 636



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 236/503 (46%), Gaps = 24/503 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L HN +  L ++   L  L  L  SHN + + P+A+  L  L+ LD+S N +  
Sbjct: 225 NLRTLNLRHNQLTGLPDEFSQLSELKYLLFSHNNIEKFPSALTTLRSLEVLDLSGNKVTL 284

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I + +     L     + N++K  P +L    N+S    S N I SLP+++ +   + +L
Sbjct: 285 I-ENLTEMKKLNILYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPKEIEELKTLKEL 343

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L   L      L ++    N L  + + + +L +L  L+L +N   +I  +
Sbjct: 344 SLSNNRLIFLPIQLF-QLIQLEKMRLDCNQLESLSDKVENLQKLQDLNLSKNLFQNITDN 402

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEYCVEACQLRLSVLDL 282
           IS C  L    + +N    LP  L +L  L  L L+ NQ   L E+   A    LSVL++
Sbjct: 403 ISKCTMLERLNLSDNQFKKLPNNLYQLKYLKELHLNRNQLILLDEHI--AFNKELSVLEV 460

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S N+L  +P EI   T + K+ L+ N L      L      AL+      L  N  SE  
Sbjct: 461 SENALMYIPVEIKNCTEIIKIDLSCNKLALFPMGLC-----ALVALRHLNLSGNYISEI- 514

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           TT+   I     L+++  +L    ++L  +         +  LDLS N I  +P  +   
Sbjct: 515 TTEISFIKYLQYLNLSKNKLPSFSIHLCTL-------SRLNYLDLSYNQISSIPTNVQKM 567

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YN 461
            SL+TL+L  +K   +P   L +L+ L  L L  N ++ +PSD  KD+  L+ L+LS  N
Sbjct: 568 KSLRTLLLHHSKFILFPRE-LCALNQLKVLDLSENKIQFIPSD-IKDLEELKELNLSNNN 625

Query: 462 IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            AS P E     SL  L       ++L+  P +I +L  L+ LD+S N LQ +P+    +
Sbjct: 626 FASFPVEICQILSLQKLTICQKNGLKLKSLPEEISKLLVLKELDISYNELQEMPKSIGEI 685

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +L  L  ++N    LP    S+
Sbjct: 686 KTLVTLIANNNFFKKLPSSFSSL 708



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 240/531 (45%), Gaps = 64/531 (12%)

Query: 35  AGEGDKWWEAVDLQKLILAHNNIEK----------------------LKEDLRNLPLLTV 72
            G  D++ +  +L+ L+ +HNNIEK                      L E+L  +  L +
Sbjct: 237 TGLPDEFSQLSELKYLLFSHNNIEKFPSALTTLRSLEVLDLSGNKVTLIENLTEMKKLNI 296

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ NK+   P A+  L  +  L++S N I  +P EI     L +   S+N+L  LP  
Sbjct: 297 LYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPKEIEELKTLKELSLSNNRLIFLPIQ 356

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L + + L   +   N + SL + + +  K+  L++  N    +++N I+  TML  L  S
Sbjct: 357 LFQLIQLEKMRLDCNQLESLSDKVENLQKLQDLNLSKNLFQNITDN-ISKCTMLERLNLS 415

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N    +P  +  L  L  L L++N+++ +   I+    L+   +  NAL  +P E+   
Sbjct: 416 DNQFKKLPNNLYQLKYLKELHLNRNQLILLDEHIAFNKELSVLEVSENALMYIPVEIKNC 475

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +++  +DL  N+L  + +  C L  L  L+LS N +S +  EI  +  L+ L L+ N L 
Sbjct: 476 TEIIKIDLSCNKLALFPMGLCALVALRHLNLSGNYISEITTEISFIKYLQYLNLSKNKLP 535

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           +    L    T + L YL   L  N+ S   T  + + ++ T L   SK           
Sbjct: 536 SFSIHLC---TLSRLNYL--DLSYNQISSIPTNVQKMKSLRTLLLHHSK--------FIL 582

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSL 429
            P E+    ++  LDLS N IQ +P ++     L+ L LS N    +P  I  + SL  L
Sbjct: 583 FPRELCALNQLKVLDLSENKIQFIPSDIKDLEELKELNLSNNNFASFPVEICQILSLQKL 642

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
           +  + +   L+ +P +  K + +L+ LD+SYN                        +L+E
Sbjct: 643 TICQKNGLKLKSLPEEISK-LLVLKELDISYN------------------------ELQE 677

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P  I  ++ L  L  + N  + +P  F +L +L  L+L +N I  LP ++
Sbjct: 678 MPKSIGEIKTLVTLIANNNFFKKLPSSFSSLRNLQHLNLKENEIQRLPSDM 728



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 211/449 (46%), Gaps = 42/449 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L  L L  N ++   + L  LP ++ LN+S N +  LP  I EL  LK L +S N 
Sbjct: 290 EMKKLNILYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPKEIEELKTLKELSLSNNR 349

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++ +P ++     L K     NQL+ L   +     L D   S N   ++ ++++ C+ +
Sbjct: 350 LIFLPIQLFQLIQLEKMRLDCNQLESLSDKVENLQKLQDLNLSKNLFQNITDNISKCTML 409

Query: 163 SKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMP 200
            +L++  N+   L NNL                      IA    L+ L  S+N L  +P
Sbjct: 410 ERLNLSDNQFKKLPNNLYQLKYLKELHLNRNQLILLDEHIAFNKELSVLEVSENALMYIP 469

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I + + +I++DL  N++   P  +    +L    +  N +S +  E+  +  L  L+L
Sbjct: 470 VEIKNCTEIIKIDLSCNKLALFPMGLCALVALRHLNLSGNYISEITTEISFIKYLQYLNL 529

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL-- 317
             N+L  + +  C L RL+ LDLS N +S +P  + KM +LR LLL  +        L  
Sbjct: 530 SKNKLPSFSIHLCTLSRLNYLDLSYNQISSIPTNVQKMKSLRTLLLHHSKFILFPRELCA 589

Query: 318 -----VNGPTPALLKYLRSRLPENED-SEASTTKEDLITMATRLS--VTSKELSL---EG 366
                V   +   ++++ S + + E+  E + +  +  +    +   ++ ++L++    G
Sbjct: 590 LNQLKVLDLSENKIQFIPSDIKDLEELKELNLSNNNFASFPVEICQILSLQKLTICQKNG 649

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           + L ++P EI +   + +LD+S N +QE+P  +    +L TLI + N  K  P +  +SL
Sbjct: 650 LKLKSLPEEISKLLVLKELDISYNELQEMPKSIGEIKTLVTLIANNNFFKKLPSS-FSSL 708

Query: 427 SSLSCLKLDNNPLRQVPSD-----GFKDI 450
            +L  L L  N ++++PSD     G +DI
Sbjct: 709 RNLQHLNLKENEIQRLPSDMHLLVGLRDI 737



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           + L    L  IP+ + +   +  L L+ N I+ +P E+     L+ L + RN++   P  
Sbjct: 160 IQLNAKGLLEIPTGVLDMKMLNYLYLNNNEIKIIPKEIRQLTGLEILSIERNRLTSLPPE 219

Query: 422 I----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           I                       + LS L  L   +N + + PS     +  L++LDLS
Sbjct: 220 IGLLQNLRTLNLRHNQLTGLPDEFSQLSELKYLLFSHNNIEKFPS-ALTTLRSLEVLDLS 278

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
            N  +L EN   + +  L  LYL   +++  P  +  L  +  L+LS+N +QS+P+  + 
Sbjct: 279 GNKVTLIEN--LTEMKKLNILYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPKEIEE 336

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L EL LS+N +  LP +L  +
Sbjct: 337 LKTLKELSLSNNRLIFLPIQLFQL 360


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/420 (32%), Positives = 209/420 (49%), Gaps = 31/420 (7%)

Query: 34  EAGEGDKWW---EAV----DLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++   EA+    D++ L L      N +  L +++ NL  L  LN++ N+ + 
Sbjct: 83  EADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLNSNQFTT 142

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L++LD+S N +  +P EIG+   L   D + NQLK LP  + +   L   
Sbjct: 143 LPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEAL 202

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN +T+LP+++    K+  L +  N+LT L    I +   L EL  + N    +PE 
Sbjct: 203 HLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKE-IGNLQNLQELNLNSNQFTTLPEE 261

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L +L +L L  +R+ ++P  I    +L E  + +N  + LP E+G L KL  LDL+ 
Sbjct: 262 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNY 321

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           +QL     E  +L +L  L L+ N L  LP EIGK+  L+ L L+ N L TL   + N  
Sbjct: 322 SQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGN-- 379

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEA 379
               L+ L+         E       L T+  ++    K  EL L G  L  +P EI   
Sbjct: 380 ----LQNLK---------ELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNL 426

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  L+L+ N +  LP E+ +  SL++L LS N +  +P+ I   L  L  L L  NP 
Sbjct: 427 QNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEEI-GKLQKLKWLYLGGNPF 485



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 206/421 (48%), Gaps = 66/421 (15%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L  LP  +G   NL +   ++N  T+LPE++ +  K+  LD+  N+LT L      
Sbjct: 113 GGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTL------ 166

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG+L +L  LDL QN++ ++P  I     L   ++GNN 
Sbjct: 167 ------------------PKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNE 208

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ LP E+ KL KL  L L +N+L     E   L+ L  L+L++N  + LP EIG +  L
Sbjct: 209 LTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKL 268

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           +KL L  + L TL   + N      L+ L+                              
Sbjct: 269 QKLSLAHSRLTTLPKEIGN------LQNLQ------------------------------ 292

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL+L     + +P EI    ++ KLDL+ + +  LP E+     LQ L L++N++K  P 
Sbjct: 293 ELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPK 352

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            I   L +L  L L +N L  +P +   ++  L+ LDL  N + +LPE     +L  LQE
Sbjct: 353 EI-GKLQNLKNLSLSHNELTTLPKE-IGNLQNLKELDLGGNQLTTLPEK--IGNLQKLQE 408

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L+L   +L+  P +I  LQ L+ L+L+ N L ++P+   NL SL  L+LS N++++ P E
Sbjct: 409 LFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEE 468

Query: 540 L 540
           +
Sbjct: 469 I 469



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 40/328 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L+   L+ +P E+ K                L+ L L +N +  L +++  L  L  
Sbjct: 178 TLDLAQNQLKTLPKEIEK-------------LQKLEALHLGNNELTTLPKEIEKLQKLEA 224

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K   + ++L  LP  
Sbjct: 225 LHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKE 284

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N  T+LPE++ +  K+ KLD+  ++LT L    I     L +L  +
Sbjct: 285 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKE-IGKLQKLQKLSLA 343

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P+ IG L  L  L L  N + ++P  I    +L E  +G N L+ LP ++G L
Sbjct: 344 QNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNL 403

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLS 288
            KL  L L  N+LK    E   L+                        L  L+LS NSL+
Sbjct: 404 QKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLT 463

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             P EIGK+  L+ L L GNP   LRS 
Sbjct: 464 SFPEEIGKLQKLKWLYLGGNPF--LRSQ 489


>gi|332020817|gb|EGI61215.1| Leucine-rich repeat-containing protein 40 [Acromyrmex echinatior]
          Length = 607

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 264/592 (44%), Gaps = 112/592 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD---------------KWWEAVDLQ 48
           I+  AR +G LNLS++ L  VP++++ N +E  E +               +WWE   L+
Sbjct: 30  IIIGARKTGQLNLSSKGLSTVPDKIW-NINELTEEELRDLHFELDYEPLEERWWEQEPLK 88

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNV----SHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L ++ N++  +   +  L  L  LN+    S N L ELP  IG L  LK L++S N + 
Sbjct: 89  MLDMSCNSLTVIDNKIELLTELNTLNICINYSFNLLEELPPEIGSLRKLKVLNLSDNRLK 148

Query: 105 KIPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            +P E                       IG    L   D S N L+ELP  +G  + L  
Sbjct: 149 NLPHEFYMLEELCELYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVRLKT 208

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N I  LP D+ +   +  LD+  N+L ++                          
Sbjct: 209 LNLCQNMIKELPPDVTNMRSLKTLDISFNQLEIIP------------------------- 243

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDL 260
            +G L ++ R+    N +   P  ISGC +L   ++ NN +S + P  L  +  L  L +
Sbjct: 244 PLGELRKVERIMFQSNNLQEFPD-ISGCSALTVLHLDNNNISEIDPQRLEVVGHLKQLTM 302

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N ++    E  +L  L V DLS+N++S +P  IG +  L++  + GN ++ +R  ++ 
Sbjct: 303 QNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGDIIR 362

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKE-------DLITMATRLSVTSKELSLEGMNLSAI 372
             TP +L ++R  +  N    +  T+E       ++I     +   ++  SL G NLS I
Sbjct: 363 CGTPRILTHIRQTVDVNT---SMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEI 419

Query: 373 PSEIWE-AGEI--TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             EI E A E+  T +DLSRN +  LP ++S+  ++  L L+ N +   P+ I       
Sbjct: 420 SEEILEDAAEVSVTTIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWI------- 472

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
                          + +K    LQILD+S N + SLP N     L +L+++ +   +  
Sbjct: 473 --------------GEKYK---CLQILDISKNHLQSLPSN--IGCLKYLRDIDISFNRFT 513

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGF-KNLTSLTELDLSDNNISALPPE 539
           E P  I  ++ L  L  + N +  I     + L  L  L+L++NNI+ +PPE
Sbjct: 514 ELPETIYDVEALESLIANDNQIAKIDVPLLEKLKRLAVLNLTNNNIAHIPPE 565



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 26/290 (8%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATAL------VKFD 120
           L V ++SHN +S +P  IG L  LK   +  N+I  I  +I   G+   L      V  +
Sbjct: 320 LEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGDIIRCGTPRILTHIRQTVDVN 379

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLP------------EDLADCSKMSKLDVE 168
            S N  + L  S+   ++   +   N  + SL             ED A+ S ++ +D+ 
Sbjct: 380 TSMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEISEEILEDAAEVS-VTTIDLS 438

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRILSIPSSIS 227
            NKL+ L N + A  T+ T+L  + N L  +PE IG   + ++ LD+ +N + S+PS+I 
Sbjct: 439 RNKLSGLPNKMSAIVTV-TDLKLTSNHLASLPEWIGEKYKCLQILDISKNHLQSLPSNIG 497

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNN 285
               L +  +  N  + LP  +  +  L +L  + NQ+ +  V   +   RL+VL+L+NN
Sbjct: 498 CLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQIAKIDVPLLEKLKRLAVLNLTNN 557

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +++ +PPE+G +  LR LLL+GN  +  R +++   T  +L YLR+ +P+
Sbjct: 558 NIAHIPPELGNLKNLRNLLLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 607



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 212/479 (44%), Gaps = 87/479 (18%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R    LNLS+  L+++P+E Y                +L +L L  N I  L+ ++ +L 
Sbjct: 135 RKLKVLNLSDNRLKNLPHEFYM-------------LEELCELYLRSNQISILEAEIGDLI 181

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +LT +++S+N L ELP  +G L  LK+L++  N I ++P ++ +  +L   D S NQL+ 
Sbjct: 182 MLTYMDLSYNNLRELPIGMGYLVRLKTLNLCQNMIKELPPDVTNMRSLKTLDISFNQLEI 241

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P  LG    +      +N +   P D++ CS ++ L ++ N ++ +    +     L +
Sbjct: 242 IPP-LGELRKVERIMFQSNNLQEFP-DISGCSALTVLHLDNNNISEIDPQRLEVVGHLKQ 299

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N++  +PE I  L  L   DL  N I  IP  I    +L +F +  N +  +  +
Sbjct: 300 LTMQNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGD 359

Query: 249 LGKL----------------SKLGTLDL---------HSNQL------------------ 265
           + +                 + + T +L         H ++                   
Sbjct: 360 IIRCGTPRILTHIRQTVDVNTSMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEI 419

Query: 266 -KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------- 313
            +E   +A ++ ++ +DLS N LSGLP ++  + T+  L LT N L +L           
Sbjct: 420 SEEILEDAAEVSVTTIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWIGEKYKCL 479

Query: 314 ------RSSLVNGPTP-ALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
                 ++ L + P+    LKYLR   +  N  +E   T  D+  + + ++  ++     
Sbjct: 480 QILDISKNHLQSLPSNIGCLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQ----- 534

Query: 366 GMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
              ++ I   + E    +  L+L+ N+I  +PPEL +  +L+ L+LS N  K    AIL
Sbjct: 535 ---IAKIDVPLLEKLKRLAVLNLTNNNIAHIPPELGNLKNLRNLLLSGNCFKYPRQAIL 590



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 35/305 (11%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           M  N+L+ +  ++  L++L TL++        C+          + S N L  LPPEIG 
Sbjct: 92  MSCNSLTVIDNKIELLTELNTLNI--------CI----------NYSFNLLEELPPEIGS 133

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+ L L+ N L+ L            L YLRS    N+ S       DLI +     
Sbjct: 134 LRKLKVLNLSDNRLKNLPHEFYMLEELCEL-YLRS----NQISILEAEIGDLIMLTY--- 185

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
                + L   NL  +P  +     +  L+L +N I+ELPP++++  SL+TL +S N+++
Sbjct: 186 -----MDLSYNNLRELPIGMGYLVRLKTLNLCQNMIKELPPDVTNMRSLKTLDISFNQLE 240

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P   L  L  +  +   +N L++ P         L +L L  N  S  +      + H
Sbjct: 241 IIPP--LGELRKVERIMFQSNNLQEFPD--ISGCSALTVLHLDNNNISEIDPQRLEVVGH 296

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L++L ++   +   P +I++L  L + DLS N++  IP     L +L +  +  NNI  +
Sbjct: 297 LKQLTMQNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNI 356

Query: 537 PPELV 541
             +++
Sbjct: 357 RGDII 361



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 27/201 (13%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITK-------LDLSRNSIQELPPELS-------SCAS 404
           + +L+L    LS +P +IW   E+T+        +L    ++E   E         SC S
Sbjct: 37  TGQLNLSSKGLSTVPDKIWNINELTEEELRDLHFELDYEPLEERWWEQEPLKMLDMSCNS 96

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLS-CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           L  +    NKI+     +LT L++L+ C+    N L ++P +    +  L++L+LS N +
Sbjct: 97  LTVI---DNKIE-----LLTELNTLNICINYSFNLLEELPPE-IGSLRKLKVLNLSDNRL 147

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
            +LP    F  L  L ELYLR  Q+     +I  L  L  +DLS N+L+ +P G   L  
Sbjct: 148 KNLPHE--FYMLEELCELYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVR 205

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  L+L  N I  LPP++ ++
Sbjct: 206 LKTLNLCQNMIKELPPDVTNM 226


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 224/455 (49%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++GR + L+      N +TS+P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                DL           ++
Sbjct: 481 VLDLEENKIESL---------PNEIGFLR----------------DL-----------QK 504

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   ++++P  I     +T L +  N++  LP E+ +  +L +L ++ N  + + P 
Sbjct: 505 LILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPF 564

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL Q+P +     P L I
Sbjct: 565 E-LALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 207/453 (45%), Gaps = 65/453 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKLSE+P  + +L  L +L + FN +  
Sbjct: 176 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRY 235

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N+++ELP+ +G+ +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 236 VSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTL 295

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG L  L RL L  NR+ SIP S
Sbjct: 296 DLQHNELL------------------------DIPDTIGRLVLLTRLGLRYNRLTSIPKS 331

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  ++L
Sbjct: 332 LANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINL 391

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            +N +  +P  I  +   L KL +  N L  L         P  +    + +  N  +  
Sbjct: 392 EHNKIDKIPYGIFSRAKNLAKLNMKENQLTAL---------PLDIGTWVNMVELNLGTNQ 442

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T   D I     L V    L L    L  IP+ I    ++  LDL  N I+ LP E+  
Sbjct: 443 LTKIPDDIQCLQNLEV----LILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGF 498

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y 
Sbjct: 499 LRDLQKLILQSNQVTSLPRAI-GHLTNLTYLSVGENNLNYLP----EEIGTLENLDSLYV 553

Query: 461 ----NIASLP--------------ENPPFSSLP 475
               N+ +LP              EN P S +P
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIP 586



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 218/456 (47%), Gaps = 28/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+S ++I  +P  +   T LV+F    N+L  LP  +G   NL     S N +TSL
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 190

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL+ + + ++   T LT L    N +  + + I +L+ L  L
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 250 SLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 309

Query: 273 CQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----RSSLVNGPTPALLK 327
            +L L + L L  N L+ +P  +     + +  + GN +  L     +SL +  T  L +
Sbjct: 310 GRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSR 369

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    ++ +                   ++LE   +  IP  I+  A  + KL+
Sbjct: 370 NAFTAYPSGGPAQFTNVYS---------------INLEHNKIDKIPYGIFSRAKNLAKLN 414

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+  
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-S 472

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L +
Sbjct: 473 IANLRKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSV 530

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +N+L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 531 GENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 566



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 5/183 (2%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           E  L G  L  +P EI   G +  L LS NS+  LP  L +  SL+ L L  NK+ + PD
Sbjct: 156 EFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPD 215

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            +   L++L+ L L  N +R V SD  +++  L +L L  N I  LP       L +L  
Sbjct: 216 VVY-KLTNLTTLFLRFNRVRYV-SDNIRNLTNLTMLSLRENKIRELPAG--IGKLVNLIT 271

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
             +    L   P +I    QL  LDL  N L  IP+    L  LT L L  N ++++P  
Sbjct: 272 FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVLLTRLGLRYNRLTSIPKS 331

Query: 540 LVS 542
           L +
Sbjct: 332 LAN 334


>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Metaseiulus occidentalis]
          Length = 608

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 251/586 (42%), Gaps = 100/586 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV----------YKNFD---EAGEGDKWWEAVDLQKL 50
           ++K+AR SG L L NR   ++P+ V           K+ D   +    D WW  + L KL
Sbjct: 33  LIKSARKSGQLALQNRGFTELPSVVCNLNNLSEQEVKSIDVTLDRASQDDWWTQMPLSKL 92

Query: 51  ILA-----------------------HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            L                         NNI KL + + +L  L  LN+SHNK++ELP  +
Sbjct: 93  FLGSNRLTTLPPEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCL 152

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             L  L+ L +  N I  + D I S  +L   D S N+LKELP +            +NN
Sbjct: 153 CHLKDLRVLALHHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANN 212

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
           C+ +LP D+    ++  LD+  N LT L                        PE IG   
Sbjct: 213 CLEALPADMDSMIQLVLLDLSNNCLTKL------------------------PEAIGRCG 248

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLK 266
            L +L    NR+ ++P   S    L E  +  NA+          L  L  LDL SN+L 
Sbjct: 249 HLEQLVARHNRLETLPP-FSRENHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLA 307

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E   L+ L  LD+ NN L  LP  +G +  +  LL+ GNPLR++R  ++   T  L
Sbjct: 308 SLPEEIANLQSLERLDIGNNELKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYL 367

Query: 326 LKYLRSRLPENEDSEA-----STTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEA 379
           +KYLR RL E+   +          ++L+    R ++ +SK L      LS +  ++ + 
Sbjct: 368 MKYLRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDM 427

Query: 380 G---EITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
               +I +L L+RN    +P  L   A  L  L  S NK+   P   L+    L  + L 
Sbjct: 428 ACEDKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFNKLTSIP-PFLSQAKHLQYMNLQ 486

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           +N L  +P                         P  S L +++EL + + +  + P  + 
Sbjct: 487 SNQLSDLP-------------------------PELSCLENIRELNISQNRFSKIPDCVY 521

Query: 496 RLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPEL 540
             ++  IL  S NSL SI  E    + +L  LDL +N+IS +PPEL
Sbjct: 522 GWKRFEILLASDNSLTSIDVENLAKIETLATLDLRNNSISQVPPEL 567



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 156/359 (43%), Gaps = 72/359 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMK 105
           L++L+  HN +E L    R    L  L+VS N + E      E L MLK LD+  N +  
Sbjct: 250 LEQLVARHNRLETLPPFSRE-NHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLAS 308

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL--------- 156
           +P+EI +  +L + D  +N+LK LP+SLG   +++      N + S+ +D+         
Sbjct: 309 LPEEIANLQSLERLDIGNNELKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYLM 368

Query: 157 ---------------------ADCSKM------------SKLDVEGNKLTVLSNNLI--A 181
                                 D  ++              LD     L+ L   +I  A
Sbjct: 369 KYLRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMA 428

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
               + +L+ ++N+   +P+T+  L++ L  LD   N++ SIP  +S    L    + +N
Sbjct: 429 CEDKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQSN 488

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQL----------------------- 275
            LS LP EL  L  +  L++  N+  +   CV   +                        
Sbjct: 489 QLSDLPPELSCLENIRELNISQNRFSKIPDCVYGWKRFEILLASDNSLTSIDVENLAKIE 548

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            L+ LDL NNS+S +PPE+G +  ++ L L GN  R  R +++   T  +L YLR R+P
Sbjct: 549 TLATLDLRNNSISQVPPELGNLIQIKSLQLDGNLFRNPRPAILAKSTQDILAYLRDRIP 607



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 30/207 (14%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-------- 413
           L L+  N+S +P ++     + +L+LS N + ELP  L     L+ L L  N        
Sbjct: 115 LELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCLCHLKDLRVLALHHNEIKSVSDN 174

Query: 414 ---------------KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
                          K+K+ PDA  T LS    + L NN L  +P+D    +  L +LDL
Sbjct: 175 INSLLSLDDLDLSHNKLKELPDA-FTFLSRTKKINLANNCLEALPAD-MDSMIQLVLLDL 232

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           S N +  LPE        HL++L  R  +L   P    R   L+ L +S N+++    G 
Sbjct: 233 SNNCLTKLPE--AIGRCGHLEQLVARHNRLETLPP-FSRENHLKELSVSFNAIKEFNVGH 289

Query: 518 -KNLTSLTELDLSDNNISALPPELVSV 543
            + L  L  LDL  N +++LP E+ ++
Sbjct: 290 CEALVMLKILDLRSNKLASLPEEIANL 316



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    ++KL L  N +  LPPE++    L  L L  N I   P   + SLS+L  L L +
Sbjct: 84  WTQMPLSKLFLGSNRLTTLPPEIAQLEHLTILELQDNNISKLPQQ-MESLSNLIRLNLSH 142

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N + ++P D    +  L++L L +N                        +++    +I  
Sbjct: 143 NKMTELP-DCLCHLKDLRVLALHHN------------------------EIKSVSDNINS 177

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LDLS N L+ +P+ F  L+   +++L++N + ALP ++ S+
Sbjct: 178 LLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANNCLEALPADMDSM 224


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 188/372 (50%), Gaps = 43/372 (11%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++ + +L+E+P AI  L  L+ LD+  N + K+P+ I S + L   + S+N+L E+P
Sbjct: 23  TKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVP 82

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            ++     L       N +T +PE +A  +++ KL +  N+LT +    IAS + L  L 
Sbjct: 83  EAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEA-IASLSQLQTLN 141

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + N L  +PE I SLS+L RL+L  N++  +P +I+    L   Y+ NN L  +P  + 
Sbjct: 142 LNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIA 201

Query: 251 KLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            L++L  L L  N+L    E      QLR   L+LSNN L+ LP  I  +T L++L L G
Sbjct: 202 SLTQLQRLSLSDNELTAVPEAIASLSQLR--SLNLSNNQLTELPEAIASLTQLQELYLVG 259

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L                    + LPE             I   T+L    +EL L G 
Sbjct: 260 NQL--------------------TELPEA------------IASLTQL----QELYLVGN 283

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+A+P  I    ++ +L LS N +  +P  ++S   LQ L LS N++   P+AI  SLS
Sbjct: 284 ELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAI-ASLS 342

Query: 428 SLSCLKLDNNPL 439
            L  L LD+NPL
Sbjct: 343 QLQELYLDDNPL 354



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 181/375 (48%), Gaps = 61/375 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            LQ+L L  N + K+ E + +L  L +LN+S+NKL+E+P AI  L  L++L++ +N + +
Sbjct: 44  QLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTE 103

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I + T L K   S+NQL ++P ++     L     + N +T +PE +A  S++ +L
Sbjct: 104 VPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRL 163

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT +    IAS T L  L  + N L  +PE I SL++L RL L  N + ++P +
Sbjct: 164 NLSYNQLTEVPET-IASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEA 222

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I+    L    + NN L+ LP  +  L++L  L L  NQL E                  
Sbjct: 223 IASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTE------------------ 264

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
               LP  I  +T L++L L GN L  +  ++ +                          
Sbjct: 265 ----LPEAIASLTQLQELYLVGNELTAVPEAIAS-------------------------- 294

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              +T   RLS++  E       L+A+P  I     +  LDLS N + ++P  ++S + L
Sbjct: 295 ---LTQLQRLSLSDNE-------LTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQL 344

Query: 406 QTLILSRNKIKDWPD 420
           Q L L  N +   PD
Sbjct: 345 QELYLDDNPLN--PD 357



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 181/384 (47%), Gaps = 64/384 (16%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +PE +A  +++ +LD++ N+LT +    IAS + L  L  S N L  +PE I SLS+
Sbjct: 32  LTEVPEAIATLTQLQRLDLDCNQLTKVPEA-IASLSQLQILNLSNNKLTEVPEAIASLSQ 90

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L+L  N++  +P +I+    L + Y+ NN L+ +P  +  LS+L TL+L+ NQL E 
Sbjct: 91  LQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEV 150

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L +L  L+LS N L+ +P  I  +T L  L L  N LR                
Sbjct: 151 PEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLR---------------- 194

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
               ++PE   S         +T   RLS++  EL+       A+P  I    ++  L+L
Sbjct: 195 ----KVPEAIAS---------LTQLQRLSLSDNELT-------AVPEAIASLSQLRSLNL 234

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S N + ELP  ++S   LQ L L  N++ + P+AI  SL+ L  L L  N L  VP    
Sbjct: 235 SNNQLTELPEAIASLTQLQELYLVGNQLTELPEAI-ASLTQLQELYLVGNELTAVPE--- 290

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                                   +SL  LQ L L   +L   P  I  L  L+ LDLS 
Sbjct: 291 ----------------------AIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSY 328

Query: 508 NSLQSIPEGFKNLTSLTELDLSDN 531
           N L  +PE   +L+ L EL L DN
Sbjct: 329 NQLTQVPEAIASLSQLQELYLDDN 352



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 37/309 (11%)

Query: 14  LNLSNRSLRDVP------------NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNLSN  L +VP            N +Y    E  E         LQKL L++N + ++ 
Sbjct: 71  LNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATL--TQLQKLYLSNNQLTQVP 128

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E + +L  L  LN++ N+L+E+P AI  L  L+ L++S+N + ++P+ I S T L     
Sbjct: 129 EAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYL 188

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           ++NQL+++P ++     L     S+N +T++PE +A  S++  L++  N+LT L    IA
Sbjct: 189 NNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEA-IA 247

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S T L EL    N L  +PE I SL++L  L L  N + ++P +I+    L    + +N 
Sbjct: 248 SLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNE 307

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L+A+P  +  L+ L  LDL  NQL +                      +P  I  ++ L+
Sbjct: 308 LTAVPEAIASLTHLQGLDLSYNQLTQ----------------------VPEAIASLSQLQ 345

Query: 302 KLLLTGNPL 310
           +L L  NPL
Sbjct: 346 ELYLDDNPL 354



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 172/350 (49%), Gaps = 42/350 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE I +L++L RLDL  N++  +P +I+    L    + NN L+ +P  +  LS+L
Sbjct: 32  LTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQL 91

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL+L  N+L E       L +L  L LSNN L+ +P  I  ++ L+ L L  N L    
Sbjct: 92  QTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQL---- 147

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           + +PE             I   ++L    + L+L    L+ +P 
Sbjct: 148 ----------------TEVPEA------------IASLSQL----RRLNLSYNQLTEVPE 175

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            I    ++  L L+ N ++++P  ++S   LQ L LS N++   P+AI  SLS L  L L
Sbjct: 176 TIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAI-ASLSQLRSLNL 234

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
            NN L ++P +    +  LQ L L  N +  LPE    +SL  LQELYL   +L   P  
Sbjct: 235 SNNQLTELP-EAIASLTQLQELYLVGNQLTELPE--AIASLTQLQELYLVGNELTAVPEA 291

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           I  L QL+ L LS N L ++PE   +LT L  LDLS N ++ +P  + S+
Sbjct: 292 IASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASL 341



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 5/162 (3%)

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           TKLDL    + E+P  +++   LQ L L  N++   P+AI  SLS L  L L NN L +V
Sbjct: 23  TKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAI-ASLSQLQILNLSNNKLTEV 81

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P +    +  LQ L+L YN +  +PE    ++L  LQ+LYL   QL + P  I  L QL+
Sbjct: 82  P-EAIASLSQLQTLNLIYNKLTEVPE--AIATLTQLQKLYLSNNQLTQVPEAIASLSQLQ 138

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L+L+ N L  +PE   +L+ L  L+LS N ++ +P  + S+
Sbjct: 139 TLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASL 180



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 13/135 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNLSN  L ++P  +                  LQ+L L  N + +L E + +L  L  
Sbjct: 231 SLNLSNNQLTELPEAIAS-------------LTQLQELYLVGNQLTELPEAIASLTQLQE 277

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P AI  L  L+ L +S N +  +P+ I S T L   D S NQL ++P +
Sbjct: 278 LYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEA 337

Query: 133 LGRCLNLSDFKASNN 147
           +     L +    +N
Sbjct: 338 IASLSQLQELYLDDN 352


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 20/373 (5%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT-E 188
           P  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +     + T  
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLN 192

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI ++  L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E
Sbjct: 193 LIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  
Sbjct: 251 IGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 308 NPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
           N L TL         P  ++ L++ R+ + ++++ +T  ++++ + + L V    L+L  
Sbjct: 311 NQLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQV----LALGS 356

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             LS +P EI +   +  L L  N +  LP E+    +LQ L L  N++  +P  I   L
Sbjct: 357 NRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI-RQL 415

Query: 427 SSLSCLKLDNNPL 439
            +L  L L  NPL
Sbjct: 416 KNLQELHLYLNPL 428



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 194/398 (48%), Gaps = 38/398 (9%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLQNLQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL   
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L TL   +  G    L  
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL-- 234

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWE 378
                             E L+    R++   KE         L L    L+ +P EI +
Sbjct: 235 ------------------EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQ 276

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + +LDL +N +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN 
Sbjct: 277 LQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQ 335

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P +  + +  LQ+L L  N +++LP+      L +LQ L L   QL   P +I +L
Sbjct: 336 LTTLPKEVLR-LQSLQVLALGSNRLSTLPKE--IGQLQNLQVLALISNQLTTLPKEIGQL 392

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           Q L+ L L +N L + P+  + L +L EL L  N +S+
Sbjct: 393 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 137/269 (50%), Gaps = 25/269 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L++    +  
Sbjct: 141 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 200

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 201 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 260

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L                        P+ IG L  L RLDLHQN++ ++P  
Sbjct: 261 DLHQNQLTIL------------------------PKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLALISNQLTTL 385



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 183/400 (45%), Gaps = 66/400 (16%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           ++ +   T L + L +  K+  LD+   KLT+L                        P+ 
Sbjct: 31  ESESGTYTDLAKTLQNPLKVRTLDLRYQKLTIL------------------------PKE 66

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L RLDL  N +  +P  I    +L E  +  N+L+ LP E+G+L  L  LDLH 
Sbjct: 67  IGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 126

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL        
Sbjct: 127 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL-------- 178

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++                            K L+L    L+ +P EI E   
Sbjct: 179 -PKEIGQLQN---------------------------LKTLNLIVTQLTTLPKEIGELQN 210

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  
Sbjct: 211 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTI 269

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ L
Sbjct: 270 LPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           R+LDL  N L ++P+    L SL  L L  N +S LP E+
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 267 LTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTL 385

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 166/301 (55%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++  LR+VP E+              +   L  L L  N +  +  ++  L  L  L
Sbjct: 33  LYLNDNQLRNVPAEI-------------GQLTSLVTLDLHANQLTSVPAEIGQLTSLVRL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ +PA IG+L  L  L +S N ++ +P EIG  T+L     S NQL  +P+ +
Sbjct: 80  DLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEI 139

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L+    SNN +TS+P ++   + +++L + GNKLT +    I   T L +L  + 
Sbjct: 140 GQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAE-IGQLTSLEKLDLAG 198

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L+LH N++ S+P+ I    SL E Y+  N L+++PAE+G+L+
Sbjct: 199 NQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLT 258

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +L L +NQL+    E  QL  L  L L +N L+ LP EIG++T+L  L L GN L +
Sbjct: 259 SLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQLTS 318

Query: 313 L 313
           L
Sbjct: 319 L 319



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 38/338 (11%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL ++ N+L  +PA IG+L  L +LD+  N +  +P EIG  T+LV+ D  
Sbjct: 23  EVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQ 82

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  +P+ +G+  +L+    S N + S+P ++   + ++ L +  N+LT +    I  
Sbjct: 83  VNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAE-IGQ 141

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T L  L  S N L  +P  IG L+ L  L L+ N++ S+P+ I    SL +  +  N L
Sbjct: 142 LTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQL 201

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++LPAE+G+L  L  L+LH+NQL     E  QL  L+ L L+ N L+ +P EIG++T+L 
Sbjct: 202 TSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLTSLE 261

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N LR + +                                 I   T L    K 
Sbjct: 262 SLFLGNNQLRNVLAE--------------------------------IGQLTSL----KW 285

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           L LE   L+++P+EI +   +  L L+ N +  LP E+
Sbjct: 286 LYLEDNKLTSLPAEIGQLTSLMMLHLNGNQLTSLPAEI 323



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 178/382 (46%), Gaps = 63/382 (16%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++++L+++G  LT      +   + L  L  + N L  +P  IG L+ L+ LDLH N++
Sbjct: 4   GRVNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQL 63

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P+ I    SL    +  N L+++PAE+G+L+ L  L L  NQL     E  QL  L+
Sbjct: 64  TSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLA 123

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L LS N L+ +P EIG++T+L  L ++ N L ++         PA +  L S       
Sbjct: 124 HLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSV---------PAEIGQLTSL------ 168

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                 EL L G  L+++P+EI +   + KLDL+ N +  LP E
Sbjct: 169 ---------------------TELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAE 207

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +    SL  L L  N++   P  I   L+SL+ L L+ N L  VP++             
Sbjct: 208 IGQLMSLTELNLHANQLTSVPAEI-GQLTSLTELYLNANQLTSVPAE------------- 253

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
                          L  L+ L+L   QLR    +I +L  L+ L L  N L S+P    
Sbjct: 254 ------------IGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIG 301

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            LTSL  L L+ N +++LP E+
Sbjct: 302 QLTSLMMLHLNGNQLTSLPAEI 323



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 37/259 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LS   L  VP E+              +   L  L L+ N +  +  ++  L  L  
Sbjct: 101 GLFLSRNQLLSVPAEI-------------GQLTSLAHLYLSRNQLTSVPAEIGQLTSLAH 147

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L+ +PA IG+L  L  L ++ N +  +P EIG  T+L K D + NQL  LP+ 
Sbjct: 148 LYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAE 207

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ ++L++     N +TS+P +                        I   T LTEL  +
Sbjct: 208 IGQLMSLTELNLHANQLTSVPAE------------------------IGQLTSLTELYLN 243

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  L L  N++ ++ + I    SL   Y+ +N L++LPAE+G+L
Sbjct: 244 ANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQL 303

Query: 253 SKLGTLDLHSNQLKEYCVE 271
           + L  L L+ NQL     E
Sbjct: 304 TSLMMLHLNGNQLTSLPAE 322


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 203/414 (49%), Gaps = 45/414 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT-ELI 190
            +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +     + T  LI
Sbjct: 112 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 171

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            ++  L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E+G
Sbjct: 172 VTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIG 229

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  LDLH NQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N 
Sbjct: 230 QLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 289

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L TL         P  +  L++                            +EL L+   L
Sbjct: 290 LTTL---------PKEIGQLQN---------------------------LQELCLDENQL 313

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P EI +   +  LDL  N +  LP E+    SLQ L L  N++   P  I   L +L
Sbjct: 314 TTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI-GQLQNL 372

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L L +N L  +P +    +  LQ L L  N + + P+      L +LQEL+L
Sbjct: 373 QVLGLISNQLTTLPKE-IGQLQNLQELCLDENQLTTFPKE--IRQLKNLQELHL 423



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 188/395 (47%), Gaps = 39/395 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++  N+L+ LP  IG+L  L+ LD++ N +  
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L + D   NQL  LP  +G+  NL         +T+LP+++ +   +  L
Sbjct: 132 LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L+  +N +  +P+ IG L  L  LDLHQN++ ++P  
Sbjct: 192 NLLDNQLTTLPKE-IGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  L L  
Sbjct: 251 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI ++  LR L L  N L TL         P  +  L+S             
Sbjct: 311 NQLTTLPKEIEQLQNLRVLDLDNNQLTTL---------PKEVLRLQS------------- 348

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                     L V    L+L    LS +P EI +   +  L L  N +  LP E+    +
Sbjct: 349 ----------LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQN 394

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           LQ L L  N++  +P  I   L +L  L L  NPL
Sbjct: 395 LQELCLDENQLTTFPKEI-RQLKNLQELHLYLNPL 428



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 187/403 (46%), Gaps = 61/403 (15%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT L                        P+ +G L  
Sbjct: 60  LTILPKEIGQLRNLQELDLSFNSLTTL------------------------PKEVGQLEN 95

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL   
Sbjct: 96  LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 155

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L TL   +  G    L  
Sbjct: 156 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL-- 211

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWE 378
                             E L+    R++   KE         L L    L+ +P EI +
Sbjct: 212 ------------------EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQ 253

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + +LDL +N +  LP E+    +LQ L L +N++   P  I   L +L  L LD N 
Sbjct: 254 LQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQ 312

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P +  + +  L++LDL  N + +LP+      L  LQ L L   +L   P +I +L
Sbjct: 313 LTTLPKE-IEQLQNLRVLDLDNNQLTTLPKE--VLRLQSLQVLALGSNRLSTLPKEIGQL 369

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           Q L++L L  N L ++P+    L +L EL L +N ++  P E+
Sbjct: 370 QNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 412



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 175/400 (43%), Gaps = 66/400 (16%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           ++ +   T L + L +  K+  LD+   KLT+L                        P+ 
Sbjct: 31  ESESGTYTDLAKALQNPLKVRTLDLRYQKLTIL------------------------PKE 66

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  LDL  N + ++P  +    +L    +  N L+ LP E+G+L  L  LDL+S
Sbjct: 67  IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNS 126

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QLR L  LDL  N L+ LP EIG++  L+ L L    L TL   +  G 
Sbjct: 127 NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI--GE 184

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
              L                                  K L+L    L+ +P EI E   
Sbjct: 185 LQNL----------------------------------KTLNLLDNQLTTLPKEIGELQN 210

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L  N I  LP E+    +LQ L L +N++   P  I   L +L  L L  N L  
Sbjct: 211 LEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTT 269

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ L
Sbjct: 270 LPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           R+LDL  N L ++P+    L SL  L L  N +S LP E+
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 25/269 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 184 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 243

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL       N +T+LP+++     +
Sbjct: 244 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 303

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L ++ N+LT L                        P+ I  L  L  LDL  N++ ++
Sbjct: 304 QELCLDENQLTTL------------------------PKEIEQLQNLRVLDLDNNQLTTL 339

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L 
Sbjct: 340 PKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELC 399

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  N L+  P EI ++  L++L L  NPL
Sbjct: 400 LDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 162/334 (48%), Gaps = 42/334 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL   ++  +P  I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E
Sbjct: 53  LDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL         P  +  L+
Sbjct: 113 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIGQLQ 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            K L+L    L+ +P EI E   +  L+L  N
Sbjct: 164 N---------------------------LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  +P +    +
Sbjct: 197 QLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDL  N + +LP+      L +LQ L L + QL   P +I +LQ L+ L L +N 
Sbjct: 255 QNLQRLDLHQNQLTTLPKE--IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L ++P+  + L +L  LDL +N ++ LP E++ +
Sbjct: 313 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL 346



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 14/251 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              E  +L+ L+L  N I  L +++  L  L  
Sbjct: 190 TLNLLDNQLTTLPKEI-------------GELQNLEILVLRENRITALPKEIGQLQNLQW 236

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L + D   NQL  LP  
Sbjct: 237 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +     N +T+LP+++     +  LD++ N+LT L   ++   + L  L   
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQVLALG 355

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +P+ IG L  L  L L  N++ ++P  I    +L E  +  N L+  P E+ +L
Sbjct: 356 SNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415

Query: 253 SKLGTLDLHSN 263
             L  L L+ N
Sbjct: 416 KNLQELHLYLN 426



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 215/436 (49%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LTSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 215/451 (47%), Gaps = 48/451 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++   T L  L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P G  +LT+LT L L +N ++ LP E+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 192/400 (48%), Gaps = 42/400 (10%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S   I  LP  + + +++++L +  NKL  L    +     L  L  S+N L  +P+++ 
Sbjct: 108 SKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLD 166

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L +L  LDL  N++  IPS +    SLA  Y+  N ++ +  ++  LSKL  L +  N+
Sbjct: 167 NLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENK 226

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +K+   E  +L  L  LD+++N L  LP EIG  T +  L L  N L  L  ++ N    
Sbjct: 227 IKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGN---- 282

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          LS  S+ L L    LSAIP  + +  E+ 
Sbjct: 283 -------------------------------LSSLSR-LGLRYNRLSAIPKSLAKCSELD 310

Query: 384 KLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +L+L  N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++
Sbjct: 311 ELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKI 370

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P   F    +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L 
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLE 428

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 429 VLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 44/275 (16%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           C E   +RL   DLS  S+  LP  + ++T L +L L  N L++L         PA +  
Sbjct: 97  CREENSMRL---DLSKRSIHMLPSAVKELTQLTELYLYSNKLQSL---------PAEVGC 144

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                 +L+T+A           L   +L+++P  +    ++  LDL 
Sbjct: 145 LV----------------NLMTLA-----------LSENSLTSLPDSLDNLKKLRMLDLR 177

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++E+P  +    SL TL L  N+I      I  +LS L+ L +  N ++Q+P++   
Sbjct: 178 HNKLREIPSVVYRLTSLATLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQLPAE-IG 235

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           ++  L  LD+++N +  LPE     S   +  L L+  +L + P  I  L  L  L L  
Sbjct: 236 ELCNLITLDVAHNQLEHLPEE--IGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           N L +IP+     + L EL+L +NNIS LP  L+S
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISTLPEGLLS 328



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 225/455 (49%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + D+S N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++GR ++L+      N +TS+P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP +I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                DL           ++
Sbjct: 481 VLDLEENKIESL---------PNEIGFLR----------------DL-----------QK 504

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   ++++P  I     +T L +  N++  LP E+ +  +L +L ++ N  + + P 
Sbjct: 505 LILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPF 564

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL  +P +     P L I
Sbjct: 565 E-LALCTNLSIMSIENCPLSHIPPEIVAGGPSLVI 598



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 207/453 (45%), Gaps = 65/453 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKLSE+P  + +L  L +L + FN +  
Sbjct: 176 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRY 235

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N+++ELP+ +G+ +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 236 VSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTL 295

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG L  L RL L  NR+ SIP S
Sbjct: 296 DLQHNELL------------------------DIPDTIGRLVSLTRLGLRYNRLTSIPKS 331

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  ++L
Sbjct: 332 LANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINL 391

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            +N +  +P  I  +   L KL +  N L  L         P  +    + +  N  +  
Sbjct: 392 EHNKIDKIPYAIFSRAKNLAKLNMKENQLTAL---------PLDIGTWVNMVELNLGTNQ 442

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T   D I     L V    L L    L  IP+ I    ++  LDL  N I+ LP E+  
Sbjct: 443 LTKIPDDIQCLQNLEV----LILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGF 498

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y 
Sbjct: 499 LRDLQKLILQSNQVTSLPRAI-GHLTNLTYLSVGENNLNYLP----EEIGTLENLDSLYV 553

Query: 461 ----NIASLP--------------ENPPFSSLP 475
               N+ +LP              EN P S +P
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSHIP 586



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 218/456 (47%), Gaps = 28/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+S ++I  +P  +   T LV+F    N+L  LP  +G   NL     S N +TSL
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 190

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL+ + + ++   T LT L    N +  + + I +L+ L  L
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 250 SLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 309

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----RSSLVNGPTPALLK 327
            +L  L+ L L  N L+ +P  +     + +  + GN +  L     +SL +  T  L +
Sbjct: 310 GRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSR 369

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    ++ +                   ++LE   +  IP  I+  A  + KL+
Sbjct: 370 NAFTAYPSGGPAQFTNVYS---------------INLEHNKIDKIPYAIFSRAKNLAKLN 414

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+  
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-S 472

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L +
Sbjct: 473 IANLRKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSV 530

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +N+L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 531 GENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 566



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           E  L G  L  +P EI   G +  L LS NS+  LP  L +  SL+ L L  NK+ + PD
Sbjct: 156 EFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPD 215

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            +   L++L+ L L  N +R V SD  +++  L +L L  N I  LP       L +L  
Sbjct: 216 VVY-KLTNLTTLFLRFNRVRYV-SDNIRNLTNLTMLSLRENKIRELPAG--IGKLVNLIT 271

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
             +    L   P +I    QL  LDL  N L  IP+    L SLT L L  N ++++P  
Sbjct: 272 FDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVSLTRLGLRYNRLTSIPKS 331

Query: 540 LVS 542
           L +
Sbjct: 332 LAN 334


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 166/545 (30%), Positives = 238/545 (43%), Gaps = 91/545 (16%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMK 105
           LQ+L+L  NN+  L  ++ +L  LT L V +N L  LP  + E + +L+ L    N + +
Sbjct: 73  LQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQR 132

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G A +L +     NQL+ LP  LG C +L +   + N +T+LP  LA  S + +L
Sbjct: 133 LPREVGWARSLKRLVAYVNQLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRL 192

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V  N+L  L   L                        G L  L RLDL  NR+L +P  
Sbjct: 193 NVSSNRLVHLGPQL------------------------GDLPDLERLDLRFNRLLRLPDE 228

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-------------- 271
           +     L    + +N L++LPA L  LS L  L ++ N+L     +              
Sbjct: 229 LGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAELSLRA 288

Query: 272 -----------ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
                      A    L  LDL++N L  LPP +G +  L  L L  N L  L + L   
Sbjct: 289 NRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELC-- 346

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               L +     L +N   E       +  +A         L +    L+A+P  I +  
Sbjct: 347 ---GLSQLAELELQDNALEELPAELGQMEKLA--------HLDVRNNQLTALPPSIGQLV 395

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  LD   N I +LPPEL + +SL  L LS N+I D P+           L L  N L 
Sbjct: 396 KLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLER-LLLGYNQLS 454

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P+ G   +  L +L LS N + +LP  P    L  L+ELY+    L E PT++ RL  
Sbjct: 455 TLPA-GLNQLTHLTVLSLSGNRLTTLP--PVVFDLTWLKELYVAANGLTELPTEVGRLTT 511

Query: 500 LRILDL-----------------------SQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L ILDL                       S N L S+P    NL SL E+DLS N ++ L
Sbjct: 512 LEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTL 571

Query: 537 PPELV 541
           PPEL 
Sbjct: 572 PPELA 576



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 236/494 (47%), Gaps = 44/494 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            DL +L +A N++  L   L +L  L  LNVS N+L  L   +G+L  L+ LD+ FN ++
Sbjct: 164 ADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLL 223

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++PDE+G    L       N L  LP++L     L     + N +  LP D      +++
Sbjct: 224 RLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAE 283

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    +A+ T L  L  + NLL  +P  +G+L RL  L L  N +  +P+
Sbjct: 284 LSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPT 343

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            + G   LAE  + +NAL  LPAELG++ KL  LD+ +NQL        QL +L +LD  
Sbjct: 344 ELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAG 403

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N +S LPPE+  +++L +L L+GN +                    S LPE+       
Sbjct: 404 MNLISDLPPELYAVSSLARLSLSGNRI--------------------SDLPED------- 436

Query: 344 TKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                        +T  E  L G N LS +P+ + +   +T L LS N +  LPP +   
Sbjct: 437 ----------FCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDL 486

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
             L+ L ++ N + + P  +   L++L  L L +N L  +P +       L  L+ S+N 
Sbjct: 487 TWLKELYVAANGLTELPTEV-GRLTTLEILDLTSNHLTALPEE-LGCCVRLTELEASHNR 544

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           +AS+P +    +L  L E+ L   +L   P ++ RL  LR L L    LQ +P     L 
Sbjct: 545 LASVPAS--LGNLVSLVEIDLSANELTTLPPELARLTALRHLKLCHCRLQRLPRELAALV 602

Query: 522 SLTELDLSDNNISA 535
              +L  + N+  A
Sbjct: 603 PPPDLRFTTNSNDA 616



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 201/437 (45%), Gaps = 17/437 (3%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L   + + N+   LP ++ +   L       N +T LP ++     ++KL+V  N L  
Sbjct: 49  SLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNALVA 108

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   +  +  +L EL    N L  +P  +G    L RL  + N++  +P  +  C  L E
Sbjct: 109 LPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCADLVE 168

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             +  N L+ALPA L  LS L  L++ SN+L     +   L  L  LDL  N L  LP E
Sbjct: 169 LDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLLRLPDE 228

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM-A 352
           +G++  L  LLL  N L +L ++L    T  LL    +RL        +      +++ A
Sbjct: 229 LGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAELSLRA 288

Query: 353 TRLSVTSKE-----LSLEGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            RL+    E      +L+ ++L+      +P  +     +T L L  N +  LP EL   
Sbjct: 289 NRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGL 348

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
           + L  L L  N +++ P A L  +  L+ L + NN L  +P      +  L++LD   N 
Sbjct: 349 SQLAELELQDNALEELP-AELGQMEKLAHLDVRNNQLTALPPS-IGQLVKLRLLDAGMNL 406

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           I+ LP  P   ++  L  L L   ++ + P D  RL +L  L L  N L ++P G   LT
Sbjct: 407 ISDLP--PELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLT 464

Query: 522 SLTELDLSDNNISALPP 538
            LT L LS N ++ LPP
Sbjct: 465 HLTVLSLSGNRLTTLPP 481



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 178/433 (41%), Gaps = 94/433 (21%)

Query: 164 KLDVEGNKLTVLSNNLIASWTM-----LTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           KLD+   +LT   N  IA   +     LT L A+ N  + +P  I  L++L RL L +N 
Sbjct: 26  KLDISSRQLT---NAQIAHLKLSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNN 82

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR- 276
           +  +P  I    +L +  +GNNAL ALP  + + +  L  L    NQL+    E    R 
Sbjct: 83  LTMLPVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARS 142

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L    N L  LP E+G    L +L +  N L  L         PA+L +L S     
Sbjct: 143 LKRLVAYVNQLQRLPEELGLCADLVELDVATNHLTAL---------PAMLAHLSS----- 188

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                            RL+V+S  L   G  L  +P       ++ +LDL  N +  LP
Sbjct: 189 ---------------LRRLNVSSNRLVHLGPQLGDLP-------DLERLDLRFNRLLRLP 226

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN-------------------- 436
            EL   A L +L+L  N +   P A+ T  +       +N                    
Sbjct: 227 DELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAELSL 286

Query: 437 --NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 493
             N L  +P +    +  LQ LDL++N+  LP  PP   +LP L  L+L    L   PT+
Sbjct: 287 RANRLTALPPEPLAALTALQTLDLAHNL--LPFLPPALGTLPRLTNLFLGANLLTLLPTE 344

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP--------------- 538
           +  L QL  L+L  N+L+ +P     +  L  LD+ +N ++ALPP               
Sbjct: 345 LCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGM 404

Query: 539 --------ELVSV 543
                   EL +V
Sbjct: 405 NLISDLPPELYAV 417



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 7/260 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L    N I  L  +L  +  L  L++S N++S+LP     L  L+ L + +N + 
Sbjct: 395 VKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLS 454

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  +   T L     S N+L  LP  +     L +   + N +T LP ++   + +  
Sbjct: 455 TLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEI 514

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N LT L   L      LTEL AS N L  +P ++G+L  L+ +DL  N + ++P 
Sbjct: 515 LDLTSNHLTALPEEL-GCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPP 573

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV-----EACQLRLSV 279
            ++   +L    + +  L  LP EL  L     L   +N    Y        A   RLS 
Sbjct: 574 ELARLTALRHLKLCHCRLQRLPRELAALVPPPDLRFTTNSNDAYACTNGDRTAYPGRLSW 633

Query: 280 LDLSNN-SLSGLPPEIGKMT 298
           L    N  L+ LP  +  +T
Sbjct: 634 LSTEGNPELADLPEALASIT 653


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 242/516 (46%), Gaps = 50/516 (9%)

Query: 42  WEAVDL---QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           WE  +L   Q+L LA N +  + E+++ L  L  L++  N+L  LP  IG+L  L  L +
Sbjct: 66  WEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSL 125

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EI     L   + S ++L  LP  +G   NL     S N ++  PE++  
Sbjct: 126 SKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGK 185

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N++ V+S   +     L  L   +N L  +P+ IG L  L  L+L  N+
Sbjct: 186 LQNLKDLDLSNNRIQVVSEK-VGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNK 244

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + +IP  I    SL E  + +N L  LP ELG ++ L +L L+ N++     E   L+ L
Sbjct: 245 LANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNL 304

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------------VNGPTPAL 325
             LDLS N    LP EIG++  L+ L L+ N   TL S +             N   P  
Sbjct: 305 RSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGE 364

Query: 326 LKYLRSRLPENEDSEASTTKEDLI----TMATRLSVTSKELSLEGMNLSA---IPSEIWE 378
              +++ LP  E   +   K+D I     +A+   +    LSLE     +    P +I E
Sbjct: 365 KDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILE 424

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  L L    ++ +P E+    +L+TL L  N++K  P  I   L +L  L L+ N 
Sbjct: 425 FRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEI-GQLKNLRGLSLEANE 483

Query: 439 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           L+ +P    K+I  LQ                     +L+ L L + + +  P +I +L+
Sbjct: 484 LKTLP----KEIEQLQ---------------------NLRGLNLHQNRFKIFPKEIGQLR 518

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           +L+ LDLS N L ++P     L +L EL+LSDN +S
Sbjct: 519 KLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLS 554



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 24/206 (11%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL+L    LS IP EI    ++  LDL  N ++ LPPE+    +L  L LS+N++   P
Sbjct: 75  QELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATLP 134

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE----------- 467
            A +  L +L  L L  + L  +P  G  ++  L+IL++SYN ++  PE           
Sbjct: 135 -AEIKLLQNLQYLNLSKDRLTILPK-GIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDL 192

Query: 468 ----------NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
                     +     L +L+ L L   +L   P +I +LQ L+ L+L  N L +IP+  
Sbjct: 193 DLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEI 252

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L SL ELDLSDN +  LP EL ++
Sbjct: 253 GELRSLKELDLSDNELKVLPKELGTI 278


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 220/452 (48%), Gaps = 58/452 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++L +  LR++P  VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 VDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITSVEKDIKNLSNLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T + K D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L       N ++++P  LA CSK+ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YLR                DL     RL +T+ +       
Sbjct: 459 KLESL---------PNEIAYLR----------------DL----QRLILTNNQ------- 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS +P  I     +T L L  N + +LP E+ +  +L+ L L+ N   +     L   S 
Sbjct: 483 LSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSK 542

Query: 429 LSCLKLDNNPLRQVPSDGFKDIP--MLQILDL 458
           LS + ++N PL  +P+      P  ++Q L +
Sbjct: 543 LSIMSIENCPLSTLPAQIVAGGPSFIIQFLKM 574



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 229/496 (46%), Gaps = 64/496 (12%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L LA  +I  L   ++ L  LT L +  NKL  LPA +G L  L++L +S NS+  +PD
Sbjct: 104 RLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            +G+   L   D   N+L+E+P  + R  +L+      N ITS+ +D+ + S ++ L + 
Sbjct: 164 SLGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIR 223

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I     L  L  + N L  +P+ IG+ +++ +LDL  N +L +P +I  
Sbjct: 224 ENKIKQLPAE-IGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGN 282

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L    +  N LSA+P  L + SKL  L+L                       NN +S
Sbjct: 283 LSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLE----------------------NNIIS 320

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP                     L SSLVN  +  L +      P    S+ ST     
Sbjct: 321 TLP-------------------EGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTI---- 357

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQT 407
                        L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  
Sbjct: 358 -----------YALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE 406

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L+ N++   P+ + + L SL  L L NN LR +P  G  ++  L+ LDL  N + SLP
Sbjct: 407 LNLATNQLNKIPEDV-SGLVSLEVLILSNNLLRNLP-HGIGNLRKLRELDLEENKLESLP 464

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
               +  L  LQ L L   QL   P  I  L  L  L L +N L  +PE    L +L EL
Sbjct: 465 NEIAY--LRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEEL 522

Query: 527 DLSDN-NISALPPELV 541
            L+DN ++++LP EL 
Sbjct: 523 YLNDNPHLNSLPFELA 538



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 44/275 (16%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           C E   +RL   DL+  S+  LP  + ++T L +L L GN L++L         PA +  
Sbjct: 97  CREENSVRL---DLAKRSIHLLPSSVKELTQLTELYLYGNKLQSL---------PAEVGC 144

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                           V  + L+L   +L+++P  +    ++  +DL 
Sbjct: 145 L---------------------------VNLETLALSENSLTSLPDSLGNLKQLRMVDLR 177

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++E+PP +    SL TL L  N+I      I  +LS+L+ L +  N ++Q+P++   
Sbjct: 178 HNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDI-KNLSNLTMLSIRENKIKQLPAE-IG 235

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           ++  L  LD+++N +  LP+     +   + +L L+  +L + P  I  L  L+ L L  
Sbjct: 236 ELCNLITLDVAHNQLEHLPKE--IGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRY 293

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           N L +IP      + L EL+L +N IS LP  L+S
Sbjct: 294 NRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLS 328



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLNKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L  LP  IG L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G  +NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSTLPAQIVAG 563


>gi|440796624|gb|ELR17733.1| Fbox domain containing protein [Acanthamoeba castellanii str. Neff]
          Length = 1783

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 240/505 (47%), Gaps = 51/505 (10%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             +L  L L  N+++ L  ++ +L  LT L++S N+L ELP  +G+L  L  LD+S NS+ 
Sbjct: 1201 TNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQ 1260

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             +P+E+G  T L +     N+LK+ P  + + ++L       N IT LPE L+  + +  
Sbjct: 1261 SLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVL 1320

Query: 165  LDVEGNKLTVLSNNLIA-SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N++T  +    A + T L  L    N L  +P+ IG L++L  L+L +NR+ ++P
Sbjct: 1321 LDLNRNRITEAAALRPACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALP 1380

Query: 224  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ++    +L   Y   N L+++P ELG L+ L +LDL  N+L+         RL V  + 
Sbjct: 1381 PALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHNELRAVFDVRRLARLEVFSVY 1440

Query: 284  NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
             N LS +PP +G++T+L++L L  N   T        P P         + E     A+T
Sbjct: 1441 KNCLSRVPPGLGQLTSLKRLWLGINAFHT------EPPPP---------MSELSTVAAAT 1485

Query: 344  TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            T E +                          E+ E   +  L++  N I  +P  LS   
Sbjct: 1486 TTESI-------------------------DEVAELRSLRVLNMRGNDIHSVPEALSRLT 1520

Query: 404  SLQTLILSRNKI---KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
            +L  L L RNK+   +  P ++  SL+ L  L L  N L++   +    +  L+ L L  
Sbjct: 1521 NLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEK 1580

Query: 461  N-IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSI---PE 515
            N I+SLP +   S L  L  L +   +   A P  +L +  L  LD++ N    +    +
Sbjct: 1581 NGISSLPAS--LSRLTRLGHLNISANRFEGALPPIVLAITSLTTLDIACNRFTRLCDDDQ 1638

Query: 516  GFKNLTSLTELDLSDNNISALPPEL 540
             F  LT L  L+  +N + ALP EL
Sbjct: 1639 AFGRLTKLRVLNAGNNRLEALPDEL 1663



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 232/519 (44%), Gaps = 45/519 (8%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             +L +L L HN +  L   +  L  L  LN+  NKL  LP  +G+L  L SL +S+N + 
Sbjct: 1033 TNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLT 1092

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSS-LGRCLNLSD-FKASNNCITSLPED----LAD 158
             +PD +   TAL     ++NQL+ LP +      NL + +   N  + SL  +    +A 
Sbjct: 1093 SLPDTMSRLTALTGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAG 1152

Query: 159  CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             + +SKL+V    L  L ++L     +    +    L    P     L+ L  L L+ N 
Sbjct: 1153 LTALSKLNVHSCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNS 1212

Query: 219  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
            +  +P  I    SL E +M  N L  LP ELGKL+ L  LDL  N L+    E  +L  L
Sbjct: 1213 LKVLPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQSLPEELGELTNL 1272

Query: 278  SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
              + L  N L   P  + K+ +L +L L  N +  L  SL       LL   R+R+    
Sbjct: 1273 RQILLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVLLDLNRNRI---- 1328

Query: 338  DSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELP 396
             +EA+  +          ++TS +    GMN L+A+P EI    ++  L+L  N +  LP
Sbjct: 1329 -TEAAALR-------PACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALP 1380

Query: 397  PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            P L    +L+ +    N++   PD  L  L++L  L L +N LR V     + +  L++ 
Sbjct: 1381 PALGQLTALKYVYACYNRLTSVPDE-LGGLTNLQSLDLSHNELRAVFD--VRRLARLEVF 1437

Query: 457  DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP-------------------TDILR 496
             +  N ++ +P  P    L  L+ L+L        P                    ++  
Sbjct: 1438 SVYKNCLSRVP--PGLGQLTSLKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAE 1495

Query: 497  LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L+ LR+L++  N + S+PE    LT+L  L L  N ++ 
Sbjct: 1496 LRSLRVLNMRGNDIHSVPEALSRLTNLDVLSLWRNKLTG 1534



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 221/479 (46%), Gaps = 61/479 (12%)

Query: 78   NKLSEL-PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
            NKL+E+ P    +L  L SL +  NS+  +P EI    +L +   S NQL+ELP  LG+ 
Sbjct: 1187 NKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGKL 1246

Query: 137  LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             NL+    S N + SLPE+L + + + ++ +  N+L       +     L  L    N +
Sbjct: 1247 TNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFPL-FVTKLVSLERLDLDTNAI 1305

Query: 197  NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC--SLAEFYMGNNALSALPAELGKLSK 254
              +PE++  L+ L+ LDL++NRI    +    C   SL   ++G N L+ALP E+G+L++
Sbjct: 1306 THLPESLSQLTNLVLLDLNRNRITEAAALRPACALTSLQALFVGMNGLTALPDEIGRLTQ 1365

Query: 255  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L +L+L  N+L        QL  L  +    N L+ +P E+G +T L+ L L+ N LR +
Sbjct: 1366 LESLNLIENRLTALPPALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHNELRAV 1425

Query: 314  RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                                             D+  +A RL V     S+    LS +P
Sbjct: 1426 F--------------------------------DVRRLA-RLEV----FSVYKNCLSRVP 1448

Query: 374  SEIWEAGEITKLDLSRNSIQELPP----ELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
              + +   + +L L  N+    PP    ELS+ A+  T       I +     +  L SL
Sbjct: 1449 PGLGQLTSLKRLWLGINAFHTEPPPPMSELSTVAAATTT----ESIDE-----VAELRSL 1499

Query: 430  SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP---FSSLPHLQELYLRRMQ 486
              L +  N +  VP +    +  L +L L  N  + P   P   + SL  L+ L+L    
Sbjct: 1500 RVLNMRGNDIHSVP-EALSRLTNLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENN 1558

Query: 487  LREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI-SALPPELVSV 543
            L+E  P +I  L  LR L L +N + S+P     LT L  L++S N    ALPP ++++
Sbjct: 1559 LQEELPEEIGALTNLRALHLEKNGISSLPASLSRLTRLGHLNISANRFEGALPPIVLAI 1617



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 168/406 (41%), Gaps = 85/406 (20%)

Query: 140  SDFKASNNCITSLPEDLADCSK--MSKLDVEGNKLTVLSNN-----LIASWT-MLTELIA 191
            SD +  +N  TS  E++ D  K   + +D E N+L  L  N     L   WT  +T L  
Sbjct: 958  SDGEEQSNEPTSGEEEVPDHVKGLTTTVDPEDNELAALGLNRPTRRLYRHWTRTMTYLWM 1017

Query: 192  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            ++N L  +P  +   + LI LDL  NR+ S+P +IS   +L    +  N L +LP ELG+
Sbjct: 1018 NENSLTALPPPVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQ 1077

Query: 252  LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L+ L                      + L LS N L+ LP  + ++T L  + L  N LR
Sbjct: 1078 LTNL----------------------TSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLR 1115

Query: 312  TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            +L                    P+   + A   +E        L   +  +      L+A
Sbjct: 1116 SL--------------------PDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTA 1155

Query: 372  IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +          +KL++    +  LP  L+    L  L L  NK+ +    +   L++L+ 
Sbjct: 1156 L----------SKLNVHSCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLNS 1205

Query: 432  LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L L  N L+ +P                         P    L  L EL++   QLRE P
Sbjct: 1206 LWLYTNSLKVLP-------------------------PEIEHLQSLTELHMSVNQLRELP 1240

Query: 492  TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             ++ +L  L  LDLS+NSLQS+PE    LT+L ++ L  N +   P
Sbjct: 1241 KELGKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFP 1286



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 157/325 (48%), Gaps = 27/325 (8%)

Query: 231  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            ++   +M  N+L+ALP  +   + L  LDL  N+L        +L+ L  L+L  N L  
Sbjct: 1011 TMTYLWMNENSLTALPPPVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLES 1070

Query: 290  LPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALL--KYLRSRLPENEDSEASTTK 345
            LP E+G++T L  L L+ N L +L  ++  +   T   L    LRS LP+   + A   +
Sbjct: 1071 LPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLRS-LPDTWFANARNLR 1129

Query: 346  E--------------DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            E              ++      L+  SK L++    L  +P  +    ++T L+L  N 
Sbjct: 1130 ELYFWRNPMLGSLAPNVDAGMAGLTALSK-LNVHSCGLGTLPHSLTLLTDLTYLELGGNK 1188

Query: 392  IQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            + E+ P L     +L +L L  N +K  P  I   L SL+ L +  N LR++P +    +
Sbjct: 1189 LAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEI-EHLQSLTELHMSVNQLRELPKE-LGKL 1246

Query: 451  PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              L  LDLS N + SLPE      L +L+++ L R +L++ P  + +L  L  LDL  N+
Sbjct: 1247 TNLTHLDLSRNSLQSLPEE--LGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNA 1304

Query: 510  LQSIPEGFKNLTSLTELDLSDNNIS 534
            +  +PE    LT+L  LDL+ N I+
Sbjct: 1305 ITHLPESLSQLTNLVLLDLNRNRIT 1329



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 52/231 (22%)

Query: 361  ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            EL L+   L+++P  I     +  L+L  N ++ LP EL    +L +L LS N++   PD
Sbjct: 1037 ELDLKHNRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLTSLPD 1096

Query: 421  AILTSLSSLSCLKLDNNPLRQVPSDGFKDI-----------PMLQILD------------ 457
              ++ L++L+ + L+ N LR +P   F +            PML  L             
Sbjct: 1097 T-MSRLTALTGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTA 1155

Query: 458  ------LSYNIASLPENPP----------------------FSSLPHLQELYLRRMQLRE 489
                   S  + +LP +                        F  L +L  L+L    L+ 
Sbjct: 1156 LSKLNVHSCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNSLKV 1215

Query: 490  APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I  LQ L  L +S N L+ +P+    LT+LT LDLS N++ +LP EL
Sbjct: 1216 LPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQSLPEEL 1266


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 215/436 (49%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LSSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 215/451 (47%), Gaps = 48/451 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++   + L  L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P G  +LT+LT L L +N ++ LP E+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 192/400 (48%), Gaps = 42/400 (10%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S   I  LP  + + +++++L +  NKL  L    +     L  L  S+N L  +P+++ 
Sbjct: 108 SKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAE-VGCLVNLVTLALSENSLTSLPDSLD 166

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L +L  LDL  N++  IPS +    SLA  Y+  N ++ +  ++  LSKL  L +  N+
Sbjct: 167 NLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENK 226

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +K+   E  +L  L  LD+++N L  LP EIG  T +  L L  N L  L  ++ N    
Sbjct: 227 IKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGN---- 282

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          LS  S+ L L    LSAIP  + +  E+ 
Sbjct: 283 -------------------------------LSSLSR-LGLRYNRLSAIPKSLAKCSELD 310

Query: 384 KLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +L+L  N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++
Sbjct: 311 ELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKI 370

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P   F    +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L 
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLE 428

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 429 VLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 44/275 (16%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           C E   +RL   DLS  S+  LP  I ++T L +L L  N L+ L         PA +  
Sbjct: 97  CREENSMRL---DLSKRSIHLLPSAIKELTQLTELYLYSNKLQCL---------PAEVGC 144

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                 +L+T+A           L   +L+++P  +    ++  LDL 
Sbjct: 145 LV----------------NLVTLA-----------LSENSLTSLPDSLDNLKKLRMLDLR 177

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++E+P  +   +SL TL L  N+I      I  +LS L+ L +  N ++Q+P++   
Sbjct: 178 HNKLREIPSVVYRLSSLATLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQLPAE-IG 235

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           ++  L  LD+++N +  LPE     S   +  L L+  +L + P  I  L  L  L L  
Sbjct: 236 ELCNLITLDVAHNQLEHLPEE--IGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           N L +IP+     + L EL+L +NNIS LP  L+S
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISTLPEGLLS 328



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563


>gi|357618946|gb|EHJ71730.1| putative mitotic protein phosphatase 1 regulator [Danaus plexippus]
          Length = 601

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 267/569 (46%), Gaps = 70/569 (12%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEG-----------DKWWEAVDLQKLIL 52
           ++K+A+ +G L+L NR L  VP  V+K  D   +            D WW A  L+ L L
Sbjct: 35  LIKSAKRTGQLSLCNRGLGTVPENVWKVNDLVMDDTKDVDFSRSPRDNWWNAEPLKMLDL 94

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N I+ +  +++ L  L  L +  N +  +P  IGEL+ L +L +  N +  +P E   
Sbjct: 95  SSNVIKIISPNIKLLSELITLKLHDNAIESIPPEIGELNNLSNLSLDHNRLECLPKEFYK 154

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T +     S N +K +    G  + L+    S+N +TSLP  +    ++  L++  N+L
Sbjct: 155 LTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNEL 214

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  + I +   L +   S N L  +P  +G L ++  LD + N I  +P    GC +L
Sbjct: 215 TELPPD-IVNLRDLKKFNVSNNDLKKLP-ALGELRKMETLDANHNAIEELPD-FYGCVAL 271

Query: 233 AEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG 289
            E Y+ NN +  +  E   ++  L  L++  N+L E   E   L   L   DLSNN+L+ 
Sbjct: 272 KEIYIANNFIKEITEEFCDQMQHLNVLNIRDNKL-EVLPENISLLQNLKRFDLSNNNLNK 330

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +G ++ L+ + + GN L  +R  ++ G T  ++KYLR R+ E    EA   + +  
Sbjct: 331 LPKNLGLLSQLQSISMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENNWP 390

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRN---------------- 390
              T     S+ L +    L+++P +++ A    E+  +DLSRN                
Sbjct: 391 DKYTL--KKSQALIVPAKELASVPEDVFVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTL 448

Query: 391 --------SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
                   SI+ +PPE+S+C  LQ + L +N + D P   ++ L +L  L + NN   ++
Sbjct: 449 TQLLLSSNSIEVVPPEISACKHLQYIDLGKNCLTDLP-MEMSDLKNLRELVISNNRFTKI 507

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           P   + D+  L+IL  + N  +                     ++  +   + +L++L +
Sbjct: 508 PRCVY-DLENLEILLAAENQIT---------------------EINVSSDALAKLKKLAV 545

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           LDL+ NS+ ++P    N T L  L+L  N
Sbjct: 546 LDLTNNSIITVPPELGNFTHLRSLELMGN 574



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 50/376 (13%)

Query: 9   RTSGSLNLSNRSLRDVP--NEVYK------NFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           R     N+SN  L+ +P   E+ K      N +   E   ++  V L+++ +A+N I+++
Sbjct: 225 RDLKKFNVSNNDLKKLPALGELRKMETLDANHNAIEELPDFYGCVALKEIYIANNFIKEI 284

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
            E+    +  L VLN+  NKL  LP  I  L  LK  D+S N++ K+P  +G  + L   
Sbjct: 285 TEEFCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNNLNKLPKNLGLLSQLQSI 344

Query: 120 DCSSNQLKELPSSLGRC----------------------LNLSDF------KASNNCIT- 150
               N+L  +   + R                       LN +++      K S   I  
Sbjct: 345 SMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENNWPDKYTLKKSQALIVP 404

Query: 151 -----SLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
                S+PED+   A  +++  +D+  NKLT L          LT+L+ S N +  +P  
Sbjct: 405 AKELASVPEDVFVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTLTQLLLSSNSIEVVPPE 464

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I +   L  +DL +N +  +P  +S   +L E  + NN  + +P  +  L  L  L    
Sbjct: 465 ISACKHLQYIDLGKNCLTDLPMEMSDLKNLRELVISNNRFTKIPRCVYDLENLEILLAAE 524

Query: 263 NQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           NQ+ E  V +  L    +L+VLDL+NNS+  +PPE+G  T LR L L GN  R  R +++
Sbjct: 525 NQITEINVSSDALAKLKKLAVLDLTNNSIITVPPELGNFTHLRSLELMGNCFRQPRHAVL 584

Query: 319 NGPTPALLKYLRSRLP 334
              T ++L YLR R+P
Sbjct: 585 TKGTASILSYLRDRIP 600



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 198/444 (44%), Gaps = 68/444 (15%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++  +++ L +++N+I+ ++ D  +L +LT L++SHNKL+ LP  +G L  L  L++S
Sbjct: 151 EFYKLTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLS 210

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           +N + ++P +I +   L KF+ S+N LK+LP+ LG    +    A++N I  LP D   C
Sbjct: 211 YNELTELPPDIVNLRDLKKFNVSNNDLKKLPA-LGELRKMETLDANHNAIEELP-DFYGC 268

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI---------------- 203
             + ++ +  N +  ++         L  L    N L  +PE I                
Sbjct: 269 VALKEIYIANNFIKEITEEFCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNNL 328

Query: 204 -------GSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAEL------ 249
                  G LS+L  + +  N++  +    I G       Y+ +     +  E       
Sbjct: 329 NKLPKNLGLLSQLQSISMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENN 388

Query: 250 ----GKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TL 300
                 L K   L + + +L    ++  V A Q  + V+DLS N L+GLP     +  TL
Sbjct: 389 WPDKYTLKKSQALIVPAKELASVPEDVFVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTL 448

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLR---------SRLPENEDSEASTTKEDLITM 351
            +LLL+ N +  +       P  +  K+L+         + LP  E S+    +E +I+ 
Sbjct: 449 TQLLLSSNSIEVV------PPEISACKHLQYIDLGKNCLTDLPM-EMSDLKNLRELVISN 501

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAG----------EITKLDLSRNSIQELPPELS 400
                +      LE +  L A  ++I E            ++  LDL+ NSI  +PPEL 
Sbjct: 502 NRFTKIPRCVYDLENLEILLAAENQITEINVSSDALAKLKKLAVLDLTNNSIITVPPELG 561

Query: 401 SCASLQTLILSRNKIKDWPDAILT 424
           +   L++L L  N  +    A+LT
Sbjct: 562 NFTHLRSLELMGNCFRQPRHAVLT 585



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 43/280 (15%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN +K        L  L  L L +N++  +PPEIG++  L  L L  N L  L
Sbjct: 89  LKMLDLSSNVIKIISPNIKLLSELITLKLHDNAIESIPPEIGELNNLSNLSLDHNRLECL 148

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                             +L E                        + LS+   ++  I 
Sbjct: 149 PKEFY-------------KLTE-----------------------MRWLSISYNSIKNIE 172

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            +  +   +T LDLS N +  LPP +     L  L LS N++ + P  I+ +L  L    
Sbjct: 173 PDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNELTELPPDIV-NLRDLKKFN 231

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + NN L+++P+ G  ++  ++ LD ++N  ++ E P F     L+E+Y+    ++E   +
Sbjct: 232 VSNNDLKKLPALG--ELRKMETLDANHN--AIEELPDFYGCVALKEIYIANNFIKEITEE 287

Query: 494 IL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
              ++Q L +L++  N L+ +PE    L +L   DLS+NN
Sbjct: 288 FCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNN 327



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W A  +  LDLS N I+ + P +   + L TL L  N I+  P  I   L++LS L LD+
Sbjct: 84  WNAEPLKMLDLSSNVIKIISPNIKLLSELITLKLHDNAIESIPPEI-GELNNLSNLSLDH 142

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P + +K +  ++ L +SYN                         ++    D   
Sbjct: 143 NRLECLPKEFYK-LTEMRWLSISYN------------------------SIKNIEPDFGD 177

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LDLS N L S+P G   L  L +L+LS N ++ LPP++V++
Sbjct: 178 LVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNELTELPPDIVNL 224


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 153/479 (31%), Positives = 228/479 (47%), Gaps = 52/479 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++++ L L+  N   L +++  L  L  L +  N+L+  PA I EL  L+SLD+S N ++
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG    L +     N+L   P  +G+  NL      +N + +LP ++     + K
Sbjct: 108 MLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LTVL    I     L  L    N L  +P  IG L  L  L L +N++ + P 
Sbjct: 168 LNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------HSNQLKEYCVEACQL 275
            I    +L E  +  N L  LP E+G+L KL  L+L           NQL     E  QL
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           + L +L LS N L+ LP EIG++  L+ L L GN L TL         P  +  L++   
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL---------PREINKLKN--- 334

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    KEL L G  L+ +P EIWE   +T L L  N I  
Sbjct: 335 ------------------------LKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQ L L  N++   P  I   L  L  L L+NN ++ +P++    +  L 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEI-GELKLLEELNLENNRIKILPNE-IGALENLW 428

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           I +LS N +AS+P+     +L +L+ LYL   QL+  P  + +LQ L +L+L  N L S
Sbjct: 429 IFNLSGNKLASIPKE--IGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 270/623 (43%), Gaps = 106/623 (17%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL--SNNL- 179
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L   N L 
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLT 277

Query: 180 -----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I     L  L  S N L  +P  IG L  L  LDL  N++ ++P  I+   +L E
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEACQLR---------- 276
            Y+  N L+ +P E+ +L  L  L L +N++        K   ++   LR          
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE 397

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                        L + +LS N L+ +P EIG +  LR L L  
Sbjct: 398 IGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLEN 457

Query: 308 NPLRTLRSS------------LVNGPTPALLKYLRSRLP----ENEDSEASTTKEDL-IT 350
           N L+TL               L+N       K +++ LP    +  D E   T  +L + 
Sbjct: 458 NQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLA 517

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L + S  LSLE    S  P EI     +  L L   S+  LP E+     L+ L L
Sbjct: 518 LEQPLKILS--LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 411 SRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
             N++K  P  I  L +L SL      NN    +P    K+I  LQ      N+ SL  N
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP----KEIARLQ------NLRSLLLN 623

Query: 469 P-PFSSLP----HLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
              F   P     L++L +  +   QL   P  I RL+ L++LDLS N L ++P     L
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +LTEL L  N I  LP E+  +
Sbjct: 684 HNLTELYLQYNRIKTLPEEIARL 706



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 213/471 (45%), Gaps = 57/471 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S    + LP  I +L  L+ L +  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         PA +  L++                       L +    LSL    L+
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKN-----------------------LQI----LSLSYNRLA 300

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI +   +  LDL  N +  LP E++   +L+ L L+ NK+   P  I   L +L+
Sbjct: 301 TLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEI-WELENLT 359

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L+L NN +  +P +  K    LQ L+L  N + +LP       L     L   R+++  
Sbjct: 360 ILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKI-- 416

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 417 LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 232/543 (42%), Gaps = 92/543 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 246

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 247 LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 306

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 307 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 365

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-----------------------LS 253
           NRI ++P  I    +L E  +  N L  LP E+G+                       L 
Sbjct: 366 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L   +L  N+L     E   L+ L +L L NN L  LP ++ K+  L  L L  NPL +
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLSVTS------------ 359
                +    P     LR       D E   T  +L + +   L + S            
Sbjct: 486 KERKKIQALLPNCNIDLR-------DVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFP 538

Query: 360 ---------KELSLEGMNLSAIPSEIWEAGEITKLDL----------------------- 387
                    + LSL   +L A+P EI     + +L L                       
Sbjct: 539 KEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDI 598

Query: 388 -SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N  + LP E++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P + 
Sbjct: 599 GANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EK 656

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ+LDLS+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L
Sbjct: 657 IGRLKGLQMLDLSHNRLTTLPSE--IGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTL 714

Query: 506 SQN 508
            +N
Sbjct: 715 YEN 717



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 185/423 (43%), Gaps = 37/423 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGETYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+ L L  
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYE 716

Query: 413 NKI 415
           N I
Sbjct: 717 NPI 719


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 231/499 (46%), Gaps = 23/499 (4%)

Query: 43  EAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           + VD L  L L++  +  + E++ ++  L  L VS+N+L+ +P AIG L  L  LD   N
Sbjct: 10  QTVDGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGN 69

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  IGS   L      SN+L  LP  + +   L+     +N +T +P  +     
Sbjct: 70  MLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPN 129

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LDV        SNN ++++    E +    +L      +  L +L  L ++ N++  
Sbjct: 130 LEVLDV--------SNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTE 181

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +PS +    +L    + NN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 182 VPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVL 241

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            + NN LS  PP + K+  LR+L + G      + S        L K    R+  N+ +E
Sbjct: 242 SVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAE 301

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                  L  +          L +    LS  P  + +  ++ +L ++ N + E+P  + 
Sbjct: 302 VPRGVCSLPNLEV--------LDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVC 353

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
           S  +L+ L +  NK+  +P  +   L  L  L +  N L +VP  G   +P L++L +  
Sbjct: 354 SLPNLEELSVYNNKLSTFPPGV-EKLQKLRQLYIYGNQLTEVPP-GVCSLPNLEVLSVYN 411

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           N +++ P  P    L  L+ELY+   QL E P+ +  L  L ++ ++ N L + P G + 
Sbjct: 412 NKLSTFP--PGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVER 469

Query: 520 LTSLTELDLSDNNISALPP 538
           L  L EL +  N ++ +PP
Sbjct: 470 LQKLRELHVHGNQLTEIPP 488



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 247/566 (43%), Gaps = 106/566 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L+ 
Sbjct: 17  TLDLSNQGLTSIPEEVF-------------DITDLEFLGVSNNRLTSIPEAIGRLQKLSR 63

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N L+ LP AIG L  L  L V  N +  +P  I     L       N+L E+P  
Sbjct: 64  LDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPG 123

Query: 133 LGRCLNLSDFKASNNCITSLP----------------EDLADCSKMSKLDVEGNKLTVLS 176
           +    NL     SNN +++ P                  L +  K+ +L + GN+LT + 
Sbjct: 124 VFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVP 183

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS----- 231
           +  + S   L  L  S N L+  P  +  L +L  L ++ N++  +P   SG CS     
Sbjct: 184 SG-VCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVP---SGVCSLPNLE 239

Query: 232 --------LAEFYMG------------------NNALSALPAELGKLSKLGTLDLHSNQL 265
                   L+ F  G                  NN LS  P  + KL KL  L ++ NQL
Sbjct: 240 VLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQL 299

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            E     C L  L VLD+SN+ LS  PP + K+  LR+L + GN L  + S + + P   
Sbjct: 300 AEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLP--- 356

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                              +ELS+    LS  P  + +  ++ +
Sbjct: 357 ---------------------------------NLEELSVYNNKLSTFPPGVEKLQKLRQ 383

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L +  N + E+PP + S  +L+ L +  NK+  +P  +   L  L  L + +N L +VPS
Sbjct: 384 LYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGV-EKLQKLRELYIYDNQLTEVPS 442

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
            G   +P L+++ ++ N +++ P  P    L  L+EL++   QL E P  +  L  L +L
Sbjct: 443 -GVCSLPNLEVVYVNNNKLSTFP--PGVERLQKLRELHVHGNQLTEIPPVVCYLTNLEVL 499

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLS 529
            +S N ++ +P+G + LT L  L +S
Sbjct: 500 IISDNPIRHLPDGVRRLTRLKTLYVS 525



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 206/450 (45%), Gaps = 31/450 (6%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D S+  L  +P  +    +L     SNN +TS+PE +    K+S+LD  GN 
Sbjct: 11  TVDGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I S   LT L    N L  +P  I  L +L  L +  NR+  +P  +    +
Sbjct: 71  LTRLPQ-AIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPN 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------KEYCVEACQL---------- 275
           L    + NN LS  P  + KL KL  L ++ NQL      +E  +   QL          
Sbjct: 130 LEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSL 189

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L VL +SNN LS  PP + K+  LR+L + GN L  + S + + P   +L    ++L 
Sbjct: 190 PNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKL- 248

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                  ST    +  +     +    +      LS  P  + +  ++ +L +  N + E
Sbjct: 249 -------STFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAE 301

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +P  + S  +L+ L +S +K+  +P  +   L  L  L ++ N L +VPS G   +P L+
Sbjct: 302 VPRGVCSLPNLEVLDVSNSKLSTFPPGV-EKLQKLRQLHINGNQLTEVPS-GVCSLPNLE 359

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L +  N +++ P  P    L  L++LY+   QL E P  +  L  L +L +  N L + 
Sbjct: 360 ELSVYNNKLSTFP--PGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTF 417

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P G + L  L EL + DN ++ +P  + S+
Sbjct: 418 PPGVEKLQKLRELYIYDNQLTEVPSGVCSL 447



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 240/543 (44%), Gaps = 66/543 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE---DLRNLPLL 70
           L++SN  L   P  V K       G    +  +LQKL   H N  +L E    + +LP L
Sbjct: 133 LDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSLPNL 192

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            VL+VS+NKLS  P  + +L  L+ L ++ N + ++P  + S   L      +N+L   P
Sbjct: 193 EVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKLSTFP 252

Query: 131 SSLG-----RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             +      R L++   K  NN +++ P  +    K+ +L + GN+L  +    + S   
Sbjct: 253 PGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRG-VCSLPN 311

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L  S + L+  P  +  L +L +L ++ N++  +PS +    +L E  + NN LS  
Sbjct: 312 LEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTF 371

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  + KL KL  L ++ NQL E     C L  L VL + NN LS  PP + K+  LR+L 
Sbjct: 372 PPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELY 431

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           +  N L  + S + +             LP  E    +  K                   
Sbjct: 432 IYDNQLTEVPSGVCS-------------LPNLEVVYVNNNK------------------- 459

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-- 422
               LS  P  +    ++ +L +  N + E+PP +    +L+ LI+S N I+  PD +  
Sbjct: 460 ----LSTFPPGVERLQKLRELHVHGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPDGVRR 515

Query: 423 LTSLSSL---SCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           LT L +L    C         Q P      K +  L      +++  LP+     +L HL
Sbjct: 516 LTRLKTLYVSGC---------QFPGQVLQLKTLEKLHAGGCKFDM--LPDE--VGNLQHL 562

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L L    LR  P+ +  L  LR + L +N   + PE   +L ++ +L +S+NNI+ LP
Sbjct: 563 WFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLPAMEKLFISNNNITRLP 622

Query: 538 PEL 540
             L
Sbjct: 623 TAL 625



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 198/462 (42%), Gaps = 53/462 (11%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
           SG  +L N  +  V N     F    E  +    +D+  +   +N +      +  L  L
Sbjct: 230 SGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKL 289

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
             L +  N+L+E+P  +  L  L+ LDVS + +   P  +     L +   + NQL E+P
Sbjct: 290 RELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVP 349

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           S +    NL +    NN +++ P  +    K+ +L + GN+LT +    + S   L  L 
Sbjct: 350 SGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPG-VCSLPNLEVLS 408

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L+  P  +  L +L  L ++ N++  +PS +    +L   Y+ NN LS  P  + 
Sbjct: 409 VYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVE 468

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L KL  L +H NQL E     C L  L VL +S+N +  LP  + ++T L+ L ++G  
Sbjct: 469 RLQKLRELHVHGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQ 528

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
                        P  +  L+                           T ++L   G   
Sbjct: 529 F------------PGQVLQLK---------------------------TLEKLHAGGCKF 549

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P E+     +  L LS N ++ LP  +S   +L+ + L +NK   +P+ +L  L ++
Sbjct: 550 DMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTFPE-VLCDLPAM 608

Query: 430 SCLKLDNNPLRQVPS-----DGFKDIPMLQILDLSYNIASLP 466
             L + NN + ++P+     D  KD      LD+S N  + P
Sbjct: 609 EKLFISNNNITRLPTALHRADKLKD------LDVSGNPLTYP 644



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 28/327 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L + +N +      +  L  L  L +  N+L+E+P  +  L  L+ L V  N +  
Sbjct: 357 NLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLST 416

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL     +NN +++ P  +    K+ +L
Sbjct: 417 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLREL 476

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN+LT +   ++   T L  LI S N +  +P+ +  L+RL  L +        P  
Sbjct: 477 HVHGNQLTEIPP-VVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSG---CQFPGQ 532

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-------------QLKEYCVEA 272
           +    +L + + G      LP E+G L  L  L L SN              L+E  ++ 
Sbjct: 533 VLQLKTLEKLHAGGCKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDK 592

Query: 273 ----------CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
                     C L  +  L +SNN+++ LP  + +   L+ L ++GNPL      +    
Sbjct: 593 NKFDTFPEVLCDLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQG 652

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDL 348
           T A++ +L+    +         K+ L
Sbjct: 653 TAAIMAFLKQEAEKGTKRAGQEEKKGL 679


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 201/376 (53%), Gaps = 22/376 (5%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LNV+ N L+ LPA IG+L  L+ L ++ N +  +P +IG  T+L +     N+L  +P+ 
Sbjct: 33  LNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAE 92

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L +     N +TS+PE++   + ++ L +  N+LT L    I   T LTEL  +
Sbjct: 93  IGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAE-IGQLTALTELNLT 151

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P  IG L+ L++L+L +N++ ++P+      SL E Y+ +N L+++PA++G+L
Sbjct: 152 ENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQL 211

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L+ NQL     E  QL  L +L LS+N L+ +P EI ++ +L +L L+GN L 
Sbjct: 212 TSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLT 271

Query: 312 T--LRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           +  L    +   T   L Y + + LP              I   T L    ++L L    
Sbjct: 272 SVPLEIGQLTAMTELYLSYNQLTSLPAE------------IGQLTSL----EKLYLGDNR 315

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P+EI +   +  L L+ N +  +P E+    SL+   L RN++   P  +   L+S
Sbjct: 316 LTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEV-GQLTS 374

Query: 429 LSCLKLDNNPLRQVPS 444
           L   +L +N L  VP+
Sbjct: 375 LVEFRLRSNQLTSVPA 390



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 206/437 (47%), Gaps = 45/437 (10%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E G    L   DC       +P+ +GR   L +   + N +T LP ++   + + +L + 
Sbjct: 2   ENGRVVELALADCGLT--GAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLT 59

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           GN+LT                         +P  IG L+ L RL LH NR+ S+P+ I  
Sbjct: 60  GNQLT------------------------SVPADIGQLTSLERLWLHGNRLTSVPAEIGQ 95

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L E ++  N L+++P E+G+L+ L  L L SNQL     E  QL  L+ L+L+ N L
Sbjct: 96  FAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQL 155

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + +P EIG++T+L KL LT N L  +         PA    L S      D    T+   
Sbjct: 156 TNVPAEIGQLTSLVKLNLTKNQLTNV---------PAEFWRLTSLGELYLDDNRLTSVPA 206

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            I   T L+     L L G  L+++P+EI +   +  L LS N +  +P E+    SL+ 
Sbjct: 207 DIGQLTSLTW----LGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLER 262

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L LS N++   P  I   L++++ L L  N L  +P++    +  L+ L L  N + S+P
Sbjct: 263 LDLSGNQLTSVPLEI-GQLTAMTELYLSYNQLTSLPAE-IGQLTSLEKLYLGDNRLTSVP 320

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  L  L  LYL   QL   P +I +L  L I  L +N L S+P     LTSL E 
Sbjct: 321 AE--IGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTSLVEF 378

Query: 527 DLSDNNISALPPELVSV 543
            L  N ++++P  ++ +
Sbjct: 379 RLRSNQLTSVPAAILEL 395



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 185/388 (47%), Gaps = 43/388 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  D+  L  L  L +  N+L+ +PA IG+   L  L +  N +  +
Sbjct: 53  LRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSV 112

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG  T+L      SNQL  LP+ +G+   L++   + N +T++P ++   + + KL+
Sbjct: 113 PEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLVKLN 172

Query: 167 VEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +  N+LT   N     W  T L EL    N L  +P  IG L+ L  L L+ N++ S+P+
Sbjct: 173 LTKNQLT---NVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPA 229

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    SL    + +N L+++PAE+ +L  L  LDL  NQL    +E  QL  ++ L LS
Sbjct: 230 EIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLS 289

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP EIG++T+L KL L  N L ++         PA +  L S            
Sbjct: 290 YNQLTSLPAEIGQLTSLEKLYLGDNRLTSV---------PAEIGQLTSLWG--------- 331

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                             L L    L+++P+EI +   +    L RN +  LP E+    
Sbjct: 332 ------------------LYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLT 373

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSC 431
           SL    L  N++   P AIL  L +  C
Sbjct: 374 SLVEFRLRSNQLTSVPAAIL-ELEAAGC 400



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 14/252 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L +VP E+ +                L KL L  N +  +  +   L  L  L
Sbjct: 148 LNLTENQLTNVPAEIGQ-------------LTSLVKLNLTKNQLTNVPAEFWRLTSLGEL 194

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L  L +  N +  +P EIG  T+L     SSNQL  +P+ +
Sbjct: 195 YLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEI 254

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  +L     S N +TS+P ++   + M++L +  N+LT L    I   T L +L    
Sbjct: 255 RQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAE-IGQLTSLEKLYLGD 313

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L+ N++ S+P+ I    SL  F +  N L++LP E+G+L+
Sbjct: 314 NRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLT 373

Query: 254 KLGTLDLHSNQL 265
            L    L SNQL
Sbjct: 374 SLVEFRLRSNQL 385



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 14/243 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L +VP E             +W    L +L L  N +  +  D+  L  LT L
Sbjct: 171 LNLTKNQLTNVPAE-------------FWRLTSLGELYLDDNRLTSVPADIGQLTSLTWL 217

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L+ L +S N +  +P EI    +L + D S NQL  +P  +
Sbjct: 218 GLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEI 277

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   +++   S N +TSLP ++   + + KL +  N+LT +    I   T L  L  + 
Sbjct: 278 GQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAE-IGQLTSLWGLYLND 336

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L    L +N++ S+P+ +    SL EF + +N L+++PA + +L 
Sbjct: 337 NQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAILELE 396

Query: 254 KLG 256
             G
Sbjct: 397 AAG 399


>gi|345310727|ref|XP_001521360.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like, partial [Ornithorhynchus anatinus]
          Length = 746

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 230/498 (46%), Gaps = 45/498 (9%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           + L    N+I     +L +L  L  L +    L+ LP  IG+L  L+ L++  N I  +P
Sbjct: 198 ESLYAKRNSIRGFPPNLDSLSGLEELCLERIDLTCLPPEIGQLANLRVLNIDHNQIASLP 257

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
            E+G    L +  C  N L+E P+ LG   NL     + N + S+PE +    ++  L +
Sbjct: 258 KEVGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLKSVPESITRLQRLQVLHL 317

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
           + N+L +    L      LT L  S N ++ +P+ I  L  L  L ++ N++  +P    
Sbjct: 318 DSNQLEIFPKAL-CYLPKLTGLSLSGNAISSLPKDIKELRNLEELAMNHNQLTFLPGQFF 376

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNN 285
               L E ++G+N L +L   +G L +L  L L  N  K     +  C L L  LDL  N
Sbjct: 377 QLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITEKIGTCSL-LEKLDLRGN 435

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LPP   ++  L++L +  N L  L                                
Sbjct: 436 GLTQLPPNFRRLQKLKELYVGRNQLGRL-------------------------------- 463

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           E+ I+    LSV    L + G  ++ +P EI   G++T++DLS N + + P  L++ A+L
Sbjct: 464 EEHISRLKDLSV----LEISGNGIAHVPVEIKNCGQLTRVDLSANELGQFPLGLTALAAL 519

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
             L L+ N+I + P+ I + +  L  L+L  N L    S+    +  L  LDL  N I+ 
Sbjct: 520 NYLNLNGNEISEIPEEI-SEMERLIHLELRQNRLTSF-SNYLCRLRKLSYLDLGKNGISG 577

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +P  P  S++  L++L L   +    P ++  L+ L  LDLS+N +Q IP    NL  + 
Sbjct: 578 IP--PAVSNMLSLRDLILDYNRFSAFPKELCSLKGLETLDLSENQIQCIPLKICNLQRIR 635

Query: 525 ELDLSDNNISALPPELVS 542
            LD S+N   + P EL +
Sbjct: 636 RLDFSNNQFGSFPVELCA 653



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 227/499 (45%), Gaps = 19/499 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L+ L + HN I  L +++  L  L  L   HN L E PA +G L  L  LD++ N++ 
Sbjct: 241 ANLRVLNIDHNQIASLPKEVGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLK 300

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ I     L      SNQL+  P +L     L+    S N I+SLP+D+ +   + +
Sbjct: 301 SVPESITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIKELRNLEE 360

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L          L E+    N L  +  +IG+L  L  L L  N   +I  
Sbjct: 361 LAMNHNQLTFLPGQFF-QLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITE 419

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C  L +  +  N L+ LP    +L KL  L +  NQL        +L+ LSVL++S
Sbjct: 420 KIGTCSLLEKLDLRGNGLTQLPPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSVLEIS 479

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N ++ +P EI     L ++ L+ N L      L      A L YL   L  NE SE   
Sbjct: 480 GNGIAHVPVEIKNCGQLTRVDLSANELGQFPLGLT---ALAALNYL--NLNGNEISE--- 531

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E++  M   +      L L    L++  + +    +++ LDL +N I  +PP +S+  
Sbjct: 532 IPEEISEMERLI-----HLELRQNRLTSFSNYLCRLRKLSYLDLGKNGISGIPPAVSNML 586

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           SL+ LIL  N+   +P   L SL  L  L L  N ++ +P     ++  ++ LD S N  
Sbjct: 587 SLRDLILDYNRFSAFPKE-LCSLKGLETLDLSENQIQCIPLK-ICNLQRIRRLDFSNNQF 644

Query: 463 ASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
            S P E    ++L  L     R  +    P  +  L  L+ LD+S N+++ +P     L 
Sbjct: 645 GSFPVELCALTTLEELLLSQNRGRKFTHLPEQLTALTGLKELDISDNAIKELPRNIGELR 704

Query: 522 SLTELDLSDNNISALPPEL 540
           SL  L   +N +  LPP  
Sbjct: 705 SLVRLLARNNAVGCLPPSF 723



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 198/478 (41%), Gaps = 76/478 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L    N +   P  +  L  L+ L +    +  +P EIG    L   +   NQ+  LP  
Sbjct: 200 LYAKRNSIRGFPPNLDSLSGLEELCLERIDLTCLPPEIGQLANLRVLNIDHNQIASLPKE 259

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +GR + L      +N +   P  L     +  LD+ GN L                    
Sbjct: 260 VGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNL-------------------- 299

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +PE+I  L RL  L L  N++   P ++     L    +  NA+S+LP ++ +L
Sbjct: 300 ----KSVPESITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIKEL 355

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L ++ NQL     +  QL +L  + L +N L  L P IG +  LR LLL  N  +
Sbjct: 356 RNLEELAMNHNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFK 415

Query: 312 TLRSSLVNGPTPALLKYLRSR------LPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           T+   +    T +LL+ L  R      LP N                 R     KEL + 
Sbjct: 416 TITEKIG---TCSLLEKLDLRGNGLTQLPPN----------------FRRLQKLKELYVG 456

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L  +   I    +++ L++S N I  +P E+ +C  L  + LS N++  +P   LT+
Sbjct: 457 RNQLGRLEEHISRLKDLSVLEISGNGIAHVPVEIKNCGQLTRVDLSANELGQFPLG-LTA 515

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L++L+ L L+ N + ++P +                          S +  L  L LR+ 
Sbjct: 516 LAALNYLNLNGNEISEIPEE-------------------------ISEMERLIHLELRQN 550

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +L      + RL++L  LDL +N +  IP    N+ SL +L L  N  SA P EL S+
Sbjct: 551 RLTSFSNYLCRLRKLSYLDLGKNGISGIPPAVSNMLSLRDLILDYNRFSAFPKELCSL 608



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 169/373 (45%), Gaps = 12/373 (3%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ + L+++ L  N +E L   + NL  L VL +  N    +   IG   +L+ LD+ 
Sbjct: 374 QFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITEKIGTCSLLEKLDLR 433

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P        L +     NQL  L   + R  +LS  + S N I  +P ++ +C
Sbjct: 434 GNGLTQLPPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSVLEISGNGIAHVPVEIKNC 493

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            +++++D+  N+L      L A    L  L  + N ++ +PE I  + RLI L+L QNR+
Sbjct: 494 GQLTRVDLSANELGQFPLGLTA-LAALNYLNLNGNEISEIPEEISEMERLIHLELRQNRL 552

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S  + +     L+   +G N +S +P  +  +  L  L L  N+   +  E C L+ L 
Sbjct: 553 TSFSNYLCRLRKLSYLDLGKNGISGIPPAVSNMLSLRDLILDYNRFSAFPKELCSLKGLE 612

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            LDLS N +  +P +I  +  +R+L  + N   +    L      AL       L +N  
Sbjct: 613 TLDLSENQIQCIPLKICNLQRIRRLDFSNNQFGSFPVELC-----ALTTLEELLLSQNRG 667

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
            + +   E L T  T L    KEL +    +  +P  I E   + +L    N++  LPP 
Sbjct: 668 RKFTHLPEQL-TALTGL----KELDISDNAIKELPRNIGELRSLVRLLARNNAVGCLPPS 722

Query: 399 LSSCASLQTLILS 411
                 LQ L +S
Sbjct: 723 FRLLHGLQQLDMS 735



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 5/167 (2%)

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           +++  G    L   RNSI+  PP L S + L+ L L R  +   P  I   L++L  L +
Sbjct: 190 QVFPEGISESLYAKRNSIRGFPPNLDSLSGLEELCLERIDLTCLPPEI-GQLANLRVLNI 248

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 493
           D+N +  +P +  + + + Q+    +N+  L E P     L +L  L L    L+  P  
Sbjct: 249 DHNQIASLPKEVGRLVGLRQLF-CGHNL--LEEFPAVLGGLENLDILDLAGNNLKSVPES 305

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I RLQ+L++L L  N L+  P+    L  LT L LS N IS+LP ++
Sbjct: 306 ITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDI 352



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 26/151 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI- 103
           + L+ LIL +N      ++L +L  L  L++S N++  +P  I  L  ++ LD S N   
Sbjct: 586 LSLRDLILDYNRFSAFPKELCSLKGLETLDLSENQIQCIPLKICNLQRIRRLDFSNNQFG 645

Query: 104 -------------------------MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
                                      +P+++ + T L + D S N +KELP ++G   +
Sbjct: 646 SFPVELCALTTLEELLLSQNRGRKFTHLPEQLTALTGLKELDISDNAIKELPRNIGELRS 705

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           L    A NN +  LP        + +LD+ G
Sbjct: 706 LVRLLARNNAVGCLPPSFRLLHGLQQLDMSG 736


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 250/568 (44%), Gaps = 74/568 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L ++ N +  + E +  L  L+ L
Sbjct: 33  LDLSNQGLTSIPEEVF-------------DITDLEFLDVSRNKLTSIPEAIGRLQKLSRL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AIG L  L  L V  N +  +P  I     L       NQL E+PS +
Sbjct: 80  DAYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGV 139

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL     SNN +++ P  +    K+ KL ++ N+LT + +  + S   L  L  S 
Sbjct: 140 CSLPNLEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSG-VCSLPNLEVLNVSN 198

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS-------------LAEFYMG-- 238
           N L+  P  +  L +L  L ++ N++  +P   SG CS             L+ F  G  
Sbjct: 199 NKLSTFPPGVEKLQKLKELGIYDNQLTEVP---SGVCSLPNLEVLNVYNNKLSTFPPGVK 255

Query: 239 --NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             NN LS  P  + KL KL  L ++ NQL E     C L  L  L   NN LS  PP + 
Sbjct: 256 CHNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVE 315

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L +  N L  + S + + P   +L    ++L     S      E L  +    
Sbjct: 316 KLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKL-----STFPPGVEKLQKL---- 366

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               +EL +    L+ +PS +     +  L +  N +   PP +     L+ L ++ N++
Sbjct: 367 ----RELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQL 422

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIP--MLQILDL 458
            + P  +  SL +L  L +  NP+R++P D                F + P  +LQ+  L
Sbjct: 423 TEVPSCV-CSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEFPRQVLQLKTL 481

Query: 459 SYNIAS------LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
               A       +P+     +L HL  L L    LR  P+ +  L  LR++ L++N   +
Sbjct: 482 EELYAGGCKFDIVPDE--VGNLQHLWHLSLDINLLRTLPSTMSHLHNLRVVRLNKNKFDT 539

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPEL 540
            PE    L ++ +L++ +NNI+ LP  L
Sbjct: 540 FPEVLCELPAMEKLNIRNNNITRLPTAL 567



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 197/428 (46%), Gaps = 29/428 (6%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +    +K D S+  L  +P  +    +L     S N +TS+PE +    K+S+LD   N 
Sbjct: 26  TVNGRLKLDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNM 85

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I S   LT L   +N L  +P  I  L +L  L ++ N++  +PS +    +
Sbjct: 86  LTCLP-QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPN 144

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    + NN LS  P  + KL KL  L +  NQL E     C L  L VL++SNN LS  
Sbjct: 145 LEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTF 204

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  L++L +  N L  + S + + P                        E L  
Sbjct: 205 PPGVEKLQKLKELGIYDNQLTEVPSGVCSLP----------------------NLEVLNV 242

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
              +LS     +      LS  P  + +  ++ +L +  N + E+P  + S  +L+ L  
Sbjct: 243 YNNKLSTFPPGVKCHNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSA 302

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             NK+  +P  +   L  L  L + +N L +VPS G   +P L++L +  N +++ P  P
Sbjct: 303 YNNKLSTFPPGV-EKLQKLRELYIYDNQLTEVPS-GVCSLPNLEMLGVYNNKLSTFP--P 358

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L  L+ELY+   QL E P+ +  L  L +L +  N L + P G + L  L +L ++
Sbjct: 359 GVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYIN 418

Query: 530 DNNISALP 537
           DN ++ +P
Sbjct: 419 DNQLTEVP 426



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 185/402 (46%), Gaps = 54/402 (13%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +TS+PE++ D + +  LDV  NKLT                         +PE IG
Sbjct: 36  SNQGLTSIPEEVFDITDLEFLDVSRNKLT------------------------SIPEAIG 71

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L +L RLD + N +  +P +I     L   Y+  N L+ LP  + KL KL  L ++ NQ
Sbjct: 72  RLQKLSRLDAYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQ 131

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L E     C L  L VL +SNN LS  PP + K+  LRKL +  N L  + S + + P  
Sbjct: 132 LTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNL 191

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
            +L    ++L     S      E L  +        KEL +    L+ +PS +     + 
Sbjct: 192 EVLNVSNNKL-----STFPPGVEKLQKL--------KELGIYDNQLTEVPSGVCSLPNLE 238

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L++  N +   PP +  C +        NK+  +P  +   L  L  L + +N L +VP
Sbjct: 239 VLNVYNNKLSTFPPGVK-CHN--------NKLSTFPPGV-EKLQKLKELGIYDNQLTEVP 288

Query: 444 SDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           S G   +P L+ L  +YN  +++ P  P    L  L+ELY+   QL E P+ +  L  L 
Sbjct: 289 S-GVCSLPNLEKLS-AYNNKLSTFP--PGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLE 344

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +L +  N L + P G + L  L EL + DN ++ +P  + S+
Sbjct: 345 MLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSL 386



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 223/518 (43%), Gaps = 79/518 (15%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
           SG  +L N  +  V N     F    E     +   L+KL +  N + ++   + +LP L
Sbjct: 137 SGVCSLPNLEVLSVSNNKLSTFPPGVE-----KLQKLRKLFIKDNQLTEVPSGVCSLPNL 191

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            VLNVS+NKLS  P  + +L  LK L +  N + ++P  + S   L   +  +N+L   P
Sbjct: 192 EVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFP 251

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +         K  NN +++ P  +    K+ +L +  N+LT + +  + S   L +L 
Sbjct: 252 PGV---------KCHNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSG-VCSLPNLEKLS 301

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM---GNNALSALPA 247
           A  N L+  P  +  L +L  L ++ N++  +PS   G CSL    M    NN LS  P 
Sbjct: 302 AYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPS---GVCSLPNLEMLGVYNNKLSTFPP 358

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            + KL KL  L ++ NQL E     C L  L +L + NN LS  PP + K+  LRKL + 
Sbjct: 359 GVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYIN 418

Query: 307 GNPLRTLRSSLVN---------GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            N L  + S + +         GP P        RLP++            +T   RL  
Sbjct: 419 DNQLTEVPSCVCSLPNLEVLSVGPNPI------RRLPDD------------VTRLARL-- 458

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             K LS+ G      P ++ +   + +L         +P E+ +   L  L L  N ++ 
Sbjct: 459 --KTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRT 516

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P + ++ L +L  ++L+ N       D F ++                       LP +
Sbjct: 517 LP-STMSHLHNLRVVRLNKNKF-----DTFPEV--------------------LCELPAM 550

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           ++L +R   +   PT + R  +L+ L++S N +   P+
Sbjct: 551 EKLNIRNNNITRLPTALHRADKLKDLNVSGNPMSYPPQ 588



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 148/351 (42%), Gaps = 25/351 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL   +N +      +  L  L  L +  N+L+E+P+ +  L  L+ L V  N +  
Sbjct: 296 NLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLST 355

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN +++ P  +    K+ KL
Sbjct: 356 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKL 415

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT + +  + S   L  L    N +  +P+ +  L+RL  L +   +    P  
Sbjct: 416 YINDNQLTEVPS-CVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEFPRQ 474

Query: 226 ISGCCSLAEFYMGN-----------------------NALSALPAELGKLSKLGTLDLHS 262
           +    +L E Y G                        N L  LP+ +  L  L  + L+ 
Sbjct: 475 VLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRTLPSTMSHLHNLRVVRLNK 534

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+   +    C+L  +  L++ NN+++ LP  + +   L+ L ++GNP+      +    
Sbjct: 535 NKFDTFPEVLCELPAMEKLNIRNNNITRLPTALHRADKLKDLNVSGNPMSYPPQEVRKQG 594

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           T A++ +L+    ++E   ++  +  +    T+    ++ L L    + AI
Sbjct: 595 TGAIMAFLKQEAEKDERILSAFNRLSVRMSQTQWKPLARSLGLSNRAVDAI 645


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 270/623 (43%), Gaps = 106/623 (17%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL--SNNL- 179
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L   N L 
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLT 277

Query: 180 -----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I     L  L  S N L  +P  IG L  L  LDL  N++ ++P  I+   +L E
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEACQLR---------- 276
            Y+  N L+ +P E+ +L  L  L L +N++        K   ++   LR          
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE 397

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                        L + +LS N L+ +P EIG +  LR L L  
Sbjct: 398 IGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLEN 457

Query: 308 NPLRTLRSS------------LVNGPTPALLKYLRSRLP----ENEDSEASTTKEDL-IT 350
           N L+TL               L+N       K +++ LP    +  D E   T  +L + 
Sbjct: 458 NQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLA 517

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L + S  LSLE    S  P EI     +  L L   S+  LP E+     L+ L L
Sbjct: 518 LEQPLKILS--LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSL 575

Query: 411 SRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
             N++K  P  I  L +L SL      NN    +P    K+I  LQ      N+ SL  N
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP----KEIARLQ------NLRSLLLN 623

Query: 469 P-PFSSLP----HLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
              F   P     L++L +  +   QL   P  I RL+ L++LDLS N L ++P     L
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +LTEL L  N I  LP E+  +
Sbjct: 684 HNLTELYLQYNRIKMLPEEIARL 706



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 257/564 (45%), Gaps = 66/564 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           L+LS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  + N L  +P+ IG L +L +L+L  N+I ++P                N L+
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLT 277

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  N L+ LP EI K+  L++
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L  +   +       +L+   +R+       ++  KE         S   +EL
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILQLKNNRI-------STLPKE------IEKSKNLQEL 384

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P  I
Sbjct: 385 NLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 444

Query: 423 LTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL-----------------DLSYNIA 463
             +L +L  L L+NN L+ +P   +  +D+ +L +L                 + + ++ 
Sbjct: 445 -GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLR 503

Query: 464 SLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            + E   + +L         +  L L   Q    P +ILRL+ LR L L   SL ++P+ 
Sbjct: 504 DVEEGGTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKE 563

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L  L L  N + +LP E+
Sbjct: 564 IVRLKHLEHLSLGLNQLKSLPKEI 587



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 214/471 (45%), Gaps = 57/471 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  ILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         PA +  L++                       L +    LSL    L+
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKN-----------------------LQI----LSLSYNRLA 300

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI +   +  LDL  N +  LP E++   +L+ L L+ NK+   P  I   L +L+
Sbjct: 301 TLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEI-WELENLT 359

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L+L NN +  +P +  K    LQ L+L  N + +LP       L     L   R+++  
Sbjct: 360 ILQLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKI-- 416

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 417 LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 231/543 (42%), Gaps = 92/543 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 246

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 247 LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 306

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 307 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKN 365

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-----------------------LS 253
           NRI ++P  I    +L E  +  N L  LP E+G+                       L 
Sbjct: 366 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L   +L  N+L     E   L+ L +L L NN L  LP ++ K+  L  L L  NPL +
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLSVTS------------ 359
                +    P     LR       D E   T  +L + +   L + S            
Sbjct: 486 EERKKIQALLPNCNIDLR-------DVEEGGTYRNLNLALEQPLKILSLSLEYQQFSLFP 538

Query: 360 ---------KELSLEGMNLSAIPSEIWEAGEITKLDL----------------------- 387
                    + LSL   +L A+P EI     +  L L                       
Sbjct: 539 KEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDI 598

Query: 388 -SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N  + LP E++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P + 
Sbjct: 599 GANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EK 656

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ+LDLS+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L
Sbjct: 657 IGRLKGLQMLDLSHNRLTTLPSE--IGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTL 714

Query: 506 SQN 508
            +N
Sbjct: 715 YEN 717



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 185/423 (43%), Gaps = 37/423 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGGTYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+ L L  
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYE 716

Query: 413 NKI 415
           N I
Sbjct: 717 NPI 719


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 271/623 (43%), Gaps = 106/623 (17%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL--SNNL- 179
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L   N L 
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLT 277

Query: 180 -----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I     L  L  S N L  +P  IG L  L  LDL  N++ ++P  I+   +L E
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEACQLR---------- 276
            Y+  N L+ +P E+ +L  L  L L +N++        K   ++   LR          
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE 397

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                        L + +LS N L+ +P EIG +  LR L L  
Sbjct: 398 IGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLEN 457

Query: 308 NPLRTLRSS------------LVNGPTPALLKYLRSRLP----ENEDSEASTTKEDL-IT 350
           N L+TL               L+N       K +++ LP    +  D E   T  +L + 
Sbjct: 458 NQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLA 517

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L + S  LSLE    S  P EI +   +  L L   S+  LP E+     L+ L L
Sbjct: 518 LEQPLKILS--LSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 411 SRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
             N++K  P  I  L +L SL      NN    +P    K+I  LQ      N+ SL  N
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP----KEIARLQ------NLRSLLLN 623

Query: 469 P-PFSSLP----HLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
              F   P     L++L +  +   QL   P  I RL+ L++LDLS N L ++P     L
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +LTEL L  N I  LP E+  +
Sbjct: 684 HNLTELYLQYNRIKTLPEEIARL 706



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 257/564 (45%), Gaps = 66/564 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  + N L  +P+ IG L +L +L+L  N+I ++P                N L+
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLT 277

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  N L+ LP EI K+  L++
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L  +   +       +L+   +R+       ++  KE         S   +EL
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRI-------STLPKE------IEKSKNLQEL 384

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P  I
Sbjct: 385 NLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 444

Query: 423 LTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL-----------------DLSYNIA 463
             +L +L  L L+NN L+ +P   +  +D+ +L +L                 + + ++ 
Sbjct: 445 -GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLR 503

Query: 464 SLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            + E   + +L         +  L L   Q    P +IL+L+ LR L L   SL ++P+ 
Sbjct: 504 DVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKE 563

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L  L L  N + +LP E+
Sbjct: 564 IVRLKHLERLSLGLNQLKSLPKEI 587



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 266/594 (44%), Gaps = 82/594 (13%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L +++  L  L  L++  N+L+ 
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLAT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            PA I EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL   
Sbjct: 86  FPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  
Sbjct: 146 NLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL-- 260
           IG L  L  L L +N++ + P  I    +L E  +  N L  LP E+G+L KL  L+L  
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDG 264

Query: 261 -------HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
                    NQL     E  QL+ L +L LS N L+ LP EIG++  L+ L L GN L T
Sbjct: 265 NQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTT 324

Query: 313 L----------RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK-- 360
           L          +   +NG     L  +   + E E+      K + I+   +    SK  
Sbjct: 325 LPREINKLKNLKELYLNGNK---LTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNL 381

Query: 361 -ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
            EL+L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P
Sbjct: 382 QELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIP 441

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL--------------------- 456
             I  +L +L  L L+NN L+ +P   +  +D+ +L +L                     
Sbjct: 442 KEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNI 500

Query: 457 DL-------SYNIASLPENPP------------FSSLP-------HLQELYLRRMQLREA 490
           DL       +Y   +L    P            FS  P       +L+ L L    L   
Sbjct: 501 DLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVAL 560

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN-ISALPPELVSV 543
           P +I+RL+ L  L L  N L+S+P+    L +L  LD+  NN    LP E+  +
Sbjct: 561 PKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 232/543 (42%), Gaps = 92/543 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 246

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 247 LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 306

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 307 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 365

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-----------------------LS 253
           NRI ++P  I    +L E  +  N L  LP E+G+                       L 
Sbjct: 366 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L   +L  N+L     E   L+ L +L L NN L  LP ++ K+  L  L L  NPL +
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLSVTS------------ 359
                +    P     LR       D E   T  +L + +   L + S            
Sbjct: 486 EERKKIQALLPNCNIDLR-------DVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFP 538

Query: 360 ---------KELSLEGMNLSAIPSEIWEAGEITKLDL----------------------- 387
                    + LSL   +L A+P EI     + +L L                       
Sbjct: 539 KEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDI 598

Query: 388 -SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N  + LP E++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P + 
Sbjct: 599 GANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EK 656

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ+LDLS+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L
Sbjct: 657 IGRLKGLQMLDLSHNRLTTLPSE--IGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTL 714

Query: 506 SQN 508
            +N
Sbjct: 715 YEN 717



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 185/423 (43%), Gaps = 37/423 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGRTYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILKLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+ L L  
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYE 716

Query: 413 NKI 415
           N I
Sbjct: 717 NPI 719


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 224/455 (49%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 152 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 195

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 196 RNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 255

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 256 ELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 315

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 316 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 375

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 376 TALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 435

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                DL           ++
Sbjct: 436 VLDLEENKIESL---------PNEIGFLR----------------DL-----------QK 459

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   ++++P  I     +T L +  N++  LP E+ +  +L +L ++ N  + + P 
Sbjct: 460 LILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPF 519

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL Q+P +     P L I
Sbjct: 520 E-LALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 553



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 65/453 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKLSE+P  + +L  L +L + FN +  
Sbjct: 131 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRY 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N+++ELP+ +G+ +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 191 VSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTL 250

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG+L  L RL L  NR+ +IP S
Sbjct: 251 DLQHNELL------------------------DIPDTIGNLISLTRLGLRYNRLTNIPKS 286

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  ++L
Sbjct: 287 LANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINL 346

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            +N +  +P  I  +   L KL +  N L  L         P  +    + +  N  +  
Sbjct: 347 EHNKIDKIPYGIFSRAKNLAKLNMKENQLTAL---------PLDIGTWINMVELNLGTNQ 397

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T   D I     L V    L L    L  IP+ I    ++  LDL  N I+ LP E+  
Sbjct: 398 LTKIPDDIQCLQNLEV----LILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGF 453

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y 
Sbjct: 454 LRDLQKLILQSNQVTSLPRAI-GHLTNLTYLSVGENNLNYLP----EEIGTLENLDSLYV 508

Query: 461 ----NIASLP--------------ENPPFSSLP 475
               N+ +LP              EN P S +P
Sbjct: 509 NDNANLHNLPFELALCTNLSIMSIENCPLSQIP 541



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 217/456 (47%), Gaps = 28/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+S ++I  +P  +   T L++F    N+L  LP  +G   NL     S N +TSL
Sbjct: 86  LERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 145

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL+ + + ++   T LT L    N +  + + I +L+ L  L
Sbjct: 146 PNTLENLKSLRVLDLRHNKLSEIPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 204

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 205 SLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 264

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----RSSLVNGPTPALLK 327
             L  L+ L L  N L+ +P  +     + +  + GN +  L     +SL +  T  L +
Sbjct: 265 GNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSR 324

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    ++ +                   ++LE   +  IP  I+  A  + KL+
Sbjct: 325 NAFTAYPSGGPAQFTNVYS---------------INLEHNKIDKIPYGIFSRAKNLAKLN 369

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+  
Sbjct: 370 MKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-S 427

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L +
Sbjct: 428 IANLRKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSV 485

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +N+L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 486 GENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 521



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           E  L G  L  +P EI   G +  L LS NS+  LP  L +  SL+ L L  NK+ + PD
Sbjct: 111 EFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPD 170

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            +   L++L+ L L  N +R V SD  +++  L +L L  N I  LP       L +L  
Sbjct: 171 VVY-KLTNLTTLFLRFNRVRYV-SDNIRNLTNLTMLSLRENKIRELPAG--IGKLINLIT 226

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
             +    L   P +I    QL  LDL  N L  IP+   NL SLT L L  N ++ +P  
Sbjct: 227 FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKS 286

Query: 540 LVS 542
           L +
Sbjct: 287 LAN 289


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 270/623 (43%), Gaps = 106/623 (17%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL--SNNL- 179
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L   N L 
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLT 277

Query: 180 -----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I     L  L  S N L  +P  IG L  L  LDL  N++ ++P  I+   +L E
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEACQLR---------- 276
            Y+  N L+ +P E+ +L  L  L L +N++        K   ++   LR          
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE 397

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                        L + +LS N L+ +P EIG +  LR L L  
Sbjct: 398 IGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLEN 457

Query: 308 NPLRTLRSS------------LVNGPTPALLKYLRSRLP----ENEDSEASTTKEDL-IT 350
           N L+TL               L+N       K +++ LP    +  D E   T  +L + 
Sbjct: 458 NQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLA 517

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L + S  LSLE    S  P EI     +  L L   S+  LP E+     L+ L L
Sbjct: 518 LEQPLKILS--LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 411 SRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
             N++K  P  I  L +L SL      NN    +P    K+I  LQ      N+ SL  N
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP----KEIARLQ------NLRSLLLN 623

Query: 469 P-PFSSLP----HLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
              F   P     L++L +  +   QL   P  I RL+ L++LDLS N L ++P     L
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +LTEL L  N I  LP E+  +
Sbjct: 684 HNLTELYLQYNRIKTLPEEIARL 706



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 257/564 (45%), Gaps = 66/564 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  + N L  +P+ IG L +L +L+L  N+I ++P                N L+
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLT 277

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  N L+ LP EI K+  L++
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L  +   +       +L+   +R+       ++  KE         S   +EL
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRI-------STLPKE------IEKSKNLQEL 384

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P  I
Sbjct: 385 NLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 444

Query: 423 LTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL-----------------DLSYNIA 463
             +L +L  L L+NN L+ +P   +  +D+ +L +L                 + + ++ 
Sbjct: 445 -GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLR 503

Query: 464 SLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            + E   + +L         +  L L   Q    P +ILRL+ LR L L   SL ++P+ 
Sbjct: 504 DVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKE 563

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L  L L  N + +LP E+
Sbjct: 564 IVRLKHLERLSLGLNQLKSLPKEI 587



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 266/594 (44%), Gaps = 82/594 (13%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L +++  L  L  L++  N+L+ 
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLAT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            PA I EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL   
Sbjct: 86  FPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  
Sbjct: 146 NLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL-- 260
           IG L  L  L L +N++ + P  I    +L E  +  N L  LP E+G+L KL  L+L  
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDG 264

Query: 261 -------HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
                    NQL     E  QL+ L +L LS N L+ LP EIG++  L+ L L GN L T
Sbjct: 265 NQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTT 324

Query: 313 L----------RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK-- 360
           L          +   +NG     L  +   + E E+      K + I+   +    SK  
Sbjct: 325 LPREINKLKNLKELYLNGNK---LTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNL 381

Query: 361 -ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
            EL+L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P
Sbjct: 382 QELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIP 441

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL--------------------- 456
             I  +L +L  L L+NN L+ +P   +  +D+ +L +L                     
Sbjct: 442 KEI-GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNI 500

Query: 457 DL-------SYNIASLPENPP------------FSSLP-------HLQELYLRRMQLREA 490
           DL       +Y   +L    P            FS  P       +L+ L L    L   
Sbjct: 501 DLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVAL 560

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN-ISALPPELVSV 543
           P +I+RL+ L  L L  N L+S+P+    L +L  LD+  NN    LP E+  +
Sbjct: 561 PKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 232/543 (42%), Gaps = 92/543 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 246

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 247 LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 306

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 307 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 365

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-----------------------LS 253
           NRI ++P  I    +L E  +  N L  LP E+G+                       L 
Sbjct: 366 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L   +L  N+L     E   L+ L +L L NN L  LP ++ K+  L  L L  NPL +
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLSVTS------------ 359
                +    P     LR       D E   T  +L + +   L + S            
Sbjct: 486 EERKKIQALLPNCNIDLR-------DVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFP 538

Query: 360 ---------KELSLEGMNLSAIPSEIWEAGEITKLDL----------------------- 387
                    + LSL   +L A+P EI     + +L L                       
Sbjct: 539 KEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDI 598

Query: 388 -SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N  + LP E++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P + 
Sbjct: 599 GANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EK 656

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ+LDLS+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L
Sbjct: 657 IGRLKGLQMLDLSHNRLTTLPSE--IGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTL 714

Query: 506 SQN 508
            +N
Sbjct: 715 YEN 717



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 185/423 (43%), Gaps = 37/423 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGRTYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+ L L  
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYE 716

Query: 413 NKI 415
           N I
Sbjct: 717 NPI 719


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 270/623 (43%), Gaps = 106/623 (17%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL--SNNL- 179
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L   N L 
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLT 277

Query: 180 -----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I     L  L  S N L  +P  IG L  L  LDL  N++ ++P  I+   +L E
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEACQLR---------- 276
            Y+  N L+ +P E+ +L  L  L L +N++        K   ++   LR          
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE 397

Query: 277 -----------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                        L + +LS N L+ +P EIG +  LR L L  
Sbjct: 398 IGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLEN 457

Query: 308 NPLRTLRSS------------LVNGPTPALLKYLRSRLP----ENEDSEASTTKEDL-IT 350
           N L+TL               L+N       K +++ LP    +  D E   T  +L + 
Sbjct: 458 NQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLA 517

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L + S  LSLE    S  P EI     +  L L   S+  LP E+     L+ L L
Sbjct: 518 LEQPLKILS--LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSL 575

Query: 411 SRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
             N++K  P  I  L +L SL      NN    +P    K+I  LQ      N+ SL  N
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP----KEIARLQ------NLRSLLLN 623

Query: 469 P-PFSSLP----HLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
              F   P     L++L +  +   QL   P  I RL+ L++LDLS N L ++P     L
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +LTEL L  N I  LP E+  +
Sbjct: 684 HNLTELYLQYNRIKTLPEEIARL 706



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 257/564 (45%), Gaps = 66/564 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  + N L  +P+ IG L +L +L+L  N+I ++P                N L+
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLT 277

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  N L+ LP EI K+  L++
Sbjct: 278 TLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKE 337

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L  +   +       +L+   +R+       ++  KE         S   +EL
Sbjct: 338 LYLNGNKLTIVPKEIWELENLTILRLKNNRI-------STLPKE------IEKSKNLQEL 384

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +L G  L  +P EI E   + +L+L  N I+ LP E+ +  +L    LS NK+   P  I
Sbjct: 385 NLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEI 444

Query: 423 LTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL-----------------DLSYNIA 463
             +L +L  L L+NN L+ +P   +  +D+ +L +L                 + + ++ 
Sbjct: 445 -GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLR 503

Query: 464 SLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            + E   + +L         +  L L   Q    P +ILRL+ LR L L   SL ++P+ 
Sbjct: 504 DVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKE 563

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L  L L  N + +LP E+
Sbjct: 564 IVRLKHLEHLSLGLNQLKSLPKEI 587



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 214/471 (45%), Gaps = 57/471 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         PA +  L++                       L +    LSL    L+
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKN-----------------------LQI----LSLSYNRLA 300

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI +   +  LDL  N +  LP E++   +L+ L L+ NK+   P  I   L +L+
Sbjct: 301 TLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEI-WELENLT 359

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L+L NN +  +P +  K    LQ L+L  N + +LP       L     L   R+++  
Sbjct: 360 ILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKI-- 416

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 417 LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 231/543 (42%), Gaps = 92/543 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 246

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 247 LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 306

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 307 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 365

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-----------------------LS 253
           NRI ++P  I    +L E  +  N L  LP E+G+                       L 
Sbjct: 366 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L   +L  N+L     E   L+ L +L L NN L  LP ++ K+  L  L L  NPL +
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 485

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLSVTS------------ 359
                +    P     LR       D E   T  +L + +   L + S            
Sbjct: 486 KERKKIQALLPNCNIDLR-------DVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFP 538

Query: 360 ---------KELSLEGMNLSAIPSEIWEAGEITKLDL----------------------- 387
                    + LSL   +L A+P EI     +  L L                       
Sbjct: 539 KEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDI 598

Query: 388 -SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N  + LP E++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P + 
Sbjct: 599 GANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EK 656

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  LQ+LDLS+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L
Sbjct: 657 IGRLKGLQMLDLSHNRLTTLPSE--IGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTL 714

Query: 506 SQN 508
            +N
Sbjct: 715 YEN 717



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 185/423 (43%), Gaps = 37/423 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGETYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+ L L  
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYE 716

Query: 413 NKI 415
           N I
Sbjct: 717 NPI 719


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 224/455 (49%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                DL           ++
Sbjct: 481 VLDLEENKIESL---------PNEIGFLR----------------DL-----------QK 504

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   ++++P  I     +T L +  N++  LP E+ +  +L +L ++ N  + + P 
Sbjct: 505 LILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPF 564

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL Q+P +     P L I
Sbjct: 565 E-LALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 65/453 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKLSE+P  + +L  L +L + FN +  
Sbjct: 176 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRY 235

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N+++ELP+ +G+ +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 236 VSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTL 295

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG+L  L RL L  NR+ +IP S
Sbjct: 296 DLQHNELL------------------------DIPDTIGNLISLTRLGLRYNRLTNIPKS 331

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  ++L
Sbjct: 332 LANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINL 391

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            +N +  +P  I  +   L KL +  N L  L         P  +    + +  N  +  
Sbjct: 392 EHNKIDKIPYGIFSRAKNLAKLNMKENQLTAL---------PLDIGTWINMVELNLGTNQ 442

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T   D I     L V    L L    L  IP+ I    ++  LDL  N I+ LP E+  
Sbjct: 443 LTKIPDDIQCLQNLEV----LILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGF 498

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y 
Sbjct: 499 LRDLQKLILQSNQVTSLPRAI-GHLTNLTYLSVGENNLNYLP----EEIGTLENLDSLYV 553

Query: 461 ----NIASLP--------------ENPPFSSLP 475
               N+ +LP              EN P S +P
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIP 586



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 218/452 (48%), Gaps = 20/452 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+S ++I  +P  +   T LV+F    N+L  LP  +G   NL     S N +TSL
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 190

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL+ + + ++   T LT L    N +  + + I +L+ L  L
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPD-VVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTML 249

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 250 SLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 309

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L  L+ L L  N L+ +P  +     + +  + GN +    S L +G   +L      
Sbjct: 310 GNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQV----SQLPDGLLASLSDLTTI 365

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N  +   +      T     +V S  ++LE   +  IP  I+  A  + KL++  N
Sbjct: 366 TLSRNAFTAYPSGGPAQFT-----NVYS--INLEHNKIDKIPYGIFSRAKNLAKLNMKEN 418

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+    ++
Sbjct: 419 QLTALPLDIGTWINMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-SIANL 476

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+
Sbjct: 477 RKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENN 534

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 535 LNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 566



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           E  L G  L  +P EI   G +  L LS NS+  LP  L +  SL+ L L  NK+ + PD
Sbjct: 156 EFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPD 215

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            +   L++L+ L L  N +R V SD  +++  L +L L  N I  LP       L +L  
Sbjct: 216 VVY-KLTNLTTLFLRFNRVRYV-SDNIRNLTNLTMLSLRENKIRELPAG--IGKLINLIT 271

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
             +    L   P +I    QL  LDL  N L  IP+   NL SLT L L  N ++ +P  
Sbjct: 272 FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKS 331

Query: 540 LVS 542
           L +
Sbjct: 332 LAN 334


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 165/565 (29%), Positives = 266/565 (47%), Gaps = 53/565 (9%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R    A+ +  L+LS   L  VP EV +               +L +L L  NN+  L  
Sbjct: 38  RKFNRAKWTAKLDLSCNGLTFVPIEVVR-------------MTNLTQLKLFKNNLTNLPS 84

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  LT L+V  NK+S LP  +G+L  L+ L +S+N   K+   IG  T L      
Sbjct: 85  AIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKAD 144

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N +  L    G+     D + SNN + SLP ++   + +++L +  N L  +    I  
Sbjct: 145 NNSITHLIPEFGKL----DLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKE-IGD 199

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRL--IRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              L EL    N L  +P  +G LS+L  + LD +++ I S+P++I  C  L E ++ +N
Sbjct: 200 LENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDN 259

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+++P  +   +++  L L  N+++E   +   L  L  L L+ N L+ LP EIG +  
Sbjct: 260 RLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLAN 319

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRL-- 355
           L K+LL+ N L+ +   + N  +   L   ++RLP   NE  +     E+  T   ++  
Sbjct: 320 LEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNL-EEFRTHHNQIQA 378

Query: 356 --SVTSKELSLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             S   + L L+ ++     L+ +P  I E   +  LDL+ N+++ LP  + +  +L+ L
Sbjct: 379 IPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKL 438

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
           +L RNK+   P  +   L++L  L L  N L  +P  G  ++  L   +L  N +  LP 
Sbjct: 439 LLYRNKLTILPLTV-GKLTNLETLDLQTNRLTSLPP-GVGNLKNLMKFNLIQNALVKLP- 495

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT------ 521
            P   SL  L +L LR  QL   P  +  L  L+IL LS N L  +P   ++LT      
Sbjct: 496 -PSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQ 554

Query: 522 ---------SLTELDLSDNNISALP 537
                    SL  L +SDN +  LP
Sbjct: 555 DLPQKSLTPSLQVLTISDNALETLP 579



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 159/559 (28%), Positives = 246/559 (44%), Gaps = 92/559 (16%)

Query: 8   ARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNL 67
           A  + SL +  R + D    V  ++       KW   +DL     + N +  +  ++  +
Sbjct: 12  ASHNDSLEVPPREVVDKGAVVILDYLRKFNRAKWTAKLDL-----SCNGLTFVPIEVVRM 66

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
             LT L +  N L+ LP+AIG L  L SL V  N I  +P E+G    L K   S N   
Sbjct: 67  TNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYNDFT 126

Query: 128 ELPSSLGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           +L   +G+   L   KA NN IT L PE         KLD+       LSNN + S    
Sbjct: 127 KLTPVIGQMTKLESLKADNNSITHLIPE-------FGKLDLR------LSNNQLES---- 169

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                       +P  +GS++ L +L L  N + ++P  I    +L E  + NN+L  +P
Sbjct: 170 ------------LPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIP 217

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            ELGKLS+L  L L  N+                DL N     LP  IG+   L++L L+
Sbjct: 218 MELGKLSQLEALMLDHNK----------------DLIN----SLPANIGRCEKLKELWLS 257

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L ++   +       +LK + +R+ E      + T             + KEL L  
Sbjct: 258 DNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLT-------------SLKELHLAW 304

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +P EI     + K+ LS N +Q +P E+ +  SL  L + +N++   P+ I   L
Sbjct: 305 NQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEI-GDL 363

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN-PPFSSLPHL------- 477
            +L   +  +N ++ +PS     +  L+ILD S N + +LP++    +SL HL       
Sbjct: 364 DNLEEFRTHHNQIQAIPS-SIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNL 422

Query: 478 -------------QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
                        ++L L R +L   P  + +L  L  LDL  N L S+P G  NL +L 
Sbjct: 423 EALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLM 482

Query: 525 ELDLSDNNISALPPELVSV 543
           + +L  N +  LPP + S+
Sbjct: 483 KFNLIQNALVKLPPSIGSL 501



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 17/288 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+K++L+HN ++++  +++NL  LT LNV  N+L  LP  IG+L  L+      N I  
Sbjct: 319 NLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQA 378

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  IG    L   D S NQL  LP S+G   +L+    + N + +LP  + + + + KL
Sbjct: 379 IPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKL 438

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKLT+L    +   T L  L    N L  +P  +G+L  L++ +L QN ++ +P S
Sbjct: 439 LLYRNKLTILPLT-VGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPS 497

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEACQ--- 274
           I    SL +  +  N L+ LPA +  L  L  L L +N+L E          ++ CQ   
Sbjct: 498 IGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLP 557

Query: 275 -----LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                  L VL +S+N+L  LP +IG    L +L ++ N L+ L +++
Sbjct: 558 QKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATI 605



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 198/423 (46%), Gaps = 53/423 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHN---------NI---EKLK 61
           L L N SL  +P E+ K                L+ L+L HN         NI   EKLK
Sbjct: 206 LTLQNNSLERIPMELGK-------------LSQLEALMLDHNKDLINSLPANIGRCEKLK 252

Query: 62  E------DLRNLPLLT-------VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           E       L ++P++        VL +  N++ ELP  IG L  LK L +++N +  +P 
Sbjct: 253 ELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPV 312

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG+   L K   S N+L+ +P  +    +L+      N + SLP ++ D   + +    
Sbjct: 313 EIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTH 372

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N++  + ++ I     L  L AS+N L  +P++IG L+ L  LDL  N + ++P +I  
Sbjct: 373 HNQIQAIPSS-IGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGN 431

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L +  +  N L+ LP  +GKL+ L TLDL +N+L         L+ L   +L  N+L
Sbjct: 432 LTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNAL 491

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LPP IG + +L +L L  N L  L +S+       L       L  N   E     ED
Sbjct: 492 VKLPPSIGSLESLTQLSLRENQLAILPASM-----NMLFNLQILSLSANRLYELPPLIED 546

Query: 348 LITMATRLSVTSKEL--SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPEL- 399
           L T+     +  K L  SL+ + +S      +P +I     +T+L +S N ++ELP  + 
Sbjct: 547 LTTLQVCQDLPQKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIG 606

Query: 400 SSC 402
           +SC
Sbjct: 607 ASC 609



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 16/209 (7%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   E   L  L LA NN+E L   + NL  L  L +  NKL+ LP  +G+L  L++LD+
Sbjct: 404 DSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDL 463

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +P  +G+   L+KF+   N L +LP S+G   +L+      N +  LP  +  
Sbjct: 464 QTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILPASMNM 523

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTM---------------LTELIASKNLLNGMPETI 203
              +  L +  N+L  L   LI   T                L  L  S N L  +P  I
Sbjct: 524 LFNLQILSLSANRLYELP-PLIEDLTTLQVCQDLPQKSLTPSLQVLTISDNALETLPVKI 582

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           G+   L +L +  N++  +P++I   C L
Sbjct: 583 GNFRALTQLAVSNNQLKELPATIGASCIL 611


>gi|307187771|gb|EFN72743.1| Leucine-rich repeat-containing protein 40 [Camponotus floridanus]
          Length = 604

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 263/589 (44%), Gaps = 107/589 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+  AR +G LNLS++ L  VP++V+                 D   + ++WWE   L+ 
Sbjct: 30  IIIRARKTGQLNLSSKGLSTVPDQVWNINELTEEELRDLHFELDYEHKEERWWEQEPLKT 89

Query: 50  LILAHNNIEKLKEDLR-----------------------NLPLLTVLNVSHNKLSELPAA 86
           L L+ N++  + + ++                       +L  L ++N+S NKL  LP  
Sbjct: 90  LDLSSNSLITIDDKIQFLTELSNLNLQNNLLEELPPEVGSLHKLKIINLSDNKLENLPPQ 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
              L  L  L +  N +  +  EIG+   L   D S N L +LP  +G  + L     S 
Sbjct: 150 FYMLEELHELYLKNNHLNMLESEIGNLIMLTCMDLSYNNLNKLPIGMGYLVRLVTLNLSY 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP D+     +  LDV  N+L VL                           +G L
Sbjct: 210 NMIKELPPDMTSMRSLRILDVSFNQLEVLP-------------------------PLGEL 244

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQL 265
            +  ++    N +   P  ISGC +L   ++ NN +  + ++ L     L  L L +N++
Sbjct: 245 RKAEKIMFQSNNLKKFPD-ISGCSALTVLHLDNNNIPEIDSQCLETAGHLKKLTLQNNKI 303

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +    E  +L  L V DLS+N++S +P  IG +  L++ ++ GN ++ +R+ ++   TP 
Sbjct: 304 EVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNIKNIRADIIRCGTPR 363

Query: 325 LLKYLRSRLPENEDSEASTTKEDL---ITMATR------LSVTSKELSLEGMNLSAIPSE 375
           +L ++R    +  DS +  T+E L   I+++ R      +   +K LSL G NL  +P E
Sbjct: 364 ILTHIR----QITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLAGQNLLDLPEE 419

Query: 376 IWE---AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           + E      +T +DLSRN + EL  ++S   S+  L L+ N +   P+ I      L  L
Sbjct: 420 VLENAVEASVTTIDLSRNKLSELSDKMSIVISVMDLKLTSNHLTHLPEWIGEKYKYLQIL 479

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            +  N L+ +P      +  L+ +DLS+N         F+ +P             EA  
Sbjct: 480 DISKNYLKSLPL-SISCLKYLRDVDLSFN--------RFTEIP-------------EAIY 517

Query: 493 DILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPEL 540
           D++ L+ L   D   N + +I     + L  L  L+LS+NNI+ +PPEL
Sbjct: 518 DVISLESLIAND---NVIAAIDVSALEKLKKLAVLNLSNNNIAHVPPEL 563



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 163/316 (51%), Gaps = 25/316 (7%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L+KL L +N IE + E++  L  L V ++SHN +S +P  IG L  LK   +  N+I
Sbjct: 290 AGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNI 349

Query: 104 MKIPDEI---GSATALVKF----DCSSNQLKEL-PSSLG---RCL-------NLSDFKAS 145
             I  +I   G+   L       D +S   +EL  SS+    RC        N      +
Sbjct: 350 KNIRADIIRCGTPRILTHIRQITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLA 409

Query: 146 NNCITSLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +  LPE++   A  + ++ +D+  NKL+ LS+ +    +++ +L  + N L  +PE 
Sbjct: 410 GQNLLDLPEEVLENAVEASVTTIDLSRNKLSELSDKMSIVISVM-DLKLTSNHLTHLPEW 468

Query: 203 IGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           IG   + ++ LD+ +N + S+P SIS    L +  +  N  + +P  +  +  L +L  +
Sbjct: 469 IGEKYKYLQILDISKNYLKSLPLSISCLKYLRDVDLSFNRFTEIPEAIYDVISLESLIAN 528

Query: 262 SNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            N +    V A +   +L+VL+LSNN+++ +PPE+G +  LR L L+GN  +  R +++ 
Sbjct: 529 DNVIAAIDVSALEKLKKLAVLNLSNNNIAHVPPELGNLKNLRNLSLSGNCFKYPRQAILM 588

Query: 320 GPTPALLKYLRSRLPE 335
             T  +L YLR+ +P+
Sbjct: 589 KETEEILSYLRNLIPQ 604



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 214/481 (44%), Gaps = 100/481 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS+  L ++P + Y                +L +L L +N++  L+ ++ NL +LT +
Sbjct: 136 INLSDNKLENLPPQFYM-------------LEELHELYLKNNHLNMLESEIGNLIMLTCM 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L++LP  +G L  L +L++S+N I ++P ++ S  +L   D S NQL+ LP  L
Sbjct: 183 DLSYNNLNKLPIGMGYLVRLVTLNLSYNMIKELPPDMTSMRSLRILDVSFNQLEVLPP-L 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G           +N +   P D++ CS ++ L ++ N +  + +  + +   L +L    
Sbjct: 242 GELRKAEKIMFQSNNLKKFP-DISGCSALTVLHLDNNNIPEIDSQCLETAGHLKKLTLQN 300

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ-----------------------NRILSIPSSISGC- 229
           N +  +PE I  L  L   DL                         N I +I + I  C 
Sbjct: 301 NKIEVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNIKNIRADIIRCG 360

Query: 230 --------------------------------CSLAEFYMGNNALSAL--------PAEL 249
                                           C   ++ M N  L +L        P E+
Sbjct: 361 TPRILTHIRQITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLAGQNLLDLPEEV 420

Query: 250 ---GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL--SNNSLSGLPPEIG-KMTTLRKL 303
                 + + T+DL  N+L E   +   + +SV+DL  ++N L+ LP  IG K   L+ L
Sbjct: 421 LENAVEASVTTIDLSRNKLSELS-DKMSIVISVMDLKLTSNHLTHLPEWIGEKYKYLQIL 479

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKEL 362
            ++ N L++L  S+      + LKYLR   L  N  +E      D+I++    S+ + + 
Sbjct: 480 DISKNYLKSLPLSI------SCLKYLRDVDLSFNRFTEIPEAIYDVISLE---SLIANDN 530

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +  +++SA+     +  ++  L+LS N+I  +PPEL +  +L+ L LS N  K    AI
Sbjct: 531 VIAAIDVSALE----KLKKLAVLNLSNNNIAHVPPELGNLKNLRNLSLSGNCFKYPRQAI 586

Query: 423 L 423
           L
Sbjct: 587 L 587



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 40/266 (15%)

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +L +++LS+N L  LPP+   +  L +L L  N L  L S + N                
Sbjct: 132 KLKIINLSDNKLENLPPQFYMLEELHELYLKNNHLNMLESEIGN---------------- 175

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                       LI +          + L   NL+ +P  +     +  L+LS N I+EL
Sbjct: 176 ------------LIMLTC--------MDLSYNNLNKLPIGMGYLVRLVTLNLSYNMIKEL 215

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           PP+++S  SL+ L +S N+++  P   L  L     +   +N L++ P         L +
Sbjct: 216 PPDMTSMRSLRILDVSFNQLEVLPP--LGELRKAEKIMFQSNNLKKFPD--ISGCSALTV 271

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           L L  N     ++    +  HL++L L+  ++   P +I++L  L + DLS N++  IP 
Sbjct: 272 LHLDNNNIPEIDSQCLETAGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPF 331

Query: 516 GFKNLTSLTELDLSDNNISALPPELV 541
               L +L +  +  NNI  +  +++
Sbjct: 332 CIGILPNLKQFVIKGNNIKNIRADII 357



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS-----CASLQTLILSRNKI 415
           +L+L    LS +P ++W   E+T+ +L R+   EL  E           L+TL LS N +
Sbjct: 39  QLNLSSKGLSTVPDQVWNINELTEEEL-RDLHFELDYEHKEERWWEQEPLKTLDLSSNSL 97

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
               D I       +    +N      P  G   +  L+I++LS N + +LP  P F  L
Sbjct: 98  ITIDDKIQFLTELSNLNLQNNLLEELPPEVG--SLHKLKIINLSDNKLENLP--PQFYML 153

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L ELYL+   L    ++I  L  L  +DLS N+L  +P G   L  L  L+LS N I 
Sbjct: 154 EELHELYLKNNHLNMLESEIGNLIMLTCMDLSYNNLNKLPIGMGYLVRLVTLNLSYNMIK 213

Query: 535 ALPPELVSV 543
            LPP++ S+
Sbjct: 214 ELPPDMTSM 222


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 237/495 (47%), Gaps = 47/495 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T LN+S N+L+ LP  +GE+  L+ L +  N   ++P ++     LV+   + N L  L
Sbjct: 49  VTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTL 108

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA-------- 181
           P    R   L+      N  T+LPE +   S +++L ++ N+L  L ++L A        
Sbjct: 109 PEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGAPSLHTLVL 168

Query: 182 ---------SWTMLTE----LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                     W   T+    L A  N+L  +P +IG+L RL  L L  NR+  +P+SI  
Sbjct: 169 DGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGD 228

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             SL + Y+  N L  LPA +G LS+L TL L  N L+E       L RL+ L+L++N L
Sbjct: 229 MASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWL 288

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + +P  IG++ +L KL LT N L  L  SL        L   R+ L +  DS       D
Sbjct: 289 THVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLD 348

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            + +A                L+++PS +     +T L L+   ++ LP  L     L+T
Sbjct: 349 TLNLAQN-------------PLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLET 395

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ---ILDLSYN-IA 463
           L L  N ++D P   L+ L +L+ L L +N L  VP    + + +L+    LDL+ N ++
Sbjct: 396 LDLVGNNLRDLP-FQLSGLGALTTLNLASNQLSWVP----RTLGLLRNLVNLDLADNELS 450

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           SLP       L  L++L +   QL   P  +  L +L  L L  N L  +P       +L
Sbjct: 451 SLPRA--LGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTSNWQKLTL 508

Query: 524 TELDLSDNN-ISALP 537
            ELDLSDN  +SA+P
Sbjct: 509 KELDLSDNPLLSAVP 523



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 148/470 (31%), Positives = 224/470 (47%), Gaps = 47/470 (10%)

Query: 73  LNVSHNKLSELPAAIG---ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L++S+  L+ LPA  G   EL  +  L++S N +  +P+ +G  T L +    SN   EL
Sbjct: 26  LDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGEL 85

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +     L +   + N +T+LPE+ A   +++ L ++ N  T L   ++   + LT+L
Sbjct: 86  PPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPE-VVGHLSSLTQL 144

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              KN L G+P+++G+ S L  L L  N +  +P  I    SL      +N L+ LP  +
Sbjct: 145 YLQKNQLPGLPDSLGAPS-LHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSI 203

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           G L                      +RL  L L+ N L  LP  IG M +L KL L  N 
Sbjct: 204 GAL----------------------IRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQ 241

Query: 310 LRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           L+TL +S+ N      L  L++  L  N   E   +  DL    +RL+    EL+L    
Sbjct: 242 LQTLPASIGN------LSELQTLALSGNHLEELPASVADL----SRLT----ELNLADNW 287

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     + KL L+ N + ELPP L +   L  L +SRN + D PD+    L++
Sbjct: 288 LTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDS-FDGLAN 346

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  NPL  +PS     +  L  L L+Y ++ +LP       L  L+ L L    L
Sbjct: 347 LDTLNLAQNPLTSLPSS-VGALKRLTWLSLAYCDLETLPAG--LGGLHRLETLDLVGNNL 403

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           R+ P  +  L  L  L+L+ N L  +P     L +L  LDL+DN +S+LP
Sbjct: 404 RDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLP 453



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 38/379 (10%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L  L+L  N++ +L + + +   L  L+   N L+ELP +IG L  L+ L ++ N +
Sbjct: 160 APSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRL 219

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            K+P  IG   +L K     NQL+ LP+S+G    L     S N +  LP  +AD S+++
Sbjct: 220 RKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLT 279

Query: 164 KLDVEGN----------------KLTVLSNNL------IASWTMLTELIASKNLLNGMPE 201
           +L++  N                KL++  N L      + +  +LT L  S+N L+ +P+
Sbjct: 280 ELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPD 339

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           +   L+ L  L+L QN + S+PSS+     L    +    L  LPA LG L +L TLDL 
Sbjct: 340 SFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLV 399

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N L++   +   L  L+ L+L++N LS +P  +G +  L  L L  N L +L  +L   
Sbjct: 400 GNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGG- 458

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ LR   + EN+ +    +  DL  + T        L L G  L+ +P+  W+ 
Sbjct: 459 -----LESLRKLDVAENQLTWIPRSVCDLPKLET--------LVLRGNRLADLPTSNWQK 505

Query: 380 GEITKLDLSRNSIQELPPE 398
             + +LDLS N +    PE
Sbjct: 506 LTLKELDLSDNPLLSAVPE 524



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 192/425 (45%), Gaps = 43/425 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L + L   P L  L +  N L+ELP  IG+   L +L    N + ++
Sbjct: 141 LTQLYLQKNQLPGLPDSL-GAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTEL 199

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG+   L +   + N+L++LP+S+G   +L+      N + +LP  + + S++  L 
Sbjct: 200 PPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLA 259

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN L  L  + +A  + LTEL  + N L  +PE IG L+ L +L L  NR+  +P S+
Sbjct: 260 LSGNHLEELPAS-VADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSL 318

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L    +  N+L  LP     L+ L TL+L  N L         L RL+ L L+  
Sbjct: 319 GALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYC 378

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  +G +  L  L L GN LR L   L                            
Sbjct: 379 DLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSG-------------------------- 412

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              +   T L++ S +LS        +P  +     +  LDL+ N +  LP  L    SL
Sbjct: 413 ---LGALTTLNLASNQLSW-------VPRTLGLLRNLVNLDLADNELSSLPRALGGLESL 462

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IA 463
           + L ++ N++  W    +  L  L  L L  N L  +P+  ++ +  L+ LDLS N  ++
Sbjct: 463 RKLDVAENQLT-WIPRSVCDLPKLETLVLRGNRLADLPTSNWQKL-TLKELDLSDNPLLS 520

Query: 464 SLPEN 468
           ++PEN
Sbjct: 521 AVPEN 525



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 150/349 (42%), Gaps = 67/349 (19%)

Query: 196 LNGMPETIGSLSRL---IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           L G+P   G L  L     L+L  NR+ ++P ++     L   ++ +N    LP ++  L
Sbjct: 33  LTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALL 92

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L  N L     E  +L RL+ L L  N+ + LP  +G +++L +L L  N L 
Sbjct: 93  GGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLP 152

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  SL     P+L                                    L L+G +L+ 
Sbjct: 153 GLPDSLG---APSL----------------------------------HTLVLDGNHLAE 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I +   +  L    N + ELPP + +   LQ L L+ N+++  P +I   ++SL+ 
Sbjct: 176 LPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSI-GDMASLTK 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L  N L+ +P+    ++  LQ L LS N              HL+EL          P
Sbjct: 235 LYLQKNQLQTLPAS-IGNLSELQTLALSGN--------------HLEEL----------P 269

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             +  L +L  L+L+ N L  +PE    L SL +L L+ N ++ LPP L
Sbjct: 270 ASVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSL 318



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L   +LRD+P      F  +G G        L  L LA N +  +   L  L  L  
Sbjct: 395 TLDLVGNNLRDLP------FQLSGLGA-------LTTLNLASNQLSWVPRTLGLLRNLVN 441

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+LS LP A+G L  L+ LDV+ N +  IP  +     L       N+L +LP+S
Sbjct: 442 LDLADNELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTS 501

Query: 133 LGRCLNLSDFKASNN-CITSLPEDLADCSKMS 163
             + L L +   S+N  ++++PE+  D   M+
Sbjct: 502 NWQKLTLKELDLSDNPLLSAVPENW-DVGTMA 532


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 214/436 (49%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LSSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS   +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 220/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++   + L  L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G   ++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N +  L     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 208/435 (47%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LPE++  C +++ 
Sbjct: 206 TVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPETIGNLSSLSRLGLRYNRLSAIPK 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C  L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  I    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 44/275 (16%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           C E   +RL   DLS  S+  LP  I ++T L +L L  N L++L         PA +  
Sbjct: 97  CREENSMRL---DLSKRSIHMLPSAIKELTQLTELYLYSNKLQSL---------PAEVGC 144

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                 +L+T+A           L   +L+++P  +    ++  LDL 
Sbjct: 145 LV----------------NLMTLA-----------LSENSLTSLPDSLDNLKKLRMLDLR 177

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++E+P  +   +SL TL L  N+I      I  +LS L+ L +  N ++Q+P++   
Sbjct: 178 HNKLREIPSVVYRLSSLATLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQLPAE-IG 235

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           ++  L  LD+++N +  LPE     S   +  L L+  +L + P  I  L  L  L L  
Sbjct: 236 ELCNLITLDVAHNQLEHLPEE--IGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           N L +IP+     + L EL+L +NNISALP  L+S
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISALPEGLLS 328



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 200/416 (48%), Gaps = 21/416 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  + Y +  EA +       +D++ LIL+   ++ L + +  L  L +L++S N+L  
Sbjct: 31  EVEPKTYMDLTEAFQN-----PLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLII 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  I +L  L+ LD+  N ++ +P EI     L   D  SNQL  LP  +G+  NL + 
Sbjct: 86  LPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T+ P+++    K+  L++  N++  +    I     L  L    N L  +P+ 
Sbjct: 146 YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L +L  L+L  N+I ++P  I     L   Y+  N L+ LP E+ KL KL +L L +
Sbjct: 205 IGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDN 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL+ L VL L+NN L+ +P EIG +  L+ L L  N L T+   +    
Sbjct: 265 NQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 324

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
              +L      L  N+ +        L  + T        L L    L+ IP EI +   
Sbjct: 325 NLQMLD-----LGNNQLTILPKEIGKLQNLQT--------LYLSNNQLTTIPKEIGQLQN 371

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           + +L LS N +  +P E+    +LQ L LS N++   P  I   L +L  L L NN
Sbjct: 372 LQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEI-GQLQNLQTLYLRNN 426



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 195/422 (46%), Gaps = 66/422 (15%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S  +LK LP  +G+  NL     S+N +  LP+++     +  LD+  N+L +L     
Sbjct: 55  LSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIIL----- 109

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                              P+ I  L  L  LDL  N++  +P  I    +L E Y+ NN
Sbjct: 110 -------------------PKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 150

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L L NN L+ LP EIGK+  
Sbjct: 151 QLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQK 210

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L+ N ++TL         P  ++ L+                             
Sbjct: 211 LQWLNLSYNQIKTL---------PQEIEKLQKL--------------------------- 234

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L    L+ +P EI +  ++  L L  N +  LP E+    +L+ L L+ N++   P
Sbjct: 235 QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIP 294

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L +L  L L +N L  +P +    +  LQ+LDL  N +  LP+      L +LQ
Sbjct: 295 QEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGNNQLTILPKE--IGKLQNLQ 350

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LYL   QL   P +I +LQ L+ L LS N L +IP+    L +L EL LS+N +  +P 
Sbjct: 351 TLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPK 410

Query: 539 EL 540
           E+
Sbjct: 411 EI 412



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 172/354 (48%), Gaps = 42/354 (11%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ IG L  L  LDL  N+++ +P  I    +L    + +N L  LP E
Sbjct: 53  LILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKE 112

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           + +L  L  LDL SNQL     E  +L+ L  L LSNN L+  P EIGK+  L+ L L+ 
Sbjct: 113 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSA 172

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N ++T+   +       L K     LP N+                              
Sbjct: 173 NQIKTIPKEI-----EKLQKLQSLYLPNNQ------------------------------ 197

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +  ++  L+LS N I+ LP E+     LQ L L +N++   P  I   L 
Sbjct: 198 -LTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQ 255

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
            L  L LDNN L  +P +    +  L++L L+ N + ++P+      L +LQ+LYL   Q
Sbjct: 256 KLESLGLDNNQLTTLPQE-IGQLQNLKVLFLNNNQLTTIPQE--IGHLQNLQDLYLVSNQ 312

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +LQ L++LDL  N L  +P+    L +L  L LS+N ++ +P E+
Sbjct: 313 LTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEI 366



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 127/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 190 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 236

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 237 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 296

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L  L  S
Sbjct: 297 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQTLYLS 355

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 356 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 415

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 416 QNLQTLYLRNNQF 428



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 283 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 329

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L++L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 330 DLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 389

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 390 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 430


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 243/502 (48%), Gaps = 52/502 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTV-------LNVSHNKLSELPAAIGELHMLKSLDVS 99
           L+ LIL   N E  + +L+ LP  T        L    N L  +P  I +   LK L++S
Sbjct: 41  LETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLS 100

Query: 100 FNSIMKIPDEIGSATALVKFDCSSN-QLKELPSSLGRCLNLSDFK-ASNNCITSLPEDLA 157
           FN I +IP+ + +   L + D S+N Q+KE+P SL   +NL     ++N+ I  +P+ LA
Sbjct: 101 FNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLA 160

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +L + GN +  +   ++ +   L +L  +   +  +P+++ +L  L +L L+ N
Sbjct: 161 ALVNLQQLQLGGNPIKEIPY-VLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNN 219

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           +I  IP S++   +L    +  N +  +P  L KL+ L  LDL+ NQ+ E       L+ 
Sbjct: 220 QIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKN 279

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LDL +N +  +P   GK+ +L++L L  N ++ +  S   G   +L           
Sbjct: 280 LQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSF--GKLASL----------- 326

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                  ++L+L    +  IP        + +L L  N I+E+P
Sbjct: 327 -----------------------QQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVP 363

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             L++  +LQ L  S N+IK+ PD+ L +L +L  L + +N ++++P D    +  LQ L
Sbjct: 364 DSLATLVNLQQLGFSSNQIKEIPDS-LATLVNLQQLDISSNQIKEIP-DSLAALTHLQNL 421

Query: 457 DLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            LS     + E P F S+L +LQ+L L   Q+++ P   ++L  L+ L L  N +  IP 
Sbjct: 422 GLSS--TQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPS 479

Query: 516 GFKNLTSLTELDLSDNNISALP 537
             +NL +L +LDL  N I   P
Sbjct: 480 FLENLPALQKLDLRLNPIPVSP 501



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 207/446 (46%), Gaps = 52/446 (11%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-------KASNNCITSLPEDLADCSK 161
           E  +A    + D S   L  LP ++G+   L          +A  N + +LP +     K
Sbjct: 11  EQAAAEEWTELDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQK 70

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RIL 220
           + +L+   N L  +   +I  +  L +L  S N +  +PE++ +L  L +LDL  N +I 
Sbjct: 71  LKRLEWPCNNLEAIPV-IITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIK 129

Query: 221 SIPSSISGCCSLAEFYM-GNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLS 278
            IP S+S   +L +  +  N+ +  +P  L  L  L  L L  N +KE   V    + L 
Sbjct: 130 EIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQ 189

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L++  +  +P  +  +  L++L L  N ++ +  SL      A L  L+        
Sbjct: 190 QLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSL------AALSNLQ-------- 235

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                  L L    +  IP  + +   + +LDL+ N I E+P  
Sbjct: 236 ----------------------RLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDS 273

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
            ++  +LQ L L  N+IK  PD+    L+SL  L L +N ++++P D F  +  LQ L+L
Sbjct: 274 FATLKNLQKLDLGSNQIKKIPDS-FGKLASLQQLNLGSNQIKKIP-DSFGKLASLQQLNL 331

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           S+N I  +P++  F++L +LQ+LYL    ++E P  +  L  L+ L  S N ++ IP+  
Sbjct: 332 SHNKIEEIPDS--FATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSL 389

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L +L +LD+S N I  +P  L ++
Sbjct: 390 ATLVNLQQLDISSNQIKEIPDSLAAL 415



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 194/418 (46%), Gaps = 62/418 (14%)

Query: 45  VDLQKLILAHNN-IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           ++LQ+L L+ N+ I+++ + L  L  L  L +  N + E+P  +  L  L+ L ++   I
Sbjct: 139 INLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGI 198

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +IPD + +   L +    +NQ+KE+P SL    NL   + + N I  +P+ LA  + + 
Sbjct: 199 KEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQ 258

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LD+  N+++                         +P++  +L  L +LDL  N+I  IP
Sbjct: 259 QLDLNINQIS------------------------EIPDSFATLKNLQKLDLGSNQIKKIP 294

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
            S     SL +  +G+N +  +P   GKL+ L  L+L  N+++E                
Sbjct: 295 DSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEE---------------- 338

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
                 +P     +  L++L L  NP++ +  SL        L +  +++ E  DS A+ 
Sbjct: 339 ------IPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATL 392

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                        V  ++L +    +  IP  +     +  L LS   I E+P  LS+  
Sbjct: 393 -------------VNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLV 439

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
           +LQ L LS N+IK  PD+ +  L+SL  L L +N + ++PS   +++P LQ LDL  N
Sbjct: 440 NLQQLNLSFNQIKKIPDSFV-KLASLQALYLCSNQITKIPS-FLENLPALQKLDLRLN 495



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N I+K+ + L  L  L  L+++ N++SE+P +   L  L+ LD+  N I K
Sbjct: 233 NLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKK 292

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD  G   +L + +  SNQ+K++P S G+  +L     S+N I  +P+  A    + +L
Sbjct: 293 IPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQL 352

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N +  + ++L A+   L +L  S N +  +P+++ +L  L +LD+  N+I  IP S
Sbjct: 353 YLYNNPIKEVPDSL-ATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDS 411

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++    L    + +  ++ +P  L  L  L  L+L  NQ+K+      +L  L  L L +
Sbjct: 412 LAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCS 471

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N ++ +P  +  +  L+KL L  NP+
Sbjct: 472 NQITKIPSFLENLPALQKLDLRLNPI 497



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 24/225 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   LQ+L L  N I+K+ +    L  L  LN+SHNK+ E+P +   L  L+ L +
Sbjct: 295 DSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYL 354

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N I ++PD + +   L +   SSNQ+KE+P SL   +NL     S+N I  +P+ LA 
Sbjct: 355 YNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAA 414

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +               NL  S T +TE+          P+ + +L  L +L+L  N+
Sbjct: 415 LTHLQ--------------NLGLSSTQITEI----------PDFLSTLVNLQQLNLSFNQ 450

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           I  IP S     SL   Y+ +N ++ +P+ L  L  L  LDL  N
Sbjct: 451 IKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLN 495



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 73/130 (56%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ+L  + N I+++ + L  L  L  L++S N++ E+P ++  L  L++L +S   I 
Sbjct: 370 VNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQIT 429

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IPD + +   L + + S NQ+K++P S  +  +L      +N IT +P  L +   + K
Sbjct: 430 EIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQK 489

Query: 165 LDVEGNKLTV 174
           LD+  N + V
Sbjct: 490 LDLRLNPIPV 499


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 178/367 (48%), Gaps = 16/367 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ LD+S N ++ +P EI     L   D  SNQL  LP 
Sbjct: 51  VLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPK 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   SNN +T+ P+++    K+  L++  N++  +    I     L  L  
Sbjct: 111 EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKE-IEKLQKLQSLYL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L +L  L L  N+I ++P  I     L   Y+  N L+ LP E+ K
Sbjct: 170 PNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEK 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L L +NQL     E  QL+ L VL L+NN L+ +P EIG +  L+ L L  N L
Sbjct: 230 LQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQL 289

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T+   +       +L    ++L         T     I     L    +EL L    L+
Sbjct: 290 TTIPKEIGQLQNLQMLDLGNNQL---------TILPKEIGKLQNL----QELYLSNNQLT 336

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            IP EI +   + +L LS N +  +P E+    +LQ L LS N++   P  I   L +L 
Sbjct: 337 TIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEI-GQLQNLQ 395

Query: 431 CLKLDNN 437
            L L NN
Sbjct: 396 TLYLRNN 402



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 189/403 (46%), Gaps = 51/403 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +P ++              +  +LQ L L+ N +  L +++R L  L +L
Sbjct: 52  LDLSEQKLKALPKKI-------------GQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 98

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  IG+L  L+ L +S N +   P EIG    L   + S+NQ+K +P  +
Sbjct: 99  DLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 158

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L      NN +T+LP+++    K+  L +  N++  L    I     L  L   K
Sbjct: 159 EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQE-IEKLQKLQWLYLHK 217

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ I  L +L  L L  N++ ++P  I    +L   ++ NN L+ +P E+G L 
Sbjct: 218 NQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 277

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L SNQL     E  QL+ L +LDL NN L+ LP EIGK+  L++L L+ N L T
Sbjct: 278 NLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTT 337

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   +  G    L                                  +EL L    L+ I
Sbjct: 338 IPKEI--GQLQNL----------------------------------QELYLSNNQLTTI 361

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           P EI +   + +L LS N +  +P E+    +LQTL L  N+ 
Sbjct: 362 PKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 404



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 189/408 (46%), Gaps = 71/408 (17%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+ +     +  LD+  N+L +L                   
Sbjct: 50  RVLDLSEQK-----LKALPKKIGQLKNLQMLDLSDNQLIIL------------------- 85

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ I  L  L  LDL  N++  +P  I    +L E Y+ NN L+  P E+GKL K
Sbjct: 86  -----PKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQK 140

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L +NQ+K    E  +L +L  L L NN L+ LP EIGK+  L+ L L+ N ++TL
Sbjct: 141 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTL 200

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  ++ L+                             + L L    L+ +P
Sbjct: 201 ---------PQEIEKLQKL---------------------------QWLYLHKNQLTTLP 224

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +  ++  L L  N +  LP E+    +L+ L L+ N++   P  I   L +L  L 
Sbjct: 225 QEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDLY 283

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L +N L  +P +    +  LQ+LDL  N +  LP+      L +LQELYL   QL   P 
Sbjct: 284 LVSNQLTTIPKE-IGQLQNLQMLDLGNNQLTILPKE--IGKLQNLQELYLSNNQLTTIPK 340

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I +LQ L+ L LS N L +IP+    L +L EL LS+N +  +P E+
Sbjct: 341 EIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEI 388



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 166 SLYLPNNQLTTLPQEI-------GKLQK------LQWLYLSYNQIKTLPQEIEKLQKLQW 212

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 213 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 272

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 273 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 331

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 332 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 391

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 392 QNLQTLYLRNNQF 404



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 259 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 305

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 306 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 365

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 366 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 406



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 5/151 (3%)

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
           + Q+L   L +   ++ L LS  K+K  P  I   L +L  L L +N L  +P +  + +
Sbjct: 35  TYQDLTKALQNPLDVRVLDLSEQKLKALPKKI-GQLKNLQMLDLSDNQLIILPKE-IRQL 92

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ+LDL  N +  LP+      L +LQELYL   QL   P +I +LQ+L+ L+LS N 
Sbjct: 93  KNLQMLDLRSNQLTILPKE--IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 150

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +++IP+  + L  L  L L +N ++ LP E+
Sbjct: 151 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 181


>gi|195061568|ref|XP_001996020.1| GH14049 [Drosophila grimshawi]
 gi|193891812|gb|EDV90678.1| GH14049 [Drosophila grimshawi]
          Length = 744

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 253/544 (46%), Gaps = 78/544 (14%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL----------------------- 73
           E D WW  V +  L L+ N +  +   + NL  LTVL                       
Sbjct: 203 EEDAWWNQVPINNLDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEIGKLEKLVRL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+SHNKLSELPA    L  L+ L++S N  +++  +I +   L   D  +N +  +P  +
Sbjct: 263 NLSHNKLSELPAEFYSLPELRHLNISHNEFLELNPDISNLHMLEFLDAGNNNINTVPGGI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+    +NN I  LP D+ +   + KLD+       + N+LIA            
Sbjct: 323 GFLVRLTALLLANNHIKELPTDIVNMRSLQKLDL-------MKNDLIA------------ 363

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKL 252
                +PE +G + +L  L +  N I  +P+   G   L+E +  NN + ++P +L   L
Sbjct: 364 -----LPEDMGLMRKLECLYVQHNDIKELPT-FEGNEMLSELHASNNFIESVPQDLCANL 417

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L   DL  N++ +   E C +R L+ LDL+NNS+S LP  +  +  L  L + GNP++
Sbjct: 418 PHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIK 477

Query: 312 TLRSSLVNGPTPALLKYLRSRLPE------NEDSEA------STTKEDLIT-----MATR 354
           T+R  ++   T  +LK L  R           D EA      ST  +  +      M  R
Sbjct: 478 TIRRDILQCGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQGAMNNLPNNMTDR 537

Query: 355 LSV-TSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQT-LI 409
             +  ++ L++   NL+ +P  +++   +  +  +D +RN +  LP  L   ++L T L+
Sbjct: 538 YKLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQGLQLMSNLVTELV 597

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           L+ N I   P   +T  + ++ L L NN +R +P++ F  +  L+ L+++ N    LP+ 
Sbjct: 598 LAHNVIASVP-TFITQFTRITFLNLSNNQIRDLPNE-FGVLNTLRELNIANNRFEFLPKG 655

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                L  L+ L      ++    D L+ + +L  LDL  N ++ IP    NLT++T L+
Sbjct: 656 --LYELQGLEILIASENHIKALNVDGLKGMPRLSTLDLRNNDIEFIPPILGNLTNITHLE 713

Query: 528 LSDN 531
           L  N
Sbjct: 714 LVGN 717



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 151/340 (44%), Gaps = 36/340 (10%)

Query: 31  NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           NF E+   D       L+   L  N I +L +++  +  L  L++++N +S LP  +  L
Sbjct: 404 NFIESVPQDLCANLPHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSL 463

Query: 91  HMLKSLDVSFNSIMKIPDEI---GSATALVKFD------------------CSS------ 123
             L SL V  N I  I  +I   G+A  L                      CSS      
Sbjct: 464 AHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGS 523

Query: 124 -NQLKELPSSLGRCLNLSDFK--ASN-NCITSLPE---DLADCSKMSKLDVEGNKLTVLS 176
              +  LP+++     L   +  A N   +T++PE    LA    +  +D   N+L  L 
Sbjct: 524 QGAMNNLPNNMTDRYKLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLP 583

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
             L     ++TEL+ + N++  +P  I   +R+  L+L  N+I  +P+      +L E  
Sbjct: 584 QGLQLMSNLVTELVLAHNVIASVPTFITQFTRITFLNLSNNQIRDLPNEFGVLNTLRELN 643

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEI 294
           + NN    LP  L +L  L  L    N +K   V+  +   RLS LDL NN +  +PP +
Sbjct: 644 IANNRFEFLPKGLYELQGLEILIASENHIKALNVDGLKGMPRLSTLDLRNNDIEFIPPIL 703

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 704 GNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 743



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 202/510 (39%), Gaps = 132/510 (25%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L ++P E Y                +L+ L ++HN   +L  D+ NL +L  L
Sbjct: 262 LNLSHNKLSELPAEFYS-------------LPELRHLNISHNEFLELNPDISNLHMLEFL 308

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  +N ++ +P  IG L  L +L ++ N I ++P +I +  +L K D   N L  LP  +
Sbjct: 309 DAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNMRSLQKLDLMKNDLIALPEDM 368

Query: 134 G-----RCLN-----------------LSDFKASNNCITSLPEDL-ADCSKMSKLDVEGN 170
           G      CL                  LS+  ASNN I S+P+DL A+   +   D+  N
Sbjct: 369 GLMRKLECLYVQHNDIKELPTFEGNEMLSELHASNNFIESVPQDLCANLPHLKIFDLRDN 428

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC- 229
           K+T L +  I     L  L  + N ++ +P T+ SL+ LI L +  N I +I   I  C 
Sbjct: 429 KITQLPDE-ICLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQCG 487

Query: 230 ---------------------------CSLAEFYMGNNALSALPAELG---KLSKLGTLD 259
                                      CS         A++ LP  +    KL    TL 
Sbjct: 488 TARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQGAMNNLPNNMTDRYKLRHTRTLA 547

Query: 260 LHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTL-RKLLLTGNPLRTLR 314
           ++   L        QL     + V+D + N L  LP  +  M+ L  +L+L  N + ++ 
Sbjct: 548 VNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQGLQLMSNLVTELVLAHNVIASV- 606

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                 PT                          IT  TR++     L+L    +  +P+
Sbjct: 607 ------PT-------------------------FITQFTRITF----LNLSNNQIRDLPN 631

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK------------------ 416
           E      + +L+++ N  + LP  L     L+ LI S N IK                  
Sbjct: 632 EFGVLNTLRELNIANNRFEFLPKGLYELQGLEILIASENHIKALNVDGLKGMPRLSTLDL 691

Query: 417 -----DWPDAILTSLSSLSCLKLDNNPLRQ 441
                ++   IL +L++++ L+L  NP RQ
Sbjct: 692 RNNDIEFIPPILGNLTNITHLELVGNPFRQ 721



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 19/284 (6%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +  LDL SN L     +   L  L+VL L +N+L  LPPEIGK+  L +L L+ N L  L
Sbjct: 213 INNLDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEIGKLEKLVRLNLSHNKLSEL 272

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            +   + P    L++L   +  NE  E +    +L  +        + L     N++ +P
Sbjct: 273 PAEFYSLPE---LRHLN--ISHNEFLELNPDISNLHML--------EFLDAGNNNINTVP 319

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I     +T L L+ N I+ELP ++ +  SLQ L L +N +   P+  +  +  L CL 
Sbjct: 320 GGIGFLVRLTALLLANNHIKELPTDIVNMRSLQKLDLMKNDLIALPED-MGLMRKLECLY 378

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           + +N ++++P+  F+   ML  L  S N I S+P++   ++LPHL+   LR  ++ + P 
Sbjct: 379 VQHNDIKELPT--FEGNEMLSELHASNNFIESVPQDL-CANLPHLKIFDLRDNKITQLPD 435

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           +I  ++ L  LDL+ NS+  +P    +L  L  L +  N I  +
Sbjct: 436 EICLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIKTI 479



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 196/452 (43%), Gaps = 87/452 (19%)

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASW---TMLTELIASKNLLNGMPETIGSLSR 208
           +PE L D ++ +  D +   L  LS N   +W     +  L  S N L  +   I +L  
Sbjct: 177 IPERLYDINE-ADADSKRADLVKLSINEEDAWWNQVPINNLDLSSNALTHISPKIENLLT 235

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L LH N ++S+P  I     L    + +N LS LPAE   L +L  L++  N+  E 
Sbjct: 236 LTVLQLHDNALVSLPPEIGKLEKLVRLNLSHNKLSELPAEFYSLPELRHLNISHNEFLEL 295

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +   L  L  LD  NN+++ +P  IG +  L  LLL  N ++ L + +VN        
Sbjct: 296 NPDISNLHMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVN-------- 347

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--LSLEGMNLSAIPSEIWEAGE-ITK 384
            +RS        +    K DLI +   + +  K   L ++  ++  +P+  +E  E +++
Sbjct: 348 -MRSL------QKLDLMKNDLIALPEDMGLMRKLECLYVQHNDIKELPT--FEGNEMLSE 398

Query: 385 LDLSRNSIQELPPELSSCAS---LQTLILSRNKIKDWPDAI------------------- 422
           L  S N I+ +P +L  CA+   L+   L  NKI   PD I                   
Sbjct: 399 LHASNNFIESVPQDL--CANLPHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVL 456

Query: 423 ---LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP--------ENPPF 471
              L+SL+ L  L++D NP++ +  D  +     +IL   ++ A           E  P 
Sbjct: 457 PVTLSSLAHLISLQVDGNPIKTIRRDILQ-CGTARILKTLHDRAQAKIREEGGADEEAPC 515

Query: 472 SS----------------------LPHLQELYLRRMQLREAPTDILRL---QQLRILDLS 506
           SS                      L H + L +    L   P  + +L   + + ++D +
Sbjct: 516 SSRSSTGSQGAMNNLPNNMTDRYKLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFA 575

Query: 507 QNSLQSIPEGFKNLTSL-TELDLSDNNISALP 537
           +N L S+P+G + +++L TEL L+ N I+++P
Sbjct: 576 RNQLGSLPQGLQLMSNLVTELVLAHNVIASVP 607



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    I  LDLS N++  + P++ +  +L  L L  N +   P  I   L  L  L L +
Sbjct: 208 WNQVPINNLDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEI-GKLEKLVRLNLSH 266

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L ++P++                         F SLP L+ L +   +  E   DI  
Sbjct: 267 NKLSELPAE-------------------------FYSLPELRHLNISHNEFLELNPDISN 301

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   N++ ++P G   L  LT L L++N+I  LP ++V++
Sbjct: 302 LHMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNM 348


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 189/383 (49%), Gaps = 40/383 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N++ +L  ++ NL  LT LNVS N +  LP  IG L  LK LD+S N +M++  E G
Sbjct: 74  ISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFG 133

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             ++L + + SSN LK LP   G   NL D    +N I SLP       +++ L + GN+
Sbjct: 134 QLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNE 193

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  ++++ I     L  L A KN +  +P  IG+L  L  LDL +N+I  +PS I    +
Sbjct: 194 MVTVTDS-IGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRN 252

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
           L    +  N L++LP E+GKL  L  LDL                       +N L+ LP
Sbjct: 253 LKRLDLFKNHLTSLPPEIGKLKNLKDLDLM----------------------HNDLTSLP 290

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
            E G +T L KL L  N L ++ +S++     P L  YL+S      +  +S   E    
Sbjct: 291 KEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPEL--YLQS------NQLSSLPPE---- 338

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               LS+    L L+    ++IP EIW+   + +L  + N I ELP E+     L++L L
Sbjct: 339 FGNHLSLGG--LFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDL 396

Query: 411 SRNKIKDWPDAI--LTSLSSLSC 431
             N IK  P  I  LTSLSS S 
Sbjct: 397 IGNPIKQLPPEISQLTSLSSFSF 419



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGD-----------KWWEAVDLQKLILAHNNIEKLKE 62
           LN+S+ S+R +P+E+  N  +  E D           ++ +   L++L L+ N ++ L  
Sbjct: 95  LNVSDNSIRYLPDEI-GNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPP 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +   L  L  LN+  N ++ LP    +LH L SL ++ N ++ + D IG    L      
Sbjct: 154 EFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYAL 213

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N++KELP  +G   NL       N I  LP ++ +   + +LD+  N LT L    I  
Sbjct: 214 KNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPE-IGK 272

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P+  G L+ L +L L  N + SIP+SI     + E Y+ +N L
Sbjct: 273 LKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQL 332

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           S+LP E G    LG L L  NQ      E  +L+ L  L  ++N ++ LP EIG++  LR
Sbjct: 333 SSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLR 392

Query: 302 KLLLTGNPLRTL 313
            L L GNP++ L
Sbjct: 393 SLDLIGNPIKQL 404



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 168/366 (45%), Gaps = 21/366 (5%)

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           +L  + T +T L  S N L+ +   IG+L  L  L++  N I  +P  I     L E  +
Sbjct: 61  HLFPTDTKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDL 120

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L  L  E G+LS L  L+L SN LK    E   L  L  L+L +NS++ LPP   K
Sbjct: 121 SENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEK 180

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L  L + GN + T+  S+        L  L++R+ E      +   E+L T+  R +
Sbjct: 181 LHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNL--ENLETLDLREN 238

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
                       +  +PSEI     + +LDL +N +  LPPE+    +L+ L L  N + 
Sbjct: 239 -----------QIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLT 287

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPFSSL 474
             P      L+ L  L L NN L  +P+     K IP L +   S  ++SLP  P F + 
Sbjct: 288 SLPKE-FGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQ--SNQLSSLP--PEFGNH 342

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L  L+L + Q    P +I +LQ L  L  + N +  +P     L  L  LDL  N I 
Sbjct: 343 LSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIK 402

Query: 535 ALPPEL 540
            LPPE+
Sbjct: 403 QLPPEI 408



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 2/245 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L +  N +  + + +  L  L  L    N++ ELP  IG L  L++LD+  N I  +
Sbjct: 184 LNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFL 243

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+   L + D   N L  LP  +G+  NL D    +N +TSLP++  D + + KL 
Sbjct: 244 PSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLS 303

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N LT +  ++I     + EL    N L+ +P   G+   L  L L QN+  SIP  I
Sbjct: 304 LQNNNLTSIPASIIR-LKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEI 362

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L      +N ++ LPAE+G+L KL +LDL  N +K+   E  QL  LS     + 
Sbjct: 363 WKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDP 422

Query: 286 SLSGL 290
           +LS L
Sbjct: 423 TLSDL 427



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 27/348 (7%)

Query: 199 MPETI--GSLSRL--IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           +P+TI  G +S    +++DL  + +   P+       +    + +N+LS L  E+G L  
Sbjct: 36  IPKTINNGRISGTSEVKIDLSDDSLHLFPTD----TKVTWLNISDNSLSELSPEIGNLKN 91

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L++  N ++    E   L +L  LDLS N L  L PE G++++L +L L+ N L+TL
Sbjct: 92  LTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTL 151

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                  P   +L+ LR     N DS +  +   +     +L+     LS+ G  +  + 
Sbjct: 152 ------PPEFGMLENLRDL---NLDSNSIASLPPVFEKLHQLN----SLSMNGNEMVTVT 198

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I    ++  L   +N I+ELPP++ +  +L+TL L  N+I+  P  I  +L +L  L 
Sbjct: 199 DSIGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEI-GNLRNLKRLD 257

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N L  +P +  K +  L+ LDL +N + SLP+   F  L  L++L L+   L   P 
Sbjct: 258 LFKNHLTSLPPEIGK-LKNLKDLDLMHNDLTSLPKE--FGDLTGLEKLSLQNNNLTSIPA 314

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            I+RL+++  L L  N L S+P  F N  SL  L L  N  +++PPE+
Sbjct: 315 SIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEI 362



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 55/366 (15%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC----CSLAEFYMGNNA 241
           +  L   ++L+NG+   IG L   I  +   +R + IP +I+       S  +  + +++
Sbjct: 1   MNHLRQVRDLVNGL-ALIGLLLVSIGCEKGPDRPVKIPKTINNGRISGTSEVKIDLSDDS 59

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L   P +    +K+  L++  N L E   E   L+ L+ L++S+NS+  LP EIG ++ L
Sbjct: 60  LHLFPTD----TKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQL 115

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           ++L L+ N L  L                        D E        ++   RL+++S 
Sbjct: 116 KELDLSENKLMRL------------------------DPEFGQ-----LSSLERLNLSSN 146

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L         +P E      +  L+L  NSI  LPP       L +L ++ N++    D
Sbjct: 147 WLK-------TLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTD 199

Query: 421 AI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           +I  L  L  L  LK   N ++++P     ++  L+ LDL  N I  LP      +L +L
Sbjct: 200 SIGGLKKLRYLYALK---NRIKELPPQ-IGNLENLETLDLRENQIEFLPSE--IGNLRNL 253

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + L L +  L   P +I +L+ L+ LDL  N L S+P+ F +LT L +L L +NN++++P
Sbjct: 254 KRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIP 313

Query: 538 PELVSV 543
             ++ +
Sbjct: 314 ASIIRL 319



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++ +   L+KL L +NN+  +   +  L  +  L +  N+LS LP   G    L  L + 
Sbjct: 292 EFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLD 351

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N    IP EI     L +   + NQ+ ELP+ +GR   L       N I  LP +++  
Sbjct: 352 QNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLPPEISQL 411

Query: 160 SKMSKLDVEGNKLTVLSN 177
           + +S    +   L+ L++
Sbjct: 412 TSLSSFSFDDPTLSDLNH 429


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 149/271 (54%), Gaps = 4/271 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L+HN +  L +++  L  L  LN++ N+L+ L   IG L  L++LD+  N +  +
Sbjct: 190 LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL 249

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG+   L   D   NQL  LP  +G   NL       N + +LPE++ +   +  LD
Sbjct: 250 PEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLD 309

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT L    I     L +L    N L  +P+ IG L +L  L L  N++ ++P  I
Sbjct: 310 LEGNQLTTLPKE-IGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G+N L+ LP E+GKL  L  LDLH NQL     E  +L+ L +LDL  N
Sbjct: 369 EDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            L  LP EIGK+  L++L L GNP  +LRS 
Sbjct: 429 QLMTLPKEIGKLQNLKELNLVGNP--SLRSQ 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/291 (37%), Positives = 150/291 (51%), Gaps = 11/291 (3%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           VY N  EA          D++ L L      N +  L +++ NL  L  LN++ N+ + L
Sbjct: 126 VYYNLTEA-----LQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTL 180

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IG L  L+ LD+S N +  +P EIG    L K + +SNQL  L   +G   NL    
Sbjct: 181 PEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLD 240

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +T+LPE++ +   +  LD+EGN+L  L    I +   L  L    N L  +PE I
Sbjct: 241 LGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEE-IGNLQNLQTLDLEGNQLATLPEEI 299

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L  L  LDL  N++ ++P  I     L + Y+ NN L+ LP E+GKL KL  L L  N
Sbjct: 300 GNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHN 359

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           QLK    E   L+ L +L L +N L+ LP E+GK+  L  L L GN L TL
Sbjct: 360 QLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTL 410



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 153/305 (50%), Gaps = 19/305 (6%)

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
           G N L+ LP E+G L  L TL+L+SNQ      E   L +L  LDLS+N L+ LP EIG+
Sbjct: 150 GGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQ 209

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+KL L  N L TL   + N      L   R++L        +T  E++  +     
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQL--------TTLPEEIGNLQNL-- 259

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              + L LEG  L+A+P EI     +  LDL  N +  LP E+ +  +LQTL L  N++ 
Sbjct: 260 ---QTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLT 316

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             P  I   L  L  L L NN L  +P +    +  LQ L L +N + +LP+      L 
Sbjct: 317 TLPKEI-GKLQKLKKLYLYNNRLTTLPKE-IGKLQKLQWLSLDHNQLKTLPKE--IEDLQ 372

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +L+ L L   QL   P ++ +LQ L +LDL  N L ++P+    L +L  LDL  N +  
Sbjct: 373 NLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMT 432

Query: 536 LPPEL 540
           LP E+
Sbjct: 433 LPKEI 437


>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
           intestinalis]
          Length = 954

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 268/561 (47%), Gaps = 45/561 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAG------------EGDKWWEAVDLQKLILA-HNNIEKL 60
           L++ N +L+ +P  VY+                  E  K    + L + I A HN IE L
Sbjct: 155 LDVGNNALKSLPKSVYQIRKVINCSSNKLHRLPEPETKKSKSGLQLIRCIEASHNEIESL 214

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  L  L++S+N+L+ELP  IGEL  L ++DV  NS+ +IPD  G+ + L   D
Sbjct: 215 PRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLSNLRLLD 274

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              N+L  LP S+ R  +L     + N I ++PE+L     +  +D+  N++  +    +
Sbjct: 275 LRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESVPT--L 332

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++ + L  +  S+N ++ + + I  +  +  L+L +N++  +P SI    SL  F + NN
Sbjct: 333 SNMSNLVTVDLSRNAISTLGD-IEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANN 391

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            +  LP  +G LS L  +D+ +NQL        +L  L +L   NN L+ LP   G + +
Sbjct: 392 QIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRS 451

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           LR++ L+ N L TL   + NGP P  +K L++     +         +L  + T L ++S
Sbjct: 452 LREVDLSNNKLNTL---VGNGPLPRGIKRLKANGNLFKGKVPGRVLHEL-RLLTVLDLSS 507

Query: 360 KELS----------------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            E++                LE   L ++P        +  ++LS+N+I++LP  L +  
Sbjct: 508 SEITSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSKNAIKKLPQNLHNWK 567

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-- 461
            L T+  + NK+ + P+  L  L  L+ L + NN L Q+ ++ F  +  L++L L  N  
Sbjct: 568 RLVTMNAAHNKLAEMPEN-LHQLPVLATLDMSNNELEQIDANIF-HMSRLKVLRLQNNRI 625

Query: 462 --IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
             I     +   SS   L E+     +L E   D+  L  +R  D S N L  IPE    
Sbjct: 626 NRINKTTNDVTLSS--SLHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHK 683

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L   T L+ S+N I  +P ++
Sbjct: 684 LKWATYLNFSENKIQKIPKKV 704



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 223/504 (44%), Gaps = 92/504 (18%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D+W     L  L ++ N ++ L +++ +   L  LN S NKL  LP +I  L  L  L
Sbjct: 50  EFDRWGCEKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSICALEFLTEL 109

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           + ++N ++ +P  I   + L     + N+L+ LP+S+G    L      NN + SLP+ +
Sbjct: 110 NATYNQLIVLPRNIYKCSMLTTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSV 169

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS--RLIR-LD 213
               K+  ++   NKL  L                        PET  S S  +LIR ++
Sbjct: 170 YQIRKV--INCSSNKLHRLPE----------------------PETKKSKSGLQLIRCIE 205

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
              N I S+P ++S   +L    + NN L+ LP  +G+L KL T+D+  N L E      
Sbjct: 206 ASHNEIESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFG 265

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            L  L +LDL  N L+ LP  + ++  L  L   GN ++T+         P  LK ++S 
Sbjct: 266 NLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTI---------PEELKQIKSL 316

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                                      + + L    + ++P+ +     +  +DLSRN+I
Sbjct: 317 ---------------------------QNIDLSANQIESVPT-LSNMSNLVTVDLSRNAI 348

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             L  ++    S++ L LS N++   PD+I  ++ SL   +L NN ++++P     ++  
Sbjct: 349 STL-GDIEDMPSMENLNLSENQLAKVPDSI-GNIESLENFRLANNQIQELP-QTIGNLSS 405

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           LQ +D+S N                        QL    T + RL  L IL    N L +
Sbjct: 406 LQFIDVSNN------------------------QLTSLNTSLRRLGTLEILKAGNNQLTT 441

Query: 513 IPEGFKNLTSLTELDLSDNNISAL 536
           +P+ F  L SL E+DLS+N ++ L
Sbjct: 442 LPQPFGFLRSLREVDLSNNKLNTL 465



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 46/277 (16%)

Query: 266 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           KE+    C+  L  LD+S+N L  L  EIG    L+ L  + N LR L +S+        
Sbjct: 49  KEFDRWGCEKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSI------CA 102

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L++L         +E + T   LI                      +P  I++   +T +
Sbjct: 103 LEFL---------TELNATYNQLI---------------------VLPRNIYKCSMLTTI 132

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
             + N ++ LP  + S  +L  L +  N +K  P ++      ++C    +N L ++P  
Sbjct: 133 RAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQIRKVINC---SSNKLHRLPEP 189

Query: 446 GFKD----IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
             K     + +++ ++ S+N I SLP N  F  L +LQ L L   QL E P +I  LQ+L
Sbjct: 190 ETKKSKSGLQLIRCIEASHNEIESLPRNLSF--LTNLQSLSLSNNQLTELPQNIGELQKL 247

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             +D+ QNSL  IP+ F NL++L  LDL +N ++ LP
Sbjct: 248 ITVDVCQNSLSEIPDSFGNLSNLRLLDLRENKLTTLP 284



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 57/271 (21%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ + L+ N I+KL ++L N   L  +N +HNKL+E+P  + +L +L +LD+S N + +I
Sbjct: 546 LKDINLSKNAIKKLPQNLHNWKRLVTMNAAHNKLAEMPENLHQLPVLATLDMSNNELEQI 605

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
              I   + L      +N++                    N I     D+   S + ++D
Sbjct: 606 DANIFHMSRLKVLRLQNNRI--------------------NRINKTTNDVTLSSSLHEVD 645

Query: 167 VEGNK-------LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             GN+       + VLS+     W       AS N L+ +PE I  L     L+  +N+I
Sbjct: 646 FSGNELEELLEDMEVLSS---VRW-----FDASCNKLSEIPEDIHKLKWATYLNFSENKI 697

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             IP  +    S+  F + NN ++ +P                       ++ C+  LS 
Sbjct: 698 QKIPKKVDRLKSIENFKLANNQITQIPQN---------------------IKRCK-HLSH 735

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           LD++ NS+S  P    KM  L +LL  GNPL
Sbjct: 736 LDITGNSISDFPQGFFKMRKLNELLSQGNPL 766



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 70/127 (55%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L ++  + N +E+L ED+  L  +   + S NKLSE+P  I +L     L+ S N I KI
Sbjct: 641 LHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHKLKWATYLNFSENKIQKI 700

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P ++    ++  F  ++NQ+ ++P ++ RC +LS    + N I+  P+      K+++L 
Sbjct: 701 PKKVDRLKSIENFKLANNQITQIPQNIKRCKHLSHLDITGNSISDFPQGFFKMRKLNELL 760

Query: 167 VEGNKLT 173
            +GN LT
Sbjct: 761 SQGNPLT 767


>gi|118399299|ref|XP_001031975.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89286311|gb|EAR84312.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 5365

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 263/534 (49%), Gaps = 29/534 (5%)

Query: 5    LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
            LK AR +G L L    L++ P ++ + + +    D WWE   L KL L++N I+++ ED 
Sbjct: 1565 LKRARRTGQLTLIGLELKEFPKQIAQ-YQDLQLDDNWWEIAPLTKLDLSNNEIKQIPEDF 1623

Query: 65   RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             +   + ++ + +NKL  LP ++ +L  LKS+D S N I ++P  +    +LV+ + S N
Sbjct: 1624 THEKEIQLVRMLNNKLFTLPNSLFQLTQLKSIDFSKNQIKQLPYSLVQCPSLVEINLSEN 1683

Query: 125  QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            +++ELP ++    NL     S N + ++P  L + + + K+D+  NK++ +     +   
Sbjct: 1684 KIEELPMNMHYLQNLEILNLSQNNLRAVPIFL-EKTPLKKVDLSENKISHIPQPAFSGCL 1742

Query: 185  MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            +L  LI SKNL+  + E    +L  L+ L L QNR++     +     L +  +  N + 
Sbjct: 1743 LLENLILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLVEF-QEVPQSEKLDQLVLSYNRIE 1801

Query: 244  ALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            +   +   +  L  L +++N+LK  +  +  C+  +  LDL+NN L  +P EIG +  L 
Sbjct: 1802 SF-TQFENIPNLSALVINNNKLKNLDKSILICK-NIKTLDLTNNDLPDIPSEIGLLPKLV 1859

Query: 302  KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---------TKEDLITMA 352
            +  + GNPL+ +R+++ N    A+ KYLR R+  +     S           K D I + 
Sbjct: 1860 RFTVEGNPLKCIRNTIKNAGAEAIKKYLRDRIQGDYTQVESAMDPKMNFIQKKLDPIEVL 1919

Query: 353  TRLSVTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPELSSC-ASLQTLIL 410
             R    + E  +   NL+    E ++    +T LD+S N IQ +P +L +   SL  L  
Sbjct: 1920 LREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHLDISNNKIQIIPEQLVNYEKSLSKLHA 1979

Query: 411  SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG------FKDIPMLQILDLSYNIAS 464
            + N +   P +IL  L  L  L+   N +     +       ++  P LQ LDLS N   
Sbjct: 1980 NNNNLIALPQSIL-QLRQLQSLEFKQNNIEYFFDNNSQLKQCWQVFPNLQHLDLSINKLK 2038

Query: 465  LPENPPFSSLPHLQELYLRRMQLRE-AP--TDILRLQQLRILDLSQNSLQSIPE 515
                   S +P L+ L L   Q+ + +P  +   +L +L ++D+S NSLQ + E
Sbjct: 2039 SISGLIISFMPSLRVLNLAYNQISDLSPLFSTSAKLNKLEVIDVSNNSLQELSE 2092



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 163/397 (41%), Gaps = 118/397 (29%)

Query: 32   FDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH 91
            F E  + +K      L +L+L++N IE   +   N+P L+ L +++NKL  L  +I    
Sbjct: 1781 FQEVPQSEK------LDQLVLSYNRIESFTQ-FENIPNLSALVINNNKLKNLDKSILICK 1833

Query: 92   MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK------------------------ 127
             +K+LD++ N +  IP EIG    LV+F    N LK                        
Sbjct: 1834 NIKTLDLTNNDLPDIPSEIGLLPKLVRFTVEGNPLKCIRNTIKNAGAEAIKKYLRDRIQG 1893

Query: 128  ---ELPSSLGRCLNL------------------SDFKASNNCITSLP-EDLADCSKMSKL 165
               ++ S++   +N                   ++F  SN  +T    E L +   ++ L
Sbjct: 1894 DYTQVESAMDPKMNFIQKKLDPIEVLLREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHL 1953

Query: 166  DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            D+  NK+ ++   L+     L++L A+ N L  +P++I  L +L  L+  QN I      
Sbjct: 1954 DISNNKIQIIPEQLVNYEKSLSKLHANNNNLIALPQSILQLRQLQSLEFKQNNI------ 2007

Query: 226  ISGCCSLAEFYMGNNA-----------LSALPAELGKLSK-----------LGTLDLHSN 263
                    E++  NN+           L  L   + KL             L  L+L  N
Sbjct: 2008 --------EYFFDNNSQLKQCWQVFPNLQHLDLSINKLKSISGLIISFMPSLRVLNLAYN 2059

Query: 264  QLKE----YCVEACQLRLSVLDLSNNSLSGL------------------------PPEIG 295
            Q+ +    +   A   +L V+D+SNNSL  L                        P E+G
Sbjct: 2060 QISDLSPLFSTSAKLNKLEVIDVSNNSLQELSEQIAYTLPMLQNLNLENNNLQKIPTELG 2119

Query: 296  KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
             M  L+ L + GNPL+ ++ +++   T ++L YLR+R
Sbjct: 2120 FMK-LKTLKIDGNPLKLIKRAVIEKGTVSILDYLRTR 2155



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 186/429 (43%), Gaps = 48/429 (11%)

Query: 125  QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            +LKE P  + +  +L            L ++  + + ++KLD+  N++  +  +      
Sbjct: 1580 ELKEFPKQIAQYQDLQ-----------LDDNWWEIAPLTKLDLSNNEIKQIPEDFTHEKE 1628

Query: 185  M-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            + L  ++ +K  L  +P ++  L++L  +D  +N+I  +P S+  C SL E  +  N + 
Sbjct: 1629 IQLVRMLNNK--LFTLPNSLFQLTQLKSIDFSKNQIKQLPYSLVQCPSLVEINLSENKIE 1686

Query: 244  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRK 302
             LP  +  L  L  L+L  N L+   +   +  L  +DLS N +S +P P       L  
Sbjct: 1687 ELPMNMHYLQNLEILNLSQNNLRAVPIFLEKTPLKKVDLSENKISHIPQPAFSGCLLLEN 1746

Query: 303  LLLTGNPLRTLRSSLVNGPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L+L+ N ++ +           +  YL ++RL E ++   S   + L+    R+   ++ 
Sbjct: 1747 LILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLVEFQEVPQSEKLDQLVLSYNRIESFTQ- 1805

Query: 362  LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
                      IP+       ++ L ++ N ++ L   +  C +++TL L+ N + D P  
Sbjct: 1806 -------FENIPN-------LSALVINNNKLKNLDKSILICKNIKTLDLTNNDLPDIPSE 1851

Query: 422  ILTSLSSLSCLKLDNNPLR----QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            I   L  L    ++ NPL+     + + G + I       L   I        ++ +   
Sbjct: 1852 IGL-LPKLVRFTVEGNPLKCIRNTIKNAGAEAIKKY----LRDRIQG-----DYTQVESA 1901

Query: 478  QELYLRRMQLREAPTDILRLQQLRILDL---SQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             +  +  +Q +  P ++L  +  R  +    +QN  +   E   NL  LT LD+S+N I 
Sbjct: 1902 MDPKMNFIQKKLDPIEVLLREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHLDISNNKIQ 1961

Query: 535  ALPPELVSV 543
             +P +LV+ 
Sbjct: 1962 IIPEQLVNY 1970


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 193/394 (48%), Gaps = 16/394 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+S N ++
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 86

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 87  ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 146

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L+L  N+I ++P 
Sbjct: 147 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ 205

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 206 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 265

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++L         T
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQL---------T 316

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I     L    +EL L    L+ IP EI +   + +L LS N +  +P E+    
Sbjct: 317 ILPKEIGKLQNL----QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +LQ L LS N++   P  I   L +L  L L NN
Sbjct: 373 NLQELYLSNNQLITIPKEI-GQLQNLQTLYLRNN 405



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 197/424 (46%), Gaps = 66/424 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL     S+N +  LP+++     +  LD+  N+L +L   
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIIL--- 88

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ I  L  L  LDL  N++  +P  I    +L E Y+ 
Sbjct: 89  ---------------------PKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLS 127

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L L NN L+ LP EIGK+
Sbjct: 128 NNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKL 187

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L+ N ++TL         P  ++ L+                           
Sbjct: 188 QKLQWLNLSYNQIKTL---------PQEIEKLQKL------------------------- 213

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             + L L    L+ +P EI +  ++  L L  N +  LP E+    +L+ L L+ N++  
Sbjct: 214 --QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 271

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            P  I   L +L  L L +N L  +P +    +  LQ+LDL  N +  LP+      L +
Sbjct: 272 IPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGNNQLTILPKE--IGKLQN 327

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQELYL   QL   P +I +LQ L+ L LS N L +IP+    L +L EL LS+N +  +
Sbjct: 328 LQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITI 387

Query: 537 PPEL 540
           P E+
Sbjct: 388 PKEI 391



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+ K                LQ L L++N I+ L +++  L  L  
Sbjct: 169 SLYLPNNQLTTLPQEIGK-------------LQKLQWLNLSYNQIKTLPQEIEKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 216 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 276 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 334

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 335 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 394

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 395 QNLQTLYLRNNQF 407



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 262 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 308

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 309 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 369 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 409



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  LDLS   ++ LP ++    +LQ L LS N++   P  I   L +L  L L +N L 
Sbjct: 28  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEI-RQLKNLQMLDLSDNQLI 86

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQELYL   QL   P +I +LQ+
Sbjct: 87  ILPKE-IRQLKNLQMLDLRSNQLTILPKE--IGKLQNLQELYLSNNQLTTFPKEIGKLQK 143

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ L+LS N +++IP+  + L  L  L L +N ++ LP E+
Sbjct: 144 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 184


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 171/535 (31%), Positives = 246/535 (45%), Gaps = 52/535 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 13  NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 72

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 73  LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 132

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 133 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 191

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NRI ++P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L 
Sbjct: 192 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 251

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTP 323
            L + +LS N L+ +P EIG +  LR L L  N L+TL               L+N    
Sbjct: 252 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 311

Query: 324 ALLKYLRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
              K +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI +
Sbjct: 312 EERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQEFSLFPKEILK 369

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDN 436
              +  L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      N
Sbjct: 370 LKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--N 427

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENP-PFSSLP----HLQELYLRRM---QLR 488
           N    +P    K+I  LQ      N+ SL  N   F   P     L++L +  +   QL 
Sbjct: 428 NEFEVLP----KEIARLQ------NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD 477

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             P  I RL+ L++LDLS N L ++P     L +LTEL L  N I  LP E+  +
Sbjct: 478 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 532



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 217/473 (45%), Gaps = 74/473 (15%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 115 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 174

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 175 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 233

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 234 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 293

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQ-----------------------------LRLSVL 280
            KL  L  L+L  N L     +  Q                             L++  L
Sbjct: 294 EKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSL 353

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L     S  P EI K+  LR L L    L  L   +V       LK+L           
Sbjct: 354 SLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVR------LKHLE---------- 397

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDL-SRNSIQELPPE 398
                        RLS+        G+N L ++P EI     +  LD+ + N  + LP E
Sbjct: 398 -------------RLSL--------GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 436

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           ++   +L++L+L++N+ K +P  I   L  L  L ++ N L  +P +    +  LQ+LDL
Sbjct: 437 IARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDALP-EKIGRLKGLQMLDL 494

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
           S+N + +LP       L +L ELYL+  +++  P +I RLQ LR L L +N +
Sbjct: 495 SHNRLTTLPSE--IGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPI 545



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 203/443 (45%), Gaps = 58/443 (13%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G+  NL     S N +T+ P+++     + +L
Sbjct: 4   LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 63

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ GN+L  L                        P+ IG L +L +L+L  N+I ++P  
Sbjct: 64  DLNGNQLKTL------------------------PKEIGQLQKLEKLNLDGNQITTLPKG 99

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
                         N L+ LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  
Sbjct: 100 --------------NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG 145

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI K+  L++L L GN L  +   +       +L+   +R+        ST 
Sbjct: 146 NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRI--------STL 197

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            +++       S   +EL+L G  L  +P EI E   + +L+L  N I+ LP E+ +  +
Sbjct: 198 PKEI-----EKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALEN 252

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L    LS NK+   P  I  +L +L  L L+NN L+ +P    + +  L++L+L  N   
Sbjct: 253 LWIFNLSGNKLASIPKEI-GNLQNLRMLYLENNQLKTLPRQ-MEKLQDLEVLNLLINPLL 310

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDI-LRLQQ-LRILDLS--QNSLQSIPEGFKNL 520
             E     +L     + LR ++  E   ++ L L+Q L+IL LS         P+    L
Sbjct: 311 SEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQEFSLFPKEILKL 370

Query: 521 TSLTELDLSDNNISALPPELVSV 543
            +L  L L D ++ ALP E+V +
Sbjct: 371 KNLRSLSLYDTSLVALPKEIVRL 393



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 165/390 (42%), Gaps = 93/390 (23%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 140 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 199

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIG--------------------ELHMLKSL---DVS 99
           ++     L  LN+  N+L  LP  IG                    E+  L++L   ++S
Sbjct: 200 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 259

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED---- 155
            N +  IP EIG+   L      +NQLK LP  + +   L D +  N  I  L  +    
Sbjct: 260 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEK---LQDLEVLNLLINPLLSEERKK 316

Query: 156 ----LADCSKMSKLDVEGNK------------LTVLSNNL-IASWTML-TELIASKNL-- 195
               L +C+ +   DVE  +            L +LS +L    +++   E++  KNL  
Sbjct: 317 IQALLPNCN-IDLRDVEEGETYRNLNLALEQPLKILSLSLEYQEFSLFPKEILKLKNLRS 375

Query: 196 -------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-NNALSALPA 247
                  L  +P+ I  L  L RL L  N++ S+P  I    +L    +G NN    LP 
Sbjct: 376 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 435

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLS 283
           E+ +L  L +L L+ N+ K +  E  +L+                        L +LDLS
Sbjct: 436 EIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLS 495

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L +L L  N ++TL
Sbjct: 496 HNRLTTLPSEIGQLHNLTELYLQYNRIKTL 525


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 206/420 (49%), Gaps = 54/420 (12%)

Query: 34  EAGEGDKWW---EAV----DLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++   EA+    D++ L L      N +  L +++ NL  L  LN+  N+L+ 
Sbjct: 87  EADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTT 146

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L++LD+S N +  +P EIG+   L   D + NQLK LP  + +   L   
Sbjct: 147 LPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEAL 206

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN +T+LP+++ +   + +L++  N+ T L                        PE 
Sbjct: 207 HLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL------------------------PEE 242

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L +L +L L  +R+ ++P  I    +L E  + +N  + LP E+G L KL TLDL+ 
Sbjct: 243 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 302

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           ++L     E  +L +L  L+L  N L  LP EIGK+  L+ L L GN L TL   + N  
Sbjct: 303 SRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGN-- 360

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEA 379
               L+ L+         E S     L T+  ++    K  ELSL G  L  +P EI   
Sbjct: 361 ----LQNLQ---------ELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNL 407

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             + +L+L+ N +  LP E+ +  SL++L LS N +  +P+ I   L  L  L L  NP 
Sbjct: 408 QNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEI-GKLQKLKWLYLGGNPF 466



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 159/328 (48%), Gaps = 40/328 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +P E+                  LQ L LA N ++ L +++  L  L  
Sbjct: 159 TLDLSHNRLTTLPKEI-------------GNLQKLQTLDLAQNQLKTLPKEIEKLQKLEA 205

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K   + ++L  LP  
Sbjct: 206 LHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKE 265

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N  T+LPE++ +  K+  LD+  ++LT L    I     L +L   
Sbjct: 266 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKE-IGKLQKLQKLNLY 324

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KN L  +P+ IG L  L  L L+ N + ++P  I    +L E  +G+N L+ LP ++G L
Sbjct: 325 KNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNL 384

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLS 288
            KL  L L  N+LK    E   L+                        L  L+LS NSL 
Sbjct: 385 QKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLI 444

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             P EIGK+  L+ L L GNP   LRS 
Sbjct: 445 SFPEEIGKLQKLKWLYLGGNPF--LRSQ 470



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 19/349 (5%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L  N++ ++P  I     L    + +N L+ LP E+G L 
Sbjct: 119 NKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 178

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL TLDL  NQLK    E  +L +L  L L NN L+ LP EIG +  L++L L  N   T
Sbjct: 179 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTT 238

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   + N      L    SRL         TT    I     L    +EL+L     + +
Sbjct: 239 LPEEIGNLQKLQKLSLAHSRL---------TTLPKEIGNLQNL----QELNLNSNQFTTL 285

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI    ++  LDL+ + +  LP E+     LQ L L +N++K  P  I   L +L  L
Sbjct: 286 PEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEI-GKLQNLKNL 344

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L+ N L  +P +   ++  LQ L L  N + +LPE     +L  LQEL L   +L+  P
Sbjct: 345 SLNGNELTTLPKE-IGNLQNLQELSLGSNQLTTLPEK--IGNLQKLQELSLAGNRLKTLP 401

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I  LQ L+ L+L+ N L ++P+  +NL SL  L+LS N++ + P E+
Sbjct: 402 KEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEI 450


>gi|326921749|ref|XP_003207118.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Meleagris gallopavo]
          Length = 1287

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 242/500 (48%), Gaps = 22/500 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++HN +  L E+L  L  +  L ++HN + E P A   L  L++L+++ N +  +
Sbjct: 223 LKVLNVSHNQLSCLPEELSKLVNIKELFLNHNSIDEFPFA---LKSLETLELAGNKLKTL 279

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L   +  SNQ+   P  L    NL +     N I SLP+D+ +  K+ +  
Sbjct: 280 PDAMIDMKNLKVLNIDSNQISIFPRVLCYLPNLVNLSLCENFIQSLPKDIKELKKLQEFS 339

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  L+  L    T L  L A  N L  + + + +L  L  L+L +N   SI  ++
Sbjct: 340 ISHNKLIFLAVQLF-QLTKLKGLRADDNKLEFLSDKVENLRELTFLNLSKNLFKSITDNL 398

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C  L    + +N L+ LPA + +L  L  L L+ NQL     +   L+ LS ++LS N
Sbjct: 399 CNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHSLVEQISHLKDLSKIELSGN 458

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P E+     + K  L+ N L    + +      + LKYL   L  N  SE     
Sbjct: 459 VLTYIPVELKTCIRITKADLSNNKLSQFPNVVC---ALSDLKYLN--LSGNSISELIPGI 513

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            D+  +        + L L+   LS+  + +    ++  LD+S N I  +P  +S   +L
Sbjct: 514 SDIKDL--------EHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVSEMKAL 565

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           Q L+L  NK   +P+  L SL  L  L + NN ++ +P     ++ M++ L++S N  AS
Sbjct: 566 QVLLLHHNKFDSFPEE-LCSLKGLKTLDISNNQIKDIPLK-ISNLEMIKDLNVSNNQFAS 623

Query: 465 LP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            P E    SSL  L    +  ++L + P ++ +L  LR LD+S N+L+ +P+    L  L
Sbjct: 624 FPSEICLLSSLEKLTVCQVNGLKLTKIPEELSKLVSLRELDISHNALKEMPDSIGELKFL 683

Query: 524 TELDLSDNNISALPPELVSV 543
             L  ++N IS LP  + S+
Sbjct: 684 VHLIANNNEISQLPKSITSL 703



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 206/431 (47%), Gaps = 47/431 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L    N +E L + + NL  LT LN+S N    +   +    MLK L +  N
Sbjct: 353 FQLTKLKGLRADDNKLEFLSDKVENLRELTFLNLSKNLFKSITDNLCNCTMLKHLVLCDN 412

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  I     L +   + NQL  L   +    +LS  + S N +T +P +L  C +
Sbjct: 413 QLTQLPANIHRLKHLKELSLNRNQLHSLVEQISHLKDLSKIELSGNVLTYIPVELKTCIR 472

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++K D+  NKL+    N++ + + L  L  S N ++ +   I  +  L  L+L +N++  
Sbjct: 473 ITKADLSNNKLSQFP-NVVCALSDLKYLNLSGNSISELIPGISDIKDLEHLELKKNKL-- 529

Query: 222 IPSSISGC-CSLAEFY---MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
             SS S C CSL +     +  N ++++PA + ++  L  L LH N+   +  E C L+ 
Sbjct: 530 --SSFSACLCSLTKLVYLDVSENEINSMPAVVSEMKALQVLLLHHNKFDSFPEELCSLKG 587

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LD+SNN +  +P +I  +  ++ L ++ N   +  S +                   
Sbjct: 588 LKTLDISNNQIKDIPLKISNLEMIKDLNVSNNQFASFPSEIC------------------ 629

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                      L++   +L+V      + G+ L+ IP E+ +   + +LD+S N+++E+P
Sbjct: 630 -----------LLSSLEKLTVC----QVNGLKLTKIPEELSKLVSLRELDISHNALKEMP 674

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             +     L  LI + N+I   P +I TSL SL  L L  N LR +P+ G + + +L+  
Sbjct: 675 DSIGELKFLVHLIANNNEISQLPKSI-TSLRSLQHLDLSENRLRYLPA-GLRHLYLLK-- 730

Query: 457 DLSYNIASLPE 467
           D++++  SL E
Sbjct: 731 DINFDGNSLFE 741



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 4/232 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL+ L L  N +      L +L  L  L+VS N+++ +PA + E+  L+ L +  N    
Sbjct: 518 DLEHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVSEMKALQVLLLHHNKFDS 577

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P+E+ S   L   D S+NQ+K++P  +     + D   SNN   S P ++   S + KL
Sbjct: 578 FPEELCSLKGLKTLDISNNQIKDIPLKISNLEMIKDLNVSNNQFASFPSEICLLSSLEKL 637

Query: 166 ---DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
               V G KLT +   L +    L EL  S N L  MP++IG L  L+ L  + N I  +
Sbjct: 638 TVCQVNGLKLTKIPEEL-SKLVSLRELDISHNALKEMPDSIGELKFLVHLIANNNEISQL 696

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           P SI+   SL    +  N L  LPA L  L  L  ++   N L E   + C+
Sbjct: 697 PKSITSLRSLQHLDLSENRLRYLPAGLRHLYLLKDINFDGNSLFEPLQDICK 748



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%)

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L +L+ L L R +L   P +I  L +L++L++S N L  +PE    L ++ EL L+ N+
Sbjct: 196 NLSNLEILILERNRLTLLPPEISLLHKLKVLNVSHNQLSCLPEELSKLVNIKELFLNHNS 255

Query: 533 ISALPPELVSV 543
           I   P  L S+
Sbjct: 256 IDEFPFALKSL 266


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 38/343 (11%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           ++LD+SF  +  +P EIG  TAL   D  +N+L  LPS +G+ +NL+    ++N +T+LP
Sbjct: 19  ETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALP 78

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            ++   S +S+L +  NKLT L    I   T+L EL  S N L  +P TI +L  + RL 
Sbjct: 79  PEIGKLSNLSRLHLSYNKLTSLPPE-IGQLTILCELYLSHNHLETLPFTIENLVHISRLS 137

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N++ ++PS+I G   L+   + NN L+ LP E+G+L+ L  LD+  NQL     E  
Sbjct: 138 LSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIG 197

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           QL  L  +D+S N L+ LPPEIG++  L  L ++ N L  L         P  + YL   
Sbjct: 198 QLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTIL---------PPEIGYL--- 245

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                         +LI+           L+L    LS++P EI +  ++ +L LS N +
Sbjct: 246 -------------SNLIS-----------LNLSYNKLSSLPPEIGQLTKLIQLRLSHNQL 281

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           QELP E+     L +L+L  N++   P  ++  +      +LD
Sbjct: 282 QELPAEIGHLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLD 324



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 15/307 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L  +P E+ K                L+ L L +N +  L  ++  L  LT 
Sbjct: 20  TLDLSFKKLETLPPEIGK-------------LTALRYLDLRNNKLTTLPSEIGKLINLTS 66

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN++ N+L+ LP  IG+L  L  L +S+N +  +P EIG  T L +   S N L+ LP +
Sbjct: 67  LNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFT 126

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +   +++S    S N +T+LP  +    ++S LD+  N+LT L    I     L +L   
Sbjct: 127 IENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPE-IGQLNSLNQLDVG 185

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  LI +D+  N++ S+P  I    +L    + NN L+ LP E+G L
Sbjct: 186 YNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYL 245

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           S L +L+L  N+L     E  QL +L  L LS+N L  LP EIG +T L  L+L  N L 
Sbjct: 246 SNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLL 305

Query: 312 TLRSSLV 318
           TL   L+
Sbjct: 306 TLPFELI 312



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 132/250 (52%), Gaps = 29/250 (11%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+HN++E L   + NL  ++ L++S+N+L+ LP+AI  L  L  LD++ N +  +P 
Sbjct: 112 ELYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPP 171

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG   +L + D   NQL  LP  +G+ LNL     S N +TSLP ++     +  L + 
Sbjct: 172 EIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTIS 231

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT+L                        P  IG LS LI L+L  N++ S+P  I  
Sbjct: 232 NNQLTIL------------------------PPEIGYLSNLISLNLSYNKLSSLPPEIGQ 267

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSN 284
              L +  + +N L  LPAE+G L++L +L L +NQL     E  QL    +L+ LDL  
Sbjct: 268 LTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQE 327

Query: 285 NSLSGLPPEI 294
           N LS +PPEI
Sbjct: 328 NLLS-IPPEI 336



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 162/349 (46%), Gaps = 63/349 (18%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L+ L  LDL  N++ ++PS I    +L    + +N L+ALP E+GKLS L
Sbjct: 28  LETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPPEIGKLSNL 87

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                                 S L LS N L+ LPPEIG++T L +L L+ N L TL  
Sbjct: 88  ----------------------SRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPF 125

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           ++ N     L+   R  L  N+     TT    I    RLS     L L    L+ +P E
Sbjct: 126 TIEN-----LVHISRLSLSYNQ----LTTLPSAIKGLMRLSW----LDLNNNQLTTLPPE 172

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   + +LD+  N +  LPPE+    +L ++ +S NK+   P  I   L +L  L + 
Sbjct: 173 IGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEI-GQLLNLDSLTIS 231

Query: 436 NNPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           NN L  +P + G+  +  L  L+LSYN                        +L   P +I
Sbjct: 232 NNQLTILPPEIGY--LSNLISLNLSYN------------------------KLSSLPPEI 265

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +L +L  L LS N LQ +P    +LT LT L L +N +  LP EL+ +
Sbjct: 266 GQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPFELIQL 314



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 131/278 (47%), Gaps = 41/278 (14%)

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +L++   +A + +   LDLS   L  LPPEIGK+T LR L L  N L TL S +      
Sbjct: 5   ELQQVIQQAIEEKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEI------ 58

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          +++TS  L+L    L+A+P EI +   ++
Sbjct: 59  ----------------------------GKLINLTS--LNLTDNQLTALPPEIGKLSNLS 88

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +L LS N +  LPPE+     L  L LS N ++  P  I  +L  +S L L  N L  +P
Sbjct: 89  RLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTI-ENLVHISRLSLSYNQLTTLP 147

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           S   K +  L  LDL+ N + +LP  P    L  L +L +   QL   P +I +L  L  
Sbjct: 148 S-AIKGLMRLSWLDLNNNQLTTLP--PEIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLIS 204

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +D+S N L S+P     L +L  L +S+N ++ LPPE+
Sbjct: 205 IDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEI 242


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 214/452 (47%), Gaps = 55/452 (12%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +I++     G  +LNLS   L  +P E+ K               +L+ L L +N++ +L
Sbjct: 9   KIIEQTEKEGLTTLNLSGEDLHFLPKEIKK-------------LPNLEYLYLGNNHLTEL 55

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E++  L  L +L++S+N +   P  I +L  LK L +  N +  +P+EIG+   L   D
Sbjct: 56  PEEIEQLKKLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLD 115

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQL +LP   G+ + L +     N +TSLP +    SK+ +LD+  N+LT L     
Sbjct: 116 LSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYL----- 170

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                              PE  G L  L ++DL  N+++++P  I    +L    +G N
Sbjct: 171 -------------------PEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGEN 211

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L++LP ELGKLSKL  L+L  NQL +  +   +L  L  L L +N  + LP EI ++T 
Sbjct: 212 QLTSLPPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTN 271

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L +  N L  L   +       LL      + EN+ +   T  E L ++        
Sbjct: 272 LKSLYVIQNQLNNLTPEIGQLSNLELLD-----ISENKLNSLPTEIEKLTSL-------- 318

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +   L   +LS +P EI     +  L+L  N +  LP E+    +L+ L LS NKI + P
Sbjct: 319 RYFILNVNHLSNLPKEIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLP 378

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
             I   L+ L  L L  NP+  +P +  K+ P
Sbjct: 379 IEI-KQLTKLKHLDLSKNPIS-IPPEILKEKP 408



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 195/435 (44%), Gaps = 56/435 (12%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L   + S   L  LP  + +  NL      NN +T LPE++    K+            
Sbjct: 18  GLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKL--------LD 69

Query: 175 LSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
           LSNNLI S+       T L  L    N LN +PE IG+L+ L  LDL  N++  +P    
Sbjct: 70  LSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFG 129

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
               L E  +  N L++LP E G+LSKL  LDL  N+L     E  +L  L  +DL NN 
Sbjct: 130 KLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNK 189

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L  LP EIG++  L  L +  N L +L   L       L K  +  L  N+ S+   ++ 
Sbjct: 190 LITLPKEIGQLANLELLEIGENQLTSLPPEL-----GKLSKLKQLNLSVNQLSDLPLSQA 244

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            LI + T        L L     + +P+EI     +  L + +N +  L PE+   ++L+
Sbjct: 245 KLINLKT--------LYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNLE 296

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            L +S NK+   P  I   L+SL    L+ N L  +P +                     
Sbjct: 297 LLDISENKLNSLPTEI-EKLTSLRYFILNVNHLSNLPKE--------------------- 334

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  L +L  L L+  QL   PT+I +L  L  L LS+N + ++P   K LT L  L
Sbjct: 335 ----IGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHL 390

Query: 527 DLSDNNISALPPELV 541
           DLS N IS +PPE++
Sbjct: 391 DLSKNPIS-IPPEIL 404



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 23/310 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N + +L  +   L  L  L +  N+L+ LP   G+L  LK LD+  N +  
Sbjct: 110 NLEYLDLSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTY 169

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+E G    L K D  +N+L  LP  +G+  NL   +   N +TSLP +L   SK+ +L
Sbjct: 170 LPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQL 229

Query: 166 DVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETI 203
           ++  N+L+ L                SN        I+  T L  L   +N LN +   I
Sbjct: 230 NLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEI 289

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G LS L  LD+ +N++ S+P+ I    SL  F +  N LS LP E+G L+ L TL+L  N
Sbjct: 290 GQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQEN 349

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L  L  L LS N +S LP EI ++T L+ L L+ NP+      L   P 
Sbjct: 350 QLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPISIPPEILKEKPQ 409

Query: 323 PALLKYLRSR 332
             L  Y  S 
Sbjct: 410 KILNCYFTSH 419



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 206/453 (45%), Gaps = 70/453 (15%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT LN+S   L  LP  I +L  L+ L +  N + ++P+EI     L   D S+N +K  
Sbjct: 19  LTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSF 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +  NL      +N + +LPE++ + + +  LD+                      
Sbjct: 79  PLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDL---------------------- 116

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N LN +P   G L +L  L L  N++ S+P        L E  +  N L+ LP E 
Sbjct: 117 --SNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEF 174

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GKL  L  +DL +N+L     E  QL  L +L++  N L+ LPPE+GK++ L++L L+ N
Sbjct: 175 GKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVN 234

Query: 309 PLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            L  L   ++ L+N  T  L     ++LP    +E S      +T    L V   +L+  
Sbjct: 235 QLSDLPLSQAKLINLKTLYLCSNQFTKLP----AEISR-----LTNLKSLYVIQNQLN-- 283

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
             NL+    EI +   +  LD+S N +  LP E+    SL+  IL+ N + + P  I   
Sbjct: 284 --NLTP---EIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEI-GH 337

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L++L  L L  N L  +P++                            L +L+ L+L   
Sbjct: 338 LTNLVTLNLQENQLTTLPTE-------------------------IEKLMNLEYLFLSEN 372

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           ++   P +I +L +L+ LDLS+N +   PE  K
Sbjct: 373 KISNLPIEIKQLTKLKHLDLSKNPISIPPEILK 405


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 193/394 (48%), Gaps = 16/394 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+S N ++
Sbjct: 47  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 106

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 107 ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 166

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L+L  N+I ++P 
Sbjct: 167 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ 225

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 226 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 285

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++L         T
Sbjct: 286 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQL---------T 336

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I     L    +EL L    L+ IP EI +   + +L LS N +  +P E+    
Sbjct: 337 ILPKEIGKLQNL----QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 392

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +LQ L LS N++   P  I   L +L  L L NN
Sbjct: 393 NLQELYLSNNQLITIPKEI-GQLQNLQTLYLRNN 425



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 213/469 (45%), Gaps = 82/469 (17%)

Query: 90  LHMLKSLDVSFNSIMKIPDEI------GSATALVK----------FDCSSNQLKELPSSL 133
           L+ L+ + + F  +M +  EI      G+   L K           D S  +LK LP  +
Sbjct: 7   LNYLQKITIGFLFLMNLSCEIQACEEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKKI 66

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S+N +  LP+++     +  LD+  N+L +L                  
Sbjct: 67  GQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIIL------------------ 108

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ I  L  L  LDL  N++  +P  I    +L E Y+ NN L+  P E+GKL 
Sbjct: 109 ------PKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 162

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L+L +NQ+K    E  +L +L  L L NN L+ LP EIGK+  L+ L L+ N ++T
Sbjct: 163 KLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKT 222

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         P  ++ L+                             + L L    L+ +
Sbjct: 223 L---------PQEIEKLQKL---------------------------QWLYLHKNQLTTL 246

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +  ++  L L  N +  LP E+    +L+ L L+ N++   P  I   L +L  L
Sbjct: 247 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDL 305

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  +P +    +  LQ+LDL  N +  LP+      L +LQELYL   QL   P
Sbjct: 306 YLVSNQLTTIPKE-IGQLQNLQMLDLGNNQLTILPKE--IGKLQNLQELYLSNNQLTTIP 362

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I +LQ L+ L LS N L +IP+    L +L EL LS+N +  +P E+
Sbjct: 363 KEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEI 411



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 189 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 235

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 236 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 295

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 296 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 354

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 355 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 414

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 415 QNLQTLYLRNNQF 427



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 282 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 328

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 329 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 388

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 389 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 429


>gi|395540076|ref|XP_003771986.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sarcophilus harrisii]
          Length = 908

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 231/489 (47%), Gaps = 19/489 (3%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           + HN+I  L  ++  L  L  L + +NK  E P  +G L  L++L +S N + ++P+ + 
Sbjct: 266 VCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGNGLKRLPEMMA 325

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D +SNQ    P+ +     L     S N I+SLP+++     + +L +  NK
Sbjct: 326 NMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLISSLPKEIKQLKNLEELFLNHNK 385

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L  L    N L  +   I +   L  L L +N +  +   I  C  
Sbjct: 386 LTFLPVQ-IFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLNKEIYSCAK 444

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +NAL  +P  + +L  L  L ++ N++    V    ++ L VL+ S N++ G+
Sbjct: 445 LECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLEFSGNAIKGI 504

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EI     +RK+ L+ N ++     L      + L+YL   L  N+ SE        I 
Sbjct: 505 PIEIKNCNQIRKMDLSFNKIQDFPVGLC---ALSFLEYL--NLNGNDLSE--------IP 551

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +    S     L L   NLS     I     +  L+LS+N I ++PP +S+  SL+ LIL
Sbjct: 552 LDLSFSRQLIHLELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLIL 611

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-EN 468
           + N  + +P  + T L +L  L L  N ++ VPS+  +++  +Q LD S N   S P E 
Sbjct: 612 NGNNFEIFPKELCT-LENLQILDLSENQIQYVPSE-IRNLQAIQNLDFSSNRFGSFPIEL 669

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
              S+L  LQ       +L + P ++  L QL ILD+S N+++ +P+    L +L     
Sbjct: 670 CHLSTLKELQLCQKNGSKLTQVPDELSNLTQLEILDISHNTIKELPKNIGELKNLVTFKA 729

Query: 529 SDNNISALP 537
           ++N I  LP
Sbjct: 730 NNNLIGLLP 738



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 225/518 (43%), Gaps = 92/518 (17%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           + KN  +  +G   ++  D++ L L  N I+  + +  N+  L +L++  N+L  LP  I
Sbjct: 199 ISKNLQKFPKG--LFKTQDVKYLYLDKNKIKTFEVE-PNMASLELLSMKENELIALPPEI 255

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             L  L  L+V  N I  +P EI     L +    +N+  E P+ LG    L     S N
Sbjct: 256 KLLSNLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGN 315

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +  LPE +A+   +  LD+  N+ ++  N ++   T L +L  SKNL++ +P+ I  L 
Sbjct: 316 GLKRLPEMMANMKNLMVLDLNSNQFSIFPN-IVCYLTKLIKLSVSKNLISSLPKEIKQLK 374

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L+ N++  +P  I     L   ++ +N L +L   +    +L  L L  N LK+
Sbjct: 375 NLEELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQ 434

Query: 268 YCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              E  +C  +L  L LS+N+L  +P  I +             LR LR+  +N      
Sbjct: 435 LNKEIYSCA-KLECLSLSDNALEIIPGNIHR-------------LRNLRALYIN------ 474

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
               R+++                                     AI   I     +  L
Sbjct: 475 ----RNKI------------------------------------MAINVNISHMKYLKVL 494

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           + S N+I+ +P E+ +C  ++ + LS NKI+D+P   L +LS L  L L+ N L ++P  
Sbjct: 495 EFSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVG-LCALSFLEYLNLNGNDLSEIP-- 551

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                     LDLS++            L HL+   L +  L      I RL  L  L+L
Sbjct: 552 ----------LDLSFS----------RQLIHLE---LSQNNLSFFSDYICRLFNLDYLNL 588

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+N +  +P    N+TSL  L L+ NN    P EL ++
Sbjct: 589 SKNKISQVPPSISNMTSLRVLILNGNNFEIFPKELCTL 626



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 21/350 (6%)

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           + SKNL    P+ +     +  L L +N+I +         SL    M  N L ALP E+
Sbjct: 198 LISKNL-QKFPKGLFKTQDVKYLYLDKNKIKTFEVE-PNMASLELLSMKENELIALPPEI 255

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             LS L  L++  N +     E  QL  L  L L NN     P  +G +  L  L L+GN
Sbjct: 256 KLLSNLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGN 315

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+ L         P ++  +++ +  + +S   +   +++   T+L     +LS+    
Sbjct: 316 GLKRL---------PEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLI----KLSVSKNL 362

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           +S++P EI +   + +L L+ N +  LP ++     L+ L L  NK++     I  +   
Sbjct: 363 ISSLPKEIKQLKNLEELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNI-ENFKE 421

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L+LD N L+Q+  + +     L+ L LS N +  +P N     L +L+ LY+ R ++
Sbjct: 422 LKVLQLDKNLLKQLNKEIY-SCAKLECLSLSDNALEIIPGN--IHRLRNLRALYINRNKI 478

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
                +I  ++ L++L+ S N+++ IP   KN   + ++DLS N I   P
Sbjct: 479 MAINVNISHMKYLKVLEFSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDFP 528



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 3/137 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV---SFNS 102
           +LQ L L+ N I+ +  ++RNL  +  L+ S N+    P  +  L  LK L +   + + 
Sbjct: 628 NLQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKELQLCQKNGSK 687

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + ++PDE+ + T L   D S N +KELP ++G   NL  FKA+NN I  LP      +K+
Sbjct: 688 LTQVPDELSNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGLLPLSFESLNKL 747

Query: 163 SKLDVEGNKLTVLSNNL 179
             L++ GN+LT L N+L
Sbjct: 748 QHLNMSGNRLTTLPNSL 764



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 4/226 (1%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ NN+    + +  L  L  LN+S NK+S++P +I  +  L+ L ++ N+    P E+ 
Sbjct: 565 LSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNNFEIFPKELC 624

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV---E 168
           +   L   D S NQ++ +PS +     + +   S+N   S P +L   S + +L +    
Sbjct: 625 TLENLQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKELQLCQKN 684

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           G+KLT + + L ++ T L  L  S N +  +P+ IG L  L+    + N I  +P S   
Sbjct: 685 GSKLTQVPDEL-SNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGLLPLSFES 743

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
              L    M  N L+ LP  L  LS L  ++   N L +   E C+
Sbjct: 744 LNKLQHLNMSGNRLTTLPNSLNNLSSLREINFDENPLVKPPAEICK 789


>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 550

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 208/447 (46%), Gaps = 56/447 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L+++P  VYK              + L  L L  N I ++ ED+ NL  LT+L
Sbjct: 135 LDLRHNKLKEIPEVVYK-------------LLSLTTLFLRFNRITQVGEDIHNLTKLTML 181

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LP  +G+L +L + DVS N +  +P+EIG+ T L   D   N+L +LP + 
Sbjct: 182 SLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETT 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    LS      N +T +P+ L++C  + + +VEGN + +L   L+ S   LT +  S+
Sbjct: 242 GNLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSR 301

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G   +   +D   +  N+I  IP  I S    L +  M +N L+ALP ++
Sbjct: 302 NNFTAYP--VGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDV 359

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
              + +  L+L +NQ+ +   +   L  L VL LSNN L  LP  IG ++ LR+L L  N
Sbjct: 360 NSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEEN 419

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P+ L YL+                             ++LS++   
Sbjct: 420 RLEAL---------PSELAYLKEL---------------------------QKLSVQTNQ 443

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     +  L    N++  LP E+ S   LQ L ++ N   +     L   SS
Sbjct: 444 LTQLPRSIGRLSNLVYLKAGENNLASLPEEIGSLEQLQQLYINDNLNLNHLPFELALCSS 503

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           L  + ++N PL Q+P +     P L I
Sbjct: 504 LQIMSIENCPLSQIPQEVVAGGPSLVI 530



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 224/455 (49%), Gaps = 26/455 (5%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S  SI  +P  +   T LV+     N+L  LPS +G   NL     + N +T+LP
Sbjct: 64  RRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLP 123

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           E+L     +  LD+  NKL  +   ++     LT L    N +  + E I +L++L  L 
Sbjct: 124 EELEKLGLLKVLDLRHNKLKEIPE-VVYKLLSLTTLFLRFNRITQVGEDIHNLTKLTMLS 182

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L +N+I ++P  +     L  F + +N L  LP E+G  ++L +LDL  N+L +      
Sbjct: 183 LRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETTG 242

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYL 329
            L+ LS L L  N L+G+P  +     L +  + GN +  L   L+   N  T   L   
Sbjct: 243 NLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICL--- 299

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLS 388
            SR   N  +      +   T+ T        ++++   ++ IP  I+   + +TKL++ 
Sbjct: 300 -SR--NNFTAYPVGGPQQFATVDT--------INMDHNQINKIPFGIFSRSKYLTKLNMK 348

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP +++S  S+  L L  N+I   P+ I   L+SL  L L NN LR++P+    
Sbjct: 349 DNQLTALPLDVNSWTSMVELNLGTNQISKLPEDI-EHLTSLEVLILSNNLLRRLPTR-IG 406

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           ++  L+ LDL  N + +LP     + L  LQ+L ++  QL + P  I RL  L  L   +
Sbjct: 407 NLSRLRELDLEENRLEALPSE--LAYLKELQKLSVQTNQLTQLPRSIGRLSNLVYLKAGE 464

Query: 508 NSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           N+L S+PE   +L  L +L ++DN N++ LP EL 
Sbjct: 465 NNLASLPEEIGSLEQLQQLYINDNLNLNHLPFELA 499


>gi|379730485|ref|YP_005322681.1| hypothetical protein SGRA_2368 [Saprospira grandis str. Lewin]
 gi|378576096|gb|AFC25097.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 509

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 223/498 (44%), Gaps = 69/498 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L+ S   L ELP  IG    +K L++  N +  +PD + +   L   D S N+L  L
Sbjct: 18  LKKLDASRKGLQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  L +   L     SNN ++ L E+LA   ++ +LD++ N+L  L NN       L +L
Sbjct: 78  PKVLFQLRKLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNN-FGQLKALRKL 136

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN--------- 240
           +  +N L+ +P + G L +L +LDL +N    +P  I    SL +  +  N         
Sbjct: 137 LLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVL 196

Query: 241 --------------ALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSN 284
                          L  +P E+G+L+ L +L L  N+LK    E   C   L  LDL N
Sbjct: 197 GQLSNLEELQAEGLGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCS-ALEQLDLGN 255

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP  + +   L+ L L  NPL         G  P LL+ +++        E   +
Sbjct: 256 NRLERLPLNLARCQQLKVLNLEDNPL---------GELPLLLQEIQAL------EELDMS 300

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             +L+ +   LS               +P+  W       LDLS N +++LP       +
Sbjct: 301 NCNLVDLGAGLS---------------LPALHW-------LDLSANQLRDLPSNFGQLTA 338

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  L L  N+++ WP A L  LS +  L L  N LRQ+      D P L+ LDLS N   
Sbjct: 339 LNWLDLRDNQLQKWPKA-LEGLSQIRQLLLAGNFLRQINLSDL-DWPELEELDLSKN--E 394

Query: 465 LPE-NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           L E +  +  LP L++L L + QL + P D   L  L  LDLS N L S+P+    L  +
Sbjct: 395 LTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQLDSLPQSLAELDQI 454

Query: 524 TELDLSDNNISALPPELV 541
             LDL +N  +  P  L+
Sbjct: 455 QWLDLRNNQFTEFPQALL 472



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 210/436 (48%), Gaps = 29/436 (6%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++L   R    L+LSN  L ++  E+             WE  +L +L L +N ++ L  
Sbjct: 79  KVLFQLRKLRWLDLSNNGLSELGEELAA-----------WE--ELMRLDLKNNQLQALPN 125

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +   L  L  L +  N+LS LPA+ G+L  L+ LD+S N+  ++P+EIG   +L +   S
Sbjct: 126 NFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLS 185

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N + +L   LG+  NL + +A    +  +P+++   + +  L +  N+L  L+  L  +
Sbjct: 186 ANPMPQLTKVLGQLSNLEELQAEGLGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAEL-GN 244

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L +L    N L  +P  +    +L  L+L  N +  +P  +    +L E  M N  L
Sbjct: 245 CSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNPLGELPLLLQEIQALEELDMSNCNL 304

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             L A L  L  L  LDL +NQL++      QL  L+ LDL +N L   P  +  ++ +R
Sbjct: 305 VDLGAGLS-LPALHWLDLSANQLRDLPSNFGQLTALNWLDLRDNQLQKWPKALEGLSQIR 363

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +LLL GN LR +  S ++ P    L      L +NE +E S   + L  +        ++
Sbjct: 364 QLLLAGNFLRQINLSDLDWPELEELD-----LSKNELTELSGQWDKLPQL--------RQ 410

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+LE   L+ +P +      + +LDLS N +  LP  L+    +Q L L  N+  ++P A
Sbjct: 411 LNLEKNQLAQLPEDWRPLSNLEELDLSDNQLDSLPQSLAELDQIQWLDLRNNQFTEFPQA 470

Query: 422 ILTSLSSLSCLKLDNN 437
           +L  +  L  L L  N
Sbjct: 471 LLPLVGQLQALYLGEN 486


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 252/533 (47%), Gaps = 56/533 (10%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S+NL+++ L ++P +V++               +LQ L+L++N +  L   L +L  L +
Sbjct: 99  SINLNSKELTEIPPDVFR-------------CTNLQCLLLSNNFMTHLPTSLCHLSKLEI 145

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L  LP  I  L  L +L+V+ N I  +P EI     + +   ++N+L +LP  
Sbjct: 146 LSLEGNALVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPC 205

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG    L     S N + +LP+  A    +  L+++GN+++ L    +   + L +L  S
Sbjct: 206 LGDLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPK-AVFRLSQLVKLCLS 264

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ IG L  L  L L  N++  +P  +    SL E  + +N L+A+  +L  L
Sbjct: 265 GNQIKSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNL 324

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L + +N L +   + C    +  L L+ N +  LP +I  +  L++L +  N L 
Sbjct: 325 KQLKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALE 384

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L                        D  A      +I  A               NL  
Sbjct: 385 ML-----------------------PDQLAHLNNLSVIVCANN-------------NLLW 408

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           IP E+    +ITKLDLS N + E+P  LSS  SL  L L++N+I +  ++I+ +   L  
Sbjct: 409 IPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQNEIHEIANSIIHN-RKLEH 467

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L+L  N L  V S  F  +  L  LDLS N I S+P     S+L  L EL L   + R  
Sbjct: 468 LELSGNKL-TVFSVHFCGLHNLAYLDLSRNEINSVPS--AISNLESLSELLLHSNKFRRF 524

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P ++  L+ L+ +DLS N ++++P G   L  L  ++LS+N+    P EL SV
Sbjct: 525 PIELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELFSV 577



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 244/501 (48%), Gaps = 25/501 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++++L   +N + +L   L +L  L VL +S N +  LP +   L  L  L++  N I  
Sbjct: 188 NIKQLFANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISA 247

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +   + LVK   S NQ+K LP  +G   NL +   S+N +T LP  L + + + +L
Sbjct: 248 LPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEEL 307

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ NKLT +S+ L  +   L  L  + NLL  + E +     +  L L+ N++  +P+ 
Sbjct: 308 TLDDNKLTAISDKL-QNLKQLKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTK 366

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLS 283
           I    +L E ++  NAL  LP +L  L+ L  +   +N L    +E   C  +++ LDLS
Sbjct: 367 IHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWIPIELKNCN-QITKLDLS 425

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N LS +P  +  MT+L  L L  N +  + +S+++      L++L   L  N+ +  S 
Sbjct: 426 GNKLSEVPQALSSMTSLLYLNLNQNEIHEIANSIIHNRK---LEHL--ELSGNKLTVFSV 480

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
               L  +A         L L    ++++PS I     +++L L  N  +  P EL +  
Sbjct: 481 HFCGLHNLAY--------LDLSRNEINSVPSAISNLESLSELLLHSNKFRRFPIELCALK 532

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY--- 460
           SLQ + LS N+I+  P  I + L  L  + L NN  +  P + F  +  L+ L +S    
Sbjct: 533 SLQKIDLSGNQIETVPSGI-SLLEGLRYVNLSNNSFKVFPRELF-SVSSLETLKISQKDG 590

Query: 461 -NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
             + SLP+    S L +L+EL +    ++  P  I  ++ L  L  + N L  +P    +
Sbjct: 591 RKLISLPDE--LSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPASISS 648

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L +L +L L  N +++LP ++
Sbjct: 649 LAALQQLSLKGNQLTSLPSDI 669



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 215/450 (47%), Gaps = 55/450 (12%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P   GS T++   + +S +L E+P  + RC NL     SNN +T LP  L   SK+  L
Sbjct: 90  VPSGTGSITSI---NLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEIL 146

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +EGN L                          +P  I SLS+L  L+++ N+I  +P  
Sbjct: 147 SLEGNALV------------------------SLPPEICSLSQLTALNVNHNQIAVLPHE 182

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           ISG  ++ + +  NN LS LP  LG L+ L  L +  N +K        L+ L VL+L  
Sbjct: 183 ISGLKNIKQLFANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDG 242

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS- 342
           N +S LP  + +++ L KL L+GN +++L   + +      LK LR   L  N+ +    
Sbjct: 243 NQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGD------LKNLRELSLSSNQLTFLPV 296

Query: 343 -----TTKEDLITMATRLSVTS---------KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                T+ E+L     +L+  S         K LS+    L+ I  ++     I  L L+
Sbjct: 297 QLYNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIANNLLTDITEKVCWCPAIECLKLN 356

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP ++ +  +L+ L + RN ++  PD  L  L++LS +   NN L  +P +  K
Sbjct: 357 GNQMYRLPTKIHNLRNLKELHIERNALEMLPDQ-LAHLNNLSVIVCANNNLLWIPIE-LK 414

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +   +  LDLS N ++ +P+    SS+  L  L L + ++ E    I+  ++L  L+LS 
Sbjct: 415 NCNQITKLDLSGNKLSEVPQ--ALSSMTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSG 472

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           N L      F  L +L  LDLS N I+++P
Sbjct: 473 NKLTVFSVHFCGLHNLAYLDLSRNEINSVP 502



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 218/455 (47%), Gaps = 30/455 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKED 63
           L LS   ++ +P E+   KN  E             + +    L++L L  N +  + + 
Sbjct: 261 LCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDK 320

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L+NL  L VL++++N L+++   +     ++ L ++ N + ++P +I +   L +     
Sbjct: 321 LQNLKQLKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIER 380

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L+ LP  L    NLS    +NN +  +P +L +C++++KLD+ GNKL+ +   L +S 
Sbjct: 381 NALEMLPDQLAHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQAL-SSM 439

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L  L  ++N ++ +  +I    +L  L+L  N++        G  +LA   +  N ++
Sbjct: 440 TSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEIN 499

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ++P+ +  L  L  L LHSN+ + + +E C L+ L  +DLS N +  +P  I  +  LR 
Sbjct: 500 SVPSAISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGLRY 559

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--K 360
           + L+ N  +     L +  +   LK             +      LI++   LS     K
Sbjct: 560 VNLSNNSFKVFPRELFSVSSLETLKI------------SQKDGRKLISLPDELSKLKNLK 607

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL +   N+  +P  I E   + +L  + N +  LP  +SS A+LQ L L  N++   P 
Sbjct: 608 ELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAALQQLSLKGNQLTSLPS 667

Query: 421 AILTSLSSLSCLKLDNNPLRQVPS---DGFKDIPM 452
            I + L  L  + LD+NP+ + PS   DG +  P+
Sbjct: 668 DI-SGLQKLREINLDSNPMLRPPSLLCDGKRLYPI 701


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 228/466 (48%), Gaps = 47/466 (10%)

Query: 4   ILKAARTSG--SLNLSNRSLRDVPNEVYK--NFDEA--GEGDKWWEAVDLQKLILA-HNN 56
           +++ A T G   L+LS + L ++P E+ K    +    G+    +E V  +    A  NN
Sbjct: 9   LIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNN 68

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           ++ L  +L +LP L  L++S N L  +P  + ++  L+ L +    + +IP+ +   T L
Sbjct: 69  LKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNL 128

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            +   S NQ+ E+P +L +  NL+    S N IT +PE LA  + +++L++  N++T + 
Sbjct: 129 TQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIP 188

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
             L A  T LT+L    N    +PE +  L+ L RL+L  N+   IP +++   +L +  
Sbjct: 189 EAL-AKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLI 247

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + +N +  +P  + KL+ L  L L  NQ+KE      +L  L+ L L  N +  +P  I 
Sbjct: 248 LSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIA 307

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+T L +L L GN ++                     +PE             IT  T L
Sbjct: 308 KLTNLTQLGLDGNQIK--------------------EIPE------------AITKLTNL 335

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +     L L G  +  IP  I +   +T+L LS N I E+P  L+   +L  L LS N+I
Sbjct: 336 T----HLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQI 391

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
              P+A L  L++L+ L L  N + Q+P +  + +P L++LDL  N
Sbjct: 392 TQIPEA-LAPLTNLTTLHLRVNQITQIP-EAIESLPKLELLDLRGN 435



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 205/432 (47%), Gaps = 70/432 (16%)

Query: 36  GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           G  D   + + L++LIL    + ++ E L  L  LT L +S N+++E+P A+ +L  L  
Sbjct: 94  GIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQ 153

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L++S+N I +IP+ +   T L + + S NQ+ E+P +L +  NL+      N  T +PE 
Sbjct: 154 LNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEA 213

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA  + +++L++  N+ T +   L A  T LT+LI S N +  +PETI  L+ L  L L 
Sbjct: 214 LAKLTNLTRLNLSYNQRTEIPEAL-AKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILS 272

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N+I  IP +I+   +L +  +  N +  +P  + KL+ L  L L  NQ+KE        
Sbjct: 273 GNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKE-------- 324

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
                         +P  I K+T L  L+L+GN ++ +  ++                  
Sbjct: 325 --------------IPEAITKLTNLTHLILSGNQIKEIPETIAK---------------- 354

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                        +T  T+L+++S +       ++ IP  + +   +T+L LS N I ++
Sbjct: 355 -------------LTNLTQLALSSNQ-------ITEIPEVLAQLTNLTQLFLSSNQITQI 394

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  L+   +L TL L  N+I   P+AI  SL  L  L L  NPL   P          +I
Sbjct: 395 PEALAPLTNLTTLHLRVNQITQIPEAI-ESLPKLELLDLRGNPLPISP----------EI 443

Query: 456 LDLSYNIASLPE 467
           L   Y + S+ E
Sbjct: 444 LGSVYQVGSVEE 455



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 224/490 (45%), Gaps = 82/490 (16%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL----------DVSF--------NSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL           V +        N++  +P E+ S  
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELLSLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       +T +PE LA                 
Sbjct: 81  NLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKL--------------- 125

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                    T LT+LI S N +  +PE +  L+ L +L+L  N+I  IP +++   +L +
Sbjct: 126 ---------TNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQ 176

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             +  N ++ +P  L KL+ L  L+L  NQ  E      +L  L+ L+LS N  + +P  
Sbjct: 177 LNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEA 236

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           + K+T L +L+L+ N ++                     +PE              T+A 
Sbjct: 237 LAKLTNLTQLILSDNQIK--------------------EIPE--------------TIAK 262

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
             ++T   L L G  +  IP  I +   +T+L L  N I+E+P  ++   +L  L L  N
Sbjct: 263 LTNLT--HLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGN 320

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           +IK+ P+AI T L++L+ L L  N ++++P    K   + Q+   S  I  +PE    + 
Sbjct: 321 QIKEIPEAI-TKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPE--VLAQ 377

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +L +L+L   Q+ + P  +  L  L  L L  N +  IPE  ++L  L  LDL  N +
Sbjct: 378 LTNLTQLFLSSNQITQIPEALAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPL 437

Query: 534 SALPPELVSV 543
              P  L SV
Sbjct: 438 PISPEILGSV 447



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 201/442 (45%), Gaps = 82/442 (18%)

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDF------------------KASNNCITSLPEDLADC 159
           + D S  +L ELP  +G+   L                     KA  N + +LP +L   
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELLSL 79

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             + KLD+ GN L  + + ++     L ELI  +  L  +PE +  L+ L +L L  N+I
Sbjct: 80  PNLRKLDISGNPLEGIPD-VVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQI 138

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             IP +++   +L +  +  N ++ +P  L KL+ L  L+L  NQ+ E            
Sbjct: 139 TEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITE------------ 186

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
                     +P  + K+T L +L L GN                     R+ +PE    
Sbjct: 187 ----------IPEALAKLTNLTQLNLRGNQ--------------------RTEIPE---- 212

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             +  K   +T  TRL+++  + +        IP  + +   +T+L LS N I+E+P  +
Sbjct: 213 --ALAK---LTNLTRLNLSYNQRT-------EIPEALAKLTNLTQLILSDNQIKEIPETI 260

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +   +L  LILS N+IK+ P+ I   L++L+ L LD N ++++P +    +  L  L L 
Sbjct: 261 AKLTNLTHLILSGNQIKEIPETI-AKLTNLTQLGLDGNQIKEIP-EAIAKLTNLTQLGLD 318

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N I  +PE    + L +L  L L   Q++E P  I +L  L  L LS N +  IPE   
Sbjct: 319 GNQIKEIPE--AITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLA 376

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            LT+LT+L LS N I+ +P  L
Sbjct: 377 QLTNLTQLFLSSNQITQIPEAL 398



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 21/178 (11%)

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSR------------------NKIKDWPDAILTS 425
           +LDLS   + ELP E+     L++LIL +                  N +K  P  +L S
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELL-S 78

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L +L  L +  NPL  +P    + + + +++ +   +  +PE    + L +L +L L   
Sbjct: 79  LPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPE--ALAKLTNLTQLILSDN 136

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           Q+ E P  + +L  L  L+LS N +  IPE    LT+LT+L+LS N I+ +P  L  +
Sbjct: 137 QITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKL 194



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 70/260 (26%)

Query: 344 TKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEIT------------------- 383
           T+++L+ +  + +    +EL L G  L+ +P EI +  ++                    
Sbjct: 2   TQDELLVLIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIF 61

Query: 384 ----------------------KLDLSRNSIQELP----------------------PE- 398
                                 KLD+S N ++ +P                      PE 
Sbjct: 62  QKALGNNLKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEA 121

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           L+   +L  LILS N+I + P+A L  L++L+ L L  N + ++P +    +  L  L+L
Sbjct: 122 LAKLTNLTQLILSDNQITEIPEA-LAKLTNLTQLNLSYNQITEIP-EALAKLTNLTQLNL 179

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           SYN I  +PE    + L +L +L LR  Q  E P  + +L  L  L+LS N    IPE  
Sbjct: 180 SYNQITEIPE--ALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEAL 237

Query: 518 KNLTSLTELDLSDNNISALP 537
             LT+LT+L LSDN I  +P
Sbjct: 238 AKLTNLTQLILSDNQIKEIP 257


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 231/495 (46%), Gaps = 48/495 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L+N   + VLN+S  +L+ LP  IG+L  L+ L + +N ++ IP EIG    L   
Sbjct: 32  LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTL 91

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   NQL   P  +     L     S N +  LP ++     +  L +  NKLT L    
Sbjct: 92  DLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKE- 150

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I    +L    + +
Sbjct: 151 IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRD 210

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+  P EIG++ 
Sbjct: 211 NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQ 270

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L L  NPL       +    P     LR    +      +  +E+ + +   LS+ 
Sbjct: 271 NLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVL-ELSIA 329

Query: 359 SKELS-------LEGMNLSA----------IPSEIWEA--------------------GE 381
            K  S       L+  NL +          +P EI                       G+
Sbjct: 330 YKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQ 389

Query: 382 ITK---LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           +     L+L  N ++ LP E++   +L TL L +NK+K +P  IL  L  L  L L  N 
Sbjct: 390 LRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEIL-QLGKLQKLDLSANE 448

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L+ +P +  + +  LQ LDLS+N +  LP+    + L +LQEL+L   QL   P++I  L
Sbjct: 449 LKILPEE-LERLQNLQELDLSHNQLTILPKE--IAKLQNLQELHLNGNQLTTLPSEIGFL 505

Query: 498 QQLRILDLSQNSLQS 512
           ++L+IL L QN   S
Sbjct: 506 KKLKILRLYQNEFSS 520



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 226/538 (42%), Gaps = 78/538 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV----------DLQKLILAHNNIEKLK 61
           LNLS + L  +P E+   +N  E     +W + +          +LQ L L  N +    
Sbjct: 45  LNLSGQELATLPKEIGQLQNLQELY--LQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFP 102

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L +L++S N+L  LPA IG L  L+SL +  N +  +P EIG    L +   
Sbjct: 103 KEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWS 162

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L  LP  +G+  NL     +NN +T+LP+++     +  LD+  N+L +L      
Sbjct: 163 PGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIIL------ 216

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG L  L  L+L  NR+ + P  I    +L    + NN 
Sbjct: 217 ------------------PKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNR 258

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L+  P E+G+L  L  L+L  N L      + + R  +  L  NS   L  E+ K     
Sbjct: 259 LTTFPKEIGQLQNLRDLELLINPL------SLKERKRIQKLFPNSNLDL-REVAKDGVYH 311

Query: 302 KL-LLTGNPLRTLRSSLVNGPTPALL--KYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L L    PL+ L  S+       L   + L+ R                          
Sbjct: 312 NLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFR-------------------------N 346

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            + L L       +P EI     +  L L  N +  LP  +    +L+ L L  N ++  
Sbjct: 347 LQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESL 406

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P  I   L +L  L+L  N L+  P +  + +  LQ LDLS N +  LPE      L +L
Sbjct: 407 PKEI-ARLRNLHTLRLHQNKLKTFPKEILQ-LGKLQKLDLSANELKILPEE--LERLQNL 462

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           QEL L   QL   P +I +LQ L+ L L+ N L ++P     L  L  L L  N  S+
Sbjct: 463 QELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEIGFLKKLKILRLYQNEFSS 520


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 163/296 (55%), Gaps = 3/296 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L++  +  N +  L  ++  L  L  LN+SHN+LS LPA IG+L  L+SLD+SFN + 
Sbjct: 76  AQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLS 135

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L   + S N+L  LP+ +G+   L      NN ++SLP ++   +K+  
Sbjct: 136 SLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQT 195

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+ L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S+P+
Sbjct: 196 LDLYNNQLSSLPAE-IGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPA 254

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L   ++ +N LS+LPAE+ +L+ L +LDL  N+L     E  QL +L  L+L 
Sbjct: 255 EIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEIGQLTKLQFLNLK 314

Query: 284 NNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            N L+ LP EIG + + LR+L L  N L +    +++  T A+L + + +L +  D
Sbjct: 315 GNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAILNFYKQQLEQTID 370



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 184/357 (51%), Gaps = 31/357 (8%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL---DVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L++S N+L+ LP  IG+L  LK L      ++   +I   IG            N+L +L
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIG------------NKLSKL 68

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G    L +F    N ++SLP ++   +K+  L++  N+L+ L    I   T L  L
Sbjct: 69  PREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAE-IGQLTKLQSL 127

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L+ +P  IG L++L  L+L  NR+ S+P+ I     L    + NN LS+LPAE+
Sbjct: 128 DLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEI 187

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L+KL TLDL++NQL     E  QL +L  LDL NN LS LP EIG++T L+ L L+ N
Sbjct: 188 GQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHN 247

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +V       L    ++L        S+   +++ +    S     L L    
Sbjct: 248 KLSSLPAEIVQLTNLQFLHLSHNKL--------SSLPAEIVQLTNLQS-----LDLSHNK 294

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDWPDAILT 424
           LS++P+EI +  ++  L+L  N +  LP E+    S L+ L L  N ++  P  IL+
Sbjct: 295 LSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILS 351



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 188/381 (49%), Gaps = 53/381 (13%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+ GN+LTVL    I   T L  LI  K   +     +G++          N++  +P 
Sbjct: 21  LDLSGNELTVLPPE-IGKLTQLKRLILGKYRYDDKGRIVGTIG---------NKLSKLPR 70

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I     L EF++  N LS+LPAE+G+L+KL +L+L  N+L     E  QL +L  LDLS
Sbjct: 71  EIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLS 130

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N LS LP EIG++  L+ L L+ N L +L         PA +  L              
Sbjct: 131 FNQLSSLPAEIGQLAKLQSLNLSHNRLSSL---------PAEIGQL-------------- 167

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L      L L    LS++P+EI +  ++  LDL  N +  LP E+    
Sbjct: 168 ---------TKLQT----LDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLT 214

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
            LQTL L  N++   P A +  L++L  L L +N L  +P++    +  LQ L LS+N +
Sbjct: 215 KLQTLDLYNNQLSSLP-AEIGQLTNLQFLHLSHNKLSSLPAE-IVQLTNLQFLHLSHNKL 272

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
           +SLP       L +LQ L L   +L   P +I +L +L+ L+L  N L S+P    +L S
Sbjct: 273 SSLP--AEIVQLTNLQSLDLSHNKLSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYS 330

Query: 523 -LTELDLSDNNISALPPELVS 542
            L EL L  N + + PPE++S
Sbjct: 331 CLRELKLDSNLLESPPPEILS 351



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 27/265 (10%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS N L+ LPPEIGK+T L++L+L G      +  +V      L     S+LP     
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLIL-GKYRYDDKGRIVGTIGNKL-----SKLPRE--- 71

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                    I +  +L    +E  +    LS++P+EI +  ++  L+LS N +  LP E+
Sbjct: 72  ---------IGLLAQL----EEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEI 118

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
                LQ+L LS N++   P A +  L+ L  L L +N L  +P++    +  LQ LDL 
Sbjct: 119 GQLTKLQSLDLSFNQLSSLP-AEIGQLAKLQSLNLSHNRLSSLPAE-IGQLTKLQTLDLY 176

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N ++SLP       L  LQ L L   QL   P +I +L +L+ LDL  N L S+P    
Sbjct: 177 NNQLSSLP--AEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIG 234

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
            LT+L  L LS N +S+LP E+V +
Sbjct: 235 QLTNLQFLHLSHNKLSSLPAEIVQL 259


>gi|21358045|ref|NP_650306.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|5911290|gb|AAD55737.1|AF184226_1 BcDNA.GH09045 [Drosophila melanogaster]
 gi|7299797|gb|AAF54976.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|220952870|gb|ACL88978.1| CG9611-PB [synthetic construct]
          Length = 650

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 258/603 (42%), Gaps = 122/603 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 395 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 452

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQT-LILSRNKIKDW 418
           ++    L+++P ++++      +  +D +RN +  LP  L     L T L+LS N I   
Sbjct: 453 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYV 512

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I +  + +S L L NN L  +P++                         F  L  L+
Sbjct: 513 PQFI-SQFTRISFLNLSNNLLNDLPTE-------------------------FGVLNTLR 546

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALP 537
           EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  L+ LDL +N+I  +P
Sbjct: 547 ELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVP 606

Query: 538 PEL 540
           P L
Sbjct: 607 PIL 609



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 322 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 382 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 441

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 442 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 501

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 502 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 561

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 562 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 621

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 622 GNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 539 ELVSV 543
           +LV++
Sbjct: 246 DLVNM 250


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 201/425 (47%), Gaps = 43/425 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L   + ++NQL  LP 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL   + +NN + +LP+++     +  L++  N+L  L    I     L  L  
Sbjct: 110 EIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKE-IGQLKNLQWLNL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L     L L +NR+ ++P  I    +L E Y+  N  +A P E+G+
Sbjct: 169 VTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++  L+ L L  N L
Sbjct: 229 LKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL         P  +  L++                       L V    L L      
Sbjct: 289 KTL---------PKEIGQLKN-----------------------LQV----LDLNNNQFK 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI +   +  LDL  N  + +  E+    +LQ L L+ N++K    A +  L +L 
Sbjct: 313 TVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTL-SAEIGQLKNLQ 371

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L+ N L  +P++  + +  L+ L LSYN + +L        L +L++L LR  QL  
Sbjct: 372 MLSLNANQLTTLPNE-IRQLKNLRELHLSYNQLKTLS--AEIGQLKNLKKLSLRDNQLTT 428

Query: 490 APTDI 494
            P +I
Sbjct: 429 LPKEI 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 199/401 (49%), Gaps = 36/401 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L+++ N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L   + ++NQL  LP  +G+  NL   + +NN + +LP+++     +  
Sbjct: 106 TLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQW 165

Query: 165 LDVEGNKLT---------------VLSNNL-------IASWTMLTELIASKNLLNGMPET 202
           L++  N+LT               VLS N        I     L EL  + N     P+ 
Sbjct: 166 LNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKE 225

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+L  L  LDL+ 
Sbjct: 226 IGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 285

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQLK    E  QL+ L VLDL+NN    +P EIG++  L+ L L  N  +T+   +    
Sbjct: 286 NQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEI---- 341

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               LK L+     N   +  + +   I     L +    LSL    L+ +P+EI +   
Sbjct: 342 --GQLKNLQMLFLNNNQLKTLSAE---IGQLKNLQM----LSLNANQLTTLPNEIRQLKN 392

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           + +L LS N ++ L  E+    +L+ L L  N++   P  I
Sbjct: 393 LRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 205/450 (45%), Gaps = 66/450 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L   + ++NQL  LP  +G+  NL   + +NN + +L
Sbjct: 48  VRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  L++  N+L  L                        P+ IG L  L  L
Sbjct: 108 PKEIGQLKNLQVLELNNNQLATL------------------------PKEIGQLKNLQVL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L+ N++ ++P  I    +L    +  N L+ LP E+G+L    TL L  N+L     E 
Sbjct: 144 ELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L+ N  +  P EIG++  L++L L  N L+TL + +        L+ LR 
Sbjct: 204 GQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEI------GQLQNLR- 256

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                        EL L    L  + +EI +   +  LDL+ N 
Sbjct: 257 -----------------------------ELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQ 287

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ LP E+    +LQ L L+ N+ K  P+ I   L +L  L L  N  + V S+    + 
Sbjct: 288 LKTLPKEIGQLKNLQVLDLNNNQFKTVPEEI-GQLKNLQVLDLGYNQFKTV-SEEIGQLK 345

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            LQ+L L+ N + +L        L +LQ L L   QL   P +I +L+ LR L LS N L
Sbjct: 346 NLQMLFLNNNQLKTLS--AEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQL 403

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +++      L +L +L L DN ++ LP E+
Sbjct: 404 KTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 231/517 (44%), Gaps = 73/517 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTIL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+  P E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  NPL  
Sbjct: 256 NLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSL 315

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-A 371
                +    P       S L   E +E    +   + +A    +   ELSLE  + S +
Sbjct: 316 KERKRIQKLFPD------SNLDLREVAENGVYRN--LNLAQEEPLKVFELSLEYKDFSQS 367

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            P  I +   +  L+L       LP E+S   +L+ L L  N +K+ P  I   L +L  
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEI-GQLKNLEA 426

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L+ N L ++P +                            L +LQ+L L +  L+  P
Sbjct: 427 LNLEANELERLPKE-------------------------IGQLRNLQKLSLHQNTLKIFP 461

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
            +I +L++L+ LDLS N   + P+    L +L  L+L
Sbjct: 462 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 28/272 (10%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN----------------LLTVLPKEIG 91

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 389
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 92  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTILPKE-IGQ 207

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ L+LS N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L +L  L+L +N ++  P E+
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPKE--IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPK 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  L+LSDN ++ LP E+
Sbjct: 204 EIGQLQNLQTLNLSDNQLATLPVEI 228


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 222/455 (48%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK                L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTSLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N ++++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +L +  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L +L LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                DL           ++
Sbjct: 481 VLDLEENKIESL---------PNEIGFLR----------------DL-----------QK 504

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   ++++P  I     +T L +  N++  LP E+ +  +L +L ++ N  + + P 
Sbjct: 505 LILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPF 564

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL Q+P +     P L I
Sbjct: 565 E-LALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 216/453 (47%), Gaps = 28/453 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +SI  +P  +   T LV+F    N+L  LP  +G   NL     S N +TSLP  
Sbjct: 134 LDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSLPNT 193

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +   +  LD+  NKL+ +  +++   T LT L    N +  + + I +L+ L  L L 
Sbjct: 194 LENLKSLRVLDLRHNKLSEIP-DVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLR 252

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +       L
Sbjct: 253 ENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNL 312

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  +     + +  + GN +      L +SL +  T  L +   
Sbjct: 313 ISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAF 372

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSR 389
           +  P    ++ +                   ++LE   +  IP  I+  A  +TKL++  
Sbjct: 373 TAYPSGGPAQFTNV---------------YSINLEHNKIDKIPYGIFSRAKNLTKLNMKE 417

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP ++ +  ++  L L  N++   PD I   L SL  L L NN L+++P+    +
Sbjct: 418 NQLTALPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQSLEILILSNNLLKRIPA-SIAN 475

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N
Sbjct: 476 LRKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGEN 533

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           +L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 534 NLNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 566



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 65/453 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKLSE+P  + +L  L +L + FN +  
Sbjct: 176 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRY 235

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N++KELP+ +G+ +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 236 VSDNIRNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTL 295

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG+L  L RL L  NR+ +IP S
Sbjct: 296 DLQHNELL------------------------DIPDTIGNLISLTRLGLRYNRLSNIPKS 331

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  ++L
Sbjct: 332 LANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINL 391

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            +N +  +P  I  +   L KL +  N L  L         P  +    + +  N  +  
Sbjct: 392 EHNKIDKIPYGIFSRAKNLTKLNMKENQLTAL---------PLDIGTWVNMVELNLGTNQ 442

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            T   D I     L +    L L    L  IP+ I    ++  LDL  N I+ LP E+  
Sbjct: 443 LTKIPDDIQCLQSLEI----LILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGF 498

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y 
Sbjct: 499 LRDLQKLILQSNQVTSLPRAI-GHLTNLTYLSVGENNLNYLP----EEIGTLENLDSLYV 553

Query: 461 ----NIASLP--------------ENPPFSSLP 475
               N+ +LP              EN P S +P
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIP 586



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 161/353 (45%), Gaps = 25/353 (7%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           + RLDL ++ I ++PS++     L EFY+  N L  LP E+G L+ L TL L  N L   
Sbjct: 131 VTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSL 190

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L+ L VLDL +N LS +P  + K+T+L  L L  N +R +  ++ N     +L 
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLS 250

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSA 371
                L EN+  E       L+ + T   V+   L                 L+   L  
Sbjct: 251 -----LRENKIKELPAGIGKLVNLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLD 304

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           IP  I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ 
Sbjct: 305 IPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTT 364

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           + L  N     PS G      +  ++L +N I  +P    FS   +L +L ++  QL   
Sbjct: 365 ITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGI-FSRAKNLTKLNMKENQLTAL 423

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P DI     +  L+L  N L  IP+  + L SL  L LS+N +  +P  + ++
Sbjct: 424 PLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANL 476



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 170/382 (44%), Gaps = 43/382 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           +T L  SK+ +  +P T+  L+ L+   L+ N+++++P  I    +L    +  N+L++L
Sbjct: 131 VTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSL 190

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  L  L  L  LDL  N+L E      +L  L+ L L  N +  +   I  +T L  L 
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLS 250

Query: 305 LTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           L  N ++ L +    LVN  T  +       LPE             I    +LS     
Sbjct: 251 LRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEE------------IGNCVQLST---- 294

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L+   L  IP  I     +T+L L  N +  +P  L++C  +    +  N++   PD 
Sbjct: 295 LDLQHNELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDG 354

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN----- 468
           +L SLS L+ + L  N     PS G   F ++  +     +I  + Y I S  +N     
Sbjct: 355 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLN 414

Query: 469 ---PPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
                 ++LP       ++ EL L   QL + P DI  LQ L IL LS N L+ IP    
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIA 474

Query: 519 NLTSLTELDLSDNNISALPPEL 540
           NL  L  LDL +N I +LP E+
Sbjct: 475 NLRKLRVLDLEENKIESLPNEI 496


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 211/451 (46%), Gaps = 53/451 (11%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++ D A +       +D++ L L  + +  L +++  L  L  LN+ +N+L+ LP 
Sbjct: 24  NKVYRDLDAALKN-----PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPN 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG+L  L+ L +  N +  +P E+G+   L + +  +NQL  LP+ +G+  NL      
Sbjct: 79  EIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLH 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + SLP+++    K+ +L + GN+L  L    I +   L EL  S++ L   PE IG 
Sbjct: 139 NNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQE-IETLQDLEELHLSRDQLKTFPEEIGK 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L RL L  N+++ +   I    SL    + NN L+ LP E+GKL  L  L+L +NQL
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E   L  L  L L +N    LP +I ++  L+ L L  N L  L   +  G    
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEI--GKLEK 315

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L                    EDL     +L+   KE              IW+  ++  
Sbjct: 316 L--------------------EDLYLEDNQLTTLPKE--------------IWKLEKLKY 341

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           LDL+ N ++ LP E+     L+ L LS N+++  P  I   L  L  L L NN L  +P 
Sbjct: 342 LDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKI-GKLEKLKYLDLSNNQLATLPK 400

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           +  K +  L+ LDLS N        PF++ P
Sbjct: 401 EIGK-LEKLEDLDLSGN--------PFTTFP 422



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 181/410 (44%), Gaps = 72/410 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L  +PNE+              +  +LQ L L +N +  L +++  L  L  
Sbjct: 65  ELNLENNQLATLPNEI-------------GQLENLQVLSLYNNRLRTLPQEVGTLQNLRE 111

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +     NQL+ LP  
Sbjct: 112 LNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQE 171

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--------------- 177
           +    +L +   S + + + PE++     + +L ++ N+L VLS                
Sbjct: 172 IETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILEN 231

Query: 178 -------NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                  N I     L EL  S N L  +P+ IG+L  L  L L+ N+  ++P  I    
Sbjct: 232 NQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQ 291

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L + ++ +N L+ LP E+GKL KL  L L  NQL     E  +L +L  LDL+NN L  
Sbjct: 292 NLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRL 351

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIGK+  L+ L L+ N LR L   +  G    L                        
Sbjct: 352 LPEEIGKLEKLKYLDLSNNQLRLLPQKI--GKLEKL------------------------ 385

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                     K L L    L+ +P EI +  ++  LDLS N     P E+
Sbjct: 386 ----------KYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 425



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 197/393 (50%), Gaps = 20/393 (5%)

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
             K D E NK+    +  + +   +  L  +++ L  + + +G+L  L  L+L  N++ +
Sbjct: 16  FYKCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLAT 75

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    +L    + NN L  LP E+G L  L  L+L +NQL        QL  L VL
Sbjct: 76  LPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVL 135

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENE 337
           +L NN L  LP EIGK+  L++L L GN LRTL   +        L   R +L   PE  
Sbjct: 136 NLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEI 195

Query: 338 DSEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLS 388
               S  +  LI  + +L V S+E+          LE   L+ +P+EI +   + +L+LS
Sbjct: 196 GKLRSLKR--LILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLS 253

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP E+ +  +LQ L L  N+ +  P  I   L +L  L L +N L  +P +  K
Sbjct: 254 NNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQI-WQLQNLQDLHLAHNQLTVLPQEIGK 312

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  L+ L L  N + +LP+      L  L+ L L   QLR  P +I +L++L+ LDLS 
Sbjct: 313 -LEKLEDLYLEDNQLTTLPK--EIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSN 369

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N L+ +P+    L  L  LDLS+N ++ LP E+
Sbjct: 370 NQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEI 402



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 22/294 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L+  P E+ K                L++LIL  N +  L +++  L  L  
Sbjct: 180 ELHLSRDQLKTFPEEIGK-------------LRSLKRLILDSNQLVVLSQEIGKLRSLER 226

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S N ++ +P EIG+   L      SNQ + LP  
Sbjct: 227 LILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQ 286

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELI 190
           + +  NL D   ++N +T LP+++    K+  L +E N+LT L   +   W +  L  L 
Sbjct: 287 IWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEI---WKLEKLKYLD 343

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + N L  +PE IG L +L  LDL  N++  +P  I     L    + NN L+ LP E+G
Sbjct: 344 LANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIG 403

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           KL KL  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 404 KLEKLEDLDLSGNPFTTFPKEIVGLKHLKILKLKN----IPALLSERETIRKLL 453


>gi|220942590|gb|ACL83838.1| CG9611-PB [synthetic construct]
          Length = 651

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 258/603 (42%), Gaps = 122/603 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 395 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 452

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQT-LILSRNKIKDW 418
           ++    L+++P ++++      +  +D +RN +  LP  L     L T L+LS N I   
Sbjct: 453 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYV 512

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I +  + +S L L NN L  +P++                         F  L  L+
Sbjct: 513 PQFI-SQFTRISFLNLSNNLLNDLPTE-------------------------FGVLNTLR 546

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALP 537
           EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  L+ LDL +N+I  +P
Sbjct: 547 ELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVP 606

Query: 538 PEL 540
           P L
Sbjct: 607 PIL 609



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 322 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 382 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 441

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 442 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 501

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 502 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 561

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 562 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 621

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 622 GNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 539 ELVSV 543
           +LV++
Sbjct: 246 DLVNM 250


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 184/356 (51%), Gaps = 38/356 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L+ LD++ N +  +P EIG  T+LVKF    N+L  +P+ +G+  +L   
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWL 258

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S+N + S+P D+   + +  L + GN+LT +    I   T L  L    N L  +P  
Sbjct: 259 DLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAE-IWQLTSLKVLGLRGNQLTSVPAE 317

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L  L+L+ N++ S+P+ I    SL   ++G N L+++PAE+G+L+ L  L+L++
Sbjct: 318 IGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNN 377

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL  L  L L  N L+ +P EIG++T+L+ L L GN L ++        
Sbjct: 378 NQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSV-------- 429

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            PA +  L                       T L+    ELSL+   L ++P+EI +   
Sbjct: 430 -PAEIGQL-----------------------TALT----ELSLQRNKLKSVPAEIGQLAT 461

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           + +L L+ N +  +P E+    +L +L L RN++   P AI    ++   ++LD+ 
Sbjct: 462 LKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTSVPAAIRELRAAGFYVQLDDG 517



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  ++  L  L    +  N+L+ +PA IG+L  L+ LD+S N +  +
Sbjct: 209 LRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLASV 268

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG  T+L     + NQL  +P+ + +  +L       N +TS+P ++   + +S+L+
Sbjct: 269 PADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELN 328

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I   T L  L    N L  +P  IG L+ L  L+L+ N++ S+P+ I
Sbjct: 329 LNNNQLTSVPAE-IWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEI 387

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   ++G N L+++PAE+G+L+ L  L L+ NQL     E  QL  L+ L L  N
Sbjct: 388 WQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRN 447

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  +P EIG++ TL++L L  N
Sbjct: 448 KLKSVPAEIGQLATLKELWLNDN 470



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 173/371 (46%), Gaps = 64/371 (17%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++P ++   + + +LD+ GN+LT +    I   T L +     N L  +P  IG L+ L 
Sbjct: 198 AVPAEVGRLTALRELDLNGNQLTSVPVE-IGQLTSLVKFGLGGNELTSVPAEIGQLTSLQ 256

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LDL  NR+ S+P+ I    SL    +  N L+++PAE+ +L+ L  L L  NQL     
Sbjct: 257 WLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPA 316

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL  LS L+L+NN L+ +P EI ++T+LR L L GN L ++         PA +  L
Sbjct: 317 EIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSV---------PAEIGRL 367

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                                  T LS    EL+L    L+++P+EIW+   +  L L  
Sbjct: 368 -----------------------TSLS----ELNLNNNQLTSVPAEIWQLTSLRGLFLGG 400

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  +P E+    SL+ L L  N++   P A +  L++L+ L L  N L+ VP++    
Sbjct: 401 NRLTSVPAEIGRLTSLKGLALYGNQLTSVP-AEIGQLTALTELSLQRNKLKSVPAE---- 455

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
                                   L  L+EL+L    L   P +I +L+ L  L+L +N 
Sbjct: 456 ---------------------IGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNR 494

Query: 510 LQSIPEGFKNL 520
           L S+P   + L
Sbjct: 495 LTSVPAAIREL 505



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 61/347 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G L+ L  LDL+ N++ S+P  I    SL +F +G N L+++PAE+G+L+
Sbjct: 194 GLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLT 253

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L                        LDLS+N L+ +P +IG++T+L  L L GN L ++
Sbjct: 254 SL----------------------QWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSV 291

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    PA +  L S                            K L L G  L+++P
Sbjct: 292 ---------PAEIWQLTSL---------------------------KVLGLRGNQLTSVP 315

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   +++L+L+ N +  +P E+    SL+ L L  N++   P A +  L+SLS L 
Sbjct: 316 AEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVP-AEIGRLTSLSELN 374

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L+NN L  VP++ ++   +  +      + S+P       L  L+ L L   QL   P +
Sbjct: 375 LNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAE--IGRLTSLKGLALYGNQLTSVPAE 432

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I +L  L  L L +N L+S+P     L +L EL L+DN ++++P E+
Sbjct: 433 IGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEI 479



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 14/263 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  VP ++              +   L+ L L  N +  +  ++  L  L VL
Sbjct: 258 LDLSDNRLASVPADIG-------------QLTSLEGLGLNGNQLTSVPAEIWQLTSLKVL 304

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L  L+++ N +  +P EI   T+L       N+L  +P+ +
Sbjct: 305 GLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  +LS+   +NN +TS+P ++   + +  L + GN+LT +    I   T L  L    
Sbjct: 365 GRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAE-IGRLTSLKGLALYG 423

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L +N++ S+P+ I    +L E ++ +N L+++PAE+G+L 
Sbjct: 424 NQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLR 483

Query: 254 KLGTLDLHSNQLKEYCVEACQLR 276
            L +L+L  N+L        +LR
Sbjct: 484 ALTSLNLDRNRLTSVPAAIRELR 506



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 14/244 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L+   L  VP E+             W+   L+ L L  N +  +  ++  L  L+ 
Sbjct: 280 GLGLNGNQLTSVPAEI-------------WQLTSLKVLGLRGNQLTSVPAEIGQLTSLSE 326

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++N+L+ +PA I +L  L+ L +  N +  +P EIG  T+L + + ++NQL  +P+ 
Sbjct: 327 LNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAE 386

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  +L       N +TS+P ++   + +  L + GN+LT +    I   T LTEL   
Sbjct: 387 IWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAE-IGQLTALTELSLQ 445

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P  IG L+ L  L L+ N + S+P+ I    +L    +  N L+++PA + +L
Sbjct: 446 RNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTSVPAAIREL 505

Query: 253 SKLG 256
              G
Sbjct: 506 RAAG 509


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 231/495 (46%), Gaps = 48/495 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L+N   + VLN+S  +L+ LP  IG+L  L+ L + +N ++ IP EIG    L   
Sbjct: 34  LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   NQL   P  +     L     S N +  LP ++     +  L +  NKLT L    
Sbjct: 94  DLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKE- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I    +L    + +
Sbjct: 153 IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRD 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+  P EIG++ 
Sbjct: 213 NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQ 272

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L L  NPL       +    P     LR    +      +  +E+ + +   LS+ 
Sbjct: 273 NLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVL-ELSIA 331

Query: 359 SKELS-------LEGMNLSA----------IPSEIWEA--------------------GE 381
            K  S       L+  NL +          +P EI                       G+
Sbjct: 332 YKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQ 391

Query: 382 ITK---LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           +     L+L  N ++ LP E++   +L TL L +NK+K +P  IL  L  L  L L  N 
Sbjct: 392 LRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEIL-QLGKLQKLDLSANE 450

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L+ +P +  + +  LQ LDLS+N +  LP+    + L +LQEL+L   QL   P++I  L
Sbjct: 451 LKILP-EKLERLQNLQELDLSHNQLTILPKE--IAKLQNLQELHLNGNQLTTLPSEIGFL 507

Query: 498 QQLRILDLSQNSLQS 512
           ++L+IL L QN   S
Sbjct: 508 KKLKILRLYQNEFSS 522



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 226/538 (42%), Gaps = 78/538 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV----------DLQKLILAHNNIEKLK 61
           LNLS + L  +P E+   +N  E     +W + +          +LQ L L  N +    
Sbjct: 47  LNLSGQELATLPKEIGQLQNLQELY--LQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFP 104

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L +L++S N+L  LPA IG L  L+SL +  N +  +P EIG    L +   
Sbjct: 105 KEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWS 164

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L  LP  +G+  NL     +NN +T+LP+++     +  LD+  N+L +L      
Sbjct: 165 PGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIIL------ 218

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG L  L  L+L  NR+ + P  I    +L    + NN 
Sbjct: 219 ------------------PKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNR 260

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L+  P E+G+L  L  L+L  N L      + + R  +  L  NS   L  E+ K     
Sbjct: 261 LTTFPKEIGQLQNLRDLELLINPL------SLKERKRIQKLFPNSNLDL-REVAKDGVYH 313

Query: 302 KL-LLTGNPLRTLRSSLVNGPTPALL--KYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L L    PL+ L  S+       L   + L+ R                          
Sbjct: 314 NLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFR-------------------------N 348

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            + L L       +P EI     +  L L  N +  LP  +    +L+ L L  N ++  
Sbjct: 349 LQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESL 408

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P  I   L +L  L+L  N L+  P +  + +  LQ LDLS N +  LPE      L +L
Sbjct: 409 PKEI-ARLRNLHTLRLHQNKLKTFPKEILQ-LGKLQKLDLSANELKILPEK--LERLQNL 464

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           QEL L   QL   P +I +LQ L+ L L+ N L ++P     L  L  L L  N  S+
Sbjct: 465 QELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEIGFLKKLKILRLYQNEFSS 522


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 160/301 (53%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +PNE+              +  +LQ+L L++N ++ L +++  L  L VL
Sbjct: 49  LDLSQQKLKTLPNEI-------------EQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L  LP  I +L  L+ L +S+N +  +P EI     L +     NQL  LP+ +
Sbjct: 96  ELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL   +  NN + +LPE++     +  L++  N+LT L N  I     L EL    
Sbjct: 156 GQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNE-IGQLQNLQELYLGS 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L +L  L L  NR+ ++P+ I    +L + Y+G+N L+ LP E+G+L 
Sbjct: 215 NQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 274

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L TL L SN+L     +  QL+ L  LDL NN L+  P EI ++  L+ L L  N L T
Sbjct: 275 NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT 334

Query: 313 L 313
           L
Sbjct: 335 L 335



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DLQ+L L++N ++ L +++R L  L  L +  N+L+ LP  IG+L  L+ L +  N +M 
Sbjct: 114 DLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMT 173

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   +   NQL  LP+ +G+  NL +    +N +T+LP ++    K+ +L
Sbjct: 174 LPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQEL 233

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L +L    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 234 SLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 292

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 293 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 352

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 353 NQLTTLPKEIGQLQNLQELYLIDNQL 378



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 172/369 (46%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  I +L  L+ L +S+N +  +P EIG    L   +   NQL+ LP+
Sbjct: 48  VLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPN 107

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 108 EIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLQL 166

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N++ ++P+ I    +L E Y+G+N L+ALP E+G+
Sbjct: 167 WNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQ 226

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 227 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 286

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 287 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 310

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +   +  LDL  N +  LP E+    +LQ   L+ N++   P  I   L +L 
Sbjct: 311 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEI-GQLQNLQ 369

Query: 431 CLKLDNNPL 439
            L L +N L
Sbjct: 370 ELYLIDNQL 378



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 166/377 (44%), Gaps = 64/377 (16%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+   KL  L N  I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P+
Sbjct: 49  LDLSQQKLKTLPNE-IEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPN 107

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L  LP E+ +L  L  L L  NQL     E  QL+ L  L L 
Sbjct: 108 EIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLW 167

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  LP EIG++  L+ L L  N L                    + LP NE  +   
Sbjct: 168 NNQLMTLPEEIGQLKNLQTLNLGYNQL--------------------TALP-NEIGQLQN 206

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            +E               L L    L+A+P+EI +  ++ +L LS N +  LP E+    
Sbjct: 207 LQE---------------LYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 251

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           +LQ L L  N++   P+ I   L +L  L L +N L  +     KDI  LQ         
Sbjct: 252 NLQDLYLGSNQLTILPNEI-GQLKNLQTLYLRSNRLTTLS----KDIEQLQ--------- 297

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
                       +L+ L L   QL   P +I +L+ L++LDL  N L ++P+    L +L
Sbjct: 298 ------------NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 345

Query: 524 TELDLSDNNISALPPEL 540
              +L++N ++ LP E+
Sbjct: 346 QVFELNNNQLTTLPKEI 362



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 164/352 (46%), Gaps = 53/352 (15%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P+T   L+  I+       LDL Q ++ ++P+ I    +L   Y+  N L  LP E+G+L
Sbjct: 30  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQL 89

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  NQL+    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 90  QNLRVLELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 149

Query: 312 TLRSSLVNGPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
           TL + +        LK L R +L  N+          L+T+   +      + L+L    
Sbjct: 150 TLPTEI------GQLKNLQRLQLWNNQ----------LMTLPEEIGQLKNLQTLNLGYNQ 193

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A+P+EI +   + +L L  N +  LP E+     LQ L LS N++   P+ I   L +
Sbjct: 194 LTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEI-GQLQN 252

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L +LQ LYLR  +L 
Sbjct: 253 LQDLYLGSNQLTILPNE-------------------------IGQLKNLQTLYLRSNRLT 287

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
               DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+
Sbjct: 288 TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 339



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 232 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 278

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 279 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 338

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP+++     + +L +  N+L+
Sbjct: 339 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLS 379


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 239/476 (50%), Gaps = 57/476 (11%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++ HN+L+E+P  IG+L  L  LD+S N + K+P+ IG+ T L       N+L +L
Sbjct: 72  LTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDL 131

Query: 130 PSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P S+GR  NL++    SNN +  LP+ + + S ++ + + GN+LT L  + I+    LT 
Sbjct: 132 PESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPES-ISKLINLTN 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N LN +PE+IG+L++L  L L  N++  +P SI     L+E  +  N L+ +P  
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +G L  L +L L S        ++ +        SN++L  LP  IG +  L+   +   
Sbjct: 251 IGNLINLTSLSLGSGSRGVLKTKSPE--------SNDTLKKLPESIGNLKMLKSFSIGST 302

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L                    ++LPE+            I   T L    +EL LE   
Sbjct: 303 QL--------------------TKLPES------------IGNLTNL----RELFLENNQ 326

Query: 369 LSAIPSEIWEAGEITKLD---LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
           L  +P  I   G +TKLD   LS N + +LP  + +   L+ +IL  N++ D P++I  +
Sbjct: 327 LIELPESI---GNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESI-GN 382

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
           +++L  L+L +N L ++P +   ++  L+ L L++N +  +PE     +L  L  L +  
Sbjct: 383 MTNLVELRLSDNQLIKLP-ESLGNLTKLEYLQLNHNRLVEIPE--AIGNLTKLTRLSIGD 439

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            Q+ E P  I  L +L  L L +N +  +PE F  L  L +L L+ N I  LP EL
Sbjct: 440 NQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSNPIKYLPAEL 495



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 209/425 (49%), Gaps = 28/425 (6%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L   D   NQL E+P  +G+ +NL+    SNN +T LPE + + ++++ L ++ NKL+ 
Sbjct: 71  SLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSD 130

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  ++     +   L  S N L  +P++IG+LS L  + L  N++  +P SIS   +L  
Sbjct: 131 LPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTN 190

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             + +N L+ LP  +G L+KL +L L  NQL +       LR LS L L+ N+L+ +P  
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +  L  L            SL +G        L+++ PE+ D     T + L     
Sbjct: 251 IGNLINLTSL------------SLGSGSRGV----LKTKSPESND-----TLKKLPESIG 289

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
            L +  K  S+    L+ +P  I     + +L L  N + ELP  + +   L  L LS N
Sbjct: 290 NLKML-KSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYN 348

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   PD I  +L+ L  + L+NN L  +P +   ++  L  L LS N +  LPE+    
Sbjct: 349 QLIKLPDCI-GNLTKLKRIILENNQLIDLP-ESIGNMTNLVELRLSDNQLIKLPES--LG 404

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L  L+ L L   +L E P  I  L +L  L +  N +  +PE   NL+ LT L L  N 
Sbjct: 405 NLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQ 464

Query: 533 ISALP 537
           I+ LP
Sbjct: 465 ITKLP 469



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 210/442 (47%), Gaps = 58/442 (13%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF---- 100
           + L  L L HN + ++ + +  L  LT L++S+N+L++LP +IG L  L  L + F    
Sbjct: 70  LSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLS 129

Query: 101 --------------------NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
                               N + K+PD IG+ + L     S NQL ELP S+ + +NL+
Sbjct: 130 DLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLT 189

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           +   S+N +  LPE + + +K+  L + GN+LT L  + I +   L+EL  + N L  +P
Sbjct: 190 NLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKS-IGNLRKLSELSLAGNNLTEVP 248

Query: 201 ETIGSLSRLIRLDL--------------HQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           E IG+L  L  L L                + +  +P SI     L  F +G+  L+ LP
Sbjct: 249 ECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLP 308

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +G L+ L  L L +NQL E       L +L  L LS N L  LP  IG +T L++++L
Sbjct: 309 ESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIIL 368

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELS 363
             N L  L  S+ N     +   +  RL +N+          LI +   L   +K   L 
Sbjct: 369 ENNQLIDLPESIGN-----MTNLVELRLSDNQ----------LIKLPESLGNLTKLEYLQ 413

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L    L  IP  I    ++T+L +  N I ELP  + + + L  L L +N+I   P++  
Sbjct: 414 LNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPES-F 472

Query: 424 TSLSSLSCLKLDNNPLRQVPSD 445
             L  L  L L++NP++ +P++
Sbjct: 473 GKLKKLKDLYLNSNPIKYLPAE 494



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 1/209 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+   +    + KL E + NL  L  L + +N+L ELP +IG L  L  L +S+N ++K+
Sbjct: 294 LKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKL 353

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG+ T L +    +NQL +LP S+G   NL + + S+N +  LPE L + +K+  L 
Sbjct: 354 PDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQ 413

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  +    I + T LT L    N +  +PE+IG+LS+L RL LH+N+I  +P S 
Sbjct: 414 LNHNRLVEIP-EAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESF 472

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKL 255
                L + Y+ +N +  LPAEL  L K+
Sbjct: 473 GKLKKLKDLYLNSNPIKYLPAELSHLIKI 501


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 177/365 (48%), Gaps = 43/365 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VL++S   L+  P  I +   LK LD+S N +  +P EIG    L K 
Sbjct: 40  LTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S N L ELP  +G+  NL     S N +T+LP+++    K+  L V  N+LT+L    
Sbjct: 100 NVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKE- 158

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L ELI   N L  +PE IG L +  +L LH N++ ++P  +    +L + Y+  
Sbjct: 159 IGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQ 218

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP E+G+L KL TL L+SN+L     E  QL+ L  L L  N+L+ LP EIG++ 
Sbjct: 219 NRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQ 278

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L+ N L  +         P  +  L++                           
Sbjct: 279 NLDNLDLSDNQLTLI---------PKEIGQLQNL-------------------------- 303

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            K L L G +L+ +P EI +   +  LDLS NS+  LP E+    +L  L      +K  
Sbjct: 304 -KLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFL-----AMKGI 357

Query: 419 PDAIL 423
           PD IL
Sbjct: 358 PDLIL 362



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 161/310 (51%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK     G L+LS++ L   P  + K               +L+ L L++N ++ L +++
Sbjct: 44  LKNPMDVGVLDLSSKLLTTFPKGIEK-------------FQNLKHLDLSNNQLKALPKEI 90

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  LNVS N L ELP  IG+L  L+ L++S N +  +P EIG    L       N
Sbjct: 91  GQLQNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYN 150

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L  LP  +G+  NL +     N +TSLPE++    K  KL +  N+LT L   L     
Sbjct: 151 RLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGL-CKLQ 209

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L ++   +N L  +P+ IG L +L  L L+ N + ++P  I    +L +  +  N L+ 
Sbjct: 210 NLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTT 269

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  LDL  NQL     E  QL+ L +LDLS NSL+ LP EIG++  L+ L
Sbjct: 270 LPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLL 329

Query: 304 LLTGNPLRTL 313
            L+GN L TL
Sbjct: 330 DLSGNSLTTL 339



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 155/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL    + + P  I    +L    + NN L ALP E+G+L  L  L++  N L E   E
Sbjct: 53  LDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L+LS N L+ LP EIG++  L  L +  N L  L         P  +  L+
Sbjct: 113 IGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTIL---------PKEIGQLQ 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            +EL L G +L+++P EI +  +  KL L  N
Sbjct: 164 NL---------------------------EELILYGNSLTSLPEEIGQLQKFEKLYLHDN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP  L    +L+ + L +N++   P  I   L  L  L L +N L  +P +    +
Sbjct: 197 QLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEI-GQLRKLWTLYLYSNELTTLPEE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ L L  N + +LP+      L +L  L L   QL   P +I +LQ L++LDLS NS
Sbjct: 255 QNLRQLSLKLNNLTTLPKE--IGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNS 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P+    L +L  LDLS N+++ LP E+
Sbjct: 313 LTTLPKEIGQLQNLKLLDLSGNSLTTLPKEI 343



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 159/377 (42%), Gaps = 61/377 (16%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS 151
            +S+ + F     IP  +      ++   +  Q+ + L  +L   +++     S+  +T+
Sbjct: 3   FQSVSIRFKKRFTIPLIMICFFCELQAQTNEGQIYRNLTEALKNPMDVGVLDLSSKLLTT 62

Query: 152 LPEDLADCSKMSKLDVEGN----------------KLTVLSNNL------IASWTMLTEL 189
            P+ +     +  LD+  N                KL V  NNL      I     L +L
Sbjct: 63  FPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLEQL 122

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P+ IG L +L  L ++ NR+  +P  I    +L E  +  N+L++LP E+
Sbjct: 123 NLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEI 182

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L K   L LH NQL       C+L+ L  + L  N L+ LP EIG++  L  L L  N
Sbjct: 183 GQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSN 242

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL   +        L+ LR                              +LSL+  N
Sbjct: 243 ELTTLPEEI------GQLQNLR------------------------------QLSLKLNN 266

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +   +  LDLS N +  +P E+    +L+ L LS N +   P  I   L +
Sbjct: 267 LTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEI-GQLQN 325

Query: 429 LSCLKLDNNPLRQVPSD 445
           L  L L  N L  +P +
Sbjct: 326 LKLLDLSGNSLTTLPKE 342



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 34  EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHML 93
           E G+  K W       L L  N +  L E++  L  L  L++  N L+ LP  IG+L  L
Sbjct: 227 EIGQLRKLW------TLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNL 280

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
            +LD+S N +  IP EIG    L   D S N L  LP  +G+  NL     S N +T+LP
Sbjct: 281 DNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLP 340

Query: 154 EDLADCSKMSKLDVEG 169
           +++     +  L ++G
Sbjct: 341 KEIGQLKNLYFLAMKG 356


>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
          Length = 1894

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 249/515 (48%), Gaps = 30/515 (5%)

Query: 52  LAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDE 109
           L++  I ++ E    N   LT + +S NKL+ +PA +   L  L+ L +S N +  IP+ 
Sbjct: 73  LSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPET 132

Query: 110 IGSATALVK-FDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLAD-CSKMSKLD 166
           + +  A ++    S N+L  +P ++   L +L      NN +TS+P  + +  + +  L 
Sbjct: 133 VFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLY 192

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSS 225
           +  NKLT +   +      L  L    N L  +PET+   L+ L  L L+ N + SIP++
Sbjct: 193 LSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPAT 252

Query: 226 I-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLD 281
           + +G  SL   Y+  N L+++P      L+ L +L L  N+L      V      L  L 
Sbjct: 253 VFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLY 312

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPEN 336
           LS+N L+ +P  +   +T+L+ L L+GN L ++  ++  G       YL S     +PE 
Sbjct: 313 LSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTSVPET 372

Query: 337 EDSEASTTKEDLITMATRLSVTS---------KELSLEGMNLSAIPSEIWEA-GEITKLD 386
             +  ++ +   ++     SV +         + L L    L++IP+ ++     +  L 
Sbjct: 373 VFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQSLY 432

Query: 387 LSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           LS N +  +P       ASLQTL LS NK+   P  +   L+SL  L L +N L  +P+ 
Sbjct: 433 LSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSIPAT 492

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRIL 503
           GF  +  LQ L LS N + S+PE   F+ L  LQ LYL   +L   P  +   L  L+ L
Sbjct: 493 GFNGLASLQTLYLSSNELTSIPET-VFAGLASLQTLYLSGNELTSVPETVFAGLASLQTL 551

Query: 504 DLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALP 537
            LS N L S+PE  F  L SL  L LS N ++++P
Sbjct: 552 YLSGNELTSVPETVFAGLASLQTLYLSSNELTSIP 586



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 228/458 (49%), Gaps = 28/458 (6%)

Query: 95  SLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSL 152
           S+D+S+  I +I + + + T +L +   S N+L  +P+++   L +L     S+N +TS+
Sbjct: 70  SVDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSI 129

Query: 153 PED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLI 210
           PE   A  + +  L + GN+LT +   + A    L  L    N L  +P T+   L+ L 
Sbjct: 130 PETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQ 189

Query: 211 RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY 268
            L L  N++ S+P ++ +G  SL   Y+ NN L+++P      L+ L TL L+ N+L   
Sbjct: 190 TLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSI 249

Query: 269 --CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              V A    L  L LS N L+ +P  +   + +LR L L+ N L ++  ++ +G   A 
Sbjct: 250 PATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGL--AS 307

Query: 326 LKYLRSRLPENE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEIT 383
           L+YL   L  N+  S  +T    L ++ T        L L G  L+++P  ++     + 
Sbjct: 308 LQYLY--LSSNKLTSVPATVFAGLTSLQT--------LYLSGNELTSVPETVFTGLASLQ 357

Query: 384 KLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            L LS N +  +P    +  ASLQTL LS NK+   P  +   L+SL  L L +N L  +
Sbjct: 358 TLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSI 417

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQL 500
           P+  F  +  LQ L LS N + S+PE   F  L  LQ LYL   +L   P  +   L  L
Sbjct: 418 PATVFAGLTSLQSLYLSSNKLTSVPET-VFDGLASLQTLYLSSNKLTSVPATVFNGLASL 476

Query: 501 RILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALP 537
           + L L  N L SIP  GF  L SL  L LS N ++++P
Sbjct: 477 QTLYLYDNELTSIPATGFNGLASLQTLYLSSNELTSIP 514



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 252/540 (46%), Gaps = 62/540 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN-LPLLT 71
           +L LS   L  VP  V+                 L+ L L++N +  + E + + L  L 
Sbjct: 262 TLYLSYNKLTSVPETVFDGL------------ASLRSLYLSYNELTSVPETVFDGLASLQ 309

Query: 72  VLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATA-LVKFDCSSNQLKEL 129
            L +S NKL+ +PA +   L  L++L +S N +  +P+ + +  A L     SSN+L  +
Sbjct: 310 YLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTSV 369

Query: 130 PSSLGRCL-NLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           P ++   L +L     S+N +TS+P    A  + +  L +  N+LT +   + A  T L 
Sbjct: 370 PETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQ 429

Query: 188 ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
            L  S N L  +PET+   L+ L  L L  N++ S+P+++ +G  SL   Y+ +N L+++
Sbjct: 430 SLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSI 489

Query: 246 PAE-LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLR 301
           PA     L+ L TL L SN+L      V A    L  L LS N L+ +P  +   + +L+
Sbjct: 490 PATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQ 549

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L+GN L ++  ++  G       YL S       +E ++  E +      L    + 
Sbjct: 550 TLYLSGNELTSVPETVFAGLASLQTLYLSS-------NELTSIPETVFAGLASL----QY 598

Query: 362 LSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWP 419
           L L    L+++P  ++     +  L LS N +  +P    +  ASLQTL LS NK+   P
Sbjct: 599 LYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVP 658

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             +   L+SL  L L +N L  VP+  F  +  L+ L L +N + S+PE   F+ L  LQ
Sbjct: 659 ATVFAGLASLRSLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETV-FAGLTSLQ 717

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALP 537
            LYL                         N L S+PE  F  L SL  L L +N ++++P
Sbjct: 718 TLYLY-----------------------DNELTSVPETVFNGLASLQYLYLDNNKLTSIP 754



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 237/516 (45%), Gaps = 39/516 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED-LRNLPLLT 71
           +L LS+  L  VP  V+                 LQ L L  N +  +       L  L 
Sbjct: 382 TLYLSSNKLTSVPATVFAGL------------ASLQYLYLYDNELTSIPATVFAGLTSLQ 429

Query: 72  VLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATA-LVKFDCSSNQLKEL 129
            L +S NKL+ +P  + + L  L++L +S N +  +P  + +  A L       N+L  +
Sbjct: 430 SLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSI 489

Query: 130 PSS-LGRCLNLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           P++      +L     S+N +TS+PE   A  + +  L + GN+LT +   + A    L 
Sbjct: 490 PATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQ 549

Query: 188 ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
            L  S N L  +PET+   L+ L  L L  N + SIP ++ +G  SL   Y+ +N L+++
Sbjct: 550 TLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKLTSV 609

Query: 246 P-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLR 301
           P      L+ L TL L  N+L      V      L  L LS N L+ +P  +   + +LR
Sbjct: 610 PETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLR 669

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L ++ +++  G     L  LRS     + +E ++  E +    T L    + 
Sbjct: 670 SLGLYDNKLTSVPATVFAG-----LASLRSL--SLDFNELTSIPETVFAGLTSL----QT 718

Query: 362 LSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWP 419
           L L    L+++P  ++     +  L L  N +  +P    +  AS+QTL LS N++   P
Sbjct: 719 LYLYDNELTSVPETVFNGLASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVP 778

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + +   L+SL  L + +N L  VP   F  +  LQ LDLSYN + S+PE   F+ L  L+
Sbjct: 779 ETVFNGLASLQYLNVSSNELTSVPETVFDGLASLQTLDLSYNKLTSVPET-VFAGLASLR 837

Query: 479 ELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSI 513
            LYL   +L   P  +   L  L  LDL  N L S+
Sbjct: 838 SLYLDNNELTSVPETVFAGLDSLWRLDLHSNRLASL 873



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 254/584 (43%), Gaps = 104/584 (17%)

Query: 14   LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN-LPLLTV 72
            L L N  L  +P  V+                 +Q L L+ N +  + E + N L  L  
Sbjct: 743  LYLDNNKLTSIPETVFAGL------------ASVQTLYLSGNELTSVPETVFNGLASLQY 790

Query: 73   LNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATA-LVKFDCSSNQLKELP 130
            LNVS N+L+ +P  + + L  L++LD+S+N +  +P+ + +  A L      +N+L  +P
Sbjct: 791  LNVSSNELTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVP 850

Query: 131  SSLGRCLN-LSDFKASNNCITSLPEDL-ADCS------------------------KMSK 164
             ++   L+ L      +N + SL   L  DC                          +  
Sbjct: 851  ETVFAGLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEA 910

Query: 165  LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRILSI- 222
            L +  N+L  +S+++ A  + LT L    N L+ + P     L+RL  L +H NR+  + 
Sbjct: 911  LYLHSNQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLS 970

Query: 223  PSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQ----LR- 276
            P +  G  +LA   + +N L++L A  L  L  +  LDL SN+L +   +A      LR 
Sbjct: 971  PGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRN 1030

Query: 277  ---------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                                 L  L LS+N L+ +P  +G + +LR LLL  NPL +L  
Sbjct: 1031 LSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPAGLGSLASLRYLLLDHNPLTSLDV 1090

Query: 316  SLV-NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
            SL+ N P       LR+ L  N D+  + + +    + T L                   
Sbjct: 1091 SLLDNKPD------LRA-LGVNSDAFKALSAQRPSVLETLL------------------- 1124

Query: 375  EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            E+W     +  D  +++  EL  +LS    L      ++ I      +L+SLSS+  L L
Sbjct: 1125 ELWLCK--SDDDQDQSAAGELLDKLSQLTGLYLFGFDQSLIHA---GMLSSLSSVRVLWL 1179

Query: 435  DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            ++N L Q+P   F  +P LQ L L +N  +       S+L  L EL++    +   P   
Sbjct: 1180 EDNLLDQLPPGTFDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHIVNDGITRVPAGA 1239

Query: 495  LR-LQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISAL 536
             R L  LR LDLS N + SI  E F NL ++ +LDLS+N +  L
Sbjct: 1240 FRSLSGLRTLDLSGNLISSIEAEAFDNLDNVRQLDLSNNRLVML 1283



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 256/645 (39%), Gaps = 150/645 (23%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED-LRNLPLLT 71
            +L LS   L  VP  V+                 LQ L L++N +  +       L  L 
Sbjct: 622  TLYLSYNELTSVPETVFNGL------------ASLQTLYLSYNKLTSVPATVFAGLASLR 669

Query: 72   VLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKEL 129
             L +  NKL+ +PA +   L  L+SL + FN +  IP+ + +  T+L       N+L  +
Sbjct: 670  SLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSV 729

Query: 130  PSSLGRCL-NLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            P ++   L +L      NN +TS+PE   A  + +  L + GN+LT +   +      L 
Sbjct: 730  PETVFNGLASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQ 789

Query: 188  ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
             L  S N L  +PET+   L+ L  LDL  N++ S+P ++ +G  SL   Y+ NN L+++
Sbjct: 790  YLNVSSNELTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSV 849

Query: 246  P-AELGKLSKLGTLDLHSNQLKEYCVEA---CQ-----------------------LRLS 278
            P      L  L  LDLHSN+L    +     C                        + L 
Sbjct: 850  PETVFAGLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLE 909

Query: 279  VLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L +N L+ +  ++  ++++L  L L  N L    SSL  G    L +     +  N 
Sbjct: 910  ALYLHSNQLADISSDVFAQLSSLTTLTLHNNRL----SSLSPGAFAGLARLTTLSIHHNR 965

Query: 338  DSEAS-TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT------KLDLSRN 390
             +  S    + L T+AT        L L   +L+++      AG +T       LDLS N
Sbjct: 966  LTRLSPGAFQGLSTLAT--------LDLHDNHLTSL-----TAGALTGLDAMRALDLSSN 1012

Query: 391  SIQELPPE-------------------------LSSCASLQTLILSRNKIKDWPDAILTS 425
             + +LP +                         L   A L+ L LS N++ + P A L S
Sbjct: 1013 KLADLPAQALHNLTGLRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVP-AGLGS 1071

Query: 426  LSSLSCLKLDNNPLRQ----------------VPSDGFK--------------------- 448
            L+SL  L LD+NPL                  V SD FK                     
Sbjct: 1072 LASLRYLLLDHNPLTSLDVSLLDNKPDLRALGVNSDAFKALSAQRPSVLETLLELWLCKS 1131

Query: 449  --------------DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
                           +  L  L L     SL      SSL  ++ L+L    L + P   
Sbjct: 1132 DDDQDQSAAGELLDKLSQLTGLYLFGFDQSLIHAGMLSSLSSVRVLWLEDNLLDQLPPGT 1191

Query: 495  L-RLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALP 537
              +L  L+ L L  N L ++P     NL+ LTEL + ++ I+ +P
Sbjct: 1192 FDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHIVNDGITRVP 1236



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 360 KELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKD 417
           + L L G  L+++P  ++     +  L L  N +  +P    +  ASLQTL LS NK+  
Sbjct: 141 RVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTS 200

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            P+ +   L+SL  L LDNN L  VP   F  +  LQ L L  N + S+P    F+ L  
Sbjct: 201 VPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPAT-VFAGLAS 259

Query: 477 LQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNIS 534
           LQ LYL   +L   P  +   L  LR L LS N L S+PE  F  L SL  L LS N ++
Sbjct: 260 LQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLT 319

Query: 535 ALPPELVS 542
           ++P  + +
Sbjct: 320 SVPATVFA 327


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 191/394 (48%), Gaps = 16/394 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+  N ++
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLI 86

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 87  ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 146

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L L  N+I ++P 
Sbjct: 147 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQ 205

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 206 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 265

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++L         T
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQL---------T 316

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I     L    +EL L    L+ IP EI +   + +L LS N +  +P E+    
Sbjct: 317 ILPKEIGKLQNL----QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +LQ L LS N++   P  I   L +L  L L NN
Sbjct: 373 NLQELYLSNNQLITIPKEI-GQLQNLQTLYLRNN 405



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 197/424 (46%), Gaps = 66/424 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL     S+N +  LP+++     +  LD+  N+L +L   
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIIL--- 88

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ I  L  L  LDL  N++  +P  I    +L E Y+ 
Sbjct: 89  ---------------------PKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLS 127

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L L NN L+ LP EIGK+
Sbjct: 128 NNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKL 187

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L+ N ++TL         P  ++ L+                           
Sbjct: 188 QKLQWLYLSYNQIKTL---------PQEIEKLQKL------------------------- 213

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             + L L    L+ +P EI +  ++  L L  N +  LP E+    +L+ L L+ N++  
Sbjct: 214 --QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 271

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            P  I   L +L  L L +N L  +P +    +  LQ+LDL  N +  LP+      L +
Sbjct: 272 IPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGNNQLTILPKE--IGKLQN 327

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQELYL   QL   P +I +LQ L+ L LS N L +IP+    L +L EL LS+N +  +
Sbjct: 328 LQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITI 387

Query: 537 PPEL 540
           P E+
Sbjct: 388 PKEI 391



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 169 SLYLPNNQLTTLPQEI-------GKLQK------LQWLYLSYNQIKTLPQEIEKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 216 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 276 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 334

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 335 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 394

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 395 QNLQTLYLRNNQF 407



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 262 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 308

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 309 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 369 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 409



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  LDLS   ++ LP ++    +LQ L LS N++   P  I   L +L  L L +N L 
Sbjct: 28  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEI-RQLKNLQMLDLRSNQLI 86

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQELYL   QL   P +I +LQ+
Sbjct: 87  ILPKE-IRQLKNLQMLDLRSNQLTILPKE--IGKLQNLQELYLSNNQLTTFPKEIGKLQK 143

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ L+LS N +++IP+  + L  L  L L +N ++ LP E+
Sbjct: 144 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 184


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
            [Saccoglossus kowalevskii]
          Length = 1212

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 248/563 (44%), Gaps = 82/563 (14%)

Query: 43   EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
            E   ++K+IL  N + +L E +  L  L +L++SHNKL E+P+++ +L  L  LD+  N 
Sbjct: 592  EYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQ 651

Query: 103  IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK- 161
            I  IP  IGS   L   D S N L  LP  +    NL       N I   P D+  CSK 
Sbjct: 652  ISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDI--CSKG 709

Query: 162  -------------MSKLDVEGNKLTVLSNN-------LIASWTMLTELIASKNLLNGMPE 201
                         M K   + NK   L+N        +I+ +  + +L    N L+ +P+
Sbjct: 710  VDAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPD 769

Query: 202  TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
             + +L++L  LD+  N++ +IP S+    +L    +    +S + + +  L+KL  LD+ 
Sbjct: 770  EMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVK 829

Query: 262  SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
             N + +   E   L +L VLDL +N +  LP E+  +  L KL +  NP+      +   
Sbjct: 830  GNVITKLPPELGALDKLEVLDLQDNDIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCK 889

Query: 321  PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               A   Y                  D+I M  +   + +E+ L    L  IPS I +  
Sbjct: 890  GFKAFNHYW-----------------DIIGMMEKNGESCEEMDLSSKQLVYIPSMISQYT 932

Query: 381  EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
             + KL+L  N +  LP E+     L+ L LSRNK  + P  IL +LS LS L + +N L 
Sbjct: 933  HLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPELPSIIL-NLSKLSMLDVSDNQLS 991

Query: 441  QVPSD--GFKDIPM-----------------LQILDLSYN-IASLPEN------------ 468
             V SD    K++ +                 L  LD+S N + S  EN            
Sbjct: 992  VVSSDIGNIKEVDLSHNSISIITNETNHSYKLTKLDVSKNRLTSFRENVGMFEKLQQLNI 1051

Query: 469  --------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
                         L  L  L +    +++ P +I +L+ L +L  S N L ++P    +L
Sbjct: 1052 SINEIKSIDGIHQLCMLTYLNIENNPIKQIPQEISKLKTLTVLKASNNYLTALPSSIAHL 1111

Query: 521  TSLTELDLSDNNISALPPELVSV 543
              L ++DLS N ++ +P E+ S+
Sbjct: 1112 VELLDVDLSHNEVTRIPKEIESL 1134



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 236/526 (44%), Gaps = 74/526 (14%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  ++WE V++         +EK K+          +++    L+ +PA IG+   +K +
Sbjct: 192 EFRRYWELVEI---------LEKYKD-----TTCIEIDLRDKGLTYIPATIGQYGHIKKI 237

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
            +S N++  +PDE+     L + D S N+L   P SL +   LS    S N +TSLP ++
Sbjct: 238 RLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLSVLDLSENAMTSLPNEI 297

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
              S + KL++ GN + VL   +    T LT L   +  +  +P  +G++S L  LDL  
Sbjct: 298 CSLSHLQKLNISGNNIGVLPLAM-GEMTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTG 356

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL 275
           N I SIP  +     L E  +  N+++  P +  G ++           L+EY  E+   
Sbjct: 357 NHITSIPRELKKLSKLKELIIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDES--- 413

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           R+  ++ +   L  LP  IG    ++KL L+GN L TL         P  +KY+   L  
Sbjct: 414 RVE-MNFTGRRLFYLPNCIGDYKHIKKLRLSGNELTTL---------PDEMKYMSEEL-- 461

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                                    EL L    L  IP  + +   +T L+L+ N I  +
Sbjct: 462 ------------------------DELDLSCNKLDEIPRCVLQLTNLTYLNLNGNVIHNI 497

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-SDGFKDIPML- 453
            P++     LQTL L+ NK+       L  L  L  L++  NP+ + P +   K +P   
Sbjct: 498 SPDIKRLRKLQTLDLNGNKVMRLIRE-LAELPILETLQVGGNPIEEPPLTICEKGVPEFK 556

Query: 454 ---QILDL--SYNIASLPE----NPPFSSLP-------HLQELYLRRMQLREAPTDILRL 497
              QI+ +   Y   SL E       F  LP       H++++ L   +L E P  I  L
Sbjct: 557 QYWQIIGMLEKYKDTSLDEMNLSGNGFICLPASVGEYRHIKKIILGGNKLSELPETISEL 616

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            QL ILDLS N L+ IP    +L++L+ LD+  N IS +PP + S+
Sbjct: 617 TQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIGSL 662



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 237/501 (47%), Gaps = 56/501 (11%)

Query: 40   KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
            ++W+ ++L +     +N E              +++++  L  LP  I E   +K L++ 
Sbjct: 715  RYWQIIELMEKSKNKDNKE--------------MDLNNQNLEYLPCIISEYGHIKKLNLQ 760

Query: 100  FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
             N +  +PDE+ + T L   D S N+L+ +P SL +  NL     S   I+ +  ++ + 
Sbjct: 761  NNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNL 820

Query: 160  SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            +K+  LDV+GN +T L   L  +   L  L    N ++ +P  + SL +L +L + +N I
Sbjct: 821  TKLELLDVKGNVITKLPPEL-GALDKLEVLDLQDNDIHNLPRELTSLKKLTKLCVERNPI 879

Query: 220  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG----TLDLHSNQLKEYCVEACQL 275
               P  I  CC       G  A +     +G + K G     +DL S QL        Q 
Sbjct: 880  EEPPYDI--CCK------GFKAFNHYWDIIGMMEKNGESCEEMDLSSKQLVYIPSMISQY 931

Query: 276  -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              L  L+L NN LS LP E+GK+T L +L L+ N    L S ++N    ++L        
Sbjct: 932  THLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPELPSIILNLSKLSMLDV------ 985

Query: 335  ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
               D++ S    D+  +        KE+ L   ++S I +E   + ++TKLD+S+N +  
Sbjct: 986  --SDNQLSVVSSDIGNI--------KEVDLSHNSISIITNETNHSYKLTKLDVSKNRLTS 1035

Query: 395  LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
                +     LQ L +S N+IK   D I   L  L+ L ++NNP++Q+P +  K +  L 
Sbjct: 1036 FRENVGMFEKLQQLNISINEIKSI-DGI-HQLCMLTYLNIENNPIKQIPQEISK-LKTLT 1092

Query: 455  ILDLSYN-IASLPENPPFSSLPHLQELY---LRRMQLREAPTDILRLQQLRILDLSQNSL 510
            +L  S N + +LP     SS+ HL EL    L   ++   P +I  L++L  L+L  N L
Sbjct: 1093 VLKASNNYLTALP-----SSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCSNKL 1147

Query: 511  QSIPEGFKNLTSLTELDLSDN 531
            +S+P     L +L ++ L  N
Sbjct: 1148 ESLPRELGQLPALKDIRLDGN 1168



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 248/567 (43%), Gaps = 73/567 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++K+ L+ NN+  L ++++++  L  +++S NKL   P ++ +L  L  LD+S N++  +
Sbjct: 234 IKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLSVLDLSENAMTSL 293

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EI S + L K + S N +  LP ++G    L+  +     I  LP +L + S +  LD
Sbjct: 294 PNEICSLSHLQKLNISGNNIGVLPLAMGEMTELTSLEMRRIGIEFLPPELGNVSNLEVLD 353

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL----------------- 209
           + GN +T +   L     +   +I   ++     +  GS++                   
Sbjct: 354 LTGNHITSIPRELKKLSKLKELIIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDES 413

Query: 210 -IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKE 267
            + ++    R+  +P+ I     + +  +  N L+ LP E+  +S +L  LDL  N+L E
Sbjct: 414 RVEMNFTGRRLFYLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDE 473

Query: 268 YCVEACQLR---LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
             +  C L+   L+ L+L+ N +  + P+I ++  L+ L L GN +  L   L   P   
Sbjct: 474 --IPRCVLQLTNLTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELPILE 531

Query: 325 LLKYLRSRLPE------NEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIW 377
            L+   + + E       +          +I M  +   TS  E++L G     +P+ + 
Sbjct: 532 TLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNLSGNGFICLPASVG 591

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           E   I K+ L  N + ELP  +S    L+ L LS NK+K+ P + L  LS+LS L +  N
Sbjct: 592 EYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSS-LFDLSNLSHLDIRGN 650

Query: 438 PLRQVPSD----------------------GFKDIPMLQILDLSYNIASLPENPPFSSLP 475
            +  +P +                        KD+  L+ILD+  N    P     S   
Sbjct: 651 QISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKGV 710

Query: 476 HLQELYLRRMQLREA-------------------PTDILRLQQLRILDLSQNSLQSIPEG 516
              + Y + ++L E                    P  I     ++ L+L  N L  +P+ 
Sbjct: 711 DAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDE 770

Query: 517 FKNLTSLTELDLSDNNISALPPELVSV 543
            +NLT L  LD+S N +  +PP L  +
Sbjct: 771 MRNLTQLEVLDVSGNKLENIPPSLYKL 797



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 238/540 (44%), Gaps = 89/540 (16%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM-------------- 92
            LQ L L  N + +L  +L  LP+L  L V  N + E P  I E  +              
Sbjct: 507  LQTLDLNGNKVMRLIRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLE 566

Query: 93   ------LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
                  L  +++S N  + +P  +G    + K     N+L ELP ++     L     S+
Sbjct: 567  KYKDTSLDEMNLSGNGFICLPASVGEYRHIKKIILGGNKLSELPETISELTQLEILDLSH 626

Query: 147  NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
            N +  +P  L D S +S LD+ GN+++++  N I S   L  L  S+N L+ +P  I  L
Sbjct: 627  NKLKEIPSSLFDLSNLSHLDIRGNQISLIPPN-IGSLQRLETLDVSENCLSTLPREIKDL 685

Query: 207  SRLIRLDLHQNRILSIPSSI--SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            + L  LD+  N I   P  I   G  +   ++     +  +     K +K   +DL +NQ
Sbjct: 686  TNLKILDIGGNDIKCPPMDICSKGVDAFKRYW---QIIELMEKSKNKDNK--EMDL-NNQ 739

Query: 265  LKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
              EY  C+ +    +  L+L NN LS LP E+  +T L  L ++GN L  +         
Sbjct: 740  NLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENI--------P 791

Query: 323  PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            P+L K               T  + LI   TR+S+              + S I    ++
Sbjct: 792  PSLYKL--------------TNLQHLILSGTRISI--------------VDSNICNLTKL 823

Query: 383  TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
              LD+  N I +LPPEL +   L+ L L  N I + P   LTSL  L+ L ++ NP+ + 
Sbjct: 824  ELLDVKGNVITKLPPELGALDKLEVLDLQDNDIHNLPRE-LTSLKKLTKLCVERNPIEEP 882

Query: 443  PSD----GFKD-------IPMLQI-------LDLS-YNIASLPENPPFSSLPHLQELYLR 483
            P D    GFK        I M++        +DLS   +  +P     S   HL++L L 
Sbjct: 883  PYDICCKGFKAFNHYWDIIGMMEKNGESCEEMDLSSKQLVYIPS--MISQYTHLKKLNLH 940

Query: 484  RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               L   P ++ +L  L  L+LS+N    +P    NL+ L+ LD+SDN +S +  ++ ++
Sbjct: 941  NNYLSALPEEVGKLTDLEELNLSRNKFPELPSIILNLSKLSMLDVSDNQLSVVSSDIGNI 1000



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 216/524 (41%), Gaps = 86/524 (16%)

Query: 63  DLRNLPLLTVLNVSHNKLSELP-----------------------AAIGELHMLKSLDVS 99
           D+++L  L  L+VS N+L E+P                       + IG+L  LK L + 
Sbjct: 47  DIKSLTQLEELSVSGNELKEIPMCVYELVNLVLLNLNDNNIKSMSSKIGKLSQLKCLQMK 106

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +PDEI    +L   + S+N + ++P+SLG    L      +N I  LP  L D 
Sbjct: 107 GNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKELKVLDLQDNNIRVLPRQLKDI 166

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             +  L V+ N +     +  +             +L    +T       I +DL    +
Sbjct: 167 ELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEKYKDTT-----CIEIDLRDKGL 221

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP++I     + +  +  N LS LP E+  + +L  +DL  N+L  +     +L RLS
Sbjct: 222 TYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLS 281

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           VLDLS N+++ LP EI  ++ L+KL ++GN +  L                         
Sbjct: 282 VLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVLP------------------------ 317

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     + M     +TS E+   G+    +P E+     +  LDL+ N I  +P E
Sbjct: 318 ----------LAMGEMTELTSLEMRRIGIEF--LPPELGNVSNLEVLDLTGNHITSIPRE 365

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSC------------------LKLDNNPLR 440
           L   + L+ LI+  N I + P     S++                      +      L 
Sbjct: 366 LKKLSKLKELIIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLF 425

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +   D   ++ L LS N + +LP+   + S   L EL L   +L E P  +L+L  
Sbjct: 426 YLP-NCIGDYKHIKKLRLSGNELTTLPDEMKYMS-EELDELDLSCNKLDEIPRCVLQLTN 483

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L+L+ N + +I    K L  L  LDL+ N +  L  EL  +
Sbjct: 484 LTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAEL 527


>gi|45551891|ref|NP_731852.2| flyers-cup, isoform A [Drosophila melanogaster]
 gi|45446477|gb|AAF54977.3| flyers-cup, isoform A [Drosophila melanogaster]
          Length = 693

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 257/601 (42%), Gaps = 122/601 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 104 KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 162

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 163 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 222

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 223 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 282

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 283 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 318

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++ E
Sbjct: 319 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 377

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 378 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 437

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 438 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 495

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQT-LILSRNKIKDW 418
           ++    L+++P ++++      +  +D +RN +  LP  L     L T L+LS N I   
Sbjct: 496 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYV 555

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I +  + +S L L NN L  +P++                         F  L  L+
Sbjct: 556 PQFI-SQFTRISFLNLSNNLLNDLPTE-------------------------FGVLNTLR 589

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALP 537
           EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  L+ LDL +N+I  +P
Sbjct: 590 ELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVP 649

Query: 538 P 538
           P
Sbjct: 650 P 650



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 365 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 424

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 425 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 484

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 485 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 544

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 545 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 604

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 605 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 664

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 665 GNPFRQPRHQILMKGTDAIMSYLRDRIP 692



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 136 SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 194

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 195 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 235

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 236 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 288

Query: 539 ELVSV 543
           +LV++
Sbjct: 289 DLVNM 293


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 179/376 (47%), Gaps = 34/376 (9%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L  LP  I +L  L+ LD+S N I+ +P EI     L   D  SNQL  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   SNN +T+ P+++    K+  L++  N++  +    I     L  L  
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKE-IEKLQKLQSLYL 119

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L +L  L+L  N+I ++P  I     L   Y+  N L+ LP E+ K
Sbjct: 120 PNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEK 179

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L L +NQL     E  QL+ L VL L+NN L+ LP EIG +  L+ L L  N L
Sbjct: 180 LQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQL 239

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            T+   +       +L                    DL     +L++  KE         
Sbjct: 240 TTIPKEIGQLQNLQML--------------------DL--GNNQLTILPKEIGKLQNLQW 277

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ IP EI +   + +L LS N +  +P E+    +LQ L LS N++   P  
Sbjct: 278 LYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKE 337

Query: 422 ILTSLSSLSCLKLDNN 437
           I   L +L  L L NN
Sbjct: 338 I-GQLQNLQTLYLRNN 352



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 177/371 (47%), Gaps = 38/371 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N I  L +++R L  L +L++  N+L+ LP  IG+L  L+ L +S N +  
Sbjct: 21  NLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 80

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L   + S+NQ+K +P  + +   L      NN +T+LP+++    K+  L
Sbjct: 81  FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWL 140

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N++  L    I     L  L   KN L  +P+ I  L +L  L L  N++ ++P  
Sbjct: 141 NLSYNQIKTLPQE-IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQE 199

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+G L  L  L L SNQL     E  QL+ L +LDL N
Sbjct: 200 IGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGN 259

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L+ L L+ N L T+   +  G    L                   
Sbjct: 260 NQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEI--GQLQNL------------------- 298

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL L    L+ IP EI +   + +L LS N +  +P E+    +
Sbjct: 299 ---------------QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQN 343

Query: 405 LQTLILSRNKI 415
           LQTL L  N+ 
Sbjct: 344 LQTLYLRNNQF 354



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 184/394 (46%), Gaps = 47/394 (11%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S+N +  LP+++     +  LD+  N++ +L                        P+ I 
Sbjct: 5   SDNQLIILPKEIRQLKNLQMLDLSDNQIIIL------------------------PKEIR 40

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  LDL  N++  +P  I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ
Sbjct: 41  QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 100

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +K    E  +L +L  L L NN L+ LP EIGK+  L+ L L+ N ++TL   +      
Sbjct: 101 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKL 160

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGE 381
             L YL               K  L T+   +    K   L L+   L+ +P EI +   
Sbjct: 161 QWL-YLH--------------KNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQN 205

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L L+ N +  LP E+    +LQ L L  N++   P  I   L +L  L L NN L  
Sbjct: 206 LKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEI-GQLQNLQMLDLGNNQLTI 264

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P +  K +  LQ L LS N + ++P+      L +LQELYL   QL   P +I +LQ L
Sbjct: 265 LPKEIGK-LQNLQWLYLSNNQLTTIPKE--IGQLQNLQELYLSNNQLTTIPKEIGQLQNL 321

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           + L LS N L +IP+    L +L  L L +N  S
Sbjct: 322 QELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS 355



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 127/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 116 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 162

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  LP  
Sbjct: 163 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQE 222

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L  L  S
Sbjct: 223 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQWLYLS 281

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 282 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 341

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 342 QNLQTLYLRNNQF 354



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 160/331 (48%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  N+++ +P  I    +L    + +N +  LP E+ +L  L  LDL SNQL     E
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L  L LSNN L+  P EIGK+  L+ L L+ N ++T+   +       L K   
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI-----EKLQKLQS 116

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             LP N+                               L+ +P EI +  ++  L+LS N
Sbjct: 117 LYLPNNQ-------------------------------LTTLPQEIGKLQKLQWLNLSYN 145

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            I+ LP E+     LQ L L +N++   P  I   L  L  L LDNN L  +P +    +
Sbjct: 146 QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQE-IGQL 203

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L++L L+ N + +LP+      L +LQ+LYL   QL   P +I +LQ L++LDL  N 
Sbjct: 204 QNLKVLFLNNNQLTTLPQE--IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 261

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L LS+N ++ +P E+
Sbjct: 262 LTILPKEIGKLQNLQWLYLSNNQLTTIPKEI 292


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 41/383 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 159

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 160 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 219

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 280 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 307

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 308 V----LDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 363

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 364 TLPEEI-KQLKNLKKLYLHNNPL 385



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 189/398 (47%), Gaps = 44/398 (11%)

Query: 139 LSDFKASNN---CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
           L+ F A  N     T+L E L + +++  LD+  +KL +L    I     L  L +  N 
Sbjct: 25  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSENNQ 83

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL  L
Sbjct: 84  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 143

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G       
Sbjct: 144 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK------ 197

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
               N P   L K                     IT    L    +EL L+   L+ +P 
Sbjct: 198 ----NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTVLPK 229

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  L L
Sbjct: 230 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQELNL 288

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + N     P +       LQ+LDL  N + +LPE      L +LQ+L+L R QL   P +
Sbjct: 289 EYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPEE--IGQLQNLQKLHLSRNQLTTLPKE 345

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 346 IGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 383



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 54  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 160

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 219

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 339

Query: 311 RTL 313
            TL
Sbjct: 340 TTL 342



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 77  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 123

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 124 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 183

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 184 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 242

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 243 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 302

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 303 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 362

Query: 299 -----------TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                       L+KL L  NPL + +   +    P  + Y 
Sbjct: 363 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 404



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 166/373 (44%), Gaps = 75/373 (20%)

Query: 181 ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 36  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 95

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 96  NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 155

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 156 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 191

Query: 350 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 192 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 239

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 240 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 276

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
               + L +LQEL L   +    P +I + Q L++LDL QN L ++PE    L +L +L 
Sbjct: 277 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLH 333

Query: 528 LSDNNISALPPEL 540
           LS N ++ LP E+
Sbjct: 334 LSRNQLTTLPKEI 346



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 142/321 (44%), Gaps = 68/321 (21%)

Query: 229 CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 22  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 81

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L++L L  N L TL                    PE         
Sbjct: 82  NQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE-------- 113

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 114 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 165

Query: 405 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 207

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 208 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 259

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  LDLS N ++ LP E+  +
Sbjct: 260 LLVLDLSGNQLTILPKEITQL 280


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 193/408 (47%), Gaps = 41/408 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+KL L+HNN++ L  ++  L  L  L +S+NKL  L   IGEL  L +L +  N + 
Sbjct: 67  VKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELE 126

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L   D   NQ +  P+ + +  NL      NN + S P  +A+  K+  
Sbjct: 127 TLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQT 186

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++ GNKL +L                        P+ IG L  L  L+L  N++ S+P 
Sbjct: 187 LELLGNKLKLL------------------------PDEIGELKNLQYLNLSLNKLESLPP 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   ++G+N L  LP  +G+L  L  L LH N LK   VE  +L+ L +L LS
Sbjct: 223 EIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLS 282

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEAS 342
            N L  LP EI K+  LR L L+GN L TL  ++  G    L K YL            +
Sbjct: 283 GNKLETLPVEIEKLKELRILQLSGNKLETLPVAI--GELENLQKLYL------------N 328

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             K + +  A       +EL L    L  +PSEI E G++  LDL  N ++ LP  +   
Sbjct: 329 DNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGEL 388

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +L+ L LS NK++  P  I     S+  L L  N + +V  DG + +
Sbjct: 389 KNLRELNLSGNKLETLPIEIEKLSGSMQLLNLRGNNISEV-GDGERTV 435



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 190/440 (43%), Gaps = 87/440 (19%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I  I   I     L K + S N LK LPS +G   NL     SNN + +L + + +   
Sbjct: 55  GITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELEN 114

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +S L ++ N+L  L                        P  IG L  L  LDL  N+  S
Sbjct: 115 LSTLHLDDNELETL------------------------PAAIGELENLRDLDLGDNQFES 150

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
            P+ I    +L    + NN L + P  + +L KL TL+L  N+LK    E  +L+ L  L
Sbjct: 151 FPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYL 210

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +LS N L  LPPEIG++  L+ L L  N L  L         P  +  L           
Sbjct: 211 NLSLNKLESLPPEIGELKNLQHLFLGDNKLEIL---------PIAIGEL----------- 250

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                E+L           ++L L   NL  +P EI +  E+  L LS N ++ LP E+ 
Sbjct: 251 -----ENL-----------QKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIE 294

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               L+ L LS NK++  P AI   L +L  L L++N L  +P+                
Sbjct: 295 KLKELRILQLSGNKLETLPVAI-GELENLQKLYLNDNKLETLPA---------------- 337

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
                        L +L+EL LR  +L+  P++I  L  L+ LDL  N L+++P     L
Sbjct: 338 ---------AIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGEL 388

Query: 521 TSLTELDLSDNNISALPPEL 540
            +L EL+LS N +  LP E+
Sbjct: 389 KNLRELNLSGNKLETLPIEI 408



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 38/240 (15%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS   L  +P E+   KN      GD   E +        +LQKL L  NN++ L  +
Sbjct: 210 LNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVE 269

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L +S NKL  LP  I +L  L+ L +S N +  +P  IG    L K   + 
Sbjct: 270 IEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLND 329

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+ LP+++G   NL +    NN +  LP ++ +   +  LD++ NKL  L        
Sbjct: 330 NKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETL-------- 381

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAEFYMGNN 240
                           P  IG L  L  L+L  N++ ++P  I   SG   L     GNN
Sbjct: 382 ----------------PAAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNL-RGNN 424


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 144/274 (52%), Gaps = 2/274 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L + +N +  L +++  L  L  LN+ +N+L  LP  IG L  L+ L ++ N +  
Sbjct: 21  NLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLAT 80

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     ++NQL+ LP  +G+  NL +    NN + S P+++   S + +L
Sbjct: 81  LPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRL 140

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+ T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ ++P  
Sbjct: 141 HLEYNRFTTLPKE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 199

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL     E   L RL  L L N
Sbjct: 200 IGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKN 259

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N L  LP EIG++  L+ L L+GNP  T    +V
Sbjct: 260 NQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 293



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 152/326 (46%), Gaps = 42/326 (12%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +PE IG L  L  L++  N+++++P  I    +L    + NN L  LP E+G 
Sbjct: 5   AYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGT 64

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +NQL     E  +L RL  L L+NN L  LP EIGK+  L++L+L  N L
Sbjct: 65  LQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRL 124

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +                                 +++ T++       + L LE    +
Sbjct: 125 ESF-------------------------------PKEIGTLSN-----LQRLHLEYNRFT 148

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI     +  L+L  N +  LP E+     L+ L L  N++   P  I T L  L 
Sbjct: 149 TLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGT-LQKLQ 207

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L NN L  +P +    +  L+ LDLS N + +LPE     +L  L+ L L+  QLR 
Sbjct: 208 HLYLANNQLATLPQE-IGQLQNLKDLDLSDNQLVTLPEE--IGTLQRLEWLSLKNNQLRT 264

Query: 490 APTDILRLQQLRILDLSQNSLQSIPE 515
            P +I +LQ L+ LDLS N   + P+
Sbjct: 265 LPQEIGQLQNLKDLDLSGNPFTTFPQ 290



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 18/292 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 47  SLNLENNRLVTLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 93

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +++N+L  LP  IG+L  LK L +  N +   P EIG+ + L +     N+   LP  
Sbjct: 94  LGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKE 153

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L      +N +T+LP+++    ++  L++  N+L  L    I +   L  L  +
Sbjct: 154 IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE-IGTLQKLQHLYLA 212

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N+++++P  I     L    + NN L  LP E+G+L
Sbjct: 213 NNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQL 272

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             L  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 273 QNLKDLDLSGNPFTTFPQEIVGLKHLKILKLKN----IPTLLSEQETIRKLL 320


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 234/539 (43%), Gaps = 73/539 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 18  LDLSNQDLTSIPEEVF-------------DITDLEFLDVSNNKLSSIPEAIGRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L  LP AIG L  L  L V  N +  +P  I     L       NQL ++P  +
Sbjct: 65  DADGNMLKSLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGV 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               +L    ASNN +++ P  +    K+ +L ++GN+LT +   +      L  L  S 
Sbjct: 125 CMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFL-LPNLEVLDVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +P  +    +L    + NN LSA P  + KL 
Sbjct: 184 NKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQ 243

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L ++ NQL E     C L  L  L + NN LS  PP + K+  LR L + GN L  
Sbjct: 244 KLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTE 303

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + S + + P   LL   +++                                    LS  
Sbjct: 304 VPSGVCSLPNLELLHVGKNK------------------------------------LSTF 327

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSL- 429
           P  + +  ++ +L ++ N + E+P  + S  +L+ L +S N I+  P+ +  LT L +L 
Sbjct: 328 PPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLD 387

Query: 430 -SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQELY 481
             C + D  P RQV          LQ+  L    A       F  +P       HL  L 
Sbjct: 388 VHCCQFDEFP-RQV----------LQLKTLEKLYAGQSVGRKFDMVPDEVGNLQHLWYLA 436

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L    LR  P+ + RL  LR + L  N   + PE    L ++ +LD+S+NNI+ LP  L
Sbjct: 437 LENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITRLPTAL 495



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 195/434 (44%), Gaps = 43/434 (9%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +    +K D S+  L  +P  +    +L     SNN ++S+PE +    K+ +LD +GN 
Sbjct: 11  TVNGRLKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I S   LT L   +N L  +P  I  L +L  L +  N++  +P  +    S
Sbjct: 71  LKSLPQ-AIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPS 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L      NN LS  P  + KL KL  L +  NQL E       L  L VLD+SNN LS  
Sbjct: 130 LEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNKLSTF 189

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L +  N L  +   + + P                             
Sbjct: 190 PPGVKKLQKLRELRINDNQLTEVPPGVCSLPN---------------------------- 221

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               L V    L+++  NLSA P  + +  ++  L ++ N + E+P  + S  +L+ L +
Sbjct: 222 ----LEV----LNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGV 273

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             NK+  +P  +   L  L  L +  N L +VPS G   +P L++L +  N +++ P  P
Sbjct: 274 GNNKLSTFPPGV-EKLQKLRVLHIYGNQLTEVPS-GVCSLPNLELLHVGKNKLSTFP--P 329

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L  L+EL++   QL E P+ +  L  L +L++S N ++ +P     LT L  LD+ 
Sbjct: 330 GVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVH 389

Query: 530 DNNISALPPELVSV 543
                  P +++ +
Sbjct: 390 CCQFDEFPRQVLQL 403



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 28/296 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N +      +  L  L VL++  N+L+E+P+ +  L  L+ L V  N +  
Sbjct: 267 NLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLST 326

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +   + NQL E+PS +    NL     SNN I  LP D+   +++  L
Sbjct: 327 FPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNL 386

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNL---LNGMPETIGSLSRLIRLDLHQNRILSI 222
           DV   +       ++   T L +L A +++    + +P+ +G+L  L  L L  N + ++
Sbjct: 387 DVHCCQFDEFPRQVLQLKT-LEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLLRTL 445

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           PS++S   +L E ++ NN     P  L                       C+L  +  LD
Sbjct: 446 PSTMSRLHNLREVHLWNNKFDTFPEVL-----------------------CELPAMEKLD 482

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           +SNN+++ LP  + +   L+ L ++GNPL      +    T A++ +L+    ++E
Sbjct: 483 ISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEAEKDE 538



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 14  LNLSNRSLRDVPNEV-----YKNFD-EAGEGDKWWEAV----DLQKLILAHN---NIEKL 60
           LN+SN  +R +PN+V      KN D    + D++   V     L+KL    +     + +
Sbjct: 363 LNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMV 422

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++ NL  L  L + +N L  LP+ +  LH L+ + +  N     P+ +    A+ K D
Sbjct: 423 PDEVGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLD 482

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            S+N +  LP++L R   L D   S N +T  P+D+ +
Sbjct: 483 ISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCE 520


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 41/383 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 49  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 108

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 109 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 167

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 168 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 227

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 228 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 287

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 288 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 315

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 316 V----LDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 371

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 372 TLPEEI-KQLKNLKKLYLHNNPL 393



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 189/398 (47%), Gaps = 44/398 (11%)

Query: 139 LSDFKASNN---CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
           L+ F A  N     T+L E L + +++  LD+  +KL +L    I     L  L +  N 
Sbjct: 33  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSENNQ 91

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL  L
Sbjct: 92  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 151

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G       
Sbjct: 152 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK------ 205

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
               N P   L K                     IT    L    +EL L+   L+ +P 
Sbjct: 206 ----NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTVLPK 237

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  L L
Sbjct: 238 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQELNL 296

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + N     P +       LQ+LDL  N + +LPE      L +LQ+L+L R QL   P +
Sbjct: 297 EYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPEE--IGQLQNLQKLHLSRNQLTTLPKE 353

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 354 IGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 391



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 62  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 108

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 109 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 168

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 169 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 227

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 228 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 287

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 288 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 347

Query: 311 RTL 313
            TL
Sbjct: 348 TTL 350



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 85  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 131

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 132 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 191

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 192 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 250

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 251 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 310

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 311 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 370

Query: 299 -----------TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                       L+KL L  NPL + +   +    P  + Y 
Sbjct: 371 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 412



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 166/373 (44%), Gaps = 75/373 (20%)

Query: 181 ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 44  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 103

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 104 NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 163

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 164 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 199

Query: 350 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 200 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 247

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 248 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 284

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
               + L +LQEL L   +    P +I + Q L++LDL QN L ++PE    L +L +L 
Sbjct: 285 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLH 341

Query: 528 LSDNNISALPPEL 540
           LS N ++ LP E+
Sbjct: 342 LSRNQLTTLPKEI 354



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 142/321 (44%), Gaps = 68/321 (21%)

Query: 229 CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 30  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 89

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L++L L  N L TL                    PE         
Sbjct: 90  NQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE-------- 121

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 122 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 173

Query: 405 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 174 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 215

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 216 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 267

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  LDLS N ++ LP E+  +
Sbjct: 268 LLVLDLSGNQLTILPKEITQL 288


>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
           CCMP2712]
          Length = 526

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 250/506 (49%), Gaps = 36/506 (7%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L VL +  N +SE+P  IG L  L  + +  N+I +IP  I +   L      
Sbjct: 9   DIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKLSVLWIQ 68

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L++LP  +G C  LS    S N +T LP  L  C+ + +L ++ N+L V   + I +
Sbjct: 69  NNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV-PPDWIRN 127

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLD--LHQNRILSIPSSISGCCSLAEFYMGNN 240
              LT +  S N +N +P  IG+ + L  L+   + N+I  +P  +     + E  + NN
Sbjct: 128 LQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTELDVSNN 187

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMT 298
            L ALP++LGKL+ L  L L  N L     ++  +   L  LDLS N L  LPPEI  +T
Sbjct: 188 RLQALPSDLGKLTNLNIL-LDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEIIFLT 246

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL--- 355
            L  L L  N ++TL   + N     LLK +   L ENE      T   +  + + +   
Sbjct: 247 NLEGLYLVNNRIKTLPGDIGN-----LLKMVEVNLSENELEYIPETVGKMEALQSLVIEE 301

Query: 356 -----------SVTS-KELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPELS 400
                       +TS  ++SL    L  +P+E +  G   ++T+L  S N +  +P  +S
Sbjct: 302 NALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIIS 361

Query: 401 SCASLQTLILSRNKIKDWPD--AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
              +L  L L++N+I+  P    +L+SL  L  L L  N L+ +PS G  +   L+ L L
Sbjct: 362 QLTTLDILHLAKNQIRKLPYELGVLSSLRELD-LSLAGNMLQMIPS-GIGNFQGLKKLFL 419

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           + N +A LP  P    L  L+EL L   +L   P  + +L+ L+ +++S N L+ +    
Sbjct: 420 NDNQLAILP--PSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVLPAI 477

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
            NL++L +L+LS N +  LP E+  +
Sbjct: 478 GNLSNLEKLNLSHNLLQGLPREIGQI 503



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 204/417 (48%), Gaps = 63/417 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS--IM 104
           L++L++ HN ++   + +RNL  LT ++VSHN +++LPA IG    L  L+VSFNS  I 
Sbjct: 108 LRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKIS 167

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P E+G    + + D S+N+L+ LPS LG+  NL+     NN I  L + ++  S + K
Sbjct: 168 KLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRK 227

Query: 165 LDVEGNKL------TVLSNNL----------------IASWTMLTELIASKNLLNGMPET 202
           LD+  N L       +   NL                I +   + E+  S+N L  +PET
Sbjct: 228 LDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYIPET 287

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE---LGKLSKLGTLD 259
           +G +  L  L + +N +  +P+ I+G  SL +  + NNAL  LPAE   +G L KL  L 
Sbjct: 288 VGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELR 347

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT--GNPLRTLRSS 316
             +NQL        QL  L +L L+ N +  LP E+G +++LR+L L+  GN L+ + S 
Sbjct: 348 FSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDLSLAGNMLQMIPSG 407

Query: 317 LVNGPTPALLKYLRSRL----PENEDSEASTT----KEDLITMATRL---------SVTS 359
           + N      L    ++L    P   D            +LI +  RL         ++++
Sbjct: 408 IGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSN 467

Query: 360 KEL-----------SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            +L           +LE +NLS      +P EI +  ++  L L  N +Q LP +L 
Sbjct: 468 NKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNELQSLPVQLG 524



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 162/305 (53%), Gaps = 18/305 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   LR++P E+                 +L+ L L +N I+ L  D+ NL  +  +
Sbjct: 228 LDLSFNMLRELPPEIIF-------------LTNLEGLYLVNNRIKTLPGDIGNLLKMVEV 274

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-- 131
           N+S N+L  +P  +G++  L+SL +  N++  +P++I   T+L K   ++N L  LP+  
Sbjct: 275 NLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAES 334

Query: 132 -SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-IASWTMLTEL 189
            ++G    L++ + SNN ++S+PE ++  + +  L +  N++  L   L + S     +L
Sbjct: 335 FAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDL 394

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N+L  +P  IG+   L +L L+ N++  +P S+     L E  + NN L ALP  L
Sbjct: 395 SLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERL 454

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  +++ +N+L+        L  L  L+LS+N L GLP EIG++  L  L L  N
Sbjct: 455 GQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHN 514

Query: 309 PLRTL 313
            L++L
Sbjct: 515 ELQSL 519



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 15/349 (4%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  I  L+ L  L LH N I  IP+ I     L +  + NN +  +P+ +  L KL
Sbjct: 3   LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62

Query: 256 GTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L + +N+L++   E     +LSVL LS N L+ LP  +G+ T LR+L++  N L+   
Sbjct: 63  SVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV-- 120

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L++    +    +       I   T L   +  +S     +S +P 
Sbjct: 121 -------PPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLN--VSFNSNKISKLPQ 171

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E+    ++T+LD+S N +Q LP +L    +L  L+   N I    D+I + LSSL  L L
Sbjct: 172 ELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSI-SMLSSLRKLDL 230

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
             N LR++P +      +  +  ++  I +LP +    +L  + E+ L   +L   P  +
Sbjct: 231 SFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGD--IGNLLKMVEVNLSENELEYIPETV 288

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +++ L+ L + +N+L  +P     LTSLT++ L++N +  LP E  ++
Sbjct: 289 GKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAI 337



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 19/267 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS   L  +P  V K            EA  LQ L++  N +  L   +  L  LT +
Sbjct: 274 VNLSENELEYIPETVGK-----------MEA--LQSLVIEENALNYLPNQINGLTSLTKI 320

Query: 74  NVSHNKLSELPA---AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           ++++N L  LPA   AIG L+ L  L  S N +  IP+ I   T L     + NQ+++LP
Sbjct: 321 SLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLP 380

Query: 131 SSLGRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
             LG   +L   D   + N +  +P  + +   + KL +  N+L +L  + +     L E
Sbjct: 381 YELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPS-VGDLLELEE 439

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +PE +G L  L ++++  N++  +  +I    +L +  + +N L  LP E
Sbjct: 440 LQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPRE 499

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +G++ KL  L L  N+L+   V+   L
Sbjct: 500 IGQIEKLLFLSLEHNELQSLPVQLGHL 526



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 7/177 (3%)

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           M L+ IP++I+E  E+  L L  N+I E+P E+ +   L  + L  N IK+ P +I ++L
Sbjct: 1   MGLTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSI-SNL 59

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
             LS L + NN L  +P +   +   L +L LS N +  LP +        L+EL +   
Sbjct: 60  QKLSVLWIQNNELEDLPEE-IGNCTQLSVLSLSENRLTKLPYS--LGQCTMLRELMIDHN 116

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS--DNNISALPPEL 540
           +L+  P  I  LQ L  +D+S NS+  +P      T L  L++S   N IS LP EL
Sbjct: 117 ELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQEL 173


>gi|28261021|gb|AAO32794.1| scribbled [Drosophila melanogaster]
          Length = 1200

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/324 (35%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHN-----KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
            D++N   L  L+VS N      L+ LPA  G L  L+SL++  N +  +P+ I   T L
Sbjct: 77  PDIQNFENLVELDVSRNDIPDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 136

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            + D   N++++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  L 
Sbjct: 137 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 196

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           N  I+    LT+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  
Sbjct: 197 NE-ISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI 255

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G
Sbjct: 256 LTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELG 315

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVN 319
             T L  L ++GN L  L  SLVN
Sbjct: 316 NCTVLHVLDVSGNQLLYLPYSLVN 339



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 167/348 (47%), Gaps = 43/348 (12%)

Query: 102 SIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           S+ ++P+EI   +  L +    +N +++LP +  R   L     S+N I  LP D+ +  
Sbjct: 24  SLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFE 83

Query: 161 KMSKLDVEGNKLTVLS-NNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQ 216
            + +LDV  N +  +S   L A +  LT+L +    +NLL  +PETI  L++L RLDL  
Sbjct: 84  NLVELDVSRNDIPDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD 143

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L 
Sbjct: 144 NEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLV 203

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ LDL+ N L  LP  I K++ L  L L  N L+ L  +L N               E
Sbjct: 204 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------E 249

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N                       +EL L    LS +P+ I +  ++  L++ RN+++ L
Sbjct: 250 N----------------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 287

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           P E+  CA+L  L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 288 PLEIGQCANLGVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 334



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 113 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 172

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 173 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 232

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 233 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 291

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 292 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 350



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 149/360 (41%), Gaps = 89/360 (24%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN----- 240
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N     
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDM 98

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +L+ LPA+ G L++L +L+L  N LK                       LP  I ++T L
Sbjct: 99  SLTTLPADFGSLTQLESLELRENLLKH----------------------LPETISQLTKL 136

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           ++L L  N +  L         P  L YL                               
Sbjct: 137 KRLDLGDNEIEDL---------PPYLGYLPGL---------------------------H 160

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL L+   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD
Sbjct: 161 ELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPD 220

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            I   LS L+ LKLD N L+++                         N    +  ++QEL
Sbjct: 221 GI-AKLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQEL 254

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L    L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 255 ILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 314



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 8/189 (4%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWP----DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
            I D       A   SL+ L  L+L  N L+ +P +    +  L+ LDL  N I  LP  
Sbjct: 94  DIPDMSLTTLPADFGSLTQLESLELRENLLKHLP-ETISQLTKLKRLDLGDNEIEDLP-- 150

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
           P    LP L EL+L   QL+  P ++  L +L  LD+S+N L+ +P     L SLT+LDL
Sbjct: 151 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 210

Query: 529 SDNNISALP 537
           + N + ALP
Sbjct: 211 AQNLLEALP 219


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 206/439 (46%), Gaps = 39/439 (8%)

Query: 42  WEAVDLQKLI---------------LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           WE  DL+KL                LA+N +  + + + NL  L  L++ +N+L +LP +
Sbjct: 4   WEIEDLKKLDDLEFNKELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDS 63

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG L  L+ LD+  N + ++PD IG+   L + D   N L +LP S+G  + L     + 
Sbjct: 64  IGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNL 123

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE++ +  KM  L +E N+LT+L  + I     L +L  S N L+ +PE+I +L
Sbjct: 124 NRLTLLPENIGNIKKMRSLYIESNELTLLPVS-IGGLQNLEQLFTSSNRLSQIPESICNL 182

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           + L  LD+  N +  +P  I     L +  +GNN LS LP  +  L+ L  LD+  N+L 
Sbjct: 183 TNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELS 242

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E       L  L  L + NN L+ LP  I  +T LR L +  N L  L   + N     +
Sbjct: 243 ELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQI 302

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEIT 383
           L    ++L E               +  R+S     ++L ++   L+ +P  I     + 
Sbjct: 303 LAIANNKLSE---------------LPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLK 347

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNK---IKDWPDAILTSLSSLSCLKLDNNPLR 440
            LD+  N + ++P  +S+  +L+TL+L+ N    I DW   +           +D NP  
Sbjct: 348 VLDIKNNQLTQIPESISNLTNLETLVLTNNPNLFIPDWLRQMNIRFIHYDVNNVDVNPFE 407

Query: 441 QVPSDGFKDIPMLQILDLS 459
               D F  I   Q+ +L+
Sbjct: 408 --VHDVFNKISDEQVEELN 424



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 208/445 (46%), Gaps = 74/445 (16%)

Query: 89  ELHMLKSLD-VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           E+  LK LD + FN  ++          ++ F+ ++N+L  +P S+G  ++L      NN
Sbjct: 5   EIEDLKKLDDLEFNKELQ---------NVISFNLANNELSTIPDSIGNLIHLQQLDIRNN 55

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +  LP+ + +   + +LD+  N+L  L ++ I +   L +L    N LN +PE+IG+L 
Sbjct: 56  ELGQLPDSIGNLIHLQQLDIRNNELGQLPDS-IGNLIHLQQLDIEDNWLNQLPESIGNLI 114

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L+++ NR+  +P +I     +   Y+ +N L+ LP  +G L  L  L   SN+L  
Sbjct: 115 ELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRL-- 172

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                               S +P  I  +T L+ L +  N L  L         P  + 
Sbjct: 173 --------------------SQIPESICNLTNLQMLDIKDNELTQL---------PKHIG 203

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                             K+L +    LS +P  I     +  LD+
Sbjct: 204 KLRKL---------------------------KKLDIGNNELSELPESITNLTHLQMLDI 236

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N + ELP  +S+  +LQ L +  N++   P++I T+L++L  L + NN L Q+P    
Sbjct: 237 GYNELSELPESISNLTNLQELYIENNQLTQLPESI-TNLTNLRMLYIHNNQLSQLPL-RI 294

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            ++  LQIL ++ N ++ LPE    S+L +LQ+LY++  QL   P  I  L  L++LD+ 
Sbjct: 295 GNLTHLQILAIANNKLSELPER--ISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIK 352

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDN 531
            N L  IPE   NLT+L  L L++N
Sbjct: 353 NNQLTQIPESISNLTNLETLVLTNN 377



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 38/332 (11%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           K  +   S NL+N  L  +P             D     + LQ+L + +N + +L + + 
Sbjct: 19  KELQNVISFNLANNELSTIP-------------DSIGNLIHLQQLDIRNNELGQLPDSIG 65

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLD-----------------------VSFNS 102
           NL  L  L++ +N+L +LP +IG L  L+ LD                       V+ N 
Sbjct: 66  NLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNR 125

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ IG+   +      SN+L  LP S+G   NL     S+N ++ +PE + + + +
Sbjct: 126 LTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNL 185

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L  + I     L +L    N L+ +PE+I +L+ L  LD+  N +  +
Sbjct: 186 QMLDIKDNELTQLPKH-IGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSEL 244

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P SIS   +L E Y+ NN L+ LP  +  L+ L  L +H+NQL +  +    L  L +L 
Sbjct: 245 PESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILA 304

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           ++NN LS LP  I  +T L+KL +  N L  L
Sbjct: 305 IANNKLSELPERISNLTNLQKLYIQNNQLTRL 336



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 177/393 (45%), Gaps = 70/393 (17%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           ++ D  K+  L+       V+S NL            + N L+ +P++IG+L  L +LD+
Sbjct: 5   EIEDLKKLDDLEFNKELQNVISFNL------------ANNELSTIPDSIGNLIHLQQLDI 52

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N +  +P SI     L +  + NN L  LP  +G L  L  LD+  N L +       
Sbjct: 53  RNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGN 112

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L +L+++ N L+ LP  IG +  +R L +  N L  L  S+  G    L        
Sbjct: 113 LIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSI--GGLQNL-------- 162

Query: 334 PENEDSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEAGEITK 384
                       E L T + RLS            + L ++   L+ +P  I +  ++ K
Sbjct: 163 ------------EQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKK 210

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           LD+  N + ELP  +++   LQ L +  N++ + P++I ++L++L  L ++NN L Q+P 
Sbjct: 211 LDIGNNELSELPESITNLTHLQMLDIGYNELSELPESI-SNLTNLQELYIENNQLTQLPE 269

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
                                      ++L +L+ LY+   QL + P  I  L  L+IL 
Sbjct: 270 -------------------------SITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILA 304

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           ++ N L  +PE   NLT+L +L + +N ++ LP
Sbjct: 305 IANNKLSELPERISNLTNLQKLYIQNNQLTRLP 337



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 25/311 (8%)

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           F + NN LS +P  +G L  L  LD+ +N+L +       L  L  LD+ NN L  LP  
Sbjct: 27  FNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDS 86

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDLIT 350
           IG +  L++L +  N L  L  S+ N     +L    +RL   PEN  +         I 
Sbjct: 87  IGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGN---------IK 137

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               L + S EL+L       +P  I     + +L  S N + ++P  + +  +LQ L +
Sbjct: 138 KMRSLYIESNELTL-------LPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDI 190

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             N++   P  I   L  L  L + NN L ++P +   ++  LQ+LD+ YN ++ LPE  
Sbjct: 191 KDNELTQLPKHI-GKLRKLKKLDIGNNELSELP-ESITNLTHLQMLDIGYNELSELPE-- 246

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
             S+L +LQELY+   QL + P  I  L  LR+L +  N L  +P    NLT L  L ++
Sbjct: 247 SISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIA 306

Query: 530 DNNISALPPEL 540
           +N +S LP  +
Sbjct: 307 NNKLSELPERI 317



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 18/265 (6%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
            +L+NN LS +P  IG +  L++L +  N L  L  S+ N     L+   +  +  NE  
Sbjct: 27  FNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGN-----LIHLQQLDIRNNELG 81

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +   +  +LI +        ++L +E   L+ +P  I    E+  L+++ N +  LP  +
Sbjct: 82  QLPDSIGNLIHL--------QQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENI 133

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
            +   +++L +  N++   P +I   L +L  L   +N L Q+P +   ++  LQ+LD+ 
Sbjct: 134 GNIKKMRSLYIESNELTLLPVSI-GGLQNLEQLFTSSNRLSQIP-ESICNLTNLQMLDIK 191

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N +  LP++     L  L++L +   +L E P  I  L  L++LD+  N L  +PE   
Sbjct: 192 DNELTQLPKH--IGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESIS 249

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
           NLT+L EL + +N ++ LP  + ++
Sbjct: 250 NLTNLQELYIENNQLTQLPESITNL 274


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 245/564 (43%), Gaps = 51/564 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LSN+ L  +P EV+             +  DL+ L ++ N +  + E +  L  L+ 
Sbjct: 16  TLDLSNQGLTSIPEEVF-------------DITDLEVLDVSKNKLTSIPEAIGRLRKLSR 62

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N L+ L  AIG L  L  L V+ N +  +P  I     L       NQL E+PS 
Sbjct: 63  LHADGNMLTSLQQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSG 122

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    NL     SNN +T+    +    K+ KL + GN+LT +    + S   L  L   
Sbjct: 123 IYLLPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAG-VCSLPNLELLDVD 181

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+  P  +  L +L  L ++ N++   PS +    +LA   + NN +  LP ++ +L
Sbjct: 182 NNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQL 241

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           ++L TL +   Q  E+  +  QL+ L VL         +P E+G +  L+ L L  N LR
Sbjct: 242 TRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLR 301

Query: 312 TLRSSL----------VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           TL S++          ++G        +   LP  E  + S      +  A   +   + 
Sbjct: 302 TLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLEV 361

Query: 362 LSLEGMNLSAIPSEIWEAGEIT---------------------KLDLSRNSIQELPPELS 400
           L + G  L+  P ++ E G                        ++DL+   +  +P E+ 
Sbjct: 362 LDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVF 421

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               L+ L +S N++   P+AI   L  LS L  D N L  +P        ML++  L  
Sbjct: 422 DITDLEVLDVSNNELTSIPEAI-GRLHKLSRLHADGNMLTSLPQ---AIASMLELTHLFI 477

Query: 461 NIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           N   L   PP    L  L  L++   QLRE P  +  L  L +L +  N+L + P G + 
Sbjct: 478 NDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGVCSLPNLEVLCVRSNNLSTFPPGVEK 537

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L  L EL + DN ++ +PP L S+
Sbjct: 538 LQKLRELYIHDNQLTEVPPGLCSL 561



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 44/505 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L++++N +      +  L  L  L ++ N+L+E+PA +  L  L+ LDV  N +  
Sbjct: 128 NLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLST 187

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +   + NQL E PS +    NL+    SNN I  LP+D+   +++  L
Sbjct: 188 FPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTL 247

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V G +       ++   T++  L A     + +P+ +GSL  L  L L +N + ++PS+
Sbjct: 248 SVRGCQFDEFPRQVLQLKTLVV-LYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPST 306

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +S   +L E Y+  N  +  P  L                       C+L  +  LD+SN
Sbjct: 307 MSHMHNLREVYLHGNKFNTFPEVL-----------------------CELPAMEKLDISN 343

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N+++ LP  + +   L  L ++GNPL      +    T A+L +L+ +    E+ +  T 
Sbjct: 344 NNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKA---ENLQLQTV 400

Query: 345 KEDLITMATRLSVTS-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           +  L    T   +TS           + L +    L++IP  I    ++++L    N + 
Sbjct: 401 RGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLT 460

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP  ++S   L  L ++ NK+  +P  +   L  L+ L +++N LR+VP  G   +P L
Sbjct: 461 SLPQAIASMLELTHLFINDNKLSTFPPGV-EKLQKLAHLFMNDNQLREVPP-GVCSLPNL 518

Query: 454 QILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           ++L + S N+++ P  P    L  L+ELY+   QL E P  +  L  L +  +  N L +
Sbjct: 519 EVLCVRSNNLSTFP--PGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELST 576

Query: 513 IPEGFKNLTSLTELDLSDNNISALP 537
           +P G   L  L E+ L +N     P
Sbjct: 577 LPPGMSQLLKLREILLGNNKFDTFP 601



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 206/475 (43%), Gaps = 58/475 (12%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D S+  L  +P  +    +L     S N +TS+PE +    K+S+L  +GN 
Sbjct: 10  TVNGLLTLDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNM 69

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I S   LT L  ++N L  +P  I  L +L  L +  N++  +PS I    +
Sbjct: 70  LTSL-QQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPN 128

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    + NN L+A    + KL KL  L ++ NQL E     C L  L +LD+ NN LS  
Sbjct: 129 LEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTF 188

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKED 347
           PP + K+  LR+L +  N L    S + + P  A+L    +   RLP++           
Sbjct: 189 PPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDD----------- 237

Query: 348 LITMATRLSVTSKE-------------------LSLEGMNLSAIPSEIWEAGEITKLDLS 388
            +T  TRL   S                     L   G     +P E+     +  L L 
Sbjct: 238 -VTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALD 296

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
           +N ++ LP  +S   +L+ + L  NK   +P+ +L  L ++  L + NN + ++P+    
Sbjct: 297 KNLLRTLPSTMSHMHNLREVYLHGNKFNTFPE-VLCELPAMEKLDISNNNITRLPT-ALH 354

Query: 449 DIPMLQILDLSYNIASLP--------------------ENPPFSSLPHLQELYLRRMQLR 488
               L++LD+S N  + P                    EN    ++    ++ L    L 
Sbjct: 355 RADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLT 414

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             P ++  +  L +LD+S N L SIPE    L  L+ L    N +++LP  + S+
Sbjct: 415 SIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASM 469



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 156/354 (44%), Gaps = 53/354 (14%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE------LHMLKS----- 95
           ++KL +++NNI +L   L     L VL+VS N L+  P  + E      L  LK      
Sbjct: 336 MEKLDISNNNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENL 395

Query: 96  ----------LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
                     +D++   +  IP+E+   T L   D S+N+L  +P ++GR   LS   A 
Sbjct: 396 QLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHAD 455

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----------------------IASW 183
            N +TSLP+ +A   +++ L +  NKL+     +                      + S 
Sbjct: 456 GNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGVCSL 515

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L    N L+  P  +  L +L  L +H N++  +P  +    +L  F + NN LS
Sbjct: 516 PNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELS 575

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP  + +L KL  + L +N+   +    C+L  +  LD+ NN+++ LP  + +   L+ 
Sbjct: 576 TLPPGMSQLLKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKD 635

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---------PENEDSEASTTKED 347
           L ++GNPL      +    T A++ +L+            PE + S A    ED
Sbjct: 636 LDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKEGTKKARPEEKGSAAGKATED 689



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 11/257 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFD------EAGEGDKWWEAVD-LQKLILAH--- 54
           L+  R    ++L+++ L  +P EV+   D         E     EA+  L KL   H   
Sbjct: 397 LQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADG 456

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L + + ++  LT L ++ NKLS  P  + +L  L  L ++ N + ++P  + S  
Sbjct: 457 NMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGVCSLP 516

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L      SN L   P  + +   L +    +N +T +P  L   S +    V  N+L+ 
Sbjct: 517 NLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELST 576

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   + +    L E++   N  +  PE +  L  +  LD+  N I  +P+++     L +
Sbjct: 577 LPPGM-SQLLKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKD 635

Query: 235 FYMGNNALSALPAELGK 251
             +  N L+  P ++ K
Sbjct: 636 LDVSGNPLTYPPQDVCK 652


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 212/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D+RNL  LT+L
Sbjct: 162 LDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITTVEKDIRNLSKLTML 208

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG  T +   D   N+L +LP ++
Sbjct: 209 SIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETI 268

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 269 GNLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 328

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L+ALP + 
Sbjct: 329 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDF 386

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 387 GTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 446

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P  + YL+                DL           ++L L    
Sbjct: 447 KLECL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 470

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +Q LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 471 LTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 529

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 530 KLSIMSIENCPLTHLP 545



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 218/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G    L     S N +TSLP+ 
Sbjct: 93  LDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDS 152

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L    K+  LD+  NKL  +   ++   T LT L    N +  + + I +LS+L  L + 
Sbjct: 153 LDSLKKLRMLDLRHNKLREIPP-VVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIR 211

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   CSL    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 212 ENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNL 271

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             ++ L L  N LS +P  + +   L +L L  N +  L     SSLVN  +  L +   
Sbjct: 272 ASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCF 331

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 332 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 376

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ I   L+SL  L L NN L+++P  G  +
Sbjct: 377 NQLTALPLDFGTWTSMVELNLATNQLTKIPEDI-CGLASLEVLILSNNLLKKLP-HGIGN 434

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N +  LP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 435 LRKLRELDLEENKLECLPNE--IAYLKDLQKLVLTNNQLTMLPRGIGHLLNLTHLGLGEN 492

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            LQ +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 493 QLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 526



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 210/447 (46%), Gaps = 47/447 (10%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            S ++ +K P+    AT   K   ++  +KEL     R  N +    S   I +LP  + 
Sbjct: 54  FSVDNTIKRPN---PATGTRKKSSNAEVIKELNKC--REENSTRLDLSKRSIHTLPTSIK 108

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + +++++L +  NKL  L    +   + L  L  S+N L  +P+++ SL +L  LDL  N
Sbjct: 109 ELTQLTELYLYSNKLQSLPAE-VGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHN 167

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           ++  IP  +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  
Sbjct: 168 KLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCS 227

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LD+++N L  LP EIG  T +  L L  N L  L                    PE 
Sbjct: 228 LITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDL--------------------PET 267

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             + AS  +                L L    LSAIP  + +  E+ +L+L  N+I  LP
Sbjct: 268 IGNLASINR----------------LGLRYNRLSAIPRSLAQCRELEELNLENNNISVLP 311

Query: 397 PEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  
Sbjct: 312 EGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSK 371

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L++  N + +LP +  F +   + EL L   QL + P DI  L  L +L LS N L+ +P
Sbjct: 372 LNMKDNQLTALPLD--FGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLP 429

Query: 515 EGFKNLTSLTELDLSDNNISALPPELV 541
            G  NL  L ELDL +N +  LP E+ 
Sbjct: 430 HGIGNLRKLRELDLEENKLECLPNEIA 456



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 348 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPE 407

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +    +L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 408 DICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 466

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L  L  L L +N++  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 467 TNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 526

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  L+ LPP+I  G  + + + L    
Sbjct: 527 LCSKL----------------------SIMSIENCPLTHLPPQIVAGGPSFIIQFLKMQG 564

Query: 309 PLRTL 313
           P R +
Sbjct: 565 PYRAM 569



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 27/166 (16%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           W   V+L    LA N + K+ ED+  L  L VL +S+N L +LP  IG L  L+ LD+  
Sbjct: 389 WTSMVELN---LATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 445

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED----- 155
           N +  +P+EI     L K   ++NQL  LP  +G  LNL+      N +  LPE+     
Sbjct: 446 NKLECLPNEIAYLKDLQKLVLTNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLE 505

Query: 156 -------------------LADCSKMSKLDVEGNKLTVLSNNLIAS 182
                              LA CSK+S + +E   LT L   ++A 
Sbjct: 506 NLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLTHLPPQIVAG 551



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P+ I E  ++T+L L  N +Q LP E+   + L TL LS N +   
Sbjct: 90  STRLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSL 149

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L SL  L  L L +N LR++P   ++ +  L  L L +N  +  E     +L  L 
Sbjct: 150 PDS-LDSLKKLRMLDLRHNKLREIPPVVYR-LTSLTTLYLRFNRITTVEKD-IRNLSKLT 206

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   + T +T LDL  N       
Sbjct: 207 MLSIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPE 266

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 267 TIGNLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLS 316


>gi|428170126|gb|EKX39054.1| hypothetical protein GUITHDRAFT_96825 [Guillardia theta CCMP2712]
          Length = 663

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 226/492 (45%), Gaps = 53/492 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +     +L +L LL +L++S N   EL   IG L  LK L +   ++   
Sbjct: 4   LRKLWLNDNKLVACPTELGSLTLLEMLSLSRNPFDELCLGIGYLTKLKDLQLDQLNLKVP 63

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     +   +   N+L  LP ++G    LS+    +N +  LP+   +   +  L 
Sbjct: 64  PREI----KIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVALH 119

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +    L    T +TEL  ++N +  +P    +L  L  L++  NRI  +P  +
Sbjct: 120 INNNQLDIWPPCL-QYLTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQV 178

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
            G  SL    M +N L ALP  LG+LSK+ +L   +N +  + +E      L  LDLS N
Sbjct: 179 GGWTSLTTLKMDSNRLPALPETLGQLSKVESLSFANNNIITFPMEVGSWHNLRTLDLSKN 238

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  LP  I   T +R+L L GNPL  L         P  +  +R               
Sbjct: 239 DIRFLPSSISNSTAMRQLFLEGNPLIQL---------PLGMGSMRG-------------- 275

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L  +++  +V S+ L L G  +S +P E+ E   +T+L +  N+++ +  E+     L
Sbjct: 276 --LRKLSSSQAVLSRRLDLSGFTISVLPKEVIELTSLTELTMRDNNLKVVVSEIEQLPQL 333

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           + + LS N+IK  P A L  LS L  L +  N L+ +P                   A +
Sbjct: 334 ELVDLSSNRIKMLP-ATLGKLSRLRRLDVRRNRLKHLP-------------------AMI 373

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P    F +L  L++L L   +++E P +I RL  L  L L+ N +  +PE    ++SL  
Sbjct: 374 PREISFCTL--LKDLQLDGNRIQELPIEITRLSSLARLKLNDNCVSVVPEWIGRMSSLRH 431

Query: 526 LDLSDNNISALP 537
           L L +N +  +P
Sbjct: 432 LSLGNNRLQHVP 443



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 49/389 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L ++ N I  L   +     LT L +  N+L  LP  +G+L  ++SL  + N+I+
Sbjct: 159 VNLRHLEVSGNRIYDLPPQVGGWTSLTTLKMDSNRLPALPETLGQLSKVESLSFANNNII 218

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P E+GS   L   D S N ++ LPSS+     +       N +  LP  +     + K
Sbjct: 219 TFPMEVGSWHNLRTLDLSKNDIRFLPSSISNSTAMRQLFLEGNPLIQLPLGMGSMRGLRK 278

Query: 165 -----------LDVEGNKLTVLSNNLIASWTMLTELIA---------------------- 191
                      LD+ G  ++VL   +I   T LTEL                        
Sbjct: 279 LSSSQAVLSRRLDLSGFTISVLPKEVI-ELTSLTELTMRDNNLKVVVSEIEQLPQLELVD 337

Query: 192 -SKNLLNGMPETIGSLSRLIRLDLHQNRILS----IPSSISGCCSLAEFYMGNNALSALP 246
            S N +  +P T+G LSRL RLD+ +NR+      IP  IS C  L +  +  N +  LP
Sbjct: 338 LSSNRIKMLPATLGKLSRLRRLDVRRNRLKHLPAMIPREISFCTLLKDLQLDGNRIQELP 397

Query: 247 AELGKLSKLGTLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            E+ +LS L  L L+ N    + E+      LR   L L NN L  +P  I  +  L  L
Sbjct: 398 IEITRLSSLARLKLNDNCVSVVPEWIGRMSSLR--HLSLGNNRLQHVPYSIS-LLNLAVL 454

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKE 361
            L GNPL ++ + ++ G    LL++LR     N D        D+I    ++   +T  E
Sbjct: 455 TLDGNPLDSIETGVLMGGAKGLLEHLRYN--HNYDIADRNLLPDVIEQRRQVEAYLTRTE 512

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L+ +  S++ +E+   G + +L+++RN
Sbjct: 513 KELQEIEQSSLEAELKVIGGLDQLEIARN 541



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 196/435 (45%), Gaps = 70/435 (16%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV------ 98
           + ++ L +  N + +L   +  L LL+ L++  N+L ELP +   L ML +L +      
Sbjct: 67  IKIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVALHINNNQLD 126

Query: 99  -----------------SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
                            + N+I  +P E  +   L   + S N++ +LP  +G   +L+ 
Sbjct: 127 IWPPCLQYLTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQVGGWTSLTT 186

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
            K  +N + +LPE L   SK+  L    N +       + SW  L  L  SKN +  +P 
Sbjct: 187 LKMDSNRLPALPETLGQLSKVESLSFANNNIITFPME-VGSWHNLRTLDLSKNDIRFLPS 245

Query: 202 TIGSLSRLIRLDLHQNRILSIP---SSISGCCSLA--------EFYMGNNALSALPAELG 250
           +I + + + +L L  N ++ +P    S+ G   L+           +    +S LP E+ 
Sbjct: 246 SISNSTAMRQLFLEGNPLIQLPLGMGSMRGLRKLSSSQAVLSRRLDLSGFTISVLPKEVI 305

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L+ L  L +  N LK    E  QL +L ++DLS+N +  LP  +GK++ LR+L +  N 
Sbjct: 306 ELTSLTELTMRDNNLKVVVSEIEQLPQLELVDLSSNRIKMLPATLGKLSRLRRLDVRRNR 365

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
                           LK+L + +P              I+  T L    K+L L+G  +
Sbjct: 366 ----------------LKHLPAMIPRE------------ISFCTLL----KDLQLDGNRI 393

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P EI     + +L L+ N +  +P  +   +SL+ L L  N+++  P +I  SL +L
Sbjct: 394 QELPIEITRLSSLARLKLNDNCVSVVPEWIGRMSSLRHLSLGNNRLQHVPYSI--SLLNL 451

Query: 430 SCLKLDNNPLRQVPS 444
           + L LD NPL  + +
Sbjct: 452 AVLTLDGNPLDSIET 466



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 156/364 (42%), Gaps = 93/364 (25%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV-----------EACQLRLSV 279
           SL + ++ +N L A P ELG L+ L  L L  N   E C+           +  QL L V
Sbjct: 3   SLRKLWLNDNKLVACPTELGSLTLLEMLSLSRNPFDELCLGIGYLTKLKDLQLDQLNLKV 62

Query: 280 ---------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                    L++  N LS LP  IG +  L +L L  N LR L  S  N           
Sbjct: 63  PPREIKIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKN----------- 111

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                             + M   L + + +L +    L  + S       IT+L ++RN
Sbjct: 112 ------------------LQMLVALHINNNQLDIWPPCLQYLTS-------ITELFMNRN 146

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP------- 443
           +I+ +PPE S+  +L+ L +S N+I D P  +    +SL+ LK+D+N L  +P       
Sbjct: 147 TIEFVPPECSTLVNLRHLEVSGNRIYDLPPQV-GGWTSLTTLKMDSNRLPALPETLGQLS 205

Query: 444 --------SDGFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
                   ++     PM       L+ LDLS N I  LP +   S+   +++L+L    L
Sbjct: 206 KVESLSFANNNIITFPMEVGSWHNLRTLDLSKNDIRFLPSS--ISNSTAMRQLFLEGNPL 263

Query: 488 REAPTDILRLQQLRIL-----------DLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            + P  +  ++ LR L           DLS  ++  +P+    LTSLTEL + DNN+  +
Sbjct: 264 IQLPLGMGSMRGLRKLSSSQAVLSRRLDLSGFTISVLPKEVIELTSLTELTMRDNNLKVV 323

Query: 537 PPEL 540
             E+
Sbjct: 324 VSEI 327



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +AV  ++L L+   I  L +++  L  LT L +  N L  + + I +L  L+ +D+S N 
Sbjct: 283 QAVLSRRLDLSGFTISVLPKEVIELTSLTELTMRDNNLKVVVSEIEQLPQLELVDLSSNR 342

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGR----CLNLSDFKASNNCITSLPEDLAD 158
           I  +P  +G  + L + D   N+LK LP+ + R    C  L D +   N I  LP ++  
Sbjct: 343 IKMLPATLGKLSRLRRLDVRRNRLKHLPAMIPREISFCTLLKDLQLDGNRIQELPIEITR 402

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            S +++L +  N ++V                        +PE IG +S L  L L  NR
Sbjct: 403 LSSLARLKLNDNCVSV------------------------VPEWIGRMSSLRHLSLGNNR 438

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSAL 245
           +  +P SIS   +LA   +  N L ++
Sbjct: 439 LQHVPYSIS-LLNLAVLTLDGNPLDSI 464



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 51/265 (19%)

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLRSRLPENE 337
           L++N L   P E+G +T L  L L+ NP   L   L  G    L    L  L  ++P  E
Sbjct: 9   LNDNKLVACPTELGSLTLLEMLSLSRNPFDEL--CLGIGYLTKLKDLQLDQLNLKVPPRE 66

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                              +  + L + G  LS +P  I     +++L L  N ++ELP 
Sbjct: 67  -------------------IKIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQ 107

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
              +   L  L ++ N++  WP   L  L+S++ L ++ N +  VP              
Sbjct: 108 SAKNLQMLVALHINNNQLDIWPPC-LQYLTSITELFMNRNTIEFVP-------------- 152

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
                      P  S+L +L+ L +   ++ + P  +     L  L +  N L ++PE  
Sbjct: 153 -----------PECSTLVNLRHLEVSGNRIYDLPPQVGGWTSLTTLKMDSNRLPALPETL 201

Query: 518 KNLTSLTELDLSDNNISALPPELVS 542
             L+ +  L  ++NNI   P E+ S
Sbjct: 202 GQLSKVESLSFANNNIITFPMEVGS 226


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 41/383 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 283 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 310

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 311 V----LDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 366

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 367 TLPEEI-KQLKNLKKLYLHNNPL 388



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 188/401 (46%), Gaps = 47/401 (11%)

Query: 139 LSDFKASNN------CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L+ F A  N        T+L E L + +++  LD+  +KL +L    I     L  L + 
Sbjct: 25  LTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSE 83

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL
Sbjct: 84  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 143

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G    
Sbjct: 144 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK--- 200

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                  N P   L K                     IT    L    +EL L+   L+ 
Sbjct: 201 -------NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTV 229

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  
Sbjct: 230 LPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQE 288

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L+ N     P +       LQ+LDL  N +  LPE      L +LQ+L+L R QL   
Sbjct: 289 LNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRLTILPEE--IGQLQNLQKLHLSRNQLTTL 345

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 346 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 386



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 57  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 163

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 222

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQL 342

Query: 311 RTL 313
            TL
Sbjct: 343 TTL 345



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 80  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 126

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 127 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 186

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 187 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 245

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 246 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 305

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 306 FQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 365

Query: 299 -----------TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                       L+KL L  NPL + +   +    P  + Y 
Sbjct: 366 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 407



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 158/352 (44%), Gaps = 65/352 (18%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 368
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L  N L  +P +                          + L +LQEL L   +  
Sbjct: 263 LLVLDLSGNQLTILPKE-------------------------ITQLQNLQELNLEYNRFE 297

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I + Q L++LDL QN L  +PE    L +L +L LS N ++ LP E+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEI 349



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 141/324 (43%), Gaps = 71/324 (21%)

Query: 229 CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             NN L+ LP EIGK+  L++L L  N L TL                    PE      
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE----- 116

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 117 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 165

Query: 402 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 166 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 210

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 211 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L  LDLS N ++ LP E+  +
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQL 283


>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
           echinatior]
          Length = 615

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 194/418 (46%), Gaps = 63/418 (15%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D  ++   L  L L  N ++ +K ++ NL  LT+L+   NK+ ELPA IGEL  L + DV
Sbjct: 220 DVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDV 279

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EIG    L   D   N+L +LP ++G  ++L+      N +TS+P+ LA+
Sbjct: 280 SHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLAN 339

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET---------------- 202
           C  M +  VEGN+++ L + L+AS + LT +  S+NL    P                  
Sbjct: 340 CKLMDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHN 399

Query: 203 ------IGSLSR---LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                  G  SR   L +L++ +N++ ++P  I    ++ E  +G N L+ LP ++  L 
Sbjct: 400 EIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQ 459

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L +N LK        L +L VLDL  N +  LP EIG MT L+KL+L  N L  
Sbjct: 460 SLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNKLTE 519

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         P  + +LR+                     T LSV   +       L+ +
Sbjct: 520 L---------PRTIGHLRN--------------------LTYLSVGENQ-------LTYL 543

Query: 373 PSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           P E+     +  L L+ N S+  LP EL+ C +L  + +    +   P  I+    SL
Sbjct: 544 PEEVGTLESLESLYLNDNKSLHNLPFELALCKNLGIMSIENCPLSHIPMEIVAGGPSL 601



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 212/456 (46%), Gaps = 28/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   I  +P  +     L +F    N+L  LP  +G   NL     S N +T+L
Sbjct: 136 VRRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNL 195

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL V+ + ++   T LT L    N +  +   I +L+ L  L
Sbjct: 196 PNTLENLKSLRVLDLRHNKLIVIPD-VVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTML 254

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
              +N+I  +P+ I    +L  F + +N L  LP E+GK  +L TLD+  N+L +     
Sbjct: 255 SFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDTI 314

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L  L+ L +  N L+ +P  +     + +  + GN +  L   L+     A L YL +
Sbjct: 315 GNLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQISHLPDGLL-----ASLSYLTT 369

Query: 332 RLPENEDSEASTTKEDLITM----ATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
                      T   +L T          V +  +++E   +  IP  I+  +  +TKL+
Sbjct: 370 ----------ITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSKNLTKLN 419

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP ++ S  ++  L L  N++   PD I   L SL  L L NN L+ +P+  
Sbjct: 420 MKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDI-QCLQSLEILILSNNGLKHIPTT- 477

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N I  LP       +  LQ+L L+  +L E P  I  L+ L  L +
Sbjct: 478 IVNLQKLRVLDLEENYIDVLPNE--IGLMTELQKLILQSNKLTELPRTIGHLRNLTYLSV 535

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +N L  +PE    L SL  L L+DN ++  LP EL
Sbjct: 536 GENQLTYLPEEVGTLESLESLYLNDNKSLHNLPFEL 571



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 5/184 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +E  L G  L+ +P EI     +  L LS NS+  LP  L +  SL+ L L  NK+   P
Sbjct: 160 REFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNLPNTLENLKSLRVLDLRHNKLIVIP 219

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D +   L+SL+ L L  N ++ V  +   ++  L +L    N I  LP       L +L 
Sbjct: 220 DVVY-KLTSLTTLFLRFNRVKYV-KNNICNLTNLTMLSFRENKIKELPAG--IGELVNLL 275

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
              +    L   P +I +  QL  LD+  N L  +P+   NL SLT L +  N ++++P 
Sbjct: 276 TFDVSHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPK 335

Query: 539 ELVS 542
            L +
Sbjct: 336 SLAN 339


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 41/383 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 283 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 310

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 311 V----LDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 366

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 367 TLPEEI-KQLKNLKKLYLHNNPL 388



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 189/401 (47%), Gaps = 47/401 (11%)

Query: 139 LSDFKASNN------CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L+ F A  N        T+L E L + +++  LD+  +KL +L    I     L  L + 
Sbjct: 25  LTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSE 83

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL
Sbjct: 84  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 143

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G    
Sbjct: 144 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK--- 200

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                  N P   L K                     IT    L    +EL L+   L+ 
Sbjct: 201 -------NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTV 229

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  
Sbjct: 230 LPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQE 288

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L+ N     P +       LQ+LDL  N + +LP+      L +LQ+L+L R QL   
Sbjct: 289 LNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPKE--IGQLQNLQKLHLSRNQLTTL 345

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 346 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 386



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 57  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 163

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 222

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQL 342

Query: 311 RTL 313
            TL
Sbjct: 343 TTL 345



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 80  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 126

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 127 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 186

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 187 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 245

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 246 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 305

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 306 FQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 365

Query: 299 -----------TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                       L+KL L  NPL + +   +    P  + Y 
Sbjct: 366 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 407



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 159/352 (45%), Gaps = 65/352 (18%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 368
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L  N L  +P +                          + L +LQEL L   +  
Sbjct: 263 LLVLDLSGNQLTILPKE-------------------------ITQLQNLQELNLEYNRFE 297

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I + Q L++LDL QN L ++P+    L +L +L LS N ++ LP E+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEI 349



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 141/324 (43%), Gaps = 71/324 (21%)

Query: 229 CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 116

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 117 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 165

Query: 402 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 166 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 210

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 211 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L  LDLS N ++ LP E+  +
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQL 283


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 178/375 (47%), Gaps = 40/375 (10%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IGEL  L+ LD+ FN I  +P+EIG   +L+  + S NQL  +P  
Sbjct: 65  LNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKE 124

Query: 133 LGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G   +L   F   N+ + +LP+++     + ++D   N+L  L    I     L  L  
Sbjct: 125 IGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKE-IGELQHLQRLFL 183

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG+L  L RLDL +N++ +IP  I    SL    +  N L  +P E+GK
Sbjct: 184 NFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGK 243

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L SN L     E   L+ L VL L +N L+ +P EIG + +L+ L L  N L
Sbjct: 244 LQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLL 303

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                     P P  +  L++                      RL++T          L+
Sbjct: 304 ---------APLPKEIGKLQN--------------------LQRLALTVNA-------LT 327

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI     + +L+L+ N +  LP E+    +LQ L L  N++K  P  I   L SL 
Sbjct: 328 TLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEI-GKLQSLE 386

Query: 431 CLKLDNNPLRQVPSD 445
            L L+ NPL   P +
Sbjct: 387 YLNLNGNPLTSFPEE 401



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 190/395 (48%), Gaps = 40/395 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  + +++  L  L  L++  NK++ LP  IG+L  L  L++SFN +  
Sbjct: 61  NLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTT 120

Query: 106 IPDEIGSATALVK-FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP EIG    L + F   ++QL  LP  +G+  NL +  +S N + +LP+++ +   + +
Sbjct: 121 IPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQR 180

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT +    I +   L  L   KN L  +P+ IG L  L  L L  N++ +IP 
Sbjct: 181 LFLNFNQLTTVPQE-IGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPK 239

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + +N L+ +P E+G L  L  L L  N+L     E   L+ L VL L 
Sbjct: 240 EIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLD 299

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP EIGK+  L++L LT N L TL   + N      L+ L              
Sbjct: 300 RNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGN------LQNL-------------- 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                           KEL+L    L+ +P EI +   + +L L  N ++ LP E+    
Sbjct: 340 ----------------KELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQ 383

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           SL+ L L+ N +  +P+ I   L +L  L L  NP
Sbjct: 384 SLEYLNLNGNPLTSFPEEI-GKLQNLKVLSLVGNP 417



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 197/413 (47%), Gaps = 44/413 (10%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           ++ +L  LP  +G+  NL      +N +T++P+++ +   + KLD+  NK+TVL N  I 
Sbjct: 45  NAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNE-IG 103

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGNN 240
               L +L  S N L  +P+ IG L  L RL L  N +++++P  I    +L E     N
Sbjct: 104 QLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRN 163

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP E+G+L  L  L L+ NQL     E   L+ L  LDL  N L+ +P EIG++ +
Sbjct: 164 QLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQS 223

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L+ N LRT+   +        L+ L+                             
Sbjct: 224 LQGLTLSFNQLRTIPKEI------GKLQNLQG---------------------------- 249

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
             L+L    L+ IP EI     +  L L  N +  +P E+ +  SLQ L L RN +   P
Sbjct: 250 --LTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLP 307

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L +L  L L  N L  +P +   ++  L+ L+L+ N + +LP+      L +LQ
Sbjct: 308 KEI-GKLQNLQRLALTVNALTTLPKE-IGNLQNLKELNLTSNRLTTLPKE--IGKLQNLQ 363

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           EL+L   QL+  P +I +LQ L  L+L+ N L S PE    L +L  L L  N
Sbjct: 364 ELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLVGN 416



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 146/272 (53%), Gaps = 4/272 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ++  + N +  L +++  L  L  L ++ N+L+ +P  IG L  L+ LD+  N +  
Sbjct: 154 NLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTT 213

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG   +L     S NQL+ +P  +G+  NL     ++N + ++P+++ +   +  L
Sbjct: 214 IPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVL 273

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ NKL  +    I +   L  L   +NLL  +P+ IG L  L RL L  N + ++P  
Sbjct: 274 YLDHNKLATIPQE-IGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE 332

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  + +N L+ LP E+GKL  L  L L  NQLK    E  +L+ L  L+L+ 
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNG 392

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           N L+  P EIGK+  L+ L L GNP  +LRS 
Sbjct: 393 NPLTSFPEEIGKLQNLKVLSLVGNP--SLRSQ 422



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 47/350 (13%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L+L  N++ ++P  I     L +  +G N ++ LP E+G+L  L
Sbjct: 49  LTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSL 108

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLS-NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L+L  NQL     E  +L+ L  L L  N+ L  LP EIGK+  L+            
Sbjct: 109 LDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQ------------ 156

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSA 371
                                     E  +++  LIT+   +      + L L    L+ 
Sbjct: 157 --------------------------EMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTT 190

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI     + +LDL +N +  +P E+    SLQ L LS N+++  P  I   L +L  
Sbjct: 191 VPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEI-GKLQNLQG 249

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L +N L  +P +   ++  L++L L +N +A++P+     +L  LQ L L R  L   
Sbjct: 250 LTLTSNGLATIPKE-IGNLQNLKVLYLDHNKLATIPQE--IGNLQSLQVLTLDRNLLAPL 306

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +LQ L+ L L+ N+L ++P+   NL +L EL+L+ N ++ LP E+
Sbjct: 307 PKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEI 356



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 14/202 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LS   LR +P E+ K               +LQ L L  N +  + +++ NL  L V
Sbjct: 226 GLTLSFNQLRTIPKEIGK-------------LQNLQGLTLTSNGLATIPKEIGNLQNLKV 272

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + HNKL+ +P  IG L  L+ L +  N +  +P EIG    L +   + N L  LP  
Sbjct: 273 LYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE 332

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N +T+LP+++     + +L ++ N+L  L    I     L  L  +
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKE-IGKLQSLEYLNLN 391

Query: 193 KNLLNGMPETIGSLSRLIRLDL 214
            N L   PE IG L  L  L L
Sbjct: 392 GNPLTSFPEEIGKLQNLKVLSL 413



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 106/216 (49%), Gaps = 15/216 (6%)

Query: 336 NEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNL-----SAIPSEIWEAGEITKLD 386
           NE  +  T    L   A +L+   KE+    +L+G+NL     + +P EI E   + KLD
Sbjct: 30  NEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLD 89

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPSD 445
           L  N I  LP E+    SL  L LS N++   P  I   L  L  L L  N+ L  +P +
Sbjct: 90  LGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEI-GELQHLQRLFLGFNHQLIALPKE 148

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  LQ +D S N + +LP+      L HLQ L+L   QL   P +I  LQ L+ LD
Sbjct: 149 -IGKLQNLQEMDSSRNQLITLPKE--IGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLD 205

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L +N L +IP+    L SL  L LS N +  +P E+
Sbjct: 206 LDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEI 241


>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
          Length = 534

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 211/441 (47%), Gaps = 58/441 (13%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L +VPN VY                 L  L L  N I+ +++D+RNL  LT+L++  NK+
Sbjct: 134 LCEVPNVVYS-------------LASLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKI 180

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
            ELP+ IG+L  L + DVS N +  +P+E+G    +   D   N+L ++P S+G    L+
Sbjct: 181 KELPSGIGQLFNLSTFDVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLT 240

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                 N + S+P  L++C  M + +VEGN ++ L   L++S T L  +  S+N     P
Sbjct: 241 RLGLRYNRLNSVPRSLSNCVNMDEFNVEGNNISQLPEGLLSSLTKLQSITLSRNAFASYP 300

Query: 201 ETIGSLSRL---IRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +G  ++      ++L  N+I  +P  I S    L +  M +N LS+LP ++G  + + 
Sbjct: 301 --VGGPAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIGTWANMV 358

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L+L +NQL +   +   L  L VL LSNNSL  LP  IG +  LR L L  N L +L  
Sbjct: 359 ELNLGTNQLMKISEDIKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESL-- 416

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  P  + +L+                      T+L V S +       ++++P  
Sbjct: 417 -------PQEIGFLKE--------------------LTKLVVQSNQ-------ITSLPRA 442

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKL 434
           I     +  L    N++  +P E+ +  +L++L ++ N  + + P   L   S+L  + +
Sbjct: 443 IGHLSNLQYLGAGENNLTNIPKEIGTLENLESLYINDNPNLHNLPFE-LALCSNLQIMSI 501

Query: 435 DNNPLRQVPSDGFKDIPMLQI 455
           +N PL Q+PS+     P L I
Sbjct: 502 ENCPLTQIPSEIVNGGPSLVI 522



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 219/462 (47%), Gaps = 57/462 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L+ N+++ L + L NL  L VL++ HNKL E+P  +  L  L  L + FN I 
Sbjct: 99  ANLDTLALSENSLQSLPDTLANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRIK 158

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D+I +   L       N++KELPS +G+  NLS F  S+N +  LPE+L  C +M+ 
Sbjct: 159 VVEDDIRNLKNLTMLSLRENKIKELPSGIGQLFNLSTFDVSHNHLEHLPEELGQCVQMNS 218

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PE+IG+L+ L RL L  NR+ S+P 
Sbjct: 219 LDLQHNELL------------------------DIPESIGNLTLLTRLGLRYNRLNSVPR 254

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S+S C ++ EF +  N +S LP   L  L+KL ++ L  N    Y V       S   ++
Sbjct: 255 SLSNCVNMDEFNVEGNNISQLPEGLLSSLTKLQSITLSRNAFASYPVGGPAQFCSAYSIN 314

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           L +N ++ +P  I  + + L KL +  N L +L   +           +   L  N+  +
Sbjct: 315 LEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDI-----GTWANMVELNLGTNQLMK 369

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            S   +DL+ +          L+L   +L  +P+ I    ++  LDL  N ++ LP E+ 
Sbjct: 370 ISEDIKDLVNLEV--------LTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQEIG 421

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               L  L++  N+I   P AI   LS+L  L    N L  +P    K+I  L+ L+  Y
Sbjct: 422 FLKELTKLVVQSNQITSLPRAI-GHLSNLQYLGAGENNLTNIP----KEIGTLENLESLY 476

Query: 461 NIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDIL 495
               + +NP   +LP       +LQ + +    L + P++I+
Sbjct: 477 ----INDNPNLHNLPFELALCSNLQIMSIENCPLTQIPSEIV 514



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 178/394 (45%), Gaps = 40/394 (10%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           IT+LP  + + S+++++ + GNK   L   L      L  L  S+N L  +P+T+ +L R
Sbjct: 65  ITTLPSSIKELSQLTEIFLYGNKFVTLPPEL-GHLANLDTLALSENSLQSLPDTLANLRR 123

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N++  +P+ +    SL   ++  N +  +  ++  L  L  L L  N++KE 
Sbjct: 124 LRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKIKEL 183

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL  LS  D+S+N L  LP E+G+   +  L L  N L  +  S+ N      L 
Sbjct: 184 PSGIGQLFNLSTFDVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLTRLG 243

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RL     S ++    D             E ++EG N+S +P  +           
Sbjct: 244 LRYNRLNSVPRSLSNCVNMD-------------EFNVEGNNISQLPEGL----------- 279

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
                      LSS   LQ++ LSRN    +P        S   + L++N + +VP   F
Sbjct: 280 -----------LSSLTKLQSITLSRNAFASYPVGGPAQFCSAYSINLEHNQINKVPFGIF 328

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                L  L++  N ++SLP +    +  ++ EL L   QL +   DI  L  L +L LS
Sbjct: 329 SQASCLTKLNMKDNQLSSLPLD--IGTWANMVELNLGTNQLMKISEDIKDLVNLEVLTLS 386

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            NSL+ +P    NL  L  LDL +N + +LP E+
Sbjct: 387 NNSLKRLPATIGNLKKLRHLDLEENKLESLPQEI 420



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 111/254 (43%), Gaps = 36/254 (14%)

Query: 321 PTPALLKYLRSRLPE-NEDSEASTTKEDLITMA-TRLSVTSKELS------LEGMNLSAI 372
           P P ++    SR  + N+  E +  + DL   + T L  + KELS      L G     +
Sbjct: 32  PKPQVVSAKTSRWQQLNKCKENNAIRLDLCKSSITTLPSSIKELSQLTEIFLYGNKFVTL 91

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELS-----------------------SCASLQTLI 409
           P E+     +  L LS NS+Q LP  L+                       S ASL  L 
Sbjct: 92  PPELGHLANLDTLALSENSLQSLPDTLANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLF 151

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           L  N+IK   D I  +L +L+ L L  N ++++PS G   +  L   D+S+N +  LPE 
Sbjct: 152 LRFNRIKVVEDDI-RNLKNLTMLSLRENKIKELPS-GIGQLFNLSTFDVSHNHLEHLPEE 209

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                   +  L L+  +L + P  I  L  L  L L  N L S+P    N  ++ E ++
Sbjct: 210 --LGQCVQMNSLDLQHNELLDIPESIGNLTLLTRLGLRYNRLNSVPRSLSNCVNMDEFNV 267

Query: 529 SDNNISALPPELVS 542
             NNIS LP  L+S
Sbjct: 268 EGNNISQLPEGLLS 281


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 41/383 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 159

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 160 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 219

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 280 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 307

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 308 V----LDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 363

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 364 TLPEEI-KQLKNLKKLYLHNNPL 385



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 188/398 (47%), Gaps = 44/398 (11%)

Query: 139 LSDFKASNN---CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
           L+ F A  N     T+L E L + +++  LD+  +KL +L    I     L  L +  N 
Sbjct: 25  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSENNQ 83

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL  L
Sbjct: 84  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 143

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G       
Sbjct: 144 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK------ 197

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
               N P   L K                     IT    L    +EL L+   L+ +P 
Sbjct: 198 ----NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTVLPK 229

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  L L
Sbjct: 230 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQELNL 288

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + N     P +       LQ+LDL  N +  LPE      L +LQ+L+L R QL   P +
Sbjct: 289 EYNRFEAFPKE-ITQFQNLQVLDLYQNRLTILPEE--IGQLQNLQKLHLSRNQLTTLPKE 345

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 346 IGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 383



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 54  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 160

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 219

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQL 339

Query: 311 RTL 313
            TL
Sbjct: 340 TTL 342



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 77  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 123

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 124 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 183

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 184 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 242

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 243 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 302

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 303 FQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 362

Query: 299 -----------TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                       L+KL L  NPL + +   +    P  + Y 
Sbjct: 363 ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 404



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 165/373 (44%), Gaps = 75/373 (20%)

Query: 181 ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 36  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 95

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 96  NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 155

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 156 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 191

Query: 350 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 192 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 239

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 240 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 276

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
               + L +LQEL L   +    P +I + Q L++LDL QN L  +PE    L +L +L 
Sbjct: 277 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLH 333

Query: 528 LSDNNISALPPEL 540
           LS N ++ LP E+
Sbjct: 334 LSRNQLTTLPKEI 346



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 142/321 (44%), Gaps = 68/321 (21%)

Query: 229 CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 22  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 81

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L++L L  N L TL                    PE         
Sbjct: 82  NQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE-------- 113

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 114 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 165

Query: 405 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 207

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 208 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 259

Query: 523 LTELDLSDNNISALPPELVSV 543
           L  LDLS N ++ LP E+  +
Sbjct: 260 LLVLDLSGNQLTILPKEITQL 280


>gi|260809195|ref|XP_002599392.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
 gi|229284669|gb|EEN55404.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
          Length = 642

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 211/480 (43%), Gaps = 68/480 (14%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLN 138
           L   P ++  L  ++ L +  NS+  +P E+  + T L       N L+ LP+  G    
Sbjct: 52  LCSFPESVLNLTHVQKLVLDHNSLTSLPGELCHTLTHLRVLSVMGNDLETLPTLFGNLTL 111

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L +  A  NC+  LP+  +D  ++  L + GN+L  L ++       L  L+  +N L  
Sbjct: 112 LRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSD-FGRLEHLETLMVDENHLKT 170

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+T GSL RL R D   N++ ++P S  G   L    +  N LS LP   G L +L  +
Sbjct: 171 LPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEV 230

Query: 259 DLHSNQL----KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           +L  N L    K+     C  +L V    NN L  LPP +G ++ +++L L  N      
Sbjct: 231 ELSGNSLSFLTKDLKSSHCLRKLYV---DNNVLKELPPWVGHLSLIQELSLRDN------ 281

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             L+N P P                          +   R   T + L L G  ++A+P+
Sbjct: 282 -KLMNQPLPE-------------------------SFPARSGQTLRLLDLSGNFITALPA 315

Query: 375 EIWEAGEITKL-------DLSRNSIQE------LPPELSSCASLQTLILSRNKIKDWPDA 421
            + + G +  L       +L R   Q       LP        L+ L L  N++   PD+
Sbjct: 316 SLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLKMLHLDENQLTHLPDS 375

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
              SL SL  L +  N L+++P D F ++  LQ+L         P N  F  L  L +L 
Sbjct: 376 F-GSLGSLEFLDVGQNWLKELP-DSFCELSNLQLL---------PSN--FGRLSSLVDLR 422

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L    L E P     L+QLR LDL  N L+ +P   K+LT +T LD+  N  S LPPELV
Sbjct: 423 LDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTGITRLDMDKNKFS-LPPELV 481



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 189/410 (46%), Gaps = 42/410 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L    N +++L +   +L  L +L ++ N+L  LP+  G L  L++L V  N +  +
Sbjct: 112 LRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSDFGRLEHLETLMVDENHLKTL 171

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P   GS   L +FD S+N+L+ LP S G    L     S N ++ LPE   D  ++ +++
Sbjct: 172 PKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVE 231

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS--IPS 224
           + GN L+ L+ +L +S   L +L    N+L  +P  +G LS +  L L  N++++  +P 
Sbjct: 232 LSGNSLSFLTKDLKSSHC-LRKLYVDNNVLKELPPWVGHLSLIQELSLRDNKLMNQPLPE 290

Query: 225 SISGCC--SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           S       +L    +  N ++ALPA LG+L  L +L L S  + E      Q        
Sbjct: 291 SFPARSGQTLRLLDLSGNFITALPASLGQLGSLESLHLGS-AIGELERRHFQ-------- 341

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           + N L  LP   G++  L+ L L  N L  L  S  +  +   L   ++ L E  DS   
Sbjct: 342 NGNWLCALPENFGRLRHLKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKELPDSFC- 400

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                             ELS    NL  +PS       +  L L  N + ELP   +  
Sbjct: 401 ------------------ELS----NLQLLPSNFGRLSSLVDLRLDNNMLGELPESFAEL 438

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN----PLRQVPSDGFK 448
             L+TL L  N++++ P A L  L+ ++ L +D N    P   VP+  FK
Sbjct: 439 RQLRTLDLFCNELREVPGA-LKHLTGITRLDMDKNKFSLPPELVPNIIFK 487


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 182/380 (47%), Gaps = 39/380 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L   
Sbjct: 32  LTEALQNPTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVL 91

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             S N+L  LP  +     L +     N +T+LP+D+    ++ +L ++ N+LT L    
Sbjct: 92  HLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKE- 150

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L    N L  +P+ IG L  L  L L+ N++ ++P  I     L   ++ +
Sbjct: 151 IGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYD 210

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+GKL  L  L+L +NQLK    E  QL+ L VL+LS+N L+ LP +IGK+ 
Sbjct: 211 NQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQ 270

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L LT N L TL         P  + YL+                        L + 
Sbjct: 271 NLQELYLTNNQLTTL---------PKDIGYLKE-----------------------LQI- 297

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L L    L  +P EI +   +  L+LS N +  LP ++    +LQ L L+ N++   
Sbjct: 298 ---LELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTL 354

Query: 419 PDAILTSLSSLSCLKLDNNP 438
           P  I   L  L  L LD+ P
Sbjct: 355 PKDI-GYLKELQILHLDDIP 373



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 25/292 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI------GELHM------- 92
           +LQ L L +N +  L +++ +L  L VL++SHNKL+ LP  I       ELH+       
Sbjct: 64  NLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTT 123

Query: 93  ----------LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                     L+ L + +N +  +P EIG    L       NQL  LP  +G    L   
Sbjct: 124 LPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVL 183

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N +T+LP+++    ++  L +  N+LT L    I     L  L  + N L  +P+ 
Sbjct: 184 HLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKE-IGKLQNLQVLELTNNQLKTLPKE 242

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L  N++ ++P+ I    +L E Y+ NN L+ LP ++G L +L  L+L +
Sbjct: 243 IGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTN 302

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NQLK    E  QL+ L VL+LS+N L+ LP +IGK+  L++L LT N L TL
Sbjct: 303 NQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTL 354



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 164/356 (46%), Gaps = 49/356 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L  +P E+                 +LQ L L+HN +  L +D+ +L  L  L
Sbjct: 68  LDLTNNQLTALPKEI-------------EHLKELQVLHLSHNKLTSLPKDIEHLKELQEL 114

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  I  L  L+ L + +N +  +P EIG    L       NQL  LP  +
Sbjct: 115 HLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEI 174

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L      +N +T+LP+++    ++  L +  N+LT L    I     L  L  + 
Sbjct: 175 GYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKE-IGKLQNLQVLELTN 233

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L+L  N++ ++P+ I    +L E Y+ NN L+ LP ++G L 
Sbjct: 234 NQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLK 293

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLS-----------------------NNSLSG 289
           +L  L+L +NQLK    E  QL+ L VL+LS                       NN L+ 
Sbjct: 294 ELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTT 353

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           LP +IG +  L+ L L   P   LRS           K +R  LPE   +    TK
Sbjct: 354 LPKDIGYLKELQILHLDDIP--ALRSQ---------EKKIRKLLPEAHIAFTKITK 398



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 158/306 (51%), Gaps = 19/306 (6%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + +N L+ LP ++G+L  L  LDL +NQL     E   L+ L VL LS+N L+ LP +I 
Sbjct: 47  LKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIE 106

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            +  L++L L  N L TL         P  +++L+     + D    TT    I     L
Sbjct: 107 HLKELQELHLDYNQLTTL---------PKDIEHLKELQELHLDYNQLTTLPKEIGYLKEL 157

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            V    L L    L+ +P EI    E+  L L  N +  LP E+     LQ L L  N++
Sbjct: 158 QV----LHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQL 213

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P  I   L +L  L+L NN L+ +P +    +  LQ+L+LS+N + +LP +     L
Sbjct: 214 TTLPKEI-GKLQNLQVLELTNNQLKTLPKE-IGQLQNLQVLNLSHNKLTTLPND--IGKL 269

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQELYL   QL   P DI  L++L+IL+L+ N L+++P+    L +L  L+LS N ++
Sbjct: 270 QNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLT 329

Query: 535 ALPPEL 540
            LP ++
Sbjct: 330 TLPKDI 335



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 171/350 (48%), Gaps = 44/350 (12%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  LDL  N++ ++P  I     L   ++ +N L++LP ++  L 
Sbjct: 50  NQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLK 109

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L  NQL     +   L+ L  L L  N L+ LP EIG +  L+ L L  N L T
Sbjct: 110 ELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTT 169

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           L         P  + YL+  ++    D++ +T  ++ I     L V    L L    L+ 
Sbjct: 170 L---------PKEIGYLKELQVLHLYDNQLTTLPKE-IGYLKELQV----LHLYDNQLTT 215

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  L+L+ N ++ LP E+    +LQ L LS NK+   P+ I   L +L  
Sbjct: 216 LPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDI-GKLQNLQE 274

Query: 432 LKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L NN L  +P D G+  +  LQIL+L+ N                        QL+  
Sbjct: 275 LYLTNNQLTTLPKDIGY--LKELQILELTNN------------------------QLKTL 308

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +LQ L++L+LS N L ++P+    L +L EL L++N ++ LP ++
Sbjct: 309 PKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDI 358



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           YN+    +NP    +     L L+  QL   P DI +LQ L++LDL+ N L ++P+  ++
Sbjct: 30  YNLTEALQNPTDVRI-----LDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEH 84

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L  L  L LS N +++LP ++
Sbjct: 85  LKELQVLHLSHNKLTSLPKDI 105


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 231/507 (45%), Gaps = 57/507 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L+ 
Sbjct: 17  TLDLSNQGLTSIPEEVF-------------DITDLEFLDVSNNKLTSIPEAIGRLQNLSR 63

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N ++ LP AI  L  LK L V  N++ ++PD +     L       N+LK+LP+ 
Sbjct: 64  LDADGNMMTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTK 123

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +  CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L +L   
Sbjct: 124 IFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEKLSVY 182

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+  P  +  L +L  L ++ N++  +PS +    +L +  + NN LS  P  + KL
Sbjct: 183 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKL 242

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L +H NQL E     C L  L  L + NN+LS  PP + K+  LR+L +  N L 
Sbjct: 243 QKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLT 302

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            + S + + P                                 L V    LS+    +  
Sbjct: 303 EVPSGVCSLPN--------------------------------LEV----LSVGNNPIRC 326

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW---PDAILTSLSS 428
           +P E+     +  L +      E P ++    +L+ L   +N  + +   PD +  +L  
Sbjct: 327 LPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEV-GNLQH 385

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L+NN LR +PS       + Q+   +    + PE      LP +++L ++   + 
Sbjct: 386 LWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPE--VLCELPAMEKLDIKNNNIT 443

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPE 515
             PT + R  +LR LD+S N L   P+
Sbjct: 444 RIPTALHRADKLRDLDVSGNPLTYPPQ 470



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 202/454 (44%), Gaps = 40/454 (8%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D S+  L  +P  +    +L     SNN +TS+PE +     +S+LD +GN 
Sbjct: 11  TVNGLLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +T L    I+S   L +L    N L+ +P+ +  L  L  L +  N++  +P+ I  C +
Sbjct: 71  MTSLP-QAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLN 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L  F   NN LS  P  + KL KL  L ++ NQL E     C L  L  L + NN+LS  
Sbjct: 130 LVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTF 189

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L + GN L  + S + + P    L    + L     S      E L  
Sbjct: 190 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNL-----STFPPGVEKLQK 244

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +        +EL +    L+ +PS +     + KL +  N++   PP +     L+ L +
Sbjct: 245 L--------RELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYI 296

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLR---------------QVPSDGFKDIP--ML 453
             N++ + P  +  SL +L  L + NNP+R                VPS  F + P  +L
Sbjct: 297 HHNQLTEVPSGV-CSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVL 355

Query: 454 QILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLS 506
           Q+  L    A       F  +P       HL  L L    LR  P+ +  L  LR + L 
Sbjct: 356 QLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLW 415

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N   + PE    L ++ +LD+ +NNI+ +P  L
Sbjct: 416 NNKFDTFPEVLCELPAMEKLDIKNNNITRIPTAL 449



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 180/402 (44%), Gaps = 68/402 (16%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +TS+PE++ D + +  LDV  NKLT                         +PE IG
Sbjct: 21  SNQGLTSIPEEVFDITDLEFLDVSNNKLT------------------------SIPEAIG 56

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L RLD   N + S+P +IS    L + Y+ +N LS LP  L  L  L  L +  N+
Sbjct: 57  RLQNLSRLDADGNMMTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNK 116

Query: 265 LKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           LK+   +  +C L L   D SNN+LS  PP + K+  LR+L + GN L  + S + + P 
Sbjct: 117 LKKLPTKIFSC-LNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPN 175

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
                                                ++LS+   NLS  P  + +  ++
Sbjct: 176 ------------------------------------LEKLSVYNNNLSTFPPGVEKLQKL 199

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            +L +  N + E+P  + S  +L+ L +  N +  +P  +   L  L  L + +N L +V
Sbjct: 200 RELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGV-EKLQKLRELYIHDNQLTEV 258

Query: 443 PSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           PS G   +P L+ L + + N+++ P  P    L  L+ELY+   QL E P+ +  L  L 
Sbjct: 259 PS-GVCSLPNLEKLSVYNNNLSTFP--PGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLE 315

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +L +  N ++ +P+    LT +  L +        P +++ +
Sbjct: 316 VLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVLQL 357



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 28/354 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL + +NN+      +  L  L  L +  N+L+E+P+ +  L  L+ L V  N++  
Sbjct: 175 NLEKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLST 234

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN +++ P  +    K+ +L
Sbjct: 235 FPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLREL 294

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT + +  + S   L  L    N +  +P+ +  L+R+  L +   +    P  
Sbjct: 295 YIHHNQLTEVPSG-VCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQ 353

Query: 226 ISGCCSLAEFYMG--------------------------NNALSALPAELGKLSKLGTLD 259
           +    +L   Y G                          NN L  LP+ +  L  L  + 
Sbjct: 354 VLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQ 413

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L +N+   +    C+L  +  LD+ NN+++ +P  + +   LR L ++GNPL      + 
Sbjct: 414 LWNNKFDTFPEVLCELPAMEKLDIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDVC 473

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
              T A++ +L+    ++E   ++  +  +    T+    ++ L L    + AI
Sbjct: 474 KQGTGAIMAFLKQEAEKDERILSAFNRLSVRMSQTQWKPLARSLGLSNRAMDAI 527



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 22/348 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+T+  L   + LDL    + SIP  +     L    + NN L+++P  +G+L  L
Sbjct: 5   LNLQPQTVNGL---LTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNL 61

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD   N +         L+ L  L + +N+LS LP  +  +  L  L +  N L+ L 
Sbjct: 62  SRLDADGNMMTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLP 121

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           + +      + L  +      N  S      E L  +        +EL + G  L+ +PS
Sbjct: 122 TKIF-----SCLNLVNFDASNNNLSTFPPGVEKLQKL--------RELYIYGNQLTEVPS 168

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            +     + KL +  N++   PP +     L+ L +  N++ + P  +  SL +L  L +
Sbjct: 169 GVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGV-CSLPNLEKLSV 227

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 493
            NN L   P  G + +  L+ L +  N   L E P    SLP+L++L +    L   P  
Sbjct: 228 YNNNLSTFPP-GVEKLQKLRELYIHDN--QLTEVPSGVCSLPNLEKLSVYNNNLSTFPPG 284

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           + +LQ+LR L +  N L  +P G  +L +L  L + +N I  LP E+ 
Sbjct: 285 VEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSVGNNPIRCLPDEVT 332



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 18/268 (6%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LDLSN  L+ +P E+  +T L  L ++ N L ++  ++        L+ L SRL  +
Sbjct: 15  LLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAI------GRLQNL-SRL--D 65

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            D    T+    I+    L    K+L +   NLS +P  + +   +  L +  N +++LP
Sbjct: 66  ADGNMMTSLPQAISSLQGL----KQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLP 121

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            ++ SC +L     S N +  +P  +   L  L  L +  N L +VPS G   +P L+ L
Sbjct: 122 TKIFSCLNLVNFDASNNNLSTFPPGV-EKLQKLRELYIYGNQLTEVPS-GVCSLPNLEKL 179

Query: 457 DL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            + + N+++ P  P    L  L+ELY+   QL E P+ +  L  L  L +  N+L + P 
Sbjct: 180 SVYNNNLSTFP--PGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPP 237

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
           G + L  L EL + DN ++ +P  + S+
Sbjct: 238 GVEKLQKLRELYIHDNQLTEVPSGVCSL 265



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 14  LNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           L++ N  +R +P+EV +             FDE     +  +   L+ L    N   K  
Sbjct: 317 LSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPR--QVLQLKTLEMLYAGQNGGRKFD 374

Query: 62  ---EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
              +++ NL  L  L + +N L  LP+ +  LH L+ + +  N     P+ +    A+ K
Sbjct: 375 MVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEK 434

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            D  +N +  +P++L R   L D   S N +T  P+D+ 
Sbjct: 435 LDIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDVC 473


>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
 gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
          Length = 577

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 210/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++DL+ LP LT+L
Sbjct: 169 LDLRHNKLREIPPVVYR-------------LSSLTTLFLRFNRITAVEKDLKMLPKLTML 215

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 216 SIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 275

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS++ +L++E N ++ L   L++S   +  L  ++
Sbjct: 276 GNLSSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLAR 335

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 336 NCFQSYP--VGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 393

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  + VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 394 GTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 453

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 454 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 477

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 478 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 536

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 537 KLSIMSIENCPLSHLP 552



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 223/478 (46%), Gaps = 51/478 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD++  SI  +P  I   T + +     N+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 100 LDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDS 159

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  +   ++   + LT L    N +  + + +  L +L  L + 
Sbjct: 160 LDNLKKLCMLDLRHNKLREIPP-VVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIR 218

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 219 ENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 278

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 279 SSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCF 338

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ S             S+ S  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 339 QSYPVGGPSQFS-------------SIYS--LNMEHNRINKIPFGIFSRAKVLSKLNMKD 383

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L S+  L L NN L+++P  G  +
Sbjct: 384 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSIEVLILSNNLLKKLP-HGIGN 441

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 442 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 499

Query: 509 SLQSIPEGFKNLTSLTELDLSDNN------------------------ISALPPELVS 542
            L  +PE    L +L EL L+DN                         +S LPP++V+
Sbjct: 500 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVA 557



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 217/476 (45%), Gaps = 45/476 (9%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L+++   +  LP +I +L  +  L +  N +  +P E+G+   LVK   S N L  LP
Sbjct: 98  TRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLP 157

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SL     L      +N +  +P  +   S ++ L +  N++T +  +L      LT L 
Sbjct: 158 DSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFNRITAVEKDL-KMLPKLTMLS 216

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L  LI LD+  N++  +P  I  C  +    + +N L  LP  +G
Sbjct: 217 IRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 276

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            LS L  L L  N+L      +  C   L  L+L NN++S LP                 
Sbjct: 277 NLSSLSRLGLRYNRLSAVPRSLSKCS-ELDELNLENNNISTLP----------------- 318

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
               L SSLV   +  L +      P    S+ S             S+ S  L++E   
Sbjct: 319 --EGLLSSLVKVNSLTLARNCFQSYPVGGPSQFS-------------SIYS--LNMEHNR 361

Query: 369 LSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   P+ + + L 
Sbjct: 362 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLV 420

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           S+  L L NN L+++P  G  ++  L+ LDL  N + SLP     + L  LQ+L L   Q
Sbjct: 421 SIEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQ 477

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           L   P  I  L  L  L L +N L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 478 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 533



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 355 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 414

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   +++     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 415 DVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 473

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 474 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 533

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 534 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 571

Query: 309 PLRTL 313
           P R +
Sbjct: 572 PYRAM 576



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 369 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 415

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  + VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 416 VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 475

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 476 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 535

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 536 SKLSIMSIENCPLSHLPPQIVAG 558


>gi|28261015|gb|AAO32791.1| scribbled [Drosophila melanogaster]
          Length = 1205

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 172/326 (52%), Gaps = 22/326 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHN-------KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
            D++N   L  L+VS N        L+ LPA  G L  L+SL++  N +  +P+ I   T
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLT 136

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + D   N++++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  
Sbjct: 137 KLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEE 196

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L N  I+    LT+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E
Sbjct: 197 LPNE-ISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQE 255

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPE 293
             +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE
Sbjct: 256 LILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPE 315

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +G  T L  L ++GN L  L  SLVN
Sbjct: 316 LGNCTVLHVLDVSGNQLLYLPYSLVN 341



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 45/350 (12%)

Query: 102 SIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           S+ ++P+EI   +  L +    +N +++LP +  R   L     S+N I  LP D+ +  
Sbjct: 24  SLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFE 83

Query: 161 KMSKLDVEGNKLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
            + +LDV  N +  +  +L        S T L  L   +NLL  +PETI  L++L RLDL
Sbjct: 84  NLVELDVSRNDIPDIDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDL 143

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   
Sbjct: 144 GDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISG 203

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L+ LDL+ N L  LP  I K++ L  L L  N L+ L  +L N              
Sbjct: 204 LVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC------------- 250

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
            EN                       +EL L    LS +P+ I +  ++  L++ RN+++
Sbjct: 251 -EN----------------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALE 287

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            LP E+  CA+L  L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 288 YLPLEIGQCANLGVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 336



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 115 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 174

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 175 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 234

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 235 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 293

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 294 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 352



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 10/191 (5%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILT------SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
            I D   ++ T      SL+ L  L+L  N L+ +P +    +  L+ LDL  N I  LP
Sbjct: 94  DIPDIDMSLTTLPADFGSLTQLESLELRENLLKHLP-ETISQLTKLKRLDLGDNEIEDLP 152

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
             P    LP L EL+L   QL+  P ++  L +L  LD+S+N L+ +P     L SLT+L
Sbjct: 153 --PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDL 210

Query: 527 DLSDNNISALP 537
           DL+ N + ALP
Sbjct: 211 DLAQNLLEALP 221



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 149/362 (41%), Gaps = 91/362 (25%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN----- 240
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N     
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 241 --ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT 298
             +L+ LPA+ G L++L +L+L  N LK                       LP  I ++T
Sbjct: 99  DMSLTTLPADFGSLTQLESLELRENLLKH----------------------LPETISQLT 136

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L L  N +  L         P  L YL                             
Sbjct: 137 KLKRLDLGDNEIEDL---------PPYLGYLPGL-------------------------- 161

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
             EL L+   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  
Sbjct: 162 -HELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEAL 220

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD I   LS L+ LKLD N L+++                         N    +  ++Q
Sbjct: 221 PDGI-AKLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQ 254

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L    L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPP
Sbjct: 255 ELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPP 314

Query: 539 EL 540
           EL
Sbjct: 315 EL 316



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 11/96 (11%)

Query: 447 FKDIPML-----QILDLSYNIASLPENPP----FSSLPHLQELYLRRMQLREAPTDILRL 497
           FK IP+      Q+  ++    SLP+ P     +S    L+EL+L    +R+ P +  RL
Sbjct: 2   FKCIPIFKGCNRQVEFVNKRHCSLPQVPEEILRYSRT--LKELFLDANHIRDLPKNFFRL 59

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
            +LR L LS N +  +P   +N  +L ELD+S N+I
Sbjct: 60  HRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI 95


>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
          Length = 495

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 232/517 (44%), Gaps = 83/517 (16%)

Query: 20  SLRDVPNEV------YKNFDEA------GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNL 67
            LR  P E+      +  + EA      GEG+  +    LQ+++L HNNI+ L   +  +
Sbjct: 2   GLRQFPPELVTALSSFWEYSEARGVFLTGEGNLKY----LQEVVLDHNNIQILPAVISQM 57

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  LN S N +  LPA++G L  LKSLD+S N ++ I +EI +   L +     N++ 
Sbjct: 58  PCLESLNASANLIQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEIT 117

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           E+P  +    +L +F  S N +  LP  L   + +  L V  N L+ +  +LI     LT
Sbjct: 118 EVPECISALQSLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIP-DLIFKIQTLT 176

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +LI  +N +  +P+ +G L+ L  L L  N++ ++P  I     L    +  N ++ LP 
Sbjct: 177 KLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPD 236

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            +  L+ L  L  + N++  + +      QL +  L LS N +S + P + K+T L  L 
Sbjct: 237 SIEHLTSLKELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILN 296

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ +  S+ N                          E L+T +            
Sbjct: 297 LNSNRLQKIPESIRN-------------------------LEQLVTFSC----------- 320

Query: 365 EGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            G N +  IP EI E   + +L L  N+I+ + PEL     L+ L LS+N++ D P  +L
Sbjct: 321 -GSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQML 379

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
            +L++L  L L  N L  +PS                             L HL++L+L+
Sbjct: 380 KTLTNLKELWLAFNHLHSIPSS-------------------------IGYLKHLEQLWLQ 414

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
             +L   P  I  L+ L +L L+ N +  +P+  K L
Sbjct: 415 DNELESLPPQIGSLKNLNVLTLTGNRISELPDSLKRL 451



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 197/439 (44%), Gaps = 48/439 (10%)

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G+   L +     N ++ LP+ + +   L    AS N I +LP  + +   +  LD+   
Sbjct: 32  GNLKYLQEVVLDHNNIQILPAVISQMPCLESLNASANLIQTLPASVGNLISLKSLDL--- 88

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                                SKN L  + E I +L  L +L LH+N I  +P  IS   
Sbjct: 89  ---------------------SKNGLVAIHEEISNLVNLEQLKLHENEITEVPECISALQ 127

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           SL EF +  N L  LP  L +L+ L  L +  N L E      +++ L+ L L  N ++ 
Sbjct: 128 SLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLILVENHITK 187

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P E+G +T L  L+LT N L+TL   +       L K     L EN  +E   + E L 
Sbjct: 188 VPKELGLLTNLTDLVLTYNKLKTLPKEI-----GELWKLDYLVLDENMITELPDSIEHLT 242

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAG--EITKLDLSRNSIQELPPELSSCASLQT 407
           ++        KELS     ++  P  +      EI +L LS N I  + P L     L  
Sbjct: 243 SL--------KELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTI 294

Query: 408 LILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           L L+ N+++  P++I  L  L + SC    +N +  +P +  +   + Q++    NI  +
Sbjct: 295 LNLNSNRLQKIPESIRNLEQLVTFSC---GSNFIEDIPPEICELDNLRQLVLFGNNIRHV 351

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLT 524
              P    L  L+ L L + QL + P  +L+ L  L+ L L+ N L SIP     L  L 
Sbjct: 352 C--PELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLE 409

Query: 525 ELDLSDNNISALPPELVSV 543
           +L L DN + +LPP++ S+
Sbjct: 410 QLWLQDNELESLPPQIGSL 428



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 38/264 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+   L+ +P E+         G+ W     L  L+L  N I +L + + +L  L  L
Sbjct: 201 LVLTYNKLKTLPKEI---------GELW----KLDYLVLDENMITELPDSIEHLTSLKEL 247

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSF-------------------------NSIMKIPD 108
           + + N+++  P ++G L  L+ L++S                          N + KIP+
Sbjct: 248 SFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLNSNRLQKIPE 307

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            I +   LV F C SN ++++P  +    NL       N I  +  +L   + +  L + 
Sbjct: 308 SIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLS 367

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT +   ++ + T L EL  + N L+ +P +IG L  L +L L  N + S+P  I  
Sbjct: 368 QNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDNELESLPPQIGS 427

Query: 229 CCSLAEFYMGNNALSALPAELGKL 252
             +L    +  N +S LP  L +L
Sbjct: 428 LKNLNVLTLTGNRISELPDSLKRL 451


>gi|195146072|ref|XP_002014014.1| GL24452 [Drosophila persimilis]
 gi|194102957|gb|EDW25000.1| GL24452 [Drosophila persimilis]
          Length = 655

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 158/582 (27%), Positives = 264/582 (45%), Gaps = 83/582 (14%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN+ L  VP+ +Y + +EA               + D WW  V L  L 
Sbjct: 74  KLARKSGTLNLSNKGLASVPDRLY-DINEADAESKAATLEQLSIKDEDAWWNQVPLTNLD 132

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  +   + NL  LTVL +  N L +LPA IG+L  L  L+VS N +  +P E+ 
Sbjct: 133 LSSNALSHISPKIENLQSLTVLILHDNALVDLPAEIGKLEKLMRLNVSRNKLCDLPRELY 192

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           S   L   + S N+  EL   +     L    A +N I SLP  +    +++ L +  N 
Sbjct: 193 SLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNH 252

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  L  +L+ +   L  L   +N L  +PE +G L +L  L +  N IL + +   G  +
Sbjct: 253 IKDLPPDLV-NMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDILEL-TDFEGNET 310

Query: 232 LAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 289
           L E +  NN +S +P  + + L  L  LDL  N++ +   E      L+ LD+SNNS+  
Sbjct: 311 LTELHASNNYISNIPVRMCENLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDT 370

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTT---- 344
           LP  +  +  L  L + GNP++++R  ++   T  +L+ L+ R + +++D   S +    
Sbjct: 371 LPVSLAALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMAKSKDEGESDSGAGA 430

Query: 345 --------KEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSI 392
                    +       R  +  ++ L++    ++ +P E+++  +   +  +D +RN +
Sbjct: 431 RLCGGQAGNDTAANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQL 490

Query: 393 QELPPELSSCASLQT-LILSRNKIKDWPDAI----------------------LTSLSSL 429
           + +P  L    ++ T L+L+ N+I   P  I                         L++L
Sbjct: 491 RTVPNGLQHMQNIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTL 550

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L + NN    +PS G  D+  L+IL  S N              H+ EL +  +Q   
Sbjct: 551 RELNIANNRFSFLPS-GLYDLQGLEILIASDN--------------HINELNVAGLQ--- 592

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
                 R+ +L  LDL  N +  IP     LT++T L+L  N
Sbjct: 593 ------RMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGN 628



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 138/324 (42%), Gaps = 55/324 (16%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L VL++  NK+++LP  +  L  L  LDVS NSI  +P  + +   L+      N 
Sbjct: 331 NLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLAALAHLISLQVEGNP 390

Query: 126 LKELPSSLGRC----------------------------LNLSDFKASNNC--------- 148
           +K +   + +C                              L   +A N+          
Sbjct: 391 IKSIRRDILQCGTSRILRTLQERSMAKSKDEGESDSGAGARLCGGQAGNDTAANYPDRYK 450

Query: 149 -------------ITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                        IT +PE+   LA    +  +D   N+L  + N L     ++TEL+ +
Sbjct: 451 LRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPNGLQHMQNIVTELVLA 510

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ I   +R+  L+L  N +  +P       +L E  + NN  S LP+ L  L
Sbjct: 511 HNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTLRELNIANNRFSFLPSGLYDL 570

Query: 253 SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L    N + E  V   Q   RLS LDL NN +  +PP +G +T +  L L GNP 
Sbjct: 571 QGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGNPF 630

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R  R  ++   T +++ YLR R+P
Sbjct: 631 RQPRHQILMKGTESIMSYLRDRVP 654



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +T LDLS N++  + P++ +  SL  LIL  N + D P A +  L  L  L +  
Sbjct: 123 WNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVDLP-AEIGKLEKLMRLNVSR 181

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P + +  +P L+ L++SYN                        +  E   DI  
Sbjct: 182 NKLCDLPRELYS-LPELRHLNISYN------------------------EFSELNPDISD 216

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   NS++S+P G   L  LT L L  N+I  LPP+LV++
Sbjct: 217 LHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLVNM 263



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 25/287 (8%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LP EIGK+  L +L ++ N L  L
Sbjct: 128 LTNLDLSSNALSHISPKIENLQSLTVLILHDNALVDLPAEIGKLEKLMRLNVSRNKLCDL 187

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAI 372
              L + P    L++L   +  NE SE +    DL  +         E    G N + ++
Sbjct: 188 PRELYSLPE---LRHLN--ISYNEFSELNPDISDLHML---------EFLDAGHNSIKSL 233

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  I     +T L L  N I++LPP+L +  SLQ L L +N +   P+  +  L  L  L
Sbjct: 234 PGGIGFLVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPED-MGLLRKLQFL 292

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF---SSLPHLQELYLRRMQLRE 489
            + +N + ++    F+    L  L  S N  S   N P     +LPHL+ L LR  ++ +
Sbjct: 293 YIQHNDILELTD--FEGNETLTELHASNNYIS---NIPVRMCENLPHLKVLDLRDNKITQ 347

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            P ++  L+ L  LD+S NS+ ++P     L  L  L +  N I ++
Sbjct: 348 LPDELCLLRNLNRLDVSNNSIDTLPVSLAALAHLISLQVEGNPIKSI 394


>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
 gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
          Length = 2303

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 171/623 (27%), Positives = 275/623 (44%), Gaps = 105/623 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
            L   RT   L+LSN++LR +P EV+                 L+ L +A+N I ++ + 
Sbjct: 97  FLSKLRTLVELDLSNQNLRSIPEEVFN-------------IHSLEILRVANNGITEIPKS 143

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L+VS N++S  P  I  L  LK L +S   +  IP+E+ +   L   D S+
Sbjct: 144 ILKLKGLRILDVSGNRISSFP--ISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISN 201

Query: 124 NQLKELPSSLGR------------------------CL---------------------N 138
           N++K LP  LG+                        CL                     N
Sbjct: 202 NKVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQCLEELDLSDMRLKSIPKEAFYLTN 261

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL-- 196
           L   K +NN I ++P D+     +  L ++ NK++ +S  ++     L  L  S N L  
Sbjct: 262 LKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVS-EVLDKMKFLRHLSLSNNNLTD 320

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           +G P     +  L  L+L  N++ +IP+ +     L       N +  LP E+  L  + 
Sbjct: 321 SGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIR 380

Query: 257 TLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L L +N++++      E C++R   LDLS N L+G+ P I +M  +  L L+ N +  +
Sbjct: 381 VLKLKNNRIRQVADDVAELCEIRH--LDLSENRLNGIHPSILEMRHMESLDLSKNRVIKI 438

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL----ITMATRLSVTS--------KE 361
              + +      LK   + L   E +E   T +DL    I    R+ ++         K 
Sbjct: 439 PREISHLRRLQTLKLRGTDL--REVNEELFTIDDLRELDIGQNPRMFISEKVSKLRCLKT 496

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           LSL+G  LS +P E++E   +  LD+S N I+ +P  + +   L+ L  +R  +   P +
Sbjct: 497 LSLDGCRLSGLPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDSVPYS 556

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN------------ 468
           IL  L  L CL L  N ++++ S+    +  LQ+LDLS N I  +P              
Sbjct: 557 IL-GLCKLRCLFLQGNRIQKI-SESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNV 614

Query: 469 --------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
                    P   L +L+ L +    L   P +++ L QL+ L  S N L S+PE F  L
Sbjct: 615 ERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKL 674

Query: 521 TSLTELDLSDNNISALPPELVSV 543
           + L  LDL+ NNI +LP    S+
Sbjct: 675 SRLKVLDLTKNNIESLPDSFSSL 697



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 247/524 (47%), Gaps = 55/524 (10%)

Query: 46   DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            ++++L  +HNNI  +  D+  LP L  L++ HN+L ++P  IG L  L+ L +S N I  
Sbjct: 975  NMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNKIAY 1034

Query: 106  IPD-EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +   ++  A  LV  D S N L  +PSS+ +  +L   K + N I  +P  ++  + +++
Sbjct: 1035 VTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTE 1094

Query: 165  LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            L + GN++ V+    ++    L ++  S N L+ +P +I  +S L  LD+  NRI  + S
Sbjct: 1095 LQLRGNRIFVVCRE-VSELHNLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYYLSS 1153

Query: 225  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             +     +  F    N +  LP ++ KL +L  + LH N +      A    +  LDLS 
Sbjct: 1154 DVQKMKKIRTFRAVGNKIHQLPEQILKLDRLEHVVLHDNNIN-LLPSAMPPNVVTLDLSC 1212

Query: 285  NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------------LKYL 329
            N +S L   +G+M  L  L L  N + + R        P+L               + +L
Sbjct: 1213 NGISRLGSSLGQMQNLEVLNLADNRVDSCRGVFGPNTFPSLRVLNVRNNAIMALPNIGHL 1272

Query: 330  RSRLPENEDSEASTTKEDLITMATRLSVTSKE-------------------LSLEGMNLS 370
            RS    +  + + +   DL   A+ L V   +                   LSL G  L 
Sbjct: 1273 RSLTSLDATANSISDLVDLCN-ASDLRVLKADNNLITEVPDEIAKLEHIELLSLSGNWLD 1331

Query: 371  AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             +   + E  +I +L  +   + E+PPE+    +L+++ L  N++ D+PD +L  L  L+
Sbjct: 1332 DLSPHLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSIELKDNELADFPDVLLY-LPHLA 1390

Query: 431  CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH---LQELYLRRMQ 486
             + LD N L  +P D  +    L+I+ LS N I +LP     S+L H   LQ L +R+ +
Sbjct: 1391 NVALDGNKLDIIP-DEVRRFESLKIMSLSRNNIETLP-----STLCHVNNLQWLDVRKNK 1444

Query: 487  LREAPTDILRLQQLRILDLSQNSLQSIP-----EGFKNLTSLTE 525
            L   P DI+RL+   IL  S N L S P     +GF  +TS  E
Sbjct: 1445 LTTLPADIVRLEDPTIL-TSGNCLVSPPQEVCDQGFSAITSFFE 1487



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 223/500 (44%), Gaps = 27/500 (5%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+ L +  N +  L  +L  L  L  L  SHN+L+ LP   G+L  LK LD++ N+I  +
Sbjct: 631  LETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLTKNNIESL 690

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            PD   S  AL     +SN +   P+ +     L+D   S+N I SLP  +     +  L+
Sbjct: 691  PDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGVGLLENVEALN 750

Query: 167  VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            +  NKL    ++ I+  T L  L  S+  +  +PETI  L  L  L++  N++  IPS +
Sbjct: 751  LSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNISSNKLQYIPSEM 810

Query: 227  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                 L E    +N L  LP +  + S +  L L  N L E       L  L  LDLS N
Sbjct: 811  FELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNINTLMYLERLDLSRN 870

Query: 286  SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +L  LP  +  +  L  L L+GN LR           P     L   + +  D+      
Sbjct: 871  NLRDLPESLSFLPCLEILNLSGNRLRHF---------PPEFSGLMLEVLDLSDNGLRFVP 921

Query: 346  EDLITMATRLSVTSKELSLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             ++  M          LSL+ +N+S      I   + +   +  LD+SRNS+  +P  + 
Sbjct: 922  REVTDM----------LSLQTLNISRNRIKVIGDRMCQLDSLVDLDISRNSVTSIPENIC 971

Query: 401  SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              A+++ L  S N I      +   L +L  L L +N L +VP+D    +  L++L LS 
Sbjct: 972  LLANMERLTASHNNISSIIRDV-CELPNLEYLDLRHNQLEKVPTD-IGSLSQLRVLLLSG 1029

Query: 461  NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            N  +       +    L  L L R  L   P+ + +   LR+L L++N ++ +P      
Sbjct: 1030 NKIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRA 1089

Query: 521  TSLTELDLSDNNISALPPEL 540
            T LTEL L  N I  +  E+
Sbjct: 1090 TGLTELQLRGNRIFVVCREV 1109



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 234/522 (44%), Gaps = 69/522 (13%)

Query: 45  VDLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            DL    L+H ++   K ED+++L L +      N L+ +P  I  L  LK L++S N I
Sbjct: 39  FDLSDRCLSHLSVGVCKMEDIQSLDLRS------NYLTSIPDDIENLRNLKVLNLSGNRI 92

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           ++    +     LV+ D S+  L+ +P  +    +L   + +NN IT +P+ +     + 
Sbjct: 93  VEY-SFLSKLRTLVELDLSNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLR 151

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LDV GN+++      I++   L EL  S+  L  +PE + +L  L  LD+         
Sbjct: 152 ILDVSGNRISSFP---ISTLGTLKELYISRVQLQTIPEEVFALEELEVLDI--------- 199

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
                          NN +  LP +LGKL +L  L L  N +  + V      L  LDLS
Sbjct: 200 --------------SNNKVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQCLEELDLS 245

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---------------VNGPTPAL--L 326
           +  L  +P E   +T L+ L L  N +RT+ + +               ++  +  L  +
Sbjct: 246 DMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSEVLDKM 305

Query: 327 KYLRSRLPENE---DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           K+LR     N    DS       D+I++        + L+L+G  L+AIP+ +++A ++ 
Sbjct: 306 KFLRHLSLSNNNLTDSGFPVDDVDIISL--------EHLNLDGNKLTAIPTCVYQAQKLV 357

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV- 442
            L    N I+ LP E++    ++ L L  N+I+   D +   L  +  L L  N L  + 
Sbjct: 358 CLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDV-AELCEIRHLDLSENRLNGIH 416

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           PS    ++  ++ LDLS N +  +P     S L  LQ L LR   LRE   ++  +  LR
Sbjct: 417 PS--ILEMRHMESLDLSKNRVIKIPRE--ISHLRRLQTLKLRGTDLREVNEELFTIDDLR 472

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            LD+ QN    I E    L  L  L L    +S LP EL  +
Sbjct: 473 ELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSGLPRELFEL 514



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 248/543 (45%), Gaps = 66/543 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D++ L L +N I ++ +D+  L  +  L++S N+L+ +  +I E+  ++SLD+S N ++K
Sbjct: 378 DIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLDLSKNRVIK 437

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN-------------C---- 148
           IP EI     L         L+E+   L    +L +     N             C    
Sbjct: 438 IPREISHLRRLQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMFISEKVSKLRCLKTL 497

Query: 149 ------ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
                 ++ LP +L +   +  LD+  N +  +    I +   L  L A++  L+ +P +
Sbjct: 498 SLDGCRLSGLPRELFELPNLEVLDISDNDIRTIP-TAIENLKKLKVLRANRLFLDSVPYS 556

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L +L  L L  NRI  I  SIS    L    + +N +  +PA+LG++S L ++++  
Sbjct: 557 ILGLCKLRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVER 616

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N + +     C+L+ L  L++ +N L  LP  + +++ L+ L  + N L +L        
Sbjct: 617 NWVTDL-TPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLS 675

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
              +L   ++ +    DS +S            LSV    L L   ++S+ P+E+     
Sbjct: 676 RLKVLDLTKNNIESLPDSFSSLNA---------LSV----LRLASNDMSSFPTEVCGINT 722

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL------- 434
           +T +DLS N I  LP  +    +++ L LS+NK+ D     ++ ++SL  L L       
Sbjct: 723 LTDIDLSSNKIPSLPFGVGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTK 782

Query: 435 ----------------DNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHL 477
                            +N L+ +PS+ F ++P L+ LD S N+   LP +    S   +
Sbjct: 783 VPETISRLEELEYLNISSNKLQYIPSEMF-ELPFLEELDASDNVLKELPVDAVQES--DV 839

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + L L    L E   +I  L  L  LDLS+N+L+ +PE    L  L  L+LS N +   P
Sbjct: 840 ERLLLGGNHLDELSRNINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFP 899

Query: 538 PEL 540
           PE 
Sbjct: 900 PEF 902



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 242/534 (45%), Gaps = 41/534 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +P  VY             +A  L  L    N I  L E++  L  + VL
Sbjct: 336 LNLDGNKLTAIPTCVY-------------QAQKLVCLSAEGNRIRVLPEEIAGLKDIRVL 382

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N++ ++   + EL  ++ LD+S N +  I   I     +   D S N++ ++P  +
Sbjct: 383 KLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLDLSKNRVIKIPREI 442

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
                L   K     +  + E+L     + +LD+  N    +S   ++    L  L    
Sbjct: 443 SHLRRLQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMFISEK-VSKLRCLKTLSLDG 501

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+G+P  +  L  L  LD+  N I +IP++I     L         L ++P  +  L 
Sbjct: 502 CRLSGLPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDSVPYSILGLC 561

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L  N++++       L+ L VLDLS+N +  +P ++G+++TL+ + +  N +  
Sbjct: 562 KLRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVERNWVTD 621

Query: 313 LRSSLVNGPTP-ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNL 369
           L        TP   LKYL +          +     L ++   L   S  K L      L
Sbjct: 622 L--------TPICRLKYLET---------LNIGSNGLYSLPGNLVELSQLKHLRASHNRL 664

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           +++P +  +   +  LDL++N+I+ LP   SS  +L  L L+ N +  +P  +   +++L
Sbjct: 665 TSLPEQFGKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEV-CGINTL 723

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQL 487
           + + L +N +  +P  G   +  ++ L+LS N   LP++     S +  L+ L L +  +
Sbjct: 724 TDIDLSSNKIPSLPF-GVGLLENVEALNLSKN--KLPDDMHDFISQMTSLKHLDLSQTGM 780

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            + P  I RL++L  L++S N LQ IP     L  L ELD SDN +  LP + V
Sbjct: 781 TKVPETISRLEELEYLNISSNKLQYIPSEMFELPFLEELDASDNVLKELPVDAV 834



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 234/552 (42%), Gaps = 58/552 (10%)

Query: 14   LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            LNLS   LR  P E              +  + L+ L L+ N +  +  ++ ++  L  L
Sbjct: 888  LNLSGNRLRHFPPE--------------FSGLMLEVLDLSDNGLRFVPREVTDMLSLQTL 933

Query: 74   NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            N+S N++  +   + +L  L  LD+S NS+  IP+ I     + +   S N +  +   +
Sbjct: 934  NISRNRIKVIGDRMCQLDSLVDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDV 993

Query: 134  GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
                NL      +N +  +P D+   S++  L + GNK+  ++   +A    L  L  S+
Sbjct: 994  CELPNLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSR 1053

Query: 194  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            NLL  +P ++   + L  L L++N+I  +P+ IS    L E  +  N +  +  E+ +L 
Sbjct: 1054 NLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCREVSELH 1113

Query: 254  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
             L  +DL  N L    +  C +  L  LD+S+N +  L  ++ KM  +R     GN +  
Sbjct: 1114 NLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYYLSSDVQKMKKIRTFRAVGNKIHQ 1173

Query: 313  LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
            L   ++             +L   E         +L+  A   +V + +LS  G  +S +
Sbjct: 1174 LPEQIL-------------KLDRLEHVVLHDNNINLLPSAMPPNVVTLDLSCNG--ISRL 1218

Query: 373  PSEIWEAGEITKLDLSRNSIQE---------LP---------------PELSSCASLQTL 408
             S + +   +  L+L+ N +            P               P +    SL +L
Sbjct: 1219 GSSLGQMQNLEVLNLADNRVDSCRGVFGPNTFPSLRVLNVRNNAIMALPNIGHLRSLTSL 1278

Query: 409  ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
              + N I D  D  L + S L  LK DNN + +VP D    +  +++L LS N      +
Sbjct: 1279 DATANSISDLVD--LCNASDLRVLKADNNLITEVP-DEIAKLEHIELLSLSGNWLD-DLS 1334

Query: 469  PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
            P  S L  ++ L      L E P ++  L+ LR ++L  N L   P+    L  L  + L
Sbjct: 1335 PHLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSIELKDNELADFPDVLLYLPHLANVAL 1394

Query: 529  SDNNISALPPEL 540
              N +  +P E+
Sbjct: 1395 DGNKLDIIPDEV 1406



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 22/178 (12%)

Query: 3    RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
            R+LKA          N  + +VP+E+ K            E ++L  L L+ N ++ L  
Sbjct: 1298 RVLKA---------DNNLITEVPDEIAK-----------LEHIEL--LSLSGNWLDDLSP 1335

Query: 63   DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
             L  L  +  L  +   L+E+P  +GEL  L+S+++  N +   PD +     L      
Sbjct: 1336 HLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSIELKDNELADFPDVLLYLPHLANVALD 1395

Query: 123  SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             N+L  +P  + R  +L     S N I +LP  L   + +  LDV  NKLT L  +++
Sbjct: 1396 GNKLDIIPDEVRRFESLKIMSLSRNNIETLPSTLCHVNNLQWLDVRKNKLTTLPADIV 1453


>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
          Length = 630

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 218/447 (48%), Gaps = 56/447 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ VYK                L  L L  N I  + +++R L  LT+L
Sbjct: 223 LDLRHNKLHDIPDVVYK-------------LHSLTTLFLRFNRIRVVGDEIRQLTHLTML 269

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG L  L + DVS N +  +P+EIG+   L   D   N+L ++P S+
Sbjct: 270 SLRENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESI 329

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL+      N +TS+P  L++C  M + +VEGN ++ L + L++S + LT +  S+
Sbjct: 330 GQLRNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSR 389

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  S+ I    ++L  N++  IP  I S    LA+  M  N L++LP ++
Sbjct: 390 NSFTAYPS--GGPSQFINVHSINLEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDI 447

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   +   L+ L VL LSNN+L  +P  IG +  LR L L  N
Sbjct: 448 GTWVNMVELNLGTNQLNKVPDDIALLQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEEN 507

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL         P  + +LR                DL           K+L ++   
Sbjct: 508 KLETL---------PNEIGFLR----------------DL-----------KKLIVQSNQ 531

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P  +     +T L +  N++  +P E+ +  +L++L L+ N         L   SS
Sbjct: 532 LTSLPRAVGHLSNLTYLSVGENNLSYIPEEIGTLETLESLYLNDNLNLHNLPFELALCSS 591

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           L  + ++N PL Q+P++     P L I
Sbjct: 592 LQIMSIENCPLSQIPAEIVGGGPSLVI 618



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 193/428 (45%), Gaps = 88/428 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L VL++ HNKL ++P  + +LH L +L + FN I 
Sbjct: 195 VNLSTLALSENSLTGLPDSLANLRCLRVLDLRHNKLHDIPDVVYKLHSLTTLFLRFNRIR 254

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + DEI   T L       N+++ELP+ +GR  NL  F  S+N +  LPE++ +C ++S 
Sbjct: 255 VVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSS 314

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PE+IG L  L RL L  NR+ S+P 
Sbjct: 315 LDLQHNELL------------------------DIPESIGQLRNLNRLGLRYNRLTSVPR 350

Query: 225 SISGCCSLAEFYMGNNALSALP-------------------------AELGKLSKLGTLD 259
           S+S C  + EF +  NA+S LP                             +   + +++
Sbjct: 351 SLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSIN 410

Query: 260 LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L  NQ+ +  Y + +    L+ L++  N L+ LP +IG    + +L L  N L       
Sbjct: 411 LEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQL------- 463

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                        +++P            D I +   L V    L L   NL  +P+ I 
Sbjct: 464 -------------NKVP------------DDIALLQSLEV----LILSNNNLKRVPNSIG 494

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++  LDL  N ++ LP E+     L+ LI+  N++   P A+   LS+L+ L +  N
Sbjct: 495 NLRKLRVLDLEENKLETLPNEIGFLRDLKKLIVQSNQLTSLPRAV-GHLSNLTYLSVGEN 553

Query: 438 PLRQVPSD 445
            L  +P +
Sbjct: 554 NLSYIPEE 561



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 208/448 (46%), Gaps = 42/448 (9%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +S+  +P  +   T L +F    N+L  LP  +G  +NLS    S N +T LP+ 
Sbjct: 154 LDLSKSSVTLLPPSVRELTHLTEFYLYGNKLACLPPEIGCLVNLSTLALSENSLTGLPDS 213

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA+   +  LD+  NKL  +  +++     LT L    N +  + + I  L+ L  L L 
Sbjct: 214 LANLRCLRVLDLRHNKLHDIP-DVVYKLHSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLR 272

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I    +L  F + +N L  LP E+G   +L +LDL  N+L +      QL
Sbjct: 273 ENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESIGQL 332

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           R L+ L L  N L+ +P  +     + +  + GN +    S L +G   +L +       
Sbjct: 333 RNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAI----SHLPDGLLSSLSQLTSITFS 388

Query: 335 ENE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSI 392
            N   +  S      I + +        ++LE   +  IP  I+  A  + KL++  N +
Sbjct: 389 RNSFTAYPSGGPSQFINVHS--------INLEHNQVDKIPYGIFSRAKHLAKLNMKENLL 440

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             LP ++ +  ++  L L  N++   PD I   L SL  L L NN L++VP +   ++  
Sbjct: 441 TSLPLDIGTWVNMVELNLGTNQLNKVPDDI-ALLQSLEVLILSNNNLKRVP-NSIGNLRK 498

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           L++LDL  N                        +L   P +I  L+ L+ L +  N L S
Sbjct: 499 LRVLDLEEN------------------------KLETLPNEIGFLRDLKKLIVQSNQLTS 534

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPEL 540
           +P    +L++LT L + +NN+S +P E+
Sbjct: 535 LPRAVGHLSNLTYLSVGENNLSYIPEEI 562


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 187/394 (47%), Gaps = 44/394 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 43  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 161

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 162 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 221

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 282 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNLQ 309

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V    L L    L+ +P EI +   + KL LSRN +  LP E+     L++L L  N++ 
Sbjct: 310 V----LDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 365

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
             P+ I   L +L  L L NN L   PS+  + I
Sbjct: 366 TLPEEI-KQLKNLKKLYLHNNSL---PSEKIERI 395



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 50/412 (12%)

Query: 139 LSDFKASNN------CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L+ F A  N        T+L E L + +++  LD+  +KL +L    I     L  L + 
Sbjct: 24  LTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKE-IGQLQNLQILNSE 82

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ ++P  I    +L   ++ NN L+ LP E+GKL
Sbjct: 83  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 142

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  N+L     E  +L+ L  L LS N L+ LP EIG++ +LRKL L G    
Sbjct: 143 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGK--- 199

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                  N P   L K                     IT    L    +EL L+   L+ 
Sbjct: 200 -------NKPFTILPKE--------------------ITQLQNL----QELHLKFNRLTV 228

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  LDL +N +  LP E+    +L  L LS N++   P  I T L +L  
Sbjct: 229 LPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEI-TQLQNLQE 287

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L+ N     P +       LQ+LDL  N + +LPE      L +LQ+L+L R QL   
Sbjct: 288 LNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPEE--IGQLQNLQKLHLSRNQLTTL 344

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           P +I RLQ+L  L L  N L ++PE  K L +L +L L +N   +LP E + 
Sbjct: 345 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN---SLPSEKIE 393



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 56  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 162

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 221

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 341

Query: 311 RTL 313
            TL
Sbjct: 342 TTL 344



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 149/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 79  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 125

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 126 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 185

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 186 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 244

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 245 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 304

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL------------------------RLSVLDLSNNSL 287
              L  LDL+ N+L     E  QL                        +L  L L +N L
Sbjct: 305 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 364

Query: 288 SGLPPEIGKMTTLRKLLLTGNPL 310
           + LP EI ++  L+KL L  N L
Sbjct: 365 ATLPEEIKQLKNLKKLYLHNNSL 387



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 3/231 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVS-HNK-LSELPAAIGELHMLKSLDVSFNSI 103
           +LQ+L L+ N +  L E++  L  L  L++   NK  + LP  I +L  L+ L + FN +
Sbjct: 167 NLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 226

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P EIG    L   D   N+L  LP  +G+  NL     S N +T LP+++     + 
Sbjct: 227 TVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQ 286

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L++E N+        I  +  L  L   +N L  +PE IG L  L +L L +N++ ++P
Sbjct: 287 ELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLP 345

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             I     L    + +N L+ LP E+ +L  L  L LH+N L    +E  +
Sbjct: 346 KEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSLPSEKIERIR 396



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 141/324 (43%), Gaps = 71/324 (21%)

Query: 229 CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 21  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 80

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             NN L+ LP EIGK+  L++L L  N L TL                    PE      
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE----- 115

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 116 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 164

Query: 402 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 165 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 209

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 210 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L  LDLS N ++ LP E+  +
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQL 282


>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 509

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 242/540 (44%), Gaps = 82/540 (15%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L A ++   L+ S + L+++P E+ +             +  +++L +  N ++ L + L
Sbjct: 12  LLAQKSLKKLDASRKGLQELPREIGR-------------SKGMKQLNIEDNRLKDLPDSL 58

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  L  L++S N+LS LP  + +L  L  LD+S N + ++ +E+ +   L++ D  +N
Sbjct: 59  ANLGQLEWLDISDNRLSPLPKVLFQLRKLNWLDLSNNGLSELGEELAAWEELMRLDLKNN 118

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL+ELP++ G+   L       N +++LP       ++ +LD+  N  T L         
Sbjct: 119 QLQELPNNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQL--------- 169

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          PE IG L  L +L +  N +  +   +    +L E       L  
Sbjct: 170 ---------------PEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQAEGLGLEE 214

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +P E+G+L+ L +L L  N+LK       +C   L  LDL NN L  LP  + +   L+ 
Sbjct: 215 VPEEIGQLNNLQSLFLGYNRLKSLAANLGSCS-ALEQLDLGNNRLEKLPLNLARCQQLKV 273

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  NPL         G  P  L+ +++        E   +  +L+ +   LS      
Sbjct: 274 LNLEDNPL---------GELPLFLQEIQAL------EELDMSNCNLVNLGAGLS------ 312

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
                    +P+  W       LDLS N +++LP       +L  L L  N+++ WP A 
Sbjct: 313 ---------LPALHW-------LDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKA- 355

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELY 481
           L  LS +  L L  N LRQ+      D P L+ LDLS N   L E +  +  LP L++L 
Sbjct: 356 LEELSQIRQLLLAGNFLRQINLSEL-DWPELEELDLSKN--ELTELSGQWDKLPQLRQLN 412

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L + QL + P D   L  L  LDLS N L S+P+    L  +  LDL +N  +  P  L+
Sbjct: 413 LEKNQLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQALL 472



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 29/436 (6%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++L   R    L+LSN  L ++  E+             WE  +L +L L +N +++L  
Sbjct: 79  KVLFQLRKLNWLDLSNNGLSELGEELAA-----------WE--ELMRLDLKNNQLQELPN 125

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +   L  L  L +  N+LS LPA+ G+L  L+ LD+S N+  ++P+EIG   AL +   S
Sbjct: 126 NFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSIS 185

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N + +L   LG+  NL + +A    +  +PE++   + +  L +  N+L  L+ NL  S
Sbjct: 186 ANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANL-GS 244

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L +L    N L  +P  +    +L  L+L  N +  +P  +    +L E  M N  L
Sbjct: 245 CSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQALEELDMSNCNL 304

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
             L A L  L  L  LDL +NQL++      QL  LS LDL +N L   P  + +++ +R
Sbjct: 305 VNLGAGLS-LPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKALEELSQIR 363

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +LLL GN LR +  S ++ P    L      L +NE +E S   + L  +        ++
Sbjct: 364 QLLLAGNFLRQINLSELDWPELEELD-----LSKNELTELSGQWDKLPQL--------RQ 410

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+LE   L+ +P +      + +LDLS N +  LP  L     +Q L L  N+  ++P A
Sbjct: 411 LNLEKNQLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQA 470

Query: 422 ILTSLSSLSCLKLDNN 437
           +L  +  L  L L  N
Sbjct: 471 LLPLVGQLQALYLSEN 486


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 39/369 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L +L L+ N ++ L +++  L  +  L++S+N+L+ LP  IG+L  L+ LD++ N 
Sbjct: 61  ELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNL 120

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P +IG    L +   ++NQLK LP  +G+  NL +    NN + +LP+D+     +
Sbjct: 121 LTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L+++GN+L  L  + I     LTEL  + N L  +P+ IG+L  L  L L  N + ++
Sbjct: 181 RELNLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTL 239

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+     +  QL+ L VL 
Sbjct: 240 PKEIGKLKNLQVLYLG-ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLY 298

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS N L+ LP EIG++  LR+L L+GN + TL         P  +  L+S          
Sbjct: 299 LSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKDIGELQSL--------- 340

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             +EL+L G  ++ +P EI +   + +L+L  N I  +P E+  
Sbjct: 341 ------------------RELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 402 CASLQTLIL 410
             +LQ L L
Sbjct: 383 LKNLQVLYL 391



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 198/392 (50%), Gaps = 23/392 (5%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           Q++   HN    L E L+N   + +L++ +N+   LP  IGEL  L  L +S N +  +P
Sbjct: 26  QEIGTYHN----LTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLP 79

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
            EIG    + +   S+NQL  LP  +G+   L +   +NN +T+LP+D+     + +L +
Sbjct: 80  KEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYL 139

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+L  L  + I     L EL    N L  +P+ IG L  L  L+L  N++ ++P  I 
Sbjct: 140 TNNQLKTLPKD-IGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIG 198

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
              +L E  + NN L+ LP ++G L  LG L L +N+L     E  +L+ L VL L    
Sbjct: 199 KLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-L 257

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L+ LP +IG + +LR+L L+GN + TL   +       +L YL      +E+  A+  KE
Sbjct: 258 LTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVL-YL------SENQLATLPKE 310

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I     L    +EL L G  ++ +P +I E   + +L+LS N I  LP E+    SL+
Sbjct: 311 --IGQLQNL----RELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLR 364

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
            L L  N+I   P  I   L +L  L LD+ P
Sbjct: 365 ELNLGGNQITTIPKEI-GHLKNLQVLYLDDIP 395



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 181/332 (54%), Gaps = 24/332 (7%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L  LDL+NN L+ LP +IG++  LR+L LT N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDI------GQLQNLR 158

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
               +N  ++  T  +D+  +        +EL+L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ELYLDN--NQLKTLPKDIGQLQNL-----RELNLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 449
            +  LP ++ +  +L  L+L  N++   P  I   L +L  L L    L  +P+D G+  
Sbjct: 212 PLTTLPKDIGNLKNLGELLLINNELTTLPKEI-GKLKNLQVLYL-GALLTTLPNDIGY-- 267

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LDLS N
Sbjct: 268 LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 325

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            + ++P+    L SL EL+LS N I+ LP E+
Sbjct: 326 QITTLPKDIGELQSLRELNLSGNQITTLPKEI 357



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 197/461 (42%), Gaps = 97/461 (21%)

Query: 80  LSELPAA-IGELHMLKS-----LDVSFNSIMK---IPDEIGSATALVKFDCSSNQLKELP 130
           LS+L A  IG  H L        DV   S+     +P EIG    L +   SSNQLK LP
Sbjct: 20  LSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLP 79

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+   +     SNN +T+LP+D+    K                        L EL 
Sbjct: 80  KEIGKLQKIERLSLSNNQLTTLPKDIGKLKK------------------------LRELD 115

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + NLL  +P+ IG L  L  L L  N++ ++P  I    +L E Y+ NN L  LP ++G
Sbjct: 116 LTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIG 175

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L+L  NQLK    +  +L+ L+ L+L+NN L+ LP +IG +  L +LLL  N 
Sbjct: 176 QLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNE 235

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L TL   +       +L YL                                    G  L
Sbjct: 236 LTTLPKEIGKLKNLQVL-YL------------------------------------GALL 258

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P++I     + +L+LS N I  LP ++    +LQ L LS N++   P  I   L +L
Sbjct: 259 TTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEI-GQLQNL 317

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L  N +  +P D                            L  L+EL L   Q+  
Sbjct: 318 RELDLSGNQITTLPKD-------------------------IGELQSLRELNLSGNQITT 352

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
            P +I +LQ LR L+L  N + +IP+   +L +L  L L D
Sbjct: 353 LPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 393



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 36/270 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L+N  L+ +P ++              +  +L++L L +N ++ L +D+  L  L  
Sbjct: 136 ELYLTNNQLKTLPKDI-------------GQLQNLRELYLDNNQLKTLPKDIGQLQNLRE 182

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L  LP  IG+L  L  L+++ N +  +P +IG+   L +    +N+L  LP  
Sbjct: 183 LNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE 242

Query: 133 LGRCLNLS----------------------DFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL                       +   S N IT+LP+D+     +  L +  N
Sbjct: 243 IGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSEN 302

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  L    I     L EL  S N +  +P+ IG L  L  L+L  N+I ++P  I    
Sbjct: 303 QLATLPKE-IGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQ 361

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           SL E  +G N ++ +P E+G L  L  L L
Sbjct: 362 SLRELNLGGNQITTIPKEIGHLKNLQVLYL 391


>gi|294956203|ref|XP_002788852.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
 gi|239904464|gb|EER20648.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
          Length = 582

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 170/565 (30%), Positives = 269/565 (47%), Gaps = 46/565 (8%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           ++  LK A  SGSLNL++  L  VP ++ K      +G  WW+   ++K+ ++ N I ++
Sbjct: 19  IEAALKRAFASGSLNLASAGLTTVPQQLEKLDTFTLDGVSWWQCNSIEKVDISGNEIREI 78

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
              L  ++P     N S N++  LP A+  L  LKSL +  N +   P    S ++LV+ 
Sbjct: 79  PTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTIFPTS-ESPSSLVEV 137

Query: 120 DCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
             S N L ELP      L N+      +N + +L E L   +++  L    N+L  +   
Sbjct: 138 RLSHNSLCELPRGFADVLPNVQALSIDHNHLVNLDEPLP--TQLRVLLASSNELVSI-RG 194

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           +      L EL  SKN L  +P+ +   S+L  +DL  N+++  P       +LA  Y  
Sbjct: 195 VGDGLDFLEELDLSKNSLTAIPD-LRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSY-- 251

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N+L + P        L TL L +N++K        L +L  LD+SNN +S +P E+G++
Sbjct: 252 -NSLESPPEAALLPPALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRL 310

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L K+ L GNP+R +  +++   +  LLK LR RL  +E S     +E L+T     + 
Sbjct: 311 PSLTKVALDGNPIRNVPMAVLRQGSAGLLKLLRERLGPDEVS-VDDVQEALMTEVRNATH 369

Query: 358 TSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
             K L L    L   IP E+ +A  +  LDLSRN + E+   L S  +L  L++S N +K
Sbjct: 370 GGKRLDLSNRRLGPGIPEEVLQAEGLLVLDLSRNMVAEI-EVLKSLDTLLRLVMSHNVLK 428

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPEN------ 468
              DA+  +  +L  L + NN L ++P  G   +P L   D S N  + SLP++      
Sbjct: 429 TI-DAL--NYPALQELDISNNKLTKLP--GEISLPQLVQFDASCNRELISLPKSLLMGCA 483

Query: 469 -----------------PPFSSLPHLQELYLRRMQLREAPTDIL--RLQQLRILDLSQNS 509
                             P    PHL+ L L   +  + PTD++  RL  L+ L L+ N+
Sbjct: 484 KLRELRAGNCCLHSWDFLPNPEHPHLEVLDLSNNRFTDIPTDLVPTRLPGLQTLLLANNA 543

Query: 510 LQSIPEGFKNLTSLTELDLSDNNIS 534
           + ++P      T+L  L L  N IS
Sbjct: 544 IATLPPSLGRATALRSLTLEGNPIS 568



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 181/448 (40%), Gaps = 84/448 (18%)

Query: 118 KFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           K D S N+++E+P+ L   + +   F AS+N I SLP  L   +K+  L +  NKLT+  
Sbjct: 67  KVDISGNEIREIPTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTIFP 126

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            +   S + L E+  S N L  +P      L  +  L +  N ++++   +     L   
Sbjct: 127 TS--ESPSSLVEVRLSHNSLCELPRGFADVLPNVQALSIDHNHLVNLDEPLP--TQLRVL 182

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIG 295
              +N L ++      L  L  LDL  N L       C  +L  +DLS+N L   P    
Sbjct: 183 LASSNELVSIRGVGDGLDFLEELDLSKNSLTAIPDLRCCSQLGNIDLSHNKLVHWP---- 238

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
                      G  + TL  S  +  +P                EA+     L+T     
Sbjct: 239 ---------RLGEKVHTLAFSYNSLESPP---------------EAALLPPALVT----- 269

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                 L L+   +  +P  ++   ++  LD+S N I  +P EL    SL  + L  N I
Sbjct: 270 ------LLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRLPSLTKVALDGNPI 323

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLR--QVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           ++ P A+L    S   LKL    L   +V  D  ++  M ++ + ++    L        
Sbjct: 324 RNVPMAVLRQ-GSAGLLKLLRERLGPDEVSVDDVQEALMTEVRNATHGGKRL-------- 374

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK--------------- 518
                +L  RR+     P ++L+ + L +LDLS+N +  I E  K               
Sbjct: 375 -----DLSNRRLG-PGIPEEVLQAEGLLVLDLSRNMVAEI-EVLKSLDTLLRLVMSHNVL 427

Query: 519 ------NLTSLTELDLSDNNISALPPEL 540
                 N  +L ELD+S+N ++ LP E+
Sbjct: 428 KTIDALNYPALQELDISNNKLTKLPGEI 455



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 68/273 (24%)

Query: 1   MDRILKAARTSGSLNLSNRSLR-DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           M  +  A      L+LSNR L   +P EV +      EG        L  L L+ N + +
Sbjct: 361 MTEVRNATHGGKRLDLSNRRLGPGIPEEVLQ-----AEG--------LLVLDLSRNMVAE 407

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           + E L++L  L  L +SHN L  + A       L+ LD+S N + K+P EI S   LV+F
Sbjct: 408 I-EVLKSLDTLLRLVMSHNVLKTIDAL--NYPALQELDISNNKLTKLPGEI-SLPQLVQF 463

Query: 120 DCSSN-QLKELPSSL-GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           D S N +L  LP SL   C  L + +A N C+                            
Sbjct: 464 DASCNRELISLPKSLLMGCAKLRELRAGNCCL---------------------------- 495

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI--SGCCSLAEF 235
               SW  L             PE       L  LDL  NR   IP+ +  +    L   
Sbjct: 496 ---HSWDFLPN-----------PEH----PHLEVLDLSNNRFTDIPTDLVPTRLPGLQTL 537

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
            + NNA++ LP  LG+ + L +L L  N +  Y
Sbjct: 538 LLANNAIATLPPSLGRATALRSLTLEGNPISCY 570



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 113/296 (38%), Gaps = 105/296 (35%)

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSI 392
           E  I  A + +  S  L+L    L+ +P ++             W+   I K+D+S N I
Sbjct: 16  EATIEAALKRAFASGSLNLASAGLTTVPQQLEKLDTFTLDGVSWWQCNSIEKVDISGNEI 75

Query: 393 QELP-------PELSSC-----------------ASLQTLILSRNKIKDWPDAILTSLSS 428
           +E+P       P+  S                  A L++L+L RNK+  +P +   S SS
Sbjct: 76  REIPTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTIFPTS--ESPSS 133

Query: 429 LSCLKLDNNPLRQVPSDGFKDI-PMLQILDLSYN-IASLPENPPFS-------------- 472
           L  ++L +N L ++P  GF D+ P +Q L + +N + +L E  P                
Sbjct: 134 LVEVRLSHNSLCELPR-GFADVLPNVQALSIDHNHLVNLDEPLPTQLRVLLASSNELVSI 192

Query: 473 -----SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL----------------- 510
                 L  L+EL L +  L   P D+    QL  +DLS N L                 
Sbjct: 193 RGVGDGLDFLEELDLSKNSLTAIP-DLRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSY 251

Query: 511 --------------------------QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                                     + +P G   L  L  LD+S+N+IS +P EL
Sbjct: 252 NSLESPPEAALLPPALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSEL 307


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 211/450 (46%), Gaps = 62/450 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ +YK                L  L L  N I  + ++L+NL  LT+L
Sbjct: 188 LDLRHNKLSDIPDVIYK-------------LHTLTTLYLRFNRIRVVGDNLKNLSSLTML 234

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPAAIG L  L +LD+S N +  +P+ IG+   L   D   N L ++P S+
Sbjct: 235 SLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESI 294

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 295 GNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 354

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N  +  P       + +  ++L  N+I  I   I S    L +  M  NAL++LP ++G 
Sbjct: 355 NAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 414

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +++  L+  +N L +   +  C   L +L LSNN L  +P  IG +  LR L L  N L
Sbjct: 415 WTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRL 474

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L S +       LL  L                              ++L L+   LS
Sbjct: 475 ESLPSEI------GLLHDL------------------------------QKLILQSNQLS 498

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-----LTS 425
           A+P  I     +T L +  N++Q LP E+ +  +L++L      I D P  I     L  
Sbjct: 499 ALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLY-----INDNPSLIKLPYELAL 553

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             +L+ + ++N PL  +P +     P L I
Sbjct: 554 CQNLAIMSIENCPLSALPPEVVSGGPSLVI 583



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 213/462 (46%), Gaps = 83/462 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLS++P  I +LH L +L + FN I  
Sbjct: 161 NLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSDIPDVIYKLHTLTTLYLRFNRIRV 220

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + ++L       N++ ELP+++G  +NL+    S+N +  LPE + +C  ++ L
Sbjct: 221 VGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTAL 280

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PE+IG+LS L+RL L  N++ SIP S
Sbjct: 281 DLQHNDLL------------------------DIPESIGNLSNLMRLGLRYNQLTSIPVS 316

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y               +
Sbjct: 317 LKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINL 376

Query: 271 EACQLR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---S 315
           E  Q+             L+ L++  N+L+ LP +IG  T + +L    N L  L     
Sbjct: 377 EHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 436

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            L N     L   L  R+P            + I    +L V    L LE   L ++PSE
Sbjct: 437 CLQNLEILILSNNLLKRIP------------NTIGNLKKLRV----LDLEENRLESLPSE 480

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I    ++ KL L  N +  LP  +    +L  L +  N ++  P+ I T L +L  L ++
Sbjct: 481 IGLLHDLQKLILQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGT-LENLESLYIN 539

Query: 436 NNP-LRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLP 475
           +NP L ++P +          L L  N+A +  EN P S+LP
Sbjct: 540 DNPSLIKLPYE----------LALCQNLAIMSIENCPLSALP 571



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 219/492 (44%), Gaps = 73/492 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 116 IQRLDLSKSSITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSL 175

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL+                         +P+ I  L  L  L
Sbjct: 176 PDSLQNLKQLKVLDLRHNKLS------------------------DIPDVIYKLHTLTTL 211

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L  NRI  +  ++    SL    +  N +  LPA +G L  L TLDL  N LK     +
Sbjct: 212 YLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAI 271

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             C + L+ LDL +N L  +P  IG ++ L +L L  N L ++  SL N           
Sbjct: 272 GNC-VNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEG 330

Query: 331 SRLPENEDSE-ASTTKEDLITM-------------ATRLSVTSKELSLEGMNLSAIPSEI 376
           + + +  D   AS +    IT+             A   +VTS  ++LE   +  I   I
Sbjct: 331 NGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTS--INLEHNQIDKIQYGI 388

Query: 377 W-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           +  A  +TKL++  N++  LP ++ +   +  L    N +   PD I   L +L  L L 
Sbjct: 389 FSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI-HCLQNLEILILS 447

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           NN L+++P +   ++  L++LDL  N + SLP       L  LQ+L L+  QL   P  I
Sbjct: 448 NNLLKRIP-NTIGNLKKLRVLDLEENRLESLPSE--IGLLHDLQKLILQSNQLSALPRTI 504

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN---------------------- 532
             L  L  L + +N+LQ +PE    L +L  L ++DN                       
Sbjct: 505 GHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNPSLIKLPYELALCQNLAIMSIEN 564

Query: 533 --ISALPPELVS 542
             +SALPPE+VS
Sbjct: 565 CPLSALPPEVVS 576


>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
 gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
          Length = 682

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 248/521 (47%), Gaps = 31/521 (5%)

Query: 32  FDEAGEGDKW-----WEAVDLQKLILAHNNIEKLKEDL--RNLPLLTVLNVSHNKLS-EL 83
           F ++  GDKW     W+     K          +  D+  +    +T L    N L+ ++
Sbjct: 34  FYKSTNGDKWHDNTGWDITQNPKKNTVDTTWHGVTTDMNQKEKSKITKLYFFGNNLTGKI 93

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P+ IG L  L +L ++ +    IP EI   T L     +SN+L+  P  L    NL+   
Sbjct: 94  PSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEHFPPQLLTLKNLTSLS 153

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             NN     P  + +   + KLD++ N +  +  + IA+   L EL  S   L   P  I
Sbjct: 154 LRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHES-IANLIELEELDISGMELTEFPLEI 212

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS--ALPAELGKLSKLGTLDLH 261
             L++L  L++ QN++ +IP  I     L E  +G N  S  +L A + KL+KL  L + 
Sbjct: 213 VGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDA-ISKLTKLSFLSVV 271

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           S++LK+   +   L +L  L  S N L   P +I K+ +L++L+L  N + T+ + + N 
Sbjct: 272 SSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNEIGN- 330

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               L K  R  L EN+ SE  +   +L  +        + L L     ++ P +I    
Sbjct: 331 ----LKKLTRLYLEENKISELPSQISELQNL--------ERLRLSDNKFTSFPMQITNLE 378

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            + +L LS+N I +LP ++S+   L+ L L+ NK ++ P  IL  L+ L  L++++N L 
Sbjct: 379 NLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEIL-ELNELKVLQINHNKLE 437

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +    +  L+ LDL YN + S P         +L  L L + +L+  P  I +L++
Sbjct: 438 SLP-NTISILDKLEELDLGYNRLTSFP--LVILKFENLGRLSLEKSELKTLPKGITKLKK 494

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +R+L+L  N  +  P        ++ L L DN IS++P E+
Sbjct: 495 IRMLNLDSNRFEVFPIEILEFQKISYLSLDDNKISSIPNEI 535



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 216/492 (43%), Gaps = 63/492 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L LA N +E     L  L  LT L++ +NK    P  +  +  LK LD+  N I K
Sbjct: 125 NLKYLHLASNKLEHFPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKK 184

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I + I +   L + D S  +L E P  +     L     S N + ++P+D+   +++ +L
Sbjct: 185 IHESIANLIELEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEEL 244

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N  +  S + I+  T L+ L    + L  +   + +L +L  L    N ++  P+ 
Sbjct: 245 DIGFNDYSNGSLDAISKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQ 304

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS   SL E  + +N ++ +P E+G L KL  L L  N++ E   +  +L+ L  L LS+
Sbjct: 305 ISKLDSLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSD 364

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N  +  P +I  +  L++L L+ N +  L S + N      LK L               
Sbjct: 365 NKFTSFPMQITNLENLKELKLSKNKINKLPSQISN------LKKL--------------- 403

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          ++L L       +P+EI E  E+  L ++ N ++ LP  +S    
Sbjct: 404 ---------------EDLYLNHNKFEELPTEILELNELKVLQINHNKLESLPNTISILDK 448

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L L  N++  +P  IL    +L  L L+ + L+ +P  G   +  +++L+L  N   
Sbjct: 449 LEELDLGYNRLTSFPLVIL-KFENLGRLSLEKSELKTLPK-GITKLKKIRMLNLDSN--- 503

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
                              R ++   P +IL  Q++  L L  N + SIP     L  + 
Sbjct: 504 -------------------RFEV--FPIEILEFQKISYLSLDDNKISSIPNEISKLKRMY 542

Query: 525 ELDLSDNNISAL 536
            L LS N +S L
Sbjct: 543 VLSLSRNKLSEL 554



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 163/387 (42%), Gaps = 39/387 (10%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + SK++KL   GN LT    + I +   L  L  + +    +P  I  L+ L  L L  N
Sbjct: 75  EKSKITKLYFFGNNLTGKIPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASN 134

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           ++   P  +    +L    + NN     P  +  +  L  LD+ +N +K+       L  
Sbjct: 135 KLEHFPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIE 194

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LD+S   L+  P EI  +T LR L ++ N L+T+   +       L +     +  N
Sbjct: 195 LEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQDI-----EKLTELEELDIGFN 249

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           + S  S      +T  + LSV S EL      L  +    W       L  S N + E P
Sbjct: 250 DYSNGSLDAISKLTKLSFLSVVSSELKDISFQLENLKKLEW-------LSFSYNELIEFP 302

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            ++S   SL+ L+L  N+I   P+ I  +L  L+ L L+ N + ++PS         QI 
Sbjct: 303 NQISKLDSLKELMLDDNQITTIPNEI-GNLKKLTRLYLEENKISELPS---------QI- 351

Query: 457 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
                          S L +L+ L L   +    P  I  L+ L+ L LS+N +  +P  
Sbjct: 352 ---------------SELQNLERLRLSDNKFTSFPMQITNLENLKELKLSKNKINKLPSQ 396

Query: 517 FKNLTSLTELDLSDNNISALPPELVSV 543
             NL  L +L L+ N    LP E++ +
Sbjct: 397 ISNLKKLEDLYLNHNKFEELPTEILEL 423



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L++L L+ N        + NL  L  L +S NK+++LP+ I  L  L+ L ++ N 
Sbjct: 353 ELQNLERLRLSDNKFTSFPMQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNK 412

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             ++P EI     L     + N+L+ LP+++     L +     N +TS P  +     +
Sbjct: 413 FEELPTEILELNELKVLQINHNKLESLPNTISILDKLEELDLGYNRLTSFPLVILKFENL 472

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L +E ++L  L                        P+ I  L ++  L+L  NR    
Sbjct: 473 GRLSLEKSELKTL------------------------PKGITKLKKIRMLNLDSNRFEVF 508

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P  I     ++   + +N +S++P E+ KL ++  L L  N+L E        RLS + L
Sbjct: 509 PIEILEFQKISYLSLDDNKISSIPNEISKLKRMYVLSLSRNKLSELSFLYKFPRLSSVYL 568

Query: 283 SNNSLS 288
             N +S
Sbjct: 569 DYNRIS 574


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 209/436 (47%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D++ L  LT+L
Sbjct: 174 LDLRHNKLREIPAVVYR-------------LSSLTTLFLRFNRITAVEKDIKTLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS++ +L++E N ++ L   L++S   +  L  ++
Sbjct: 281 GNLCSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  + VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 230/496 (46%), Gaps = 64/496 (12%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L LA  +I  L   +++L  +T L +  NKL  LPA +G L  L  L +S NS+  +PD
Sbjct: 104 RLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L+E+P+ + R  +L+      N IT++ +D+   SK++ L + 
Sbjct: 164 SLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIR 223

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I     L  L  + N L  +P+ IG+ +++  LDL  N +L +P +I  
Sbjct: 224 ENKIKHLPAE-IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN 282

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
            CSL+   +  N LSA+P  L K S+L  L+L                       NN++S
Sbjct: 283 LCSLSRLGLRYNRLSAVPRSLAKCSELDELNLE----------------------NNNIS 320

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP                     L SSLV   +  L +      P    S+ ST     
Sbjct: 321 TLP-------------------EGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTI---- 357

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQT 407
                        L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  
Sbjct: 358 -----------YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE 406

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L+ N++   P+ + + L S+  L L NN L+++P  G  ++  L+ LDL  N + SLP
Sbjct: 407 LNLATNQLTKIPEDV-SGLVSIEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLESLP 464

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
               +  L  LQ+L L   QL   P  I  L  L  L L +N L  +PE    L +L EL
Sbjct: 465 NEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522

Query: 527 DLSDN-NISALPPELV 541
            L+DN N+ +LP EL 
Sbjct: 523 YLNDNPNLHSLPFELA 538



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 223/478 (46%), Gaps = 51/478 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD++  SI  +P  I   T + +     N+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  +   ++   + LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLCMLDLRHNKLREIPA-VVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 CSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L S+  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSIEVLILSNNLLKKLPH-GIGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP    +  L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDNN------------------------ISALPPELVS 542
            L  +PE    L +L EL L+DN                         +S LPP++V+
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVA 562



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 214/447 (47%), Gaps = 47/447 (10%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            S ++ +K P+    A+ + K   ++  +KEL  S  R  N +    +   I  LP  + 
Sbjct: 66  FSVDNTIKRPN---PASGMRKKASNAEVIKEL--SKCREENATRLDLAKKSIHMLPVSIK 120

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D +++++L + GNKL  L    +     L +L  S+N L  +P+++ +L +L  LDL  N
Sbjct: 121 DLTQITELYLYGNKLQSLPAE-VGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHN 179

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           ++  IP+ +    SL   ++  N ++A+  ++  LSKL  L +  N++K    E  +L  
Sbjct: 180 KLREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGELCN 239

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  LD+++N L  LP EIG  T +  L L  N L  L  ++ N                 
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN----------------- 282

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                      L +++         L L    LSA+P  + +  E+ +L+L  N+I  LP
Sbjct: 283 -----------LCSLS--------RLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLP 323

Query: 397 PEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L SS   + +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  
Sbjct: 324 EGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSK 383

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L++  N + SLP +  F +   + EL L   QL + P D+  L  + +L LS N L+ +P
Sbjct: 384 LNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLP 441

Query: 515 EGFKNLTSLTELDLSDNNISALPPELV 541
            G  NL  L ELDL +N + +LP E+ 
Sbjct: 442 HGIGNLRKLRELDLEENKLESLPNEIA 468



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 208/461 (45%), Gaps = 79/461 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L KL L+ N++  L + L NL  L +L++ HNKL E+PA +  L  L +L + FN I 
Sbjct: 146 VNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 AVEKDIKTLSKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+L  L RL L  NR+ ++P 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLCSLSRLGLRYNRLSAVPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEA-CQLR------ 276
           S++ C  L E  + NN +S LP   L  L K+ +L L  N  + Y V    Q        
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 277 -------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---R 314
                              LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              I    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSIEVLILSNNLLKKLPHG------------IGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI    ++ KL L+ N +  LP  +    +L  L L  N +   P+ I T L +L  L L
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYL 524

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++NP           +P    L    +I S+ EN P S LP
Sbjct: 525 NDNP-------NLHSLPFELALCSKLSIMSI-ENCPLSHLP 557



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 38/221 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  + VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIASW-TMLTELIASKNLLNGM 199
           SK+S + +E   L+ L   ++A   + + + +  + L   M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGLYRAM 581


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 176/379 (46%), Gaps = 66/379 (17%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++ +++L+ LPA IG L  L  L +  N +  +P EIG  T L + D S NQLK L
Sbjct: 18  VTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKAL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+D    NN +T+LP+++ + + ++ L ++ N+LT L              
Sbjct: 78  PEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTAL-------------- 123

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     PE IG L  L RL L+ NR+  +P  I     L      NN L  LP E+
Sbjct: 124 ----------PEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEI 173

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    L  L L +NQL+E   +   L  L+ L + NN L+ LP EIG +T L +L L  N
Sbjct: 174 GNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNN 233

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L   + N                             +T  T L++ S +       
Sbjct: 234 KLTELLKEIGN-----------------------------LTHLTALAIDSNQ------- 257

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD--AILTSL 426
           L ++P E+ +   +T L L +N +  LP  + +   L  L L  N++   P    ILT+L
Sbjct: 258 LKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKEIGILTNL 317

Query: 427 SSLSCLKLDNNPLRQVPSD 445
           +SLS   LDNNPL   PS+
Sbjct: 318 TSLS---LDNNPLTSPPSE 333



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 155/292 (53%), Gaps = 2/292 (0%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           +  +  +L++L L+ N ++ L E++ NL  LT L + +N+L+ LP  IG L  L  L + 
Sbjct: 57  EIGQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLD 116

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P+EIG    L +    SN+L  LP  +G   +L+     NN + +LP+++ + 
Sbjct: 117 SNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNF 176

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             ++ L ++ N+L  L  + I + T LT L    N L  +P+ IG+L+ L +L L  N++
Sbjct: 177 INLTGLSLDNNQLRELPQD-IGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKL 235

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             +   I     L    + +N L +LP E+G+L  L TL L+ NQL         L  L+
Sbjct: 236 TELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLT 295

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            L L +N L+ LP EIG +T L  L L  NPL +  S ++   T A+L YLR
Sbjct: 296 KLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLR 347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 159/336 (47%), Gaps = 44/336 (13%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           ++  LDLH +++ ++P+ I     L    +  N L  LP E+G+L+ L  LDL  NQLK 
Sbjct: 17  KVTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKA 76

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E   L  L+ L L NN L+ LP EIG +T L  L L  N L                
Sbjct: 77  LPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQL---------------- 120

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               + LPE            LI + TRLS+ S  L+        +P EI     + +L 
Sbjct: 121 ----TALPEEIGK--------LINL-TRLSLYSNRLT-------GLPKEIGNLTHLNRLS 160

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
              N +  LP E+ +  +L  L L  N++++ P  I  +L++L+ L +DNN L  +P + 
Sbjct: 161 CDNNQLMTLPKEIGNFINLTGLSLDNNQLRELPQDI-GNLTNLTRLSIDNNKLTSLPKE- 218

Query: 447 FKDIPMLQILDLSYNIAS--LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
             ++  L  L L  N  +  L E     +L HL  L +   QL+  P ++ +L  L  L 
Sbjct: 219 IGNLTNLTQLSLDNNKLTELLKE---IGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLS 275

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L +N L S+P    NLT LT+L L  N ++ALP E+
Sbjct: 276 LYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKEI 311



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 26/215 (12%)

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           LI  A    VTS  L L    L+ +P+EI     +T+L L  N +  LPPE+    +L+ 
Sbjct: 9   LIEQAANDKVTS--LDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKE 66

Query: 408 LILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSD 445
           L LS N++K  P+ I                      + +L++L+ L LD+N L  +P +
Sbjct: 67  LDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEE 126

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             K I + ++   S  +  LP+     +L HL  L     QL   P +I     L  L L
Sbjct: 127 IGKLINLTRLSLYSNRLTGLPK--EIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSL 184

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             N L+ +P+   NLT+LT L + +N +++LP E+
Sbjct: 185 DNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEI 219



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  LR++P ++                 +L +L + +N +  L +++ NL  LT 
Sbjct: 181 GLSLDNNQLRELPQDI-------------GNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQ 227

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +NKL+EL   IG L  L +L +  N +  +P+E+G    L       NQL  LP++
Sbjct: 228 LSLDNNKLTELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTA 287

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G   +L+     +N +T+LP+++   + ++ L ++ N LT
Sbjct: 288 IGNLTHLTKLSLYSNQLTALPKEIGILTNLTSLSLDNNPLT 328


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 154/270 (57%), Gaps = 4/270 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL    +  N +T+ P+++    K+ +L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQEL 191

Query: 166 DVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           ++  N+LT L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ ++P 
Sbjct: 192 NLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPE 249

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  L+L 
Sbjct: 250 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG 309

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L+ LP EIG++  L++L L  N L TL
Sbjct: 310 FNQLTTLPQEIGQLQNLQELNLEFNQLATL 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 165/334 (49%), Gaps = 15/334 (4%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N     +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   
Sbjct: 40  LTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D  SN+L  LP  +G+  NL       N +T LP+++     +  L+++ NKLT+L    
Sbjct: 100 DLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEK- 158

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L +  N L   P+ IG L +L  L+L  NR+ ++   +    +L    + +
Sbjct: 159 IGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS 218

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+LSKL  L L+ NQL     E  QL +L  L L NN L  LP EI ++ 
Sbjct: 219 NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 278

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L GN + T          P  +  L++    N      TT    I     L   
Sbjct: 279 KLQTLYLEGNQITTF---------PKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNL--- 326

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            +EL+LE   L+ +P E+ +  ++ KL+L  N I
Sbjct: 327 -QELNLEFNQLATLPKEVGQLQKLRKLNLYNNPI 359



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 156/330 (47%), Gaps = 40/330 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L         P  +  L+
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------PEKIGQLQ 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +    N      TT    I    +L    +EL+L    L+ +  E+ +   +  LDL  N
Sbjct: 164 NLQILNSQGNQLTTFPKEIGQLQKL----QELNLGFNRLTTLREEVVQLQNLQILDLISN 219

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I
Sbjct: 220 PLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEI 274

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
             LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N L
Sbjct: 275 EQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 313

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++P+    L +L EL+L  N ++ LP E+
Sbjct: 314 TTLPQEIGQLQNLQELNLEFNQLATLPKEV 343



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 1/225 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+  +  +LQ L L  N +  L E +  L  L +LN   N+L+  P  IG+L  L+ L++
Sbjct: 134 DEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNL 193

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            FN +  + +E+     L   D  SN L  LP  +G+   L       N +T+LPE++  
Sbjct: 194 GFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ 253

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             K+ +L +  N L  L    I     L  L    N +   P+ IG L  L  L+L  N+
Sbjct: 254 LKKLQELYLGNNPLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 312

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           + ++P  I    +L E  +  N L+ LP E+G+L KL  L+L++N
Sbjct: 313 LTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 257 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTL 316

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 317 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 361


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 189/369 (51%), Gaps = 39/369 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L +L L+ N ++ L +++  L  +  L++S+N+L+ LP  IG+L  L+ LD++ N 
Sbjct: 61  ELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNL 120

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D ++NQLK LP  +G+  NL +    NN + +LP+D+     +
Sbjct: 121 LTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L ++GN+L  L  + I     LTEL  + N L  +P+ IG+L  L  L L  N + ++
Sbjct: 181 RELYLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTL 239

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+     +  QL+ L VL 
Sbjct: 240 PKEIGKLKNLQVSYLG-ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLY 298

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS N L+ LP EIG++  LR+L L+GN + TL         P  +  L+S          
Sbjct: 299 LSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKDIGELQSL--------- 340

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             +EL+L G  L+ +P +I +   + +L+L  N I  +P E+  
Sbjct: 341 ------------------RELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 402 CASLQTLIL 410
             +LQ L L
Sbjct: 383 LKNLQVLYL 391



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 185/403 (45%), Gaps = 65/403 (16%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL++   S+N + +LP+++    K+ +L +  N+LT L  + I     L E
Sbjct: 55  LPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD-IGKLKKLRE 113

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  + NLL  +P+ IG L  L  LDL  N++ ++P  I    +L E Y+ NN L  LP +
Sbjct: 114 LDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKD 173

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L  NQLK    +  +L+ L+ L+L+NN L+ LP +IG +  L +LLL  
Sbjct: 174 IGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL         P  +  L++                             ++S  G 
Sbjct: 234 NELTTL---------PKEIGKLKNL----------------------------QVSYLGA 256

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P++I     + +L+LS N I  LP ++    +LQ L LS N++   P  I   L 
Sbjct: 257 LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEI-GQLQ 315

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
           +L  L L  N +  +P D                            L  L+EL L    L
Sbjct: 316 NLRELDLSGNQITTLPKD-------------------------IGELQSLRELNLSGNLL 350

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
              P DI +LQ LR L+L  N + +IP+   +L +L  L L D
Sbjct: 351 TTLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 393



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 179/336 (53%), Gaps = 32/336 (9%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L  LDL+NN L+ LP EIG++  LR+L LT N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDI------GQLQNLR 158

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
               +N  ++  T  +D+  +        +EL L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ELYLDN--NQLKTLPKDIGQLQNL-----RELYLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILT----SLSSLSCLKLDNNPLRQVPSD- 445
            +  LP ++ +  +L  L+L  N++   P  I       +S L  L      L  +P+D 
Sbjct: 212 PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGAL------LTTLPNDI 265

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           G+  +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LD
Sbjct: 266 GY--LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELD 321

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LS N + ++P+    L SL EL+LS N ++ LP ++
Sbjct: 322 LSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDI 357



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+L+N  L+ +P ++   +N  E    +   + +        +L++L L  N ++ L +D
Sbjct: 137 LDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKD 196

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  LT LN+++N L+ LP  IG L  L  L +  N +  +P EIG    L +     
Sbjct: 197 IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNL-QVSYLG 255

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
             L  LP+ +G   +L +   S N IT+LP+D+     +  L +  N+L  L    I   
Sbjct: 256 ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKE-IGQL 314

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N +  +P+ IG L  L  L+L  N + ++P  I    SL E  +G N ++
Sbjct: 315 QNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQIT 374

Query: 244 ALPAELGKLSKLGTLDL 260
            +P E+G L  L  L L
Sbjct: 375 TIPKEIGHLKNLQVLYL 391



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 151/341 (44%), Gaps = 64/341 (18%)

Query: 252 LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 299 TLRKLLLTGNPLRTL-----------RSSLVNGPTPAL------LKYLRSRLPENEDSEA 341
            L +L L+ N L+TL           R SL N     L      LK LR         E 
Sbjct: 64  NLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR---------EL 114

Query: 342 STTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             T   L T+   +      +EL L    L  +P +I +   + +L L  N ++ LP ++
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDI 174

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF------------ 447
               +L+ L L  N++K  P  I   L +L+ L L NNPL  +P D              
Sbjct: 175 GQLQNLRELYLDGNQLKTLPKDI-GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233

Query: 448 -------KDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
                  K+I  L+ L +SY  A L   P     L  L+EL L   Q+   P DI +LQ 
Sbjct: 234 NELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQN 293

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L++L LS+N L ++P+    L +L ELDLS N I+ LP ++
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDI 334


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 224/455 (49%), Gaps = 57/455 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK                L  L L  N ++ + +++
Sbjct: 211 LKSLRV---LDLRHNKLNEIPDVVYK-------------LTSLTTLFLRFNRVKYVNDNI 254

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           R L  LT+L++  NK+ ELPA +GEL  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 255 RYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 314

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N ++++P+ LA+C  M +  VEGN+++ L + L++S +
Sbjct: 315 ELLDIPDTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLS 374

Query: 185 MLTELIASKNLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P    S  + +  ++L  N+I  IP +I S   +L +  M  N L
Sbjct: 375 DLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQL 434

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +   L+ L +L LSNN L  +P  I  +  LR
Sbjct: 435 TALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLR 494

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR                             ++
Sbjct: 495 VLDLEENRIDSL---------PNEIGFLREL---------------------------QK 518

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPD 420
           L L+   + ++P  I     +T L +  N++  LP E+ +  +L++L ++ N  + + P 
Sbjct: 519 LILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLESLYINDNANLHNLPF 578

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             L   ++LS + ++N PL Q+P++     P L I
Sbjct: 579 E-LALCTNLSIMSIENCPLSQIPAEIVAGGPSLVI 612



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 214/456 (46%), Gaps = 28/456 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S  SI  +P  +   T L +F    N+L  LP  +G   NL     S N +TSL
Sbjct: 145 VKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSL 204

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL  +  +++   T LT L    N +  + + I  L+ L  L
Sbjct: 205 PNTLENLKSLRVLDLRHNKLNEIP-DVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTML 263

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ +    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 264 SLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 323

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLK 327
             L  L+ L L  N LS +P  +     + +  + GN +      L SSL +  T  L +
Sbjct: 324 GNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSR 383

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    S+ +                   ++LE   +  IP  I+  A  +TKL+
Sbjct: 384 NNFTAYPSGGPSQFTNV---------------YSINLEHNKIDKIPYAIFSRAKNLTKLN 428

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP ++ +  ++  L L  N++   PD I   L SL  L L NN L+++P+  
Sbjct: 429 MKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDI-QYLKSLEILILSNNLLKRIPAT- 486

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L +
Sbjct: 487 IANLRKLRVLDLEENRIDSLPNEIGF--LRELQKLILQSNQVVSLPRAIGHLTNLTYLSV 544

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +N+L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 545 GENNLNYLPEEIGTLENLESLYINDNANLHNLPFEL 580



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 208/473 (43%), Gaps = 105/473 (22%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N++  L   L NL  L VL++ HNKL+E+P  + +L  L +L + FN +  
Sbjct: 190 NLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVKY 249

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I   T L       N++KELP+ +G  +NL  F  S+N +  LPE++ +C ++S L
Sbjct: 250 VNDNIRYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTL 309

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG+L  L RL L  NR+ +IP S
Sbjct: 310 DLQHNELL------------------------DIPDTIGNLVSLTRLGLRYNRLSNIPKS 345

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE----------------- 267
           ++ C  + EF +  N +S LP   L  LS L T+ L  N                     
Sbjct: 346 LANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNVYSINL 405

Query: 268 ---------YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                    Y + +    L+ L++  N L+ LP +IG    + +L L  N L  +     
Sbjct: 406 EHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKI----- 460

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
               P  ++YL+S               +++ ++  L             L  IP+ I  
Sbjct: 461 ----PDDIQYLKSL--------------EILILSNNL-------------LKRIPATIAN 489

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             ++  LDL  N I  LP E+     LQ LIL  N++   P AI   L++L+ L +  N 
Sbjct: 490 LRKLRVLDLEENRIDSLPNEIGFLRELQKLILQSNQVVSLPRAI-GHLTNLTYLSVGENN 548

Query: 439 LRQVPSD--GFKDIPMLQILDLSYNIASLP--------------ENPPFSSLP 475
           L  +P +    +++  L I D + N+ +LP              EN P S +P
Sbjct: 549 LNYLPEEIGTLENLESLYIND-NANLHNLPFELALCTNLSIMSIENCPLSQIP 600



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 158/351 (45%), Gaps = 25/351 (7%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL +  I ++PSS+     L EFY+  N L+ LP E+G L+ L TL L  N L     
Sbjct: 147 RLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSLPN 206

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               L+ L VLDL +N L+ +P  + K+T+L  L L  N     R   VN     L    
Sbjct: 207 TLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFN-----RVKYVNDNIRYLTNLT 261

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSAIP 373
              L EN+  E      +L+ + T   V+   L                 L+   L  IP
Sbjct: 262 MLSLRENKIKELPAGVGELVNLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 320

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L+SLS L+ + 
Sbjct: 321 DTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTIT 380

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N     PS G      +  ++L +N I  +P    FS   +L +L ++  QL   P 
Sbjct: 381 LSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPY-AIFSRAKNLTKLNMKENQLTALPL 439

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DI     +  L+L  N L  IP+  + L SL  L LS+N +  +P  + ++
Sbjct: 440 DIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANL 490


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL    L  +PNE+              + ++LQ L L HN +  L +++  L  L V
Sbjct: 96  TLNLDTNQLTTLPNEI-------------GQLINLQTLDLIHNQLVILPKEINQLQNLRV 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L  LP  IG+L  L++LD+  N +  +P+EIG    L   D S N L  LP  
Sbjct: 143 LGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   S+N + +LP+++     +  L +  N+LT L N  I     L EL   
Sbjct: 203 IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLG 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KNLL  +P+ +G L  L  LDL  N+   IP+ I    +L    + NN  +ALP E+ +L
Sbjct: 262 KNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L L++NQLK    E  +L+ L VLDL++N L  LP EI K+  L+ L L  N L
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNEL 380



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +P E+              +  +LQ L L +N +  L  ++  L  L  L
Sbjct: 51  LDLSEQKLKTLPKEI-------------GQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ LP  IG+L  L++LD+  N ++ +P EI     L     S+NQLK LP  +
Sbjct: 98  NLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N + +LP ++     +  LD+  N LT+L    I     L EL  S 
Sbjct: 158 GQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKE-IGQLKNLRELYLSS 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L L  N++ ++P+ I    +L E Y+G N L+ LP E+G+L 
Sbjct: 217 NQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLK 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQ K    E  QL+ L  L L NN  + LP EI ++  L+ L L  N L+T
Sbjct: 277 NLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKT 336

Query: 313 L 313
           L
Sbjct: 337 L 337



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 192/402 (47%), Gaps = 69/402 (17%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+++     +  L +  N+LT L N  I     L  L    N
Sbjct: 49  RVLDLSEQK-----LKTLPKEIGQLQNLQTLYLWNNQLTTLPNE-IGQLKNLQTLNLDTN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL  N+++ +P  I+   +L    + NN L  LP E+G+L  
Sbjct: 103 QLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLEN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TLDL++NQLK    E  QL+ L  LDLS N L+ LP EIG++  LR+L L+ N L+TL
Sbjct: 163 LQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L                E+L T           L L    L+ +P
Sbjct: 223 ---------PKEIGQL----------------ENLQT-----------LHLSDNQLTTLP 246

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   + +L L +N +  LP E+    +L+ L L  N+ K  P+ I   L +L  L+
Sbjct: 247 NEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEI-EQLQNLRTLR 305

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN    +P +  + +  LQ+L L+ N                        QL+  P +
Sbjct: 306 LRNNQFTALPKE-IRQLQNLQVLFLNNN------------------------QLKTLPNE 340

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           I +LQ L++LDL+ N L+++P   + L +L  LDL +N +S+
Sbjct: 341 IEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELSS 382



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 170/369 (46%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L++L +  N +  +P+EIG    L   +  +NQL  LP+
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+ +NL      +N +  LP+++     +  L +  N+L +L    I     L  L  
Sbjct: 110 EIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKE-IGQLENLQTLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  LDL +N +  +P  I    +L E Y+ +N L  LP E+G+
Sbjct: 169 YTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL     E  QL+ L  L L  N L+ LP E+G++  L+ L L  N  
Sbjct: 229 LENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQF 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           + + + +                            E L  + T        L L     +
Sbjct: 289 KIIPNEI----------------------------EQLQNLRT--------LRLRNNQFT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           A+P EI +   +  L L+ N ++ LP E+    +LQ L L+ N++K  P+ I   L +L 
Sbjct: 313 ALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEI-EKLQNLQ 371

Query: 431 CLKLDNNPL 439
            L L NN L
Sbjct: 372 VLDLRNNEL 380



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 35/253 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LSN  L+ +P E+              +  +LQ L L  N ++ L  ++  L  L  L
Sbjct: 143 LGLSNNQLKILPKEI-------------GQLENLQTLDLYTNQLKALPNEIGQLKNLQTL 189

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N L+ LP  IG+L  L+ L +S N +  +P EIG    L     S NQL  LP+ +
Sbjct: 190 DLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI 249

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL +     N +T+LP+++     +  LD+  N+  ++ N +              
Sbjct: 250 GQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNN 309

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L  L  + N L  +P  I  L  L  LDL+ N++ ++P+ I    +
Sbjct: 310 QFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQN 369

Query: 232 LAEFYMGNNALSA 244
           L    + NN LS+
Sbjct: 370 LQVLDLRNNELSS 382



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L  +P EI +   +  L L  N +  LP E+    +LQTL
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++   P+ I   L +L  L L +N L  +P +    +  L++L LS N +  LP+
Sbjct: 98  NLDTNQLTTLPNEI-GQLINLQTLDLIHNQLVILPKE-INQLQNLRVLGLSNNQLKILPK 155

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ L L   QL+  P +I +L+ L+ LDLS+N L  +P+    L +L EL 
Sbjct: 156 --EIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELY 213

Query: 528 LSDNNISALPPEL 540
           LS N +  LP E+
Sbjct: 214 LSSNQLKTLPKEI 226



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +PNE+       G+    +E      L L  N +  L +++  L  L +
Sbjct: 234 TLHLSDNQLTTLPNEI-------GQLKNLYE------LYLGKNLLTTLPKEVGQLKNLKM 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+   +P  I +L  L++L +  N    +P EI     L     ++NQLK LP+ 
Sbjct: 281 LDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + +  NL     ++N + +LP ++     +  LD+  N+L+
Sbjct: 341 IEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELS 381


>gi|260821310|ref|XP_002605976.1| hypothetical protein BRAFLDRAFT_126569 [Branchiostoma floridae]
 gi|229291313|gb|EEN61986.1| hypothetical protein BRAFLDRAFT_126569 [Branchiostoma floridae]
          Length = 519

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 177/386 (45%), Gaps = 86/386 (22%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVY----------KNFDEAGEGDKWWEAVDLQKLILA 53
           +LK AR SG LNLSNR L  VP+ V+          KN    GE D+WWE VDL KLILA
Sbjct: 33  LLKQARKSGQLNLSNRGLEKVPDTVWRINLDVPEEAKNVTFDGE-DRWWEQVDLTKLILA 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N + +L  DL  LP L VL+V  N+L+ LP  IG+L  L+ L+VS      +P  +G  
Sbjct: 92  SNKLSELSPDLNQLPALVVLDVHDNELTSLPKEIGDLQHLQKLNVS------LPFSLGLM 145

Query: 114 TALVKFDCSSNQLKEL------------------------------------PSSLGRCL 137
           ++L   +   N L+ +                                    P++ G  +
Sbjct: 146 SSLKSVNLDGNPLRTIRRDVIQRGTSELLKYLRTRIEEPKGGDAAPLTPDPEPAAPGSTI 205

Query: 138 N------LSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +            SN    S+P+DL D  +   +S +++  N LT     L+     LT+
Sbjct: 206 DTFTVHKTKSINYSNKNAASIPDDLLDTGRDMFVSDMNLSKNVLTTFPVGLVQLAATLTD 265

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L+ +   IG L+RL  LDL   R    PS +     L   +  +N ++A+  +
Sbjct: 266 LNLSFNKLSALGAEIGQLTRLTTLDL---RFQQFPSVLYSLVKLENIFANDNHITAIDVD 322

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
                  G L L +              L+ LDL NN +  +PP++G +T+LR L L GN
Sbjct: 323 -------GLLKLPA--------------LATLDLQNNDIMQVPPQLGNVTSLRSLQLGGN 361

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLP 334
           P R  R +++   T  LL+YLR R+P
Sbjct: 362 PFRVPRPAILAKSTADLLEYLRGRIP 387



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 47/323 (14%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + +N LS L  +L +L  L  LD+H N+L     E   L+ L  L++S      L
Sbjct: 85  LTKLILASNKLSELSPDLNQLPALVVLDVHDNELTSLPKEIGDLQHLQKLNVS------L 138

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED--- 347
           P  +G M++L+ + L GNPLRT+R  ++   T  LLKYLR+R+ E +  +A+    D   
Sbjct: 139 PFSLGLMSSLKSVNLDGNPLRTIRRDVIQRGTSELLKYLRTRIEEPKGGDAAPLTPDPEP 198

Query: 348 ---LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSS 401
                T+ T     +K ++    N ++IP ++ + G    ++ ++LS+N +   P  L  
Sbjct: 199 AAPGSTIDTFTVHKTKSINYSNKNAASIPDDLLDTGRDMFVSDMNLSKNVLTTFPVGLVQ 258

Query: 402 -CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
             A+L  L LS NK+     A +  L+ L+ L L     +Q PS  +             
Sbjct: 259 LAATLTDLNLSFNKLSAL-GAEIGQLTRLTTLDLR---FQQFPSVLY------------- 301

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIPEGFKN 519
                       SL  L+ ++     +     D +L+L  L  LDL  N +  +P    N
Sbjct: 302 ------------SLVKLENIFANDNHITAIDVDGLLKLPALATLDLQNNDIMQVPPQLGN 349

Query: 520 LTSLTELDLSDNNISALPPELVS 542
           +TSL  L L  N      P +++
Sbjct: 350 VTSLRSLQLGGNPFRVPRPAILA 372



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 37/201 (18%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-------------- 422
           WE  ++TKL L+ N + EL P+L+   +L  L +  N++   P  I              
Sbjct: 80  WEQVDLTKLILASNKLSELSPDLNQLPALVVLDVHDNELTSLPKEIGDLQHLQKLNVSLP 139

Query: 423 --LTSLSSLSCLKLDNNPLRQVPSDGFK--DIPMLQILDL------SYNIASLPENP--- 469
             L  +SSL  + LD NPLR +  D  +     +L+ L          + A L  +P   
Sbjct: 140 FSLGLMSSLKSVNLDGNPLRTIRRDVIQRGTSELLKYLRTRIEEPKGGDAAPLTPDPEPA 199

Query: 470 -PFSSLPHL-----QELYLRRMQLREAPTDIL---RLQQLRILDLSQNSLQSIPEGFKNL 520
            P S++        + +          P D+L   R   +  ++LS+N L + P G   L
Sbjct: 200 APGSTIDTFTVHKTKSINYSNKNAASIPDDLLDTGRDMFVSDMNLSKNVLTTFPVGLVQL 259

Query: 521 -TSLTELDLSDNNISALPPEL 540
             +LT+L+LS N +SAL  E+
Sbjct: 260 AATLTDLNLSFNKLSALGAEI 280


>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1196

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 239/493 (48%), Gaps = 45/493 (9%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +N++   L +LP +I     L+   ++ N +  +P E+     L K +  SN+  ++P  
Sbjct: 80  INLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVP 139

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L     ++N +TS+ + + +  ++ KL++ GNKL  ++ + I +   L EL  S
Sbjct: 140 IFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKL--INIDYITTLLKLEELHLS 197

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS--------------------GCCSL 232
            N +  +P +IG +S L  L L +N + ++PS I                     G C L
Sbjct: 198 NNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFPPGLCEL 257

Query: 233 AE---FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            E     + NN +S +P ++  LS+L  LDL  NQ+       C L+ L  L L+ N L+
Sbjct: 258 NEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNINKLT 317

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            +P +I K+  L+ L L+ N L  +  +L + P     K  +  L  N  S   +   +L
Sbjct: 318 CIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMP-----KLTKLTLDGNGLSAIPSAIRNL 372

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             +        ++L L   N+S IPSE+    ++ +L L  N ++ +P E+ +   L+ L
Sbjct: 373 RNL--------QKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKL 424

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N+     D+ L+SL  LS LKL+ N LR VP + FK +  LQ+L ++ N I  +PE
Sbjct: 425 DLSHNEGISGADS-LSSLDELSELKLNKNNLRSVP-NMFK-LKKLQVLHMNDNLIKEIPE 481

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                +L  L+EL+L   QL   P++I  L  LR L L  N L  I      L+ L  L+
Sbjct: 482 E--IQNLYSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLN 539

Query: 528 LSDNNISALPPEL 540
           L  N +  LP E+
Sbjct: 540 LEYNKLKTLPEEV 552



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 215/472 (45%), Gaps = 52/472 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++  L LA+NNI  +  D+ NL  L VL++ +N+++ +P A+ +L  L  L ++ N +  
Sbjct: 259 EVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNINKLTC 318

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP +I     L     S NQL E+P +L     L+      N ++++P  + +   + KL
Sbjct: 319 IPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNLRNLQKL 378

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N ++V+ + L+     L EL    N L  +P  IG+L +L +LDL  N  +S   S
Sbjct: 379 DLSNNNISVIPSELL-HMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADS 437

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +S    L+E  +  N L ++P  + KL KL  L ++ N +KE   E   L  L  L L  
Sbjct: 438 LSSLDELSELKLNKNNLRSVP-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKELWLDY 496

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL----------------------VNGPT 322
           N L+ +P EIG++T LR+L L  N L  +  ++                      VN   
Sbjct: 497 NQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEVNNLI 556

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              ++   + + ++ D E+S  KED   +  R S   +   L G    +IP    +    
Sbjct: 557 DCDIRLKGNPMSQDLDKESSYHKEDTKVVRIRRSQEYQSHKLPGGYFISIPPRAVQ---- 612

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             +D+    +++L PEL    ++++ ++   K+      +L S   + C        +  
Sbjct: 613 NDVDIKVQVVEDLQPELMDYPTMESNVI---KLSGETQVLLNSAVKVGC--------QCK 661

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPP------------FSSLPHLQELYL 482
            +DG +D  +L+  D+   + S  E+              F+S PH + LY+
Sbjct: 662 SADGLRDFALLKKEDVWTTLKSTREDQTVSTEVTDLGMFVFASRPHTEVLYV 713



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 170/334 (50%), Gaps = 20/334 (5%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           ++L++  +  +P+SISG  +L +  + NN L+ LP EL +L +L  ++L SN+  +  V 
Sbjct: 80  INLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVP 139

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L++++N L+ +   I  +  LRKL L+GN L  +           LLK   
Sbjct: 140 IFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINI------DYITTLLKLEE 193

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  NE      +  D+  +          L L+  NL+ +PS+I +  ++ ++D+S N
Sbjct: 194 LHLSNNEIQSLPASIGDMSDLTV--------LYLDKNNLTTLPSDIKKLHQLERIDVSSN 245

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            I+  PP L     + +L L+ N I   P  I  +LS L  L L+ N +  +P     D+
Sbjct: 246 QIEIFPPGLCELNEVTSLRLANNNISLIPPDI-ANLSELLVLDLEYNQIANIPP-ALCDL 303

Query: 451 PMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              Q+++L+ NI  L   P     L  LQ L L   QL E P  +  + +L  L L  N 
Sbjct: 304 K--QLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNG 361

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L +IP   +NL +L +LDLS+NNIS +P EL+ +
Sbjct: 362 LSAIPSAIRNLRNLQKLDLSNNNISVIPSELLHM 395



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 20/397 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L++N I+ L   + ++  LTVL +  N L+ LP+ I +LH L+ +DVS N I   
Sbjct: 191 LEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIF 250

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +     +     ++N +  +P  +     L       N I ++P  L D  ++ +L 
Sbjct: 251 PPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELT 310

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKLT + ++ I     L  L  S N LN +P  +  + +L +L L  N + +IPS+I
Sbjct: 311 LNINKLTCIPSD-IKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAI 369

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L +  + NN +S +P+EL  +++L  L L SNQLK    E   L +L  LDLS+N
Sbjct: 370 RNLRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHN 429

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
                   +  +  L +L L  N LR++         P + K  + ++    D+      
Sbjct: 430 EGISGADSLSSLDELSELKLNKNNLRSV---------PNMFKLKKLQVLHMNDNLIKEIP 480

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           E++  +      + KEL L+   L++IPSEI E   + +L L  N + E+ P +   + L
Sbjct: 481 EEIQNL-----YSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSML 535

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSC-LKLDNNPLRQ 441
           + L L  NK+K  P+ +    + + C ++L  NP+ Q
Sbjct: 536 RHLNLEYNKLKTLPEEV---NNLIDCDIRLKGNPMSQ 569



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 8/209 (3%)

Query: 338 DSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           D E +  K  L  + T +S     ++  L    L+ +P+E+ E   + K++L  N   ++
Sbjct: 77  DEEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQM 136

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +     L  L ++ N +     +I T+L  L  L L  N L  +  D    +  L+ 
Sbjct: 137 PVPIFKLHKLHKLNMADNHLTSINQSI-TNLKQLRKLNLSGNKLINI--DYITTLLKLEE 193

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L LS N I SLP +     +  L  LYL +  L   P+DI +L QL  +D+S N ++  P
Sbjct: 194 LHLSNNEIQSLPAS--IGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFP 251

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
            G   L  +T L L++NNIS +PP++ ++
Sbjct: 252 PGLCELNEVTSLRLANNNISLIPPDIANL 280



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 14/125 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+  +LR VPN               ++   LQ L +  N I+++ E+++NL  L  L
Sbjct: 447 LKLNKNNLRSVPN--------------MFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKEL 492

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ +P+ IGEL  L+ L +  N + +I   IG  + L   +   N+LK LP  +
Sbjct: 493 WLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEV 552

Query: 134 GRCLN 138
              ++
Sbjct: 553 NNLID 557


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 219/453 (48%), Gaps = 60/453 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D+RNL  LT+L
Sbjct: 174 LDLRHNKLREIPAVVYR-------------LTSLTTLYLRFNRITTVEKDIRNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 281 GNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  N I  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P  + YL+                DL           ++L L    
Sbjct: 459 KLECL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +Q LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIP--MLQILDL 458
            L+ + ++N PL  +P+      P  ++Q L +
Sbjct: 542 KLAIMSIENCPLTHLPAQIVAGGPSFIIQFLKM 574



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 217/454 (47%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I     L +    SN+L+ LP+ +G    L     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L    K+  LD+  NKL  +   ++   T LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDSLKKLRMLDLRHNKLREIPA-VVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNL 283

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             ++ L L  N LS +P  + K   L +L L  N +  L     SSLVN  +  L +   
Sbjct: 284 ASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E  +++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNHINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ +   L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLAKIPEDV-CGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N +  LP    +  L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLECLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            LQ +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLAKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK++ + +E   LT L   ++A 
Sbjct: 541 SKLAIMSIENCPLTHLPAQIVAG 563



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P+ I E  ++ +L L  N +Q LP E+   + L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L SL  L  L L +N LR++P+  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDSLKKLRMLDLRHNKLREIPAVVYR-LTSLTTLYLRFNRITTVEKD-IRNLSKLT 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPE 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLS 328


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 181/372 (48%), Gaps = 15/372 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK 391

Query: 404 SLQTLILSRNKI 415
           +LQTL L  N+ 
Sbjct: 392 NLQTLNLWNNQF 403



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 184/394 (46%), Gaps = 40/394 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT+L    I     L EL  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE-IGQLQNLQELYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L L+++++  +P  I    +L E  + +N L+ LP E+G+
Sbjct: 169 SYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L    L +NQL     E  +L+ L  L L +N L+ LP EIG++  L++ +L  N  
Sbjct: 229 LQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L         P  +  L++                            +EL L    L+
Sbjct: 289 TIL---------PKEIGQLQNL---------------------------QELYLSYNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +  ++  L+L  N +  LP E+    +L+TL LS N++K  P  I   L +L 
Sbjct: 313 TFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEI-GQLQNLK 371

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
            L L NN L  +P +  + +  LQ L+L  N  S
Sbjct: 372 SLDLSNNQLTTLPKE-IEQLKNLQTLNLWNNQFS 404



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 174/354 (49%), Gaps = 19/354 (5%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKE--IGKLQKLQTLNLWNNQ 333

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEI 387



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 20/292 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +P E+              +  +LQ+L L++N +  L +++  L  L +L
Sbjct: 143 LDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEIGKLENLQLL 189

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +NQL  LP  +
Sbjct: 190 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +    +N +T LP+++     + +  ++ N+ T+L    I     L EL  S 
Sbjct: 250 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLSY 308

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L   P+ IG L +L  L+L  N++ ++P  I    +L    +  N L  +P E+G+L 
Sbjct: 309 NQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 368

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            L +LDL +NQL     E  QL+ L  L+L NN  S    E      +RKLL
Sbjct: 369 NLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKE-----KIRKLL 415


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 179/372 (48%), Gaps = 38/372 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T+LP+++     +  
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  ++LT+L    I     L EL  S N L  +P+ IG L  L R  L  N++  +P 
Sbjct: 166 LSLYESQLTILPQE-IGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L    L +NQ      E  QL+ L  L LS
Sbjct: 225 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+  P EIGK+  L+ L L  N L TL         P  ++ L++            
Sbjct: 285 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTL---------PEEIEQLKNL----------- 324

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                           K L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 325 ----------------KTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK 368

Query: 404 SLQTLILSRNKI 415
           +LQTL L  N+ 
Sbjct: 369 NLQTLNLWNNQF 380



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 165/354 (46%), Gaps = 42/354 (11%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIGK+  L+ L L  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           + L  L   +  G    L                                   EL L   
Sbjct: 171 SQLTILPQEI--GKLQNL----------------------------------HELDLSHN 194

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 253

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 254 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKE--IGKLQKLQTLNLWNNQ 310

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+
Sbjct: 311 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEI 364



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + +LP+      L +LQ L L   QL   P +I +LQ L  LDLS N L  +P+ 
Sbjct: 145 LGNNQLTTLPKE--IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L    L +N ++ LP E+
Sbjct: 203 IGQLQNLQRFVLDNNQLTILPKEI 226


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 177/384 (46%), Gaps = 43/384 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y N  EA +        D+Q L L  N +  L +++  L  L  L+  +N+L  +P  I
Sbjct: 86  IYHNLTEALQN-----PTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEI 140

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ LD++ N +  IP EIG    L +     NQLK +P   G+  +L     SNN
Sbjct: 141 GKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNN 200

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP++  D   +  L +  N+L  L    I     L EL    N L  +P+ IG L 
Sbjct: 201 QLKTLPKEFGDLKSLQVLYLSNNQLKTLPKE-IRKLKKLQELALYNNQLKTLPKEIGKLQ 259

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++  +P       SL + Y+ N  L+  P E+G+L  L  L L +NQL  
Sbjct: 260 NLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTT 319

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +  E  +L+ L+ L LSNN L  LP +I K+  L+ L+L  N L T+             
Sbjct: 320 FPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTI------------- 366

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                    NE  E              L V    L+L    L+ IP+EI E   + +L+
Sbjct: 367 --------PNEIGELKN-----------LQV----LTLNNNQLTTIPNEIGELKNLRELN 403

Query: 387 LSRNSIQELPPELSSCASLQTLIL 410
           LSRN +Q LP E+    +LQ L L
Sbjct: 404 LSRNQLQALPKEIGHLKNLQELYL 427



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 172/354 (48%), Gaps = 42/354 (11%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  + N L  +P+ IG L +L  L  + N++ +IP  I    +L +  + +N L  +P E
Sbjct: 103 LYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKE 162

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +GKL  L  L L  NQLK    E  +L+ L VL LSNN L  LP E G + +L+ L L+ 
Sbjct: 163 IGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSN 222

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+TL         P  ++ L+                             +EL+L   
Sbjct: 223 NQLKTL---------PKEIRKLKK---------------------------LQELALYNN 246

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI +   +  L LS N +++LP E     SLQ L LS  ++  +P+ I   L 
Sbjct: 247 QLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEI-GELQ 305

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L+ L L NN L   P++   ++  L  L LS N + +LP+      L +LQ L L   Q
Sbjct: 306 NLTELYLSNNQLTTFPNE-IGELQNLTELYLSNNQLQALPK--KIEKLKNLQVLILNNNQ 362

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I  L+ L++L L+ N L +IP     L +L EL+LS N + ALP E+
Sbjct: 363 LTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEI 416



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 33/307 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAG-EGDK-------WWEAVDLQKLILAHNNIEKLKE 62
            L+L++  L+ +P E+ K  N  E G  G++       + +   LQ L L++N ++ L +
Sbjct: 148 KLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPK 207

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +  +L  L VL +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L     S
Sbjct: 208 EFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLS 267

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQLK+LP   G+  +L     SN  +T+ P ++ +   +++L +  N+LT   N  I  
Sbjct: 268 YNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNE-IGE 326

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              LTEL  S N L  +P+ I  L  L  L L+ N++ +IP+ I    +L    + NN L
Sbjct: 327 LQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQL 386

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + +P E+G+L                        L  L+LS N L  LP EIG +  L++
Sbjct: 387 TTIPNEIGELK----------------------NLRELNLSRNQLQALPKEIGHLKNLQE 424

Query: 303 LLLTGNP 309
           L L   P
Sbjct: 425 LYLDDIP 431


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 205/448 (45%), Gaps = 58/448 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L+++P  VY+                L  L L  N I  + E+L NL  LT+L
Sbjct: 134 LDLRHNKLKEIPEVVYR-------------LTSLTTLFLRFNRISDVDEELSNLTNLTML 180

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LP  IG L  L + DVS N +  +P EIG+   L   D   N+L +LP SL
Sbjct: 181 SLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSL 240

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    LS      N + ++P+ L +C  M + +VE N ++ L   L++S   LT L  S+
Sbjct: 241 GNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSR 300

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  IG     + +  +++  N I  IP  I +    L +  M  N L+ALP ++
Sbjct: 301 NNFNSYP--IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDV 358

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  +R L L  N
Sbjct: 359 GSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEEN 418

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P+ + YL S                            + L L+   
Sbjct: 419 KLESL---------PSEIAYLCSL---------------------------QRLVLQSNQ 442

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           LS +P  I   G +  L +  N++  LP E+ +  +L+ L L+ N  + + P   L   S
Sbjct: 443 LSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGTLENLEQLYLNDNPNLHNLPFE-LALCS 501

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           SL  + ++N PL Q+P +     P L I
Sbjct: 502 SLQIMSIENCPLSQLPQEVVAGGPSLVI 529



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 204/446 (45%), Gaps = 28/446 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N ++ L  ++  L  L  L +S N L+ LP ++  L ++K LD+  N + +I
Sbjct: 85  LVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLERLKVIKVLDLRHNKLKEI 144

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +   T+L       N++ ++   L    NL+      N I  LP+ + + + +   D
Sbjct: 145 PEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRKLPQGIGNLTHLITFD 204

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N L  L +  I +   L+ L    N L  +P+++G+L +L RL L  NR+ +IP S+
Sbjct: 205 VSHNHLEHLPSE-IGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIPKSL 263

Query: 227 SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLS 283
             C  + EF + NN +S+LP   L  L  L +L L  N    Y +       +V  +++ 
Sbjct: 264 CNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINME 323

Query: 284 NNSLSGLPPEI-GKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDS 339
           +N ++ +P  I  +   L KL +  N L  L     S ++     L     S+LP  ED 
Sbjct: 324 HNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLP--EDI 381

Query: 340 EASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +A T+ E LI     L             + L LE   L ++PSEI     + +L L  N
Sbjct: 382 QALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLVLQSN 441

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP  +    +LQ L +  N +   P+ I T L +L  L L++NP          ++
Sbjct: 442 QLSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGT-LENLEQLYLNDNP-------NLHNL 493

Query: 451 PMLQILDLSYNIASLPENPPFSSLPH 476
           P    L  S  I S+ EN P S LP 
Sbjct: 494 PFELALCSSLQIMSI-ENCPLSQLPQ 518



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 176/362 (48%), Gaps = 15/362 (4%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK+ ++ +P +I  L++L+ L L+ NR+  +P+ I    +L +  +  N+L++LP  L +
Sbjct: 68  SKSCISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLER 127

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  +  LDL  N+LKE      +L  L+ L L  N +S +  E+  +T L  L L  N +
Sbjct: 128 LKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKI 187

Query: 311 RTLRSSLVN-------GPTPALLKYLRSRLPENED-SEASTTKEDLITMATRLSVTSK-- 360
           R L   + N         +   L++L S +   E  S       +L+ +   L    +  
Sbjct: 188 RKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLS 247

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWP 419
            L L    L AIP  +    ++ + ++  N+I  LP   LSS  +L +L LSRN    +P
Sbjct: 248 RLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYP 307

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
               T  +++  + +++N + ++P   F     L  L++  N + +LP +    S   + 
Sbjct: 308 IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLD--VGSWMSMV 365

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L   QL + P DI  L  L +L LS N L+ +P G  NL  +  LDL +N + +LP 
Sbjct: 366 ELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPS 425

Query: 539 EL 540
           E+
Sbjct: 426 EI 427



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 41/266 (15%)

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           S LDLS + +S LP  I  +T L +L L GN L+ L         P  + YL +      
Sbjct: 63  SRLDLSKSCISVLPSSIKDLTQLVELYLYGNRLQYL---------PNEIGYLSNL----- 108

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                 ++L+L   +L+++P  +     I  LDL  N ++E+P 
Sbjct: 109 ----------------------QKLALSENSLTSLPVSLERLKVIKVLDLRHNKLKEIPE 146

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
            +    SL TL L  N+I D  D  L++L++L+ L L  N +R++P  G  ++  L   D
Sbjct: 147 VVYRLTSLTTLFLRFNRISDV-DEELSNLTNLTMLSLRENKIRKLP-QGIGNLTHLITFD 204

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           +S+N +  LP      +   L  L L+  +L + P  +  L+QL  L L  N LQ+IP+ 
Sbjct: 205 VSHNHLEHLPSE--IGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIPKS 262

Query: 517 FKNLTSLTELDLSDNNISALPPELVS 542
             N   + E ++ +NNIS+LP  L+S
Sbjct: 263 LCNCLDMEEFNVENNNISSLPEGLLS 288


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 29/395 (7%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLK------EDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           E  ++WE V ++   +   ++E +        ++  LP L  L++ HN+L+ LPA IG+L
Sbjct: 13  EQPEYWEGVTIENGRVVELDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQL 72

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L  L ++ N +  +P EIG   +L     + NQL  +P+ + +  +L       N +T
Sbjct: 73  PSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLT 132

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           S+PE++   + + +L + GN+LT      I   + L  L  S N    +P  IG L+ L 
Sbjct: 133 SVPEEIGQLTSLRRLFLSGNQLTS-----IGLLSALRGLGVSGNQRTSVPAEIGQLTSLE 187

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L+LH N++ S+P+ I    SL    +  N L++LPA +G+L+ L  L L  N+L     
Sbjct: 188 VLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPA 247

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL  L  L L +N L+ LP EIG++ +L  L L GN L +L         PA +  L
Sbjct: 248 EIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSL---------PAGIGQL 298

Query: 330 RS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            S   L  NE+   S   E  I   T L    K L L    L+++P+EI +   + +L L
Sbjct: 299 TSLTYLYLNENQLTSLPAE--IGQLTSL----KALGLNYNQLTSVPAEIGQLAALRELGL 352

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
             N +  +P E+     L+ L L  N++   P AI
Sbjct: 353 FENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAI 387



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 174/349 (49%), Gaps = 23/349 (6%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G L  L++L L  N++ S+P+ I    SL   ++  N L++LPAE+G+L 
Sbjct: 37  GLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLM 96

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L+ NQL     E  QL  L  L+L  N L+ +P EIG++T+LR+L L+GN L +
Sbjct: 97  SLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTS 156

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +           LL  LR  L  + +   S   E  I   T L V    L L    L+++
Sbjct: 157 I----------GLLSALRG-LGVSGNQRTSVPAE--IGQLTSLEV----LELHYNQLTSV 199

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI +   +  L+L  N +  LP  +    SL  L L  N++   P  I   L+SL  L
Sbjct: 200 PAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEI-GQLTSLERL 258

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  +P++    +  L+ L L  N + SLP       L  L  LYL   QL   P
Sbjct: 259 YLRHNQLTSLPAE-IGQLASLEWLYLEGNQLTSLPAG--IGQLTSLTYLYLNENQLTSLP 315

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I +L  L+ L L+ N L S+P     L +L EL L +N ++++P E+
Sbjct: 316 AEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEI 364



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 125/230 (54%), Gaps = 1/230 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++ N    +  ++  L  L VL + +N+L+ +PA IG+L  LK L++  N +  +
Sbjct: 163 LRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSL 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG  T+L       N+L  LP+ +G+  +L      +N +TSLP ++   + +  L 
Sbjct: 223 PAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLY 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT L    I   T LT L  ++N L  +P  IG L+ L  L L+ N++ S+P+ I
Sbjct: 283 LEGNQLTSLPAG-IGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
               +L E  +  N L+++PAE+G+L+ L  L+L  N+L        +LR
Sbjct: 342 GQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAIRELR 391


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 192/392 (48%), Gaps = 56/392 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++ L  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LTSLATLYLRFNRITTVEKDIKTLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           L+ +P  I     +T L L  N +  LP E+ 
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 216/454 (47%), Gaps = 48/454 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD++  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++   T L  L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L ++P G  +LT+LT L L +N ++ LP E+  +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 185/408 (45%), Gaps = 70/408 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LPE++  C++++ 
Sbjct: 206 TVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPETIGNLSSLSRLGLRYNRLSAIPK 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEA-CQLR------ 276
           S++ C  L E  + NN +S LP   L  L KL +L L  N  + Y V    Q        
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 277 -------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---R 314
                              LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              I    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHG------------IGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           EI    ++ KL L+ N +  LP  +    +L  L L  N +   P+ I
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 73/282 (25%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L  L +AHN +E L E++ +   +T L++ HN+L +LP  IG L  L  L + +N 
Sbjct: 236 ELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNR 295

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSL----------------------------- 133
           +  IP  +   + L + +  +N +  LP  L                             
Sbjct: 296 LSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFS 355

Query: 134 --------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
                                R   LS     +N +TSLP D    + M +L++  N+LT
Sbjct: 356 TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLT 415

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS------ 227
            +  + ++    L  LI S NLL  +P  IG+L +L  LDL +N++ S+P+ I+      
Sbjct: 416 KIPED-VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQ 474

Query: 228 -----------------GCCSLAEFYMGNNALSALPAELGKL 252
                               +L    +G N L+ LP E+GK+
Sbjct: 475 KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 181/372 (48%), Gaps = 15/372 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLK 391

Query: 404 SLQTLILSRNKI 415
           +LQTL L  N+ 
Sbjct: 392 NLQTLNLWNNQF 403



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 182/394 (46%), Gaps = 40/394 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT+L    I     L EL  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE-IGQLQNLQELYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L L+++++  +P  I    +L E  + +N L+ LP E+G+
Sbjct: 169 SYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L    L +NQL     E  +L+ L  L L +N L+ LP EIG++  L++ +L  N  
Sbjct: 229 LQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQF 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +  G    L                                  +EL L    L+
Sbjct: 289 TILPKEI--GQLQNL----------------------------------QELYLSYNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +  ++  L+L  N +  LP E+    +L+TL LS N++K  P  I   L +L 
Sbjct: 313 TFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEI-GQLQNLK 371

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
            L L NN L  +P +  + +  LQ L+L  N  S
Sbjct: 372 LLDLSNNQLTTLPKE-IEQLKNLQTLNLWNNQFS 404



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 174/354 (49%), Gaps = 19/354 (5%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKE--IGKLQKLQTLNLWNNQ 333

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEI 387



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 38/305 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  +    L+L N  L  +P E+              +  +LQ+L L++N +  L +++
Sbjct: 134 IRQLKNLQMLDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEI 180

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L +L++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL +    +N +T LP+++     + +  ++ N+ T+L         
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL--------- 291

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          P+ IG L  L  L L  N++ + P  I     L    + NN L+ 
Sbjct: 292 ---------------PKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+ +L  L TL+L  NQLK    E  QL+ L +LDLSNN L+ LP EI ++  L+ L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTL 396

Query: 304 LLTGN 308
            L  N
Sbjct: 397 NLWNN 401


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 153 LDLRHNKLREIPAVVYR-------------VSSLTTLYLRFNRITTVEKDIKNLSKLTML 199

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 200 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETI 259

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 260 GNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 319

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 320 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 377

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L +L LSNN L  LP  IG +  LR+L L  N
Sbjct: 378 GTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEEN 437

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 438 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 461

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +Q LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 462 LTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFE-LALCS 520

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 521 KLSIMSIENCPLSHLP 536



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 217/454 (47%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP  +G    L     S N +TSLP+ 
Sbjct: 84  LDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDS 143

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  +   ++   + LT L    N +  + + I +LS+L  L + 
Sbjct: 144 LDNLKKLRMLDLRHNKLREIPA-VVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIR 202

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N L +       L
Sbjct: 203 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNL 262

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             ++ L L  N LS +P  + K   L +L L  N +  L     SSLVN  +  L +   
Sbjct: 263 ASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCF 322

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 323 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 367

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ I   L SL  L L NN L+++P  G  +
Sbjct: 368 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDI-CGLVSLEMLTLSNNLLKKLPY-GIGN 425

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 426 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGEN 483

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            LQ +PE    L +L +L L+DN N+ +LP EL 
Sbjct: 484 LLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELA 517



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 339 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 398

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 399 DICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 457

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L + Y+ +N  L +LP EL 
Sbjct: 458 TNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELA 517

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 518 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 555

Query: 309 PLRTL 313
           P R +
Sbjct: 556 PYRAM 560



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 353 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 399

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 400 ICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 459

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 460 NQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALC 519

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 520 SKLSIMSIENCPLSHLPPQIVAG 542



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LPPE+   + L TL LS N +   
Sbjct: 81  SMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSL 140

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++P+  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 141 PDS-LDNLKKLRMLDLRHNKLREIPAVVYR-VSSLTTLYLRFNRITTVEKD-IKNLSKLT 197

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N+      
Sbjct: 198 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPE 257

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 258 TIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLS 307


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 10/290 (3%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA        A D++ L L HN ++ L +D+  L  L VL++  N+L+ LP  I
Sbjct: 31  TYDNLTEA-----LQNATDVRILSL-HNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEI 84

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L  L+++ N    IP+EIG    L +     NQLK LP  +G+  NL     SNN
Sbjct: 85  EQLQNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNN 144

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP ++     + KL +  N+LT+L    I     LT+L  + N L  +P  IG L 
Sbjct: 145 KLATLPNEIRKLQNLQKLYLSENQLTILPEE-IGKLKNLTKLDLNYNELTTLPNEIGKLQ 203

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++  +P  I     L   Y+  N    LP E+G+L KL  L L SNQLK 
Sbjct: 204 NLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQLKM 263

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           +  E  +L+ L  LDLS+N L+ LP EIG++  LRKL L   P   LRS 
Sbjct: 264 FPNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKLYLDDIP--ALRSQ 311



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 42/294 (14%)

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP ++GKL KL  LDL  NQL     E  QL+ L+ L+L+ N  + +P EIG +
Sbjct: 51  HNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYL 110

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L++L + GN L+TL                    P++            I     L V
Sbjct: 111 KNLQELHIGGNQLKTL--------------------PKD------------IGKLKNLQV 138

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               L L    L+ +P+EI +   + KL LS N +  LP E+    +L  L L+ N++  
Sbjct: 139 ----LHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYNELTT 194

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            P+ I   L +L  L L  N L  +P +  +++  L +L LSYN   +LP+      L  
Sbjct: 195 LPNEI-GKLQNLQELTLGYNQLTVLPKE-IRELQKLTVLYLSYNQFKTLPKE--IGELQK 250

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           L  LYLR  QL+  P +I +L++L  LDLS N L ++P+    L +L +L L D
Sbjct: 251 LTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKLYLDD 304



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 130/273 (47%), Gaps = 19/273 (6%)

Query: 270 VEACQLRLSVLDLS-NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            EA Q    V  LS +N L  LP +IGK+  LR L L GN L TL         P  ++ 
Sbjct: 36  TEALQNATDVRILSLHNKLKTLPKDIGKLKKLRVLDLRGNQLTTL---------PKEIEQ 86

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L++    N +    TT  + I     L    +EL + G  L  +P +I +   +  L LS
Sbjct: 87  LQNLTELNLNKNQFTTIPNEIGYLKNL----QELHIGGNQLKTLPKDIGKLKNLQVLHLS 142

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP E+    +LQ L LS N++   P+ I   L +L+ L L+ N L  +P++  K
Sbjct: 143 NNKLATLPNEIRKLQNLQKLYLSENQLTILPEEI-GKLKNLTKLDLNYNELTTLPNEIGK 201

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  LQ L L YN +  LP+      L  L  LYL   Q +  P +I  LQ+L +L L  
Sbjct: 202 -LQNLQELTLGYNQLTVLPKE--IRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRS 258

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N L+  P     L  L  LDLS N ++ LP E+
Sbjct: 259 NQLKMFPNEIGKLKELESLDLSHNQLTTLPKEI 291



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 6/203 (2%)

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +E   T  D +T A + +   + LSL    L  +P +I +  ++  LDL  N +  LP E
Sbjct: 25  AEDKRTTYDNLTEALQNATDVRILSLHN-KLKTLPKDIGKLKKLRVLDLRGNQLTTLPKE 83

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +    +L  L L++N+    P+ I   L +L  L +  N L+ +P D  K +  LQ+L L
Sbjct: 84  IEQLQNLTELNLNKNQFTTIPNEI-GYLKNLQELHIGGNQLKTLPKDIGK-LKNLQVLHL 141

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           S N +A+LP       L +LQ+LYL   QL   P +I +L+ L  LDL+ N L ++P   
Sbjct: 142 SNNKLATLPNE--IRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYNELTTLPNEI 199

Query: 518 KNLTSLTELDLSDNNISALPPEL 540
             L +L EL L  N ++ LP E+
Sbjct: 200 GKLQNLQELTLGYNQLTVLPKEI 222



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN  L  +PNE+ K               +LQKL L+ N +  L E++  L  LT L
Sbjct: 139 LHLSNNKLATLPNEIRK-------------LQNLQKLYLSENQLTILPEEIGKLKNLTKL 185

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L + +N +  +P EI     L     S NQ K LP  +
Sbjct: 186 DLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEI 245

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           G    L+     +N +   P ++    ++  LD+  N+LT L
Sbjct: 246 GELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTL 287


>gi|351713627|gb|EHB16546.1| Leucine-rich repeat-containing protein 40 [Heterocephalus glaber]
          Length = 488

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 224/475 (47%), Gaps = 59/475 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L +  N+L+ LP+AI EL  L+ L+VS N +  +P+E+ +   L       N+L  LP 
Sbjct: 31  LLKIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLPE 90

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  +L D   SNN +T++P   +  S + +L++  N+L  L    I+    L  L  
Sbjct: 91  GFEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAE-ISRMKKLKHLDC 149

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LG 250
           + NLL  +P     +  L  L L +N++  +P  +S C  L E ++G N +  L AE L 
Sbjct: 150 NSNLLETIPPEFAGMESLELLYLRRNKLRFLPEFLS-CRLLKELHVGENQIEMLGAEHLK 208

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            LS +  LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNP
Sbjct: 209 HLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGNLP-LKFLALEGNP 267

Query: 310 LRTLRSSLVNGPTPALLKYLRSRL----PENEDSEASTTKEDLITMATRLSVTS----KE 361
           LRT+R  ++N  T  +LKYLRS++    P + DS   TT   L +  +R++V +    K 
Sbjct: 268 LRTIRREIINKGTQEVLKYLRSKIKDDGPTHNDSAPDTTAMTLPS-ESRVNVHAIVALKL 326

Query: 362 LSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           L       + IP E+++A +   +T ++ S+N + E+P                      
Sbjct: 327 LDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKNQLCEIPKR-------------------- 366

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
                            NN L  +P D  K +  LQ ++LS+N    LPE      +P L
Sbjct: 367 -----------------NNFLNSLPED-MKSLIRLQTINLSFNRFKVLPE--VLYHIPTL 406

Query: 478 QELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           + + +   Q+    P  +  ++ L  LDL  N L  IP    N  SL  L L  N
Sbjct: 407 ESILISNNQVGSLDPQKMKMMENLMTLDLQNNDLLQIPPELGNCVSLRTLLLDGN 461



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 208/441 (47%), Gaps = 72/441 (16%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +LQKL ++HN ++ L E++ NL  L  L + HN+LS LP    +L  L+ LD+S N 
Sbjct: 48  ELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLPEGFEQLSSLEDLDLSNNL 107

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P    S ++L++ + SSNQLK LP+ + R   L     ++N + ++P + A    +
Sbjct: 108 LTAVPGSFSSLSSLMRLNLSSNQLKNLPAEISRMKKLKHLDCNSNLLETIPPEFAGMESL 167

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRILS 221
             L +  NKL  L   L  S  +L EL   +N +  +  E +  LS ++ LDL  N++ S
Sbjct: 168 ELLYLRRNKLRFLPEFL--SCRLLKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKS 225

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P  I+   SL    + NN +S+LP  LG L                             
Sbjct: 226 VPDEITLLQSLERLDLSNNDISSLPCSLGNLP---------------------------- 257

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL----PENE 337
                             L+ L L GNPLRT+R  ++N  T  +LKYLRS++    P + 
Sbjct: 258 ------------------LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPTHN 299

Query: 338 DSEASTTKEDLITMATRLSVTS----KELSLEGMNLSAIPSEIWEAGE---ITKLDLSRN 390
           DS   TT   L +  +R++V +    K L       + IP E+++A +   +T ++ S+N
Sbjct: 300 DSAPDTTAMTLPS-ESRVNVHAIVALKLLDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKN 358

Query: 391 SIQE----------LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            + E          LP ++ S   LQT+ LS N+ K  P+ +L  + +L  + + NN + 
Sbjct: 359 QLCEIPKRNNFLNSLPEDMKSLIRLQTINLSFNRFKVLPE-VLYHIPTLESILISNNQVG 417

Query: 441 QVPSDGFKDIPMLQILDLSYN 461
            +     K +  L  LDL  N
Sbjct: 418 SLDPQKMKMMENLMTLDLQNN 438



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 188/455 (41%), Gaps = 95/455 (20%)

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
            K  +N +TSLP  + +   + KL+V  NKL +L                        PE
Sbjct: 32  LKIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL------------------------PE 67

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            + +L  L  L L  N +  +P       SL +  + NN L+A+P     LS L  L+L 
Sbjct: 68  EVTNLKNLKGLYLQHNELSCLPEGFEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLS 127

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           SNQLK    E  ++ +L  LD ++N L  +PPE   M +L  L L  N LR L   L   
Sbjct: 128 SNQLKNLPAEISRMKKLKHLDCNSNLLETIPPEFAGMESLELLYLRRNKLRFLPEFL--- 184

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
            +  LLK L       E+       E L  +++ L      L L    L ++P EI    
Sbjct: 185 -SCRLLKELHV----GENQIEMLGAEHLKHLSSILV-----LDLRDNKLKSVPDEITLLQ 234

Query: 381 EITKLDLSRNSIQELP----------------------PELSSCASLQTLILSRNKIKD- 417
            + +LDLS N I  LP                       E+ +  + + L   R+KIKD 
Sbjct: 235 SLERLDLSNNDISSLPCSLGNLPLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 294

Query: 418 -------WPDAILTSLSSLS--------CLKLDNNPLRQ---VPSDGFKDIP--MLQILD 457
                   PD    +L S S         LKL +   +Q   +P + F  +   ++  ++
Sbjct: 295 GPTHNDSAPDTTAMTLPSESRVNVHAIVALKLLDYSDKQTTLIPDEVFDAVKSNVVTSVN 354

Query: 458 LSYN-----------IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            S N           + SLPE+    SL  LQ + L   + +  P  +  +  L  + +S
Sbjct: 355 FSKNQLCEIPKRNNFLNSLPED--MKSLIRLQTINLSFNRFKVLPEVLYHIPTLESILIS 412

Query: 507 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPEL 540
            N + S+ P+  K + +L  LDL +N++  +PPEL
Sbjct: 413 NNQVGSLDPQKMKMMENLMTLDLQNNDLLQIPPEL 447



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 57/322 (17%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 189 LKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 248

Query: 106 IPDEIGSATALVKF-----------------DCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +P  +G+    +KF                   +   LK L S +       +  A +  
Sbjct: 249 LPCSLGNLP--LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPTHNDSAPDTT 306

Query: 149 ITSLPED------------LADCSKMSKLDVEGNKLTVLSNNLIASWTM----LTELIAS 192
             +LP +            L D S      +       + +N++ S       L E+   
Sbjct: 307 AMTLPSESRVNVHAIVALKLLDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKNQLCEIPKR 366

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N LN +PE + SL RL  ++L  NR   +P  +    +L    + NN            
Sbjct: 367 NNFLNSLPEDMKSLIRLQTINLSFNRFKVLPEVLYHIPTLESILISNN------------ 414

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            ++G+LD    ++ E         L  LDL NN L  +PPE+G   +LR LLL GNP R 
Sbjct: 415 -QVGSLDPQKMKMME--------NLMTLDLQNNDLLQIPPELGNCVSLRTLLLDGNPFRV 465

Query: 313 LRSSLVNGPTPALLKYLRSRLP 334
            R++++   T A+L+YLR R+P
Sbjct: 466 PRAAILMKGTAAVLEYLRDRIP 487



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 167/422 (39%), Gaps = 86/422 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+++P E+ +                L+ L    N +E +  +   +  L +L
Sbjct: 124 LNLSSNQLKNLPAEISR-------------MKKLKHLDCNSNLLETIPPEFAGMESLELL 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP  +    +LK L V  N I M   + +   ++++  D   N+LK +P  
Sbjct: 171 YLRRNKLRFLPEFLS-CRLLKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKSVPDE 229

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + 
Sbjct: 230 ITLLQSLERLDLSNNDISSLPCSLGNLP-LKFLALEGNPLRTIRREIINKGTQEVLKYLR 288

Query: 192 SKNLLNG------MPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           SK   +G       P+T   +L    R+++H               +L      +   + 
Sbjct: 289 SKIKDDGPTHNDSAPDTTAMTLPSESRVNVH------------AIVALKLLDYSDKQTTL 336

Query: 245 LPAELGKLSK---LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +P E+    K   + +++   NQL E            +   NN L+ LP ++  +  L+
Sbjct: 337 IPDEVFDAVKSNVVTSVNFSKNQLCE------------IPKRNNFLNSLPEDMKSLIRLQ 384

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            + L+ N  + L   L + PT      L S L  N                         
Sbjct: 385 TINLSFNRFKVLPEVLYHIPT------LESILISNNQVG--------------------- 417

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
                   S  P ++     +  LDL  N + ++PPEL +C SL+TL+L  N  +    A
Sbjct: 418 --------SLDPQKMKMMENLMTLDLQNNDLLQIPPELGNCVSLRTLLLDGNPFRVPRAA 469

Query: 422 IL 423
           IL
Sbjct: 470 IL 471



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 14/113 (12%)

Query: 441 QVPSDGFK-----DIP-----MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
           Q P  GF+     DI      +L+I D    + SLP       L +LQ+L +   +L+  
Sbjct: 10  QGPRRGFRAERADDITAVPQGLLKIHD--NQLTSLPS--AIRELENLQKLNVSHNKLKIL 65

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P ++  L+ L+ L L  N L  +PEGF+ L+SL +LDLS+N ++A+P    S+
Sbjct: 66  PEEVTNLKNLKGLYLQHNELSCLPEGFEQLSSLEDLDLSNNLLTAVPGSFSSL 118


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 184/381 (48%), Gaps = 39/381 (10%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           KL E L+N   + VL ++  KL  LP  IG L  L+ L++  N +  IP EIG+   L K
Sbjct: 28  KLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQK 87

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D   N++  LP+ +G+  +L +   S N +T++P+++ +   +  L +  N+LT L   
Sbjct: 88  LDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTL--- 144

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ IG L  L  L L +N++ +IP  I    +L E Y+ 
Sbjct: 145 ---------------------PKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLM 183

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N L+ LP E+G+L  L  L L  NQL     E  +L+ L  L L+ N  + LP EIG +
Sbjct: 184 HNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNL 243

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L LT N L TL   + N     L K    RL  N+ +       +L  +      
Sbjct: 244 QNLQGLALTRNQLTTLPKEIGN-----LQKLQELRLDHNQLTTLPKEIGNLQNL------ 292

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             K+L+L    L+ IP EI     +  L+LS N +  LP E+ +  SL++L LS N +  
Sbjct: 293 --KDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTS 350

Query: 418 WPDAILTSLSSLSCLKLDNNP 438
           +P+ I   L  L  L+L+N P
Sbjct: 351 FPEEI-GKLQHLKRLRLENIP 370



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L  N I  L  ++  L  L  LN+S N+L+ +P  I EL  L++L + +N +  +
Sbjct: 85  LQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTL 144

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L +     NQL  +P  +G   NL +    +N +T+LP+++     + KL 
Sbjct: 145 PKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLI 204

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT L    I     L  L  + N    +P+ IG+L  L  L L +N++ ++P  I
Sbjct: 205 LDKNQLTTLPQE-IGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEI 263

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                L E  + +N L+ LP E+G L  L  L+L SNQL     E   L+ L  L+LS+N
Sbjct: 264 GNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSN 323

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L+ LP EI  + +L  L L+GNPL + 
Sbjct: 324 QLTALPKEIENLQSLESLDLSGNPLTSF 351



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 139/275 (50%), Gaps = 2/275 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  + +++ NL  L  L++  NK++ LP  IG+L  L+ L++SFN +  
Sbjct: 61  NLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTT 120

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EI     L       NQL  LP  +G+  NL +     N +T++P+++ +   + +L
Sbjct: 121 IPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKEL 180

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N LT L    +     L +LI  KN L  +P+ IG L  L  L L  N+  ++P  
Sbjct: 181 YLMHNNLTTLPKE-VGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKE 239

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G L KL  L L  NQL     E   L+ L  L+L +
Sbjct: 240 IGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRS 299

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N L+ +P EIG +  L  L L+ N L  L   + N
Sbjct: 300 NQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIEN 334



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 171/345 (49%), Gaps = 42/345 (12%)

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P+ IG+L  L  L+L +N++ +IP  I     L +  +G N ++ LP E+GKL  L  
Sbjct: 51  ALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQE 110

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L  NQL     E  +L+ L  L L  N L+ LP EIGK+  L++L L  N L T+   
Sbjct: 111 LNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQE 170

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           + N      L+ L                              KEL L   NL+ +P E+
Sbjct: 171 IGN------LQNL------------------------------KELYLMHNNLTTLPKEV 194

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
            +   + KL L +N +  LP E+    +L+ L L+ N+    P  I  +L +L  L L  
Sbjct: 195 GQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEI-GNLQNLQGLALTR 253

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L  +P +   ++  LQ L L +N + +LP+     +L +L++L LR  QL   P +I 
Sbjct: 254 NQLTTLPKE-IGNLQKLQELRLDHNQLTTLPKE--IGNLQNLKDLNLRSNQLTTIPQEIG 310

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            LQ L  L+LS N L ++P+  +NL SL  LDLS N +++ P E+
Sbjct: 311 NLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEI 355



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  + +++ NL  L  L + HN L+ LP  +G+L  L+ L +  N +  
Sbjct: 153 NLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTT 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     + NQ   LP  +G   NL     + N +T+LP+++ +  K+ +L
Sbjct: 213 LPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQEL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I +   L +L    N L  +P+ IG+L  L  L+L  N++ ++P  
Sbjct: 273 RLDHNQLTTLPKE-IGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKE 331

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I    SL    +  N L++ P E+GKL  L  L L +
Sbjct: 332 IENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLEN 368



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L HN +  L +++ NL  L  LN+  N+L+ +P  IG L  L+ L++S N +  +
Sbjct: 269 LQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTAL 328

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EI +  +L   D S N L   P  +G+  +L   +  N     +P  L    K+ KL
Sbjct: 329 PKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLEN-----IPTLLPQKEKIRKL 382



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL   +L   P +I  LQ L+ L+L +N L +IP+   NL  L +LDL  N I+ LP E
Sbjct: 42  LYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNE 101

Query: 540 L 540
           +
Sbjct: 102 I 102


>gi|296412416|ref|XP_002835920.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629717|emb|CAZ80077.1| unnamed protein product [Tuber melanosporum]
          Length = 968

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 261/573 (45%), Gaps = 64/573 (11%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFD---------EAGEGDKWWEAVDLQKLILAHN 55
           +K AR  G LN+SN  L ++P++VYK ++         E  +G KW+E+VDL + + A N
Sbjct: 385 IKTARVEGRLNISNLQLGEIPSDVYKMYETTEEDLASNETNDGPKWYESVDLVRFVGADN 444

Query: 56  NIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-DEIGSA 113
            +E + EDL +    L  +++ +N L+ LP   GEL  L  L+++ N +       I   
Sbjct: 445 EVEAISEDLVKQFGGLASIDMHNNLLTALPHNFGELTELTVLNLTNNKLGNGALGVICQI 504

Query: 114 TALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           ++LV    + N L+ EL  S+ R  +L   +   N + SLP  L   SK+  L++     
Sbjct: 505 SSLVDLKLAKNGLEGELDPSISRLTSLEILELQENRLESLPSSLGQLSKLHILNI----- 559

Query: 173 TVLSNNLIASWTMLT-------ELIASKNLLNG--MPETIGSLSRLIRLDLHQNRILSIP 223
              S+N+I S   ++       EL AS N L G   P  +  L  L  LD+  N I +  
Sbjct: 560 ---SHNIIQSIPFVSLLGCQLHELTASNNKLRGTLFPHGVTRLDSLHLLDIRNNHISNFS 616

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             +    SL + +  NN L + P+ +G   +L    + SN+L         L R+  +D+
Sbjct: 617 EDVVVLPSLQQLFATNNGLLSFPSVVG-WEELLVFLVDSNRLDALPDGLVGLHRVRTIDV 675

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S N++  L   +G M  L  L   GNPLR     L+      L + L+ RL   E   A 
Sbjct: 676 SANAIKTLDARVGIMEGLEVLKFDGNPLR--ERQLLGMSIADLKRTLKGRLAPPEIVIAE 733

Query: 343 TTKEDLITM-------ATRLSVTSK--------ELSLEGMNLSAIPSEIWEA--GEITKL 385
              +DL  +          +S  SK         L L   N   IP E+ +   G  + +
Sbjct: 734 VDDDDLTGVDGSFDSRPQAISENSKILEVGRGGALDLASKNYEDIPKELMDTVRGTPSSV 793

Query: 386 DLSRNSIQELPPELSSCA-SLQTLILSRNKIKD---WPDAILTSLSSLSCLKLDNNPLRQ 441
            L  N +   P  L   A  L +L + +NK+     +P+ +  SL+SL+ L +  N +  
Sbjct: 794 SLLHNRLTAFPSSLEIFALGLTSLNIGQNKLSGNSYFPNKM--SLTSLTTLIIQANNIAS 851

Query: 442 V-PSDGFKDIPMLQILDLSYNIASLPEN--PPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           + P     D P L  LD+S N  +  E   P F   PHL   Y R  Q+ E P D   + 
Sbjct: 852 LQPLIENLDAPKLDTLDVSANRLTSIEGIRPTF---PHLIAFYARDNQITEIPVD--SID 906

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
            ++ILDLS N++ S+P     L+S+ EL +  N
Sbjct: 907 GIKILDLSSNAITSLPPKLGTLSSIRELRVGGN 939



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 137/323 (42%), Gaps = 62/323 (19%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL--VKFDCSSNQLK 127
           L V  V  N+L  LP  +  LH ++++DVS N+I  +   +G    L  +KFD   N L+
Sbjct: 647 LLVFLVDSNRLDALPDGLVGLHRVRTIDVSANAIKTLDARVGIMEGLEVLKFD--GNPLR 704

Query: 128 ELP------SSLGRCL--------------NLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           E        + L R L              +  D    +    S P+ +++ SK+ ++  
Sbjct: 705 ERQLLGMSIADLKRTLKGRLAPPEIVIAEVDDDDLTGVDGSFDSRPQAISENSKILEVGR 764

Query: 168 EG-------------------------------NKLTVLSNNLIASWTMLTELIASKNLL 196
            G                               N+LT   ++L      LT L   +N L
Sbjct: 765 GGALDLASKNYEDIPKELMDTVRGTPSSVSLLHNRLTAFPSSLEIFALGLTSLNIGQNKL 824

Query: 197 NG---MPETIGSLSRLIRLDLHQNRILSIPSSISG--CCSLAEFYMGNNALSALPAELGK 251
           +G    P  + SL+ L  L +  N I S+   I       L    +  N L+++      
Sbjct: 825 SGNSYFPNKM-SLTSLTTLIIQANNIASLQPLIENLDAPKLDTLDVSANRLTSIEGIRPT 883

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
              L       NQ+ E  V++    + +LDLS+N+++ LPP++G ++++R+L + GN  +
Sbjct: 884 FPHLIAFYARDNQITEIPVDSID-GIKILDLSSNAITSLPPKLGTLSSIRELRVGGNLFK 942

Query: 312 TLRSSLVNGPTPALLKYLRSRLP 334
             R  ++   T +++++LR RLP
Sbjct: 943 VPRWQVLEKGTESVMEWLRGRLP 965



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 56/270 (20%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR-------SSLVNGPTPALLKYL 329
           L+ +D+ NN L+ LP   G++T L  L LT N L           SSLV+      LK  
Sbjct: 460 LASIDMHNNLLTALPHNFGELTELTVLNLTNNKLGNGALGVICQISSLVD------LKLA 513

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++ L    D          I+  T L +    L L+   L ++PS + +  ++  L++S 
Sbjct: 514 KNGLEGELDPS--------ISRLTSLEI----LELQENRLESLPSSLGQLSKLHILNISH 561

Query: 390 NSIQELP-PELSSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           N IQ +P   L  C  L  L  S NK++   +P  + T L SL  L + NN         
Sbjct: 562 NIIQSIPFVSLLGC-QLHELTASNNKLRGTLFPHGV-TRLDSLHLLDIRNN--------- 610

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                   I + S ++  LP          LQ+L+     L   P+ ++  ++L +  + 
Sbjct: 611 -------HISNFSEDVVVLPS---------LQQLFATNNGLLSFPS-VVGWEELLVFLVD 653

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N L ++P+G   L  +  +D+S N I  L
Sbjct: 654 SNRLDALPDGLVGLHRVRTIDVSANAIKTL 683



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 171/436 (39%), Gaps = 84/436 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHN-------------KLSEL---------- 83
           L+ L L  N +E L   L  L  L +LN+SHN             +L EL          
Sbjct: 531 LEILELQENRLESLPSSLGQLSKLHILNISHNIIQSIPFVSLLGCQLHELTASNNKLRGT 590

Query: 84  --PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
             P  +  L  L  LD+  N I    +++    +L +   ++N L   PS +G    L  
Sbjct: 591 LFPHGVTRLDSLHLLDIRNNHISNFSEDVVVLPSLQQLFATNNGLLSFPSVVG-WEELLV 649

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN---- 197
           F   +N + +LP+ L    ++  +DV  N +  L +  +     L  L    N L     
Sbjct: 650 FLVDSNRLDALPDGLVGLHRVRTIDVSANAIKTL-DARVGIMEGLEVLKFDGNPLRERQL 708

Query: 198 -GMPETIGSLSRLIRLDLHQNRIL-----------------SIPSSISGCCSLAEFYMGN 239
            GM  +I  L R ++  L    I+                 S P +IS    + E   G 
Sbjct: 709 LGM--SIADLKRTLKGRLAPPEIVIAEVDDDDLTGVDGSFDSRPQAISENSKILEVGRGG 766

Query: 240 ------NALSALPAELGKLSKLGT---LDLHSNQLKEY--CVEACQLRLSVLDLSNNSLS 288
                      +P EL    + GT   + L  N+L  +   +E   L L+ L++  N LS
Sbjct: 767 ALDLASKNYEDIPKELMDTVR-GTPSSVSLLHNRLTAFPSSLEIFALGLTSLNIGQNKLS 825

Query: 289 G--LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL--LKYLRSRLPENEDSEASTT 344
           G    P    +T+L  L++  N + +L+  + N   P L  L    +RL   E      T
Sbjct: 826 GNSYFPNKMSLTSLTTLIIQANNIASLQPLIENLDAPKLDTLDVSANRLTSIEGIRP--T 883

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              LI    R +            ++ IP +  +  +I  LDLS N+I  LPP+L + +S
Sbjct: 884 FPHLIAFYARDN-----------QITEIPVDSIDGIKI--LDLSSNAITSLPPKLGTLSS 930

Query: 405 LQTLILSRN--KIKDW 418
           ++ L +  N  K+  W
Sbjct: 931 IRELRVGGNLFKVPRW 946



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 11/172 (6%)

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           + + G +  +D+  N +  LP        L  L L+ NK+ +    ++  +SSL  LKL 
Sbjct: 454 VKQFGGLASIDMHNNLLTALPHNFGELTELTVLNLTNNKLGNGALGVICQISSLVDLKLA 513

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ---LREAP 491
            N L          +  L+IL+L  N + SLP     SSL  L +L++  +    ++  P
Sbjct: 514 KNGLEGELDPSISRLTSLEILELQENRLESLP-----SSLGQLSKLHILNISHNIIQSIP 568

Query: 492 TDILRLQQLRILDLSQNSLQS--IPEGFKNLTSLTELDLSDNNISALPPELV 541
              L   QL  L  S N L+    P G   L SL  LD+ +N+IS    ++V
Sbjct: 569 FVSLLGCQLHELTASNNKLRGTLFPHGVTRLDSLHLLDIRNNHISNFSEDVV 620


>gi|391343057|ref|XP_003745831.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Metaseiulus
           occidentalis]
          Length = 516

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 200/412 (48%), Gaps = 40/412 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N I ++  ++  L  LT+L++  NK+  LPA IG L  L +LD S N ++ +
Sbjct: 130 LTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDASNNHMLHL 189

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D   N+L ++P +LG   +L       N +TS+P+  A C+ M + +
Sbjct: 190 PPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSFAACALMQEFN 249

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILSIPSS 225
           VE N ++ L + L++S+T +T L  S+N     P    G  + +  ++   N I  IP  
Sbjct: 250 VESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSINFEHNHISKIPFG 309

Query: 226 I-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           + S   +L++  M +N LSALP ++G  + +  L+L +NQL +   +   L  L VL LS
Sbjct: 310 MFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEVLVLS 369

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  LP  IG ++ LR L L  N L  L         P  + +L              
Sbjct: 370 NNILRRLPGSIGGLSKLRVLDLEENKLEQL---------PNEIGFL-------------- 406

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              DL           ++L ++   L  +P  I     +T L++  N++Q +P E+ +  
Sbjct: 407 --HDL-----------QKLMVQNNLLQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGTME 453

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           +L++L L+ N +   P   L   S+L  + ++N PL Q+P++     P L I
Sbjct: 454 ALESLYLNDNPLHALPFE-LALCSNLQIMSIENCPLSQMPAEIVIGGPSLVI 504



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 208/470 (44%), Gaps = 98/470 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L VL++ HNK +E+P  I  L  L +L + FN I 
Sbjct: 82  VNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIR 141

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++ +EI   + L       N+++ LP+ +G    L    ASNN +  LP ++  C  +S 
Sbjct: 142 EVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLST 201

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LDV+ N+L                          +PET+G+L  L+RL L  N++ S+P 
Sbjct: 202 LDVQHNELI------------------------DVPETLGNLKSLVRLGLRYNQLTSVPK 237

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEA-CQL------- 275
           S + C  + EF + +N +SALP   L   +++ +L L  NQ   Y V    Q        
Sbjct: 238 SFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSIN 297

Query: 276 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                              LS L++ +N LS LP +IG  T + +L L  N L  +    
Sbjct: 298 FEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATNQLVKI---- 353

Query: 318 VNGPTPALLKYLRS------------RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
                P  ++YL S            RLP +            I   ++L V    L LE
Sbjct: 354 -----PDDIQYLHSLEVLVLSNNILRRLPGS------------IGGLSKLRV----LDLE 392

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L  +P+EI    ++ KL +  N +Q LP  +    SL  L +  N ++  P+ I T 
Sbjct: 393 ENKLEQLPNEIGFLHDLQKLMVQNNLLQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGT- 451

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           + +L  L L++NPL  +P +       LQI+ +        EN P S +P
Sbjct: 452 MEALESLYLNDNPLHALPFE-LALCSNLQIMSI--------ENCPLSQMP 492



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 219/474 (46%), Gaps = 44/474 (9%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + ++ LPA + +L  L  L +  N +  +P+EIG    L     S N L  LP
Sbjct: 39  TRLDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLP 98

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SL     L      +N  T +P  +     ++ L +  N++  +SN  IA  + LT L 
Sbjct: 99  DSLTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNE-IAQLSNLTMLS 157

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L +L+ LD   N +L +P  I  C +L+   + +N L  +P  LG
Sbjct: 158 LRENKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLG 217

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTG 307
            L  L  L L  NQL        AC L +   ++ +N++S LP   +   T +  L L+ 
Sbjct: 218 NLKSLVRLGLRYNQLTSVPKSFAACAL-MQEFNVESNNISALPDGLLSSFTQMTSLTLSR 276

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N      S  V GP     ++        E +  S     + + A  LS    +L+++  
Sbjct: 277 N---QFTSYPVGGPG----QFTSVHSINFEHNHISKIPFGMFSRAKNLS----KLNMKDN 325

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            LSA+P +I     + +L+L+ N + ++P ++    SL+ L+LS N ++  P +I   LS
Sbjct: 326 QLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEVLVLSNNILRRLPGSI-GGLS 384

Query: 428 SLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
            L  L L+ N L Q+P++ GF                          L  LQ+L ++   
Sbjct: 385 KLRVLDLEENKLEQLPNEIGF--------------------------LHDLQKLMVQNNL 418

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+  P  I  L  L  L++ +N++Q IPE    + +L  L L+DN + ALP EL
Sbjct: 419 LQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNPLHALPFEL 472



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 171/404 (42%), Gaps = 87/404 (21%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ++   R+  +L L    +R+V NE+              +  +L  L L  N I  L   
Sbjct: 123 VIYTLRSLTTLFLRFNRIREVSNEI-------------AQLSNLTMLSLRENKIRMLPAG 169

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L+ S+N +  LP  IG+   L +LDV  N ++ +P+ +G+  +LV+     
Sbjct: 170 IGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRY 229

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDL--------------------------- 156
           NQL  +P S   C  + +F   +N I++LP+ L                           
Sbjct: 230 NQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQ 289

Query: 157 ----------------------ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL----- 189
                                 +    +SKL+++ N+L+ L  + I +WT + EL     
Sbjct: 290 FTSVHSINFEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLD-IGTWTNMVELNLATN 348

Query: 190 ------------------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                             + S N+L  +P +IG LS+L  LDL +N++  +P+ I     
Sbjct: 349 QLVKIPDDIQYLHSLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEIGFLHD 408

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + NN L  LP  +G L+ L  L++  N ++    E   +  L  L L++N L  L
Sbjct: 409 LQKLMVQNNLLQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNPLHAL 468

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           P E+   + L+ + +   PL  + + +V G    +++YL+ + P
Sbjct: 469 PFELALCSNLQIMSIENCPLSQMPAEIVIGGPSLVIQYLKMKGP 512



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 176/415 (42%), Gaps = 53/415 (12%)

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           TS+  DL    ++++   EGN                T L  S++ +  +P  +  L+ L
Sbjct: 18  TSIQADLDVAKELTRCRDEGN----------------TRLDLSRSNITALPANVKDLTHL 61

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + L L+ N++ ++P+ I G  +LA   +  N+L+ LP  L  L +L  LDL  N+  E  
Sbjct: 62  VELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIP 121

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                LR L+ L L  N +  +  EI +++ L  L L  N +R L         PA +  
Sbjct: 122 PVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRML---------PAGIGL 172

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L   +  +  +         I     LS     L ++   L  +P  +     + +L L 
Sbjct: 173 LEQLVTLDASNNHMLHLPPEIGKCKNLST----LDVQHNELIDVPETLGNLKSLVRLGLR 228

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  +P   ++CA +Q   +  N I   PD +L+S + ++ L L  N     P  G  
Sbjct: 229 YNQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPG 288

Query: 449 DIPMLQILDLSYN-IASLP---------------ENPPFSSLP-------HLQELYLRRM 485
               +  ++  +N I+ +P               ++   S+LP       ++ EL L   
Sbjct: 289 QFTSVHSINFEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATN 348

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           QL + P DI  L  L +L LS N L+ +P     L+ L  LDL +N +  LP E+
Sbjct: 349 QLVKIPDDIQYLHSLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEI 403



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 41/264 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS ++++ LP  +  +T L +L L GN L TL + +                      
Sbjct: 41  LDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEI---------------------- 78

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                   L+ +AT        L+L   +L+ +P  +    ++  LDL  N   E+PP +
Sbjct: 79  ------GGLVNLAT--------LALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIPPVI 124

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
            +  SL TL L  N+I++  + I   LS+L+ L L  N +R +P+ G   +  L  LD S
Sbjct: 125 YTLRSLTTLFLRFNRIREVSNEI-AQLSNLTMLSLRENKIRMLPA-GIGLLEQLVTLDAS 182

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N +  LP  P      +L  L ++  +L + P  +  L+ L  L L  N L S+P+ F 
Sbjct: 183 NNHMLHLP--PEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSFA 240

Query: 519 NLTSLTELDLSDNNISALPPELVS 542
               + E ++  NNISALP  L+S
Sbjct: 241 ACALMQEFNVESNNISALPDGLLS 264



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 456 LDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDLS  NI +LP N     L HL ELYL   +L   P +I  L  L  L LS+NSL  +P
Sbjct: 41  LDLSRSNITALPAN--VKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLP 98

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
           +   NL  L  LDL  N  + +PP + ++
Sbjct: 99  DSLTNLKQLRVLDLRHNKFTEIPPVIYTL 127


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 197/403 (48%), Gaps = 45/403 (11%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK------EDLRNLPLLTVLNVSHNKL 80
           E+ + + EA   + W E V L+   +    +E +        +L  L  L  LN+  N+L
Sbjct: 4   ELQERWPEASPAEHW-EGVTLENGRVVELELEDVGLTGAVPAELGRLSALRKLNLGRNQL 62

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           + +PA IG+L  L+ L +  N +  +P EIG  T+L      SNQL  +P+ +G+  +L 
Sbjct: 63  TSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTSVPAEIGQLASLE 122

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
            F  S N +TSLP ++   + +  L +  N+LT +    I   T L  L  ++N L  +P
Sbjct: 123 VFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE-IWQITALEALWLNENQLTSLP 181

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L+ L  L L  N++ S+P+ I     L    + +N L+++PAE+G+L+ L  L L
Sbjct: 182 AEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHL 241

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQL     E  QL  L  L+L +N L+ +P EIG++ +L++L+L+ N L ++      
Sbjct: 242 QGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSV------ 295

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              PA +  L S                              L+LE   L+++P+EI + 
Sbjct: 296 ---PAEIGQLSSL---------------------------DGLNLERNQLTSVPAEIGQL 325

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
             +  L LS N +  +P E+   ASL+ L L+ N++   P AI
Sbjct: 326 ASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAI 368



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 183/371 (49%), Gaps = 41/371 (11%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++P +L   S + KL++  N+LT +    I   T L EL   +N L  +P  IG L+ L 
Sbjct: 41  AVPAELGRLSALRKLNLGRNQLTSVPAE-IGQLTSLEELRLDRNQLTSVPAEIGQLTSLE 99

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L L  N++ S+P+ I    SL  FY+  N L++LPAE+G+L+ L  L L  NQL     
Sbjct: 100 VLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPA 159

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  Q+  L  L L+ N L+ LP EIG++T+L++L L GN L ++         PA +  L
Sbjct: 160 EIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSV---------PADIGQL 210

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                 + DS   T+    I     L    K L L+G  L+++P+EI +   +  L+L  
Sbjct: 211 TLLEGLSLDSNQLTSVPAEIGQLASL----KFLHLQGNQLASVPAEIGQLTLLEGLNLES 266

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  +P E+   ASL+ LILSRN++   P  I   LSSL  L L+ N L  VP++    
Sbjct: 267 NQLTSVPAEIGQLASLKRLILSRNQLTSVPAEI-GQLSSLDGLNLERNQLTSVPAE-IGQ 324

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L++L LSYN                        QL   P +I +L  L  L L+ N 
Sbjct: 325 LASLKLLHLSYN------------------------QLTSVPAEIWQLASLEWLWLNNNE 360

Query: 510 LQSIPEGFKNL 520
           L S+P   + L
Sbjct: 361 LTSVPAAIREL 371



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 11/286 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N +  +  ++  L  L V  +S N+L+ LPA IG+L +L+ L ++ N +  +
Sbjct: 98  LEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSV 157

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   TAL     + NQL  LP+ +G+  +L +     N +TS+P D+   + +  L 
Sbjct: 158 PAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLS 217

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT +    I     L  L    N L  +P  IG L+ L  L+L  N++ S+P+ I
Sbjct: 218 LDSNQLTSVPAE-IGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEI 276

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL    +  N L+++PAE+G+LS L  L+L  NQL     E  QL  L +L LS N
Sbjct: 277 GQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYN 336

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L+ +P EI ++ +L  L L  N L ++         PA ++ LR+
Sbjct: 337 QLTSVPAEIWQLASLEWLWLNNNELTSV---------PAAIRELRA 373



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 168/350 (48%), Gaps = 44/350 (12%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G LS L +L+L +N++ S+P+ I    SL E  +  N L+++PAE+G+L+
Sbjct: 37  GLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLT 96

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L SNQL     E  QL  L V  LS N L+ LP EIG++T L  L L  N L +
Sbjct: 97  SLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTS 156

Query: 313 LRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +         PA +  + +   L  NE+   S   E  I   T L    KEL L G  L+
Sbjct: 157 V---------PAEIWQITALEALWLNENQLTSLPAE--IGQLTSL----KELGLGGNQLT 201

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           ++P++I +   +  L L  N +  +P E+   ASL+ L L  N++   P  I   L+ L 
Sbjct: 202 SVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEI-GQLTLLE 260

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L++N L  VP++                            L  L+ L L R QL   
Sbjct: 261 GLNLESNQLTSVPAE-------------------------IGQLASLKRLILSRNQLTSV 295

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +L  L  L+L +N L S+P     L SL  L LS N ++++P E+
Sbjct: 296 PAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEI 345



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 24/210 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  D+  L LL  L++  N+L+ +PA IG+L  LK L +  N +  +
Sbjct: 190 LKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASV 249

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T L   +  SNQL  +P+ +G+  +L     S N +TS+P ++   S +  L+
Sbjct: 250 PAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLN 309

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+LT                         +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 310 LERNQLT------------------------SVPAEIGQLASLKLLHLSYNQLTSVPAEI 345

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLG 256
               SL   ++ NN L+++PA + +L   G
Sbjct: 346 WQLASLEWLWLNNNELTSVPAAIRELRAAG 375



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 6/182 (3%)

Query: 361 ELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           EL LE + L+ A+P+E+     + KL+L RN +  +P E+    SL+ L L RN++   P
Sbjct: 30  ELELEDVGLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVP 89

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L+SL  L L++N L  VP++    +  L++  LS N + SLP       L  L+
Sbjct: 90  AEI-GQLTSLEVLYLESNQLTSVPAE-IGQLASLEVFYLSRNQLTSLPAE--IGQLTLLE 145

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L R QL   P +I ++  L  L L++N L S+P     LTSL EL L  N ++++P 
Sbjct: 146 GLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPA 205

Query: 539 EL 540
           ++
Sbjct: 206 DI 207


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 46/310 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++ NL  L  L++  NK++ LP  IG+L  L+ L++SFN +  
Sbjct: 61  NLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLAT 120

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +     NQ   LP  +G+  NL + ++S N +T+LP+++ +   + +L
Sbjct: 121 LPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQEL 180

Query: 166 DVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETI 203
            +  N+LT L                 N L      I +   L +L+ ++N L  +P  I
Sbjct: 181 YLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEI 240

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L  L  L+L +N++ ++P  I    +L   ++GNN L+ALP E+G L KL  L L+ N
Sbjct: 241 GNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKN 300

Query: 264 Q-------------LKEYCVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTT 299
           Q             LKE  + + QL           +L  LDL NN L+ LP EIG +  
Sbjct: 301 QLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQN 360

Query: 300 LRKLLLTGNP 309
           L++L L GNP
Sbjct: 361 LQRLYLGGNP 370



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 178/358 (49%), Gaps = 19/358 (5%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           KL E L+N   + VL ++  KL+ LP  IG+L  L+ L++  N +  +P EIG+   L K
Sbjct: 28  KLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQK 87

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D   N++  LP  +G+  +L +   S N + +LP+++ +   + +L +  N+ T L   
Sbjct: 88  LDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEE 147

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L E+ +SKN L  +P+ IG+L  L  L L++N++ ++P  I    +L +  + 
Sbjct: 148 -IGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLN 206

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L+ALP E+G L  L  L L+ NQL    +E   L+ L  L+L  N L+ LP EI K+
Sbjct: 207 RNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKL 266

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L  L   + N      LK+L               K  L T+   +  
Sbjct: 267 QNLQGLHLGNNKLTALPIEIGNLQK---LKWL------------GLNKNQLTTIPKEIGN 311

Query: 358 TS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
               KEL+L    L+ IP EI    ++  LDL  N +  LP E+ +  +LQ L L  N
Sbjct: 312 LQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGN 369



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 42/347 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG L  L  L+L +N++ ++P  I     L +  +G N ++ LP E+G+L  L
Sbjct: 49  LTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSL 108

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L  NQL     E   L+ L  L L  N  + LP EIGK+  L+++  + N L TL 
Sbjct: 109 QELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLP 168

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             + N      L+ L+                              EL L    L+A+P 
Sbjct: 169 KEIGN------LQNLQ------------------------------ELYLNENQLTALPI 192

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI     + KL L+RN +  LP E+ +  +LQ L+L+RN++   P  I  +L +L  L L
Sbjct: 193 EIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEI-GNLQNLQGLNL 251

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           D N L  +P +  + +  LQ L L  N + +LP      +L  L+ L L + QL   P +
Sbjct: 252 DKNQLTTLPKE-IRKLQNLQGLHLGNNKLTALP--IEIGNLQKLKWLGLNKNQLTTIPKE 308

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  LQ L+ L+LS N L +IP+  +NL  L  LDL +N ++ LP E+
Sbjct: 309 IGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEI 355



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 166/359 (46%), Gaps = 16/359 (4%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           S+L  A+     ++ L ++   +  +P+EIG    L + +   N+L  LP  +G    L 
Sbjct: 27  SKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQ 86

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                 N IT LP+++     + +L++  N+L  L    I +   L  L    N    +P
Sbjct: 87  KLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKE-IGNLQHLKRLFLGLNQFTALP 145

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E IG L  L  ++  +N++ ++P  I    +L E Y+  N L+ALP E+G L  L  L L
Sbjct: 146 EEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVL 205

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + NQL    +E   L+ L  L L+ N L+ LP EIG +  L+ L L  N L TL      
Sbjct: 206 NRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTL------ 259

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              P  ++ L++    +  +   T     I    +L    K L L    L+ IP EI   
Sbjct: 260 ---PKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKL----KWLGLNKNQLTTIPKEIGNL 312

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             + +L+LS N +  +P E+ +   L+TL L  N++   P  I  +L +L  L L  NP
Sbjct: 313 QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEI-GNLQNLQRLYLGGNP 370



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 32/204 (15%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D+E  +   + +   T++ V    L L G  L+A+P EI +   + +L+L  N +  LP 
Sbjct: 22  DAEDYSKLNEALQNPTQVRV----LYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQ 77

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+ +   LQ L L  NKI   P  I                           +  LQ L+
Sbjct: 78  EIGNLQYLQKLDLGFNKITVLPKEI-------------------------GQLQSLQELN 112

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           LS+N +A+LP+     +L HL+ L+L   Q    P +I +LQ L+ ++ S+N L ++P+ 
Sbjct: 113 LSFNQLATLPK--EIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKE 170

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             NL +L EL L++N ++ALP E+
Sbjct: 171 IGNLQNLQELYLNENQLTALPIEI 194


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 192/399 (48%), Gaps = 22/399 (5%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +TS+PE++ D + +  LDV  N LT +    I     L  L A  N+L  +P+ IG
Sbjct: 21  SNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPE-AIGRLQKLYRLDAYSNMLTRLPQAIG 79

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           SL +L  L ++ N++  +PS +    +L    +GNN LS  P  + KL KL  L ++ NQ
Sbjct: 80  SLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQ 139

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L E     C L  L VL +SNN+LS  PP + K+  LR+L + GN L  + S + + P  
Sbjct: 140 LTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNL 199

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
            +L      +  N  S      E L  +        +EL + G  L+ +PS +     + 
Sbjct: 200 EVLG-----VSNNNLSTFPPGVEKLQKL--------RELYIYGNQLTEVPSGVCSLPNLE 246

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L +S N +   PP +     L+ L +  N++ + P  +  SL  L  L + NNP+R++P
Sbjct: 247 VLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGV-CSLPDLEWLSVGNNPIRRLP 305

Query: 444 SD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
                 K +  L   D  +++  +P+     +L HL  L L    L+  P+ +  L  LR
Sbjct: 306 RQVLQLKTLEKLYAGDCKFDM--VPDE--VGNLQHLWFLALEYNLLKTLPSTMRHLHNLR 361

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            + L  N   + PE    L ++ +L + +NNI+ LP  L
Sbjct: 362 EVRLWSNKFDTFPEVLCELPAMEKLVIRNNNITRLPTAL 400



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 185/410 (45%), Gaps = 19/410 (4%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L++  +  + E++ ++  L  L+VS N L+ +P AIG L  L  LD   N + ++P  
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNMLTRLPQA 77

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IGS   L       NQL E+PS +    NL      NN +++ P  +    K+ +L + G
Sbjct: 78  IGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYING 137

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT + +  + S   L  L  S N L+  P  +  L +L  L ++ N++  +PS +   
Sbjct: 138 NQLTEVPSG-VCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 196

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
            +L    + NN LS  P  + KL KL  L ++ NQL E     C L  L VL +SNN LS
Sbjct: 197 PNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLS 256

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPEN------ 336
             PP + K+  LR+L +  N L  + + + + P    L++L        RLP        
Sbjct: 257 TFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPD---LEWLSVGNNPIRRLPRQVLQLKT 313

Query: 337 -EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            E   A   K D++            L+LE   L  +PS +     + ++ L  N     
Sbjct: 314 LEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSNKFDTF 373

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           P  L    +++ L++  N I   P A L     L  L +  NPL   P D
Sbjct: 374 PEVLCELPAMEKLVIRNNNITRLPTA-LHRADKLKDLDVSGNPLTYPPQD 422



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 159/370 (42%), Gaps = 68/370 (18%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN +P+T+  L   + LDL    + SIP  +     L +  + +N L+++P  +G+L KL
Sbjct: 5   LNLLPQTVNGL---LTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKL 61

Query: 256 GTLDLHS-----------------------NQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
             LD +S                       NQL E     C L  L VL + NN LS  P
Sbjct: 62  YRLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFP 121

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
           P + K+  LR+L + GN L  + S + + P                              
Sbjct: 122 PGVEKLQKLRELYINGNQLTEVPSGVCSLPN----------------------------- 152

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
              L V    L +   NLS  P  + +  ++ +L +  N + E+P  + S  +L+ L +S
Sbjct: 153 ---LEV----LGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVS 205

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
            N +  +P  +   L  L  L +  N L +VPS G   +P L++L +S N +++ P  P 
Sbjct: 206 NNNLSTFPPGV-EKLQKLRELYIYGNQLTEVPS-GVCSLPNLEVLSVSNNKLSTFP--PG 261

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
              L  L+ELY+   QL E PT +  L  L  L +  N ++ +P     L +L +L   D
Sbjct: 262 VEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGD 321

Query: 531 NNISALPPEL 540
                +P E+
Sbjct: 322 CKFDMVPDEV 331



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 31/338 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N + ++   + +LP L VL VS+N LS  P  + +L  L+ L +  N + ++
Sbjct: 130 LRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEV 189

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  + S   L     S+N L   P  + +   L +     N +T +P  +     +  L 
Sbjct: 190 PSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLS 249

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL+      +     L EL    N L  +P  + SL  L  L +  N I  +P  +
Sbjct: 250 VSNNKLSTFPPG-VEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQV 308

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH-----------------------SN 263
               +L + Y G+     +P E+G L  L  L L                        SN
Sbjct: 309 LQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSN 368

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +   +    C+L  +  L + NN+++ LP  + +   L+ L ++GNPL      +    T
Sbjct: 369 KFDTFPEVLCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGT 428

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            A++ +L+      +++E ++ K D++  A    +  K
Sbjct: 429 GAIMAFLK------QEAEKTSRKSDIMEAAAETELERK 460


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 186/384 (48%), Gaps = 45/384 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA        A D++ L L HNN E L +++  L  LT L +S+N+L  LP  I
Sbjct: 30  TYHNLTEA-----LRNATDVRILSL-HNN-ETLPKEIGELQNLTKLYLSNNQLQALPKEI 82

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L ++ N +  IP+EIG    L      +NQL+ LP  +G+   L     ++N
Sbjct: 83  GKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDN 142

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++    K+ +LD   N LT L    I     L ELI S N L  +P+ IG L 
Sbjct: 143 QLKTLPKEIEYLQKLRELDSTNNPLTTLPKE-IGYLKNLEELILSNNELTTLPKEIGKLK 201

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  + + ++P+ I    +L + Y+    L+ LP ++G L  L  L L  NQLK 
Sbjct: 202 NLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKT 261

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              +  +L+ L VL LS N L+ LP E GK+ +LR+L L+GN L TL         P   
Sbjct: 262 LPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTL---------PKEF 312

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L+S                            +EL+L G  L+ +P EI +   + +L+
Sbjct: 313 GKLQSL---------------------------RELNLSGNQLTTLPKEIGKLQSLRELN 345

Query: 387 LSRNSIQELPPELSSCASLQTLIL 410
           LS N +  LP E+    +LQ L L
Sbjct: 346 LSGNQLTTLPKEIGHLKNLQELYL 369



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 172/333 (51%), Gaps = 25/333 (7%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L LH N   ++P  I    +L + Y+ NN L ALP E+GKL KL  L L++NQL     E
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNE 104

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L VL L NN L  LP EIGK+  L+ L L  N L+TL         P  ++YL+
Sbjct: 105 IGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTL---------PKEIEYLQ 155

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                    E  +T   L T+   +      +EL L    L+ +P EI +   +  L L 
Sbjct: 156 KL------RELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLG 209

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            + +  LP ++    +LQ L L+  ++   P+ I   L +L  L L +N L+ +P+D  K
Sbjct: 210 ADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDI-GYLKNLQELYLSDNQLKTLPNDIGK 268

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  LQ+L LS N + +LP+   F  L  L+EL L   QL   P +  +LQ LR L+LS 
Sbjct: 269 -LKNLQVLHLSGNQLTTLPKE--FGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSG 325

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N L ++P+    L SL EL+LS N ++ LP E+
Sbjct: 326 NQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEI 358


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 147/269 (54%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL       N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ NKLT+L    I     L  L +  N L   P+ IG LS+L +L L+ N++ ++P  
Sbjct: 192 NLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  L+L  
Sbjct: 251 IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGF 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG++  L++L L  N L TL
Sbjct: 311 NQLTTLPQEIGQLQNLQELNLEFNQLATL 339



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 167/369 (45%), Gaps = 62/369 (16%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L  N++  +P  I    +L    +  N L+ LP ++G+
Sbjct: 156 --------PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+   NQL  +  E  QL +L  L L  N L+ LP EIG++  L++L L  NPL
Sbjct: 208 LQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           RTL   +                            E L  + T        L LEG  ++
Sbjct: 268 RTLPKEI----------------------------EQLQKLQT--------LYLEGNQIT 291

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +   + +L+L  N +  LP E+    +LQ L L  N++   P  +   L  L 
Sbjct: 292 TFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEV-GQLQKLR 350

Query: 431 CLKLDNNPL 439
            L L NNP+
Sbjct: 351 KLNLYNNPI 359



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L VLN+  NKL+ LP  IG+L  L+ L++  N +  
Sbjct: 118 NLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTI 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   +   N+L  LP  +G+  NL    +  N +T+ P+++   SK+ KL
Sbjct: 178 LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT L                        PE IG L +L  L L  N + ++P  
Sbjct: 238 YLYGNQLTTL------------------------PEEIGQLKKLQELYLGNNPLRTLPKE 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   Y+  N ++  P E+G+L  L  L+L  NQL     E  QL+ L  L+L  
Sbjct: 274 IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEF 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           N L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 334 NQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 378



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 155/330 (46%), Gaps = 40/330 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L         P  +  L+
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------PEKIGQLQ 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +    N D    T   + I     L V    L+L+   L+ +P +I +   +  L+   N
Sbjct: 164 NLQVLNLDLNKLTILPEKIGQLQNLQV----LNLDLNKLTILPEKIGQLQNLQILNSQGN 219

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +   P E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I
Sbjct: 220 QLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEI 274

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
             LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N L
Sbjct: 275 EQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 313

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++P+    L +L EL+L  N ++ LP E+
Sbjct: 314 TTLPQEIGQLQNLQELNLEFNQLATLPKEV 343


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 171/340 (50%), Gaps = 43/340 (12%)

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  LI LD+    +  +P+ +    SL E Y+  N L  +PAELG+L  L  L L  NQL
Sbjct: 30  LGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQL 89

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +E   E  QLR L  L LS N L+G+P E+G++  L++L L+GN LR           P 
Sbjct: 90  REVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLRE---------VPT 140

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
            L  LR                DL             L L G  L  +P+E+ +  ++  
Sbjct: 141 ELGQLR----------------DL-----------HMLDLSGNQLREVPAELGQLRDLHM 173

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           LDLS N ++E+P EL   + L+ L L+ N++++ P A L  L  L  L L  N LR+VP+
Sbjct: 174 LDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVP-AELGQLRGLQELYLSGNQLREVPT 232

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +    +  LQ LDLS N +  +P       L  LQ+LYL   QLRE P ++ +L+ L +L
Sbjct: 233 E-LGQLRDLQELDLSGNQLTGIPTE--LGQLCGLQDLYLAGNQLREVPAELGQLRDLHML 289

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP-ELVS 542
           DLS N L+ +P     L+ L    + DN+    PP E+VS
Sbjct: 290 DLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTPPSEIVS 329



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 164/320 (51%), Gaps = 16/320 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L++S++ L  VP E+              +   LQ+L L  N + ++  +L  L  L  
Sbjct: 35  TLDISDKGLTQVPAEL-------------GQLRSLQELYLFGNQLREVPAELGQLRSLQE 81

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N+L E+PA +G+L  L+ L +S N +  IP E+G    L +   S NQL+E+P+ 
Sbjct: 82  LYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTE 141

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG+  +L     S N +  +P +L     +  LD+ GN+L  +   L    + L +L  +
Sbjct: 142 LGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAEL-GQLSRLEKLYLA 200

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  +G L  L  L L  N++  +P+ +     L E  +  N L+ +P ELG+L
Sbjct: 201 GNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQL 260

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PL 310
             L  L L  NQL+E   E  QLR L +LDLS N L  +P E+G+++ L    +  N  L
Sbjct: 261 CGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQL 320

Query: 311 RTLRSSLVNGPTPALLKYLR 330
            T  S +V+  T A+L +L+
Sbjct: 321 LTPPSEIVSQGTIAILTFLQ 340



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 36/295 (12%)

Query: 24  VPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           +PN+V   +D+ G         +L  L ++   + ++  +L  L  L  L +  N+L E+
Sbjct: 21  IPNDV--KYDDLG---------NLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREV 69

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           PA +G+L  L+ L ++ N + ++P E+G   +L +   S NQL  +P+ LG+   L +  
Sbjct: 70  PAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELY 129

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S N +  +P +L     +  LD+ GN+L                          +P  +
Sbjct: 130 LSGNQLREVPTELGQLRDLHMLDLSGNQLRE------------------------VPAEL 165

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  LDL  N++  +P+ +     L + Y+  N L  +PAELG+L  L  L L  N
Sbjct: 166 GQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGN 225

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           QL+E   E  QLR L  LDLS N L+G+P E+G++  L+ L L GN LR + + L
Sbjct: 226 QLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPAEL 280



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 157/340 (46%), Gaps = 22/340 (6%)

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D++G+   L+  D S   L ++P+ LG+  +L +     N +  +P +L     + +L +
Sbjct: 28  DDLGN---LITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYL 84

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+L  +   L      L EL  S N L G+P  +G L  L  L L  N++  +P+ + 
Sbjct: 85  AGNQLREVPAEL-GQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELG 143

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
               L    +  N L  +PAELG+L  L  LDL  NQL+E   E  QL RL  L L+ N 
Sbjct: 144 QLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQ 203

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L  +P E+G++  L++L L+GN LR           P  L  LR         E   +  
Sbjct: 204 LREVPAELGQLRGLQELYLSGNQLRE---------VPTELGQLRDL------QELDLSGN 248

Query: 347 DLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            L  + T L      ++L L G  L  +P+E+ +  ++  LDLS N ++E+P EL   + 
Sbjct: 249 QLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 308

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L    +  N     P + + S  +++ L       R+ P 
Sbjct: 309 LHAFCIEDNDQLLTPPSEIVSQGTIAILTFLQRMWRESPG 348



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 44/277 (15%)

Query: 5   LKAARTSGSLNLSNRSLRDVP---------NEVYKNFDE-AGEGDKWWEAVDLQKLILAH 54
           L   R+   L L+   LR+VP          E+Y + ++  G   +  +   LQ+L L+ 
Sbjct: 73  LGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSG 132

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + ++  +L  L  L +L++S N+L E+PA +G+L  L  LD+S N + ++P E+G  +
Sbjct: 133 NQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLS 192

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K   + NQL+E+P+ LG+   L +   S N +  +P +L     + +LD+ GN+LT 
Sbjct: 193 RLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLT- 251

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                                  G+P  +G L  L  L L  N++  +P+ +     L  
Sbjct: 252 -----------------------GIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHM 288

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
             +  N L  +PAELG+LS+     LH+     +C+E
Sbjct: 289 LDLSGNQLREVPAELGQLSR-----LHA-----FCIE 315



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 7/173 (4%)

Query: 371 AIPSEIW--EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
            IP+++   + G +  LD+S   + ++P EL    SLQ L L  N++++ P A L  L S
Sbjct: 20  VIPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVP-AELGQLRS 78

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  N LR+VP++    +  LQ L LS N +  +P       L  LQELYL   QL
Sbjct: 79  LQELYLAGNQLREVPAE-LGQLRSLQELYLSGNQLTGIPTE--LGQLRGLQELYLSGNQL 135

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           RE PT++ +L+ L +LDLS N L+ +P     L  L  LDLS N +  +P EL
Sbjct: 136 REVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAEL 188


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 64/496 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +++ L L+  N+  L  ++  L  L  L+V  N +  LPA +G+L  +K L++S+  +  
Sbjct: 162 NMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRI 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+ T L   D   NQL+ LP  +    N+      +  + +LP ++   +++  L
Sbjct: 222 LPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N L  L +  I   T +     S   L  +P  +G L++L  L+L QN + ++P+ 
Sbjct: 282 GLSSNNLQTLPSE-IGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPAD 340

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSN 284
           I     L    M    L+ LP E+G L++L  L +  N L+    +    + +   +LS 
Sbjct: 341 IRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQ 400

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
             L+ LPPEIG++  LR L L+ NPL+ L         P  L  L S             
Sbjct: 401 CQLTTLPPEIGRLAHLRWLDLSYNPLQIL---------PPNLGQLSS------------- 438

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          + L L    L  +P E+ +  +I  LDLS N +Q L  E+    +
Sbjct: 439 --------------IRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTN 484

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           ++ L +S  K+   P  +   L+ L  L L +NPL+ +P                     
Sbjct: 485 VKHLDMSECKLHSIPPEV-GKLTQLEWLHLSSNPLKTLP--------------------- 522

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
               P    L ++  L +   +LR  P ++ RL+QL+ L+LS N LQ++P     L ++ 
Sbjct: 523 ----PEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQ 578

Query: 525 ELDLSDNNISALPPEL 540
            LDLS   ++ LPPE+
Sbjct: 579 NLDLSSCELTTLPPEI 594



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 243/538 (45%), Gaps = 74/538 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS  +L  +P E+             W  + L+ L +  N I+ L   +  L  +  L
Sbjct: 166 LNLSKCNLHTLPLEI-------------WRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHL 212

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S+ KL  LP  IG L  L+ LD+  N +  +P E+   T +      S  +  LP  +
Sbjct: 213 NLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEV 272

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   L     S+N + +LP ++   + +   D+   KL  L                  
Sbjct: 273 GRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTL------------------ 314

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P  +G L++L  L+L QN + ++P+ I     L    M    L+ LP E+G L+
Sbjct: 315 ------PPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALT 368

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L +  N L+    +    + +   +LS   L+ LPPEIG++  LR L L+ NPL+ 
Sbjct: 369 QLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQI 428

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----LEGMN 368
                               LP N    +S    DL     +L    +EL     +E ++
Sbjct: 429 --------------------LPPNLGQLSSIRHLDL--SHCKLHTLPRELGKLTQIEWLD 466

Query: 369 LSAIPSEIW--EAGEIT---KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           LS  P ++   E G++T    LD+S   +  +PPE+     L+ L LS N +K  P  + 
Sbjct: 467 LSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEV- 525

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L++++ L +    LR +P +  + +  L+ L+LS N + +LP       L ++Q L L
Sbjct: 526 GQLANVTHLDMSECKLRTLPPEVGR-LEQLKWLNLSSNPLQALPAQ--IGQLNNIQNLDL 582

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              +L   P +I +L QL  L++S N LQ++P    +LT+++ L +S   +S  P E+
Sbjct: 583 SSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHLTNISHLKISTRTLSKPPAEV 640



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 2/296 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L++  N ++ L  D++++  +   N+S  +L+ LP  IG L  L+ LD+S+N +  +
Sbjct: 370 LECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQIL 429

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G  +++   D S  +L  LP  LG+   +     S N +  L  ++   + +  LD
Sbjct: 430 PPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLD 489

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +   KL  +    +   T L  L  S N L  +P  +G L+ +  LD+ + ++ ++P  +
Sbjct: 490 MSECKLHSIPPE-VGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEV 548

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L    + +N L ALPA++G+L+ +  LDL S +L     E  +L +L  L++S+N
Sbjct: 549 GRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVSDN 608

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            L  LP EI  +T +  L ++   L    + +       + +Y        ED  A
Sbjct: 609 PLQTLPAEIVHLTNISHLKISTRTLSKPPAEVCRQGIATIRQYFEELERSEEDVSA 664



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 14/268 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S NLS   L  +P E+ +                L+ L L++N ++ L  +L  L  +  
Sbjct: 395 SFNLSQCQLTTLPPEIGR-------------LAHLRWLDLSYNPLQILPPNLGQLSSIRH 441

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++SH KL  LP  +G+L  ++ LD+SFN +  +  E+G  T +   D S  +L  +P  
Sbjct: 442 LDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPE 501

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L     S+N + +LP ++   + ++ LD+   KL  L    +     L  L  S
Sbjct: 502 VGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPE-VGRLEQLKWLNLS 560

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ +  LDL    + ++P  I     L    + +N L  LPAE+  L
Sbjct: 561 SNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHL 620

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVL 280
           + +  L + +  L +   E C+  ++ +
Sbjct: 621 TNISHLKISTRTLSKPPAEVCRQGIATI 648



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 38/309 (12%)

Query: 266 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG----------NPLRTLRS 315
           KE+ +   ++ L  LD S + +  LP E+  +  L  L LTG            L+ L+ 
Sbjct: 14  KEWAISEERVTLLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKV 73

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
             +N      +  +  +LP+ +    S  +  ++          + L L   N+  +P+ 
Sbjct: 74  LNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTV 133

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           +W    +  L+L  N++  L  E+   ++++ L LS+  +   P  I   L  L  L + 
Sbjct: 134 VWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIW-RLIQLRWLDVR 192

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSY------------------------NIASLPENPPF 471
            NP++ +P+ G   +  ++ L+LSY                         + +LP    +
Sbjct: 193 FNPIQMLPA-GVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRY 251

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L +++ LYL    +   P ++ RL QL+ L LS N+LQ++P     LT++   DLS  
Sbjct: 252 --LTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLC 309

Query: 532 NISALPPEL 540
            +  LPPE+
Sbjct: 310 KLRTLPPEV 318


>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 217/446 (48%), Gaps = 54/446 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N +  + +++RNL  LT+L
Sbjct: 175 LDLRHNKLNEIPDVVYK-------------LTSLTTLFLRFNRVRYVSDNIRNLTNLTML 221

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + DVS N +  +P EIG+   L   D   N+L ++P ++
Sbjct: 222 SLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETI 281

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  ++++      N ++S+P+ LA+C  M +  VEGN+++ L + L++S + L  +  S+
Sbjct: 282 GNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSR 341

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  + +  ++L  N+I  IP  I S   +L +  M  N L+ALP + G 
Sbjct: 342 NAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGT 401

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +NQL +   +   L+ L +L LSNN L  +P  I  ++ LR L L  N +
Sbjct: 402 WINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKI 461

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + +LR                DL           ++L L+   ++
Sbjct: 462 ESL---------PNEIGFLR----------------DL-----------QKLILQSNQVT 485

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSL 429
           ++P  I     +T L +  N++  LP E+ +  +L  L ++ N  + + P   L   ++L
Sbjct: 486 SLPRAIGHLTNLTHLSVGENNLNYLPEEIGTLENLDCLYINDNANLHNLPFE-LALCTNL 544

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQI 455
           S + ++N PL Q+P +     P L I
Sbjct: 545 SIMSIENCPLSQIPPEIVAGGPSLVI 570



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 218/457 (47%), Gaps = 28/457 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
            K LD+S +SI  +P+ +   T LV+F    N+L  LP  +G   NL     S N +TSL
Sbjct: 103 FKRLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSL 162

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL  +  +++   T LT L    N +  + + I +L+ L  L
Sbjct: 163 PDTLENLKQLKVLDLRHNKLNEIP-DVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTML 221

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LPAE+G   +L TLDL  N+L +     
Sbjct: 222 SLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETI 281

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLK 327
             L  ++ L L  N LS +P  +     + +  + GN +  L     SSL N  T  L +
Sbjct: 282 GNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSR 341

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    S+ +                   ++LE   +  IP  I+  A  +TKL+
Sbjct: 342 NAFTAYPSGGPSQFTNV---------------YSINLEHNKIDKIPYGIFSRAKNLTKLN 386

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N +  LP +  +  ++  L L  N++   PD I   L +L  L L NN L+++P+  
Sbjct: 387 MKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDI-QYLQNLEILILSNNLLKRIPA-S 444

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  L++LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L +
Sbjct: 445 IASLSKLRVLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTHLSV 502

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            +N+L  +PE    L +L  L ++DN N+  LP EL 
Sbjct: 503 GENNLNYLPEEIGTLENLDCLYINDNANLHNLPFELA 539



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 207/454 (45%), Gaps = 65/454 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L+ L L+ N++  L + L NL  L VL++ HNKL+E+P  + +L  L +L + FN + 
Sbjct: 147 ANLKTLALSENSLTSLPDTLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVR 206

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D I + T L       N++KELP+ +G+  NL  F  S+N +  LP ++ +C ++S 
Sbjct: 207 YVSDNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLST 266

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+L  + RL L  NR+ SIP 
Sbjct: 267 LDLQHNELL------------------------DIPETIGNLVSVTRLGLRYNRLSSIPK 302

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C  + EF +  N +S LP   L  LS L T+ L  N    Y         +V  ++
Sbjct: 303 SLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSIN 362

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           L +N +  +P  I  +   L KL +  N L  L        T   +  +   L  N+  +
Sbjct: 363 LEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLD-----TGTWINMVELNLGTNQLVK 417

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                 D I     L +    L L    L  IP+ I    ++  LDL  N I+ LP E+ 
Sbjct: 418 IP----DDIQYLQNLEI----LILSNNLLKRIPASIASLSKLRVLDLEENKIESLPNEIG 469

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ LIL  N++   P AI   L++L+ L +  N L  +P    ++I  L+ LD  Y
Sbjct: 470 FLRDLQKLILQSNQVTSLPRAI-GHLTNLTHLSVGENNLNYLP----EEIGTLENLDCLY 524

Query: 461 -----NIASLP--------------ENPPFSSLP 475
                N+ +LP              EN P S +P
Sbjct: 525 INDNANLHNLPFELALCTNLSIMSIENCPLSQIP 558



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 159/351 (45%), Gaps = 25/351 (7%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL ++ I ++P+S+     L EFY+  N L  LP E+G L+ L TL L  N L     
Sbjct: 105 RLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLPD 164

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               L+ L VLDL +N L+ +P  + K+T+L  L L  N +R +  ++ N     +L   
Sbjct: 165 TLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 222

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSAIP 373
              L EN+  E       L  + T   V+   L                 L+   L  IP
Sbjct: 223 ---LRENKIKELPAGIGKLTNLVT-FDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIP 278

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L+SLS+L  + 
Sbjct: 279 ETIGNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTIT 338

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N     PS G      +  ++L +N I  +P    FS   +L +L ++  QL   P 
Sbjct: 339 LSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGI-FSRAKNLTKLNMKENQLTALPL 397

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           D      +  L+L  N L  IP+  + L +L  L LS+N +  +P  + S+
Sbjct: 398 DTGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASL 448


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 176/335 (52%), Gaps = 15/335 (4%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +L  L  L  LN+  N+L+ LPA IG+L  L+SL++ +N +  +P EI    +L      
Sbjct: 24  ELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLG 83

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  +P+ +G+  +L D     N +TS+P ++   + +++LD+  N+LT +    I  
Sbjct: 84  GNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAE-IWR 142

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T LT L  + N L  +P  I  L+ L  L L  N + S+P+ I    +L +  +  N L
Sbjct: 143 LTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQL 202

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+ +L+ L  L LH NQL     E  QL  L+ L L +N L+ +P EIG++ +L 
Sbjct: 203 TSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLV 262

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           KL L GN L +L         PA +  LR+ +    D    T+    I   T L+    E
Sbjct: 263 KLSLHGNRLTSL---------PAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLT----E 309

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           LSL G  L+++PSEI +   + +L LS N +  +P
Sbjct: 310 LSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVP 344



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 150/274 (54%), Gaps = 6/274 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N +  +  ++  L  L  L +  N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 54  LESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSV 113

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L + D   NQL  +P+ + R  +L+    ++N +TS+P ++   + + +L 
Sbjct: 114 PTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELW 173

Query: 167 VEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +  N LT +   +   W +  L +L  ++N L  +P  I  L+ L  L LH N++ S+P+
Sbjct: 174 LSANHLTSVPAEI---WQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPA 230

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLS 283
            I    SL    + +N L+++PAE+G++  L  L LH N+L     E  QLR  V  +L 
Sbjct: 231 EIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELD 290

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            N L+ +P EIG +T+L +L L GN L ++ S +
Sbjct: 291 RNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEI 324



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 174/363 (47%), Gaps = 39/363 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L  L++  N +  +P EIG   +L   +   N+L  +P  + +  +L   
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGL 80

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +TS+P ++   + +  L +E N+LT +    I   T LT+L    N L  +P  
Sbjct: 81  YLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTE-IGQLTSLTQLDLRDNQLTSVPAE 139

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L+ L  L+L+ N++ S+P+ I    SL E ++  N L+++PAE+ +L+ L  L +  
Sbjct: 140 IWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTE 199

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL  L+ L L  N L+ +P EIG++T+L  L L  N L ++        
Sbjct: 200 NQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSV-------- 251

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            PA +  +RS +                           +LSL G  L+++P+EI +   
Sbjct: 252 -PAEIGQIRSLV---------------------------KLSLHGNRLTSLPAEIGQLRA 283

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + + +L RN +  +P E+    SL  L L  N++   P  I   L+SL  L L  N L  
Sbjct: 284 LVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEI-GQLTSLGELSLSGNQLTS 342

Query: 442 VPS 444
           VP+
Sbjct: 343 VPA 345



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 169/346 (48%), Gaps = 19/346 (5%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G LS L+ L+L  N++  +P+ I    SL    +G N L+++P E+ +L+
Sbjct: 16  GLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLA 75

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L  N L+ +P EIG++T+L +L L  N L +
Sbjct: 76  SLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTS 135

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S    N +    T+    I   T L    +EL L   +L+++
Sbjct: 136 V---------PAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSL----RELWLSANHLTSV 182

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EIW+   + KL ++ N +  +P E+    SL  L L  N++   P A +  L+SL+ L
Sbjct: 183 PAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVP-AEIGQLTSLTAL 241

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  VP++    I  L  L L  N + SLP       L  L E  L R  L   P
Sbjct: 242 SLYDNQLTSVPAE-IGQIRSLVKLSLHGNRLTSLPAE--IGQLRALVEFELDRNLLTSVP 298

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +I  L  L  L L  N L S+P     LTSL EL LS N ++++P
Sbjct: 299 AEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVP 344



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 17/253 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L  VP E+             W    L  L L  N +  +  ++R L  L  L
Sbjct: 126 LDLRDNQLTSVPAEI-------------WRLTSLTYLNLNDNQLTSVPAEIRQLTSLREL 172

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N L+ +PA I +L  L  L V+ N +  +P EI   T+L +     NQL  +P+ +
Sbjct: 173 WLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEI 232

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L+     +N +TS+P ++     + KL + GN+LT L    I     L E    +
Sbjct: 233 GQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAE-IGQLRALVEFELDR 291

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P  IG L+ L  L LH N++ S+PS I    SL E  +  N L+++PA + +L 
Sbjct: 292 NLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELE 351

Query: 254 KLGT---LDLHSN 263
             G    LDL S+
Sbjct: 352 AAGCYMDLDLDSD 364



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 40/299 (13%)

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
            A+PAELG+LS L  L+L  NQL     E  QL  L  L+L  N L+ +P EI ++ +L 
Sbjct: 19  GAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLE 78

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L GN L ++         PA +  L             T+ EDL             
Sbjct: 79  GLYLGGNQLTSV---------PAEIGQL-------------TSLEDL------------- 103

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
            SLE   L+++P+EI +   +T+LDL  N +  +P E+    SL  L L+ N++   P A
Sbjct: 104 -SLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVP-A 161

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
            +  L+SL  L L  N L  VP++ ++   ++++      + S+P       L  L ELY
Sbjct: 162 EIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAE--IWQLTSLTELY 219

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   QL   P +I +L  L  L L  N L S+P     + SL +L L  N +++LP E+
Sbjct: 220 LHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEI 278



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 9/182 (4%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KE  L G    A+P+E+     +  L+L  N +  LP E+   ASL++L L  N++   P
Sbjct: 13  KEFGLTG----AVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVP 68

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L+SL  L L  N L  VP++    +  L+ L L  N + S+P       L  L 
Sbjct: 69  VEIW-QLASLEGLYLGGNQLTSVPAE-IGQLTSLEDLSLEANRLTSVPTE--IGQLTSLT 124

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +L LR  QL   P +I RL  L  L+L+ N L S+P   + LTSL EL LS N+++++P 
Sbjct: 125 QLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPA 184

Query: 539 EL 540
           E+
Sbjct: 185 EI 186


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 205/436 (47%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +TS+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 401 NQFTSYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 519

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           + TL   +       LL  L                              + L L+   +
Sbjct: 520 IETLPHEI------GLLHEL------------------------------QRLILQTNQI 543

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 544 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 604 KYLNIDKCPLSTIPPE 619



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     + +    SN++ +LP  +G  +NL +   + N +TSL
Sbjct: 162 IKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSL 221

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +C+++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 222 PESLQNCNQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N L+ +P  +     + +  + GN +    + L +G   +L      
Sbjct: 341 GNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGI----TQLPDGMLASLSGLTTI 396

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 397 TLSRNQFTSYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 449

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 450 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 507

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I +LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 508 RRLRILDLEENRIETLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 565

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 566 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 598



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 199/417 (47%), Gaps = 23/417 (5%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT +P  + DC ++++L +  NK+  L    I    
Sbjct: 148 QDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPE-IGCLV 206

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +PE++ + ++L  LDL  N++  IP  I    SL   Y+  N ++A
Sbjct: 207 NLRNLALNENSLTSLPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA 266

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 267 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 326

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N     L   +R  +  N  +    T ++   M         E +
Sbjct: 327 DLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLTSVPATLKNCKCM--------DEFN 373

Query: 364 LEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDA 421
           +EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I   P  
Sbjct: 374 VEGNGITQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYG 433

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L +L+ L
Sbjct: 434 IFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQNLEIL 490

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L    L++ P  I  L++LRILDL +N ++++P     L  L  L L  N I+ LP
Sbjct: 491 ILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPHEIGLLHELQRLILQTNQITMLP 547


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 224/496 (45%), Gaps = 67/496 (13%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  LQ   L    +  +  ++  +  L+VLN+  NK+  LP  +G+L  LK+L ++ NS+
Sbjct: 515 AGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSL 574

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P+E+G  T+L   D   N+L ELP+++   ++L+      N +  LPE++     + 
Sbjct: 575 RTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLE 634

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L V  N+L                        + +P  +   + L  LD+  N +    
Sbjct: 635 MLSVRNNQL------------------------HKLPRKLSMATNLKILDISTNHLTKF- 669

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+   C L +  +  N L+ LP   G L+ L  LD+  N+L+E+ V   +L RL  LDL
Sbjct: 670 RSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDL 729

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             N L+ L PEIG MT+LR L L  N L  L + L       +L  LR            
Sbjct: 730 EANQLTVLAPEIGNMTSLRSLYLGRNKLIALPAEL------GMLTGLR------------ 771

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                             EL L+G  L AIP E+     +  LDLS N  Q  P      
Sbjct: 772 ------------------ELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFP 813

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            +L +L +S N++K   + I  +L++L  L LD N L ++P +    +  L  L + YN 
Sbjct: 814 PALNSLNMSDNQMKRLSNQI-GALTTLKQLNLDENQLDRLPGE-ISLLTGLTELRVGYNE 871

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           + +LP       +  +++L+L   ++ E P  I  L  L +  ++ N L  +P    N+T
Sbjct: 872 LLTLPHE--IGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMT 929

Query: 522 SLTELDLSDNNISALP 537
           SL+EL +  N    LP
Sbjct: 930 SLSELKVDGNPFDNLP 945



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 195/429 (45%), Gaps = 44/429 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE  +L  L L  N IE L  DL  L  L  L ++ N L  LP  +G+L  L  LD+ +N
Sbjct: 536 WEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYN 595

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  I     L K     N+L++LP  +G  ++L      NN +  LP  L+  + 
Sbjct: 596 KLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATN 655

Query: 162 MSKLDVEGNKLTVLSN------------------NLIASWTMLTELI---ASKNLLNGMP 200
           +  LD+  N LT   +                   L   W  LT+L+    S+N L   P
Sbjct: 656 LKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFP 715

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            TI  L RL  LDL  N++  +   I    SL   Y+G N L ALPAELG L+ L  L L
Sbjct: 716 VTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHL 775

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+LK    E   L  L  LDLS N     P        L  L ++ N ++ L + +  
Sbjct: 776 KGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQI-- 833

Query: 320 GPTPALLKYLRSRLPENE----DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
               AL    +  L EN+      E S     L+T  T L V   E       L  +P E
Sbjct: 834 ---GALTTLKQLNLDENQLDRLPGEIS-----LLTGLTELRVGYNE-------LLTLPHE 878

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   I +L L  N + ELP  + + ++L+  +++ N + D P+ ++ +++SLS LK+D
Sbjct: 879 IGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMV-NMTSLSELKVD 937

Query: 436 NNPLRQVPS 444
            NP   +P+
Sbjct: 938 GNPFDNLPA 946



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 183/407 (44%), Gaps = 53/407 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N++  L  +L  L  LT+L++ +NKL+ELPA I  L  L  L + +N + ++
Sbjct: 564 LKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 623

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG   +L      +NQL +LP  L    NL     S N +T     +    ++  LD
Sbjct: 624 PEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLD 682

Query: 167 VEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           ++ NKLT L +     W  LT+L+    S+N L   P TI  L RL  LDL  N++  + 
Sbjct: 683 LKQNKLTTLPD----GWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLA 738

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             I    SL   Y+G N L ALPAELG L+ L  L L  N+LK    E   L  L  LDL
Sbjct: 739 PEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDL 798

Query: 283 SNNSLSGLPP-----------------------EIGKMTTLRKLLLTGNPLRTLRS--SL 317
           S N     P                        +IG +TTL++L L  N L  L    SL
Sbjct: 799 STNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISL 858

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSE 375
           + G T   + Y                  +L+T+   +   S  K+L LE   +  +P  
Sbjct: 859 LTGLTELRVGY-----------------NELLTLPHEIGDISLIKQLHLEHNKMVELPKS 901

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           I     +    ++ N + +LP E+ +  SL  L +  N   + P A+
Sbjct: 902 IGNLSALELFVVTDNLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAV 948



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 185/435 (42%), Gaps = 67/435 (15%)

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           GSA  L  +D    +L  +PS++    NLS      N I SLP DL   +K+  L +  N
Sbjct: 513 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 572

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L N L                        G L+ L  LDL  N++  +P++I    
Sbjct: 573 SLRTLPNEL------------------------GQLTSLTMLDLRYNKLTELPATIKHLV 608

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 289
            L + ++  N L  LP E+G L  L  L + +NQL +   + +    L +LD+S N L+ 
Sbjct: 609 HLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTK 668

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
               + K+  L+ L L  N L TL                        D   + T  DL+
Sbjct: 669 FR-SVEKLCQLKDLDLKQNKLTTL-----------------------PDGWGALT--DLM 702

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
               RL V+  +L          P  I E   +  LDL  N +  L PE+ +  SL++L 
Sbjct: 703 ----RLDVSQNKLE-------EFPVTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLY 751

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           L RNK+   P A L  L+ L  L L  N L+ +P +    +  L+ LDLS N   + P+ 
Sbjct: 752 LGRNKLIALP-AELGMLTGLRELHLKGNRLKAIPPE-LSALVNLKHLDLSTNEFQTFPDA 809

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
             F   P L  L +   Q++     I  L  L+ L+L +N L  +P     LT LTEL +
Sbjct: 810 RCFP--PALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRV 867

Query: 529 SDNNISALPPELVSV 543
             N +  LP E+  +
Sbjct: 868 GYNELLTLPHEIGDI 882



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           S+ E+    S   LQ   LRR +L   P+++  ++ L +L+L  N ++S+P     LT L
Sbjct: 505 SMAEDSGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKL 564

Query: 524 TELDLSDNNISALPPEL 540
             L L++N++  LP EL
Sbjct: 565 KALGLNENSLRTLPNEL 581


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 25/288 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N +  L +++ NL  L  L++  NK++ LP  IG+L  L+ L++SFN +  
Sbjct: 61  NLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLAT 120

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +     NQ   LP  +G+  NL +   + N +T+LP+++ +   + +L
Sbjct: 121 LPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQEL 180

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L +L+ ++N L  +P  IG+L  L  L+L +N++ ++P  
Sbjct: 181 YLNENQLTALPKE-IGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKE 239

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEA 272
           I    +L   ++GNN L+ALP E+  L KL  L L+ NQ             LKE  + +
Sbjct: 240 IGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSS 299

Query: 273 CQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            QL           +L  LDL NN L+ LP EIGK+  L+ L L GNP
Sbjct: 300 NQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNP 347



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 168/357 (47%), Gaps = 42/357 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VL+++  KL  LP  IG+L  LK L++  N +  +P EIG+   L K 
Sbjct: 29  LNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKL 88

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   N++  LP  +G+  +L +   S N + +LP+++ +   + +L +  N+ T L    
Sbjct: 89  DLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL---- 144

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               PE IG L  L  L L++N++ ++P  I    +L E Y+  
Sbjct: 145 --------------------PEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNE 184

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ALP E+GKL  L  L L+ NQL    +E   L+ L  L+L  N L+ LP EIGK+ 
Sbjct: 185 NQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQ 244

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L  L   + N      LK+L               K  L T+   +   
Sbjct: 245 NLQGLHLGNNKLTALPIEIENLQK---LKWL------------GLNKNQLTTIPKEIGNL 289

Query: 359 S--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
              KEL+L    L+ IP EI    ++  LDL  N +  LP E+    +LQ L L  N
Sbjct: 290 QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGN 346



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L+  +++++P  I    +L E  +  N L+ LP E+G L  L  LDL  N++     E
Sbjct: 42  LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKE 101

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L+LS N L+ LP EIG +  L++L L  N                      
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQF-------------------- 141

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           + LPE             I     L    +EL L    L+ +P EI     + +L L+ N
Sbjct: 142 TALPEE------------IGKLQNL----QELYLNENQLTTLPKEIGNLQNLQELYLNEN 185

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ L+L+RN++   P  I  +L +L  L LD N L  +P +    +
Sbjct: 186 QLTALPKEIGKLQNLQKLVLNRNQLTTLPIEI-GNLQNLQGLNLDKNQLTTLPKE-IGKL 243

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L L  N + +LP      +L  L+ L L + QL   P +I  LQ L+ L+LS N 
Sbjct: 244 QNLQGLHLGNNKLTALP--IEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQ 301

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L +IP+  +NL  L  LDL +N ++ LP E+
Sbjct: 302 LTTIPKEIENLQKLETLDLYNNQLTTLPKEI 332



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 32/204 (15%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D+E   T  + +   T++ V    L L G  L A+P EI +   + +L+L  N +  LP 
Sbjct: 22  DAEDFHTLNEALQNPTQVRV----LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQ 77

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+ +   LQ L L  NKI   P  I                           +  LQ L+
Sbjct: 78  EIGNLQHLQKLDLGFNKITVLPKEI-------------------------GQLQSLQELN 112

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           LS+N +A+LP+     +L HL+ L+L   Q    P +I +LQ L+ L L++N L ++P+ 
Sbjct: 113 LSFNQLATLPK--EIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKE 170

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             NL +L EL L++N ++ALP E+
Sbjct: 171 IGNLQNLQELYLNENQLTALPKEI 194


>gi|405966144|gb|EKC31462.1| hypothetical protein CGI_10021564 [Crassostrea gigas]
          Length = 717

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 237/522 (45%), Gaps = 42/522 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+++ N +  +   +R+L  +T L ++ N+++ LP +IGEL  L+ L +  N++  +
Sbjct: 157 LRELVVSDNRLTAVPPQIRDLLEITHLVLNDNQITVLPDSIGELTTLQVLGLERNALEFL 216

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             E+     L +   S N L+ LP  +     L +    +N    +P  +     +  L 
Sbjct: 217 NPEVCKIEQLKRLGLSGNSLRNLPREIENFSCLEELLLDDNEFEFIPVQVFWMETLQMLT 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +  + I   T LT +  + NL+  +PE    L  L  + L  N+I +IP +I
Sbjct: 277 MSGNRLTSIQPD-IGRLTQLTVIGLNNNLIEEIPEEFFQLEALEVVGLENNKIKAIPDNI 335

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           +    L E Y+G N++  +P  L   S L  L L +N +    VE   LR +  L LSNN
Sbjct: 336 ANLYELRELYLGRNSIEHVPENLCWCSNLEVLSLLNNSISVLPVEVENLRRIHTLILSNN 395

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
               LP  IG +  L      GN L  +            LK LR         + S+ K
Sbjct: 396 KFEFLPEAIGLIRDLEIFFADGNKLSYVPVDF------GTLKRLRQ-------IDLSSNK 442

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +  +      T + L L    + +IP+EI     ++ L L+ N I    PEL S   L
Sbjct: 443 FSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLSSLYLNNNKIHTFAPELCSLIQL 502

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL----SYN 461
             L  S N ++D PDAI + + +L+ L L +N   + P      IP L+ L       + 
Sbjct: 503 HILDFSNNYVEDIPDAI-SQMENLTDLDLSHNRFLEFPK-TVVGIPRLERLKFDQAEGHP 560

Query: 462 IASLPENPPFSSLPHL--QELYLRRM------------------QLREAPTDILRLQQLR 501
           +  LP+   FS++ +L      LR +                  ++ E P    RL++L+
Sbjct: 561 VPGLPDEIEFSNVSYLIVSNNTLRTLPSTMSGMKNIISIIADHNEIGELPDSFCRLRRLQ 620

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +L L+ N L S+PE F +L +L +L L +N +   PP  V V
Sbjct: 621 VLHLNDNKLSSLPENFDHLRNLKDLRLHNNPLRT-PPMDVCV 661



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 216/483 (44%), Gaps = 59/483 (12%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           V  D   ++LKE P ++    N++    SNN +T +P+++++   + +LD+  NKL+ L+
Sbjct: 66  VTVDLRGHRLKECPQAILSMENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKLSTLT 125

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I   T LT L  S N ++ +   I  L  L  L +  NR+ ++P  I     +    
Sbjct: 126 RG-IYLLTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLV 184

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + +N ++ LP  +G+L+ L  L L  N L+    E C++ +L  L LS NSL  LP EI 
Sbjct: 185 LNDNQITVLPDSIGELTTLQVLGLERNALEFLNPEVCKIEQLKRLGLSGNSLRNLPREIE 244

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
             + L +LLL  N    +   +    T  +L    +RL   +      T+  +I +   L
Sbjct: 245 NFSCLEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPDIGRLTQLTVIGLNNNL 304

Query: 356 SVTSKE----------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                E          + LE   + AIP  I    E+ +L L RNSI+ +P  L  C++L
Sbjct: 305 IEEIPEEFFQLEALEVVGLENNKIKAIPDNIANLYELRELYLGRNSIEHVPENLCWCSNL 364

Query: 406 Q-----------------------TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +                       TLILS NK +  P+AI   +  L     D N L  V
Sbjct: 365 EVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAI-GLIRDLEIFFADGNKLSYV 423

Query: 443 PSDGFKDIPMLQILDLS---YNIASLP-----------------ENPP--FSSLPHLQEL 480
           P D F  +  L+ +DLS   ++I  LP                 E+ P   ++L  L  L
Sbjct: 424 PVD-FGTLKRLRQIDLSSNKFSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLSSL 482

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YL   ++     ++  L QL ILD S N ++ IP+    + +LT+LDLS N     P  +
Sbjct: 483 YLNNNKIHTFAPELCSLIQLHILDFSNNYVEDIPDAISQMENLTDLDLSHNRFLEFPKTV 542

Query: 541 VSV 543
           V +
Sbjct: 543 VGI 545



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 171/356 (48%), Gaps = 40/356 (11%)

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           + + + +DL  +R+   P +I    ++    + NN L+ +P E+  L  L  LDL  N+L
Sbjct: 62  VGKRVTVDLRGHRLKECPQAILSMENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKL 121

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                    L  L+ LD+SNN +S +  EI  +  LR+L+++ N L  +   + +     
Sbjct: 122 STLTRGIYLLTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRD----- 176

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LL+     L +N+     T   D I   T L V    L LE   L  +  E+ +  ++ +
Sbjct: 177 LLEITHLVLNDNQ----ITVLPDSIGELTTLQV----LGLERNALEFLNPEVCKIEQLKR 228

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI---------------LTS---- 425
           L LS NS++ LP E+ + + L+ L+L  N+ +  P  +               LTS    
Sbjct: 229 LGLSGNSLRNLPREIENFSCLEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPD 288

Query: 426 ---LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L+ L+ + L+NN + ++P + F+ +  L+++ L  N I ++P+N   ++L  L+ELY
Sbjct: 289 IGRLTQLTVIGLNNNLIEEIPEEFFQ-LEALEVVGLENNKIKAIPDN--IANLYELRELY 345

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L R  +   P ++     L +L L  NS+  +P   +NL  +  L LS+N    LP
Sbjct: 346 LGRNSIEHVPENLCWCSNLEVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLP 401


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 247/552 (44%), Gaps = 63/552 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 17  LDLSNQGLTSIPEEVF-------------DITDLEVLDVSNNKLTNIPEAIGRLQKLDTL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AI  L  LK L V  N +  +PD + S   L   +  +N+L +LPS +
Sbjct: 64  SAYSNMLTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKV 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             C NL      NN +++ P  +    K++KL +  N+LT + +  + S + L  L  ++
Sbjct: 124 FSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSG-VYSLSNLEVLCVAR 182

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG--------------- 238
           N +  + + I  L+RL  L +        P  +    +L   Y G               
Sbjct: 183 NPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELE 242

Query: 239 -----------NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
                      NN L  LP+ +  L  L  ++L +NQ   +    C+L  +  LD+ NNS
Sbjct: 243 DLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNS 302

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           ++ LP  + +   L  L + GNPL T     V G T A++ +L+    + E+ +  T   
Sbjct: 303 ITRLPIALHRADKLEDLNVFGNPL-TYPPRHVQG-TRAIMTFLKQ---QGENLQPQTVNG 357

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L            ++ L    L++IP E+++   +  LD+S N +  +P  +     L 
Sbjct: 358 HL------------KIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLN 405

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
            +    N +   P AI  SLS L+ L + +N L ++P      +  L++L +  N +++L
Sbjct: 406 RMDAGGNMLTSLPQAI-GSLSKLTHLYIYDNRLTELPP-WICSLCNLEVLVVGNNRLSTL 463

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P  P    L  L  L++   QL+E P  I  L  L +L    N L  +P G   L +L E
Sbjct: 464 P--PDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRE 521

Query: 526 LDLSDNNISALP 537
           L ++DN +  LP
Sbjct: 522 LFINDNQVKMLP 533



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 181/403 (44%), Gaps = 38/403 (9%)

Query: 43  EAVDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E  DLQ L    L +N +  L   + +L  L V+N+ +N+    P  + EL  +K LD+ 
Sbjct: 240 ELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIK 299

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF----------------- 142
            NSI ++P  +  A  L   +   N L   P  +     +  F                 
Sbjct: 300 NNSITRLPIALHRADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGENLQPQTVNGHL 359

Query: 143 --KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               SN  +TS+PE++ D + +  LDV  N+LT +    I     L  + A  N+L  +P
Sbjct: 360 KIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPE-AIGRLQKLNRMDAGGNMLTSLP 418

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IGSLS+L  L ++ NR+  +P  I   C+L    +GNN LS LP ++ KL KL  L +
Sbjct: 419 QAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHI 478

Query: 261 HSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           H NQLKE     C  L L VL   NN LS LPP +G++  LR+L +  N ++ L   +  
Sbjct: 479 HDNQLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVF- 537

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
               +L  +        E  + S  K   +    + +   +E+ L        P  + E 
Sbjct: 538 ----SLFNF--------EVLDVSNNKVSTLPPGAK-NANLREVYLYNNKFDTFPEVLCEL 584

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
             + KLD+  N+I  LP  L     L+ L +S N +   P  +
Sbjct: 585 PAMEKLDIRFNNISRLPTALHRADKLEDLDVSGNPLTYPPQDV 627



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 209/512 (40%), Gaps = 99/512 (19%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S   +  IP+E+   T L   D S+N+L  +P ++GR   L    A +N +TSLP  
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTSLPHA 76

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +    ++  L V  N L++L                        P+ + SL  L  L++ 
Sbjct: 77  IRSLQELKLLVVYNNDLSML------------------------PDGLESLENLEYLNVK 112

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++  +PS +  C +L    +GNN LS  PA + KL KL  L LHSN+L E       L
Sbjct: 113 NNKLTKLPSKVFSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSL 172

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L VL ++ N +  L  +I ++T L+ L++           +++  T  +L        
Sbjct: 173 SNLEVLCVARNPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYA------ 226

Query: 335 ENEDSEASTTKEDLIT------------------MATRLSVTSKELSLEGMNL-----SA 371
                +A  +K D++                   + T  S  S   +L  +NL       
Sbjct: 227 ----GQAGGSKFDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDT 282

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            P  + E   + +LD+  NSI  LP  L     L+ L +  N +   P  +  + + ++ 
Sbjct: 283 FPEVLCELPAMKELDIKNNSITRLPIALHRADKLEDLNVFGNPLTYPPRHVQGTRAIMTF 342

Query: 432 LK------------------LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN---- 468
           LK                  L N  L  +P + F DI  L++LD+S N + S+PE     
Sbjct: 343 LKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEVF-DITGLEVLDVSNNELTSIPEAIGRL 401

Query: 469 -----------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
                                SL  L  LY+   +L E P  I  L  L +L +  N L 
Sbjct: 402 QKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLS 461

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           ++P   + L  LT L + DN +  +P  + S+
Sbjct: 462 TLPPDIEKLRKLTNLHIHDNQLKEVPQAICSL 493



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 3/299 (1%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           K+ L++  +  + E++ ++  L VL+VS+N+L+ +P AIG L  L  +D   N +  +P 
Sbjct: 360 KIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQ 419

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            IGS + L       N+L ELP  +    NL      NN +++LP D+    K++ L + 
Sbjct: 420 AIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIH 479

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  +    I S   L  L+   N L+ +P  +G L  L  L ++ N++  +P  +  
Sbjct: 480 DNQLKEVPQ-AICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVFS 538

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +     + NN +S LP    K + L  + L++N+   +    C+L  +  LD+  N++
Sbjct: 539 LFNFEVLDVSNNKVSTLPPG-AKNANLREVYLYNNKFDTFPEVLCELPAMEKLDIRFNNI 597

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           S LP  + +   L  L ++GNPL      +    T A++ +L+      +     T  E
Sbjct: 598 SRLPTALHRADKLEDLDVSGNPLTYPPQDVCKQGTAAIMAFLKHETAARKSDNMETASE 656


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 74/403 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +PNE+              +  +LQ+L L++N ++ L +++  L  L VL
Sbjct: 51  LDLSEQKLKTLPNEIE-------------QLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L+ LP  IG L  L+ L +++N +  +P+EIG    L +    +NQL  LP  +
Sbjct: 98  ELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP+++     +   ++  N+LT L                  
Sbjct: 158 GQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTL------------------ 199

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 PE IG L  L  L+L+ N++ ++P  I    +L    +G N  + LP E+GKL 
Sbjct: 200 ------PEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK 253

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L LH NQ K    E  +L+ L VL L +N    +P EIGK+  L+ L L  N  + 
Sbjct: 254 NLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKI 313

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         P  ++ L++                            + L+L+   L+ +
Sbjct: 314 I---------PKEIEQLQN---------------------------LQWLNLDANQLTTL 337

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           P EI +   + +L LS N  + LP E+    +L+ L L+ +++
Sbjct: 338 PKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNHQL 380



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 166/369 (44%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  I +L  L+ L +S+N +  +P EIG    L   +   NQL  LP 
Sbjct: 50  VLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +   + N +T LP ++     + +L +  N+L  L                
Sbjct: 110 EIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTL---------------- 153

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L L  N++ ++P  I    +L  F + NN L+ LP E+GK
Sbjct: 154 --------PKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGK 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L++NQL     E  QL+ L  LDL  N  + LP EIGK+  L+ L L  N  
Sbjct: 206 LKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           + +   +       +L           D++     +++  +        K LSL      
Sbjct: 266 KIIPKEIGKLKNLQVLHL--------HDNQFKIIPKEIGKLK-----NLKMLSLGYNQFK 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            IP EI +   +  L+L  N +  LP E+    +LQ L LS N+ K  P  I   L +L 
Sbjct: 313 IIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEI-GQLKNLK 371

Query: 431 CLKLDNNPL 439
            L L+N+ L
Sbjct: 372 KLYLNNHQL 380



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 180/397 (45%), Gaps = 43/397 (10%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + M + + I +   +   D S  +LK LP+ + +  NL     S N + +LP+++     
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQN 93

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N+LT L    I     L EL  + N L  +P  IG L  L RL L  N++++
Sbjct: 94  LRVLELIHNQLTTLPKE-IGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMT 152

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L   Y+ NN L+ LP E+G+L  L   +L++NQL     E  +L+ L VL
Sbjct: 153 LPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVL 212

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +L+NN L+ LP EIG++  L+ L L  N                      + LPE     
Sbjct: 213 ELNNNQLTTLPKEIGQLKNLQWLDLGYNQF--------------------TILPEE---- 248

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                   I     L V    L L       IP EI +   +  L L  N  + +P E+ 
Sbjct: 249 --------IGKLKNLQV----LHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIG 296

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              +L+ L L  N+ K  P  I   L +L  L LD N L  +P +  + +  LQ L LSY
Sbjct: 297 KLKNLKMLSLGYNQFKIIPKEI-EQLQNLQWLNLDANQLTTLPKE-IEQLQNLQELYLSY 354

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N   +LP+      L +L++LYL   QL     + +R
Sbjct: 355 NQFKTLPK--EIGQLKNLKKLYLNNHQLSSEEKERIR 389



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 47/349 (13%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P+T   L+  I+       LDL + ++ ++P+ I    +L   Y+  N L  LP E+G+L
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  NQL     E  +L+ L  L L+ N L+ LP EIG++  L++L L  N L 
Sbjct: 92  QNLRVLELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLM 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +        LK L++    N      TT    I     L V      L    L+ 
Sbjct: 152 TLPKEI------GQLKNLQTLYLWNNQL---TTLPKEIGQLKNLQV----FELNNNQLTT 198

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  L+L+ N +  LP E+    +LQ L L  N+    P+ I   L +L  
Sbjct: 199 LPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEI-GKLKNLQV 257

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N  + +P +                            L +LQ L+L   Q +  P
Sbjct: 258 LHLHDNQFKIIPKE-------------------------IGKLKNLQVLHLHDNQFKIIP 292

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I +L+ L++L L  N  + IP+  + L +L  L+L  N ++ LP E+
Sbjct: 293 KEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEI 341



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N  + + +++  L  L VL++  N+   +P  IG+L  LK L + +N    
Sbjct: 254 NLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKI 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EI     L   +  +NQL  LP  + +  NL +   S N   +LP+++     + KL
Sbjct: 314 IPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKL 373

Query: 166 DVEGNKLT 173
            +  ++L+
Sbjct: 374 YLNNHQLS 381



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +   + +P E+ K               +LQ L L  N  + + +++  L  L +L
Sbjct: 258 LHLHDNQFKIIPKEIGK-------------LKNLQVLHLHDNQFKIIPKEIGKLKNLKML 304

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+   +P  I +L  L+ L++  N +  +P EI     L +   S NQ K LP  +
Sbjct: 305 SLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEI 364

Query: 134 GRCLNLSDFKASNNCITS 151
           G+  NL     +N+ ++S
Sbjct: 365 GQLKNLKKLYLNNHQLSS 382


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 180/372 (48%), Gaps = 15/372 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDL  N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLK 391

Query: 404 SLQTLILSRNKI 415
           +LQ L L+ N+ 
Sbjct: 392 NLQELYLNNNQF 403



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 173/354 (48%), Gaps = 19/354 (5%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKE--IGKLQKLQTLNLWNNQ 333

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDL +N ++ LP E+
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEI 387



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 38/305 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  +    L+L N  L  +P E+              +  +LQ+L L++N +  L +++
Sbjct: 134 IRQLKNLQMLDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEI 180

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L +L++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL +    +N +T LP+++     + +  ++ N+ T+L         
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL--------- 291

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          P+ IG L  L  L L  N++ + P  I     L    + NN L+ 
Sbjct: 292 ---------------PKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+ +L  L TL+L  NQLK    E  QL+ L  LDL NN L+ LP EIG++  L++L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQEL 396

Query: 304 LLTGN 308
            L  N
Sbjct: 397 YLNNN 401



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N +  LP+      L +LQELYL   QL   P +I +L+ L++L L ++ L  +P+ 
Sbjct: 145 LGNNQLTILPKE--IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L ELDLS N ++ LP E+
Sbjct: 203 IGKLQNLHELDLSHNQLTILPKEI 226


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 259/552 (46%), Gaps = 79/552 (14%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  DL +L +   ++  L E + NL  LT L V + K++ LP +IG L  LK LD+++N 
Sbjct: 37  DLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKELDLTWNL 96

Query: 103 IMKIPDEIGSATALVKFDCS-SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD--- 158
           I  +P  IG  + L   + S + +L ELP S+G    L+    S   IT+LPE + +   
Sbjct: 97  IEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDR 156

Query: 159 --------CSKMSKLDVEGNKLTVLSNNLIASW-----------------TMLTELIASK 193
                   CS++ ++      L  L++  I  W                 + LT L  + 
Sbjct: 157 LKHLNLSWCSQLQQIPTAIGSLKNLTH--IQLWGSGQSSIFKTIEQLGAQSNLTHLYINS 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           + +  +PE+IG+LS+L  LDL  NR+ S+P SI    +L    +  N ++ LP  +  L 
Sbjct: 215 SSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLV 274

Query: 254 KLGTLDLHSNQLKEYCVEAC------------------------QLR-LSVLDLSNNSLS 288
            L  L+L+SN+L     E+                          L+ L+ L L NN L+
Sbjct: 275 NLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLT 334

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            LP  IGK+T L  L L  N +  L     +LVN     L     +RLP++         
Sbjct: 335 SLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDD--------- 385

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I    +L    KEL L   NL  +P  I     ++ LDL RN I ELP  + +  ++
Sbjct: 386 ---IGNLKKL----KELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNI 438

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L L +N++   P+ I ++L S+S L L  N ++ +P +G  ++  L+ L +  N +  
Sbjct: 439 EKLDLYKNRLTCLPETI-SNLQSISHLYLQRNYIKLLP-EGMGNLTNLKKLKIWNNRLRC 496

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LPE+    +  +LQ L +R  +LR  P  I  L  L  LD + N L  IP+   N+T+L 
Sbjct: 497 LPESIGNLA-ANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLK 555

Query: 525 ELDLSDNNISAL 536
            L+L+ N ++ L
Sbjct: 556 TLNLTKNPLTDL 567



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 236/485 (48%), Gaps = 23/485 (4%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           ++L +  N+L+ LP  IG+L  L  L +++ S+  +P+ IG+ + L +    + ++  LP
Sbjct: 19  SILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLP 78

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-EGNKLTVLSNNLIASWTMLTEL 189
            S+G   NL +   + N I  LP  + D S ++ L++    KL  L ++ I + + LT L
Sbjct: 79  ESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDS-IGNLSKLTYL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQ-NRILSIPSSISGCCSLAEFYM---GNNALSAL 245
             S  ++  +PE+IG+L RL  L+L   +++  IP++I    +L    +   G +++   
Sbjct: 138 NLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKT 197

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             +LG  S L  L ++S+ +         L +L+ LDLS+N L+ LP  IG +  L  L 
Sbjct: 198 IEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLN 257

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS-----------TTKEDLITMAT 353
           L  N +  L  S+ +      L    ++L  N                   K D++    
Sbjct: 258 LKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGI 317

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                  EL L    L+++P  I +  +++ L L  N I +L     +  +L+ L L+ N
Sbjct: 318 GNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGN 377

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
            I   PD I  +L  L  L L  N L ++P D   ++  L ILDL  N I+ LP+     
Sbjct: 378 NINRLPDDI-GNLKKLKELYLWKNNLEKLP-DSIGNLTSLSILDLGRNQISELPD--TIG 433

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L ++++L L + +L   P  I  LQ +  L L +N ++ +PEG  NLT+L +L + +N 
Sbjct: 434 NLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNR 493

Query: 533 ISALP 537
           +  LP
Sbjct: 494 LRCLP 498



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 221/473 (46%), Gaps = 69/473 (14%)

Query: 57  IEKLKEDLRNLPLLTVLNVSH-NKLSELPAAIGEL----HM------------------- 92
           I  L E + NL  L  LN+S  ++L ++P AIG L    H+                   
Sbjct: 144 ITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGA 203

Query: 93  ---LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
              L  L ++ +SI+ IP+ IG+ + L   D S N+L  LP S+G   NL       N I
Sbjct: 204 QSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNI 263

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
             LP  +     ++ L++  NK                       LL    E+IG L  L
Sbjct: 264 AILPISIEHLVNLTYLNLYSNK-----------------------LLRNRSESIGKLINL 300

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             L+L  N++  +   I     L E ++GNN L++LP  +GKL+KL  L L +N++ +  
Sbjct: 301 NYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLT 360

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L  L  L+L+ N+++ LP +IG +  L++L L  N L  L  S+ N  + ++L  
Sbjct: 361 KNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILD- 419

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               L  N+ SE   T  +L  +        ++L L    L+ +P  I     I+ L L 
Sbjct: 420 ----LGRNQISELPDTIGNLHNI--------EKLDLYKNRLTCLPETISNLQSISHLYLQ 467

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
           RN I+ LP  + +  +L+ L +  N+++  P++I    ++L  LK+ NN LR +P +   
Sbjct: 468 RNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRNNRLRCLP-ESIG 526

Query: 449 DIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           ++  L  LD + N+ + +P+N    ++ +L+ L L +  L +  TD+  LQ +
Sbjct: 527 NLVNLNSLDCTNNLLTDIPKN--IGNITNLKTLNLTKNPLTDL-TDLSVLQTI 576



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 137/298 (45%), Gaps = 48/298 (16%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L +N I  L ++  NL  L  LN++ N ++ LP  IG L  LK L +  N++ K+PD 
Sbjct: 349 LQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDS 408

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG+ T+L   D   NQ+ ELP ++G   N+       N +T LPE +++   +S L ++ 
Sbjct: 409 IGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQR 468

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG- 228
           N + +L                        PE +G+L+ L +L +  NR+  +P SI   
Sbjct: 469 NYIKLL------------------------PEGMGNLTNLKKLKIWNNRLRCLPESIGNL 504

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L    + NN L  LP  +G L  L +LD         C             +NN L+
Sbjct: 505 AANLQSLKIRNNRLRCLPESIGNLVNLNSLD---------C-------------TNNLLT 542

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPENEDSEASTTK 345
            +P  IG +T L+ L LT NPL  L    V    P L + +LR  LP    ++ S  K
Sbjct: 543 DIPKNIGNITNLKTLNLTKNPLTDLTDLSVLQTIPNLTVHWLRVFLPRRYWTKVSDWK 600


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 202/413 (48%), Gaps = 40/413 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 85  NLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKV 144

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + + L       N++ ELPS++G  +NL+    S+N +  LP ++ +C  ++ L
Sbjct: 145 VGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTAL 204

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+L+ L+RL L  N++ SIP S
Sbjct: 205 DLQHNDLL------------------------DIPETIGNLANLMRLGLRYNQLTSIPVS 240

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  L+ 
Sbjct: 241 LKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMVELNF 300

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             NSL+ LP +I  +  L  L+L+ N L+ + +++ N      LK LR    E    E+ 
Sbjct: 301 GTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGN------LKKLRVLDLEENRLESL 354

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            ++  L+    +L + S +       L+++P  I     +T L +  N++Q LP E+ + 
Sbjct: 355 PSEIGLLHDLQKLILQSNQ-------LTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTL 407

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            +L++L ++ N         L    +L+ + ++N PL  +P +     P L I
Sbjct: 408 ENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVI 460



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 179/371 (48%), Gaps = 31/371 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 112 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSHLTML 158

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+AIG L  L +LD+S N +  +P EIG+   L   D   N L ++P ++
Sbjct: 159 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 218

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 219 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 278

Query: 194 NLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N  +  P       + ++ L+   N +  +P  I    +L    + NN L  +P  +G L
Sbjct: 279 NAFHSYPSGGPAQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNL 338

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  LDL  N+L+    E   L  L  L L +N L+ LP  IG +T L  L +  N L+
Sbjct: 339 KKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQ 398

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNL 369
            L         P  +  L     EN +S        L+ +   L++      +S+E   L
Sbjct: 399 FL---------PEEIGTL-----ENLESLYINDNASLVKLPYELALCQNLAIMSIENCPL 444

Query: 370 SAIPSEIWEAG 380
           SA+P E+   G
Sbjct: 445 SALPPEVVGGG 455



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 162/332 (48%), Gaps = 17/332 (5%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L     
Sbjct: 42  RLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPD 101

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N     +L   
Sbjct: 102 SLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLS-- 159

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L EN+  E  +    L+ + T        L L   +L  +P+EI     +T LDL  
Sbjct: 160 ---LRENKIHELPSAIGHLVNLTT--------LDLSHNHLKHLPAEIGNCVNLTALDLQH 208

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N + ++P  + + A+L  L L  N++   P + L + + +    ++ N + Q+P      
Sbjct: 209 NDLLDIPETIGNLANLMRLGLRYNQLTSIPVS-LKNCTHMDEFNVEGNGISQLPDGLLAS 267

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L  + LS N   S P   P +   ++ EL      L + P DI  LQ L IL LS N
Sbjct: 268 LSNLTTITLSRNAFHSYPSGGP-AQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNN 326

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L+ IP    NL  L  LDL +N + +LP E+
Sbjct: 327 VLKRIPNTIGNLKKLRVLDLEENRLESLPSEI 358



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 205/452 (45%), Gaps = 67/452 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 40  IQRLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 99

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL+ +  ++I     LT L    N +  + + + +LS L  L
Sbjct: 100 PDSLQNLKQLKVLDLRHNKLSEIP-DVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTML 158

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +PS+I    +L    + +N L  LPAE+G                  CV  
Sbjct: 159 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGN-----------------CV-- 199

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+ LDL +N L  +P  IG +  L +L L  N L ++  SL N             
Sbjct: 200 ---NLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSLKN------------- 243

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNS 391
                      T  D             E ++EG  +S +P  +  +   +T + LSRN+
Sbjct: 244 ----------CTHMD-------------EFNVEGNGISQLPDGLLASLSNLTTITLSRNA 280

Query: 392 IQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
               P    +   ++  L    N +   PD I   L +L  L L NN L+++P +   ++
Sbjct: 281 FHSYPSGGPAQFTNMVELNFGTNSLTKLPDDI-HCLQNLEILILSNNVLKRIP-NTIGNL 338

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L++LDL  N + SLP       L  LQ+L L+  QL   P  I  L  L  L + +N+
Sbjct: 339 KKLRVLDLEENRLESLPSE--IGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENN 396

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           LQ +PE    L +L  L ++DN ++  LP EL
Sbjct: 397 LQFLPEEIGTLENLESLYINDNASLVKLPYEL 428



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 41/264 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS +S++ +PP +   T+L +  L GN + +L         P  +  L +        
Sbjct: 43  LDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSL---------PVEIGCLSNL------- 86

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               K L+L   +L+++P  +    ++  LDL  N + E+P  +
Sbjct: 87  --------------------KTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVI 126

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               +L TL L  N+IK   D  L +LS L+ L L  N + ++PS     +  L  LDLS
Sbjct: 127 YKLHTLTTLYLRFNRIKVVGDN-LKNLSHLTMLSLRENKIHELPS-AIGHLVNLTTLDLS 184

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           +N +  LP      +  +L  L L+   L + P  I  L  L  L L  N L SIP   K
Sbjct: 185 HNHLKHLPAE--IGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSLK 242

Query: 519 NLTSLTELDLSDNNISALPPELVS 542
           N T + E ++  N IS LP  L++
Sbjct: 243 NCTHMDEFNVEGNGISQLPDGLLA 266


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 223/511 (43%), Gaps = 48/511 (9%)

Query: 33  DEAGEG-----DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           D +G+G     D   +  +L  L L+HN +  L E    L  L  L++S  +L+  P + 
Sbjct: 71  DASGQGLSVVPDGIGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPESF 130

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            EL  L+ L +S   ++  P+  G    L     SS QL  LP S  + +NL     SN 
Sbjct: 131 SELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNT 190

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LPE       +  LD+ G +LT L  +       L  L  S   L  +PE+ G L 
Sbjct: 191 QLITLPESFDKLVNLEYLDLSGTQLTTLPES-FDKLVNLEYLDLSGTQLTDLPESFGELV 249

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L   ++  +P S     +L   Y+ N  L+ LP   G+L  L  L L + QL +
Sbjct: 250 NLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTD 309

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                 +L  L  L+LS+  L+ LP   G++  L++L L+   L                
Sbjct: 310 LPESFDKLVNLQRLNLSSTQLTALPESFGELVNLQRLYLSNTQL---------------- 353

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               + LPE+ D                  V  ++L L  + L+A+P    +   +  L 
Sbjct: 354 ----TALPESFDK----------------LVNLQDLYLSNIQLTALPESFDKLVNLQHLY 393

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           LS   +  LP       +LQ L LS  ++   P++    L +L  L L +  L  +P + 
Sbjct: 394 LSDTQLTALPESFDKLVNLQHLYLSDTQLTALPESF-GELVNLQHLNLSSTQLTALP-ES 451

Query: 447 FKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           F ++  LQ L+L S  + +LPE+  F  L +LQ L L   QL   P     L  L+ LDL
Sbjct: 452 FGELVNLQHLNLSSTQLTTLPES--FGELVNLQNLDLSNTQLTTLPKSFGELVNLQNLDL 509

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           S     ++PE F  L +L  LDLS+N + +L
Sbjct: 510 SNTQFTTLPESFDELVNLKTLDLSNNQLRSL 540



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 196/457 (42%), Gaps = 44/457 (9%)

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           S+D S   +  +PD IG    L   D S NQL  LP S G+ +NL     S   +T+ PE
Sbjct: 69  SIDASGQGLSVVPDGIGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPE 128

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
             ++   + +L +   +L                           PE+ G L  L  L L
Sbjct: 129 SFSELVNLERLYLSSTQLVT------------------------FPESFGKLVNLQHLYL 164

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
              +++++P S     +L   Y+ N  L  LP    KL  L  LDL   QL        +
Sbjct: 165 SSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDK 224

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLR 330
           L  L  LDLS   L+ LP   G++  L+ L L+   L  L  S   LVN     L     
Sbjct: 225 LVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQL 284

Query: 331 SRLPENEDSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEAGE 381
           + LPE+     +   +DL    T+L+         V  + L+L    L+A+P    E   
Sbjct: 285 TDLPESFGELVNL--QDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPESFGELVN 342

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L LS   +  LP       +LQ L LS  ++   P++    L +L  L L +  L  
Sbjct: 343 LQRLYLSNTQLTALPESFDKLVNLQDLYLSNIQLTALPESF-DKLVNLQHLYLSDTQLTA 401

Query: 442 VPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P + F  +  LQ L LS   + +LPE+  F  L +LQ L L   QL   P     L  L
Sbjct: 402 LP-ESFDKLVNLQHLYLSDTQLTALPES--FGELVNLQHLNLSSTQLTALPESFGELVNL 458

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + L+LS   L ++PE F  L +L  LDLS+  ++ LP
Sbjct: 459 QHLNLSSTQLTTLPESFGELVNLQNLDLSNTQLTTLP 495



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 190/445 (42%), Gaps = 62/445 (13%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
            D+++   R    L LSN  L  +P    ++FD+          V+L+ L L+   +  L
Sbjct: 176 FDKLVNLER----LYLSNTQLITLP----ESFDKL---------VNLEYLDLSGTQLTTL 218

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E    L  L  L++S  +L++LP + GEL  L+ L +S   +  +P+  G    L +  
Sbjct: 219 PESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLY 278

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+ QL +LP S G  +NL D   SN  +T LPE       + +L++   +LT L     
Sbjct: 279 LSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTAL----- 333

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                              PE+ G L  L RL L   ++ ++P S     +L + Y+ N 
Sbjct: 334 -------------------PESFGELVNLQRLYLSNTQLTALPESFDKLVNLQDLYLSNI 374

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L+ALP    KL  L  L L   QL        +L  L  L LS+  L+ LP   G++  
Sbjct: 375 QLTALPESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQLTALPESFGELVN 434

Query: 300 LRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           L+ L L+   L  L  S   LVN     L     + LPE        +  +L+ +     
Sbjct: 435 LQHLNLSSTQLTALPESFGELVNLQHLNLSSTQLTTLPE--------SFGELVNL----- 481

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              + L L    L+ +P    E   +  LDLS      LP       +L+TL LS N+++
Sbjct: 482 ---QNLDLSNTQLTTLPKSFGELVNLQNLDLSNTQFTTLPESFDELVNLKTLDLSNNQLR 538

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQ 441
              +     +S L  L+L+ NPL +
Sbjct: 539 SL-NLCEKFVSRLQELQLEGNPLAE 562



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 26/217 (11%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + + + V+LQ L L+   +  L E    L  L  L +S  +L+ LP + GEL  L+ L++
Sbjct: 381 ESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQLTALPESFGELVNLQHLNL 440

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S   +  +P+  G    L   + SS QL  LP S G  +NL +   SN  +T+LP+   +
Sbjct: 441 SSTQLTALPESFGELVNLQHLNLSSTQLTTLPESFGELVNLQNLDLSNTQLTTLPKSFGE 500

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+   + T L                        PE+   L  L  LDL  N+
Sbjct: 501 LVNLQNLDLSNTQFTTL------------------------PESFDELVNLKTLDLSNNQ 536

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           + S+         L E  +  N L+   +E+ ++ KL
Sbjct: 537 LRSLNLCEKFVSRLQELQLEGNPLAE--SEIKRIEKL 571


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 200/415 (48%), Gaps = 23/415 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D + L L+ + +  L +++  L  L  L +++N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L+ LD+  N +  +P EIG    L   +   N+L  LP  +G+  NL       
Sbjct: 90  IGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE +     +  L+++ NKLT+L    I     L  L +  N L   P+ IG L
Sbjct: 150 NKLTILPEKIGQLQNLQVLNLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQL 208

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  NR+ ++   +    +L    + +N L+ LP E+G+L KL  L+L+  QLK
Sbjct: 209 QKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLK 268

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL+ L  L+L+   L+ LP EIG+++ L+KL L GN L TL   +        
Sbjct: 269 TLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQ 322

Query: 326 LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LK L+   L  N         E L  + T        L LEG  ++  P EI +   + +
Sbjct: 323 LKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LYLEGNQITTFPKEIGQLQNLQE 374

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+L  N +  LP E+    +LQ L L  N++   P  +   L  L  L L NNP+
Sbjct: 375 LNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEV-GQLQKLRKLNLYNNPI 428



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 190/423 (44%), Gaps = 64/423 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S ++L  L   +G+  NL     + N +T+LP ++     +  LD+  N+LT+L   
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTIL--- 109

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ IG L  L  L+L  NR+  +P  +    +L    + 
Sbjct: 110 ---------------------PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLD 148

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L+ LP ++G+L  L  L+L  N+L     +  QL+ L +L+   N L+  P EIG++
Sbjct: 149 LNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQL 208

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L++L L  N L TLR  +V      +L  +         S   TT    I    +L  
Sbjct: 209 QKLQELNLGFNRLTTLREEVVQLQNLQILDLI---------SNPLTTLPKEIGQLQKL-- 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             +EL+L G+ L  +P  I +   +  L+L+   +  LP E+   + LQ L L  N++  
Sbjct: 258 --QELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTT 315

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P+ I   L  L  L L NNPLR +P    K+I  LQ                      L
Sbjct: 316 LPEEI-GQLKKLQELYLGNNPLRTLP----KEIEQLQ---------------------KL 349

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           Q LYL   Q+   P +I +LQ L+ L+L  N L ++P+    L +L EL+L  N ++ LP
Sbjct: 350 QTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLP 409

Query: 538 PEL 540
            E+
Sbjct: 410 KEV 412



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 41/266 (15%)

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           +L+LS + L+ L  EIGK+  L+KL L  N L TL +                       
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNE---------------------- 89

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     I     L V    L L    L+ +P EI +   +  L+L  N +  LP E
Sbjct: 90  ----------IGQLQNLQV----LDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDE 135

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +    +LQ L L  NK+   P+ I   L +L  L LD N L  +P +    +  LQIL+ 
Sbjct: 136 VGQLQNLQVLNLDLNKLTILPEKI-GQLQNLQVLNLDLNKLTILP-EKIGQLQNLQILNS 193

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
             N + + P+      L  LQEL L   +L     ++++LQ L+ILDL  N L ++P+  
Sbjct: 194 QGNQLTTFPKE--IGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L  L EL+L    +  LP  ++ +
Sbjct: 252 GQLQKLQELNLYGIQLKTLPQGIIQL 277



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++  +   LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++
Sbjct: 318 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNL 377

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
            FN +  +P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 378 GFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 211/445 (47%), Gaps = 52/445 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 120 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSHLTML 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+AIG L  L +LD+S N +  +P EIG+   L   D   N L ++P ++
Sbjct: 167 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 227 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 286

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N  +  P       + +  +++  N+I  I   I S    L +  M  NAL++LP ++G 
Sbjct: 287 NAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 346

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +++  L+  +N L +   +  C   L +L LSNN L  +P  IG +  LR L L  N L
Sbjct: 347 WTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRL 406

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L S +       LL  L                              ++L L+   L+
Sbjct: 407 ESLPSEI------GLLHDL------------------------------QKLILQSNQLT 430

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           ++P  I     +T L +  N++Q LP E+ +  +L++L ++ N         L    +L+
Sbjct: 431 SLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLVKLPYELALCQNLA 490

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQI 455
            + ++N PL  +P +     P L I
Sbjct: 491 IMSIENCPLSALPPEVVSGGPSLVI 515



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 210/462 (45%), Gaps = 83/462 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 93  NLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKV 152

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + + L       N++ ELPS++G  +NL+    S+N +  LP ++ +C  ++ L
Sbjct: 153 VGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTAL 212

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+L+ L+RL L  N++ SIP S
Sbjct: 213 DLQHNDLL------------------------DIPETIGNLANLMRLGLRYNQLTSIPVS 248

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y               +
Sbjct: 249 LKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINM 308

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---S 315
           E  Q+             L+ L++  N+L+ LP +IG  T + +L    N L  L     
Sbjct: 309 EHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 368

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            L N     L   +  R+P            + I    +L V    L LE   L ++PSE
Sbjct: 369 CLQNLEILILSNNVLKRIP------------NTIGNLKKLRV----LDLEENRLESLPSE 412

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL- 434
           I    ++ KL L  N +  LP  +    +L  L +  N ++  P+ I T L +L  L + 
Sbjct: 413 IGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGT-LENLESLYIN 471

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLP 475
           DN  L ++P +          L L  N+A +  EN P S+LP
Sbjct: 472 DNASLVKLPYE----------LALCQNLAIMSIENCPLSALP 503



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 222/481 (46%), Gaps = 51/481 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 48  IQRLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL+ +  ++I     LT L    N +  + + + +LS L  L
Sbjct: 108 PDSLQNLKQLKVLDLRHNKLSEIP-DVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTML 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +PS+I    +L    + +N L  LPAE+G    L  LDL  N L +     
Sbjct: 167 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 226

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLK 327
             L  L  L L  N L+ +P  +   T + +  + GN +      L +SL N  T  L +
Sbjct: 227 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 286

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
                 P    ++ +             +VTS  +++E   +  I   I+  A  +TKL+
Sbjct: 287 NAFHSYPSGGPAQFT-------------NVTS--INMEHNQIDKIQYGIFSRAKGLTKLN 331

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N++  LP ++ +   +  L    N +   PD I   L +L  L L NN L+++P + 
Sbjct: 332 MKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI-HCLQNLEILILSNNVLKRIP-NT 389

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N + SLP       L  LQ+L L+  QL   P  I  L  L  L +
Sbjct: 390 IGNLKKLRVLDLEENRLESLPSE--IGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSV 447

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNN------------------------ISALPPELV 541
            +N+LQ +PE    L +L  L ++DN                         +SALPPE+V
Sbjct: 448 GENNLQFLPEEIGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVV 507

Query: 542 S 542
           S
Sbjct: 508 S 508


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 211/478 (44%), Gaps = 51/478 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  IG+L  L+ L++ +N +  +P EIG    L + D   NQL   P+
Sbjct: 52  VLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +     L     S N +  LP ++     +  L +  NKLT      I     L +L  
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE-IGQLQNLQKLWL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  LDL  N+  ++P  I    +L    + NN L+  P E+G+
Sbjct: 171 SENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQ 230

Query: 252 LSKLGTLDLHSN--QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL-LLTGN 308
           L  L  L+L  N   LKE          S LDL          E+ +    R L L    
Sbjct: 231 LQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLR---------EVAENGVYRNLNLAQEE 281

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           PL+    SL                 E +D   S  K           V  K  +L G+N
Sbjct: 282 PLKVFELSL-----------------EYKDFSQSFPK-----------VILKFRNLRGLN 313

Query: 369 L-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L     S +P EI     +  L L  N ++ +P E+    +L+ L L  N+++  P  I 
Sbjct: 314 LYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI- 372

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L +L  L L  N L+  P++  + +  LQ LDLS N   + P+      L +LQ L L
Sbjct: 373 GQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNL 429

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +R QL     +I +L+ L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+
Sbjct: 430 QRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 487



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 194/479 (40%), Gaps = 81/479 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T L    I     L  L    
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLVN 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQN--------RILSI----------------------- 222
           N L   P+ IG L  L  L+L  N        RI  +                       
Sbjct: 219 NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 278

Query: 223 ---------------------PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
                                P  I    +L    + +   S LP E+ +L  L  L L 
Sbjct: 279 QEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG 338

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N LK    E  QL+ L  L+L  N L  LP EIG++  L+KL L  N L+         
Sbjct: 339 LNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF------- 391

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
             PA ++ L+     +      TT    I     L      L+L+   L+ + +EI +  
Sbjct: 392 --PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT----LNLQRNQLTNLTAEIEQLK 445

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            + +LDL+ N    LP E+     LQTL L  N++   P  I   L +L  L L NN L
Sbjct: 446 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI-GQLQNLQWLYLQNNQL 503



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 175/419 (41%), Gaps = 45/419 (10%)

Query: 45  VDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           V+LQKL    L+ N +  L  ++  L  L  L +  NKL+  P  IG+L  L+ L +S N
Sbjct: 114 VELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG    L   D   NQ   LP  +G+  NL      NN +T  P+++     
Sbjct: 174 RLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQN 233

Query: 162 MSKLDVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASK 193
           +  L++  N L+                    V  N +  +  +  E         +  K
Sbjct: 234 LQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYK 293

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           +     P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L 
Sbjct: 294 DFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLK 353

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T
Sbjct: 354 NLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT 413

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
               +        L   R++L  N  +E    K              +EL L     + +
Sbjct: 414 FPKEIGKLENLQTLNLQRNQLT-NLTAEIEQLK------------NLQELDLNDNQFTVL 460

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           P EI +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 461 PKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 519


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 120 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 167 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 227 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 286

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 287 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 345

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 346 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 405

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 406 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 429

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 430 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 489

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 490 KYLNIDKCPLSTIPPE 505



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 219/452 (48%), Gaps = 20/452 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 48  IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 108 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 167 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 226

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 227 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 282

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 283 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 335

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 336 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 393

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 394 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 451

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           LQ +PE   +L SL  L ++ N  +  LP EL
Sbjct: 452 LQFLPEEIGSLESLENLYINQNPGLEKLPFEL 483


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 205/436 (47%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 237 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 344 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 404 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 462

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 463 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 522

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 523 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 546

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 547 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 606

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 607 KYLNIDKCPLSTIPPE 622



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 220/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  + + +I     LT L    N +  + + +  L  L  L
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPS-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 344 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 399

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 400 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 452

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 453 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 510

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 511 RRLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 568

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 569 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 601



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 197/419 (47%), Gaps = 44/419 (10%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT +P  + +C  +++L +  NK+  L    I    
Sbjct: 151 QDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPE-IGCLV 209

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +PE++ + S+L  LDL  N++  IPS I    SL   Y+  N ++A
Sbjct: 210 SLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITA 269

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 270 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 329

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N         L+S                L+ +  R +       
Sbjct: 330 DLQHNELLDIPDSIGN---------LKS----------------LVRLGMRYN------- 357

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAI 422
                LS++P+ +     + + ++  N I +LP   L+S + L T+ LSRN+   +P   
Sbjct: 358 ----RLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGG 413

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
               +++  + L++N + ++P   F     L  L++  N + +LP +    +  ++ EL 
Sbjct: 414 PAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLD--IGTWVNMVELN 471

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L    L++ P DI+ LQ L IL LS N L+ IP    NL  L  LDL +N I  LP E+
Sbjct: 472 LATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEI 530


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 182/387 (47%), Gaps = 29/387 (7%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VLN+S+  L+  P  I +   LK LD+S N    +P EIG    L + 
Sbjct: 43  LNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQEL 102

Query: 120 DCS-SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           + S +N   +LP  +GR  NL     S N +T+LP+++     + +L++  N L  L   
Sbjct: 103 NLSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQE 162

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L +L  S N L  +P+ IG L +L  L ++ NR+  +P  I    +L E  + 
Sbjct: 163 -IGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLY 221

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N+L+ LP E+G+L K   L LH NQL       C+L+ L  + L  N L+ LP EIG++
Sbjct: 222 DNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQL 281

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L++L L+ N L+TL   +                   E               T L  
Sbjct: 282 QNLQELHLSSNQLKTLPKEI-------------------EKLHNLQILNLNNNELTALPK 322

Query: 358 TSKEL-SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
              +L +L G+N     L+ +P EI +   +  LDLS N +  LP E+     L +L LS
Sbjct: 323 EIGQLQNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLS 382

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNP 438
            N +  +P  I   L +L  L+L   P
Sbjct: 383 GNSLTSFPKEI-GKLQNLKFLRLRGIP 408



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 143/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  L +++  L  L  LN+S N L +LP  IG L  L+ L++S N +  
Sbjct: 122 NLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTT 181

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     + N+L  LP  +G+  NL +    +N +T+LPE++    K  +L
Sbjct: 182 LPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQL 241

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L   L      L  +   +N L  +P+ IG L  L  L L  N++ ++P  
Sbjct: 242 VLHENQLTTLPQGL-CKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKE 300

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ALP E+G+L  L  L+L  N+L     E  QL+ +  LDLS+
Sbjct: 301 IEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSD 360

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L  L L+GN L
Sbjct: 361 NQLTTLPSEIGQLKKLHSLNLSGNSL 386



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 161/366 (43%), Gaps = 39/366 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS-NNCITS 151
           ++ L++S+  +   P  I     L   D S N  K LP  +GR  NL +   S NN    
Sbjct: 53  VRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPID 112

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP+++     + +L++ GN+LT L                        P+ I  L  L  
Sbjct: 113 LPQEIGRLQNLERLNLSGNRLTTL------------------------PQEIWRLQNLQE 148

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L  N ++ +P  I    +L +  +  N L+ LP E+G+L KL  L ++ N+L     E
Sbjct: 149 LNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKE 208

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L L +NSL+ LP EIG++   ++L+L  N L TL   L        +   +
Sbjct: 209 IGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQ 268

Query: 331 SRLPE--NEDSEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEA 379
           +RL     E  +    +E L   + +L    KE+          L    L+A+P EI + 
Sbjct: 269 NRLTSLPQEIGQLQNLQE-LHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQL 327

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  L+L  N +  LP E+    +++ L LS N++   P  I   L  L  L L  N L
Sbjct: 328 QNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEI-GQLKKLHSLNLSGNSL 386

Query: 440 RQVPSD 445
              P +
Sbjct: 387 TSFPKE 392



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 167/351 (47%), Gaps = 18/351 (5%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-NNALSALPAELG 250
           S   L   P+ I     L  LDL +N   ++P  I    +L E  +  NN    LP E+G
Sbjct: 59  SYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQEIG 118

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L+L  N+L     E  +L+ L  L+LS+N L  LP EIG++  L +L L+GN 
Sbjct: 119 RLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNR 178

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L TL   +        LK L   L  N +      KE  I     L    KEL L   +L
Sbjct: 179 LTTLPQEI------GQLKKL-EWLHVNHNRLTVLPKE--IGQLQNL----KELLLYDNSL 225

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P EI +  +  +L L  N +  LP  L    +L+ + L +N++   P  I   L +L
Sbjct: 226 TTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEI-GQLQNL 284

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L +N L+ +P +  K   +  +   +  + +LP+      L +L  L L+  +L  
Sbjct: 285 QELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKE--IGQLQNLYGLNLKLNKLTI 342

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +LQ +R LDLS N L ++P     L  L  L+LS N++++ P E+
Sbjct: 343 LPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEI 393



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 192/422 (45%), Gaps = 63/422 (14%)

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           + + + T +   + S   L   P  + +  NL     S N   +LP+++     + +L++
Sbjct: 45  EALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNL 104

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N      NN I                  +P+ IG L  L RL+L  NR+ ++P  I 
Sbjct: 105 SFN------NNPID-----------------LPQEIGRLQNLERLNLSGNRLTTLPQEIW 141

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
              +L E  + +N L  LP E+G+L  L  L+L  N+L     E  QL+ L  L +++N 
Sbjct: 142 RLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNR 201

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L+ LP EIG++  L++LLL  N L TL   +       L K+ +  L EN+    +T  +
Sbjct: 202 LTVLPKEIGQLQNLKELLLYDNSLTTLPEEI-----GQLQKFKQLVLHENQ---LTTLPQ 253

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L  +        + + L    L+++P EI +   + +L LS N ++ LP E+    +LQ
Sbjct: 254 GLCKLQN-----LERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQ 308

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            L L+ N++   P  I   L +L  L L  N L  +P    K+I  LQ            
Sbjct: 309 ILNLNNNELTALPKEI-GQLQNLYGLNLKLNKLTILP----KEIGQLQ------------ 351

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                    ++++L L   QL   P++I +L++L  L+LS NSL S P+    L +L  L
Sbjct: 352 ---------NMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNLKFL 402

Query: 527 DL 528
            L
Sbjct: 403 RL 404



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N ++ L +++  L  L +LN+++N+L+ LP  IG+L  L  L++  N +  
Sbjct: 283 NLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTI 342

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    +   D S NQL  LPS +G+   L     S N +TS P+++     +  L
Sbjct: 343 LPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNLKFL 402

Query: 166 DVEG 169
            + G
Sbjct: 403 RLRG 406



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           L +   ++ L LS   +  +P  I     +L  L L  N  + +P +    +  LQ L+L
Sbjct: 47  LKNPTDVRVLNLSYRYLTTFPKGI-EKFQNLKHLDLSENFFKTLPQE-IGRLQNLQELNL 104

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           S+N   +        L +L+ L L   +L   P +I RLQ L+ L+LS N L  +P+   
Sbjct: 105 SFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIG 164

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L +L +L+LS N ++ LP E+
Sbjct: 165 RLQNLEQLNLSGNRLTTLPQEI 186


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 175/370 (47%), Gaps = 41/370 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L  N++  +P  I    +L       N L+  P E+G+
Sbjct: 156 --------PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L+L  N+L     E  QL+ L +LDL +N L+ LP EIG+++ L+KL L GN L
Sbjct: 208 LQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
            TL   +        LK L+   L  N         E L  + T        L LEG  +
Sbjct: 268 TTLPEEI------GQLKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LYLEGNQI 313

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           +  P EI +   + +L+L  N +  LP E+    +LQ L L  N++   P  +   L  L
Sbjct: 314 TTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEV-GQLQKL 372

Query: 430 SCLKLDNNPL 439
             L L NNP+
Sbjct: 373 RKLNLYNNPI 382



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 23/291 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL       N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLS---------NNLIASWTMLT----ELIASKNL---------LNGMPETI 203
           + +GN+LT              L   +  LT    E++  +NL         L  +P+ I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G LS+L +L L+ N++ ++P  I     L E Y+GNN L  LP E+ +L KL TL L  N
Sbjct: 252 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 311

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           Q+  +  E  QL+ L  L+L  N L+ LP EIG++  L++L L  N L TL
Sbjct: 312 QITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATL 362



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 177/360 (49%), Gaps = 37/360 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEV---------YKNFDEAGE-GDKWWEAVDLQKLILAH 54
           L+  + +  LNLS   L  +  E+         Y N+++     ++  +  +LQ L L  
Sbjct: 44  LQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYS 103

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L +++  L  L VLN+  N+L+ LP  +G+L  L+ L++  N +  +P++IG   
Sbjct: 104 NELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQ 163

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L   +   N+L  LP  +G+  NL    +  N +T+ P+++    K+ +L++  N+LT 
Sbjct: 164 NLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTT 223

Query: 175 LSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ ++P  I     L 
Sbjct: 224 LREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQ 281

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----------------- 276
           E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+                 
Sbjct: 282 ELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ 341

Query: 277 -------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  L  L+L  N L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 342 EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 401



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 177/367 (48%), Gaps = 20/367 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D + L L+ + +  L +++  L  L  L +++N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L+ LD+  N +  +P EIG    L   +   N+L  LP  +G+  NL       
Sbjct: 90  IGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE +     +  L+++ NKLT+L    I     L  L +  N L   P+ IG L
Sbjct: 150 NKLTILPEKIGQLQNLQVLNLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQL 208

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  NR+ ++   +    +L    + +N L+ LP E+G+LSKL  L L+ NQL 
Sbjct: 209 QKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLT 268

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  QL +L  L L NN L  LP EI ++  L+ L L GN + T          P  
Sbjct: 269 TLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF---------PKE 319

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           +  L++    N      TT    I     L    +EL+LE   L+ +P E+ +  ++ KL
Sbjct: 320 IGQLQNLQELNLGFNQLTTLPQEIGQLQNL----QELNLEFNQLATLPKEVGQLQKLRKL 375

Query: 386 DLSRNSI 392
           +L  N I
Sbjct: 376 NLYNNPI 382



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 172/391 (43%), Gaps = 64/391 (16%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +      L++ G+KL  LS   I     L +L  + N L  +P  IG L  L 
Sbjct: 39  NLTEALQNPKDARILNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LDL+ N +  +P  I    +L    +G N L+ LP E+G+L  L  L+L  N+L     
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPE 157

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL+ L VL+L  N L+ LP +IG++  L+ L   GN L T    +  G    L    
Sbjct: 158 KIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI--GQLQKL---- 211

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                                         +EL+L    L+ +  E+ +   +  LDL  
Sbjct: 212 ------------------------------QELNLGFNRLTTLREEVVQLQNLQILDLIS 241

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+
Sbjct: 242 NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KE 296

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N 
Sbjct: 297 IEQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 335

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P+    L +L EL+L  N ++ LP E+
Sbjct: 336 LTTLPQEIGQLQNLQELNLEFNQLATLPKEV 366


>gi|388329668|gb|AFK29223.1| scribbled, partial [Drosophila buzzatii]
          Length = 499

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 171/352 (48%), Gaps = 35/352 (9%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK----------------------NFDEAGEGD 39
           + IL+ +RT   L L    +RD+P   ++                      NF+   E D
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELD 89

Query: 40  KWWEAV--------DLQKLILAH---NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
                +         LQ L +A    N I KL      L  LTVL ++   L+ LPA  G
Sbjct: 90  VSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFG 149

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+SL++  N +  +P+ I   T L + D   N++++LP  LG   NL +    +N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQ 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP +L   +K++ LDV  N+L  L N  I     LT+L  ++NLL  +P+ I  LSR
Sbjct: 210 LQRLPPELGLLTKLTYLDVSENRLEELPNE-IGGMVSLTDLDLAQNLLETLPDGISKLSR 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L QNR+  +  ++  C ++ E  +  N LS LPA +G ++KL  L++  N L+  
Sbjct: 269 LTILKLDQNRLQRLNETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  L  SLVN
Sbjct: 329 PLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 181/378 (47%), Gaps = 38/378 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPAD----------- 147

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 148 -------------FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
               +L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N
Sbjct: 195 GYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGNMTKLS----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QTLILSRNKIKDWPDAIL 423
             L +S N++   P +++
Sbjct: 362 HVLDVSGNQLLYLPYSLV 379



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 132/240 (55%), Gaps = 1/240 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ ++  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGISKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N  + +   + ELI ++N L+ +P +IG++++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N 
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQ 392



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 164/356 (46%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETIS-----QLTKLKRLDLGDNE-------IEDLPPYLGYLP-NLHELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I +
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI-S 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NETLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I  + +L  L++ +N+L+ +P      ++L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+       G        V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEI------GG-------MVSLTDLDLAQNLLETLPDGISKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG+ T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LNRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 401 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 519

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 520 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 543

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 544 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 604 KYLNIDKCPLSTIPPE 619



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 396

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 397 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 449

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 450 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 507

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 508 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 565

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 566 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 598


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 225/507 (44%), Gaps = 66/507 (13%)

Query: 36  GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           G  D+ WE  DL++L L  N++++L ++++ L  LT L +  N L  LP  +G+L  L+S
Sbjct: 37  GLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHLES 96

Query: 96  LDVSFNSIMKIP-DEIGSATALVKFDCSSNQLKELPSS-LGRCLNLSDFKASNNCITSLP 153
           LDVS N   KIP + +     L      +  L ++P   L   LNL     + N +  LP
Sbjct: 97  LDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLP 156

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
                 +K+ +L +  N  + L                        P  + SLS L  LD
Sbjct: 157 IYTVRLNKLKELHLRNNNFSTL------------------------PVHVCSLSALTTLD 192

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N++  +P+ I    +L E Y+ NN    LP +L  L  +  L+LH N +KE   + C
Sbjct: 193 LEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDIC 252

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L +L  ++ SNN +  LP E+G +  L  L    N L++L  +         + + ++R
Sbjct: 253 RLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNR 312

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
             E   S         + M   L+V    L+++  NL  IP E+    ++ +L LS N  
Sbjct: 313 FEEMPVS---------LCMLGNLAV----LAMDDNNLYHIPKEVANLRKLKELGLSGNVF 359

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
           ++ P  + +  SL+ L L ++                         L  VPS     +  
Sbjct: 360 EKFPEAICNLPSLEKLFLGQDH---------------------GQQLTSVPST-ISKLTS 397

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           LQ L L YN + +LP++   S LP L  L      L++ P  I  L+ L+ L L  N L 
Sbjct: 398 LQDLCLEYNALTTLPDS--ISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLT 455

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPP 538
           ++P  F  LT+L EL + D    A PP
Sbjct: 456 ALPSDFDFLTTLKELRI-DAEKFAYPP 481



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 38/305 (12%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAVDLQ--------KLILAHNNIEKLKE 62
           +L+L    L D+PNE+ +  N  E    + ++  + +Q         L L  N+++++  
Sbjct: 190 TLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPP 249

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  +N S+NK+ +LP  +G L  L+ L    N +  +P   G    L   D +
Sbjct: 250 DICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFA 309

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+ +E+P SL    NL+     +N +  +P+++A+  K+ +L + G             
Sbjct: 310 QNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLKELGLSG------------- 356

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDL---HQNRILSIPSSISGCCSLAEFYMGN 239
                      N+    PE I +L  L +L L   H  ++ S+PS+IS   SL +  +  
Sbjct: 357 -----------NVFEKFPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEY 405

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           NAL+ LP  + +L  L  L  H N L++     C+L+ L  L L NN L+ LP +   +T
Sbjct: 406 NALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLT 465

Query: 299 TLRKL 303
           TL++L
Sbjct: 466 TLKEL 470



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 25/334 (7%)

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           Q+ +  +P  +     L E ++  N L  LP  +  L  L TL LH N L+    E  QL
Sbjct: 32  QHGLEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQL 91

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR-SSLVNGPTPA-LLKYLRSR 332
             L  LD+SNN    +P E   +  LR+       L+ LR  +L  G  P  +LK+L + 
Sbjct: 92  GHLESLDVSNNPEFKIPLE--HLLQLRQ-------LKVLRLHNLHLGQVPEDILKWLLNL 142

Query: 333 --LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N +        DL     RL+   KEL L   N S +P  +     +T LDL  N
Sbjct: 143 EILGLNGNQLV-----DLPIYTVRLN-KLKELHLRNNNFSTLPVHVCSLSALTTLDLEGN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            + +LP E+    +LQ + L  N     P   L +L +++ L+L  N ++++P D  + +
Sbjct: 197 KLHDLPNEIVQLVNLQEVYLQNNFFHHLP-VQLCALGNIAVLELHGNHVKEIPPDICR-L 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ ++ S N I  LP+     +L +L+ LY +   L+  P    RLQ+LR +D +QN 
Sbjct: 255 AKLREVNFSNNKIEKLPKE--VGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNR 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            + +P     L +L  L + DNN+  +P E+ ++
Sbjct: 313 FEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANL 346



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 181/441 (41%), Gaps = 23/441 (5%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD +   T L +     N LKELP ++    NL+      N + +LP ++     +  L
Sbjct: 38  LPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHLESL 97

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPS 224
           DV  N    +    +     L  L      L  +PE I   L  L  L L+ N+++ +P 
Sbjct: 98  DVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLPI 157

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
                  L E ++ NN  S LP  +  LS L TLDL  N+L +   E  QL  L  + L 
Sbjct: 158 YTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQ 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    LP ++  +  +  L L GN ++ +   +              RL +  +   S 
Sbjct: 218 NNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDI-------------CRLAKLREVNFSN 264

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            K + +       V  + L  +   L ++P        +  +D ++N  +E+P  L    
Sbjct: 265 NKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLG 324

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL----DLS 459
           +L  L +  N +   P  +  +L  L  L L  N   + P +   ++P L+ L    D  
Sbjct: 325 NLAVLAMDDNNLYHIPKEV-ANLRKLKELGLSGNVFEKFP-EAICNLPSLEKLFLGQDHG 382

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
             + S+P     S L  LQ+L L    L   P  I +L  L  L    N LQ +P+    
Sbjct: 383 QQLTSVPST--ISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICE 440

Query: 520 LTSLTELDLSDNNISALPPEL 540
           L +L  L L +N ++ALP + 
Sbjct: 441 LKALKYLYLHNNLLTALPSDF 461


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 207/436 (47%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 238 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 284

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 285 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 344

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 345 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 404

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 405 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 463

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 464 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 523

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L+                       RL + + ++++     
Sbjct: 524 IEVLPHEI------GLLHELQ-----------------------RLILQTNQITM----- 549

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 550 --LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 607

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 608 KYLNIDKCPLSTIPPE 623



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 166 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 225

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 226 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 284

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 285 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 344

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 345 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 400

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 401 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 453

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 454 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 511

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 512 RRLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 569

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 570 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 602


>gi|443734386|gb|ELU18388.1| hypothetical protein CAPTEDRAFT_137734 [Capitella teleta]
          Length = 725

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 243/506 (48%), Gaps = 42/506 (8%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  +   L  LILA N I  +  +L NL  L +L +  NKL E+P+ +G L  L+ LD+S
Sbjct: 27  KIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSVLGVLQKLQLLDLS 86

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P EI     L +   ++N+L E+   +     L     + N I  +P  ++  
Sbjct: 87  DNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSAISKL 146

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             +  L +E N+L  LS   +     L +L  S N +  +P  I +L  L +L L  N +
Sbjct: 147 QNLQVLALECNELDFLSVE-VCHIHGLQKLQVSGNNITNLPYGIENLVCLQQLLLDDNDL 205

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
             IP  I    SL E  + +N + AL   E+ KL  L  L L++N + E   E  Q+  L
Sbjct: 206 DFIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEML 265

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
            +L L  NS+S +P EIG +  L +L L  N L +L   L       +L   ++ L +  
Sbjct: 266 EILGLEGNSISVIPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCD-- 323

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                      + +  ++      LSLE  ++S +PS +    E+  L+L  NS+  LP 
Sbjct: 324 -----------VPVELKILTQMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPN 372

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           ++++  +LQ + LSRN    +P   LT LS++  L++ +N + Q+P + F ++  L++ +
Sbjct: 373 DIANLENLQHVTLSRNSFGTFPMP-LTQLSTIETLRMCHNSIAQLPEE-FTNLQNLKLFE 430

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           +S+N+                        ++E P  +  +  L  ++L+ N L+S+    
Sbjct: 431 MSHNV------------------------MQEFPVQLCFIPGLETVNLANNKLESVAVEV 466

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L  LTELD+S+NN  +LP E+ S+
Sbjct: 467 NKLNKLTELDISNNNFDSLPLEVCSI 492



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 230/535 (42%), Gaps = 70/535 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L+L +N + ++   + +L  L VL ++ N + E+P+AI +L  L+ L +  N +  +
Sbjct: 103 LTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSAISKLQNLQVLALECNELDFL 162

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             E+     L K   S N +  LP  +   + L      +N +  +P  +     + +L 
Sbjct: 163 SVEVCHIHGLQKLQVSGNNITNLPYGIENLVCLQQLLLDDNDLDFIPIQIFWLESLQELA 222

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L    +A    L  L  + N +  +P  IG +  L  L L  N I  IP  I
Sbjct: 223 LSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEMLEILGLEGNSISVIPVEI 282

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--------------- 271
               +L E Y+GNN L +LP EL     +  L+L  N L +  VE               
Sbjct: 283 GNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPVELKILTQMISLSLEDN 342

Query: 272 --------ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
                    C L  L VL+L  NSLS LP +I  +  L+ + L+ N   T    L    T
Sbjct: 343 DISELPSCVCALAELEVLNLDGNSLSSLPNDIANLENLQHVTLSRNSFGTFPMPLTQLST 402

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL--------SLEGMNLS---- 370
              L+   + + +  +   +     L  M+  +    +E          LE +NL+    
Sbjct: 403 IETLRMCHNSIAQLPEEFTNLQNLKLFEMSHNV---MQEFPVQLCFIPGLETVNLANNKL 459

Query: 371 -AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN---KIKDWPDAILTSL 426
            ++  E+ +  ++T+LD+S N+   LP E+ S   ++ LILS+    ++K+ P+    + 
Sbjct: 460 ESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQEEGLRLKNIPEEF--AR 517

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
                L LD N +R++P+           L  S N+ SL                +   +
Sbjct: 518 CRAEHLHLDYNDIRELPA----------FLAKSNNLTSLT---------------MSHNR 552

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L   P +I + Q+LR   ++ N +  +PE F  +  LT+L L DN +   P ++V
Sbjct: 553 LTSLPDEICKSQKLRTFHVNDNQITKLPEMFGKMHHLTDLRLHDNPLKNPPSDVV 607



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 199/413 (48%), Gaps = 37/413 (8%)

Query: 34  EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHML 93
           +A +G +  +  +L+ L L +N I ++  ++  + +L +L +  N +S +P  IG L  L
Sbjct: 229 KALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEMLEILGLEGNSISVIPVEIGNLANL 288

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + L +  N +  +P+E+    A+   + + N L ++P  L     +      +N I+ LP
Sbjct: 289 EELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPVELKILTQMISLSLEDNDISELP 348

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
             +   +++  L+++GN L+ L N+ IA+   L  +  S+N     P  +  LS +  L 
Sbjct: 349 SCVCALAELEVLNLDGNSLSSLPND-IANLENLQHVTLSRNSFGTFPMPLTQLSTIETLR 407

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           +  N I  +P   +   +L  F M +N +   P +L  +  L T++L +N+L+   VE  
Sbjct: 408 MCHNSIAQLPEEFTNLQNLKLFEMSHNVMQEFPVQLCFIPGLETVNLANNKLESVAVEVN 467

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L +L+ LD+SNN+   LP E+  +  + KL+L+      LR  L N P     ++ R R
Sbjct: 468 KLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQE--EGLR--LKNIPE----EFARCR 519

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                                     ++ L L+  ++  +P+ + ++  +T L +S N +
Sbjct: 520 --------------------------AEHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRL 553

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
             LP E+     L+T  ++ N+I   P+ +   +  L+ L+L +NPL+  PSD
Sbjct: 554 TSLPDEICKSQKLRTFHVNDNQITKLPE-MFGKMHHLTDLRLHDNPLKNPPSD 605



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 29/297 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L  D+ NL  L  + +S N     P  + +L  +++L +  NSI +
Sbjct: 356 ELEVLNLDGNSLSSLPNDIANLENLQHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIAQ 415

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+E  +   L  F+ S N ++E P  L     L     +NN             K+  +
Sbjct: 416 LPEEFTNLQNLKLFEMSHNVMQEFPVQLCFIPGLETVNLANN-------------KLESV 462

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN---RILSI 222
            VE NKL             LTEL  S N  + +P  + S+ ++ +L L Q    R+ +I
Sbjct: 463 AVEVNKL-----------NKLTELDISNNNFDSLPLEVCSIPKIEKLILSQEEGLRLKNI 511

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLD 281
           P   + C +    ++  N +  LPA L K + L +L +  N+L     E C+  +L    
Sbjct: 512 PEEFARCRA-EHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLPDEICKSQKLRTFH 570

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           +++N ++ LP   GKM  L  L L  NPL+   S +V G     +    S+   +ED
Sbjct: 571 VNDNQITKLPEMFGKMHHLTDLRLHDNPLKNPPSDVVVGGVLQPIDRFISKHIAHED 627



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
           CL L    L  + S    D   L  L L+ N I S+P      +L +L+ L L+  +L E
Sbjct: 13  CLSLIGKHLTSI-SPKIVDCETLNCLILASNEITSIP--VELGNLINLEILILQSNKLHE 69

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            P+ +  LQ+L++LDLS N L  +P     L  LT+L L++N ++ + P+++ +
Sbjct: 70  IPSVLGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDL 123


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 187/384 (48%), Gaps = 46/384 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA          D++ L L HNN E L +++  L  LT L +S N+L  LP  I
Sbjct: 30  TYHNLTEA-----LQNPTDVRILSL-HNN-ETLPKEIGELQNLTELYLSSNQLKTLPKEI 82

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  ++ L +S N +  +P +IG    L + D ++N L  LP  +G+  NL +    NN
Sbjct: 83  GKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNN 142

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+D+     + +L ++GN+L  L  + I     LTEL  + N L  +P+ IG+L 
Sbjct: 143 QLKTLPKDIGQLQNLRELYLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLK 201

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N + ++P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+  
Sbjct: 202 NLGELLLINNELTTLPKEIGKLKNLQVLYLG-ALLTTLPNDIGYLKSLRELNLSGNQITT 260

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              +  QL+ L VL LS N L+ LP EIG++  LR+L L+GN + TL         P  +
Sbjct: 261 LPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKEI 311

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L+S                            +EL+L G  ++ +P EI +   + +L+
Sbjct: 312 GELQSL---------------------------RELNLSGNQITTLPKEIGKLQSLRELN 344

Query: 387 LSRNSIQELPPELSSCASLQTLIL 410
           L  N I  +P E+    +LQ L L
Sbjct: 345 LGGNQITTIPKEIGHLKNLQVLYL 368



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 16/301 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L+ +P E+ K                +++L L++N +  L +D+  L  L  L
Sbjct: 68  LYLSSNQLKTLPKEIGK-------------LQKIERLSLSNNQLTTLPKDIGKLKKLREL 114

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N L+ LP  IG+L  L+ L +  N +  +P +IG    L +     NQLK LP  +
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDI 174

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL++   +NN +T+LP+D+ +   + +L +  N+LT L    I     L  L    
Sbjct: 175 GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE-IGKLKNLQVLYLGA 233

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            LL  +P  IG L  L  L+L  N+I ++P  I    +L   Y+  N L+ LP E+G+L 
Sbjct: 234 -LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQ 292

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQ+     E  +L+ L  L+LS N ++ LP EIGK+ +LR+L L GN + T
Sbjct: 293 NLRELDLSGNQITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITT 352

Query: 313 L 313
           +
Sbjct: 353 I 353



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 181/369 (49%), Gaps = 26/369 (7%)

Query: 80  LSELPAA-IGELHMLKS-----LDVSFNSIMK---IPDEIGSATALVKFDCSSNQLKELP 130
           LS+L A  IG  H L        DV   S+     +P EIG    L +   SSNQLK LP
Sbjct: 20  LSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLP 79

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+   +     SNN +T+LP+D+    K+ +LD+  N LT L    I     L EL 
Sbjct: 80  KEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKE-IGQLQNLRELY 138

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P+ IG L  L  L L  N++ ++P  I    +L E  + NN L+ LP ++G
Sbjct: 139 LYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIG 198

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L  LG L L +N+L     E  +L+ L VL L    L+ LP +IG + +LR+L L+GN 
Sbjct: 199 NLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQ 257

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           + TL   +       +L YL      +E+  A+  KE  I     L    +EL L G  +
Sbjct: 258 ITTLPKDIGQLQNLQVL-YL------SENQLATLPKE--IGQLQNL----RELDLSGNQI 304

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P EI E   + +L+LS N I  LP E+    SL+ L L  N+I   P  I   L +L
Sbjct: 305 TTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEI-GHLKNL 363

Query: 430 SCLKLDNNP 438
             L LD+ P
Sbjct: 364 QVLYLDDIP 372



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 169/332 (50%), Gaps = 47/332 (14%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L  LDL+NN L+ LP EIG++  LR+L L  N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDI------GQLQNLR 158

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                         EL L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ------------------------------ELYLDGNQLKTLPKDIGKLQNLTELNLTNN 188

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 449
            +  LP ++ +  +L  L+L  N++   P  I   L +L  L L    L  +P+D G+  
Sbjct: 189 PLTTLPKDIGNLKNLGELLLINNELTTLPKEI-GKLKNLQVLYL-GALLTTLPNDIGY-- 244

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LDLS N
Sbjct: 245 LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 302

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            + ++P+    L SL EL+LS N I+ LP E+
Sbjct: 303 QITTLPKEIGELQSLRELNLSGNQITTLPKEI 334



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 163/353 (46%), Gaps = 43/353 (12%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     LTEL  S N L  +P+ IG L ++ RL L  N++ ++P  I     L E  + N
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTN 118

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L  L L++NQLK    +  QL+ L  L L  N L  LP +IGK+ 
Sbjct: 119 NLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQ 178

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-V 357
            L +L LT NPL TL   + N      LK L          E      +L T+   +  +
Sbjct: 179 NLTELNLTNNPLTTLPKDIGN------LKNL---------GELLLINNELTTLPKEIGKL 223

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
            + ++   G  L+ +P++I     + +L+LS N I  LP ++    +LQ L LS N++  
Sbjct: 224 KNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLAT 283

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P  I   L +L  L L  N +  +P +                            L  L
Sbjct: 284 LPKEI-GQLQNLRELDLSGNQITTLPKE-------------------------IGELQSL 317

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           +EL L   Q+   P +I +LQ LR L+L  N + +IP+   +L +L  L L D
Sbjct: 318 RELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 370



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 149/324 (45%), Gaps = 53/324 (16%)

Query: 252 LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L+ N L+TL   +       L K  R  L  N   + +T  +D+  +       
Sbjct: 64  NLTELYLSSNQLKTLPKEI-----GKLQKIERLSLSNN---QLTTLPKDIGKLKKL---- 111

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L+ +P EI +   + +L L  N ++ LP ++    +L+ L L  N++K  
Sbjct: 112 -RELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTL 170

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSD----------------------GFKDIPMLQIL 456
           P  I   L +L+ L L NNPL  +P D                          +  LQ+L
Sbjct: 171 PKDI-GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVL 229

Query: 457 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            L   + +LP +     L  L+EL L   Q+   P DI +LQ L++L LS+N L ++P+ 
Sbjct: 230 YLGALLTTLPND--IGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKE 287

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L ELDLS N I+ LP E+
Sbjct: 288 IGQLQNLRELDLSGNQITTLPKEI 311



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 16/136 (11%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    LNLS   +  +P ++              +  +LQ L L+ N +  L +++
Sbjct: 245 LKSLR---ELNLSGNQITTLPKDI-------------GQLQNLQVLYLSENQLATLPKEI 288

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L++S N+++ LP  IGEL  L+ L++S N I  +P EIG   +L + +   N
Sbjct: 289 GQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGN 348

Query: 125 QLKELPSSLGRCLNLS 140
           Q+  +P  +G   NL 
Sbjct: 349 QITTIPKEIGHLKNLQ 364


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 40/404 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +    L KL L +N +  +  D+ NL  L +L++ +NK++ELPA++G L  L+ LD+  N
Sbjct: 39  YRMKQLSKLYLRYNKLTWISHDIGNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNN 98

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P  IG  + L   +   N+L+ LP  +G  + L  F    N +  LP  + +C  
Sbjct: 99  CLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVL 158

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L+VEGNKL VL   +++    +  L  S+N    +P  +G+L++L   ++  N +  
Sbjct: 159 LEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVRE 218

Query: 222 IPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           IP+ I S    L +  +  N+++++P ++G L  L  ++L SN+L+       QL  L  
Sbjct: 219 IPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLES 278

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L NN+LS LP    ++  LR L L GN L                    +RLPE    
Sbjct: 279 LVLGNNNLSALPESASRLVKLRVLDLEGNRL--------------------TRLPEIGSL 318

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A    E+L   + RL+   + L     NL A+   ++  GE        N + ELP  +
Sbjct: 319 AA---LEELHAQSNRLTALPQSLG----NLHAL--RLFYVGE--------NQLTELPLSI 361

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
               SL +  ++ N++ D P  +   L  L  L LD+NPL  +P
Sbjct: 362 GQLKSLTSFHVNDNRLSDVPCELANCL-KLQLLNLDDNPLTAIP 404



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 216/438 (49%), Gaps = 28/438 (6%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           H  +  L ++L  L  L VL++ HNK +E+P  I  +  L  L + +N +  I  +IG+ 
Sbjct: 5   HPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNL 64

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L      +N++ ELP+SLG    L      NNC+T+LP  +   S++S L+VE NKL 
Sbjct: 65  TGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLE 124

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSL 232
            L    I +   L       N L  +P  I +   L  L++  N+++ +P+ I S   ++
Sbjct: 125 RLPEE-IGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNV 183

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGL 290
               +  N  + +PA+LG L+KL   ++ +N ++E    + +    L  ++L+ NS++ +
Sbjct: 184 NNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSI 243

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           P +IG + +LR++ L  N L  L  +   LVN  +  L     S LPE+           
Sbjct: 244 PNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPES----------- 292

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
               A+RL V  + L LEG  L+ +P EI     + +L    N +  LP  L +  +L+ 
Sbjct: 293 ----ASRL-VKLRVLDLEGNRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNLHALRL 346

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
             +  N++ + P +I   L SL+   +++N L  VP +   +   LQ+L+L  N + ++P
Sbjct: 347 FYVGENQLTELPLSI-GQLKSLTSFHVNDNRLSDVPCE-LANCLKLQLLNLDDNPLTAIP 404

Query: 467 ENPPFSSLPHLQELYLRR 484
            N   S  P    +YLR+
Sbjct: 405 PNVT-SGGPSAVMVYLRK 421



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 202/425 (47%), Gaps = 44/425 (10%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           C   QL  LP  L    NL+     +N  T +P  +    ++SKL +  NKLT +S++  
Sbjct: 3   CYHPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHD-- 60

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                                 IG+L+ L  L +  N+I  +P+S+     L    + NN
Sbjct: 61  ----------------------IGNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNN 98

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L+ALP+ +GKLS+L +L++  N+L+    E   L +L    L  NSL  LP  I     
Sbjct: 99  CLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVL 158

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L +L + GN L  L       PT  L + +     +   +  +T   DL  + T+L +  
Sbjct: 159 LEELNVEGNKLVVL-------PTGILSQLVNVNNLQLSRNNFTTIPADLGAL-TKLEI-- 208

Query: 360 KELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              +++  ++  IP+ I+ + + + K++L+ NSI  +P ++    SL+ + L  NK++  
Sbjct: 209 --FNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELL 266

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+  L  L +L  L L NN L  +P    + +  L++LDL  N +  LPE     SL  L
Sbjct: 267 PET-LGQLVNLESLVLGNNNLSALPESASRLVK-LRVLDLEGNRLTRLPE---IGSLAAL 321

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +EL+ +  +L   P  +  L  LR+  + +N L  +P     L SLT   ++DN +S +P
Sbjct: 322 EELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDVP 381

Query: 538 PELVS 542
            EL +
Sbjct: 382 CELAN 386



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 11/189 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWE--------AVDLQKLILA 53
           I  + +  G +NL+  S+  +PN++    +  E   G    E         V+L+ L+L 
Sbjct: 223 IFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLG 282

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +NN+  L E    L  L VL++  N+L+ LP  IG L  L+ L    N +  +P  +G+ 
Sbjct: 283 NNNLSALPESASRLVKLRVLDLEGNRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNL 341

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            AL  F    NQL ELP S+G+  +L+ F  ++N ++ +P +LA+C K+  L+++ N LT
Sbjct: 342 HALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKLQLLNLDDNPLT 401

Query: 174 VLSNNLIAS 182
            +  N+ + 
Sbjct: 402 AIPPNVTSG 410


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L++N ++ L +++R L  L  L +  N+L+ LP  IG+L  L+ L +  N +M 
Sbjct: 116 NLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   + S NQ+K +P  + +   L      NN +T+LP ++    K+ +L
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQEL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L +L    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 236 SLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 295 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 355 NQLTTLPKEIGQLQNLQELYLIDNQL 380



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 167/369 (45%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG L  L+ L +S+N +  +P EIG    L   +   NQLK LP 
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLHL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N+I +IP  I     L    +GNN L+ALP E+G+
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 229 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 289 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +   +  LDL  N +  LP E+    +LQ   L+ N++   P  I   L +L 
Sbjct: 313 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEI-GQLQNLQ 371

Query: 431 CLKLDNNPL 439
            L L +N L
Sbjct: 372 ELYLIDNQL 380



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     K   +  +L+ L L HN ++ L E+
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L +    +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL   + S N I ++P+++    K+  L +  N+LT L N  I   
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE-IGQL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+
Sbjct: 230 QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  ++ +L  L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+ 
Sbjct: 290 TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349

Query: 303 LLLTGNPLRTL 313
             L  N L TL
Sbjct: 350 FELNNNQLTTL 360



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 159/349 (45%), Gaps = 47/349 (13%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P+T   L+  I+       LDL Q ++ ++P  I    +L E Y+  N L  LP E+G+L
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  NQLK    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 92  QNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL + +        LK L+                               L L    L  
Sbjct: 152 TLPTEI------GQLKNLQR------------------------------LHLWNNQLMT 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  L+LS N I+ +P E+     LQ+L L  N++   P+ I   L  L  
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI-GQLQKLQE 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L  N L  +P++    +  LQ L L  N  ++  N     L +LQ LYLR  +L    
Sbjct: 235 LSLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLS 292

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+
Sbjct: 293 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 341



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 234 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 281 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP+++     + +L +  N+L+
Sbjct: 341 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLS 381


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 207/446 (46%), Gaps = 37/446 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN++  KL+ LP  IG+L  L+ L + +N ++ +P EI     L   D S NQL  LP+
Sbjct: 52  VLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL       N +T+LP+++     +  L    N+L +L    I     L  L  
Sbjct: 112 EIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE-IGQLENLENLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  L L  N+++++P+ I    +L E  +  N L  LP  +G+
Sbjct: 171 SENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGR 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDLH N+L     E  QL+ L  L+L NN L  LP EIG++  L+ L L  NPL
Sbjct: 231 LQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                  +    P     LR    + +    +  +E+ + +         ELSLE  + S
Sbjct: 291 SFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVF--------ELSLEYKDFS 342

Query: 371 AI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
            + P  I +   +  L L       LP E+    +L+ L L  N +KD P  I   L +L
Sbjct: 343 HLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEI-GQLRNL 401

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L+ N L  +P +                            L +LQ+L L + +L+ 
Sbjct: 402 EALNLEANVLEGLPKE-------------------------IGQLRNLQKLSLHQNKLKI 436

Query: 490 APTDILRLQQLRILDLSQNSLQSIPE 515
            P  I +L+ L+ LDLS N L ++P+
Sbjct: 437 FPVGIGQLKSLQWLDLSANELITLPK 462



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 191/447 (42%), Gaps = 51/447 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           LNL+ + L  +P E+   KN  E     KW + V L K I+   N+E L           
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELS--LKWNQLVTLPKEIVELQNLEHL----------- 99

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
             ++S N+L  LP  IG L  L+SLD+  N +  +P EIG    L       N+L  LP 
Sbjct: 100 --DLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   S N +T++P+++     + +L + GN+L  L N  I     L EL  
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNE-IGQLRNLQELNL 216

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG- 250
             N L  +P+ IG L  L  LDLH+NR+  +P       SL +  + NN L  LP E+G 
Sbjct: 217 KWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQ 276

Query: 251 ------KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL- 303
                     +  L     +  +     C L L               E+ K    R L 
Sbjct: 277 LQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLR--------------EVAKDGDYRNLN 322

Query: 304 LLTGNPLRTLRSSLVNGPTPAL-----LKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           L    PL+    SL       L     LK+   +     D    T  +++  +     +T
Sbjct: 323 LAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLT 382

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L L G  L  IPSEI +   +  L+L  N ++ LP E+    +LQ L L +NK+K +
Sbjct: 383 ---LGLNG--LKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIF 437

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSD 445
           P  I   L SL  L L  N L  +P +
Sbjct: 438 PVGI-GQLKSLQWLDLSANELITLPKE 463



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 182/415 (43%), Gaps = 56/415 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL+  K     +TSLP ++     + +L ++ N+L  L    I     L  L  S+N
Sbjct: 51  RVLNLNGQK-----LTSLPREIGQLKNLRELSLKWNQLVTLPKE-IVELQNLEHLDLSEN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL++N++ ++P  I    +L   +   N L+ LP E+G+L  
Sbjct: 105 QLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+L     E  QL+ L  L LS N L  LP EIG++  L++L L  N L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +              RL            ++L T           L L    L+ +P
Sbjct: 225 PKGI-------------GRL------------QNLQT-----------LDLHENRLTILP 248

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            E  +   + KL+L  N +  LP E+    +LQ L L  N +       +  L   +C  
Sbjct: 249 REFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFP-NC-- 305

Query: 434 LDNNPLRQVPSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRM 485
             N  LR+V  DG ++++ +     L++ +LS          P       +LQ L+L   
Sbjct: 306 --NLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLYDC 363

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                P +I RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+
Sbjct: 364 GFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEI 418


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 142/275 (51%), Gaps = 25/275 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E  +N   + VLN++  +L+ LP  I +   LK LD+S N +  +P EIG    L   
Sbjct: 39  LTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVL 98

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S+N L  LP  + +  NL     S N +T+LP+++    K+  L V  N+LTVL    
Sbjct: 99  NLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKE- 157

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL+   N L  +PE IG L +  RL LH N++ ++P  +    +L + Y+  
Sbjct: 158 IGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQ 217

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------------------ 275
           N L++LP E+G+L KL TL L+SN+L     E  QL                        
Sbjct: 218 NRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQ 277

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L  LDLS+N L+ +P EIG++  LR L L+GNPL
Sbjct: 278 KLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPL 312



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 152/297 (51%), Gaps = 15/297 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+ R L  +P E+ K               +L++L L+ N ++ L +++  L  L VL
Sbjct: 52  LNLNERQLTVLPKEIEK-------------FQNLKQLDLSDNQLKVLPKEIGQLQNLQVL 98

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N L  LP  I +L  LK L++S N +  +P EIG    L     S N+L  LP  +
Sbjct: 99  NLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEI 158

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +     N +T+LPE++    K  +L +  N+LT L   L      L ++   +
Sbjct: 159 GQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGL-CKLQNLEQIYLHQ 217

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L +L  L L+ N + ++P  I    +L +  +  N L+ LP E+G+L 
Sbjct: 218 NRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQ 277

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  LDL  NQL     E  QL+ L  LDLS N L  LP EIG++  L  L + G P
Sbjct: 278 KLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYFLAMKGIP 334



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 137/301 (45%), Gaps = 40/301 (13%)

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+ K   L  LDL  NQLK    E  QL+ L VL+LS N+L  LP EI ++  
Sbjct: 58  QLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQN 117

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN L TL   +              +L + E    S  +  ++          
Sbjct: 118 LKRLNLSGNRLTTLPQEI-------------GQLKKLEWLHVSHNRLTVLPKEIGQLQNL 164

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL L G +L+ +P EI +  +  +L L  N +  LP  L    +L+ + L +N++   P
Sbjct: 165 KELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLP 224

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I   L  L  L L +N L  +P +                            L +L++
Sbjct: 225 QEI-GQLGKLWTLYLYSNELTTLPEE-------------------------IGQLQNLRQ 258

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L+   L   P +I +LQ+L  LDLS N L SIP+    L +L  LDLS N +  LP E
Sbjct: 259 LNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKE 318

Query: 540 L 540
           +
Sbjct: 319 I 319



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 153/337 (45%), Gaps = 44/337 (13%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E   +   +  L++   +LTVL    I  +  L +L  S N L  +P+ IG L  L 
Sbjct: 38  TLTEAFKNPMDVRVLNLNERQLTVLPKE-IEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQ 96

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L+L  N ++++P  I    +L    +  N L+ LP E+G+L KL               
Sbjct: 97  VLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKL--------------- 141

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                    L +S+N L+ LP EIG++  L++LLL GN L TL   +       L K+ R
Sbjct: 142 -------EWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEI-----GQLQKFER 189

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L    D++ +T  + L  +        +++ L    L+++P EI + G++  L L  N
Sbjct: 190 LYL---HDNQLTTLPQGLCKLQ-----NLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSN 241

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +L+ L L  N +   P  I   L  L  L L +N L  +P +    +
Sbjct: 242 ELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEI-GQLQKLDNLDLSDNQLTSIPKE-IGQL 299

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
             L+ LDLS N +  LP+      +  L+ LY   M+
Sbjct: 300 QNLRWLDLSGNPLVILPK-----EIGQLKNLYFLAMK 331



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           + +E  T +   +T A +  +  + L+L    L+ +P EI +   + +LDLS N ++ LP
Sbjct: 29  QSNEGQTYRT--LTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLP 86

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +LQ L LS N + + P  I   L +L  L L  N L  +P +    +  L+ L
Sbjct: 87  KEIGQLQNLQVLNLSANNLINLPKEI-DQLQNLKRLNLSGNRLTTLPQE-IGQLKKLEWL 144

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            +S+N +  LP+      L +L+EL L    L   P +I +LQ+   L L  N L ++P+
Sbjct: 145 HVSHNRLTVLPKE--IGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQ 202

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
           G   L +L ++ L  N +++LP E+
Sbjct: 203 GLCKLQNLEQIYLHQNRLTSLPQEI 227


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 209/445 (46%), Gaps = 52/445 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 221 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSSLTML 267

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPAAIG L  L +LD+S N +  +P+ IG+   L   D   N L ++P ++
Sbjct: 268 SLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETI 327

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +T++P  L +C  M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 328 GNLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSR 387

Query: 194 NLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N  +  P       + +  +++  N+I  I   I S    L +  M  NAL++LP ++G 
Sbjct: 388 NAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 447

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            S++  L+  +N L +   +  C   L +L LSNN L  +P  IG +  LR L L  N L
Sbjct: 448 WSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRL 507

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L S +       LL  L                              ++L L+   L 
Sbjct: 508 ESLPSEI------GLLHDL------------------------------QKLILQSNALQ 531

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           ++P  I     +T L +  N++Q LP E+ +  +L++L ++ N         L    +L+
Sbjct: 532 SLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESLYINDNASLVKLPYELALCQNLA 591

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQI 455
            + ++N PL  +P +     P L I
Sbjct: 592 IMSIENCPLSALPPEVVGGGPSLVI 616



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 212/462 (45%), Gaps = 83/462 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 194 NLKTLALNENSLTSLPDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKV 253

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + ++L       N++ ELP+++G   NL+    S+N +  LPE + +C  ++ L
Sbjct: 254 VGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTAL 313

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+L+ L RL L  N++ +IP S
Sbjct: 314 DLQHNDLL------------------------DIPETIGNLANLQRLGLRYNQLTAIPVS 349

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +  C  + EF +  N++S LP   L  LS L T+ L  N    Y               +
Sbjct: 350 LRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINM 409

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---S 315
           E  Q+             L+ L++  N+L+ LP +IG  + + +L    N L  L     
Sbjct: 410 EHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIH 469

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            L N     L   +  R+P            + I    +L V    L LE   L ++PSE
Sbjct: 470 CLQNLEILILSNNMLKRIP------------NTIGNLKKLRV----LDLEENRLESLPSE 513

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL- 434
           I    ++ KL L  N++Q LP  +    +L  L +  N ++  P+ I T L +L  L + 
Sbjct: 514 IGLLHDLQKLILQSNALQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGT-LENLESLYIN 572

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLP 475
           DN  L ++P +          L L  N+A +  EN P S+LP
Sbjct: 573 DNASLVKLPYE----------LALCQNLAIMSIENCPLSALP 604



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 169/367 (46%), Gaps = 36/367 (9%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           ++RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L   
Sbjct: 149 ILRLDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 208

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N  +  +L 
Sbjct: 209 PDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLS 268

Query: 328 YLRSR---LPENEDSEASTTKEDL-------ITMATRLSVTSKELSLEGMNLSAIPSEIW 377
              ++   LP       + T  DL       +  A    V    L L+  +L  IP  I 
Sbjct: 269 LRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETIG 328

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
               + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L  N
Sbjct: 329 NLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSRN 388

Query: 438 PLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP----- 475
                PS G   F ++  +     QI  + Y I S         + EN   +SLP     
Sbjct: 389 AFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLDIGT 447

Query: 476 --HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
              + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +N +
Sbjct: 448 WSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRL 507

Query: 534 SALPPEL 540
            +LP E+
Sbjct: 508 ESLPSEI 514



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 212/465 (45%), Gaps = 50/465 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +SI  IP  +   T+L++F    N++  LP  +G   NL     + N +TSLP+ 
Sbjct: 152 LDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDS 211

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +   +  LD+  NKL+                         +P+ I  L  L  L L 
Sbjct: 212 LQNLKALKVLDLRHNKLS------------------------EIPDVIYKLHTLTTLYLR 247

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEAC 273
            NRI  +  ++    SL    +  N +  LPA +G L  L TLDL  N LK     +  C
Sbjct: 248 FNRIKVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNC 307

Query: 274 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
            + L+ LDL +N L  +P  IG +  L++L L  N L  +  SL N           + +
Sbjct: 308 -VNLTALDLQHNDLLDIPETIGNLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSI 366

Query: 334 PENEDSE-ASTTKEDLITM-------------ATRLSVTSKELSLEGMNLSAIPSEIW-E 378
            +  D   AS +    IT+             A   +VTS  +++E   +  I   I+  
Sbjct: 367 SQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTS--INMEHNQIDKIQYGIFSR 424

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           A  +TKL++  N++  LP ++ + + +  L    N +   PD I   L +L  L L NN 
Sbjct: 425 AKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDI-HCLQNLEILILSNNM 483

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L+++P +   ++  L++LDL  N + SLP       L  LQ+L L+   L+  P  I  L
Sbjct: 484 LKRIP-NTIGNLKKLRVLDLEENRLESLPSE--IGLLHDLQKLILQSNALQSLPRTIGHL 540

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
             L  L + +N+LQ +PE    L +L  L ++DN ++  LP EL 
Sbjct: 541 TNLTYLSVGENNLQYLPEEIGTLENLESLYINDNASLVKLPYELA 585



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 46/281 (16%)

Query: 265 LKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +KE+  C E   LRL   DLS +S++ +PP +   T+L +  L GN + +L         
Sbjct: 138 IKEFQRCKEENILRL---DLSKSSITVIPPSVKDCTSLIEFYLYGNKISSL--------- 185

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
           P  +  L +                            K L+L   +L+++P  +     +
Sbjct: 186 PVEIGCLSNL---------------------------KTLALNENSLTSLPDSLQNLKAL 218

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             LDL  N + E+P  +    +L TL L  N+IK   D  L +LSSL+ L L  N + ++
Sbjct: 219 KVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDN-LKNLSSLTMLSLRENKIHEL 277

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P+     +  L  LDLS+N +  LPE     +  +L  L L+   L + P  I  L  L+
Sbjct: 278 PA-AIGHLRNLTTLDLSHNHLKHLPE--AIGNCVNLTALDLQHNDLLDIPETIGNLANLQ 334

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            L L  N L +IP   +N   + E ++  N+IS LP  L++
Sbjct: 335 RLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLA 375


>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
           pulchellus]
          Length = 626

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 220/491 (44%), Gaps = 103/491 (20%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+    V L+ L L+ N++  L + L NL  L VL+V HNKL+E+P  + +L  L +L +
Sbjct: 185 DELGSLVHLETLALSENSLTTLPDTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFL 244

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            FN I ++ + I + T L       N+++ELP+ +G+   L  F ASNN +  LP ++ +
Sbjct: 245 RFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGN 304

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           C ++S LDV+ N+L                          +P+TIG+L  L R  +  N+
Sbjct: 305 CVQLSTLDVQHNELV------------------------DLPDTIGNLMVLSRFGIRYNQ 340

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEY--------- 268
           + ++P S+S C  + +F + +N +S LP   L   + L TL L  N    Y         
Sbjct: 341 LTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFASYPSGGPAQFT 400

Query: 269 -----CVEACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
                 +E  Q+             LS L++  N L+ LP ++G  TT+ +L L  N L 
Sbjct: 401 TVTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLN 460

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            +         P  ++YL                           V  + L L    L  
Sbjct: 461 KI---------PDDIQYL---------------------------VCLEVLILSNNLLRR 484

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+ I   G +  LDL  N +  LP E+    +LQ L++  N++ + P AI   L +L+ 
Sbjct: 485 LPATIGSLGALRVLDLEENRLDGLPNEIGHLKNLQRLVVQSNQLTNLPRAI-GYLVNLTY 543

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRR 484
           L +  N L Q+P    ++I  L+ L+  Y    + +NP   SLP       +LQ + +  
Sbjct: 544 LSVGENNLNQIP----EEIGTLENLESLY----INDNPNLHSLPFELALCTNLQIMSIEN 595

Query: 485 MQLREAPTDIL 495
             L + P +I+
Sbjct: 596 CPLSQIPAEIV 606



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 214/451 (47%), Gaps = 64/451 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ +  L ++P  VYK                L  L L  N I ++ E++ NL  LT+L
Sbjct: 219 LDVRHNKLNEIPEVVYK-------------LTSLTTLFLRFNRIREVSENIANLTNLTML 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + D S N +  +P EIG+   L   D   N+L +LP ++
Sbjct: 266 SLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + LS F    N +T++P+ L++C  ++  +VE N ++ L   L+AS+T L  L  S+
Sbjct: 326 GNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSR 385

Query: 194 NLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  +++  N+I  IP  I S    L++  M  N L++LP +LG 
Sbjct: 386 NNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGT 445

Query: 252 LSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            + +  L+L +NQL       +Y V  C   L VL LSNN L  LP  IG +  LR L L
Sbjct: 446 WTTMVELNLGTNQLNKIPDDIQYLV--C---LEVLILSNNLLRRLPATIGSLGALRVLDL 500

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L  L         P  + +L++                      RL V S +    
Sbjct: 501 EENRLDGL---------PNEIGHLKN--------------------LQRLVVQSNQ---- 527

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILT 424
              L+ +P  I     +T L +  N++ ++P E+ +  +L++L ++ N  +   P   L 
Sbjct: 528 ---LTNLPRAIGYLVNLTYLSVGENNLNQIPEEIGTLENLESLYINDNPNLHSLPFE-LA 583

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             ++L  + ++N PL Q+P++     P L I
Sbjct: 584 LCTNLQIMSIENCPLSQIPAEIVNGGPSLVI 614



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 222/490 (45%), Gaps = 73/490 (14%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + ++ LP+++ EL  L+   +  N +  +PDE+GS                  
Sbjct: 148 TRLDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGS------------------ 189

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
                 ++L     S N +T+LP+ LA+  ++  LDV  NKL  +   ++   T LT L 
Sbjct: 190 -----LVHLETLALSENSLTTLPDTLANLKQLRVLDVRHNKLNEIP-EVVYKLTSLTTLF 243

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N +  + E I +L+ L  L L +N+I  +P+ I     L  F   NN L  LPAE+G
Sbjct: 244 LRFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIG 303

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                             CV+     LS LD+ +N L  LP  IG +  L +  +  N L
Sbjct: 304 N-----------------CVQ-----LSTLDVQHNELVDLPDTIGNLMVLSRFGIRYNQL 341

Query: 311 RTLRSSLVNGPTPALLKY---LRSRLPENEDSEASTTKEDLITM-------------ATR 354
             +  SL N            L S+LPE     AS T    +T+             A  
Sbjct: 342 TAVPKSLSNCVLITDFNVESNLVSQLPEG--LLASFTNLHTLTLSRNNFASYPSGGPAQF 399

Query: 355 LSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
            +VTS  +++E   ++ IP  I+  A  ++KL++  N +  LP +L +  ++  L L  N
Sbjct: 400 TTVTS--INMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTN 457

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           ++   PD I   L  L  L L NN LR++P+     +  L++LDL  N +  LP      
Sbjct: 458 QLNKIPDDI-QYLVCLEVLILSNNLLRRLPAT-IGSLGALRVLDLEENRLDGLPNE--IG 513

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN- 531
            L +LQ L ++  QL   P  I  L  L  L + +N+L  IPE    L +L  L ++DN 
Sbjct: 514 HLKNLQRLVVQSNQLTNLPRAIGYLVNLTYLSVGENNLNQIPEEIGTLENLESLYINDNP 573

Query: 532 NISALPPELV 541
           N+ +LP EL 
Sbjct: 574 NLHSLPFELA 583



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 155/358 (43%), Gaps = 39/358 (10%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL ++ I  +PSS+     L EFY+  N L+ LP ELG L  L TL L  N L     
Sbjct: 149 RLDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTLPD 208

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               L+ L VLD+ +N L+ +P  + K+T+L  L L  N +R +  ++ N     +L   
Sbjct: 209 TLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLS-- 266

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L EN+  E       L  + T              +L  +P+EI    +++ LD+  
Sbjct: 267 ---LRENKIRELPAGIGKLTQLVT--------FDASNNHLKHLPAEIGNCVQLSTLDVQH 315

Query: 390 NSIQELP-----------------------PELSSCASLQTLILSRNKIKDWPDAILTSL 426
           N + +LP                         LS+C  +    +  N +   P+ +L S 
Sbjct: 316 NELVDLPDTIGNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASF 375

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           ++L  L L  N     PS G      +  +++ +N I  +P    FS   HL +L ++  
Sbjct: 376 TNLHTLTLSRNNFASYPSGGPAQFTTVTSINMEHNQINKIPFGI-FSRAKHLSKLNMKEN 434

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           QL   P D+     +  L+L  N L  IP+  + L  L  L LS+N +  LP  + S+
Sbjct: 435 QLTSLPLDLGTWTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSL 492


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 207/446 (46%), Gaps = 37/446 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN++  KL+ LP  IG+L  L+ L + +N ++ +P EI     L   D S NQL  LP+
Sbjct: 52  VLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL       N +T+LP+++     +  L    N+L +L    I     L  L  
Sbjct: 112 EIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE-IGQLENLENLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  L L  N+++++P+ I    +L E  +  N L  LP  +G+
Sbjct: 171 SENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGR 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDLH N+L     E  QL+ L  L+L NN L  LP EIG++  L+ L L  NPL
Sbjct: 231 LQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                  +    P     LR    + +    +  +E+ + +         ELSLE  + S
Sbjct: 291 SFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVF--------ELSLEYKDFS 342

Query: 371 AI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
            + P  I +   +  L L       LP E+    +L+ L L  N +KD P  I   L +L
Sbjct: 343 HLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEI-GQLRNL 401

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L+ N L  +P +                            L +LQ+L L + +L+ 
Sbjct: 402 EALNLEANVLEGLPKE-------------------------IGQLRNLQKLSLHQNKLKI 436

Query: 490 APTDILRLQQLRILDLSQNSLQSIPE 515
            P  I +L+ L+ LDLS N L ++P+
Sbjct: 437 FPVGIGQLKSLQWLDLSANELITLPK 462



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 221/530 (41%), Gaps = 69/530 (13%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           LNL+ + L  +P E+   KN  E     KW + V L K I+   N+E L           
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELS--LKWNQLVTLPKEIVELQNLEHL----------- 99

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
             ++S N+L  LP  IG L  L+SLD+  N +  +P EIG    L       N+L  LP 
Sbjct: 100 --DLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   S N +T++P+++     + +L + GN+L  L N  I     L EL  
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNE-IGQLRNLQELNL 216

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG- 250
             N L  +P+ IG L  L  LDLH+NR+  +P       SL +  + NN L  LP E+G 
Sbjct: 217 KWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQ 276

Query: 251 ------KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL- 303
                     +  L     +  +     C L L               E+ K    R L 
Sbjct: 277 LQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLR--------------EVAKDGDYRNLN 322

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           L    PL+    SL                   E  + S     +I     L    + L 
Sbjct: 323 LAQEEPLKVFELSL-------------------EYKDFSHLFPKVILKFRNL----QSLH 359

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L       +P EI     +  L L  N ++++P E+    +L+ L L  N ++  P  I 
Sbjct: 360 LYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEI- 418

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L +L  L L  N L+  P  G   +  LQ LDLS N + +LP+      L +L+ L L
Sbjct: 419 GQLRNLQKLSLHQNKLKIFPV-GIGQLKSLQWLDLSANELITLPKE--IGQLENLENLNL 475

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDN 531
              QL     +I +L+ LR L+LS N L S   E  + L    ++D  DN
Sbjct: 476 SNNQLTTLSQEIGQLENLRELNLSNNQLSSEEKERIRKLLPKCKIDFGDN 525



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 182/415 (43%), Gaps = 56/415 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL+  K     +TSLP ++     + +L ++ N+L  L    I     L  L  S+N
Sbjct: 51  RVLNLNGQK-----LTSLPREIGQLKNLRELSLKWNQLVTLPKE-IVELQNLEHLDLSEN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL++N++ ++P  I    +L   +   N L+ LP E+G+L  
Sbjct: 105 QLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+L     E  QL+ L  L LS N L  LP EIG++  L++L L  N L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +              RL            ++L T           L L    L+ +P
Sbjct: 225 PKGI-------------GRL------------QNLQT-----------LDLHENRLTILP 248

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            E  +   + KL+L  N +  LP E+    +LQ L L  N +       +  L   +C  
Sbjct: 249 REFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFP-NC-- 305

Query: 434 LDNNPLRQVPSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRM 485
             N  LR+V  DG ++++ +     L++ +LS          P       +LQ L+L   
Sbjct: 306 --NLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLYDC 363

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                P +I RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+
Sbjct: 364 GFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEI 418


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 207/436 (47%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 401 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 519

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L+                       RL + + ++++     
Sbjct: 520 IEVLPHEI------GLLHELQ-----------------------RLILQTNQITM----- 545

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 546 --LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 604 KYLNIDKCPLSTIPPE 619



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 396

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 397 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 449

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 450 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 507

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 508 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 565

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 566 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 598


>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
          Length = 556

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 250/520 (48%), Gaps = 41/520 (7%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           LK D+ ++  +T L++S+N++S LPA IG L  L+SLD+S N I  +P +IG  T++ + 
Sbjct: 4   LKFDILSISWITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQL 63

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S N L  LP  +    + S    S+N +++LP  ++  S ++  D+    L  +  +L
Sbjct: 64  DLSFNMLDSLPKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDL 123

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           + + ++   L+   N ++ +P ++ + + L+ L L  NRI  +P+SI  C +L    + +
Sbjct: 124 LENSSIRVVLLG-HNQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRH 182

Query: 240 NALSALPAELGK---LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP---- 291
           N L  LP E+G+   L+KL  L  H N +K+   +  +L RL  L + +N L  LP    
Sbjct: 183 NRLRRLPPEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLPPGLR 242

Query: 292 -------------------PEIGKMTTLRKLLLTGNPLRTLRSSLVNGP--TPALLKYLR 330
                              PEIG    L +L L  N L TL  ++ N    T   +   +
Sbjct: 243 FLTSLTELLANDNMLEEVCPEIGACVHLTRLNLHANKLVTLPHTIGNCSLLTQLTIHQNK 302

Query: 331 SRLPENE------DSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWE-AGE 381
            +LPE        D   S    +L+ +   +   V  + L L G NL+ +P  + E   +
Sbjct: 303 IKLPEEIGHFTLLDELFSICDNELVEIPESVGNLVRLRSLRLSGNNLTMLPDSLSELFTD 362

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L ++ N ++ L   +S  ++L  L L  N ++  P + L    SL  L L+ N  + 
Sbjct: 363 LVLLSVAHNKVESLTDRISVLSNLTVLELEDNLLQHLPQS-LEGNRSLVKLTLNRNQFQS 421

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
            P   F D+  LQIL+L+ N   L       +   L+ L L+  Q+   P++I  +  L 
Sbjct: 422 FPEVIF-DLSGLQILNLALNQIELVPEALCEANTALKLLALQHNQIHALPSNIGLMANLI 480

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +LDL+QN + S+P        L  L LS N + + P +++
Sbjct: 481 LLDLTQNHIISLPSSISACQRLRALFLSGNPLPSFPRDVL 520



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 234/528 (44%), Gaps = 99/528 (18%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS--- 99
           +   +++L L+ N ++ L +++ +LP  + L +SHN+LS LP +I  L  L   D+S   
Sbjct: 56  QLTSMKQLDLSFNMLDSLPKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFG 115

Query: 100 -------------------------------------------FNSIMKIPDEIGSATAL 116
                                                       N I ++P  IG  TAL
Sbjct: 116 LQAVPPDLLENSSIRVVLLGHNQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTAL 175

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSD---FKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
              D   N+L+ LP  +GR   L+        +N I  LP DL   +++  L V+ N L 
Sbjct: 176 TSLDLRHNRLRRLPPEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILE 235

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           +L   L    T LTEL+A+ N+L  +   IG+   L RL+LH N+++++P +I  C  L 
Sbjct: 236 MLPPGL-RFLTSLTELLANDNMLEEVCPEIGACVHLTRLNLHANKLVTLPHTIGNCSLLT 294

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           +  +  N +  LP E+G  + L       ++L   C              +N L  +P  
Sbjct: 295 QLTIHQNKIK-LPEEIGHFTLL-------DELFSIC--------------DNELVEIPES 332

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +G +  LR L L+GN L  L  SL    T  +L               S     + ++  
Sbjct: 333 VGNLVRLRSLRLSGNNLTMLPDSLSELFTDLVL--------------LSVAHNKVESLTD 378

Query: 354 RLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
           R+SV S    L LE   L  +P  +     + KL L+RN  Q  P  +   + LQ L L+
Sbjct: 379 RISVLSNLTVLELEDNLLQHLPQSLEGNRSLVKLTLNRNQFQSFPEVIFDLSGLQILNLA 438

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
            N+I+  P+A+  + ++L  L L +N +  +PS+    +  L +LDL+ N I SLP +  
Sbjct: 439 LNQIELVPEALCEANTALKLLALQHNQIHALPSN-IGLMANLILLDLTQNHIISLPSS-- 495

Query: 471 FSSLPHLQELYLRRMQLREAPTDIL---RLQQLRILDLSQNSLQSIPE 515
            S+   L+ L+L    L   P D+L   RLQQ+  L    +SL  +P+
Sbjct: 496 ISACQRLRALFLSGNPLPSFPRDVLLLSRLQQVLFL----SSLSRLPD 539



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 33/53 (62%)

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P  I  L QL+ LDLS N + S+P     LTS+ +LDLS N + +LP E+ S+
Sbjct: 28  PAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSLPKEMSSL 80


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 278 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 324

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 325 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 384

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 385 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 444

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 445 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 503

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 504 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 563

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 564 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 587

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 588 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 647

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 648 KYLNIDKCPLSTIPPE 663



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 206 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 265

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 266 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 324

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 325 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 384

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 385 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 440

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 441 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 493

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 494 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 551

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 552 RRLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 609

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 610 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 642



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 43/417 (10%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           +++  +L RC  +     S + IT +P  + +C  +++L +  NK+  L    I     L
Sbjct: 195 QDVIKALQRC-RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPE-IGCLVSL 252

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  N ++A+ 
Sbjct: 253 RNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVA 312

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L L
Sbjct: 313 DDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDL 372

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L  +  S+ N         L+S                L+ +  R +         
Sbjct: 373 QHNELLDIPDSIGN---------LKS----------------LVRLGMRYN--------- 398

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILT 424
              LS++P+ +     + + ++  N I +LP   L+S + L T+ LSRN+   +P     
Sbjct: 399 --RLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPA 456

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLR 483
             +++  + L++N + ++P   F     L  L++  N+  +LP +    +  ++ EL L 
Sbjct: 457 QFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLD--IGTWVNMVELNLA 514

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              L++ P DI+ LQ L IL LS N L+ IP    NL  L  LDL +N I  LP E+
Sbjct: 515 TNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEI 571


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 184/355 (51%), Gaps = 45/355 (12%)

Query: 14  LNLSNRSLRDVPNEVYK----------NFDEAGE--GDKWWEAVDLQKLILAHNNIEKLK 61
           L+LS + L ++P E+ K             EA E  GD++ E V       + NN++ L 
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKV-------SGNNLKTLP 73

Query: 62  EDLRNLPLLTVLNVSHN-----------------------KLSELPAAIGELHMLKSLDV 98
            +L  LP L  L++S N                       KL+E+P AI +L  L  LD+
Sbjct: 74  LELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDL 133

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N I +IP+ I   T L +    +NQ+ ++P ++ +  NL+ F  SNN IT +PE +A+
Sbjct: 134 SNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIAN 193

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +++L +  N++T +    IA+ T LT+L    N +  +PE I +L  L +LDL  N+
Sbjct: 194 LTNLTQLILSNNQITQIP-EAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNK 252

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  IP +I+   +L +  + +N ++ +P  + KL+ L  LDLHSN++ +      +L  L
Sbjct: 253 ITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNL 312

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP-TPALLKYLRS 331
           + LDL +N ++ +P  I K+T L +L L+ N +  +   ++N      +L YLR 
Sbjct: 313 TQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNSKDAKEILNYLRQ 367



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 60/391 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL------------------DVSFNSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL                   VS N++  +P E+    
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKTLPLELLGLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       +T +P+ +A  + +++LD+  N++T 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQ 140

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           +    IA  T LT+L+   N +  +PE I  L+ L +  L  N+I  IP +I+   +L +
Sbjct: 141 IPE-AIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQ 199

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             + NN ++ +P  +  L+ L  LDL +N++ +       L  L+ LDL NN ++ +P  
Sbjct: 200 LILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEA 259

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I K+T L +L+L+ N +                    +++PE             I   T
Sbjct: 260 IAKLTNLTQLILSDNKI--------------------TQIPE------------AIAKLT 287

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
            L+    +L L    ++ IP  I +   +T+LDL  N I ++P  ++   +L  L LS N
Sbjct: 288 NLT----QLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDN 343

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
            I + P  +L S  +   L    N LRQ+ +
Sbjct: 344 SITNIPLEMLNSKDAKEIL----NYLRQIST 370



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 17/314 (5%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   +++ Y     +    V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKKIEAYEFVGDRYLEKV---SGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA---STTKEDL-- 348
           +  +  LRKL ++GNPL ++   +        L  +R +L E  D+ A   + T+ DL  
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSN 135

Query: 349 -----ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I  A        +L L    ++ IP  I +   +T+  LS N I ++P  +++  
Sbjct: 136 NQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLT 195

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           +L  LILS N+I   P+AI  +L++L+ L L NN + Q+P      I + Q+  L+  I 
Sbjct: 196 NLTQLILSNNQITQIPEAI-ANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKIT 254

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +PE    + L +L +L L   ++ + P  I +L  L  LDL  N +  IPE    LT+L
Sbjct: 255 QIPE--AIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNL 312

Query: 524 TELDLSDNNISALP 537
           T+LDL  N I+ +P
Sbjct: 313 TQLDLRSNKITQIP 326



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 61/352 (17%)

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N L  +P  +  L  L +LD+  N + SIP  ++    L E  +    L+ +P  + 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIA 123

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           KL+ L                      + LDLSNN ++ +P  I K+T L +L+L  N +
Sbjct: 124 KLTNL----------------------TQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQI 161

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                               +++PE             I   T L+    +  L    ++
Sbjct: 162 --------------------TQIPE------------AIAKLTNLT----QFILSNNQIT 185

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            IP  I     +T+L LS N I ++P  +++  +L  L L  NKI   P+AI  +L +L+
Sbjct: 186 QIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAI-ANLINLT 244

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN + Q+P    K   + Q++     I  +PE    + L +L +L L   ++ + 
Sbjct: 245 QLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPE--AIAKLTNLTQLDLHSNKITQI 302

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           P  I +L  L  LDL  N +  IPE    LT+LT+LDLSDN+I+ +P E+++
Sbjct: 303 PEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLN 354



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 184/430 (42%), Gaps = 108/430 (25%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-SLGRCLNLSDF-------KAS 145
           + LD+S   + ++P EIG             +L++L S  LG+ +   +F       K S
Sbjct: 19  RELDLSGQELTELPGEIG-------------KLQQLESLILGKKIEAYEFVGDRYLEKVS 65

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N + +LP +L     + KLD+ GN L                          +P+ +  
Sbjct: 66  GNNLKTLPLELLGLPNLRKLDISGNPL------------------------ESIPDVVTQ 101

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           +  L  L L + ++  IP +I+   +L +  + NN ++ +P  + KL+ L  L L +NQ+
Sbjct: 102 ILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQI 161

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            +      +L  L+   LSNN ++ +P  I  +T L +L+L+ N +              
Sbjct: 162 TQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQI-------------- 207

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                 +++PE             I   T L+    +L L    ++ IP  I     +T+
Sbjct: 208 ------TQIPE------------AIANLTNLT----QLDLLNNKITQIPEAIANLINLTQ 245

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           LDL  N I ++P  ++   +L  LILS NKI   P+AI   L++L+ L L +N + Q+P 
Sbjct: 246 LDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAI-AKLTNLTQLDLHSNKITQIPE 304

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
                                      + L +L +L LR  ++ + P  I +L  L  LD
Sbjct: 305 -------------------------AIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLD 339

Query: 505 LSQNSLQSIP 514
           LS NS+ +IP
Sbjct: 340 LSDNSITNIP 349


>gi|354469152|ref|XP_003496994.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cricetulus griseus]
          Length = 855

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 271/573 (47%), Gaps = 63/573 (10%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK-EDLRNLPLLT 71
           ++NL  R L++ P +V+K             A  ++ L L  N I+  K  D  +L  L 
Sbjct: 141 TVNLEARGLQEFPRDVFK-------------AKYVKYLYLDKNQIKTFKVADPGDLLGLE 187

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS +P  I  L  L+ L+ S+N I  IP E+     + +   +SN ++ LPS
Sbjct: 188 ILSLQENGLSSIPLEIHLLTNLRILNASYNQISCIPKELLQLENMRQLFLNSNCIENLPS 247

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L   +NL       N +T++PE L+    +  L++E N+LT+ S     S   L +LI+
Sbjct: 248 DLESLINLETLSLGKNMLTNVPESLSSLKNLQVLNLEYNQLTIFS----KSLCFLPKLIS 303

Query: 192 ---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
              + N++  +P+ I  L  L  L +  N++  +   I     + E  + +N L A+  +
Sbjct: 304 LNLTGNMIGSLPKEIRELKNLENLLMDHNKLTFLSVEIFQLPKIKELQLADNKLEAISPK 363

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +    +L  L+L  N LK+   +  + ++L  L LS+NS+  LP +I ++  L++L ++ 
Sbjct: 364 IENFRELRILNLDKNLLKKIPKKLSRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSR 423

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLP----ENEDSEASTTKE----DLITMATRLSV-- 357
           N +  +   + +      L++  +++     E ++    T  E    +++     L    
Sbjct: 424 NKMIKMAEEISHLSNIISLEFSGNQITHIPIEIKNCRKITRVELNYNNIMYFPVGLCALP 483

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITK-----------------------LDLSRNSIQE 394
           +   LS  G  +S IP ++  + ++                         LD+ +N I+ 
Sbjct: 484 SLDYLSFNGNYISEIPMDVSFSKQLLHLELNTNKLPVLSEHLCSLTNLEYLDVGQNQIKT 543

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +P  +S+  SL+ LI+S NK + +P   L +L +L  L +  N L+++PSD  K +  +Q
Sbjct: 544 IPSCISTMVSLRVLIVSGNKFETFPKE-LCALHNLQVLDISENQLQKLPSDITK-LKGIQ 601

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR---EAPTDILRLQQLRILDLSQNSL 510
            L+LS N  +  P       L  L+ LYL R   R     P ++  + QL+ LD+S N++
Sbjct: 602 KLNLSSNRFSYFP--VELCQLQTLEALYLSRTHGRMLTRLPEELTSMTQLKTLDISNNAI 659

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + IP     L  L  L   +N IS+LPP  +S+
Sbjct: 660 KEIPRNIGELRYLVSLHAYNNQISSLPPSFLSL 692



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/532 (24%), Positives = 217/532 (40%), Gaps = 103/532 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL+   +  +P E+              E  +L+ L++ HN +  L  ++  LP +  
Sbjct: 303 SLNLTGNMIGSLPKEI-------------RELKNLENLLMDHNKLTFLSVEIFQLPKIKE 349

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ NKL  +   I     L+ L++  N + KIP ++     L     S N ++ELP  
Sbjct: 350 LQLADNKLEAISPKIENFRELRILNLDKNLLKKIPKKLSRCVKLECLSLSDNSIEELPRK 409

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + R  NL     S N +  + E+++  S +  L+  GN++T                   
Sbjct: 410 IHRLKNLKQLHVSRNKMIKMAEEISHLSNIISLEFSGNQIT------------------- 450

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +P  I +  ++ R++L+ N I+  P  +    SL       N +S +P ++   
Sbjct: 451 -----HIPIEIKNCRKITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYISEIPMDVSFS 505

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L+L++N+L       C L  L  LD+  N +  +P  I  M +LR L+++GN   
Sbjct: 506 KQLLHLELNTNKLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFE 565

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T    L      AL       + EN+                               L  
Sbjct: 566 TFPKELC-----ALHNLQVLDISENQ-------------------------------LQK 589

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK---IKDWPDAILTSLSS 428
           +PS+I +   I KL+LS N     P EL    +L+ L LSR     +   P+  LTS++ 
Sbjct: 590 LPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHGRMLTRLPEE-LTSMTQ 648

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L + NN ++++P +                            L +L  L+    Q+ 
Sbjct: 649 LKTLDISNNAIKEIPRN-------------------------IGELRYLVSLHAYNNQIS 683

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P   L L+ L+ LDL  N+L ++P    +L SL E++  DN +   P E+
Sbjct: 684 SLPPSFLSLKVLQHLDLRGNNLTALPSAIYSLMSLKEINFDDNPLLRPPVEV 735



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 186/394 (47%), Gaps = 18/394 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V L+ L L+ N+IE+L   +  L  L  L+VS NK+ ++   I  L  + SL+ S
Sbjct: 386 KLSRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLSNIISLEFS 445

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  IP EI +   + + + + N +   P  L    +L     + N I+ +P D++  
Sbjct: 446 GNQITHIPIEIKNCRKITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYISEIPMDVSFS 505

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NKL VLS +L  S T L  L   +N +  +P  I ++  L  L +  N+ 
Sbjct: 506 KQLLHLELNTNKLPVLSEHL-CSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKF 564

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            + P  +    +L    +  N L  LP+++ KL  +  L+L SN+   + VE CQL+ L 
Sbjct: 565 ETFPKELCALHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLE 624

Query: 279 VLDLSNNS---LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L LS      L+ LP E+  MT L+ L ++ N ++ +  ++        L+YL S    
Sbjct: 625 ALYLSRTHGRMLTRLPEELTSMTQLKTLDISNNAIKEIPRNI------GELRYLVSLHAY 678

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N  ++ S+     +++        + L L G NL+A+PS I+    + +++   N +   
Sbjct: 679 N--NQISSLPPSFLSLKVL-----QHLDLRGNNLTALPSAIYSLMSLKEINFDDNPLLRP 731

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           P E+     L T+     +  +  + IL  + ++
Sbjct: 732 PVEVCKGKQLHTIACYLQRADERDEKILEKIFNI 765



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 11/271 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L +  N I+ +   +  +  L VL VS NK    P  +  LH L+ LD+S N + K
Sbjct: 530 NLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFETFPKELCALHNLQVLDISENQLQK 589

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF---KASNNCITSLPEDLADCSKM 162
           +P +I     + K + SSN+    P  L +   L      +     +T LPE+L   +++
Sbjct: 590 LPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHGRMLTRLPEELTSMTQL 649

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N +  +  N I     L  L A  N ++ +P +  SL  L  LDL  N + ++
Sbjct: 650 KTLDISNNAIKEIPRN-IGELRYLVSLHAYNNQISSLPPSFLSLKVLQHLDLRGNNLTAL 708

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           PS+I    SL E    +N L   P E+ K  +L T+  +  +  E   +  +    + ++
Sbjct: 709 PSAIYSLMSLKEINFDDNPLLRPPVEVCKGKQLHTIACYLQRADERDEKILE---KIFNI 765

Query: 283 SNNSLSGLPPEIGK----MTTLRKLLLTGNP 309
             N+++ +  E  K    MTT    +L  NP
Sbjct: 766 VANTITEINFEFLKQKLNMTTSENSILVRNP 796


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 401 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 519

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 520 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 543

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 544 TMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 604 KYLNIDKCPLSTIPPE 619



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 396

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 397 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 449

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 450 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 507

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 508 RRLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 565

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 566 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 598



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 43/417 (10%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           +++  +L RC  +     S + IT +P  + +C  +++L +  NK+  L    I     L
Sbjct: 151 QDVIKALQRC-RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPE-IGCLVSL 208

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  N ++A+ 
Sbjct: 209 RNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVA 268

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L L
Sbjct: 269 DDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDL 328

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L  +  S+ N         L+S                L+ +  R +         
Sbjct: 329 QHNELLDIPDSIGN---------LKS----------------LVRLGMRYN--------- 354

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILT 424
              LS++P+ +     + + ++  N I +LP   L+S + L T+ LSRN+   +P     
Sbjct: 355 --RLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPA 412

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLR 483
             +++  + L++N + ++P   F     L  L++  N+  +LP +    +  ++ EL L 
Sbjct: 413 QFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLD--IGTWVNMVELNLA 470

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              L++ P DI+ LQ L IL LS N L+ IP    NL  L  LDL +N I  LP E+
Sbjct: 471 TNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEI 527


>gi|428171499|gb|EKX40415.1| hypothetical protein GUITHDRAFT_61328, partial [Guillardia theta
           CCMP2712]
          Length = 621

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 234/490 (47%), Gaps = 31/490 (6%)

Query: 67  LPL--LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           LPL  LT L++S N++ ++   +  L  L+ L + +N+I  IP  +G    L       N
Sbjct: 5   LPLGSLTFLDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNLGRLYQLKCLHLQHN 64

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++++ +S G   NL+D   S+N +  +  D      +++L++  N++  L   +     
Sbjct: 65  EIQDIKNSTGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNNRILRLPAEIGMLER 124

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            LT L  S N +  +P  I  LS L +L +  N +  +P +I+   SL+     NN +  
Sbjct: 125 NLTSLSLSNNRIQSLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVT 184

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            P +LG L+ +  L L+ N L     +   L +L +LD+ N  L  +P E+ +   L  L
Sbjct: 185 FPKKLGNLAGMKVLSLNHNFLDSLPADIYHLTKLQILDMCNFMLDTVPKEVFQKLNLENL 244

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKEL 362
            L+GN L  +  ++       +L +L+   L  N   +   +   L+ +        + L
Sbjct: 245 YLSGNILNNIDKNI------GMLVHLKQIFLVHNRLKDLPASFGTLVDL--------QLL 290

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
            L+    S IP  I++   + KL +S N ++ EL PE+ S   L+ L L+ N +   PD 
Sbjct: 291 MLDHNRFSIIPQCIFKLKNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDD 350

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS---LPENPPFSSLPHLQ 478
           I     +L  + L +N L  +P +    +  L++LD+SYN  S   LP+     +L  +Q
Sbjct: 351 I-GKCHNLKEMCLKHNRLYHLP-ETMMFLSGLRLLDVSYNALSTLCLPQQ--LGALTAVQ 406

Query: 479 ELYLR-----RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           EL L        ++   PT I ++  L  L L+ N L  IPE    LT+L  LD+S N +
Sbjct: 407 ELMLEGNMIDATEIDSIPTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDISRNFL 466

Query: 534 SALPPELVSV 543
            +LP E++ +
Sbjct: 467 HSLPSEMIHL 476



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 251/554 (45%), Gaps = 78/554 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM-LKSLDVSFNSIM 104
           +L  L ++HN + K+  D R    LT LN+S+N++  LPA IG L   L SL +S N I 
Sbjct: 78  NLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNNRILRLPAEIGMLERNLTSLSLSNNRIQ 137

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  I   + L K   ++N +++LP ++    +LS  +A NN + + P+ L + + M  
Sbjct: 138 SLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKKLGNLAGMKV 197

Query: 165 LDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPET 202
           L +  N L  L  ++                      +     L  L  S N+LN + + 
Sbjct: 198 LSLNHNFLDSLPADIYHLTKLQILDMCNFMLDTVPKEVFQKLNLENLYLSGNILNNIDKN 257

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L ++ L  NR+  +P+S      L    + +N  S +P  + KL  L  L +  
Sbjct: 258 IGMLVHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSIIPQCIFKLKNLLKLTISF 317

Query: 263 NQLK-EYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           N LK E   E   L+L  +L L+NNSL  LP +IGK   L+++ L  N L  L       
Sbjct: 318 NDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCLKHNRLYHL------- 370

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSA-----I 372
             P  + +L   RL +   +  ST     + +  +L   +  +EL LEG  + A     I
Sbjct: 371 --PETMMFLSGLRLLDVSYNALST-----LCLPQQLGALTAVQELMLEGNMIDATEIDSI 423

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+ I++   +  L L+ N + E+P  +S   +L TL +SRN +   P  ++     L+ L
Sbjct: 424 PTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDISRNFLHSLPSEMIHLSLELTNL 483

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L  N + ++P    +++  LQ LDLS N  +L      S    L  +   + Q+R  P 
Sbjct: 484 NLSVNKITRIPL-SIQNLTNLQSLDLSKNDLTLIP-AEISRCTALTSIEFEQNQIRFLPK 541

Query: 493 DILRLQQLRILDLSQN-----------------------------SLQSIPEGFKNLTSL 523
            I  L+ LR L+L +N                             +L+S+P+   +L +L
Sbjct: 542 AIGALKNLRTLNLKKNSLTSLPLSLSDIPNLSNLEIDHVLNINNLALRSVPQEVGDLVTL 601

Query: 524 TELDLSDNNISALP 537
             L++S+N I  +P
Sbjct: 602 KILNISNNQIVEIP 615



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 231/540 (42%), Gaps = 70/540 (12%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK--NFDE----AGEGDKWWEAV----DLQKLILAHNNIE 58
           R   SL+LSN  ++ +P+ + K  N  +    A   +K  +A+     L  L   +N + 
Sbjct: 124 RNLTSLSLSNNRIQSLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVV 183

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
              + L NL  + VL+++HN L  LPA I  L  L+ LD+    +  +P E+     L  
Sbjct: 184 TFPKKLGNLAGMKVLSLNHNFLDSLPADIYHLTKLQILDMCNFMLDTVPKEVFQKLNLEN 243

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
              S N L  +  ++G  ++L      +N +  LP        +  L ++ N+ +++   
Sbjct: 244 LYLSGNILNNIDKNIGMLVHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSIIPQC 303

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           +     +L   I+  +L   +   +GSL  L  L L+ N +  +P  I  C +L E  + 
Sbjct: 304 IFKLKNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCLK 363

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           +N L  LP  +  LS L  LD+  N L   C                    LP ++G +T
Sbjct: 364 HNRLYHLPETMMFLSGLRLLDVSYNALSTLC--------------------LPQQLGALT 403

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPE----NEDSEASTTKEDLITM-- 351
            +++L+L GN +    + + + PTP   + +L S        NE  E+ +   +L+T+  
Sbjct: 404 AVQELMLEGNMIDA--TEIDSIPTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDI 461

Query: 352 -----------ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                         LS+    L+L    ++ IP  I     +  LDLS+N +  +P E+S
Sbjct: 462 SRNFLHSLPSEMIHLSLELTNLNLSVNKITRIPLSIQNLTNLQSLDLSKNDLTLIPAEIS 521

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
            C +L ++   +N+I+  P AI  +L +L  L L  N           DIP L  L++ +
Sbjct: 522 RCTALTSIEFEQNQIRFLPKAI-GALKNLRTLNLKKN-SLTSLPLSLSDIPNLSNLEIDH 579

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
                              L +  + LR  P ++  L  L+IL++S N +  IP  F  L
Sbjct: 580 ------------------VLNINNLALRSVPQEVGDLVTLKILNISNNQIVEIPVFFAQL 621



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 156/340 (45%), Gaps = 41/340 (12%)

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P +I  L  L  LD+ +NRI  +   +    SL + +M  N +S +P  LG+L +L  L 
Sbjct: 1   PPSILPLGSLTFLDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNLGRLYQLKCLH 60

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L  N++++       L  L+ LD+S+N L  + P+      L +L ++ N  R LR    
Sbjct: 61  LQHNEIQDIKNSTGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNN--RILR---- 114

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
               PA +  L   L                            LSL    + ++PS I +
Sbjct: 115 ---LPAEIGMLERNL--------------------------TSLSLSNNRIQSLPSNISK 145

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +TKL ++ N +++LP  ++   SL  L    NK+  +P   L +L+ +  L L++N 
Sbjct: 146 LSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKK-LGNLAGMKVLSLNHNF 204

Query: 439 LRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  +P+D +  +  LQILD+ ++ + ++P+   F  L +L+ LYL    L     +I  L
Sbjct: 205 LDSLPADIYH-LTKLQILDMCNFMLDTVPK-EVFQKL-NLENLYLSGNILNNIDKNIGML 261

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L+ + L  N L+ +P  F  L  L  L L  N  S +P
Sbjct: 262 VHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSIIP 301



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 31/50 (62%)

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P  IL L  L  LD+S+N ++ + EG   L+SL +L +  NNIS +PP L
Sbjct: 1   PPSILPLGSLTFLDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNL 50


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 206/436 (47%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 237 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N + S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 344 GNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 404 NQFASYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 462

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 463 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENR 522

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L+                       RL + + ++++     
Sbjct: 523 IEVLPHEI------GLLHELQ-----------------------RLILQTNQITM----- 548

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P  I   G +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 549 --LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 606

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 607 KYLNIDKCPLSTIPPE 622



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP  +G  ++L +   + N +TSL
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +CS++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L +  N L+ +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 344 GNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGI----TQLPDGMLASLSGLTTI 399

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 400 TLSRNQFASYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 452

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P+    ++
Sbjct: 453 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIPNT-IGNL 510

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 511 RRLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 568

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 569 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 601



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 44/419 (10%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT +P  + +C  +++L +  NK+  L    I    
Sbjct: 151 QDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPE-IGCLV 209

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  N ++A
Sbjct: 210 SLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA 269

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 270 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 329

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N         L+S                L+ +  R +       
Sbjct: 330 DLQHNELLDIPDSIGN---------LKS----------------LVRLGMRYN------- 357

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAI 422
                L+++P+ +     + + ++  N I +LP   L+S + L T+ LSRN+   +P   
Sbjct: 358 ----RLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGG 413

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELY 481
               +++  + L++N + ++P   F     L  L++  N+  +LP +    +  ++ EL 
Sbjct: 414 PAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLD--IGTWVNMVELN 471

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L    L++ P DI+ LQ L IL LS N L+ IP    NL  L  LDL +N I  LP E+
Sbjct: 472 LATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEI 530


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L++N ++ L +++R L  L  L +  N+L+ LP  IG+L  L+ L +  N +M 
Sbjct: 116 NLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   + S NQ+K +P  + +   L      NN +T+LP ++    K+ +L
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQEL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L +L    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 236 SLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 295 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 355 NQLTTLPNEIGQLQNLQELYLIDNQL 380



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 168/369 (45%), Gaps = 39/369 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG L  L+ L +S+N +  +P EIG    L   +   NQLK LP 
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLHL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N+I +IP  I     L    +GNN L+ALP E+G+
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 229 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 289 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
             P EI +   +  LDL  N +  LP E+    +LQ   L+ N++   P+ I   L +L 
Sbjct: 313 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEI-GQLQNLQ 371

Query: 431 CLKLDNNPL 439
            L L +N L
Sbjct: 372 ELYLIDNQL 380



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     K   +  +L+ L L HN ++ L E+
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L +    +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL   + S N I ++P+++    K+  L +  N+LT L N  I   
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE-IGQL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+
Sbjct: 230 QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  ++ +L  L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+ 
Sbjct: 290 TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349

Query: 303 LLLTGNPLRTL 313
             L  N L TL
Sbjct: 350 FELNNNQLTTL 360



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 159/349 (45%), Gaps = 47/349 (13%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P+T   L+  I+       LDL Q ++ ++P  I    +L E Y+  N L  LP E+G+L
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  NQLK    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 92  QNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL + +        LK L+                               L L    L  
Sbjct: 152 TLPTEI------GQLKNLQR------------------------------LHLWNNQLMT 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI +   +  L+LS N I+ +P E+     LQ+L L  N++   P+ I   L  L  
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI-GQLQKLQE 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L  N L  +P++    +  LQ L L  N  ++  N     L +LQ LYLR  +L    
Sbjct: 235 LSLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLS 292

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+
Sbjct: 293 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 341



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 234 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 281 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP ++     + +L +  N+L+
Sbjct: 341 IGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQLS 381


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 212/454 (46%), Gaps = 52/454 (11%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L+  R    L+L +  L ++P+ +YK                L  L L  N I  + ++L
Sbjct: 198 LQNLRHLKVLDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIRIVGDNL 244

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           +NL  LT+L++  NK+ ELPAAIG L  L +LD+S N +  +P  IG+   L   D   N
Sbjct: 245 KNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHN 304

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ++P ++G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS +
Sbjct: 305 DLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLS 364

Query: 185 MLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N  +  P       + +  ++L  N+I  I   I S    L +  M  NAL
Sbjct: 365 NLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENAL 424

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++LP ++G  +++  L+  +N L +   +  C   L +L LSNN L  +P  IG +  LR
Sbjct: 425 TSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLR 484

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L +L S +       LL  L                              ++
Sbjct: 485 VLDLEENRLESLPSEI------GLLHDL------------------------------QK 508

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L+   L+++P  I     +T L +  N++Q LP E+ +  +L++L ++ N        
Sbjct: 509 LILQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLIKLPY 568

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            L    +L+ + ++N PL  +P +     P L I
Sbjct: 569 ELALCQNLAIMSIENCPLSALPPEVVSGGPSLVI 602



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 211/462 (45%), Gaps = 83/462 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 180 NLKTLALNENSLTSLPDSLQNLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRI 239

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + + L       N++ ELP+++G  +NL+    S+N +  LP+ + +C  ++ L
Sbjct: 240 VGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTAL 299

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+LS L+RL L  N++ SIP++
Sbjct: 300 DLQHNDLL------------------------DIPETIGNLSNLMRLGLRYNQLTSIPAT 335

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y               +
Sbjct: 336 LRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINL 395

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS-- 316
           E  Q+             L+ L++  N+L+ LP +IG  T + +L    N L  L     
Sbjct: 396 EHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 455

Query: 317 -LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            L N     L   L  R+P            + I    +L V    L LE   L ++PSE
Sbjct: 456 CLQNLEILILSNNLLKRIP------------NTIGNLKKLRV----LDLEENRLESLPSE 499

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL- 434
           I    ++ KL L  N +  LP  +    +L  L +  N ++  P+ I T L +L  L + 
Sbjct: 500 IGLLHDLQKLILQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGT-LENLESLYIN 558

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLP-ENPPFSSLP 475
           DN  L ++P +          L L  N+A +  EN P S+LP
Sbjct: 559 DNASLIKLPYE----------LALCQNLAIMSIENCPLSALP 590



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 168/370 (45%), Gaps = 46/370 (12%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL ++ I  IPSS+  C SL EFY+  N +S+LP E+G L+ L TL L+ N L     
Sbjct: 137 RLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPD 196

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               LR L VLDL +N LS +P  I K+ TL  L L  N +R +  +L N     +L   
Sbjct: 197 SLQNLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTMLS-- 254

Query: 330 RSRLPENEDSEASTTKEDLITMAT-RLS--------------VTSKELSLEGMNLSAIPS 374
              L EN+  E       L+ + T  LS              V    L L+  +L  IP 
Sbjct: 255 ---LRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPE 311

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            I     + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L
Sbjct: 312 TIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITL 371

Query: 435 DNNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP-- 475
             N     PS G   F ++  +     QI  + Y I S         + EN   +SLP  
Sbjct: 372 SRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLD 430

Query: 476 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
                 + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +
Sbjct: 431 IGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEE 490

Query: 531 NNISALPPEL 540
           N + +LP E+
Sbjct: 491 NRLESLPSEI 500



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 219/481 (45%), Gaps = 51/481 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 135 IQRLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSL 194

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +   +  LD+  NKL+ + + +I     LT L    N +  + + + +LS L  L
Sbjct: 195 PDSLQNLRHLKVLDLRHNKLSEIPD-VIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTML 253

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P++I    +L    + +N L  LP  +G    L  LDL  N L +     
Sbjct: 254 SLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPETI 313

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----RSSLVNGPTPALLK 327
             L  L  L L  N L+ +P  +   T + +  + GN +  L     +SL N  T  L +
Sbjct: 314 GNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 373

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
                 P    ++ +             +VTS  ++LE   +  I   I+  A  +TKL+
Sbjct: 374 NAFHSYPSGGPAQFT-------------NVTS--INLEHNQIDKIQYGIFSRAKGLTKLN 418

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N++  LP ++ +   +  L    N +   PD I   L +L  L L NN L+++P + 
Sbjct: 419 MKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI-HCLQNLEILILSNNLLKRIP-NT 476

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L++LDL  N + SLP       L  LQ+L L+  QL   P  I  L  L  L +
Sbjct: 477 IGNLKKLRVLDLEENRLESLPSE--IGLLHDLQKLILQSNQLNSLPRTIGHLTNLTYLSV 534

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNN------------------------ISALPPELV 541
            +N+LQ +PE    L +L  L ++DN                         +SALPPE+V
Sbjct: 535 GENNLQFLPEEIGTLENLESLYINDNASLIKLPYELALCQNLAIMSIENCPLSALPPEVV 594

Query: 542 S 542
           S
Sbjct: 595 S 595


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 221/437 (50%), Gaps = 26/437 (5%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L+   NNI +LK        LT+LN+  N L++LP +IG+L  L+ LD+  N +  +P  
Sbjct: 212 LVALPNNIGQLKN-------LTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPIS 264

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG   +L K D  +NQL  LP+S+G+  NL       N +TSL +D+    ++  L++  
Sbjct: 265 IGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRR 324

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L N+ I     L  L  S N L  +P++ G L +L  L+L  N   ++ + +   
Sbjct: 325 NRLTTLPNS-IGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQL 383

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL + Y+ +N L+ LP  +G+L +L  L L  N+L        QL+ L  LDL  N LS
Sbjct: 384 KSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLS 443

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G++  L +L +  NPL TL +S+  G    L K   +   +   S AS      
Sbjct: 444 TLPESLGQLKKLEELNIGANPLVTLPNSI--GKLKNLKKLYLATANQTPKSFAS------ 495

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           IT  T L    +EL L    L  +P+ I +   + KL+L  N I  +P  +    +LQ L
Sbjct: 496 ITQITSL----EELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQAL 551

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPE 467
           IL  NK+      I   L S+  L L +N L  +P      +  L+ L+LSY N+ SLPE
Sbjct: 552 ILGNNKLTVLTQNI-GQLESILRLDLSSNKLTTLP-QSIGKLKKLKQLNLSYNNLKSLPE 609

Query: 468 NPPFSSLPHLQELYLRR 484
           +     L +L++L LR+
Sbjct: 610 H--IGQLKNLKDLNLRK 624



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 227/468 (48%), Gaps = 43/468 (9%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ HN+L+ LPA IGEL  LK L++ +N                       QL  LP+S
Sbjct: 42  LNLEHNQLTTLPANIGELKNLKKLNLEYN-----------------------QLTTLPAS 78

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN-KLTVLSNNLIASWTMLTELIA 191
             +  NL +   + N  T+LP  +     + +L++  N  L  L +N I     L +L  
Sbjct: 79  FAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDN-IEQLKNLQKLNL 137

Query: 192 SKNL-LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
           + NL L  +PE I  L +L  L+L+ +  + +P++I    SL   +M ++ L+ LP    
Sbjct: 138 TSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFS 197

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L+L S+ L        QL+ L++L+L  N L+ LP  IG++ +L KL L GN 
Sbjct: 198 QLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQ 257

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L  L  S+  G   +L K     L  N+ +   T+   L  +        ++L LE   L
Sbjct: 258 LTILPISI--GQLKSLKKL---DLGANQLTTLPTSIGQLKNL--------QQLFLEVNTL 304

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           +++  +I +  ++  L+L RN +  LP  +    SL+ L LS NK+   P +    L  L
Sbjct: 305 TSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSF-GQLKKL 363

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L+ N  + + +   +   + ++   S N+ +LPEN     LP LQ L L R +L  
Sbjct: 364 EELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPEN--IGQLPELQYLTLVRNKLDR 421

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            P  I +LQ+L+ LDL +N L ++PE    L  L EL++  N +  LP
Sbjct: 422 LPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLP 469



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 168/589 (28%), Positives = 260/589 (44%), Gaps = 103/589 (17%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY +  EA    K  E V   KL L HN +  L  ++  L  L  LN+ +N+L+ LPA
Sbjct: 23  NKVYMSLTEAL---KTPEQV--YKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPA 77

Query: 86  AIGELHMLKSLDVSFN------------------------SIMKIPDEIGSATALVKFDC 121
           +  +L  L+ L+++ N                        S+ K+PD I     L K + 
Sbjct: 78  SFAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNL 137

Query: 122 SSN-QLKELPSSLG-----RCLNLSD------------------FKASNNCITSLPEDLA 157
           +SN  LK+LP ++      + LNL+                      +++ +T+LPE+ +
Sbjct: 138 TSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFS 197

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               +  L+++ + L  L NN I     LT L   +N L  +P +IG L  L +LDL  N
Sbjct: 198 QLHNLKVLNLKSSGLVALPNN-IGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGN 256

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P SI    SL +  +G N L+ LP  +G+L  L  L L  N L     +  +L+ 
Sbjct: 257 QLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQ 316

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL+L  N L+ LP  IG++ +LR L L+ N L  L  S         LK L       
Sbjct: 317 LKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSF------GQLKKLE------ 364

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E +      + ++T+  +L  + K+L L   NL+ +P  I +  E+  L L RN +  LP
Sbjct: 365 ELNLEGNYFQTMLTILGQLK-SLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLP 423

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-SDGFKDIPMLQI 455
             +     LQ L L RN++   P++ L  L  L  L +  NPL  +P S G         
Sbjct: 424 ESIGQLQELQYLDLRRNRLSTLPES-LGQLKKLEELNIGANPLVTLPNSIGKLKNLK--- 479

Query: 456 LDLSYNIASLPENPP-FSSLPH---LQELYLRRMQLREAPTDIL---------------- 495
                 +A+  + P  F+S+     L+ELYL   +L   PT I                 
Sbjct: 480 ---KLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQIS 536

Query: 496 -------RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
                  +L+ L+ L L  N L  + +    L S+  LDLS N ++ LP
Sbjct: 537 IVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLP 585



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 1/271 (0%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +   L++L L  N  + +   L  L  L  L ++ N L+ LP  IG+L  L+ L +  
Sbjct: 357 FGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVR 416

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+ IG    L   D   N+L  LP SLG+   L +     N + +LP  +    
Sbjct: 417 NKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSIGKLK 476

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + KL +     T  S   I   T L EL    N L+ +P +I  L  L +L+L  N+I 
Sbjct: 477 NLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQIS 536

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
            +P SI    +L    +GNN L+ L   +G+L  +  LDL SN+L           +L  
Sbjct: 537 IVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQ 596

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L+LS N+L  LP  IG++  L+ L L  NP+
Sbjct: 597 LNLSYNNLKSLPEHIGQLKNLKDLNLRKNPI 627



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L++L L  N ++ L   ++ L  L  LN+ +N++S +P +IG+L  L++L +  N 
Sbjct: 498 QITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNNK 557

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +   IG   ++++ D SSN+L  LP S+G+   L     S N + SLPE +     +
Sbjct: 558 LTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLKSLPEHIGQLKNL 617

Query: 163 SKLDVEGNKLTVLSNNLIASW 183
             L++  N ++      I  W
Sbjct: 618 KDLNLRKNPISATEKEKIKKW 638


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 215/449 (47%), Gaps = 60/449 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ VYK                L  L L  N I  + +++R L  LT+L
Sbjct: 158 LDLRHNKLNDIPDVVYK-------------LTSLTTLFLRFNRIRYVDDEIRFLTSLTML 204

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + DVS N +  +P+EIG    L   D   N+L ++P ++
Sbjct: 205 SLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTI 264

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N ++ +P  L++C  M + +VEGN ++ L   L++S + LT +  S+
Sbjct: 265 GELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSR 324

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  S+   +D   L  N+I  IP  I S    L +  M  N L++LP ++
Sbjct: 325 NNFAAYPS--GGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDV 382

Query: 250 GKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G  + +  L+L +NQL +    ++A Q  L VL LSNN L  +PP +G +  LR L L  
Sbjct: 383 GTWTNMVELNLGTNQLGKLPDDIQALQ-ALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEE 441

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L         P  + YLR                DL     RL V S +      
Sbjct: 442 NRLEQL---------PNEIGYLR----------------DL----QRLIVQSNQ------ 466

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSL 426
            L+++P  I     +  L +  N++  LP E+ +  +L++L ++ N  + + P   L   
Sbjct: 467 -LTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLYVNDNPSLHNLPFE-LALC 524

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           S+L  + ++N PL Q+P++     P L I
Sbjct: 525 SNLQIMSIENCPLSQIPAEIVAGGPSLVI 553



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 220/484 (45%), Gaps = 103/484 (21%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N++  L + L +L  L VL++ HNKL+++P  + +L  L +L + FN I  
Sbjct: 131 NLQTLALSENSLTSLPDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFNRIRY 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + DEI   T+L       N++KELP+ +G+ +NL  F  S+N +  LPE++  C  +S L
Sbjct: 191 VDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTL 250

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG L +L RL L  NR+  IPSS
Sbjct: 251 DLQHNELL------------------------DIPDTIGELQQLTRLGLRYNRLSFIPSS 286

Query: 226 ISGCCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGTLDL 260
           +S C  + EF +  NA+S LP  L                          + + + +++L
Sbjct: 287 LSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDSINL 346

Query: 261 HSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             NQ+ +  Y + +    L+ L++  N L+ LP ++G  T + +L L  N L        
Sbjct: 347 EHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQL-------- 398

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                        +LP  +D +A    E L+              L    L  IP  +  
Sbjct: 399 ------------GKLP--DDIQALQALEVLV--------------LSNNLLRRIPPSVGN 430

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             ++  LDL  N +++LP E+     LQ LI+  N++   P AI   L++L  L +  N 
Sbjct: 431 LRKLRVLDLEENRLEQLPNEIGYLRDLQRLIVQSNQLTSLPRAI-GHLANLVFLSVGENN 489

Query: 439 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAP 491
           L  +P    ++I  L+ L+  Y    + +NP   +LP       +LQ + +    L + P
Sbjct: 490 LAYLP----EEIGTLENLESLY----VNDNPSLHNLPFELALCSNLQIMSIENCPLSQIP 541

Query: 492 TDIL 495
            +I+
Sbjct: 542 AEIV 545



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 210/453 (46%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LK LD+S ++I  +P  +     L +     N+L  LP  +G   NL     S N +TSL
Sbjct: 86  LKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLEIGCLTNLQTLALSENSLTSL 145

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L     +  LD+  NKL  + + ++   T LT L    N +  + + I  L+ L  L
Sbjct: 146 PDSLMSLKSLKVLDLRHNKLNDIPD-VVYKLTSLTTLFLRFNRIRYVDDEIRFLTSLTML 204

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LP E+G+   L TLDL  N+L +     
Sbjct: 205 SLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTI 264

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L+ L L  N LS +P  +     + +  + GN +    S L  G   +L +    
Sbjct: 265 GELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAI----SQLPEGLLSSLSELTSI 320

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N  +   +      T           ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 321 TLSRNNFAAYPSGGPSQFT-------NVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKEN 373

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L  N++   PD I  +L +L  L L NN LR++P     ++
Sbjct: 374 QLTSLPLDVGTWTNMVELNLGTNQLGKLPDDI-QALQALEVLVLSNNLLRRIPP-SVGNL 431

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L++LDL  N +  LP       L  LQ L ++  QL   P  I  L  L  L + +N+
Sbjct: 432 RKLRVLDLEENRLEQLPNE--IGYLRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENN 489

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           L  +PE    L +L  L ++DN ++  LP EL 
Sbjct: 490 LAYLPEEIGTLENLESLYVNDNPSLHNLPFELA 522



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L    ++HN++E L E++     L+ L++ HN+L ++P  IGEL  L  L + +N + 
Sbjct: 222 VNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRLS 281

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSS-------------------------------- 132
            IP  + +   + +F+   N + +LP                                  
Sbjct: 282 FIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNV 341

Query: 133 -----------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                              R  +L+      N +TSLP D+   + M +L++  N+L  L
Sbjct: 342 DSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGKL 401

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            ++ I +   L  L+ S NLL  +P ++G+L +L  LDL +NR+  +P+ I     L   
Sbjct: 402 PDD-IQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYLRDLQRL 460

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPE 293
            + +N L++LP  +G L+ L  L +  N L     E   L  L  L +++N SL  LP E
Sbjct: 461 IVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLYVNDNPSLHNLPFE 520

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +   + L+ + +   PL  + + +V G    +++YL+ + P
Sbjct: 521 LALCSNLQIMSIENCPLSQIPAEIVAGGPSLVIQYLKMQGP 561


>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
 gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
          Length = 641

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 203/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITTVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +TS+P  L +C  M + +VEGN +T L + ++AS   LT +  S+
Sbjct: 341 GNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSR 400

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 401 NQFTSYP-TGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 519

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 520 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 543

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I    ++T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 544 TMLPRSIGHLSQLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 604 KYLNIDKCPLSTIPPE 619



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 220/463 (47%), Gaps = 42/463 (9%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP+ +     L +    SN++ +LP+ +G  +NL +   + N +TSL
Sbjct: 162 IKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 221

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L  C+++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 222 PDSLQHCNQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITTVADDLRQLVNLTML 280

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G                  CV  
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGN-----------------CVN- 322

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               LS LDL +N L  +P  IG + +L +L L  N L ++ +SL N  +        + 
Sbjct: 323 ----LSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNG 378

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSK------------ELSLEGMNLSAIPSEIW-EA 379
           + +  D   ++     I   +R   TS              ++LE   +  IP  I+  A
Sbjct: 379 ITQLPDGMLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRA 438

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +TKL++  N +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L
Sbjct: 439 KGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNML 497

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           +++P +   ++  L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L 
Sbjct: 498 KKIP-NTIGNLRKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLS 554

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           QL  L +S+N+LQ +PE   +L SL  L ++ N  +  LP EL
Sbjct: 555 QLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 597



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 195/417 (46%), Gaps = 23/417 (5%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT +P  + +C  +++L +  NK+  L    I    
Sbjct: 148 QDVIKALQRCRDEGIKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTE-IGCLV 206

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +P+++   ++L  LDL  N++  IP  I    SL   Y+  N ++ 
Sbjct: 207 NLRNLALNENSLTSLPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITT 266

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 267 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 326

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N     L   +R  L  N  +    + ++  +M         E +
Sbjct: 327 DLQHNELLDIPDSIGN-----LKSLVRLGLRYNRLTSVPASLKNCKSM--------DEFN 373

Query: 364 LEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDA 421
           +EG  ++ +P  +  +   +T + LSRN     P    +   ++  + L  N+I   P  
Sbjct: 374 VEGNGITQLPDGMLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYG 433

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L +L+ L
Sbjct: 434 IFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQNLEIL 490

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L    L++ P  I  L++LRILDL +N ++ +P     L  L  L L  N I+ LP
Sbjct: 491 ILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLP 547


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 214/458 (46%), Gaps = 60/458 (13%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L   R+   L+L +  L D+P  VYK                L  L L  N I  + + +
Sbjct: 151 LAHLRSLKVLDLRHNKLSDIPEVVYK-------------LTSLTTLFLRFNRIRVVGDGI 197

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  LT+L++  NK+ EL + IG+L  L + DVS N +  +P EIG+   L   D   N
Sbjct: 198 ANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHN 257

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G    L+      N + ++P  L++C  M + +VEGN ++ L + L+ S T
Sbjct: 258 ELLDIPDTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPDGLLCSLT 317

Query: 185 MLTELIASKNLL----NGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGN 239
            LT L  S+N      +G P    S+S    ++L  N+I  IP  I S   +L +  M  
Sbjct: 318 ELTSLTLSRNSFMSYPSGGPAQFTSVS---SINLEHNQIDKIPYGIFSRAKNLTKLIMKE 374

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP ++G  + +  L+L +NQL +   +   L  L VL LSNN L  +PP IG + 
Sbjct: 375 NLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLR 434

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L L  N +  L         P  + +L+                            
Sbjct: 435 KLRVLDLEENKIEIL---------PNEIGFLQEL-------------------------- 459

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKD 417
            K+L ++   L+++P  I     +T L +  N++Q LP E+ +  +L++L L+ N  + +
Sbjct: 460 -KKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLENLESLYLNDNPNLCN 518

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            P  +   + SL  + ++N PL  +P D     P L I
Sbjct: 519 LPFELALCV-SLQIMSIENCPLTSLPPDVVSSGPSLVI 555



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 218/452 (48%), Gaps = 20/452 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  +P  +   T LV+F    N+L  LP+  G   NL     + N +TSL
Sbjct: 88  VKRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSL 147

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ LA    +  LD+  NKL+ +   ++   T LT L    N +  + + I +L+ L  L
Sbjct: 148 PDSLAHLRSLKVLDLRHNKLSDIPE-VVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTML 206

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S I    +L  F + +N L  LP E+G    L TLDL  N+L +     
Sbjct: 207 SLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDTI 266

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L+ + L  N L+ +P  +     + +  + GN +    S L +G   +L +    
Sbjct: 267 GNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSI----SQLPDGLLCSLTELTSL 322

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N      +      T     SV+S  ++LE   +  IP  I+  A  +TKL +  N
Sbjct: 323 TLSRNSFMSYPSGGPAQFT-----SVSS--INLEHNQIDKIPYGIFSRAKNLTKLIMKEN 375

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L  N++   PD I  SL +L  L L NN L+++P     ++
Sbjct: 376 LLTSLPLDIGTWTNMVELNLGTNQLVKLPDDI-QSLINLEVLILSNNLLKRIPP-SIGNL 433

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L++LDL  N I  LP    F  L  L++L ++  QL   P  I  L  L  L + +N+
Sbjct: 434 RKLRVLDLEENKIEILPNEIGF--LQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENN 491

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           LQ +PE    L +L  L L+DN N+  LP EL
Sbjct: 492 LQYLPEEIGTLENLESLYLNDNPNLCNLPFEL 523



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 213/460 (46%), Gaps = 79/460 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N++  L + L +L  L VL++ HNKLS++P  + +L  L +L + FN I  
Sbjct: 133 NLQTLALNENSLTSLPDSLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRV 192

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N++KEL S +G+ +NL  F  S+N +  LP+++ +C  +S L
Sbjct: 193 VGDGIANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTL 252

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +P+TIG+L  L R+ L  NR+ +IP+S
Sbjct: 253 DLQHNELL------------------------DIPDTIGNLQALNRIGLRYNRLNAIPAS 288

Query: 226 ISGCCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGTLDL 260
           +S C  + EF +  N++S LP  L                          + + + +++L
Sbjct: 289 LSNCKHMDEFNVEGNSISQLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSSINL 348

Query: 261 HSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---S 315
             NQ+ +  Y + +    L+ L +  N L+ LP +IG  T + +L L  N L  L     
Sbjct: 349 EHNQIDKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQ 408

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           SL+N     L   L  R+P +            I    +L V    L LE   +  +P+E
Sbjct: 409 SLINLEVLILSNNLLKRIPPS------------IGNLRKLRV----LDLEENKIEILPNE 452

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I    E+ KL +  N +  LP  +    +L  L +  N ++  P+ I T L +L  L L+
Sbjct: 453 IGFLQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGT-LENLESLYLN 511

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           +NP          ++P    L +S  I S+ EN P +SLP
Sbjct: 512 DNP-------NLCNLPFELALCVSLQIMSI-ENCPLTSLP 543



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 41/263 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS +S++ LPP +  +T L +  L GN L  L         PA    L          
Sbjct: 91  LDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVAL---------PAEFGCL---------- 131

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                        T L    + L+L   +L+++P  +     +  LDL  N + ++P  +
Sbjct: 132 -------------TNL----QTLALNENSLTSLPDSLAHLRSLKVLDLRHNKLSDIPEVV 174

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               SL TL L  N+I+   D I  +L++L+ L L  N ++++ S G   +  L   D+S
Sbjct: 175 YKLTSLTTLFLRFNRIRVVGDGI-ANLTNLTMLSLRENKIKEL-SSGIGKLVNLVTFDVS 232

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           +N +  LP+     +  +L  L L+  +L + P  I  LQ L  + L  N L +IP    
Sbjct: 233 HNHLEHLPQE--IGNCVNLSTLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNAIPASLS 290

Query: 519 NLTSLTELDLSDNNISALPPELV 541
           N   + E ++  N+IS LP  L+
Sbjct: 291 NCKHMDEFNVEGNSISQLPDGLL 313


>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
          Length = 529

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 187/414 (45%), Gaps = 43/414 (10%)

Query: 37  EGDK---WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHML 93
           EGD     ++   L +L + HN + +L   L NL  L  L+ S NKL+E+P+ +GEL  L
Sbjct: 127 EGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKAL 186

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + L +  N +  IP+ I   T+L   D S NQLK LP  +G C NL+      N +  +P
Sbjct: 187 QKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVIP 246

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + +  C K+   +VE N+++    + +   TM+  L  S+N    +P+ +  L  L   D
Sbjct: 247 DSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPD-LSKLDNLTAFD 305

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
              N+I S+   +     + +  + NN +  +P E+     +  LD+ SN L+   V   
Sbjct: 306 GSFNKISSLRPKVFALPKILKVLLHNNLIKIIPPEIAIWKTVTELDISSNLLESVSVGIG 365

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            L +L  L +SNN L  LP  IG M  LR L L  N +  + S                 
Sbjct: 366 NLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSD---------------- 409

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                           I   T L V    L+L    +  +P++I     + KL L  N +
Sbjct: 410 ----------------IGFCTNLEV----LNLTSNKIEQLPTDIGSLQRLRKLLLGENDL 449

Query: 393 QELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            ++PP +    SLQ L ++ N  + + P+  L +  SL  L +D  PL ++P +
Sbjct: 450 LQIPPHIGMLDSLQELFINSNLNLHNLPEH-LANCRSLQILSIDKCPLSEIPDE 502



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 251/565 (44%), Gaps = 113/565 (20%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           A+++S S+     SL+D P +        G   K +  +D        ++ EK+K+ +R 
Sbjct: 2   ASKSSRSV-----SLKDFPKK-------RGASSKDYRKLD-------RSDQEKIKKLIRE 42

Query: 67  LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
               T L++S      + A I EL   L++L V  N I  +P EIG              
Sbjct: 43  SKGATTLDLSDQNNHSMSANISELAKTLQNLYVQKNKIHTLPREIG-------------- 88

Query: 126 LKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
                     CL  +  F AS N I+SLPE LA+ + + +LD+  NKL      +I   +
Sbjct: 89  ----------CLREMQIFAASENQISSLPESLANLTSLKRLDLRHNKLEGDVPLVIYQLS 138

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR-----------------------ILS 221
            L EL  + N L  +   +G+L  L+ LD  QN+                       + S
Sbjct: 139 SLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKALQKLMLKSNHLTS 198

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 279
           IP +IS C SL+   M +N L +LP ++G    L +L L  N+L+     ++ C+ +L  
Sbjct: 199 IPEAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVIPDSIDQCK-KLVH 257

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
            ++ +N +S  PP   K  T+ ++L         R++  + P  + L  L +   +   +
Sbjct: 258 FNVESNQISCFPPSFLKKCTMIQVLTIS------RNTFKDIPDLSKLDNLTAF--DGSFN 309

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           + S+ +  +  +   L V      L    +  IP EI     +T+LD+S N ++ +   +
Sbjct: 310 KISSLRPKVFALPKILKVL-----LHNNLIKIIPPEIAIWKTVTELDISSNLLESVSVGI 364

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDL 458
            +   LQ L +S N+++  PD I  S+ +L  L+LD N +  VPSD GF     L++L+L
Sbjct: 365 GNLDQLQELKISNNRLEFLPDTI-GSMKALRVLELDENKIEYVPSDIGF--CTNLEVLNL 421

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
           + N                        ++ + PTDI  LQ+LR L L +N L  IP    
Sbjct: 422 TSN------------------------KIEQLPTDIGSLQRLRKLLLGENDLLQIPPHIG 457

Query: 519 NLTSLTELDLSDN-NISALPPELVS 542
            L SL EL ++ N N+  LP  L +
Sbjct: 458 MLDSLQELFINSNLNLHNLPEHLAN 482



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 212/478 (44%), Gaps = 43/478 (8%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  LQ L +  N I  L  ++  L  + +   S N++S LP ++  L  LK LD+  N +
Sbjct: 67  AKTLQNLYVQKNKIHTLPREIGCLREMQIFAASENQISSLPESLANLTSLKRLDLRHNKL 126

Query: 104 M-KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P  I   ++L++   + N+L  L S LG   NL     S N +T +P +L +   +
Sbjct: 127 EGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKAL 186

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            KL ++ N LT +    I+  T L+ L  S N L  +PE IG+   L  L L  NR+  I
Sbjct: 187 QKLMLKSNHLTSIP-EAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVI 245

Query: 223 PSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           P SI  C  L  F + +N +S   P+ L K + +  L +  N  K+    +    L+  D
Sbjct: 246 PDSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPDLSKLDNLTAFD 305

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            S N +S L P++  +  + K+LL  N ++ +       P  A+ K +        + + 
Sbjct: 306 GSFNKISSLRPKVFALPKILKVLLHNNLIKII------PPEIAIWKTV-------TELDI 352

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           S+   + +++        +EL +    L  +P  I     +  L+L  N I+ +P ++  
Sbjct: 353 SSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSDIGF 412

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
           C +L+ L L+ NKI+  P  I  SL  L  L L  N L Q+P                  
Sbjct: 413 CTNLEVLNLTSNKIEQLPTDI-GSLQRLRKLLLGENDLLQIP------------------ 453

Query: 462 IASLPENPPFSSLPHLQELYLR-RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
                  P    L  LQEL++   + L   P  +   + L+IL + +  L  IP+ ++
Sbjct: 454 -------PHIGMLDSLQELFINSNLNLHNLPEHLANCRSLQILSIDKCPLSEIPDEYR 504



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 193/434 (44%), Gaps = 78/434 (17%)

Query: 141 DFKASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           D    NN   S+  ++++ +K +  L V+ NK+  L    I     +    AS+N ++ +
Sbjct: 50  DLSDQNN--HSMSANISELAKTLQNLYVQKNKIHTLPRE-IGCLREMQIFAASENQISSL 106

Query: 200 PETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           PE++ +L+ L RLDL  N++   +P  I    SL E YM +N L+ L + LG L  L  L
Sbjct: 107 PESLANLTSLKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHL 166

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           D   N+L E   E  +L+ L  L L +N L+ +P  I + T+L  L ++ N L++L   +
Sbjct: 167 DFSQNKLTEVPSELGELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKI 226

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
            N                          E+L +           LSL+   L  IP  I 
Sbjct: 227 GNC-------------------------ENLTS-----------LSLKYNRLQVIPDSID 250

Query: 378 EAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPD--------AILTSLSS 428
           +  ++   ++  N I   PP  L  C  +Q L +SRN  KD PD        A   S + 
Sbjct: 251 QCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPDLSKLDNLTAFDGSFNK 310

Query: 429 LSCLK-------------LDNNPLRQVPSDGFKDIPMLQI------LDLSYNIASLPENP 469
           +S L+             L NN ++ +P       P + I      LD+S N+     + 
Sbjct: 311 ISSLRPKVFALPKILKVLLHNNLIKIIP-------PEIAIWKTVTELDISSNLLE-SVSV 362

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              +L  LQEL +   +L   P  I  ++ LR+L+L +N ++ +P      T+L  L+L+
Sbjct: 363 GIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSDIGFCTNLEVLNLT 422

Query: 530 DNNISALPPELVSV 543
            N I  LP ++ S+
Sbjct: 423 SNKIEQLPTDIGSL 436


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D+RNLP L+ L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITAVEKDVRNLPRLSTL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 221/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + + +L RL  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 209/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  ++ +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 AVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITAVEKD-VRNLPRLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 211/466 (45%), Gaps = 41/466 (8%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++++  L+ +P  + ++  L++LD+S N +  IP+ IG    L + +  +N L  LP +
Sbjct: 18  LDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQA 77

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +     L+      N + +LP  +    K++ L +  N+LT +    +     L EL  S
Sbjct: 78  IVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPG-VCMLPSLEELDVS 136

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KN L+  P  +  L +L +L ++ N++  +PS +    +L    +GNN LS  P  + KL
Sbjct: 137 KNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKL 196

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L+++ NQL E     C L  L VL+  NN LS  PP + K+  LR L +  N L 
Sbjct: 197 QKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLT 256

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            + S + +             LP  E                        LS+    LS 
Sbjct: 257 EVPSGVCS-------------LPNLEG-----------------------LSVYNNKLST 280

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            P  + +  ++ +L +  N + E+P  + S  +L+ L +  N I+  PD + T L+ L  
Sbjct: 281 FPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDV-TRLTRLKT 339

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L + N    + P    +   + ++         +P+     +L HL  L +    LR  P
Sbjct: 340 LGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDE--VGNLQHLWFLAVENNLLRTLP 397

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + +  L  LR++ L  N   ++PE    L ++ +L + +NNI+ LP
Sbjct: 398 STMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLP 443



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 216/506 (42%), Gaps = 58/506 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L+N+ L  +P EV+             +  DL+ L L++N +  + E +  L  L  
Sbjct: 17  TLDLTNQGLTSIPEEVF-------------DITDLEALDLSNNKLTSIPEAIGRLQKLYR 63

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L V  N L+ LP AI  L  L  L V  N +  +P  I     L       NQL ++P  
Sbjct: 64  LEVHANMLTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPG 123

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L +   S N +++ P  +    K+ KL +  N+LT + +  + S   L  L   
Sbjct: 124 VCMLPSLEELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSG-VCSLPNLEVLGVG 182

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+  P  +  L +L  L+++ N++  +P  +    +L     GNN LS  P  + KL
Sbjct: 183 NNKLSTFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKL 242

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L ++ NQL E     C L  L  L + NN LS  PP + K+  LR+L +  N L 
Sbjct: 243 QKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLT 302

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LS 370
            + S + + P   +L                                       GMN + 
Sbjct: 303 EVPSGVCSLPNLEVLSV-------------------------------------GMNPIR 325

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P ++     +  L +      E P ++    +LQ L     K    PD +  +L  L 
Sbjct: 326 RLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEV-GNLQHLW 384

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L ++NN LR +PS     +  L+++ L  N   ++PE      LP +++L +R   +  
Sbjct: 385 FLAVENNLLRTLPST-MSHLHNLRVIQLWNNKFDTVPE--VLCELPAMEKLVIRNNNITR 441

Query: 490 APTDILRLQQLRILDLSQNSLQSIPE 515
            PT + R  +LR LD+S N L   P+
Sbjct: 442 LPTVLHRADKLRDLDISGNPLTYPPQ 467



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 178/401 (44%), Gaps = 66/401 (16%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +N  +TS+PE++ D + +  LD+  NKLT                         +PE IG
Sbjct: 21  TNQGLTSIPEEVFDITDLEALDLSNNKLT------------------------SIPEAIG 56

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L +L RL++H N + S+P +I     L   Y+  N L+ LP  + KL KL  L +  NQ
Sbjct: 57  RLQKLYRLEVHANMLTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQ 116

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L +     C L  L  LD+S N LS  PP + K+  LRKL +  N L  + S + + P  
Sbjct: 117 LTKVPPGVCMLPSLEELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPN- 175

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          L V    L +    LS  P  + +  ++ 
Sbjct: 176 -------------------------------LEV----LGVGNNKLSTFPPGVEKLQKLR 200

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +L++  N + E+PP + S  +L+ L    NK+  +P  +   L  L  L + +N L +VP
Sbjct: 201 ELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGV-EKLQKLRDLYIYDNQLTEVP 259

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           S G   +P L+ L +  N +++ P  P    L  L+ELY+   QL E P+ +  L  L +
Sbjct: 260 S-GVCSLPNLEGLSVYNNKLSTFP--PGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEV 316

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L +  N ++ +P+    LT L  L + +      P +++ +
Sbjct: 317 LSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQL 357



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 156/351 (44%), Gaps = 47/351 (13%)

Query: 196 LNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           LN  P+T+ G L+    LDL    + SIP  +     L    + NN L+++P  +G+L K
Sbjct: 5   LNLQPQTVDGRLT----LDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQK 60

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L++H+N L         L +L+ L +  N L+ LPP I K+  L  L +  N L  +
Sbjct: 61  LYRLEVHANMLTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKV 120

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +               LP  E+ + S  K                       LS  P
Sbjct: 121 PPGVC-------------MLPSLEELDVSKNK-----------------------LSTFP 144

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             + +  ++ KL +  N + E+P  + S  +L+ L +  NK+  +P  +   L  L  L 
Sbjct: 145 PGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGV-EKLQKLRELN 203

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           +  N L +VP  G   +P L++L+   N +++ P  P    L  L++LY+   QL E P+
Sbjct: 204 IYGNQLTEVPP-GVCSLPNLEVLNFGNNKLSTFP--PGVEKLQKLRDLYIYDNQLTEVPS 260

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +  L  L  L +  N L + P G + L  L EL + +N ++ +P  + S+
Sbjct: 261 GVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVCSL 311



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 54/361 (14%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL +  N + ++   + +LP L VL V +NKLS  P  + +L  L+ L++  N + ++
Sbjct: 153 LRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELNIYGNQLTEV 212

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  + S   L   +  +N+L   P  + +   L D    +N +T +P  +     +  L 
Sbjct: 213 PPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLS 272

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL+      +     L EL    N L  +P  + SL  L  L +  N I  +P  +
Sbjct: 273 VYNNKLSTFPPG-VEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDV 331

Query: 227 SGC----------CSLAEF-------------YMG-----------------------NN 240
           +            C   EF             Y G                       NN
Sbjct: 332 TRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENN 391

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP+ +  L  L  + L +N+        C+L  +  L + NN+++ LP  + +   
Sbjct: 392 LLRTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPTVLHRADK 451

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           LR L ++GNPL      +    T A++ +L+      +++E ++ + D++  A    +  
Sbjct: 452 LRDLDISGNPLTYPPQDVCKQGTGAIMAFLK------QEAEKASRQPDIMEPAAETELER 505

Query: 360 K 360
           K
Sbjct: 506 K 506


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+              E   L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEIK-------------ECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  IP  I   T L + D   N+L +LPS +
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL ++ I     L +L  S 
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQLNDLTVSH 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P ++G L +L  L + +N I  +  ++  C +L+E Y+  N L+ +P  LG L 
Sbjct: 254 NCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C + LSVL L +N L  LP EIG++  LR L +  N L 
Sbjct: 314 ALRTLNLDKNQLKEIPSTIGGC-ISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 FL 374



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 186/419 (44%), Gaps = 66/419 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            DC  N +K+L   L RC  L     S N I  +P D+A+   + +L+++GN ++ L   
Sbjct: 44  LDC--NHIKDLEKPLFRCRKLKTLSLSENEIIRVPTDIANLICLEELNLKGNDVSDL--- 98

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                PE I   ++L  LDL  N I  +P +I+   S+    + 
Sbjct: 99  ---------------------PEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           + +L+ +P ++G L  L +L++  N L+       QL +L  LDL +N L  LP EIG +
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLL 197

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           + L++L +  N L  L  S+V   +   L    ++L             D I    +L+ 
Sbjct: 198 SNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKL---------MVLPDDIGDLEQLN- 247

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
              +L++    L  +P+ +    ++  L + RN+I +L P + SC +L  L L+ N + +
Sbjct: 248 ---DLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTE 304

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P + L +L +L  L LD N L+++PS                                L
Sbjct: 305 VPTS-LGNLKALRTLNLDKNQLKEIPST-------------------------IGGCISL 338

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
             L LR   L + P +I RL+ LR+LD+  N L  +P     L +L  L LS++   A+
Sbjct: 339 SVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 170/382 (44%), Gaps = 42/382 (10%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+
Sbjct: 14  QIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEII 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +P+ I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ 
Sbjct: 74  RVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTH 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+                      
Sbjct: 134 LGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ-------------------- 173

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                    +T   RL +   E       L  +PSEI     + +L + +N ++ LP  +
Sbjct: 174 ---------LTQLQRLDLGHNE-------LDDLPSEIGLLSNLQELYVDQNDLEALPESI 217

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             C SLQ L +S NK+   PD I   L  L+ L + +N L+ +P+     +  L IL + 
Sbjct: 218 VQCRSLQQLDVSENKLMVLPDDI-GDLEQLNDLTVSHNCLQVLPT-SVGHLKKLAILKVD 275

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N I  L   P   S   L ELYL    L E PT +  L+ LR L+L +N L+ IP    
Sbjct: 276 RNAITQL--TPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIG 333

Query: 519 NLTSLTELDLSDNNISALPPEL 540
              SL+ L L DN +  LP E+
Sbjct: 334 GCISLSVLSLRDNLLEQLPLEI 355



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 140/333 (42%), Gaps = 64/333 (19%)

Query: 212 LDLHQNRILSIPSSIS-GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           LD  Q  + S+P+ I     +L E Y+  N +  L   L +  KL TL L  N++     
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +   L  L  L+L  N +S LP EI + T L+ L L+ NP+                   
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPI------------------- 118

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            +RLP              IT+ T ++     L L  ++L+ +P +I     +  L++  
Sbjct: 119 -TRLPPT------------ITLLTSMT----HLGLNDISLTQMPLDIGHLRNLRSLEVRE 161

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N ++ +PP +S    LQ L L  N++ D P  I   LS+L  L +D N L  +P +    
Sbjct: 162 NLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI-GLLSNLQELYVDQNDLEALP-ESIVQ 219

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              LQ LD+S N                        +L   P DI  L+QL  L +S N 
Sbjct: 220 CRSLQQLDVSEN------------------------KLMVLPDDIGDLEQLNDLTVSHNC 255

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           LQ +P    +L  L  L +  N I+ L P + S
Sbjct: 256 LQVLPTSVGHLKKLAILKVDRNAITQLTPAVGS 288



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L +  N I +L   + +   L+ L ++ N L+E+P ++G L  L++L++  N + +IP  
Sbjct: 272 LKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPST 331

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           IG   +L       N L++LP  +GR  NL      NN +  LP
Sbjct: 332 IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLP 375



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N + ++   L NL  L  LN+  N+L E+P+ IG    L  L +  N + ++
Sbjct: 292 LSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQL 351

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           P EIG    L   D  +N+L  LP ++    NL
Sbjct: 352 PLEIGRLENLRVLDVCNNRLNFLPFTINVLFNL 384


>gi|198451552|ref|XP_002137316.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198131539|gb|EDY67874.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 655

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 152/577 (26%), Positives = 254/577 (44%), Gaps = 82/577 (14%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN+ L  VP  +Y + +EA               + D WW  V L  L 
Sbjct: 74  KLARKSGTLNLSNKGLASVPERLY-DINEADAESKAATLEQLSIKDEDAWWNQVPLTNLD 132

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVS NKLS+LP  + 
Sbjct: 133 LSSNALSHISPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNVSRNKLSDLPRELY 192

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N   ++  +I     L   D   N +K LP  +G  + L+      N 
Sbjct: 193 SLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNH 252

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + +LD+  N LT L                        PE +G L +
Sbjct: 253 IKDLPPDLVNMRSLQRLDLMQNDLTCL------------------------PEDMGLLRK 288

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKE 267
           L  L +  N I+ + S   G  +L E +  NN +S +P  + + L  L  LDL  N++ +
Sbjct: 289 LQFLYIQHNDIMEL-SDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDNKITQ 347

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E      L+ LD+SNNS+  LP  +  +  L  L + GNP++++R  ++   T  +L
Sbjct: 348 LPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRIL 407

Query: 327 KYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           + L+ R + +++D   S +         RL          G + +A   + ++      L
Sbjct: 408 RTLQERSMVKSKDEVESDSG-----AGARLCGGQA-----GNDTAANYPDRYKLRHTRTL 457

Query: 386 DLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            ++   I ++P E+   A    +  +  +RN+++  PD +    + ++ L L +N + QV
Sbjct: 458 AVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLAHNRIGQV 517

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           P    +   +  +   +  +  LP+   F  L  L+EL +   +    P+ +  LQ L I
Sbjct: 518 PQFISQFTRITLLNLSNNLLTDLPKE--FGVLNTLRELNIANNRFSFLPSGLYDLQGLEI 575

Query: 503 LDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPP 538
           L  S N +  +   G + +  L+ LDL +N+I  +PP
Sbjct: 576 LIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPP 612



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 55/324 (16%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L VL++  NK+++LP  +  L  L  LDVS NSI  +P  + +   L+      N 
Sbjct: 331 NLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNP 390

Query: 126 LK----------------------------ELPSSLGRCLNLSDFKASNNC--------- 148
           +K                            E+ S  G    L   +A N+          
Sbjct: 391 IKSIRRDILQCGTSRILRTLQERSMVKSKDEVESDSGAGARLCGGQAGNDTAANYPDRYK 450

Query: 149 -------------ITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                        IT +PE+   LA    +  +D   N+L  + + L     ++TEL+ +
Sbjct: 451 LRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLA 510

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ I   +R+  L+L  N +  +P       +L E  + NN  S LP+ L  L
Sbjct: 511 HNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTLRELNIANNRFSFLPSGLYDL 570

Query: 253 SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L    N + E  V   Q   RLS LDL NN +  +PP +G +T +  L L GNP 
Sbjct: 571 QGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGNPF 630

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R  R  ++   T +++ YLR R+P
Sbjct: 631 RQPRHQILMKGTESIMSYLRDRVP 654



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +T LDLS N++  + P++ +  SL  LIL  N +   P A +  L  L  L +  
Sbjct: 123 WNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALP-AEIGKLEKLMRLNVSR 181

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P + +  +P L+ L++SYN                        +  E   DI  
Sbjct: 182 NKLSDLPRELYS-LPELRHLNISYN------------------------EFSELNPDISD 216

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   NS++S+P G   L  LT L L  N+I  LPP+LV++
Sbjct: 217 LHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLVNM 263


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 171/352 (48%), Gaps = 15/352 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S    + LP  I +L  L+ L +  N +  +P EIG    L + + SSNQL  LP 
Sbjct: 54  ILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPK 113

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP ++     +  L +  N+LT L          L EL  
Sbjct: 114 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE-SGKLGNLQELNL 172

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GK
Sbjct: 173 SDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGK 232

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL    +E  +L+ L  L+LS+N L+ LP EIGK+  L  L L+GN L
Sbjct: 233 LQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 292

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         P  +  L++    N  S   TT    I     L      LSL    L 
Sbjct: 293 TTL---------PIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQT----LSLSYNRLV 339

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P EI +   + +L+L  N +  LP E+    +LQTL L +N++  +P  I
Sbjct: 340 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 391



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 186/407 (45%), Gaps = 43/407 (10%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 41  DLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 99

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y+ +N L+ LP 
Sbjct: 100 ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 159

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E GKL  L  L+L  NQL     E  QL+ L  L+L +N L+ L  EI ++  L+ L L+
Sbjct: 160 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 219

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  +  L++                              L+L  
Sbjct: 220 DNQLTTL---------PIEIGKLQNL---------------------------HTLNLSD 243

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +  E+ +   +  L+LS N +  LP E+    +L TL LS N++   P  I   L
Sbjct: 244 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI-GKL 302

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   
Sbjct: 303 QNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNN 359

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           QL   P +I +LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 360 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 406



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 101 LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 160

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 161 SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 220

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 221 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 279

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 280 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 339

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 340 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 399

Query: 303 LLLTGN 308
           L L G+
Sbjct: 400 LYLGGH 405



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 42  LTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 101

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 102 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 159

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 160 ES--GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 217

Query: 528 LSDNNISALPPEL 540
           LSDN ++ LP E+
Sbjct: 218 LSDNQLTTLPIEI 230



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + +L+LS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 50  LNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 98

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 99  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 133

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 134 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLGNLQELNLSDNQLTTLPQE-IGQLQNLQ 191

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 192 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 249

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L +L  L+LSDN ++ LP E+
Sbjct: 250 LIEVGKLQNLHTLNLSDNQLTTLPIEI 276



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 261 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 307

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 308 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 367

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 368 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 405


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+              E   L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEIK-------------ECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  IP  I   T L + D   N+L +LPS +
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL ++ I     L +L  S 
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQLNDLTVSH 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P ++G L +L  L + +N I  +  ++  C +L+E Y+  N L+ +P  LG L 
Sbjct: 254 NCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C + LSVL L +N L  LP EIG++  LR L +  N L 
Sbjct: 314 ALRTLNLDKNQLKEIPSTIGGC-ISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 FL 374



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 186/419 (44%), Gaps = 66/419 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            DC  N +K+L   L RC  L     S N I  +P D+A+   + +L+++GN ++ L   
Sbjct: 44  LDC--NHIKDLEKPLFRCRKLKTLSLSENEIIRVPTDIANLICLEELNLKGNDVSDL--- 98

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                PE I   ++L  LDL  N I  +P +I+   S+    + 
Sbjct: 99  ---------------------PEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           + +L+ +P ++G L  L +L++  N L+       QL +L  LDL +N L  LP EIG +
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLL 197

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           + L++L +  N L  L  S+V   +   L    ++L             D I    +L+ 
Sbjct: 198 SNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKL---------MVLPDDIGDLEQLN- 247

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
              +L++    L  +P+ +    ++  L + RN+I +L P + SC +L  L L+ N + +
Sbjct: 248 ---DLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTE 304

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P + L +L +L  L LD N L+++PS                                L
Sbjct: 305 VPTS-LGNLKALRTLNLDKNQLKEIPST-------------------------IGGCISL 338

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
             L LR   L + P +I RL+ LR+LD+  N L  +P     L +L  L LS++   A+
Sbjct: 339 SVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 168/378 (44%), Gaps = 42/378 (11%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+ +P+
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ L L+
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           + SL+ +P +IG +  LR L +  N LRT+  S+                          
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ------------------------ 173

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                +T   RL +   E       L  +PSEI     + +L + +N ++ LP  +  C 
Sbjct: 174 -----LTQLQRLDLGHNE-------LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCR 221

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           SLQ L +S NK+   PD I   L  L+ L + +N L+ +P+     +  L IL +  N I
Sbjct: 222 SLQQLDVSENKLMVLPDDI-GDLEQLNDLTVSHNCLQVLPT-SVGHLKKLAILKVDRNAI 279

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
             L   P   S   L ELYL    L E PT +  L+ LR L+L +N L+ IP       S
Sbjct: 280 TQL--TPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCIS 337

Query: 523 LTELDLSDNNISALPPEL 540
           L+ L L DN +  LP E+
Sbjct: 338 LSVLSLRDNLLEQLPLEI 355



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 140/333 (42%), Gaps = 64/333 (19%)

Query: 212 LDLHQNRILSIPSSIS-GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           LD  Q  + S+P+ I     +L E Y+  N +  L   L +  KL TL L  N++     
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +   L  L  L+L  N +S LP EI + T L+ L L+ NP+                   
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPI------------------- 118

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            +RLP              IT+ T ++     L L  ++L+ +P +I     +  L++  
Sbjct: 119 -TRLPPT------------ITLLTSMT----HLGLNDISLTQMPLDIGHLRNLRSLEVRE 161

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N ++ +PP +S    LQ L L  N++ D P  I   LS+L  L +D N L  +P +    
Sbjct: 162 NLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI-GLLSNLQELYVDQNDLEALP-ESIVQ 219

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              LQ LD+S N                        +L   P DI  L+QL  L +S N 
Sbjct: 220 CRSLQQLDVSEN------------------------KLMVLPDDIGDLEQLNDLTVSHNC 255

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           LQ +P    +L  L  L +  N I+ L P + S
Sbjct: 256 LQVLPTSVGHLKKLAILKVDRNAITQLTPAVGS 288



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L +  N I +L   + +   L+ L ++ N L+E+P ++G L  L++L++  N + +IP  
Sbjct: 272 LKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPST 331

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           IG   +L       N L++LP  +GR  NL      NN +  LP
Sbjct: 332 IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLP 375



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N + ++   L NL  L  LN+  N+L E+P+ IG    L  L +  N + ++
Sbjct: 292 LSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQL 351

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           P EIG    L   D  +N+L  LP ++    NL
Sbjct: 352 PLEIGRLENLRVLDVCNNRLNFLPFTINVLFNL 384


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 203/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 207 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +PD+IG+   L   D   N+L ++P S+
Sbjct: 254 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N + S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 314 GNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSR 373

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 374 NQFTSYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVG 432

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 433 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 492

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 493 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 516

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I     +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 517 TMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 576

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 577 KYLNIDKCPLGTIPPE 592



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 221/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  +P+ +     L +    SN++ +LP+ +G  +NL +   + N +TSL
Sbjct: 135 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 194

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L  C+++  LD+  NKL  + + +I     LT L    N +  + + +  L  L  L
Sbjct: 195 PESLKHCTQLKVLDLRHNKLAEIPS-VIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 254 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L L  N L+ +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 314 GNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGI----TQLPDGMLASLSALTTI 369

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 370 TLSRNQFTSYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 422

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 423 MLTALPLDVGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 480

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 481 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENN 538

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 539 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 571



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 23/417 (5%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT LP  + +C  +++L +  NK+  L    I    
Sbjct: 121 QDVIKALQRCRDEGIKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTE-IGCLV 179

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +PE++   ++L  LDL  N++  IPS I    SL   Y+  N ++A
Sbjct: 180 NLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITA 239

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +  +L +L  L  L L  N++KE       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 240 VADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSAL 299

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N  +   L    +RL             + + ++ +   +  E +
Sbjct: 300 DLQHNELLDIPDSIGNLKSLVRLGLRYNRL-------------NSVPISLKNCKSMDEFN 346

Query: 364 LEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDA 421
           +EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I   P  
Sbjct: 347 VEGNGITQLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYG 406

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L +L+ L
Sbjct: 407 IFSRAKGLTKLNMKENMLTALPLDVGTWVNMVE-LNLATNALQKLPDD--IMNLQNLEIL 463

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L    L++ P  I  L++LRILDL +N ++ +P     L  L  L L  N I+ LP
Sbjct: 464 ILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLP 520


>gi|443692532|gb|ELT94125.1| hypothetical protein CAPTEDRAFT_139593, partial [Capitella teleta]
          Length = 549

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 247/558 (44%), Gaps = 89/558 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN S  S++++P E+Y+N +  G                                   +L
Sbjct: 47  LNWSTTSVKNLPKEIYQNEEIQG--------------------------------FARIL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
              +N+L ++P A+  L  L+++D+  N+I K+P  I    AL   D SSN L+ LP+++
Sbjct: 75  EAPNNRLKKVPGAVSALKELENIDLKNNTISKLPGSISRLKALNYLDISSNTLRSLPATI 134

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L++ KA+NN + ++P  L     +  +D+  N +  L  N+   + +   L  S 
Sbjct: 135 HKASGLTEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKNI---YKLPLTLNVSH 191

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P        +  +D+  N++  +P+ I     L    + +N L+ LP +LG + 
Sbjct: 192 NKLKDLPAVSVKNPCIHSMDVSYNQLEQLPNGIENLLCLTSLDVSHNELTELPPQLGLVK 251

Query: 254 KLGTLDLHSNQLKEYCVEACQL-------------------------RLSVLDLSNNSLS 288
            +  LD+  N+LK    E C L                         +L+ LDLS+N ++
Sbjct: 252 YMTHLDISHNKLKFLNPELCNLQFAMTQLYISHNSLETLPDEFCMFKKLTTLDLSHNEIN 311

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLR--SSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            LPP+   M TL+KL L+ N  R +   S L N     L       LP + D   +    
Sbjct: 312 LLPPKFEDMKTLKKLNLSHNKFRNVSALSGLRNCEDLDLSSNAIDLLPSDIDKMKALVNL 371

Query: 347 DLITMATRL---SV----TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           D+   A +    S+    T K + +   +++ +P  + +   I  +D + N ++ LP ++
Sbjct: 372 DISDNAIKTIPDSIGRIRTLKMIKMANNSVTTLPDTLGDDQIIIYIDATNNGLEALPADM 431

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               +++TL+LS+N++  +             L+L+  P          ++ MLQ LDLS
Sbjct: 432 RKLRNMETLLLSQNQLSAF-------------LQLEEFPA------AIGNLKMLQNLDLS 472

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
            N+     +  F  L +L  L ++   L+  P DI  L++L+ LD S N +    +    
Sbjct: 473 NNLLKKLSDK-FFKLKNLARLIIKNNTLQAFPDDISTLKKLKYLDASNNQITEFTKEMTQ 531

Query: 520 LTSLTELDLSDNNISALP 537
           L+ L  +DLS+N +  LP
Sbjct: 532 LSELEFIDLSENQLQTLP 549



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 194/429 (45%), Gaps = 70/429 (16%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDF----KASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           V+ + S+  +K LP  + +   +  F    +A NN +  +P  ++   ++  +D++ N +
Sbjct: 45  VQLNWSTTSVKNLPKEIYQNEEIQGFARILEAPNNRLKKVPGAVSALKELENIDLKNNTI 104

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           + L                        P +I  L  L  LD+  N + S+P++I     L
Sbjct: 105 SKL------------------------PGSISRLKALNYLDISSNTLRSLPATIHKASGL 140

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 292
            E    NN L  +PA+LG    L ++DL +N +K       +L L+ L++S+N L  LP 
Sbjct: 141 TEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKNIYKLPLT-LNVSHNKLKDLPA 199

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
              K   +  + ++ N L  L + +                            E+L+ + 
Sbjct: 200 VSVKNPCIHSMDVSYNQLEQLPNGI----------------------------ENLLCL- 230

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILS 411
           T L V+  EL+        +P ++     +T LD+S N ++ L PEL +   ++  L +S
Sbjct: 231 TSLDVSHNELT-------ELPPQLGLVKYMTHLDISHNKLKFLNPELCNLQFAMTQLYIS 283

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF 471
            N ++  PD        L+ L L +N +  +P   F+D+  L+ L+LS+N          
Sbjct: 284 HNSLETLPDEFCM-FKKLTTLDLSHNEINLLPP-KFEDMKTLKKLNLSHN--KFRNVSAL 339

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           S L + ++L L    +   P+DI +++ L  LD+S N++++IP+    + +L  + +++N
Sbjct: 340 SGLRNCEDLDLSSNAIDLLPSDIDKMKALVNLDISDNAIKTIPDSIGRIRTLKMIKMANN 399

Query: 532 NISALPPEL 540
           +++ LP  L
Sbjct: 400 SVTTLPDTL 408



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           S+L  L+ + L+   + + P  I RL+ L  LD+S N+L+S+P      + LTE+  ++N
Sbjct: 89  SALKELENIDLKNNTISKLPGSISRLKALNYLDISSNTLRSLPATIHKASGLTEIKAANN 148

Query: 532 NISALP------PELVSV 543
            +  +P      P LVS+
Sbjct: 149 RLKTVPAKLGTAPSLVSI 166


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 162/318 (50%), Gaps = 14/318 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-----------DLQKLILA 53
           +K  +   SL+L+N   + +P E+ +      E + W   +           +LQ L L 
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEIGQ-LQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLG 125

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N +  L +++  L  L VL +++N+L+ LP  I +L  L++L +  N I  IP+ I   
Sbjct: 126 YNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQL 185

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L K     NQ+K +P  +G+  NL +    NN + +LP+++     +  L +  N+LT
Sbjct: 186 QNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLT 245

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L    N L  +P+ IG L  L  L L+ N++ ++P  I    +L 
Sbjct: 246 TLPNE-IEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLK 304

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              + NN L+ LP E+G+L  L +LDL +NQL    +E  QL+ L  LDL NN L+ LP 
Sbjct: 305 SLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPK 364

Query: 293 EIGKMTTLRKLLLTGNPL 310
           EIG++  L++L L  N L
Sbjct: 365 EIGQLKNLQELYLNNNQL 382



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 161/347 (46%), Gaps = 19/347 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQL  LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL       N +T+L +++     +  L +  N+LT L    I     L  L  
Sbjct: 112 EIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKE-IEQLKNLQTLGL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N +  +P  I  L  L +L L  N+I +IP  I    +L E  + NN L  LP E+ +
Sbjct: 171 GNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L SNQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N L
Sbjct: 231 LKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
             L   +        L+ L+S                L T+   +      K L L    
Sbjct: 291 TALPKEI------GQLQNLKS---------LDLRNNQLTTLPIEIGQLQNLKSLDLRNNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           L+ +P EI +   +  LDL  N +  LP E+    +LQ L L+ N++
Sbjct: 336 LTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQL 382



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 154/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQL     E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L L  N L+ L  EIG++  L+ L L  N L TL   +             
Sbjct: 113 IEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEI------------- 159

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  + T        L L    +  IP+ IW+   + KL L  N
Sbjct: 160 ---------------EQLKNLQT--------LGLGNNQIKIIPNGIWQLQNLQKLYLDYN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            I+ +P E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P++  + +
Sbjct: 197 QIKTIPKEIGQLQNLQELNLWNNQLKTLPKEI-EQLKNLQTLHLGSNQLTTLPNE-IEQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDL YN + +LP+      L +LQEL L   QL   P +I +LQ L+ LDL  N 
Sbjct: 255 KNLQTLDLYYNQLTTLPQ--EIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P     L +L  LDL +N ++ LP E+
Sbjct: 313 LTTLPIEIGQLQNLKSLDLRNNQLTTLPIEI 343



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 171/401 (42%), Gaps = 69/401 (17%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ I  L  L  L L  N++ ++   I    +L   ++ NN L+ LP E+ +L  
Sbjct: 105 QLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L +NQ+K       QL+ L  L L  N +  +P EIG++  L++L L  N L+TL
Sbjct: 165 LQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +                            E L  + T        L L    L+ +P
Sbjct: 225 PKEI----------------------------EQLKNLQT--------LHLGSNQLTTLP 248

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   +  LDL  N +  LP E+    +LQ L L  N++   P  I   L +L  L 
Sbjct: 249 NEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEI-GQLQNLKSLD 307

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P +                            L +L+ L LR  QL   P +
Sbjct: 308 LRNNQLTTLPIE-------------------------IGQLQNLKSLDLRNNQLTTLPIE 342

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           I +LQ L+ LDL  N L  +P+    L +L EL L++N +S
Sbjct: 343 IGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQLS 383



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 133/286 (46%), Gaps = 42/286 (14%)

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L+L S +L     E  QL+ L  LDL+NN    LP EIG++  L++L L  N L TL  
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +                            E L  + T        L L    L+ +  E
Sbjct: 112 EI----------------------------EQLKNLQT--------LGLGYNQLTTLSQE 135

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   +  L L+ N +  LP E+    +LQTL L  N+IK  P+ I   L +L  L LD
Sbjct: 136 IGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIW-QLQNLQKLYLD 194

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            N ++ +P +    +  LQ L+L  N + +LP+      L +LQ L+L   QL   P +I
Sbjct: 195 YNQIKTIPKE-IGQLQNLQELNLWNNQLKTLPK--EIEQLKNLQTLHLGSNQLTTLPNEI 251

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +L+ L+ LDL  N L ++P+    L +L EL L  N ++ALP E+
Sbjct: 252 EQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEI 297



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 24/214 (11%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAI---------------LTSLS-------SLSCLKLDNNPLRQVPSDG 446
            L  N++   P  I               LT+LS       +L  L L+NN L  +P + 
Sbjct: 100 NLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKE- 158

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            + +  LQ L L  N   +  N  +  L +LQ+LYL   Q++  P +I +LQ L+ L+L 
Sbjct: 159 IEQLKNLQTLGLGNNQIKIIPNGIW-QLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLW 217

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L+++P+  + L +L  L L  N ++ LP E+
Sbjct: 218 NNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEI 251


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 188/407 (46%), Gaps = 45/407 (11%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +      A+D++ L L  N +  L +++  L  L  LN+ +N+ + LP 
Sbjct: 24  NKVYRDFNEALKN-----AMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF-----------------------DCS 122
            IG L  L+SL +  N +  +P EIG    L +                        D  
Sbjct: 79  EIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLI 138

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L+ LP  +G+  NL      +N +T+LP+++     +  L + GN+LT+L    I +
Sbjct: 139 YNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKE-IGT 197

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L  S   L   P+ IG+L  L  L L  NR+ + P  I    +L E Y+ +  L
Sbjct: 198 LQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQL 255

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L KL  L L S QL     E  QL+ L +LDLS+N  +  P EIGK+  L 
Sbjct: 256 TTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLE 315

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L TL   +       LL    +RL        +T  E+++ +    ++  + 
Sbjct: 316 YLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRL--------TTLSEEIVGLQNLKNLNLRN 367

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
                  L+ +P EI +   +  LDLS N     P E+     LQ L
Sbjct: 368 NR-----LTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQIL 409



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 165/379 (43%), Gaps = 67/379 (17%)

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           K D E NK+    N  + +   +  L    N L  +P+ IG L +L  L+L  N+  ++P
Sbjct: 18  KRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             I    +L    + +N L  LP E+G+L  L  L L +N L     E   L+ L  LDL
Sbjct: 78  QEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDL 137

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             N L  LP EIG++  L++L L  N L TL         P  +  L             
Sbjct: 138 IYNRLESLPKEIGQLQNLKRLYLVDNHLTTL---------PQEIWQL------------- 175

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL-DLSRNSIQELPPELSS 401
              E+L T           LS+ G  L+ +P EI   G + KL DL+ + +   P E+ +
Sbjct: 176 ---ENLQT-----------LSISGNQLTILPKEI---GTLQKLEDLNLSGLAVFPQEIGT 218

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L+ L LS N++  +P  I T L +L  L L +  L   P    K+I  LQ       
Sbjct: 219 LQNLKGLYLSNNRLTTFPQEIGT-LQNLKELYLSSTQLTTFP----KEIGQLQ------- 266

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
                          L+ELYL   QL     +I +LQ L++LDLS N   + P+    L 
Sbjct: 267 --------------KLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLR 312

Query: 522 SLTELDLSDNNISALPPEL 540
            L  L L  N ++ LP E+
Sbjct: 313 KLEYLFLEHNRLTTLPKEI 331



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 9/264 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+  +LQ L ++ N +  L +++  L  L  LN+S   L+  P  IG L  LK L +S N
Sbjct: 173 WQLENLQTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNN 230

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +   P EIG+   L +   SS QL   P  +G+   L +    +  + +L +++     
Sbjct: 231 RLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQN 290

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  N+ T      I     L  L    N L  +P+ IG+L RL  L+L+ NR+ +
Sbjct: 291 LKLLDLSDNQFTTFPKE-IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTT 349

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +   I G  +L    + NN L+ LP E+G+L  L  LDL  N    +  E   L+ L +L
Sbjct: 350 LSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQIL 409

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLL 304
            L N     +P  + K  T+RKLL
Sbjct: 410 RLEN-----IPALLSKKETIRKLL 428



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 27/288 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N +E L +++  L  L  L +  N L+ LP  I +L  L++L +S N +  
Sbjct: 131 NLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTI 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L   + S   L   P  +G   NL     SNN +T+ P+++     + +L
Sbjct: 191 LPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKEL 248

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +   +LT      I     L EL      L  + + IG L  L  LDL  N+  + P  
Sbjct: 249 YLSSTQLTTFPKE-IGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKE 307

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCV------------ 270
           I     L   ++ +N L+ LP E+G L +L  L+L++N+L    E  V            
Sbjct: 308 IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQNLKNLNLRN 367

Query: 271 --------EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
                   E  QL+ L  LDLS N  +  P EI  +  L+ L L   P
Sbjct: 368 NRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLENIP 415


>gi|327403778|ref|YP_004344616.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319286|gb|AEA43778.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 540

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 234/499 (46%), Gaps = 43/499 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +E  +L+ L L++NNI+ + + ++ LP++  L++S NK+  LP +   L  LK L +S N
Sbjct: 60  FEMKNLRSLNLSNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKN 119

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +   IG+   LV  + S N+L  LP  +G    L     +NN ++SLP+   +   
Sbjct: 120 DLSSLSGLIGTLNQLVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKD 179

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           + ++ +  N+++ +S     SW  L +L    A  N L  +P  I  L  L  L L  N+
Sbjct: 180 LEEIFIAHNRISKVS----KSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQ 235

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           ++ +P S     +L+  Y+ +N+L  LP    KL  + +L++  N++        ++R L
Sbjct: 236 LVCLPKSFGQLENLSGIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNL 295

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             +  SNN LS LP  I KM TL  + L  N   T   SL+   +  +L   ++ L    
Sbjct: 296 RQIYASNNLLSTLPDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVP 355

Query: 338 DSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           +   S T   DL      +S   KE+ L     ++I S +  A E+ +LDLS   +Q LP
Sbjct: 356 ELHLSMTNLADLYLDQFPISEAIKEIKL----YTSIDSALKYANEVYRLDLSYQKLQRLP 411

Query: 397 PELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
               S + L+ L L+ N++ + P++   L  L SLS           + ++G + I    
Sbjct: 412 ESFGSLSELRWLNLNYNRLSELPESFKDLNKLKSLS-----------IVANGLETI---- 456

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
                        +     L  L+EL L   +L   P  I++L  L   +L QN ++ +P
Sbjct: 457 -------------DSAICYLDALEELQLNGNKLSFVPDCIVQLNNLETFNLQQNYIEQLP 503

Query: 515 EGFKNLTSLTELDLSDNNI 533
           + F  L +L  L L  NN+
Sbjct: 504 DSFFELKNLKTLILYGNNL 522



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 201/461 (43%), Gaps = 57/461 (12%)

Query: 13  SLNLSNRSLRDVPNEV-----YKNFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKE 62
           SLNLSN +++ +P+ +      +  D +G       + +W    L++L L+ N++  L  
Sbjct: 67  SLNLSNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSG 126

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L  L +S N+L+ LP  IG L  LK +D++ N++  +P   G    L +   +
Sbjct: 127 LIGTLNQLVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIA 186

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N++ ++  S  R   L    A NN +  LP  +     +S L ++ N+L  L  +    
Sbjct: 187 HNRISKVSKSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSF-GQ 245

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L+ +    N L  +PE+   L  +  L++ +NRI  + SS+S   +L + Y  NN L
Sbjct: 246 LENLSGIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLL 305

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           S LP  + K+  L  + L  NQ   +     + + + VLDL  N L  +P     MT L 
Sbjct: 306 STLPDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHLSMTNLA 365

Query: 302 KLLLTGNPL-RTLRSSLVNGPTPALLKYLR------------SRLPE------------- 335
            L L   P+   ++   +     + LKY               RLPE             
Sbjct: 366 DLYLDQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNL 425

Query: 336 --NEDSEASTTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIW 377
             N  SE   + +DL  + + LS+ +                +EL L G  LS +P  I 
Sbjct: 426 NYNRLSELPESFKDLNKLKS-LSIVANGLETIDSAICYLDALEELQLNGNKLSFVPDCIV 484

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           +   +   +L +N I++LP       +L+TLIL  N +K +
Sbjct: 485 QLNNLETFNLQQNYIEQLPDSFFELKNLKTLILYGNNLKHY 525



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 173/425 (40%), Gaps = 80/425 (18%)

Query: 189 LIASKNLLNG--------MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           L AS N LN         + E + +  ++  L L  + +   PSSI    +L    + NN
Sbjct: 14  LYASSNTLNAQIKKIYYSLEEALKNKDQVYHLSLKGHVLNEFPSSIFEMKNLRSLNLSNN 73

Query: 241 ALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEACQL-----------R 276
            +  +P  +  L  +  LDL  N+             LKE  +    L           +
Sbjct: 74  NIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGTLNQ 133

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLR---- 330
           L  L+LS N L+ LP EIG +T L+K+ LT N L +L  S   +       + + R    
Sbjct: 134 LVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRISKV 193

Query: 331 ----SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                RL + +  +A   +   +            L L+   L  +P    +   ++ + 
Sbjct: 194 SKSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSFGQLENLSGIY 253

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKI-----------------------KDWPDAIL 423
           L  NS++ LP   +    + +L +S N+I                          PD+I 
Sbjct: 254 LQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTLPDSI- 312

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             + +L  +KLD+N     P    K   ++ +LDL  N +  +PE     S+ +L +LYL
Sbjct: 313 EKMKTLMIVKLDHNQFSTFPESLLKSKSII-VLDLQQNGLKHVPE--LHLSMTNLADLYL 369

Query: 483 RRMQLREAPTDI---------LRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            +  + EA  +I         L+   ++  LDLS   LQ +PE F +L+ L  L+L+ N 
Sbjct: 370 DQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNYNR 429

Query: 533 ISALP 537
           +S LP
Sbjct: 430 LSELP 434


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 214/466 (45%), Gaps = 50/466 (10%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++ K+ +  GS  +   S   +  E   N  E  E  K  E  DL +L +       L +
Sbjct: 167 KLEKSDKRKGSARMPAPSQTKLTLEDLANLTEGAEVCKTMELCDLNRLEMT-----TLPD 221

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L +LN+  NKL+ LP AIG+L  L +L ++ NSI  +P E+G    L   D  
Sbjct: 222 KIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQMLDLR 281

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L  +P  +G  +        +N I+S    +A   K+  LD++ N L  L   L  S
Sbjct: 282 FNKLTAIPPEIGNLV----LDLQHNSISSFA-SVAKLEKLENLDIQYNNLETLPQGL-GS 335

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N +  +P  IG L +L  LDL  NR+  +P+ IS   +L + Y+  N L
Sbjct: 336 LKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISKLKNLHKIYLSRNML 395

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + LP ELG+L  L  L L+ NQL           L VLD+S+N L+ L P I  +T L +
Sbjct: 396 AELPDELGQLKSLEELFLNDNQLTNLGSVVMLPGLRVLDISSNELTKLTPSIAMLTNLHE 455

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L  + N L  L         P + + +  RL +  D+                       
Sbjct: 456 LHASANELTNL--------VPEIGQLVNLRLLDFNDNM---------------------- 485

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
                 L+++P+EI     + KL+L  N ++ELPPE+     L  L+L+ NK+      I
Sbjct: 486 ------LNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQI 539

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
             SL SL+ L LD N L ++P++    +  L++L  + N I  LP+
Sbjct: 540 -GSLLSLTELNLDENKLTELPTE-MGSMKGLEVLTFNDNDINDLPD 583



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 143/274 (52%), Gaps = 3/274 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L + +NN+E L + L +L  L  L++ +N + ELP  IG+L  L+ LD+  N +  +
Sbjct: 316 LENLDIQYNNLETLPQGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGL 375

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L K   S N L ELP  LG+  +L +   ++N +T+L   +     +  LD
Sbjct: 376 PTEISKLKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNLG-SVVMLPGLRVLD 434

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L+ + IA  T L EL AS N L  +   IG L  L  LD + N + S+P+ I
Sbjct: 435 ISSNELTKLTPS-IAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSLPAEI 493

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
               SL +  +G N L  LP E+GKL+ L  L L+ N+L     +    L L+ L+L  N
Sbjct: 494 GNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELNLDEN 553

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+ LP E+G M  L  L    N +  L  +L N
Sbjct: 554 KLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYN 587



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 166/343 (48%), Gaps = 46/343 (13%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L+ L  L+L+ N++ ++P +I    +L    +  N++S LP ELGKL  L  L
Sbjct: 219 LPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQML 278

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           DL  N+L     E   L   VLDL +NS+S     + K+  L  L +  N L TL   L 
Sbjct: 279 DLRFNKLTAIPPEIGNL---VLDLQHNSISSF-ASVAKLEKLENLDIQYNNLETLPQGL- 333

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                +L    R  L  N   E      DL  +        +EL LEG  L+ +P+EI +
Sbjct: 334 ----GSLKSLKRLHLKYNHIKELPREIGDLDKL--------EELDLEGNRLTGLPTEISK 381

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + K+ LSRN + ELP EL    SL+ L L+ N+        LT+L S+  L      
Sbjct: 382 LKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQ--------LTNLGSVVML------ 427

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
                       P L++LD+S N +  L   P  + L +L EL+    +L     +I +L
Sbjct: 428 ------------PGLRVLDISSNELTKL--TPSIAMLTNLHELHASANELTNLVPEIGQL 473

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             LR+LD + N L S+P    NLTSL +L+L  N +  LPPE+
Sbjct: 474 VNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEI 516



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 201/459 (43%), Gaps = 81/459 (17%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD+IG  T L   +   N+L  LP ++G+  NL+    + N I++LP +L     +  L
Sbjct: 219 LPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQML 278

Query: 166 DVEGNKLTV-----------LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           D+  NKLT            L +N I+S+                  ++  L +L  LD+
Sbjct: 279 DLRFNKLTAIPPEIGNLVLDLQHNSISSFA-----------------SVAKLEKLENLDI 321

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N + ++P  +    SL   ++  N +  LP E+G L KL  LDL  N+L     E  +
Sbjct: 322 QYNNLETLPQGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISK 381

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-R 332
           L+ L  + LS N L+ LP E+G++ +L +L L  N L  L S +       +L  LR   
Sbjct: 382 LKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNLGSVV-------MLPGLRVLD 434

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           +  NE ++ + +    I M T L     EL      L+ +  EI +   +  LD + N +
Sbjct: 435 ISSNELTKLTPS----IAMLTNLH----ELHASANELTNLVPEIGQLVNLRLLDFNDNML 486

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             LP E+ +  SL+ L L  N +K+ P  I   L+ LSCL L+ N L  + S        
Sbjct: 487 NSLPAEIGNLTSLKKLNLGGNLLKELPPEI-GKLTGLSCLLLNYNKLTTLTSQ------- 538

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
                               SL  L EL L   +L E PT++  ++ L +L  + N +  
Sbjct: 539 ------------------IGSLLSLTELNLDENKLTELPTEMGSMKGLEVLTFNDNDIND 580

Query: 513 IPEGFKNLTSLTE----------LDLSDNNISALPPELV 541
           +P+   NL +L+             + DN +  +P E+ 
Sbjct: 581 LPDTLYNLDNLSSPLWLFLRIRLFGMDDNPLEDIPQEIT 619



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 12/204 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++ N + KL   +  L  L  L+ S N+L+ L   IG+L  L+ LD + N +  +
Sbjct: 430 LRVLDISSNELTKLTPSIAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSL 489

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+ T+L K +   N LKELP  +G+   LS    + N +T+L   +     +++L+
Sbjct: 490 PAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELN 549

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL---------IRL-DLHQ 216
           ++ NKLT L   +  S   L  L  + N +N +P+T+ +L  L         IRL  +  
Sbjct: 550 LDENKLTELPTEM-GSMKGLEVLTFNDNDINDLPDTLYNLDNLSSPLWLFLRIRLFGMDD 608

Query: 217 NRILSIPSSISGCCSLAEF-YMGN 239
           N +  IP  I+   S A F Y+G+
Sbjct: 609 NPLEDIPQEITEGGSQAVFNYLGD 632



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L    N +  L  ++ NL  L  LN+  N L ELP  IG+L  L  L +++N + 
Sbjct: 474 VNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLT 533

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +  +IGS  +L + +   N+L ELP+ +G    L     ++N I  LP+ L +   +S
Sbjct: 534 TLTSQIGSLLSLTELNLDENKLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYNLDNLS 592



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 37/59 (62%)

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L R+++   P  I  L  L+IL+L  N L ++P     LT+LT L L++N+IS LPPEL
Sbjct: 211 LNRLEMTTLPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPEL 269


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 179/373 (47%), Gaps = 40/373 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T        LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL 
Sbjct: 325 NLQT--------LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 410 LSRNKIKDWPDAI 422
           L +N++  +P  I
Sbjct: 377 LYKNRLMTFPKEI 389



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 177/367 (48%), Gaps = 38/367 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++   
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+L +
Sbjct: 251 IGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L  EI ++  L+ L L+ N L  L         P  +  L++             
Sbjct: 311 NQLTTLSKEIEQLKNLQTLSLSYNRLVIL---------PKEIGQLQNL------------ 349

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL+L    L+A+P EI +   +  L L +N +   P E+    +
Sbjct: 350 ---------------QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394

Query: 405 LQTLILS 411
           LQTL L 
Sbjct: 395 LQTLYLG 401



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 173/381 (45%), Gaps = 45/381 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
           +N L+ LP EIGK+  L  L L+GN L TL   +        L+ L +  L +N+ +   
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLHTLNLSDNQLTTLP 271

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  + T        L+L G  L+ +  EI +   +  L+L  N +  L  E+   
Sbjct: 272 IEIGKLQNLHT--------LNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQL 323

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            +LQTL LS N++   P  I   L +L  L L NN L  +P +    +  LQ L L  N 
Sbjct: 324 KNLQTLSLSYNRLVILPKEI-GQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLSLYKNR 381

Query: 462 IASLPENPPFSSLPHLQELYL 482
           + + P+      L +LQ LYL
Sbjct: 382 LMTFPK--EIGQLKNLQTLYL 400



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S N +T+L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L +L  L+LSDN ++ LP E+
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 528 LSDNNISALPPEL 540
           LSDN ++ LP E+
Sbjct: 216 LSDNQLTTLPIEI 228



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|195399814|ref|XP_002058514.1| GJ14282 [Drosophila virilis]
 gi|194142074|gb|EDW58482.1| GJ14282 [Drosophila virilis]
          Length = 750

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 172/346 (49%), Gaps = 17/346 (4%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVY--KNFDE-----------AGEGDKWWEAVDLQ 48
           D + K AR +G+LN++N+ +  VP  +Y     DE             E D WW  V L+
Sbjct: 54  DNLWKLARKTGTLNMTNKGMSRVPERIYDINEPDEDSKKANLVQLSISEEDAWWNQVPLE 113

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
            L L+ N +  +   + NL  LTVL +  N L  LP  IG+L  L  L++  N + ++P 
Sbjct: 114 NLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNKLSELPI 173

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+ S   L   + S N+  EL   +     L    A NN I SLP  +    +++ L + 
Sbjct: 174 ELFSLPELRHLNISHNEFIELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLLA 233

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N +  L  +++   + L +L   KN L G+PE +G L +L  L +  N I  +P    G
Sbjct: 234 NNHIKELPPDIVYMRS-LQKLDLMKNDLIGLPEDMGLLRKLQCLYIQHNDIKELP-DFEG 291

Query: 229 CCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
             +L E +  NN +  +P +L   L  L  LDL  N++ +   E C LR L+ LD+SNNS
Sbjct: 292 NEALNELHASNNFIERVPKDLCANLPHLKILDLRDNKITQLPDEVCLLRNLNRLDVSNNS 351

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +S LP  +  +  L  L + GNP++T+R  ++   T  +LK L+ R
Sbjct: 352 ISVLPVTLASLAHLISLQVDGNPIKTIRRDILQCGTARILKTLQDR 397



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 2/182 (1%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           +LA   K+  +D   N+L+     L     ++TEL+ + N++  +P  I   +R+  L+L
Sbjct: 568 ELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNL 627

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  +P       +L E  + NN    LP  L +L  L  L    N +K   V   +
Sbjct: 628 SNNVIKDLPPEFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLE 687

Query: 275 L--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
              RL+ LDL NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R
Sbjct: 688 SLPRLNTLDLRNNDIEYVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDR 747

Query: 333 LP 334
           +P
Sbjct: 748 IP 749



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 17/283 (6%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L  L+VL L +N+L  LPPEIGK+  L +L L  N L  L
Sbjct: 112 LENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNKLSEL 171

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              L + P    L++L   +  NE  E +    +L  +        + L     N++++P
Sbjct: 172 PIELFSLPE---LRHLN--ISHNEFIELNPDISNLHML--------EFLDAGNNNINSLP 218

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I     +T L L+ N I+ELPP++    SLQ L L +N +   P+  +  L  L CL 
Sbjct: 219 GGIGFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGLPED-MGLLRKLQCLY 277

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + +N ++++P   F+    L  L  S N          ++LPHL+ L LR  ++ + P +
Sbjct: 278 IQHNDIKELPD--FEGNEALNELHASNNFIERVPKDLCANLPHLKILDLRDNKITQLPDE 335

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           +  L+ L  LD+S NS+  +P    +L  L  L +  N I  +
Sbjct: 336 VCLLRNLNRLDVSNNSISVLPVTLASLAHLISLQVDGNPIKTI 378



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 17/219 (7%)

Query: 331 SRLPE-----NEDSEASTTKEDLITMATRL------SVTSKELSLEGMNLSAIPSEIWEA 379
           SR+PE     NE  E S  K +L+ ++          V  + L L    LS I  +I   
Sbjct: 74  SRVPERIYDINEPDEDSK-KANLVQLSISEEDAWWNQVPLENLDLSSNALSHISPKIENL 132

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +T L L  N++  LPPE+     L  L L  NK+ + P  +  SL  L  L + +N  
Sbjct: 133 LTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNKLSELPIELF-SLPELRHLNISHNEF 191

Query: 440 RQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
            ++  D   ++ ML+ LD  + NI SLP    F  L  L  L L    ++E P DI+ ++
Sbjct: 192 IELNPD-ISNLHMLEFLDAGNNNINSLPGGIGF--LVRLTALLLANNHIKELPPDIVYMR 248

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L+ LDL +N L  +PE    L  L  L +  N+I  LP
Sbjct: 249 SLQKLDLMKNDLIGLPEDMGLLRKLQCLYIQHNDIKELP 287



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)

Query: 359 SKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQT-LILSRNK 414
           ++ L++   NL+ +P+ ++E   A ++  +D +RN +   PP L   ++L T L+L+ N 
Sbjct: 549 TRTLAVNLENLTDVPTHVFELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNV 608

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           I   P   ++  + ++ L L NN ++ +P                         P F  L
Sbjct: 609 IASVP-TFISQFTRITFLNLSNNVIKDLP-------------------------PEFGLL 642

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNI 533
             L+EL +   +    P  +  LQ L IL  S N ++++   G ++L  L  LDL +N+I
Sbjct: 643 NTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDI 702

Query: 534 SALPPEL 540
             +PP L
Sbjct: 703 EYVPPIL 709



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +  LDLS N++  + P++ +  +L  L L  N +   P  I   L  L  L L +
Sbjct: 107 WNQVPLENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEI-GKLEKLVRLNLGH 165

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L ++P + F                         SLP L+ L +   +  E   DI  
Sbjct: 166 NKLSELPIELF-------------------------SLPELRHLNISHNEFIELNPDISN 200

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   N++ S+P G   L  LT L L++N+I  LPP++V +
Sbjct: 201 LHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYM 247



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R+S    EL L    ++++P+ I +   IT L+LS N I++LPPE     +L+ L ++ N
Sbjct: 594 RMSNLVTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANN 653

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
           + +  P   L  L  L  L   +N ++ +   G + +P L  LDL  N I  +P  P   
Sbjct: 654 RFEYLPKG-LYELQGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDIEYVP--PILG 710

Query: 473 SLPHLQELYLRRMQLREAPTDIL 495
           +L ++  L L     R+    IL
Sbjct: 711 NLTNITHLELVGNPFRQPRHQIL 733



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           + V++ + N+LS  P  +  + +++  L ++ N I  +P  I   T +   + S+N +K+
Sbjct: 575 VHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKD 634

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP   G    L +   +NN    LP+ L +   +  L    N +  L+   + S   L  
Sbjct: 635 LPPEFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNT 694

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDL 214
           L    N +  +P  +G+L+ +  L+L
Sbjct: 695 LDLRNNDIEYVPPILGNLTNITHLEL 720



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 7/130 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L+LAHN I  +   +     +T LN+S+N + +LP   G L+ L+ L+++ N    +
Sbjct: 599 VTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYL 658

Query: 107 PDEIGSATALVKFDCSSNQLKELP----SSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           P  +     L     S N +K L      SL R LN  D +  NN I  +P  L + + +
Sbjct: 659 PKGLYELQGLEILVASDNHIKALNVAGLESLPR-LNTLDLR--NNDIEYVPPILGNLTNI 715

Query: 163 SKLDVEGNKL 172
           + L++ GN  
Sbjct: 716 THLELVGNPF 725


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           LS +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 220/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +L +L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNDLL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L+ +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLPKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N+      
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 199/405 (49%), Gaps = 53/405 (13%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            SLNL+ + L ++P E+         G+      DL  L L  N +  L  ++ NL  L V
Sbjct: 748  SLNLAGKQLTELPKEI---------GN----LTDLTWLYLNRNQLATLPPEIGNLINLRV 794

Query: 73   LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPS 131
            L++ +N+L++LP  IG L  L+ L +S N  +K+ P +I + T L + + SSNQLK LP 
Sbjct: 795  LSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPK 854

Query: 132  SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
             +G   NL+    S+N +  LP+++ + + ++ LD+ GN+LT L    I + T L  L  
Sbjct: 855  EIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPE-IGNLTNLEVLYL 913

Query: 192  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            S+N L  +P+ IG+L+ L  LDL +N  + +P+ I    +L   Y+    L+ L  E+G 
Sbjct: 914  SRNQLTALPKEIGNLTNLTELDLSENENV-LPAEIGNLTNLRRLYLNRKQLTVLVPEIGN 972

Query: 252  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ L TL L  NQL     E  +L +L  LD++ N L  LPPEIG +T L +L L  N L
Sbjct: 973  LTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQL 1032

Query: 311  RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              L   + N                             +T  T+L +   +       L 
Sbjct: 1033 TALPKEIGN-----------------------------LTNLTKLHLYKNK-------LM 1056

Query: 371  AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            A+P E+     + +L L  N +  LPPE+ +  +L  L    N++
Sbjct: 1057 ALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQL 1101



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 25/311 (8%)

Query: 47   LQKLILAHN-NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            L+ L L+ N  ++ L + + NL  LT LN+S N+L  LP  IG L  L  L++S N +  
Sbjct: 815  LRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKV 874

Query: 106  IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +P EIG+ T L   D + NQL ELP  +G   NL     S N +T+LP+++ + + +++L
Sbjct: 875  LPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTEL 934

Query: 166  DVEGN----------------------KLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            D+  N                      +LTVL    I + T L  L    N L  +P  I
Sbjct: 935  DLSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPE-IGNLTNLKTLSLKDNQLIALPPEI 993

Query: 204  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            G L++L  LD+++N++  +P  I    +L E Y+ +N L+ALP E+G L+ L  L L+ N
Sbjct: 994  GKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKN 1053

Query: 264  QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            +L     E  +L  L  L L  N L+ LPPEIG +T L +L    N L +    +V   T
Sbjct: 1054 KLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEIVKQGT 1113

Query: 323  PALLKYLRSRL 333
             A+L YLR +L
Sbjct: 1114 QAILAYLREQL 1124



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 208/460 (45%), Gaps = 89/460 (19%)

Query: 84   PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
            P  I +L    SL+++   + ++P EIG+ T L     + NQL  LP  +G  +NL    
Sbjct: 737  PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLS 796

Query: 144  ASNNCITSLPEDLADCSKMSKLDVEGN-KLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN +T LP+++ + S +  L + GN +L VL    I++ T LT+L  S N L  +P+ 
Sbjct: 797  LENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKK-ISNLTNLTQLNLSSNQLKVLPKE 855

Query: 203  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
            IG+L+ L +L+L  N++  +P  I    +L    +  N L+ LP E+G L+ L  L L  
Sbjct: 856  IGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSR 915

Query: 263  NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
            NQL     E   L  L+ LDLS N  + LP EIG +T LR+L L    L  L        
Sbjct: 916  NQLTALPKEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTVL-------- 966

Query: 322  TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                       +PE             I   T L    K LSL+   L A+P EI +  +
Sbjct: 967  -----------VPE-------------IGNLTNL----KTLSLKDNQLIALPPEIGKLTQ 998

Query: 382  ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
            +  LD+++N +++LPPE+ +  +L  L L  N++   P  I  +L++L+ L L  N L  
Sbjct: 999  LKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEI-GNLTNLTKLHLYKNKLMA 1057

Query: 442  VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
            +P                         P    L +L ELY                    
Sbjct: 1058 LP-------------------------PEMGRLTNLIELY-------------------- 1072

Query: 502  ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
               L  N L ++P    NLT+LT+L   +N + +  PE+V
Sbjct: 1073 ---LDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEIV 1109



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 184/393 (46%), Gaps = 62/393 (15%)

Query: 71   TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            T LN++  +L+ELP  IG L  L  L ++ N +  +P EIG+   L      +N+L +LP
Sbjct: 747  TSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLP 806

Query: 131  SSLGRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
              +G   +L     S N  +  LP+ +++ + +++L++  N+L VL    I + T LT+L
Sbjct: 807  KEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKE-IGNLTNLTQL 865

Query: 190  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              S N L  +P+ IG+L+ L  LDL+ N++  +P  I    +L   Y+  N L+ALP E+
Sbjct: 866  NLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEI 925

Query: 250  GKLSKLGTLDLHSNQ------------LKEYCVEACQL-----------RLSVLDLSNNS 286
            G L+ L  LDL  N+            L+   +   QL            L  L L +N 
Sbjct: 926  GNLTNLTELDLSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQ 985

Query: 287  LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            L  LPPEIGK+T L+ L +  N LR L   + N                           
Sbjct: 986  LIALPPEIGKLTQLKWLDINKNQLRQLPPEIGN--------------------------- 1018

Query: 347  DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                  T L+    EL L    L+A+P EI     +TKL L +N +  LPPE+    +L 
Sbjct: 1019 -----LTNLT----ELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLI 1069

Query: 407  TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             L L  N++   P  I  +L++L+ L   NN L
Sbjct: 1070 ELYLDYNQLTALPPEI-GNLTNLTQLSFYNNQL 1101


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 209/465 (44%), Gaps = 64/465 (13%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT L N  I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE-IEQLKNLQVLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ I  L  L  L L  NR+ ++P+ I    +L    +G+N L+ LP E+ +
Sbjct: 170 GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQ 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L LHSN+L     +  QL+ L  LDLSNN L+ LP EI ++  L+ L L+    
Sbjct: 230 LKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLS---- 285

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                                     E+  A+  KE  I     L V    L L    ++
Sbjct: 286 --------------------------ENQFATFPKE--IGQLQNLKV----LFLNNNQIT 313

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P+EI +  ++  L LS N +  LP E+    +L++L LS N++   P  +   L +L 
Sbjct: 314 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEV-GQLENLQ 372

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 373 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTTL 407

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           P +I +LQ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 408 PQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 452



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 203/450 (45%), Gaps = 66/450 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 49  VRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P ++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 109 PNEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 144

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  NR+ ++P+ I    +L    +G+N L+ LP E+ +L  L  L L SN+L     E 
Sbjct: 145 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI 204

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +              
Sbjct: 205 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI-------------- 250

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  +        K L L    L+ +P+EI +   +  L LS N 
Sbjct: 251 --------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQ 288

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
               P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + + 
Sbjct: 289 FATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQLK 346

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N L
Sbjct: 347 NLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQL 404

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++P+    L +L  L L  N ++ LP E+
Sbjct: 405 TTLPQEIGQLQNLLWLSLVYNQLTTLPNEI 434



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P+EI   
Sbjct: 56  RQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 115

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+LP ++     +  LD+  N+LT
Sbjct: 116 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLT 175

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           VL    I     L  L    N L  +P  I  L  L  LDL  N++  +P  I    +L 
Sbjct: 176 VLPQE-IEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQ 234

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L+ L  ++ +L  L +LDL +NQL     E  QL+ L  L LS N  +  P 
Sbjct: 235 LLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPK 294

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EIG++  L+ L L  N +  L + +        L+YL   L +N+          LIT+ 
Sbjct: 295 EIGQLQNLKVLFLNNNQITILPNEIAKLKK---LQYL--YLSDNQ----------LITLP 339

Query: 353 TRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
             +      K L L    L+ +P E+ +   +  LDL  N ++ LP E+    +LQTL L
Sbjct: 340 KEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFL 399

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           S N++   P  I   L +L  L L  N L  +P++  + +  LQ L L+ N  S
Sbjct: 400 SNNQLTTLPQEI-GQLQNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLNNNQFS 451



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 148/308 (48%), Gaps = 13/308 (4%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L  ++  
Sbjct: 102 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 160

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L VL++  N+L+ LP  I +L  L+ L +  N +  +P+EI     L   D  SNQL
Sbjct: 161 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQL 220

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP  + +  NL      +N +T+L +D+     +  LD+  N+LT L N  I     L
Sbjct: 221 TVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNL 279

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L   Y+ +N L  LP
Sbjct: 280 KSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 339

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP EI ++  L+ L L
Sbjct: 340 KEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFL 399

Query: 306 TGNPLRTL 313
           + N L TL
Sbjct: 400 SNNQLTTL 407



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 194 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 252

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 253 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 312

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 313 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL----------- 361

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 362 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 408

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+G+L  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 409 QEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 452



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 129/268 (48%), Gaps = 20/268 (7%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 333
           L + VLDLS   L  LP EIG++  L++L L  N L  L   +       LL YLRS RL
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSNRL 105

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                    TT  + I     L V    L L    L+ +P EI +   +  L L  N + 
Sbjct: 106 ---------TTLPNEIEQLKNLQV----LDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT 152

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP E+    +LQ L L  N++   P  I   L +L  L L +N L  +P++  + +  L
Sbjct: 153 TLPNEIEQLKNLQVLDLGSNQLTVLPQEI-EQLKNLQLLYLRSNRLTTLPNE-IEQLKNL 210

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           Q+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ L+ LDLS N L +
Sbjct: 211 QVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 268

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPEL 540
           +P   + L +L  L LS+N  +  P E+
Sbjct: 269 LPNEIEQLKNLKSLYLSENQFATFPKEI 296



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 258 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 317

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 318 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 377

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T+LP+++     +  L +  N+LT L N
Sbjct: 378 NNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPN 432


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L++ N+  L  ++  L   T L +S+N+L+ LP  I EL  LK LD+S+N +  +P +
Sbjct: 21  LRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPD 80

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I     L + +  +NQL  LP  + +  NL     S N +TSLP  + +   +++L +  
Sbjct: 81  ISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISK 140

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L    I+    L +L  S+N L  +P  I  L  L ++++++N++ S+P  IS  
Sbjct: 141 NQLTSLPPE-ISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHEISEL 199

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL +  +  N L++LP+E+  L  L  LD+  NQL    +E  +L+ L+ LD+S+N L+
Sbjct: 200 KSLTQLSISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLT 259

Query: 289 GLPPEI---------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPE 335
            LPPEI         G  +  + + L GNPL      +V     A++ Y +S    + P 
Sbjct: 260 SLPPEILKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFKSLEGEKKPL 319

Query: 336 NE-------DSEASTT 344
           NE       D EA  T
Sbjct: 320 NEVKVLLVGDGEAGKT 335



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 63/303 (20%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L++LP E+ +L     L +  NQL     E  +L+ L  LD+S N L+ LPP+I K+  L
Sbjct: 28  LTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNL 87

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L +  N L +L       P  + LK L                              K
Sbjct: 88  TQLNIRNNQLTSL------PPGISKLKNL------------------------------K 111

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           +L +    L+++PS I E  ++T+L +S+N +  LPPE+S   +L+ L +SRN++   P 
Sbjct: 112 QLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPP 171

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            IL  L SL+ + +  N L  +P +                          S L  L +L
Sbjct: 172 EIL-ELKSLTQINIYENQLTSLPHE-------------------------ISELKSLTQL 205

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +   QL   P++I  L+ L  LD+S+N L S+P     L +LT+LD+S N +++LPPE+
Sbjct: 206 SISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEI 265

Query: 541 VSV 543
           + +
Sbjct: 266 LKL 268



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 145/311 (46%), Gaps = 51/311 (16%)

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E NK T L     A    +T L  S   L  +P  I  L    +L +  N++ S+P  I
Sbjct: 1   MESNKTTDLIRR--AQRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEI 58

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEAC 273
           S   +L +  +  N L++LP ++ KL  L  L++ +NQ             LK+  +   
Sbjct: 59  SELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISEN 118

Query: 274 QLR-----------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL            L+ L +S N L+ LPPEI K+  L++L ++ N L +L         
Sbjct: 119 QLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSL--------P 170

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 380
           P +L+ L+S       ++ +  +  L ++   +S      +LS+ G  L+++PSEI    
Sbjct: 171 PEILE-LKSL------TQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLE 223

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT--------SLSSLSCL 432
            +T+LD+SRN +  LP E++   +L  L +S NK+   P  IL         + S+   +
Sbjct: 224 SLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEILKLGIDIEWGNNSAEKGI 283

Query: 433 KLDNNPLRQVP 443
            L+ NPL + P
Sbjct: 284 FLEGNPLEKPP 294



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 28/164 (17%)

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +  ++T L LS  ++  LPPE+S   +   L +S N++   P  I    S L  LK    
Sbjct: 14  QRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEI----SELKNLKQ--- 66

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
                             LD+SYN + SLP  P  S L +L +L +R  QL   P  I +
Sbjct: 67  ------------------LDISYNQLTSLP--PDISKLKNLTQLNIRNNQLTSLPPGISK 106

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ L+ LD+S+N L S+P G   L  LT+L +S N +++LPPE+
Sbjct: 107 LKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEI 150


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 179/373 (47%), Gaps = 40/373 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T        LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL 
Sbjct: 325 NLQT--------LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 410 LSRNKIKDWPDAI 422
           L +N++  +P  I
Sbjct: 377 LYKNRLMTFPKEI 389



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 177/367 (48%), Gaps = 38/367 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++   
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+L +
Sbjct: 251 IGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L  EI ++  L+ L L+ N L  L         P  +  L++             
Sbjct: 311 NQLTTLSKEIEQLKNLQTLSLSYNRLVIL---------PKEIGQLQNL------------ 349

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL+L    L+A+P EI +   +  L L +N +   P E+    +
Sbjct: 350 ---------------QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394

Query: 405 LQTLILS 411
           LQTL L 
Sbjct: 395 LQTLYLG 401



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 173/381 (45%), Gaps = 45/381 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
           +N L+ LP EIGK+  L  L L+GN L TL   +        L+ L +  L +N+ +   
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLHTLNLSDNQLTTLP 271

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  + T        L+L G  L+ +  EI +   +  L+L  N +  L  E+   
Sbjct: 272 IEIGKLQNLHT--------LNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQL 323

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            +LQTL LS N++   P  I   L +L  L L NN L  +P +    +  LQ L L  N 
Sbjct: 324 KNLQTLSLSYNRLVILPKEI-GQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLSLYKNR 381

Query: 462 IASLPENPPFSSLPHLQELYL 482
           + + P+      L +LQ LYL
Sbjct: 382 LMTFPK--EIGQLKNLQTLYL 400



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S N +T+L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L +L  L+LSDN ++ LP E+
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           ++ EA T  +  +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP
Sbjct: 30  DEVEAGTYMD--LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +LQ L LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L
Sbjct: 88  KEIGQLKNLQELNLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            LS N + +LP       L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +
Sbjct: 146 YLSSNQLTTLPRES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFK 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
             + L +L  L+LSDN ++ LP E+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEI 228



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           LS +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 220/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +L +L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNDLL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L+ +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLPKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N+      
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|322783661|gb|EFZ10999.1| hypothetical protein SINV_03864 [Solenopsis invicta]
          Length = 621

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 228/505 (45%), Gaps = 59/505 (11%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L +N +EKL  ++ +L  L ++N+S NKL  LP     L  L  L +  N +  +  EIG
Sbjct: 117 LNNNLLEKLPAEIGSLRRLRIINLSDNKLKSLPYEFYTLEELCELYLKNNLLSILEPEIG 176

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L   D S N L ELP  +G  + L      +N I  LP    D + +  LD+  N 
Sbjct: 177 NLIMLTHMDLSYNNLSELPIGMGYMVRLETLNLCHNMIKELP---PDVTTLKTLDISFNH 233

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L ++                           +G L ++ R+    N +   P  ISGC +
Sbjct: 234 LEIIP-------------------------PLGELRKVERIMFQSNNLQEFP-DISGCSA 267

Query: 232 LAEFYMGNNALSAL-----PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           L   ++ NN +        P  L  +  L  L L  N+++    E  +L  L VLDLS+N
Sbjct: 268 LTVLHLDNNNIPVCVNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHN 327

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +++ +P  IG +  L++ ++ GN +  +R  ++   TP +L ++R  +  N    +  T+
Sbjct: 328 NITLIPFCIGILPNLKQFVIEGNNITNVRGDIIRCGTPRILTHIRQIVDNN---TSVITR 384

Query: 346 EDL-------ITMATRLSVTSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQEL 395
           E L       I     +   +K  SL G NL  I  EI E      +T +DLSRN + EL
Sbjct: 385 ELLQPCGGNNIYPDKYVMKHTKLFSLTGQNLVEISEEILEDAANASVTIIDLSRNKLSEL 444

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P ++S+  ++  L L+ N +   P+ I      L  L L  N L+ +PS     +  L+ 
Sbjct: 445 PDKMSTIVTVTDLKLTSNHLASLPEWIGEKYKFLQILDLSTNHLQSLPS-SISCLKYLRD 503

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           +DLS+N  S  E+   + L H +       +  E P  I  ++ L  L ++ N +  I  
Sbjct: 504 IDLSFN--SSIESESITCLKHEE-------KFTELPEAIYDVESLESLIINDNLISKIDV 554

Query: 516 G-FKNLTSLTELDLSDNNISALPPE 539
              + L  L  L+L +NNIS +PPE
Sbjct: 555 PLLEKLKRLAVLNLMNNNISHVPPE 579



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 217/479 (45%), Gaps = 65/479 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS+  L+ +P E Y                +L +L L +N +  L+ ++ NL +LT +
Sbjct: 138 INLSDNKLKSLPYEFYT-------------LEELCELYLKNNLLSILEPEIGNLIMLTHM 184

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N LSELP  +G +  L++L++  N I ++P ++   T L   D S N L+ +P  L
Sbjct: 185 DLSYNNLSELPIGMGYMVRLETLNLCHNMIKELPPDV---TTLKTLDISFNHLEIIP-PL 240

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----IASWTMLTEL 189
           G    +      +N +   P D++ CS ++ L ++ N + V  N +    + +   L +L
Sbjct: 241 GELRKVERIMFQSNNLQEFP-DISGCSALTVLHLDNNNIPVCVNEIDPQRLEAIGHLKKL 299

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +PE I  L  L  LDL  N I  IP  I    +L +F +  N ++ +    
Sbjct: 300 TLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCIGILPNLKQFVIEGNNITNVR--- 356

Query: 250 GKLSKLGTLDL--HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G + + GT  +  H  Q+ +         L    L     + + P+   M   +   LTG
Sbjct: 357 GDIIRCGTPRILTHIRQIVDNNTSVITREL----LQPCGGNNIYPDKYVMKHTKLFSLTG 412

Query: 308 NPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
             L  +   ++     A   ++   R++L E  D            M+T ++VT  +L L
Sbjct: 413 QNLVEISEEILEDAANASVTIIDLSRNKLSELPDK-----------MSTIVTVT--DLKL 459

Query: 365 EGMNLSAIPSEIWEAGEITK-LDLSRNSIQELPPELSSCASLQTLILSRN---------- 413
              +L+++P  I E  +  + LDLS N +Q LP  +S    L+ + LS N          
Sbjct: 460 TSNHLASLPEWIGEKYKFLQILDLSTNHLQSLPSSISCLKYLRDIDLSFNSSIESESITC 519

Query: 414 -----KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLP 466
                K  + P+AI   + SL  L +++N + ++     + +  L +L+L + NI+ +P
Sbjct: 520 LKHEEKFTELPEAIY-DVESLESLIINDNLISKIDVPLLEKLKRLAVLNLMNNNISHVP 577



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 163/332 (49%), Gaps = 40/332 (12%)

Query: 43  EAV-DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           EA+  L+KL L  N IE + E++  L  L VL++SHN ++ +P  IG L  LK   +  N
Sbjct: 291 EAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCIGILPNLKQFVIEGN 350

Query: 102 SIMKIPDEI---GSATALVKF-----DCSSNQLKELPSSLGRCLNLSD---------FKA 144
           +I  +  +I   G+   L        + +S   +EL    G      D         F  
Sbjct: 351 NITNVRGDIIRCGTPRILTHIRQIVDNNTSVITRELLQPCGGNNIYPDKYVMKHTKLFSL 410

Query: 145 SNNCITSLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           +   +  + E++   A  + ++ +D+  NKL+ L + + ++   +T+L  + N L  +PE
Sbjct: 411 TGQNLVEISEEILEDAANASVTIIDLSRNKLSELPDKM-STIVTVTDLKLTSNHLASLPE 469

Query: 202 TIGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNA---------------LSAL 245
            IG   + ++ LDL  N + S+PSSIS    L +  +  N+                + L
Sbjct: 470 WIGEKYKFLQILDLSTNHLQSLPSSISCLKYLRDIDLSFNSSIESESITCLKHEEKFTEL 529

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P  +  +  L +L ++ N + +  V   +   RL+VL+L NN++S +PPE+G +  LR L
Sbjct: 530 PEAIYDVESLESLIINDNLISKIDVPLLEKLKRLAVLNLMNNNISHVPPELGNLKNLRNL 589

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LL+GN  +  R +++   T  +L YLR+ +P+
Sbjct: 590 LLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 621



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 147/323 (45%), Gaps = 67/323 (20%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N+L+ +  ++  L++L TLD+  N L       C  + +   L+NN L  LP EIG +  
Sbjct: 84  NSLTLIDEKVQFLTELSTLDVRINHL------YCDFKSA---LNNNLLEKLPAEIGSLRR 134

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           LR + L+ N L++L            L YL++ L    + E        + M T + ++ 
Sbjct: 135 LRIINLSDNKLKSLPYEFYTLEELCEL-YLKNNLLSILEPEIGN-----LIMLTHMDLSY 188

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-------------- 405
                   NLS +P  +     +  L+L  N I+ELPP++++  +L              
Sbjct: 189 N-------NLSELPIGMGYMVRLETLNLCHNMIKELPPDVTTLKTLDISFNHLEIIPPLG 241

Query: 406 -----QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
                + ++   N ++++PD  ++  S+L+ L LDNN           +IP+        
Sbjct: 242 ELRKVERIMFQSNNLQEFPD--ISGCSALTVLHLDNN-----------NIPV-------- 280

Query: 461 NIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
               + E  P    ++ HL++L L+  ++   P +I++L  L +LDLS N++  IP    
Sbjct: 281 ---CVNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCIG 337

Query: 519 NLTSLTELDLSDNNISALPPELV 541
            L +L +  +  NNI+ +  +++
Sbjct: 338 ILPNLKQFVIEGNNITNVRGDII 360



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLD 435
           WE   +  LDLS NS+  +  ++     L TL +  N +  D+  A            L+
Sbjct: 71  WEQEPLQVLDLSFNSLTLIDEKVQFLTELSTLDVRINHLYCDFKSA------------LN 118

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           NN L ++P++    +  L+I++LS N + SLP    F +L  L ELYL+   L     +I
Sbjct: 119 NNLLEKLPAE-IGSLRRLRIINLSDNKLKSLPYE--FYTLEELCELYLKNNLLSILEPEI 175

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L  L  +DLS N+L  +P G   +  L  L+L  N I  LPP++ ++
Sbjct: 176 GNLIMLTHMDLSYNNLSELPIGMGYMVRLETLNLCHNMIKELPPDVTTL 224


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 188/401 (46%), Gaps = 42/401 (10%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L + +  L  L  L +  N+L  
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L++S N +  +P EIG    L + D   N+L  LP  +G+  NL   
Sbjct: 86  LPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S+N +T+LP +      + +L++  N+LT L                        P+ 
Sbjct: 146 YLSSNQLTTLPRESGKLGNLQELNLSDNQLTTL------------------------PQE 181

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GKL  L TL+L  
Sbjct: 182 IGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD 241

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL    +E  +L+ L  L+LS+N L+ LP EIGK+  L  L L+GN L TL        
Sbjct: 242 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL-------- 293

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++    N  S   TT    I     L      LSL    L  +P EI +   
Sbjct: 294 -PIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQT----LSLSYNRLVILPKEIGQLQN 348

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           + +L+L  N +  LP E+    +LQTL L +N++  +P  I
Sbjct: 349 LQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 185/407 (45%), Gaps = 43/407 (10%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+ +     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y+ +N L+ LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E GKL  L  L+L  NQL     E  QL+ L  L+L +N L+ L  EI ++  L+ L L+
Sbjct: 158 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  +  L++                              L+L  
Sbjct: 218 DNQLTTL---------PIEIGKLQNL---------------------------HTLNLSD 241

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +  E+ +   +  L+LS N +  LP E+    +L TL LS N++   P  I   L
Sbjct: 242 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI-GKL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   
Sbjct: 301 QNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNN 357

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           QL   P +I +LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 123/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP +I K+  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLGNLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L +L  L+LSDN ++ LP E+
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D +   T  DL T A +  +  + L L G N + +P +I +   + KL L  N ++ LP 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPK 88

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +LQ L LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L 
Sbjct: 89  EIGQLKNLQELNLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLY 146

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           LS N + +LP       L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ + 
Sbjct: 147 LSSNQLTTLPRES--GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE 204

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
            + L +L  L+LSDN ++ LP E+
Sbjct: 205 IEQLKNLQTLNLSDNQLTTLPIEI 228



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 139/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D+Q LIL    ++ +  ++  L  L  L+++ N+L+ LP  IG+LH L+ LD+ FN + 
Sbjct: 48  LDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLT 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L+      NQL  LP  +G+  NL       N  T+LP++      + K
Sbjct: 108 TLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+   L    I     L EL  + N    +P+    L  L  L+L  N++ ++P 
Sbjct: 168 LTLGYNQFKTLPKE-IGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y+ NN L+ALP E+G+L  L  LDL  NQL     E  QL+ L  L L 
Sbjct: 227 EIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLG 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+ LP EIG++  L++L L  N L TL
Sbjct: 287 NNQLTALPKEIGQLKNLQELNLWNNQLTTL 316



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 131/260 (50%), Gaps = 7/260 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DLQ L L  N +  L +++  L  L  L + +N+L+ LP  IG+L  L+ L++  N    
Sbjct: 95  DLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E     +L K     NQ K LP  +G+  NL +   ++N  T LP+       +  L
Sbjct: 155 LPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L  + N L  +P+ IG L  L  LDL  N++ ++P  
Sbjct: 215 NLGYNQLTTLPKE-IEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKE 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   Y+GNN L+ALP E+G+L  L  L+L +NQL    +E  QL+ L  L L N
Sbjct: 274 IGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRN 333

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N  S     I +   +RKLL
Sbjct: 334 NQFS-----IEEKERIRKLL 348



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 147/345 (42%), Gaps = 61/345 (17%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +   KL  +P  I +L  L+ L ++ N +  +P EIG    L   D   NQL  LP 
Sbjct: 52  VLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T+LP+++     +  L+++ N+ T L                
Sbjct: 112 EIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+    L  L +L L  N+  ++P  I    +L E Y+ +N  + LP +  +
Sbjct: 156 --------PKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  NQL     E  QL+ L  L L+NN L+ LP EIG++  L+ L L  N L
Sbjct: 208 LKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +        LK L++                              L L    L+
Sbjct: 268 TTLPKEI------GQLKNLQT------------------------------LYLGNNQLT 291

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           A+P EI +   + +L+L  N +  LP E+    +LQTL L  N+ 
Sbjct: 292 ALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQF 336



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 146/342 (42%), Gaps = 40/342 (11%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           +EL  +L   L++         + ++P ++     +  L +  N+LT+L           
Sbjct: 38  RELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTIL----------- 86

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ IG L  L  LDL  N++ ++P  I    +L   Y+G N L+ALP
Sbjct: 87  -------------PKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALP 133

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L +NQ      E  QL+ L  L L  N    LP EIG++  L++L L
Sbjct: 134 KEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYL 193

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N    L         P   + L++    N      TT    I     L      L L 
Sbjct: 194 NDNQFTIL---------PKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHT----LYLN 240

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L+A+P EI +  ++  LDL  N +  LP E+    +LQTL L  N++   P  I   
Sbjct: 241 NNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEI-GQ 299

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L +L  L L NN L  +P +    +  LQ L L  N  S+ E
Sbjct: 300 LKNLQELNLWNNQLTTLPIE-IGQLQNLQTLYLRNNQFSIEE 340



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L   +LK    E  QL+ L  L L+ N L+ LP EIG++  L+ L L  N L TL  
Sbjct: 52  VLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTL-- 109

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPS 374
                  P  +  L+                +L+T+              G N L+A+P 
Sbjct: 110 -------PKEIGQLK----------------NLLTLYL------------GYNQLTALPK 134

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  L+L  N    LP E     SLQ L L  N+ K  P  I   L +L  L L
Sbjct: 135 EIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEI-GQLKNLQELYL 193

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           ++N    +P   F+ +  L +L+L YN + +LP+      L +L  LYL   QL   P +
Sbjct: 194 NDNQFTILPKK-FEQLKNLHVLNLGYNQLTTLPKE--IEQLKNLHTLYLNNNQLTALPKE 250

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I +L  L+ LDL  N L ++P+    L +L  L L +N ++ALP E+
Sbjct: 251 IGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEI 297



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
            L L     + +P E+   KN  E    D        K+ +  +L  L L +N +  L +
Sbjct: 167 KLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPK 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +++N+L+ LP  IG+LH L+ LD+ +N +  +P EIG    L      
Sbjct: 227 EIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLG 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +NQL  LP  +G+  NL +    NN +T+LP ++     +  L +  N+ ++
Sbjct: 287 NNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFSI 338


>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
           domestica]
          Length = 582

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+LI L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G   ++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLVN  +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLAKIPEDV-SGLVSLEVLILSNNVLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+  LP EL 
Sbjct: 505 LLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 208/435 (47%), Gaps = 56/435 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+   +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N         L   S 
Sbjct: 483 LNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSK 542

Query: 429 LSCLKLDNNPLRQVP 443
           LS + ++N PL  +P
Sbjct: 543 LSIMSIENCPLSHLP 557



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N LN +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L  LP EL 
Sbjct: 479 TNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLAKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 481 NQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 96/229 (41%), Gaps = 47/229 (20%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN----------------I 462
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N                +
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLIM 219

Query: 463 ASLPEN------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
            S+ EN           L +L  L +   QL   P +I    Q+  LDL  N L  +PE 
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPET 279

Query: 517 FKNLTSLTELDLSDNN-----------------------ISALPPELVS 542
             NL+SL  L L  N                        IS LP  L+S
Sbjct: 280 IGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLS 328


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 176/372 (47%), Gaps = 38/372 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIGK+  L  L L+GN L TL         P  +  L++    N  S   TT    I 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTL---------PIEIGKLQNLQDLNLHSNQLTTLSKEIE 321

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               L      LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL L
Sbjct: 322 QLKNLQT----LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSL 377

Query: 411 SRNKIKDWPDAI 422
            +N++  +P  I
Sbjct: 378 YKNRLMTFPKEI 389



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 186/407 (45%), Gaps = 43/407 (10%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y+ +N L+ LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E GKL  L  L+L  NQL     E  QL+ L  L+L +N L+ L  EI ++  L+ L L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  +  L++                              L+L  
Sbjct: 218 DNQLTTL---------PIEIGKLQNL---------------------------HTLNLSD 241

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +  E+ +   +  L+LS N +  LP E+    +L TL LS N++   P  I   L
Sbjct: 242 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI-GKL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   
Sbjct: 301 QNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNN 357

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           QL   P +I +LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 123/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
                 L +L  L+LSDN ++ LP E+
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEI 274



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 528 LSDNNISALPPEL 540
           LSDN ++ LP E+
Sbjct: 216 LSDNQLTTLPIEI 228



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 57/443 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR+VP  VY             +   L+KL L  N I  +   + NL  LT L
Sbjct: 124 LDLRHNKLREVPQVVY-------------QLQSLRKLYLRFNKITTIDPAIENLSNLTQL 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  NK+ E+P+ IG+L  L ++DVS+N + +IP+EIG+   +   D   N+L +LP S+
Sbjct: 171 IIRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESI 230

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N +  LP  L +C  +S L++E N +  L +  ++S T LT +  ++
Sbjct: 231 GNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLAR 290

Query: 194 NLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  +  P  +G  S+      L++  N++  IP  I S    L+   M +N L++LP ++
Sbjct: 291 NKFSSYP--VGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDV 348

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L L+SNQL     +  +L+ L VL +SNN L  +P  IG++T L+ L L  N
Sbjct: 349 GSWKSMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEEN 408

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L S +                             + +T   +L +   +L++    
Sbjct: 409 NLESLPSEI-----------------------------EHLTQLRKLKLQGNKLTV---- 435

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
              +P  +     +T L +  N +++LP E+ +  SL+ L L+ N ++  P   L   + 
Sbjct: 436 ---LPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVLPFE-LALCTK 491

Query: 429 LSCLKLDNNPLRQVPSDGFKDIP 451
           L+ + +++ PL Q+P+   +  P
Sbjct: 492 LALMSVEDCPLSQIPTLAVEGGP 514



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 217/475 (45%), Gaps = 46/475 (9%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S   L+ L   I  +  L  + +  N + K+PDE+G    L     + N L  LP
Sbjct: 53  TRLDLSQLDLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLP 112

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +SL     L      +N +  +P+ +     + KL +  NK+T + +  I + + LT+LI
Sbjct: 113 ASLQNLKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTI-DPAIENLSNLTQLI 171

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L++L+ +D+  N +  IP  I  C  +    +  N L+ LP  +G
Sbjct: 172 IRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIG 231

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTG 307
            L KL  L L  N L      ++ C L LS L+L NN +  LP   +  +T L  + L  
Sbjct: 232 NLVKLNRLGLKYNHLLGLPRSLQNCVL-LSDLNLENNDIETLPDGFLSSLTNLTSVTLAR 290

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N      S  V GP+                           ++ T        L++E  
Sbjct: 291 N---KFSSYPVGGPS------------------------QFTSLGT--------LNMEHN 315

Query: 368 NLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
            +  IP EI+  A  ++ L++  N +  LP ++ S  S+  L L+ N++   PD I   L
Sbjct: 316 QVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDI-GKL 374

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRM 485
            SL  L + NN LR++P      +  LQ LDL   N+ SLP       L  L++L L+  
Sbjct: 375 QSLQVLMVSNNLLRKIPG-SIGQLTNLQCLDLEENNLESLPSE--IEHLTQLRKLKLQGN 431

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L   P  +  L  L IL + +N ++ +P    NL SL EL L+DN +  LP EL
Sbjct: 432 KLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVLPFEL 486



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 42/422 (9%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           ++ L  N + K+ ++L  L  LT+L ++ N L+ LPA++  L  LK LD+  N + ++P 
Sbjct: 77  EIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQLKMLDLRHNKLREVPQ 136

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            +    +L K     N++  +  ++    NL+      N +  +P ++   +++  +DV 
Sbjct: 137 VVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLVTIDVS 196

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  +    I +  ++T L    N L  +PE+IG+L +L RL L  N +L +P S+  
Sbjct: 197 YNELKEIPEE-IGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQN 255

Query: 229 CCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGTLDLHSN 263
           C  L++  + NN +  LP                             + + LGTL++  N
Sbjct: 256 CVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHN 315

Query: 264 QLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           Q+     E       LS L++ +N L+ LP ++G   ++ +L L  N L  L   +    
Sbjct: 316 QVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQ 375

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
           +  +L    + L +   S         I   T L      L LE  NL ++PSEI    +
Sbjct: 376 SLQVLMVSNNLLRKIPGS---------IGQLTNLQC----LDLEENNLESLPSEIEHLTQ 422

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + KL L  N +  LP  L   ++L  L +  N+++D P+ I  +L SL  L L++NPL+ 
Sbjct: 423 LRKLKLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEI-GNLKSLEELYLNDNPLQV 481

Query: 442 VP 443
           +P
Sbjct: 482 LP 483



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 28/237 (11%)

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           S+  +N+D+    ++ DL +++T +   ++  E+ L    L+ +P E+ +   +T L L+
Sbjct: 45  SKCKDNQDTRLDLSQLDLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALN 104

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWP----------------------DAILTSL 426
            N +  LP  L +   L+ L L  NK+++ P                      D  + +L
Sbjct: 105 ENHLTSLPASLQNLKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIENL 164

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           S+L+ L +  N +R++PS+  K +  L  +D+SYN +  +PE      L    +L   R 
Sbjct: 165 SNLTQLIIRENKVREIPSEIGK-LTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNR- 222

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            L + P  I  L +L  L L  N L  +P   +N   L++L+L +N+I  LP   +S
Sbjct: 223 -LTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLS 278


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 187/370 (50%), Gaps = 28/370 (7%)

Query: 35  AGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLK 94
           A    + W+ ++L  + L+     +L  ++ NL  LT L ++ N+LS LP A G L  L 
Sbjct: 11  AQAAKEQWKELNLSGMDLS-----ELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLT 65

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
            L +S N +  +P+  G+ T+L     ++NQ+  LP S+G   +L+    S N + +LPE
Sbjct: 66  HLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPE 125

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
              + + ++ LD+  N LT L ++ + + T L  L  + N L  +P++ G+L+ L  LDL
Sbjct: 126 AFGNLTSLTFLDLNSNPLTGLPDS-VGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDL 184

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +N++ ++P +     SL   Y+  N ++ALP  +G L+ L  L L +NQL         
Sbjct: 185 SENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVN 244

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR- 332
           L  L+ L LS N L+ LP   G +++L  L L+GN L  L  +  N  +   L YL S  
Sbjct: 245 LTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYL-YLNSNQ 303

Query: 333 ---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              LPE+            I    +L    KEL L    L  +P E+ +  ++ KLD+  
Sbjct: 304 LTGLPES------------IGQLNKL----KELILYDNKLLTLPQELTKLTQLKKLDIRN 347

Query: 390 NSIQELPPEL 399
           N + ELPPE+
Sbjct: 348 NDLGELPPEV 357



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 171/327 (52%), Gaps = 13/327 (3%)

Query: 4   ILKAARTS-GSLNLSNRSLRDVPNEV---------YKNFDEAGE-GDKWWEAVDLQKLIL 52
           I +AA+     LNLS   L ++P+E+         Y N ++     + +     L  L L
Sbjct: 10  IAQAAKEQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYL 69

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N +  L E   NL  L  L +++N+++ LP +IG L  L SLD+S N +  +P+  G+
Sbjct: 70  SANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGN 129

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T+L   D +SN L  LP S+G   +L     +NN + +LP+   + + ++ LD+  N+L
Sbjct: 130 LTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQL 189

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L      + + LT L  S N +N +PE+IG+L+ L  L L  N++ ++P SI    +L
Sbjct: 190 NALP-EAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNL 248

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            + Y+  N L+ALP   G LS L  L L  NQL         L  L+ L L++N L+GLP
Sbjct: 249 TDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLP 308

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             IG++  L++L+L  N L TL   L 
Sbjct: 309 ESIGQLNKLKELILYDNKLLTLPQELT 335



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 147/276 (53%), Gaps = 23/276 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N I  L E + NL  LT L++S N+L+ LP A G L  L  LD++ N +  +
Sbjct: 87  LRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGL 146

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G+ T+L     ++NQLK LP S G   +L+    S N + +LPE   + S ++ L 
Sbjct: 147 PDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLY 206

Query: 167 VEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETIG 204
           + GN++  L  ++                      I + T LT+L  S+N LN +PET G
Sbjct: 207 LSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFG 266

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +LS L  L L  N++ ++P +     SL   Y+ +N L+ LP  +G+L+KL  L L+ N+
Sbjct: 267 NLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNK 326

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
           L     E  +L +L  LD+ NN L  LPPE+ +  T
Sbjct: 327 LLTLPQELTKLTQLKKLDIRNNDLGELPPEVKRKYT 362



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 183/363 (50%), Gaps = 42/363 (11%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I + T LT+L  ++N L+ +PE  G+L+ L  L L  N++ ++P +     SL    + N
Sbjct: 35  IGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNN 94

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N ++ALP  +G L+ L +LDL +NQL         L  L+ LDL++N L+GLP  +G +T
Sbjct: 95  NQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLT 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L+ L L  N L+ L  S  N                             +T  T L ++
Sbjct: 155 SLKHLYLNNNQLKALPDSAGN-----------------------------LTSLTFLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
             +L+       A+P        +T L LS N I  LP  + +  +L+ L L  N++   
Sbjct: 186 ENQLN-------ALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTL 238

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P++I+ +L++L+ L L  N L  +P + F ++  L  L LS N + +LPE   F +L  L
Sbjct: 239 PESIV-NLTNLTDLYLSENQLNALP-ETFGNLSSLTDLYLSGNQLNALPET--FGNLSSL 294

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             LYL   QL   P  I +L +L+ L L  N L ++P+    LT L +LD+ +N++  LP
Sbjct: 295 TYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELP 354

Query: 538 PEL 540
           PE+
Sbjct: 355 PEV 357



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 161/351 (45%), Gaps = 44/351 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P  IG+L+ L  L L++N++ ++P +     SL   Y+  N L+ALP   G L+ L
Sbjct: 28  LSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSL 87

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L++NQ+         L  L+ LDLS N L+ LP   G +T+L  L L  NPL  L 
Sbjct: 88  RYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLP 147

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIP 373
            S+ N                                     +TS K L L    L A+P
Sbjct: 148 DSVGN-------------------------------------LTSLKHLYLNNNQLKALP 170

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
                   +T LDLS N +  LP    + +SL  L LS N+I   P++I  +L++L  L 
Sbjct: 171 DSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESI-GNLTNLRYLY 229

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L NN L  +P +   ++  L  L LS N + +LPE   F +L  L +LYL   QL   P 
Sbjct: 230 LWNNQLNTLP-ESIVNLTNLTDLYLSENQLNALPET--FGNLSSLTDLYLSGNQLNALPE 286

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               L  L  L L+ N L  +PE    L  L EL L DN +  LP EL  +
Sbjct: 287 TFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKL 337



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 108/200 (54%), Gaps = 24/200 (12%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL+L GM+LS +PSEI     +T L L+RN +  LP    +  SL  L LS N++   P
Sbjct: 19  KELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALP 78

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE----------- 467
           +A   +L+SL  LKL+NN +  +P +   ++  L  LDLS N + +LPE           
Sbjct: 79  EA-FGNLTSLRYLKLNNNQINALP-ESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFL 136

Query: 468 ---NPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
              + P + LP        L+ LYL   QL+  P     L  L  LDLS+N L ++PE F
Sbjct: 137 DLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAF 196

Query: 518 KNLTSLTELDLSDNNISALP 537
            NL+SLT L LS N I+ALP
Sbjct: 197 GNLSSLTYLYLSGNQINALP 216


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           +EL L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QELVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQEL L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQELVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQELVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|149026334|gb|EDL82577.1| similar to hypothetical protein FLJ20331, isoform CRA_c [Rattus
           norvegicus]
          Length = 479

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 231/487 (47%), Gaps = 68/487 (13%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LPLL ++   HNKL  LP  I  L  LK+L +  N +  IP+     ++L   D SSN+L
Sbjct: 7   LPLLFLI---HNKLKMLPEEITSLKNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRL 63

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             +P+      NL     S+N + +LP +++   ++  LD + N                
Sbjct: 64  ATVPADFALLSNLLRLNLSSNQLKNLPAEISRMKRLKHLDCDAN---------------- 107

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                   LL  +P  +GS+  L  L L +N++  +P     C  L E Y+  N +  L 
Sbjct: 108 --------LLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAENQIEKLG 158

Query: 247 AE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           AE L  L  +  LDL SN+L+    E   L+ L  LDLSNN +S LP  +G +  L+ L 
Sbjct: 159 AEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLA 217

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------T 358
           L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V      T
Sbjct: 218 LEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVT 277

Query: 359 SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            K L       + IP +I++A +   +T ++ S+N + E+P  +   A L+ ++L  N  
Sbjct: 278 LKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRI---AELKEMVLDVN-- 332

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
                    S + LS +           S     +  L  LDL  N ++SLPE    SSL
Sbjct: 333 --------LSFNKLSLV-----------SHELCLLQKLAFLDLRNNFLSSLPEE--MSSL 371

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNI 533
             LQ + L   + +  P  +  +  L  + +S N + S+ P   K + +L+ LDL +N++
Sbjct: 372 TKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENLSTLDLQNNDL 431

Query: 534 SALPPEL 540
             +PPEL
Sbjct: 432 LQIPPEL 438



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 144 LKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISS 203

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 204 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 263

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +   + L     S+   T +P+D+ D +K   ++ ++   N+L  +   +  
Sbjct: 264 LPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAE 323

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 324 LKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 383

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL----SVLDLSNNSLSGLPPEIGKM 297
               PA L  +S L T+ + +NQ+    V+  +++L    S LDL NN L  +PPE+G  
Sbjct: 384 FKVFPAVLYHISTLETILISNNQVGS--VDPLKMKLMENLSTLDLQNNDLLQIPPELGNC 441

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 442 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 478



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 197/436 (45%), Gaps = 48/436 (11%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L HN ++ L E++ +L  L  L++ HN+L+ +P     L  L+ LD+S N +  +P +
Sbjct: 10  LFLIHNKLKMLPEEITSLKNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPAD 69

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
               + L++ + SSNQLK LP+ + R   L       N + ++P D+     +  L +  
Sbjct: 70  FALLSNLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRR 129

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRILSIPSSISG 228
           NKL VL      S   L EL  ++N +  +  E +  L  ++ LDL  N++ S+P  ++ 
Sbjct: 130 NKLRVLPE--FPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMAL 187

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK----EYCVEACQ-----LRLSV 279
             SL    + NN +S+LP  LG L  L  L L  N L+    E   +  Q     LR  +
Sbjct: 188 LQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKI 246

Query: 280 LDLSNNSLSGLPP-----------EIGKMTTLRKL--------LLTGNPLRTLRSSLVNG 320
            D   N    +P             I  + TL+ L        L+  +     ++++V  
Sbjct: 247 KDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTS 306

Query: 321 PTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRLSVTSKEL---------SLEGMNL 369
                + + +++L E     +E      D+     +LS+ S EL          L    L
Sbjct: 307 -----INFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFL 361

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           S++P E+    ++  ++LS N  +  P  L   ++L+T+++S N++       +  + +L
Sbjct: 362 SSLPEEMSSLTKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENL 421

Query: 430 SCLKLDNNPLRQVPSD 445
           S L L NN L Q+P +
Sbjct: 422 STLDLQNNDLLQIPPE 437



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 171/393 (43%), Gaps = 61/393 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  + +   
Sbjct: 107 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAENQIEKLGAEHLQHL 165

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D  SN+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 166 QAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 224

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 225 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYS 284

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  I        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 285 DKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSLVSHE 344

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           PA+L ++ 
Sbjct: 345 LCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PAVLYHI- 394

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                      ST +  LI+     SV               P ++     ++ LDL  N
Sbjct: 395 -----------STLETILISNNQVGSVD--------------PLKMKLMENLSTLDLQNN 429

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 430 DLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 462


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 205/411 (49%), Gaps = 42/411 (10%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
               +E+L E++  L  L VL ++   +  LPA+IG+L  L+ LD+    + ++P+ +G 
Sbjct: 90  GQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQ 149

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
             AL   + S+NQL+ELP S+G+   L     S+N +  LP + +  +++ +L +E N L
Sbjct: 150 LQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLL 209

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           + L +N       L  L+ ++N L+ +P ++G L +L  L+L  N +  +P+ I    SL
Sbjct: 210 SFLPSN-FGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSL 268

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
            E  + +N L  LP E+G+L  L +L +  N+L++   E  QL+ L  L L  N L+ LP
Sbjct: 269 VELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              GK++ L +L L+ N L  L  S+        LK L S                    
Sbjct: 329 RNFGKLSQLEELQLSENKLEALPKSIKR------LKKLSS-------------------- 362

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
              L++++ E+ L   N S I +       +  LDL  N I+ELP E+    +L+ LIL 
Sbjct: 363 ---LNLSNNEIYLFPKNASGIKN-------LIALDLEGNYIEELPEEIQELQNLEFLILY 412

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
            N++++ P   L  LS+L  L + +N     P   ++   M Q+ DL  N+
Sbjct: 413 DNELRNLP-PYLQDLSALRRLDISDNEFEAFPEVLYQ---MRQLKDLILNV 459



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 188/401 (46%), Gaps = 23/401 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDV-SFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            L +   +LS LPA IG+   L+ L +    ++ ++P+EIG    L     +S  +K LP
Sbjct: 62  ALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLP 121

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +S+G+  NL      N  +  LPE L     +  L++  N+L  L  + I     L    
Sbjct: 122 ASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPS-IGQLQALKMAD 180

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N L  +P     L++L  L L  N +  +PS+  G  +L    +  N L  LPA LG
Sbjct: 181 LSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLG 240

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L +L  L+L  N L +   +  QL+ L  LDLS+N L  LPPEIG++  L+ L +T N 
Sbjct: 241 QLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENE 300

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGM 367
           L+ L +        A LK L+         E    +  L  +       S+  EL L   
Sbjct: 301 LQQLPAEF------AQLKNLQ---------ELQLQENKLTALPRNFGKLSQLEELQLSEN 345

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L A+P  I    +++ L+LS N I   P   S   +L  L L  N I++ P+ I   L 
Sbjct: 346 KLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEELPEEI-QELQ 404

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
           +L  L L +N LR +P    +D+  L+ LD+S N   + PE
Sbjct: 405 NLEFLILYDNELRNLPP-YLQDLSALRRLDISDNEFEAFPE 444



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 25/292 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +  +++L E L  L  L  LN+S N+L ELP +IG+L  LK  D+S N + +
Sbjct: 129 NLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQE 188

Query: 106 IPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P+E                        G   AL     + NQL +LP+SLG+   L   
Sbjct: 189 LPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELL 248

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +  +N +  LP  +     + +LD+  N L  L    I     L  L  ++N L  +P  
Sbjct: 249 ELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPE-IGQLQALKSLFITENELQQLPAE 307

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              L  L  L L +N++ ++P +      L E  +  N L ALP  + +L KL +L+L +
Sbjct: 308 FAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSN 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N++  +   A  ++ L  LDL  N +  LP EI ++  L  L+L  N LR L
Sbjct: 368 NEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNL 419



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 175/399 (43%), Gaps = 23/399 (5%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           ++SLP  +   S++  L + G +        I     L  LI +   +  +P +IG L  
Sbjct: 70  LSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQN 129

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL   ++  +P  +    +L    +  N L  LP  +G+L  L   DL SN+L+E 
Sbjct: 130 LRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQEL 189

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L L NN LS LP   G +  L+ L+L  N L  L +SL          
Sbjct: 190 PNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQ----- 244

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKL 385
                              DL  +  ++       EL L    L  +P EI +   +  L
Sbjct: 245 ----------LELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSL 294

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            ++ N +Q+LP E +   +LQ L L  NK+   P      LS L  L+L  N L  +P  
Sbjct: 295 FITENELQQLPAEFAQLKNLQELQLQENKLTALPRNF-GKLSQLEELQLSENKLEALPK- 352

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
             K +  L  L+LS N I   P+N   S + +L  L L    + E P +I  LQ L  L 
Sbjct: 353 SIKRLKKLSSLNLSNNEIYLFPKNA--SGIKNLIALDLEGNYIEELPEEIQELQNLEFLI 410

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  N L+++P   ++L++L  LD+SDN   A P  L  +
Sbjct: 411 LYDNELRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQM 449



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 37/288 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L+LA N +++L   L  L  L +L +  N L +LPA IG+L  L  LD+S N + 
Sbjct: 220 VALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQ 279

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EIG   AL     + N+L++LP+   +  NL + +   N +T+LP +    S++ +
Sbjct: 280 QLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEE 339

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKL  L                        P++I  L +L  L+L  N I   P 
Sbjct: 340 LQLSENKLEAL------------------------PKSIKRLKKLSSLNLSNNEIYLFPK 375

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLD 281
           + SG  +L    +  N +  LP E+ +L  L  L L+ N+L+    Y  +   LR   LD
Sbjct: 376 NASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALR--RLD 433

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGN-----PLRTLRSSLVN---GP 321
           +S+N     P  + +M  L+ L+L  +      ++TL++ L+N   GP
Sbjct: 434 ISDNEFEAFPEVLYQMRQLKDLILNVDQFEPTKIQTLKNRLLNCNIGP 481



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 177/390 (45%), Gaps = 70/390 (17%)

Query: 156 LADCSKMSKLDVEGNKLTVLSNNL------IASWTMLTEL-IASKNLLNGMPETIGSLSR 208
           L    +++ LD+    L +    L      I  ++ L  L +  +  L  +PE IG L  
Sbjct: 47  LLQAERLADLDISYQALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQN 106

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L+   I  +P+SI    +L    +GN  L  LP  LG+L  L  L+L +NQL+E 
Sbjct: 107 LEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEEL 166

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL+ L + DLS+N L  LP E  ++T L +L L  N L  L S+   G   AL  
Sbjct: 167 PPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNF--GGLVALKT 224

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +   L EN        + D +  +       + L L+  +L  +P++I +   + +LDL
Sbjct: 225 LV---LAEN--------QLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDL 273

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S N +Q+LPPE+    +L++L ++ N+                        L+Q+P++  
Sbjct: 274 SDNFLQQLPPEIGQLQALKSLFITENE------------------------LQQLPAE-- 307

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                                  F+ L +LQEL L+  +L   P +  +L QL  L LS+
Sbjct: 308 -----------------------FAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSE 344

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           N L+++P+  K L  L+ L+LS+N I   P
Sbjct: 345 NKLEALPKSIKRLKKLSSLNLSNNEIYLFP 374



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 164/391 (41%), Gaps = 64/391 (16%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +++ P   A   K   LD+E  +  + +  L         L+  +  L+ +P TIG  S 
Sbjct: 23  MSAAPSGQAKAVKEQYLDLEDGRRLLQAERLADLDISYQALVLEEEELSSLPATIGQYSE 82

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L        R LS+               G  AL  LP E+G+L  L  L L+S  +K  
Sbjct: 83  L--------RYLSL--------------WGQEALEELPEEIGQLQNLEVLILNSTGIKRL 120

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL+ L +LDL N  L  LP  +G++  L  L L+ N L  L  S+  G   AL  
Sbjct: 121 PASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSI--GQLQAL-- 176

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           K   L    L  +P+E  +  ++ +L L
Sbjct: 177 --------------------------------KMADLSSNRLQELPNEFSQLTQLEELAL 204

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N +  LP       +L+TL+L+ N++   P ++            DN+ L Q+P+   
Sbjct: 205 ENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDND-LGQLPAQ-I 262

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L  LDLS N +  LP  P    L  L+ L++   +L++ P +  +L+ L+ L L 
Sbjct: 263 GQLQSLVELDLSDNFLQQLP--PEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQ 320

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +N L ++P  F  L+ L EL LS+N + ALP
Sbjct: 321 ENKLTALPRNFGKLSQLEELQLSENKLEALP 351


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 182/382 (47%), Gaps = 42/382 (10%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++    L+ELP  IG+L  ++ + +  NS+  +P EIG    L   + S   L  LP
Sbjct: 86  TTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLP 145

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+  NL       N + +LP ++    ++ +LD+  N+L+ L               
Sbjct: 146 PEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSAL--------------- 190

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                    P  IG L  L RL LH N++ ++P  I    +L +  +  N L  LP E+G
Sbjct: 191 ---------PPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIG 241

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L +L L  N+LK   V   QL  L VL L+ N L+ LPPEI ++  L  L LT N 
Sbjct: 242 QLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNK 301

Query: 310 LRTLRSSLVN---------GPTPALLKY-LRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+   + +++         G +P  L + ++  L E    E +TT   + ++   +   +
Sbjct: 302 LQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKE----EYATTFNQVSSLPPEIGQLT 357

Query: 360 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             ++L+L    L  +P EI +   +  L LS N +  +P E+   A+LQ L LS N++K 
Sbjct: 358 QLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKS 417

Query: 418 WPDAILTSLSSLSCLKLDNNPL 439
            P   L +L+ L  L L NNPL
Sbjct: 418 LPPE-LKALTRLEYLNLSNNPL 438



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 171/356 (48%), Gaps = 39/356 (10%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  IG L  +  + L  N + ++P  I     L    +    L+ LP E+G+LS L +L
Sbjct: 98  LPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSL 157

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +L+ NQL+    E  QL+ L  LD+ NN LS LPPEIG +  L++L L  N L+TL    
Sbjct: 158 NLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLP--- 214

Query: 318 VNGPTPALLKYLR---------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
              P    LK L+          RLP           E+L++           L L    
Sbjct: 215 ---PEIGELKNLQKLAVDYNQLHRLPVEIGQ-----LENLVS-----------LGLPYNK 255

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +P  I +   +  L L+ N +  LPPE+S    L+ L L+ NK++ +P  I+  L++
Sbjct: 256 LKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEII-HLTN 314

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  +P     S  F    + +    ++N ++SLP  P    L  LQ+L L    L
Sbjct: 315 LEVLHLGASPESLAFSVQFH---LKEEYATTFNQVSSLP--PEIGQLTQLQDLNLGSCTL 369

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              P +I +L  L++L LS N L S+P     L +L  L+LS N + +LPPEL ++
Sbjct: 370 LNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKAL 425



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 37/305 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL    LR +P E+              +   LQ+L + +N +  L  ++  L  L  
Sbjct: 156 SLNLYKNQLRTLPPEI-------------GQLKQLQRLDIRNNRLSALPPEIGGLQNLKR 202

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + HN+L  LP  IGEL  L+ L V +N + ++P EIG    LV      N+LK LP S
Sbjct: 203 LTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVS 262

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI------------ 180
           +G+  NL     + N +T LP +++   ++  L +  NKL      +I            
Sbjct: 263 IGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGA 322

Query: 181 --------ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
                     + +  E   + N ++ +P  IG L++L  L+L    +L++P  I    +L
Sbjct: 323 SPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNL 382

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
               + NN L ++P E+G+L+ L  L+L  NQLK    E   L RL  L+LSNN    LP
Sbjct: 383 QMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLEYLNLSNNP---LP 439

Query: 292 PEIGK 296
            E+ K
Sbjct: 440 AEVMK 444



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 43/293 (14%)

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           A + + + LDL    L+ LPP+IG++  ++ + L GN L+TL       P    LK L++
Sbjct: 80  AHETKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLP------PEIGQLKQLKT 133

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                     + +  +L  +   +   S  + L+L    L  +P EI +  ++ +LD+  
Sbjct: 134 ---------LNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRN 184

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LPPE+    +L+ L L  N++K  P  I   L +L  L +D N L ++P +    
Sbjct: 185 NRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEI-GELKNLQKLAVDYNQLHRLPVE-IGQ 242

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L  L L YN +  LP +     L +LQ L L   QL   P +I +L +L +L L+ N
Sbjct: 243 LENLVSLGLPYNKLKHLPVS--IGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSN 300

Query: 509 SLQSIPEGFKNLTSLTELDLSD---------------------NNISALPPEL 540
            LQ  P    +LT+L  L L                       N +S+LPPE+
Sbjct: 301 KLQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEI 353


>gi|386783705|gb|AFJ24747.1| SHOC2 [Schmidtea mediterranea]
          Length = 600

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 235/522 (45%), Gaps = 78/522 (14%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVD-------LQKLILAHNNIEKLKED 63
           S +L+LS+R L  +PN   KN  E    D   E ++       L++  L  N+I     +
Sbjct: 120 SNTLDLSSRGLSSIPNLKDKNIKELMLKDNKLERLEGFPVLMQLERCYLQQNSISVFPVE 179

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L     L VL++  N++  +P  + EL  L+ L +S N I  IPD +     L       
Sbjct: 180 LSKCTGLKVLDLRSNRIEIIPECLFELQNLELLILSSNRIESIPDSVQKLQNLKHLGLDK 239

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N +  LP  +G+   L +   + N I  LPE+L +C+ M  LDV  N+LT L        
Sbjct: 240 NSISRLPPVIGKLQRLMNLNLAFNKIDELPEELCNCASMRDLDVMHNRLTEL-------- 291

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           PE++G+L  L+RL++  N+I  IP S+    +L EF M  N + 
Sbjct: 292 ----------------PESLGNLQNLVRLNIRNNQITKIPISLVKVKNLKEFIMEQNCVE 335

Query: 244 ALPAELGKLSKLGTLD---LHSNQLKEYCVEA-CQLRLSV-LDLSNNSLSGLPPEIGKMT 298
            LP +   LS LG LD   L  N  K +      Q   ++ L++SNN +  +P  I  ++
Sbjct: 336 NLPDQF--LSNLGNLDNVNLSRNAFKTFPTGGPNQFATTMSLNMSNNHIDCIPMGIFSVS 393

Query: 299 TLRKLL-LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
               +L L GN + TL                   +P            D++T  T +  
Sbjct: 394 KHLSILNLRGNEICTL-------------------IP-----------NDVVTWTTLV-- 421

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
              EL L    LS IP+EI     + KL LS N I++LPP + +  +L  L L  N+I+ 
Sbjct: 422 ---ELDLSSNQLSIIPTEIGALVNLQKLHLSSNHIKKLPPTIGNLNALVLLELDDNQIES 478

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            PD I  +L S+  L L  N L+ +P+   K   ++++     ++  +P  P    +  L
Sbjct: 479 LPDEI-GNLQSVVDLNLTTNELKSLPASIGKLKSLMKLRLAENDLRIVP--PEIGEMSSL 535

Query: 478 QELYLR-RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            EL+L+  + L   P ++   ++L IL L    L++IPE  K
Sbjct: 536 TELHLKNNVNLDNLPEELTLCEKLMILSLENCGLRNIPEQVK 577



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 42/367 (11%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L G P     L +L R  L QN I   P  +S C  L    + +N +  +P  L +L  L
Sbjct: 154 LEGFP----VLMQLERCYLQQNSISVFPVELSKCTGLKVLDLRSNRIEIIPECLFELQNL 209

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L SN+++       +L+ L  L L  NS+S LPP IGK+  L  L L  N +  L 
Sbjct: 210 ELLILSSNRIESIPDSVQKLQNLKHLGLDKNSISRLPPVIGKLQRLMNLNLAFNKIDELP 269

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             L N  +   L  + +RL E  +S  +   ++L+    RL++ + +++        IP 
Sbjct: 270 EELCNCASMRDLDVMHNRLTELPESLGNL--QNLV----RLNIRNNQIT-------KIPI 316

Query: 375 EIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            + +   + +  + +N ++ LP + LS+  +L  + LSRN  K +P       ++   L 
Sbjct: 317 SLVKVKNLKEFIMEQNCVENLPDQFLSNLGNLDNVNLSRNAFKTFPTGGPNQFATTMSLN 376

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN----------------------PP 470
           + NN +  +P   F     L IL+L  N I +L  N                        
Sbjct: 377 MSNNHIDCIPMGIFSVSKHLSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTE 436

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
             +L +LQ+L+L    +++ P  I  L  L +L+L  N ++S+P+   NL S+ +L+L+ 
Sbjct: 437 IGALVNLQKLHLSSNHIKKLPPTIGNLNALVLLELDDNQIESLPDEIGNLQSVVDLNLTT 496

Query: 531 NNISALP 537
           N + +LP
Sbjct: 497 NELKSLP 503



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 5/164 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++ +  L +NSI   P ELS C  L+ L L  N+I+  P+  L  L +L  L L +N + 
Sbjct: 162 QLERCYLQQNSISVFPVELSKCTGLKVLDLRSNRIEIIPEC-LFELQNLELLILSSNRIE 220

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P D  + +  L+ L L  N I+ LP  P    L  L  L L   ++ E P ++     
Sbjct: 221 SIP-DSVQKLQNLKHLGLDKNSISRLP--PVIGKLQRLMNLNLAFNKIDELPEELCNCAS 277

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +R LD+  N L  +PE   NL +L  L++ +N I+ +P  LV V
Sbjct: 278 MRDLDVMHNRLTELPESLGNLQNLVRLNIRNNQITKIPISLVKV 321



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 5/180 (2%)

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L+  ++S  P E+ +   +  LDL  N I+ +P  L    +L+ LILS N+I+  PD++ 
Sbjct: 168 LQQNSISVFPVELSKCTGLKVLDLRSNRIEIIPECLFELQNLELLILSSNRIESIPDSV- 226

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L +L  L LD N + ++P    K +  L  L+L++N I  LPE     +   +++L +
Sbjct: 227 QKLQNLKHLGLDKNSISRLPPVIGK-LQRLMNLNLAFNKIDELPE--ELCNCASMRDLDV 283

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
              +L E P  +  LQ L  L++  N +  IP     + +L E  +  N +  LP + +S
Sbjct: 284 MHNRLTELPESLGNLQNLVRLNIRNNQITKIPISLVKVKNLKEFIMEQNCVENLPDQFLS 343


>gi|334348870|ref|XP_001378202.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Monodelphis domestica]
          Length = 1009

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 234/525 (44%), Gaps = 44/525 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V L++L L +NN  +    L  L +L +L++S N L  LP     +  LK L++S N 
Sbjct: 277 QLVKLRQLFLDYNNFWEFPAILERLTMLELLSLSGNYLQVLPQTTANMKNLKILNLSSNQ 336

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
               P+ +   + LVK   S N +  LP  + +  NL +    +N +T LP  +    K+
Sbjct: 337 FSIFPNILCYLSKLVKLRISKNFISSLPKEIKQLKNLEELFLDHNQLTFLPVQIFRLIKL 396

Query: 163 SKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMP 200
            KLD+  NKL +LS+N+                      I S   L  L  + N L  +P
Sbjct: 397 RKLDLVHNKLDILSHNIENFKDLKALLLDNNLLKNLGKEIYSCAQLEYLSLNDNFLEKIP 456

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I  L  L  L +++N++  +   IS    +       N +  +P EL   S++  +DL
Sbjct: 457 NNIYRLKNLRELHINRNKMTVLSEDISHLKYIRVLNFSGNIIKEVPVELKNCSQMRKVDL 516

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N++  + V  C L  L  L+L+ N LS +P ++     L  L L  N        +  
Sbjct: 517 SFNKIYSFPVGLCALSFLEYLNLNGNELSEIPVDLSYSKQLIHLELNQNDFAYFSHHICK 576

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 L   ++++     S         I+  T L V    L L        P E+   
Sbjct: 577 LKNLNFLNLSKNKIHHIPSS---------ISNMTSLQV----LLLSDNKFEIFPQELCTL 623

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL---DN 436
           G +  LD+S N +Q +P E+S+   +Q L +S N+ + +P+  L  LS+L+ LKL   + 
Sbjct: 624 GNLQILDISENQVQFIPSEISNLQVIQKLDISSNRFESFPNE-LCQLSTLTELKLCQKNG 682

Query: 437 NPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
             L QV S+   ++  L+ILD+S+ NI  +P+N     L  L         +   P    
Sbjct: 683 WKLNQV-SEELTNLIHLKILDISHNNIKEIPKN--IGELKRLATFNASNNLIHILPPSFG 739

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L +L+ LD+S+N L ++P    +L SL E++   N +   PPE+
Sbjct: 740 SLNKLQQLDMSENRLTTLPTNLSSLPSLKEINFDGNPLIRPPPEV 784



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 173/409 (42%), Gaps = 59/409 (14%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G + +    L+ L L  N +EK+  ++  L  L  L+++ NK++ L   I  L  ++ L+
Sbjct: 433 GKEIYSCAQLEYLSLNDNFLEKIPNNIYRLKNLRELHINRNKMTVLSEDISHLKYIRVLN 492

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            S N I ++P E+ + + + K D S N++   P  L     L     + N ++ +P DL+
Sbjct: 493 FSGNIIKEVPVELKNCSQMRKVDLSFNKIYSFPVGLCALSFLEYLNLNGNELSEIPVDLS 552

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
              ++  L++  N     S++                        I  L  L  L+L +N
Sbjct: 553 YSKQLIHLELNQNDFAYFSHH------------------------ICKLKNLNFLNLSKN 588

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           +I  IPSSIS   SL    + +N     P EL  L  L  LD+  NQ++    E   L+ 
Sbjct: 589 KIHHIPSSISNMTSLQVLLLSDNKFEIFPQELCTLGNLQILDISENQVQFIPSEISNLQV 648

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           +  LD+S+N     P E+ +++TL +L                            +L + 
Sbjct: 649 IQKLDISSNRFESFPNELCQLSTLTEL----------------------------KLCQK 680

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
              + +   E+L  +     +  K L +   N+  IP  I E   +   + S N I  LP
Sbjct: 681 NGWKLNQVSEELTNL-----IHLKILDISHNNIKEIPKNIGELKRLATFNASNNLIHILP 735

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           P   S   LQ L +S N++   P   L+SL SL  +  D NPL + P +
Sbjct: 736 PSFGSLNKLQQLDMSENRLTTLPTN-LSSLPSLKEINFDGNPLIRPPPE 783



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 4/231 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N+       +  L  L  LN+S NK+  +P++I  +  L+ L +S N     
Sbjct: 557 LIHLELNQNDFAYFSHHICKLKNLNFLNLSKNKIHHIPSSISNMTSLQVLLLSDNKFEIF 616

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+ +   L   D S NQ++ +PS +     +     S+N   S P +L   S +++L 
Sbjct: 617 PQELCTLGNLQILDISENQVQFIPSEISNLQVIQKLDISSNRFESFPNELCQLSTLTELK 676

Query: 167 V---EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +    G KL  +S  L  +   L  L  S N +  +P+ IG L RL   +   N I  +P
Sbjct: 677 LCQKNGWKLNQVSEEL-TNLIHLKILDISHNNIKEIPKNIGELKRLATFNASNNLIHILP 735

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            S      L +  M  N L+ LP  L  L  L  ++   N L     E C+
Sbjct: 736 PSFGSLNKLQQLDMSENRLTTLPTNLSSLPSLKEINFDGNPLIRPPPEVCR 786



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 53/96 (55%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L+ L ++HNNI+++ +++  L  L   N S+N +  LP + G L+ L+ LD+S N + 
Sbjct: 696 IHLKILDISHNNIKEIPKNIGELKRLATFNASNNLIHILPPSFGSLNKLQQLDMSENRLT 755

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
            +P  + S  +L + +   N L   P  + R  +L+
Sbjct: 756 TLPTNLSSLPSLKEINFDGNPLIRPPPEVCRGKDLN 791


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLKNLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  + + IG L  L +L+L +NR+ ++P+ I    +L E Y+ NN L+ LP E+G+
Sbjct: 171 DYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L +L   NN L+ LP EIG++  L+ L L+ N L
Sbjct: 231 LKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +  G    L                                  +EL L    L+
Sbjct: 291 TTLPKEI--GQLENL----------------------------------QELYLNDNQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +       N +  LP E+    +LQ L L+ N++
Sbjct: 315 TLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 359



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS++ L  +P E+              +  +L+ L LA+N  + L +++  L  L  L
Sbjct: 53  LNLSSQKLTTLPKEIK-------------QLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+ +N+L  LP  IG+L  L++L +S N +   P EIG    L K +   NQL  L   +
Sbjct: 100 NLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N +T+L +++     + KL+++ N+L  L N  I     L EL  S 
Sbjct: 160 GQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNE-IGQLQNLQELYLSN 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE IG L  L  L L  N++  +P  I    +L   Y  NN L+ LP E+G+L 
Sbjct: 219 NQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQ 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L  NQL     E  QL  L  L L++N L+ LP EIG++  L+  +   N L  
Sbjct: 279 KLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTM 338

Query: 313 L 313
           L
Sbjct: 339 L 339



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 15/277 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L+++P E+              +  +LQ LIL+ N +    +++  L  L  
Sbjct: 98  ELNLWNNQLKNLPKEI-------------GQLQNLQTLILSVNRLTTFPQEIGQLKNLQK 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ L   IG+L  L+ L++ +N +  +  EIG    L K +   N+LK LP+ 
Sbjct: 145 LNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I     L  L + 
Sbjct: 205 IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQNLKLLYSV 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ LP E+G+L
Sbjct: 264 NNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQL 323

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 324 KNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 360



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+LT L    I     L +L   KN L  +P  IG L  L  L L  N++  +P 
Sbjct: 168 LNLDYNQLTTLLQE-IGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPE 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L    +G+N L+ LP E+G+L  L  L   +N+L     E  QL +L  L LS
Sbjct: 227 EIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLS 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L++L L  N L TL
Sbjct: 287 HNQLTTLPKEIGQLENLQELYLNDNQLTTL 316



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 163/349 (46%), Gaps = 42/349 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++  L+KL L  N L TL 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLL 179

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        LK L+                              +L+L+   L A+P+
Sbjct: 180 QEI------GQLKNLQ------------------------------KLNLDKNRLKALPN 203

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   + +L LS N +  LP E+    +LQ LIL  N++   P  I   L +L  L  
Sbjct: 204 EIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYS 262

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
            NN L  +P +    +  LQ L LS+N + +LP+      L +LQELYL   QL   P +
Sbjct: 263 VNNELTILPQE-IGQLQKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKE 319

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           I +L+ L+      N L  +P+    L +L  L L++N +S+   E + 
Sbjct: 320 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQ 368



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 153/330 (46%), Gaps = 63/330 (19%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +        LK L+
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI------GQLKNLQ 166

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                         +L+L+   L+ +  EI +   + KL+L +N
Sbjct: 167 ------------------------------KLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            ++ LP E+    +LQ L LS N++   P+ I   L +L  L L +N L  +P    K+I
Sbjct: 197 RLKALPNEIGQLQNLQELYLSNNQLTILPEEI-GQLKNLQALILGDNQLTILP----KEI 251

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
             LQ L L Y++ +                     +L   P +I +LQ+L+ L LS N L
Sbjct: 252 GQLQNLKLLYSVNN---------------------ELTILPQEIGQLQKLQYLYLSHNQL 290

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++P+    L +L EL L+DN ++ LP E+
Sbjct: 291 TTLPKEIGQLENLQELYLNDNQLTTLPKEI 320



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 146/318 (45%), Gaps = 22/318 (6%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  NQL     E  QL+ L  L+L  N L  LP EIG++  L++L L+ N L  L
Sbjct: 165 LQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTIL 224

Query: 314 ---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
                 L N     L     + LP+ E  +    K  L ++   L++  +E         
Sbjct: 225 PEEIGQLKNLQALILGDNQLTILPK-EIGQLQNLK-LLYSVNNELTILPQEIGQLQKLQY 282

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   + +L L+ N +  LP E+    +LQT I   N++   P  
Sbjct: 283 LYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQE 342

Query: 422 ILTSLSSLSCLKLDNNPL 439
           I   L +L  LKL+NN L
Sbjct: 343 I-GQLQNLQWLKLNNNQL 359



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ+L L   QL     +I +L+ L+ L+L +N L+++P     L +L EL 
Sbjct: 158 --EIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELY 215

Query: 528 LSDNNISALPPEL 540
           LS+N ++ LP E+
Sbjct: 216 LSNNQLTILPEEI 228


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 196/402 (48%), Gaps = 40/402 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L +L L+   ++ L +++ +L  LT L++  N+L  LP +IG L +LK LD+ +N 
Sbjct: 49  ELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNR 108

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ + + T L K +   NQL  LP +L     +++    +N +T +P  L++ + +
Sbjct: 109 LEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNL 168

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +KL++  N+L  L    +   T LT L  S N L  +P+ IG L+ L  L+L+ N++ ++
Sbjct: 169 TKLNLARNQLEELP-AFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTL 227

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P S+S    L    +G N L+ LP  +G L  L  LD H+N+L         L RLS L 
Sbjct: 228 PDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLS 287

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L++N L+ LP +   +  L  L L+ N L TL   + N           SRL        
Sbjct: 288 LAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCN----------FSRL-------- 329

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                      T L +   EL++       +P  I   GE+  LD+S N +  LP  ++ 
Sbjct: 330 -----------TNLHLAHNELTM-------LPMHIGYLGELEILDVSNNDLGSLPDSVAK 371

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
              L TL LS N+I   P  I  +L+ L  L + N  ++ VP
Sbjct: 372 LDKLTTLNLSGNQIPFLPKFI-ANLTHLCILDVRNTRMK-VP 411



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 12/318 (3%)

Query: 12  GSLNLSNRSLRDVPNEV-----YKNFDEAG-EGDKWWEAVD----LQKLILAHNNIEKLK 61
           G L+LS R L+ +P+ +         D  G E +   E++     L++L L  N +E L 
Sbjct: 54  GRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALP 113

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             L+NL  L+ L   +N+L+ LP  +     +  LD+  N + ++P  + + T L K + 
Sbjct: 114 NSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNL 173

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           + NQL+ELP+ LG+  +L+    S N +  LP+ + + + +++L++ GN+L  L ++L +
Sbjct: 174 ARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSL-S 232

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L  L    NLL  +PE+IG+L  L  LD H NR+ S+P SI     L+   + +N 
Sbjct: 233 NLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNK 292

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ LP +   L +L TLDL  N L       C   RL+ L L++N L+ LP  IG +  L
Sbjct: 293 LTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGEL 352

Query: 301 RKLLLTGNPLRTLRSSLV 318
             L ++ N L +L  S+ 
Sbjct: 353 EILDVSNNDLGSLPDSVA 370



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 185/388 (47%), Gaps = 43/388 (11%)

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P D ++ + + +LD+   +L  L +N I     LTEL    N L  +PE+IG+L+ L R
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDN-IGDLIHLTELDLRGNELETLPESIGNLTLLKR 101

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR+ ++P+S+     L++   G N L+ LP  L   +++  LD+  N+L      
Sbjct: 102 LDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHY 161

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                 L+ L+L+ N L  LP  +GK+T L  L L+ NPL+                   
Sbjct: 162 LSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLK------------------- 202

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
            +LP            D I   T L+    EL L G  L  +P  +    ++  LD+  N
Sbjct: 203 -QLP------------DFIGELTNLT----ELELYGNQLGTLPDSLSNLHQLYHLDIGGN 245

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP  + +  +L  L    N++   P++I  +L  LSCL L +N L ++P      +
Sbjct: 246 LLTTLPESIGALENLSVLDAHNNRLTSLPESI-GNLQRLSCLSLAHNKLTRLPEQT-SHL 303

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L  LDLSYN + +LP+     +   L  L+L   +L   P  I  L +L ILD+S N 
Sbjct: 304 LRLSTLDLSYNNLMTLPD--FVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNND 361

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALP 537
           L S+P+    L  LT L+LS N I  LP
Sbjct: 362 LGSLPDSVAKLDKLTTLNLSGNQIPFLP 389



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 42/297 (14%)

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P +  +L+ LG LDL   +L+        L  L+ LDL  N L  LP  IG +T L++L
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRL 102

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  L +SL N                                 TRLS    +L 
Sbjct: 103 DLKWNRLEALPNSLKN--------------------------------LTRLS----KLE 126

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
                L+ +P  +    +IT+LD+  N +  +P  LS+  +L  L L+RN++++ P A L
Sbjct: 127 FGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELP-AFL 185

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L+ L+ L L  NPL+Q+P D   ++  L  L+L  N + +LP++   S+L  L  L +
Sbjct: 186 GKLTHLTHLNLSANPLKQLP-DFIGELTNLTELELYGNQLGTLPDS--LSNLHQLYHLDI 242

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
               L   P  I  L+ L +LD   N L S+PE   NL  L+ L L+ N ++ LP +
Sbjct: 243 GGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQ 299



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 7/181 (3%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L ++P  I +   +T+LDL  N ++ LP  + +   L+ L L  N+++  P++
Sbjct: 56  LDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNS 115

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
            L +L+ LS L+   N L ++P    GF  I  L I D    +  +P     S+  +L +
Sbjct: 116 -LKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGD--NRLTRVPHY--LSNFTNLTK 170

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L R QL E P  + +L  L  L+LS N L+ +P+    LT+LTEL+L  N +  LP  
Sbjct: 171 LNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDS 230

Query: 540 L 540
           L
Sbjct: 231 L 231



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
           ++P D   ++  L  LDLS+  + SLP+N     L HL EL LR  +L   P  I  L  
Sbjct: 42  RIPRDA-SELAGLGRLDLSFRRLQSLPDN--IGDLIHLTELDLRGNELETLPESIGNLTL 98

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L+ LDL  N L+++P   KNLT L++L+   N ++ LP  L   
Sbjct: 99  LKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGF 142


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 179/373 (47%), Gaps = 40/373 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + T        LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL 
Sbjct: 325 NLQT--------LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 410 LSRNKIKDWPDAI 422
           L +N++  +P  I
Sbjct: 377 LYKNRLMTFPKEI 389



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 178/367 (48%), Gaps = 38/367 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++P  
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+L +
Sbjct: 251 IGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L  EI ++  L+ L L+ N L  L         P  +  L++             
Sbjct: 311 NQLTTLSKEIEQLKNLQTLSLSYNRLVIL---------PKEIGQLQNL------------ 349

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL+L    L+A+P EI +   +  L L +N +   P E+    +
Sbjct: 350 ---------------QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394

Query: 405 LQTLILS 411
           LQTL L 
Sbjct: 395 LQTLYLG 401



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 186/407 (45%), Gaps = 43/407 (10%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y+ +N L+ LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E GKL  L  L+L  NQL     E  QL+ L  L+L +N L+ L  EI ++  L+ L L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  +  L++                              L+L  
Sbjct: 218 DNQLTTL---------PIEIGKLQNL---------------------------HTLNLSD 241

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +P EI +   +  L+LS N +  LP E+    +L TL LS N++      I   L
Sbjct: 242 NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI-GKL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   
Sbjct: 301 QNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNN 357

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           QL   P +I +LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +T+LP ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 125/267 (46%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P     L +L  L+LSDN ++ LP E+
Sbjct: 248 PIEIGKLQNLHTLNLSDNQLTTLPIEI 274


>gi|6850952|emb|CAB71137.1| vartul-2 protein [Drosophila melanogaster]
          Length = 1247

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLKELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|24650336|ref|NP_733156.1| scribbled, isoform C [Drosophila melanogaster]
 gi|23172364|gb|AAN14078.1| scribbled, isoform C [Drosophila melanogaster]
          Length = 1247

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 203/443 (45%), Gaps = 76/443 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VY+                L  L L  N ++ + +++ NL  LT+L
Sbjct: 173 LDLRHNKLTEIPDVVYR-------------LTSLTTLYLRFNRLKYVSDNICNLTRLTML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   NK+ ELPA IGEL  L + DVS N +  +P EIG    L   D   N+L +LP ++
Sbjct: 220 SFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS + LT +  S+
Sbjct: 280 GNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSR 339

Query: 194 ------------------------NLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISG 228
                                   N ++ +P  I S SR L +L++ +N + ++P  I  
Sbjct: 340 NNFTSYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGS 399

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             ++ E  +G N L  LP ++  L  L  L L +N LK        L +L VLDL  N +
Sbjct: 400 WVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRI 459

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP +IG MT L+KL+L  N +  L         P  + +L++                
Sbjct: 460 DMLPNDIGLMTELQKLILQSNQITVL---------PRSIGHLKN---------------- 494

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
                T LSV          NLS +P E+     +  L L+ N ++  LP EL+ C +L 
Sbjct: 495 ----LTYLSVGEN-------NLSCLPEEVGTLDSLESLYLNDNPNLHNLPFELALCKNLG 543

Query: 407 TLILSRNKIKDWPDAILTSLSSL 429
            + +    +   P  I+    SL
Sbjct: 544 IMSIENCPLSHIPAEIVAGGPSL 566



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 238/517 (46%), Gaps = 28/517 (5%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILA-HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAI 87
           K F  A         VD +K+++  H +  K K    RN P+   L+VS   +       
Sbjct: 42  KKFSTASSIGSSTSLVDSKKIVMVKHPDSNKAKPTTKRNKPIQAELDVSKEFVR------ 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
              + +K LD+S  SI  +P  +     L +F    N+L  LP  +G   NL     S N
Sbjct: 96  CRENCVKRLDLSKASITILPSSVKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSEN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +TSLP  L +   +  LD+  NKLT + + ++   T LT L    N L  + + I +L+
Sbjct: 156 ALTSLPNTLDNLKLLRVLDLRHNKLTEIPD-VVYRLTSLTTLYLRFNRLKYVSDNICNLT 214

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           RL  L   +N+I  +P+ I    +L  F + +N L  LP E+GK  +L +LD+  N+L +
Sbjct: 215 RLTMLSFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLD 274

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                  L  L+ L L  N L+ +P  +     + +  + GN +  L   L+      L 
Sbjct: 275 LPDTIGNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLL-ASLSCLT 333

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKL 385
               SR   N  S  +              V +  +++E   +  IP  I+  +  +TKL
Sbjct: 334 TITLSR--NNFTSYPAGGPAQF--------VNAYSINVEHNQIDKIPYGIFSRSRNLTKL 383

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           ++  N +  LP ++ S  ++  L L  N++   PD I   L SL  L L NN L+++P+ 
Sbjct: 384 NMKENLLNALPLDIGSWVTMVELNLGTNQLMKLPDDI-QCLQSLEVLILSNNLLKRIPTT 442

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              ++  L++LDL  N I  LP +     +  LQ+L L+  Q+   P  I  L+ L  L 
Sbjct: 443 -MVNLHKLRVLDLEENRIDMLPND--IGLMTELQKLILQSNQITVLPRSIGHLKNLTYLS 499

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           + +N+L  +PE    L SL  L L+DN N+  LP EL
Sbjct: 500 VGENNLSCLPEEVGTLDSLESLYLNDNPNLHNLPFEL 536



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 205/461 (44%), Gaps = 81/461 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L   L NL LL VL++ HNKL+E+P  +  L  L +L + FN +  
Sbjct: 146 NLETLALSENALTSLPNTLDNLKLLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFNRLKY 205

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N++KELP+ +G  +NL  F  S+N +  LP ++  C ++S L
Sbjct: 206 VSDNICNLTRLTMLSFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSL 265

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           DV+ N+L                          +P+TIG+L  L RL L  NR+ +IP S
Sbjct: 266 DVQHNELL------------------------DLPDTIGNLVALTRLGLRYNRLTNIPKS 301

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           ++ C  + EF +  N +S LP   L  LS L T+ L  N    Y               V
Sbjct: 302 LANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSRNNFTSYPAGGPAQFVNAYSINV 361

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           E  Q+             L+ L++  N L+ LP +IG   T+ +L L  N L  L     
Sbjct: 362 EHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVTMVELNLGTNQLMKL----- 416

Query: 319 NGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
               P  ++ L+S     L  N      TT  +L  +        + L LE   +  +P+
Sbjct: 417 ----PDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKL--------RVLDLEENRIDMLPN 464

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           +I    E+ KL L  N I  LP  +    +L  L +  N +   P+ + T L SL  L L
Sbjct: 465 DIGLMTELQKLILQSNQITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGT-LDSLESLYL 523

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++NP          ++P    L  +  I S+ EN P S +P
Sbjct: 524 NDNP-------NLHNLPFELALCKNLGIMSI-ENCPLSHIP 556



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +E  L G  L  +P EI     +  L LS N++  LP  L +   L+ L L  NK+ + P
Sbjct: 125 REFYLYGNKLVTLPPEIGYLSNLETLALSENALTSLPNTLDNLKLLRVLDLRHNKLTEIP 184

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D +   L+SL+ L L  N L+ V SD   ++  L +L    N I  LP       L +L 
Sbjct: 185 DVVY-RLTSLTTLYLRFNRLKYV-SDNICNLTRLTMLSFRENKIKELPAG--IGELVNLV 240

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
              +    L   P +I +  QL  LD+  N L  +P+   NL +LT L L  N ++ +P 
Sbjct: 241 TFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLRYNRLTNIPK 300

Query: 539 ELVS 542
            L +
Sbjct: 301 SLAN 304


>gi|124008815|ref|ZP_01693503.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985606|gb|EAY25491.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 614

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 230/500 (46%), Gaps = 38/500 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N + KL + + NL  L VLN+  N     P    +L  LKSLD+  N + +
Sbjct: 117 NLKVLNLYQNRLGKLPDAVLNLRNLEVLNLGKNGFHRFPDHFDKLTSLKSLDLGDNFLTE 176

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+ T L + + S NQ+K LP  LGR   L   K   N I  LPE       + +L
Sbjct: 177 IPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQIVELPETFDQLENLEEL 236

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E NK T     L+    +    I   N +  +P  +  ++ L  L +  N++ S+PS 
Sbjct: 237 RLERNKFTQFPAALLKLPKLKKLYIFD-NEIEALPPEVSQMTTLEHLQMSGNQLKSLPSE 295

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L   Y+  N ++ LP E+ +L  L  L L  N+L        +L +L  L L +
Sbjct: 296 IGSLPQLKIAYLEYNEIAELPPEISQLENLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHH 355

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNP---LRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           N+L+ LP  I +M  L++L +  N    L  +  SL +  T  +     S +P + D   
Sbjct: 356 NNLTELPASIAQMKGLKELDVRNNEGLDLANVFKSLEHIETVHVQAKQFSSIPVDADHWQ 415

Query: 342 S----TTKEDLITM---ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                T  +  +T    A   +V   +LS+    L+ +P  +    ++ + ++ +N + +
Sbjct: 416 YLPFLTLDQQGLTQLPKALEQTVLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGK 475

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP  L +C +++ L +  N + + P  ++  L  L  + LDNN L  +P +  KD+  L 
Sbjct: 476 LPDALGNCKAMKWLHVGSNALTELP-TVIGELEDLQEVYLDNNQLMALPKE-IKDLKKLM 533

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           +++L+ N                        QL   PT+I  +  ++ L L+ N L  +P
Sbjct: 534 VVNLANN------------------------QLTTLPTEITEIPYIQYLYLNNNQLTDLP 569

Query: 515 EGFKNLTSLTELDLSDNNIS 534
           EG +N   L EL+L  N +S
Sbjct: 570 EGIENWVVLQELNLKGNPMS 589



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 24/365 (6%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L+ +P  +  L  L  L+L+QNR+  +P ++    +L    +G N     P    K
Sbjct: 101 SSNFLSTIPFGLTHLRNLKVLNLYQNRLGKLPDAVLNLRNLEVLNLGKNGFHRFPDHFDK 160

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L+ L +LDL  N L E   E   L L   L++S N +  LPPE+G+++ L+ L +  N +
Sbjct: 161 LTSLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQI 220

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENE---------------DSEASTTKEDLITMATRL 355
             L  +         L+  R++  +                 D+E      ++  M T  
Sbjct: 221 VELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFDNEIEALPPEVSQMTTL- 279

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               + L + G  L ++PSEI    ++    L  N I ELPPE+S   +L+ L L  NK+
Sbjct: 280 ----EHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLENLEYLSLEHNKL 335

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
              P   L  L  L  L L +N L ++P+     +  L+ LD+  N   L     F SL 
Sbjct: 336 TGLPQG-LEKLEKLEFLHLHHNNLTELPA-SIAQMKGLKELDVRNN-EGLDLANVFKSLE 392

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           H++ ++++  Q    P D    Q L  L L Q  L  +P+  +    LT+L + DN ++ 
Sbjct: 393 HIETVHVQAKQFSSIPVDADHWQYLPFLTLDQQGLTQLPKALEQTVLLTDLSMGDNELTT 452

Query: 536 LPPEL 540
           LP  L
Sbjct: 453 LPETL 457



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 40/365 (10%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N IE L  ++  +  L  L +S N+L  LP+ IG L  LK   + +N I ++P EI    
Sbjct: 264 NEIEALPPEVSQMTTLEHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLE 323

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L       N+L  LP  L +   L      +N +T LP  +A    + +LDV  N+   
Sbjct: 324 NLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQMKGLKELDVRNNEGLD 383

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L+N   +   + T  + +K   + +P        L  L L Q  +  +P ++     L +
Sbjct: 384 LANVFKSLEHIETVHVQAKQF-SSIPVDADHWQYLPFLTLDQQGLTQLPKALEQTVLLTD 442

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             MG+N L+ LP  LG L KL   ++  N+L +    +  C+  +  L + +N+L+ LP 
Sbjct: 443 LSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCK-AMKWLHVGSNALTELPT 501

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IG++  L+++ L  N L  L         P  +K L+                      
Sbjct: 502 VIGELEDLQEVYLDNNQLMAL---------PKEIKDLK---------------------- 530

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
            +L V    ++L    L+ +P+EI E   I  L L+ N + +LP  + +   LQ L L  
Sbjct: 531 -KLMV----VNLANNQLTTLPTEITEIPYIQYLYLNNNQLTDLPEGIENWVVLQELNLKG 585

Query: 413 NKIKD 417
           N + +
Sbjct: 586 NPMSE 590



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 193/461 (41%), Gaps = 66/461 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           E+  ++ R   L     S+N ++++P  L     +  L++  N+L  L + ++ +   L 
Sbjct: 84  EVLQNIERMFGLEKINLSSNFLSTIPFGLTHLRNLKVLNLYQNRLGKLPDAVL-NLRNLE 142

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L   KN  +  P+    L+ L  LDL  N +  IP  +     L E  +  N +  LP 
Sbjct: 143 VLNLGKNGFHRFPDHFDKLTSLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPP 202

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD------------------------LS 283
           ELG+LS L  L +  NQ+ E      QL                              + 
Sbjct: 203 ELGRLSALKWLKIQQNQIVELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIF 262

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPENEDSEAS 342
           +N +  LPPE+ +MTTL  L ++GN L++L S +  G  P L + YL      NE +E  
Sbjct: 263 DNEIEALPPEVSQMTTLEHLQMSGNQLKSLPSEI--GSLPQLKIAYLEY----NEIAELP 316

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  +          LSLE   L+ +P  + +  ++  L L  N++ ELP  ++  
Sbjct: 317 PEISQLENLEY--------LSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQM 368

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP--SDGFKDIPMLQI----- 455
             L+ L +  N+  D  + +  SL  +  + +       +P  +D ++ +P L +     
Sbjct: 369 KGLKELDVRNNEGLDLAN-VFKSLEHIETVHVQAKQFSSIPVDADHWQYLPFLTLDQQGL 427

Query: 456 -------------LDLSYN---IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
                         DLS     + +LPE     +L  L+   +++ +L + P  +   + 
Sbjct: 428 TQLPKALEQTVLLTDLSMGDNELTTLPET--LGNLVKLERFNVQKNKLGKLPDALGNCKA 485

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++ L +  N+L  +P     L  L E+ L +N + ALP E+
Sbjct: 486 MKWLHVGSNALTELPTVIGELEDLQEVYLDNNQLMALPKEI 526



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V L  L +  N +  L E L NL  L   NV  NKL +LP A+G    +K L V  N+
Sbjct: 436 QTVLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNA 495

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + ++P  IG    L +    +NQL  LP  +     L     +NN +T+LP ++ +   +
Sbjct: 496 LTELPTVIGELEDLQEVYLDNNQLMALPKEIKDLKKLMVVNLANNQLTTLPTEITEIPYI 555

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTEL 189
             L +  N+LT L    I +W +L EL
Sbjct: 556 QYLYLNNNQLTDLPEG-IENWVVLQEL 581



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 70/129 (54%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++  +  N + KL + L N   +  L+V  N L+ELP  IGEL  L+ + +  N +M
Sbjct: 461 VKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALTELPTVIGELEDLQEVYLDNNQLM 520

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L+  + ++NQL  LP+ +     +     +NN +T LPE + +   + +
Sbjct: 521 ALPKEIKDLKKLMVVNLANNQLTTLPTEITEIPYIQYLYLNNNQLTDLPEGIENWVVLQE 580

Query: 165 LDVEGNKLT 173
           L+++GN ++
Sbjct: 581 LNLKGNPMS 589



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 45/293 (15%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RL 333
           L  ++LS+N LS +P  +  +  L+ L L  N L  L  +++N     +L   ++   R 
Sbjct: 95  LEKINLSSNFLSTIPFGLTHLRNLKVLNLYQNRLGKLPDAVLNLRNLEVLNLGKNGFHRF 154

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P++ D   S                 K L L    L+ IP E+     + +L++S N I+
Sbjct: 155 PDHFDKLTSL----------------KSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIK 198

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAI---------------LTSLSSLSCLK----- 433
            LPPEL   ++L+ L + +N+I + P+                  T   +          
Sbjct: 199 HLPPELGRLSALKWLKIQQNQIVELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKK 258

Query: 434 --LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
             + +N +  +P +    +  L+ L +S N + SLP      SLP L+  YL   ++ E 
Sbjct: 259 LYIFDNEIEALPPE-VSQMTTLEHLQMSGNQLKSLPSE--IGSLPQLKIAYLEYNEIAEL 315

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P +I +L+ L  L L  N L  +P+G + L  L  L L  NN++ LP  +  +
Sbjct: 316 PPEISQLENLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQM 368



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 51/86 (59%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  DLQ++ L +N +  L +++++L  L V+N+++N+L+ LP  I E+  ++ L ++ N 
Sbjct: 505 ELEDLQEVYLDNNQLMALPKEIKDLKKLMVVNLANNQLTTLPTEITEIPYIQYLYLNNNQ 564

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKE 128
           +  +P+ I +   L + +   N + E
Sbjct: 565 LTDLPEGIENWVVLQELNLKGNPMSE 590


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 56/435 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPPVVYR-LD------------SLTTLYLRFNRITAVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N         L   S 
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSK 542

Query: 429 LSCLKLDNNPLRQVP 443
           LS + ++N PL  +P
Sbjct: 543 LSIMSIENCPLSHLP 557



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 220/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ LG  LNL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  +   ++     LT L    N +  + + I +L +L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPP-VVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 199/419 (47%), Gaps = 44/419 (10%)

Query: 128 ELPSSLGRCL--NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           E+   L RC   N +    S   I +LP  + + +++++L +  NKL  L   L     +
Sbjct: 89  EVMKELNRCREENSARLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNL 148

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           +T L  S+N L  +P+++ +L +L  LDL  N++  IP  +    SL   Y+  N ++A+
Sbjct: 149 MT-LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRITAV 207

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             ++  L KL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T +  L 
Sbjct: 208 EKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLD 267

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  ++ N                                   LS  ++ L L
Sbjct: 268 LQHNELLDLPDTIGN-----------------------------------LSSLNR-LGL 291

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAIL 423
               LSAIP  + +   + +L+L  N+I  LP  L SS   L +L L+RN  + +P    
Sbjct: 292 RYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGP 351

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
           +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   + EL L
Sbjct: 352 SQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNL 409

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
              QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 410 ATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 208/435 (47%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L  L L+ N++  L + L NL  L +L++ HNKL E+P  +  L  L +L + FN I 
Sbjct: 146 LNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 AVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++ A+P  + E  ++T+L L  N +Q LP EL    +L TL LS N +   
Sbjct: 102 SARLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++P   ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPPVVYR-LDSLTTLYLRFNRITAVEKD-IKNLPKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 209/468 (44%), Gaps = 67/468 (14%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KL+  P  I ++ +L ++  + N I ++P E+G  TAL       N+L  LP S+G   N
Sbjct: 2   KLTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTN 61

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS-NNLIASWTMLTELIASKNLLN 197
           L       N +  +P  + +C  +  +DV  N L  L     I+   +L EL  + N ++
Sbjct: 62  LQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQID 121

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P T+  L+ L  LD+  N + S  + ++    L       NA + LP E+ K++ L  
Sbjct: 122 SIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRE 181

Query: 258 LDLHSNQLKEYCVEACQLRLS---VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           L +  NQ++     A   +L+   VL L  N ++ LP  I K T LR+L    N      
Sbjct: 182 LSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYN------ 235

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
            SLV+  TP  ++ L+ RL                          K +     +L  IP 
Sbjct: 236 -SLVD--TPPDIRELK-RL--------------------------KRIDFSHNSLRGIPP 265

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           +I    E+  LDLS N +QELP E+    SLQ+L  S N+I   P  +    +SL+ L  
Sbjct: 266 DIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSA 325

Query: 435 DNNPLRQ--VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           DNN +    +P +   ++  L+  DLS N+ S                          P+
Sbjct: 326 DNNAITDPTLPVE-LGNLRNLERFDLSSNLLS------------------------RLPS 360

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            I RL+ L   +++ N L +IP   K L SL EL L DN + ++PPE+
Sbjct: 361 SIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLISMPPEI 408



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 240/508 (47%), Gaps = 30/508 (5%)

Query: 47  LQKLILAHNNIEKLK--EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           L+ + ++HNN+ +L     +  L LL  L V+HN++  +P  +  L+ LK LDVS N + 
Sbjct: 85  LRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLT 144

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
                +     LV  + + N   ELP  + +  NL +     N I S+P D+A   +++ 
Sbjct: 145 SFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIP-DIAALFQLTN 203

Query: 165 LDV---EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           L+V     N++T L  + I+ +T L EL  + N L   P  I  L RL R+D   N +  
Sbjct: 204 LEVLYLRYNQVTFLPGS-ISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRG 262

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSV 279
           IP  I     +    +  N L  LP E+G ++ L +LD  +NQ+    VE  A +  L++
Sbjct: 263 IPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTL 322

Query: 280 LDLSNNSLSG--LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           L   NN+++   LP E+G +  L +  L+ N L  L         P+ +K L S +  N 
Sbjct: 323 LSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRL---------PSSIKRLESLVYFNV 373

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           +S   TT    I    +   +  EL L+   L ++P EI     +T L L  N    +P 
Sbjct: 374 NSNRLTT----IPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPT 429

Query: 398 EL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            +     +L+ L    N+++    +I + LS L+ L L NN LR +P +       L+ L
Sbjct: 430 TMIFQLFTLEKLEAGDNRLRSVSPSI-SQLSCLTLLSLKNNNLRVLPRE-LGRCTGLKTL 487

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L+ N I ++P+      L  L+ L L +  L   P  I  L  LR L    N +  +P 
Sbjct: 488 SLNANDIIAIPDQ--LCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNLIMRLPP 545

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
            F +LTSL ELD+S N  + +P  L+ +
Sbjct: 546 SFSSLTSLRELDMSKNKFTNIPQSLLDL 573



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 192/413 (46%), Gaps = 40/413 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++  +L+ L L +N +  L   +     L  L+ ++N L + P  I EL  LK +D S N
Sbjct: 199 FQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHN 258

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           S+  IP +IG+   +   D S NQL+ELP  +G   +L     SNN I  LP +      
Sbjct: 259 SLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVE------ 312

Query: 162 MSKLDVEGNKLTVLS--NNLIASWTMLTEL---------IASKNLLNGMPETIGSLSRLI 210
              L+     LT+LS  NN I   T+  EL           S NLL+ +P +I  L  L+
Sbjct: 313 ---LEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLV 369

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-C 269
             +++ NR+ +IP  + G  SL E ++ +N L ++P E+G LS L TL L  NQ      
Sbjct: 370 YFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPT 429

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
               QL  L  L+  +N L  + P I +++ L  L L  N LR L   L  G    L   
Sbjct: 430 TMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPREL--GRCTGL--- 484

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLD 386
                        S    D+I +  +L   +  + L+L+   L  +P  I     +  L 
Sbjct: 485 ----------KTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLR 534

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
              N I  LPP  SS  SL+ L +S+NK  + P ++L  L+ L+ L+  +NP+
Sbjct: 535 FRDNLIMRLPPSFSSLTSLRELDMSKNKFTNIPQSLL-DLTGLTRLRCGHNPI 586



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 230/527 (43%), Gaps = 58/527 (11%)

Query: 51  ILAHNNIEKLKEDLRNLP----LLTVLN---VSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           I   +NI   K +++ LP    LLT L    +  N+L  LP +IG L  L+ + +  N +
Sbjct: 13  IFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNLQVISLEENKL 72

Query: 104 MKIPDEIGSATALVKFDCSSNQLKEL--PSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +IP +I +  +L   D S N L+ L  P  + R   L + + ++N I S+P  ++  + 
Sbjct: 73  KEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNN 132

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LDV  N LT   + ++     L  L  +KN    +P  I  ++ L  L +  N+I S
Sbjct: 133 LKILDVSSNHLTSF-DTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRS 191

Query: 222 IP--SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
           IP  +++    +L   Y+  N ++ LP  + K + L  LD   N L +   +  +L RL 
Sbjct: 192 IPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLK 251

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            +D S+NSL G+PP+IG +  +  L L+ N L+ L         P  + ++ S       
Sbjct: 252 RIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQEL---------PREVGFMTSL------ 296

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAI-----PSEIWEAGEITKLDLSRNSIQ 393
                +   ++ +   L      L+L   + +AI     P E+     + + DLS N + 
Sbjct: 297 QSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLS 356

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP---------- 443
            LP  +    SL    ++ N++   P  +   L SL  L L +N L  +P          
Sbjct: 357 RLPSSIKRLESLVYFNVNSNRLTTIPPEV-KGLKSLIELHLKDNLLISMPPEIGSLSSLT 415

Query: 444 ---SDG--FKDIPMLQILDLSYNIASLPE--------NPPFSSLPHLQELYLRRMQLREA 490
               DG  F  IP   I  L + +  L          +P  S L  L  L L+   LR  
Sbjct: 416 TLSLDGNQFMSIPTTMIFQL-FTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVL 474

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           P ++ R   L+ L L+ N + +IP+    L  L  L L  N +  LP
Sbjct: 475 PRELGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLP 521



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 23/313 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-LTV 72
           L+LS   L+++P EV                  LQ L  ++N I  L  +L  L   LT+
Sbjct: 276 LDLSYNQLQELPREV-------------GFMTSLQSLDFSNNQIVFLPVELEALETSLTL 322

Query: 73  LNVSHNKLSE--LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           L+  +N +++  LP  +G L  L+  D+S N + ++P  I    +LV F+ +SN+L  +P
Sbjct: 323 LSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNRLTTIP 382

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +    +L +    +N + S+P ++   S ++ L ++GN+   +   +I     L +L 
Sbjct: 383 PEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPTTMIFQLFTLEKLE 442

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
           A  N L  +  +I  LS L  L L  N +  +P  +  C  L    +  N + A+P +L 
Sbjct: 443 AGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPRELGRCTGLKTLSLNANDIIAIPDQLC 502

Query: 251 KLSKLGTLDLHSNQLKEYCV----EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            L++L  L L  N L   C       C + L  L   +N +  LPP    +T+LR+L ++
Sbjct: 503 GLARLRRLTLDKNGL---CFLPDTIGCLVNLRSLRFRDNLIMRLPPSFSSLTSLRELDMS 559

Query: 307 GNPLRTLRSSLVN 319
            N    +  SL++
Sbjct: 560 KNKFTNIPQSLLD 572


>gi|195146028|ref|XP_002013992.1| GL23097 [Drosophila persimilis]
 gi|194102935|gb|EDW24978.1| GL23097 [Drosophila persimilis]
          Length = 1247

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 15/314 (4%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           A ++  S  L+ + + D+P+++           K  ++  LQ    + N I KL      
Sbjct: 127 ATQSQKSCGLAVQDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFTQ 173

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  LT+L ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++
Sbjct: 174 LKNLTILGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 233

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    L
Sbjct: 234 EDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSL 292

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           T+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LP
Sbjct: 293 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELP 352

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           A +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L +
Sbjct: 353 ASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDV 412

Query: 306 TGNPLRTLRSSLVN 319
           +GN L  L  SLVN
Sbjct: 413 SGNQLLYLPYSLVN 426



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 197/446 (44%), Gaps = 74/446 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLNRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHN---------------------KLSELPAAIG--ELHMLKSLDV 98
            D++N   L  L+VS N                     + S+    I        KS  +
Sbjct: 77  PDIQNFENLVELDVSRNARTLSILFSPQISLLDLYFRERKSQAATTIDGHATQSQKSCGL 136

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           +   I  IPD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D   
Sbjct: 137 AVQDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADF-- 194

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
                                  S T L  L   +NLL  +PETI  L++L RLDL  N 
Sbjct: 195 ----------------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 232

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L
Sbjct: 233 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 292

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           + LDL+ N L  LP  I K++ L  L L  N L+ L  +L N      L      L EN 
Sbjct: 293 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELI-----LTENF 347

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            SE   +    I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPP
Sbjct: 348 LSELPAS----IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPP 399

Query: 398 ELSSCASLQTLILSRNKIKDWPDAIL 423
           EL +C  L  L +S N++   P +++
Sbjct: 400 ELGNCTVLHVLDVSGNQLLYLPYSLV 425



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 200 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 259

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 260 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 319

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 320 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 378

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 379 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 437



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 212/467 (45%), Gaps = 50/467 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +P   G    ++ +D    S+ ++P+EI   +  L +    +N +++LP +  R   L  
Sbjct: 5   IPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRK 64

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
              S+N I  LP D+ +   + +LDV  N  T            L+ L + +  L     
Sbjct: 65  LGLSDNEIGRLPPDIQNFENLVELDVSRNART------------LSILFSPQISL----- 107

Query: 202 TIGSLSRLIRLDLH-QNRILSIPSSISGCCSLAEFYMG--NNALSALPAELGKLSKLGTL 258
                     LDL+ + R     ++I G  + ++   G     +  +P ++  L  L   
Sbjct: 108 ----------LDLYFRERKSQAATTIDGHATQSQKSCGLAVQDIPDIPDDIKHLQSLQVA 157

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           D  SN + +      QL+ L++L L++ SL+ LP + G +T L  L L  N L+ L  ++
Sbjct: 158 DFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETI 217

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  L K  R  L +NE        EDL      L     EL L+   L  +P E+ 
Sbjct: 218 SQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWLDHNQLQRLPPELG 264

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I   LS L+ LKLD N
Sbjct: 265 LLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-AKLSRLTILKLDQN 323

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L+++ +D   +   +Q L L+ N  S LP +     +  L  L + R  L   P +I +
Sbjct: 324 RLQRL-NDTLGNCDNMQELILTENFLSELPAS--IGRMTKLSNLNVDRNALEYLPLEIGQ 380

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L +L L  N L+ +P    N T L  LD+S N +  LP  LV++
Sbjct: 381 CANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL 427



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 272 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLETLPDGIAKLSRLTIL 318

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 319 KLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 378

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 379 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 436

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 437 -NQSQPLLTFQPDT 449


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 205/444 (46%), Gaps = 68/444 (15%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L+ N++  +P  I    +L       N L+  P E+G+
Sbjct: 156 --------PEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L+L  N+L     E  QL+ L +LDL +N L+ LP EIG++  L++L L G  L
Sbjct: 208 LQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 368
           +TL   ++       L+ LR           +     L  +   +   SK  +L L G  
Sbjct: 268 KTLPQGIIQ------LQNLRG---------LNLNYTHLTILPKEIGQLSKLQKLYLYGNQ 312

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +  ++ +L L  N ++ LP E+     LQTL L  N+I  +P  I   L +
Sbjct: 313 LTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI-GQLQN 371

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L  N L  +P +                            L +LQEL L   QL 
Sbjct: 372 LQELNLGFNQLTTLPQE-------------------------IGQLQNLQELNLEFNQLA 406

Query: 489 EAPTDILRLQQLRILDLSQNSLQS 512
             P ++ +LQ+LR L+L  N + S
Sbjct: 407 TLPKEVGQLQKLRKLNLYNNPIAS 430



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 188/396 (47%), Gaps = 41/396 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL     + N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + +GN+LT                          P+ IG L +L  L+L  NR+ ++   
Sbjct: 192 NSQGNQLTT------------------------FPKEIGQLQKLQELNLGFNRLTTLREE 227

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L    + +N L+ LP E+G+L KL  L+L+  QLK       QL+ L  L+L+ 
Sbjct: 228 VVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNY 287

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
             L+ LP EIG+++ L+KL L GN L TL   +        LK L+   L  N       
Sbjct: 288 THLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQLKKLQELYLGNNPLRTLPK 341

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L LEG  ++  P EI +   + +L+L  N +  LP E+    
Sbjct: 342 EIEQLQKLQT--------LYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 393

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +LQ L L  N++   P  +   L  L  L L NNP+
Sbjct: 394 NLQELNLEFNQLATLPKEV-GQLQKLRKLNLYNNPI 428



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 186/423 (43%), Gaps = 64/423 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S ++L  L   +G+  NL     + N +T+LP ++     +  LD+  N+LT+L   
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L    N L  +P+ +G L  L  L+L  N++  +P  I    +L    + 
Sbjct: 113 -IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLN 171

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N L+ LP ++G+L  L  L+   NQL  +  E  QL +L  L+L  N L+ L  E+ ++
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQL 231

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  NPL TL   +  G    L                                
Sbjct: 232 QNLQILDLISNPLTTLPKEI--GQLQKL-------------------------------- 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             +EL+L G+ L  +P  I +   +  L+L+   +  LP E+   + LQ L L  N++  
Sbjct: 258 --QELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTT 315

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P+ I   L  L  L L NNPLR +P    K+I  LQ                      L
Sbjct: 316 LPEEI-GQLKKLQELYLGNNPLRTLP----KEIEQLQ---------------------KL 349

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           Q LYL   Q+   P +I +LQ L+ L+L  N L ++P+    L +L EL+L  N ++ LP
Sbjct: 350 QTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLP 409

Query: 538 PEL 540
            E+
Sbjct: 410 KEV 412



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++  +   LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++
Sbjct: 318 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNL 377

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
            FN +  +P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 378 GFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L    L+ +P+EI +   +  LDL  N +  LP E+    +LQ L L  N++   P
Sbjct: 74  QKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILP 133

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQILD 457
           D +   L +L  L LD N L  +P                       +    +  LQIL+
Sbjct: 134 DEV-GQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILN 192

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
              N + + P+      L  LQEL L   +L     ++++LQ L+ILDL  N L ++P+ 
Sbjct: 193 SQGNQLTTFPKE--IGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKE 250

Query: 517 FKNLTSLTELDLSDNNISALPPELVSV 543
              L  L EL+L    +  LP  ++ +
Sbjct: 251 IGQLQKLQELNLYGIQLKTLPQGIIQL 277


>gi|440804073|gb|ELR24954.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 827

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 210/471 (44%), Gaps = 83/471 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S++ S R L  VP +V             W++ D   L +  N +E +  D+ +L  LT 
Sbjct: 370 SVDYSRRQLTSVPPQV-------------WQSTDATILNMYMNKLESIPPDIGHLKGLTA 416

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N L +LP  IG L  L+ LD+ +N +  +P  I   T L K     N+L ELP  
Sbjct: 417 LGLNENNLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVELPEE 476

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L      NN +TSLP  L   + +  LDV  NKL  L+ NL +    L EL   
Sbjct: 477 IGSLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNL-SPLIFLKELDCK 535

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N+L+ +P    +LS L R+DL  N+    P +++   SLAE  M  N L++L  ++G+L
Sbjct: 536 QNMLSVLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSL-VDIGQL 594

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           + L  L L+SN+                      L  LPP +GK+ +L+ L L  N L  
Sbjct: 595 TALERLYLNSNR----------------------LVTLPPSMGKLRSLKYLQLRANQL-- 630

Query: 313 LRSSLVNGPTPAL--LKYLRSRLPENEDSEASTTKEDLITMATRLSVTS----------- 359
             +SL  G +  +  L+   + L  N  SE    +  L++    LS+T            
Sbjct: 631 --TSLPEGTSCVMAGLELREADLSSNNFSEMP--EAILVSTLQNLSITDNVMTKLPPTIT 686

Query: 360 -----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                K  +LEG  L ++   +     +  L L  N I  +P E+S  +SLQ L L  N+
Sbjct: 687 RLQSLKTCNLEGNQLESLDPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHNR 746

Query: 415 IKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVP 443
           ++  P  I                      L  L  L+ LK+D NP++ +P
Sbjct: 747 LESLPQTIGGMLALSLLVLNDNLLDDLPNELVLLDKLTELKVDGNPMKNIP 797



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 190/429 (44%), Gaps = 54/429 (12%)

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           S+D S   +  +P ++  +T     +   N+L+ +P  +G    L+    + N +  LP 
Sbjct: 370 SVDYSRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLKGLTALGLNENNLKKLPP 429

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           ++ + +++  LD+  NKL  +  N I   T L++L    N L  +PE IGSL  L  L +
Sbjct: 430 EIGNLTRLRILDLRYNKLRTVPAN-IKHLTQLSKLFLRFNRLVELPEEIGSLQSLEILSV 488

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N++ S+P S+    +L    +  N L  L   L  L  L  LD   N L         
Sbjct: 489 RNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNLSPLIFLKELDCKQNMLSVLPTGWST 548

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLK-YLRS 331
           L  L+ +DLS+N  +  PP + ++ +L +L + GN L    +SLV+ G   AL + YL S
Sbjct: 549 LSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQL----TSLVDIGQLTALERLYLNS 604

Query: 332 RLPENEDSEASTTKEDLITMATRLSV--TSKELSLEGMNLSAIP---SEIWEAGEITKLD 386
                           L+T+   +    + K L L    L+++P   S +    E+ + D
Sbjct: 605 --------------NRLVTLPPSMGKLRSLKYLQLRANQLTSLPEGTSCVMAGLELREAD 650

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           LS N+  E+P E    ++LQ L ++ N +   P  I T L SL    L+ N L  +    
Sbjct: 651 LSSNNFSEMP-EAILVSTLQNLSITDNVMTKLPPTI-TRLQSLKTCNLEGNQLESL---- 704

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                                +P  + L +L  L L   ++   P ++ R+  L+ LDL 
Sbjct: 705 ---------------------DPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLE 743

Query: 507 QNSLQSIPE 515
            N L+S+P+
Sbjct: 744 HNRLESLPQ 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 28/199 (14%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+++P ++W++ + T L++  N ++ +PP++     L  L L+ N +K  P  I  +L+ 
Sbjct: 378 LTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLKGLTALGLNENNLKKLPPEI-GNLTR 436

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  N LR VP++  K +  L  L L +N +  LPE     SL  L+ L +R  QL
Sbjct: 437 LRILDLRYNKLRTVPAN-IKHLTQLSKLFLRFNRLVELPEE--IGSLQSLEILSVRNNQL 493

Query: 488 REAPTDILRLQQLRILDLSQNSLQ-----------------------SIPEGFKNLTSLT 524
              P  +     L++LD+S N LQ                        +P G+  L++LT
Sbjct: 494 TSLPRSLDLATNLKVLDVSTNKLQFLNCNLSPLIFLKELDCKQNMLSVLPTGWSTLSNLT 553

Query: 525 ELDLSDNNISALPPELVSV 543
            +DLS N  +  PP L  +
Sbjct: 554 RVDLSHNQFAQFPPALAEL 572



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 2/164 (1%)

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N  SE+P AI  +  L++L ++ N + K+P  I    +L   +   NQL+ L   +
Sbjct: 650 DLSSNNFSEMPEAI-LVSTLQNLSITDNVMTKLPPTITRLQSLKTCNLEGNQLESLDPGV 708

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL   +   N I+++P++++  S + +LD+E N+L  L   +     +   ++   
Sbjct: 709 ALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHNRLESLPQTIGGMLALSLLVLNDN 768

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            L +   E +  L +L  L +  N + +IP +  G  ++  F +
Sbjct: 769 LLDDLPNELV-LLDKLTELKVDGNPMKNIPDADQGGNAVFHFLL 811


>gi|340375357|ref|XP_003386202.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Amphimedon
           queenslandica]
          Length = 635

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 222/472 (47%), Gaps = 65/472 (13%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S + ++ LP  I E+  ++ L +  N +  +P E+G+   L K   + N L +LP+
Sbjct: 157 ILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPN 216

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L +C++LS     +N +  +P  + + + +  L +  NK+ V  N  I +   LT LI 
Sbjct: 217 ELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKI-VSVNPAIGNLRNLTSLIL 275

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N +  +P TIGSL+RL  LD+  N + S+P  I+ C  L+   + +N L+ LP  +G 
Sbjct: 276 RENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGN 335

Query: 252 LSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNP 309
           L  L  L L  NQL E     C    L+ + L +N+L+ LP ++ G +T +  + L+   
Sbjct: 336 LKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLS--- 392

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
               R+S  + P                           I+  + L V+   L +E  ++
Sbjct: 393 ----RNSFTSFP---------------------------ISDPSHL-VSVNSLMIEHNHI 420

Query: 370 SAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           + +P  I+ +A E+T+L L  N I  LP +  +  +L  L L  N++   P+ I   L+ 
Sbjct: 421 TKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIPEEI-QELTR 479

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L NN +R +P                            S+L +L+EL L   +L 
Sbjct: 480 LEILVLANNTIRTLPKG-------------------------ISALRNLKELDLEGNKLE 514

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              T+I  L++L  L++  N + ++P G   L +L  L   +NN+  +P E+
Sbjct: 515 YLATEISYLRELTKLNVQSNRITNLPRGLGLLVNLKHLSAGENNLLEIPAEI 566



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 201/436 (46%), Gaps = 42/436 (9%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK   +   L+L +  LR+VP  V              E   LQ L L  N I  +   +
Sbjct: 218 LKQCVSLSVLDLRHNKLREVPPVV-------------CELASLQTLYLRFNKIVSVNPAI 264

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  LT L +  NK+ +LP+ IG L  L +LDVS N +  +PDEI + + L       N
Sbjct: 265 GNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHN 324

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ELP ++G   +L       N ++ LP  L  C++++++ +E N LT L + L  S T
Sbjct: 325 DLTELPVAIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVT 384

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNN 240
            ++ +  S+N     P  I   S L+ ++   +  N I  +P  I S    L +  + +N
Sbjct: 385 KMSNIQLSRNSFTSFP--ISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDN 442

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            ++ LP + G    L  L+L +NQL     E  +L RL +L L+NN++  LP  I  +  
Sbjct: 443 QITTLPLDFGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALRN 502

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L GN L  L +          + YLR     N  S   T     +     L V  
Sbjct: 503 LKELDLEGNKLEYLATE---------ISYLRELTKLNVQSNRITN----LPRGLGLLVNL 549

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA-----SLQTLILSR- 412
           K LS    NL  IP+EI     + +L L+ N ++Q LP EL+ C      S++   LSR 
Sbjct: 550 KHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFLPYELALCKRLALMSVEGCPLSRL 609

Query: 413 --NKIKDWPDAILTSL 426
             + +   P AI+  L
Sbjct: 610 PPHVVDGGPSAIIQHL 625



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 195/406 (48%), Gaps = 39/406 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  L  +L+    L+VL++ HNKL E+P  + EL  L++L + FN I+ +
Sbjct: 201 LRKLALNENMLTDLPNELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSV 260

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
              IG+   L       N++++LPS++G    L+    S+N + SLP+++A+CS++S L 
Sbjct: 261 NPAIGNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQ 320

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N LT L                        P  IG+L  L RL L  N++  +P S+
Sbjct: 321 LQHNDLTEL------------------------PVAIGNLKSLKRLGLQYNQLSELPPSL 356

Query: 227 SGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLS 283
             C  L E  + +N L++LP +L G ++K+  + L  N    + +      +SV  L + 
Sbjct: 357 CSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFTSFPISDPSHLVSVNSLMIE 416

Query: 284 NNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           +N ++ +P  I  + T L +L L  N + TL        T   L    ++L    +    
Sbjct: 417 HNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIPEEIQE 476

Query: 343 TTKEDLITMATRLSVT----------SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            T+ +++ +A     T           KEL LEG  L  + +EI    E+TKL++  N I
Sbjct: 477 LTRLEILVLANNTIRTLPKGISALRNLKELDLEGNKLEYLATEISYLRELTKLNVQSNRI 536

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             LP  L    +L+ L    N + + P  I T L +L  L L++NP
Sbjct: 537 TNLPRGLGLLVNLKHLSAGENNLLEIPAEIGT-LENLEELYLNDNP 581



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 173/371 (46%), Gaps = 46/371 (12%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           I LDL ++ I  +P +I     + E Y+  N +S LP E+G L KL  L L+ N L +  
Sbjct: 156 IILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLP 215

Query: 270 VEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALL 326
            E  Q + LSVLDL +N L  +PP + ++ +L+ L L  N + ++  ++ N    T  +L
Sbjct: 216 NELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLIL 275

Query: 327 KYLRSR-LPENEDSEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIPS 374
           +  + R LP    S    T  D+           I   ++LS     L L+  +L+ +P 
Sbjct: 276 RENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSF----LQLQHNDLTELPV 331

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            I     + +L L  N + ELPP L SC  L  + L  N +   PD +  S++ +S ++L
Sbjct: 332 AIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQL 391

Query: 435 ------------------------DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
                                   ++N + +VP   F     L  L L  N I +LP + 
Sbjct: 392 SRNSFTSFPISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLD- 450

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
            F +   L EL L   QL   P +I  L +L IL L+ N+++++P+G   L +L ELDL 
Sbjct: 451 -FGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALRNLKELDLE 509

Query: 530 DNNISALPPEL 540
            N +  L  E+
Sbjct: 510 GNKLEYLATEI 520



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 26/181 (14%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L   +++ +P  I E   I +L L  N +  LPPE+ +   L+ L L+ N + D P+ 
Sbjct: 158 LDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPNE 217

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
            L    SLS L L +N LR+VP                         P    L  LQ LY
Sbjct: 218 -LKQCVSLSVLDLRHNKLREVP-------------------------PVVCELASLQTLY 251

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           LR  ++      I  L+ L  L L +N ++ +P    +LT LT LD+S N++ +LP E+ 
Sbjct: 252 LRFNKIVSVNPAIGNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIA 311

Query: 542 S 542
           +
Sbjct: 312 N 312


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P+EI +   + +L LS N ++ L  E+    +L+ L L  N++K  P  I
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 38/357 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR             
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR------------- 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                            EL L    L  + +EI +   + KL L  N ++ LP E+ 
Sbjct: 326 -----------------ELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 166/351 (47%), Gaps = 42/351 (11%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+  L  +P+ IG L  L  L+L+ N++ ++P  I    +L E ++  N L+  P E+G+
Sbjct: 54  SEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQ 113

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  N+L     E  QL+ L  L L+ N  +  P EIG++  L++L L  N L
Sbjct: 114 LKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQL 173

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL + +        L+ LR                              EL L    L 
Sbjct: 174 KTLPNEI------GQLQNLR------------------------------ELHLSYNQLK 197

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            + +EI +   +  LDL+ N ++ LP E+    +LQ L L+ N+ K  P+ I   L +L 
Sbjct: 198 TLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQ 256

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L  N  + VP +    +  LQ+L L+ N   ++PE      L +LQ L L   QL  
Sbjct: 257 VLDLGYNQFKTVPEE-IGQLKNLQMLFLNNNQFKTVPEET--GQLKNLQMLSLNANQLTT 313

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L+ LR L LS N L+++      L +L +L L DN +  LP E+
Sbjct: 314 LPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 48/362 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+++     +  L++  N+L  L    I     L EL  S N
Sbjct: 49  RVLDLSEQK-----LKTLPKEIGQLQNLQVLELNNNQLATLPKE-IGQLQNLQELHLSGN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG L  L  L L +NR+ ++P  I    +L E Y+  N  +A P E+G+L  
Sbjct: 103 QLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++  L+ L L  N L+TL
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +        LK L+                               L L       +P
Sbjct: 223 PKEI------GQLKNLQM------------------------------LDLNNNQFKTVP 246

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  LDL  N  + +P E+    +LQ L L+ N+ K  P+     L +L  L 
Sbjct: 247 EEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET-GQLKNLQMLS 305

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L+ N L  +P++  + +  L+ L LSYN + +L  +     L +L++L LR  QL+  P 
Sbjct: 306 LNANQLTTLPNE-IRQLKNLRELHLSYNQLKTL--SAEIGQLKNLKKLSLRDNQLKTLPK 362

Query: 493 DI 494
           +I
Sbjct: 363 EI 364



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            N L  +   IG L  L +L L  N++ ++P  I 
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 168/343 (48%), Gaps = 38/343 (11%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           ++LD+SF  +  +P +I   T L   D  +N+L  LP  +G+   L+    ++N +++LP
Sbjct: 19  ETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALP 78

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            ++   + +S+L +  NKLT L    I   T L+EL  S N L  +P T+  L  + RL 
Sbjct: 79  PEIGQLNNLSRLHLSYNKLTNLPEE-IGQLTHLSELYLSHNFLETLPTTLNHLVNINRLS 137

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N+  S+P  I G  SL+ + + NN L+ LP E+G+L  L  LDL  NQL     E  
Sbjct: 138 LSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIG 197

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L RL+ LD+S N L  LPPEI  +  L  L L+ N L TL         P  + +L   
Sbjct: 198 ELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATL---------PPEIGFL--- 245

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                         +LI+           L+L    L++IP EI +  ++ +  LS N I
Sbjct: 246 -------------SNLIS-----------LNLSYNQLTSIPPEIGQLTKLIQFRLSHNKI 281

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           + LPPE+     L +L+L  N++   P  ++  +      +LD
Sbjct: 282 ETLPPEIRCLTQLTSLMLKNNQLLALPLELIQLVQFFKLTQLD 324



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 145/277 (52%), Gaps = 2/277 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L+ L L +N +  L   +  L  LT LN++ N+LS LP  IG+L+ L  L +S+N 
Sbjct: 37  QLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNK 96

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+EIG  T L +   S N L+ LP++L   +N++    S N  TSLP  +     +
Sbjct: 97  LTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISL 156

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S  D+  N+LT L    I     L +L    N L  +P  IG L RL  LD+  N+++S+
Sbjct: 157 SWWDLNNNQLTTLPPE-IGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISL 215

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I    +L    + NN L+ LP E+G LS L +L+L  NQL     E  QL +L    
Sbjct: 216 PPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFR 275

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           LS+N +  LPPEI  +T L  L+L  N L  L   L+
Sbjct: 276 LSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELI 312



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 19/286 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL++  L  +P E+       G+ +      +L +L L++N +  L E++  L  L+ 
Sbjct: 66  SLNLTDNQLSALPPEI-------GQLN------NLSRLHLSYNKLTNLPEEIGQLTHLSE 112

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +SHN L  LP  +  L  +  L +S+N    +P +I    +L  +D ++NQL  LP  
Sbjct: 113 LYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPE 172

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L+      N +T+LP ++ +  +++ LDV  N+L  L    I     L  L  S
Sbjct: 173 IGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPE-IQFLINLDSLTLS 231

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG LS LI L+L  N++ SIP  I     L +F + +N +  LP E+  L
Sbjct: 232 NNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCL 291

Query: 253 SKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEI 294
           ++L +L L +NQL    +E  QL    +L+ LD+  N L+ +PPEI
Sbjct: 292 TQLTSLMLKNNQLLALPLELIQLVQFFKLTQLDVQENLLT-IPPEI 336



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 42/334 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL   ++ ++P  I     L    + NN L+ LP ++GKL KL +L+L  NQL     E
Sbjct: 21  LDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPE 80

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL  LS L LS N L+ LP EIG++T L +L L+ N L TL ++L +     L+   R
Sbjct: 81  IGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNH-----LVNINR 135

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N+ +      + LI+++           L    L+ +P EI +   + +LDL  N
Sbjct: 136 LSLSYNQFTSLPPQIKGLISLSW--------WDLNNNQLTTLPPEIGQLKSLNQLDLGYN 187

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 449
            +  LPPE+     L +L +S N++   P  I   L +L  L L NN L  +P + GF  
Sbjct: 188 QLTTLPPEIGELYRLTSLDVSYNQLISLPPEI-QFLINLDSLTLSNNQLATLPPEIGF-- 244

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L  L+LSYN                        QL   P +I +L +L    LS N 
Sbjct: 245 LSNLISLNLSYN------------------------QLTSIPPEIGQLTKLIQFRLSHNK 280

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           ++++P   + LT LT L L +N + ALP EL+ +
Sbjct: 281 IETLPPEIRCLTQLTSLMLKNNQLLALPLELIQL 314



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 7/173 (4%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  I   I E  E   LDLS   ++ LPP++     L+ L L  NK+   P  I   L  
Sbjct: 7   LQIIQQAIEEKAE--TLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQI-GKLKK 63

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L+ L L +N L  +P +    +  L  L LSYN + +LPE      L HL ELYL    L
Sbjct: 64  LTSLNLTDNQLSALPPE-IGQLNNLSRLHLSYNKLTNLPEE--IGQLTHLSELYLSHNFL 120

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              PT +  L  +  L LS N   S+P   K L SL+  DL++N ++ LPPE+
Sbjct: 121 ETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEI 173


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 207/415 (49%), Gaps = 31/415 (7%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N+I ++ E++  L  L  L +S N+L+++P  IG +  L+ LDVS NS+  +P EIG
Sbjct: 126 LDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKEIG 185

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L + D S N++KE+PS +     L    A  N +T+ P D+     + +L++  N 
Sbjct: 186 NIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLRELNLFNNM 245

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +T L +N I S+  L  L   +N L  +PE+IG L +L  L ++ N ++++P +I     
Sbjct: 246 ITELPDN-IGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSK 304

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-----CVEACQLRLSVLDLSNNS 286
           L E  + NN L  LP  +G+L+ +  L+L +N +K +      V+   + +S  ++ N  
Sbjct: 305 LTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYISNNNIINFE 364

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +  LP  +  +   R LL +              P    +K+L     + E+ +      
Sbjct: 365 IDFLPTSVQYIDLSRNLLTS-------------VPIIENIKHLDLSFNKIENIQEGIKSM 411

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + I+           L L G  +  +P  I +   +T ++LS N + E+P E  +  +LQ
Sbjct: 412 NSISY----------LGLNGNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQ 461

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            L LS N++ + P+  L S+++L  L LDNN L  +P +    I  L+ +DLS N
Sbjct: 462 GLYLSNNELLEIPNT-LGSITALRFLSLDNNRLTIIPKE-IGTIEKLKKVDLSNN 514



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 225/482 (46%), Gaps = 48/482 (9%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           +IE  K  LR L  +  L     K+  L   I  L  L  +++  N I +IP+EI    +
Sbjct: 85  DIESNKITLRKLQSIKYLLAMEEKIESL-QGISYLPNLLEMNLDGNHINEIPEEIVKLES 143

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L K   S N+L ++P+ +G    L     S N +TSLP+++ +   + +LD+  NK+  +
Sbjct: 144 LDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKEIGNIITLDRLDISQNKIKEI 203

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            +  I +   L  L+A +N L   P  I  L  L  L+L  N I  +P +I     L   
Sbjct: 204 PSE-INNLKKLIRLLAYENELTTFPSDIVGLPVLRELNLFNNMITELPDNIGSFPELMYL 262

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
            +G N L++LP  +G+L KL TL +++N+L         L +L+ ++LSNN L  LP  I
Sbjct: 263 RIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSKLTEINLSNNKLERLPDNI 322

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++T++++L L  N ++           P L   +  +     ++     + D +  + +
Sbjct: 323 GRLTSVKELNLDNNNIKIF---------PDLSNLVDLKTIYISNNNIINFEIDFLPTSVQ 373

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
               S+ L      L+++P  I E   I  LDLS N I+ +   + S  S+  L L+ N 
Sbjct: 374 YIDLSRNL------LTSVP--IIE--NIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNL 423

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           IK  P  I   + +L+ + L NN L ++PS+                         F +L
Sbjct: 424 IKTLPKTI-GDMITLTGINLSNNKLVEIPSE-------------------------FGNL 457

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQ LYL   +L E P  +  +  LR L L  N L  IP+    +  L ++DLS+N ++
Sbjct: 458 VNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIGTIEKLKKVDLSNNYLT 517

Query: 535 AL 536
            L
Sbjct: 518 KL 519



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 17/287 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N I +L +++ + P L  L +  NKL+ LP +IGEL  L +L V+ N ++ +
Sbjct: 236 LRELNLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINL 295

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE--DLADCSKMSK 164
           PD I + + L + + S+N+L+ LP ++GR  ++ +    NN I   P+  +L D   +  
Sbjct: 296 PDNIINLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYI 355

Query: 165 LDVEGNKLTV-----------LSNNLIASWTML---TELIASKNLLNGMPETIGSLSRLI 210
            +       +           LS NL+ S  ++     L  S N +  + E I S++ + 
Sbjct: 356 SNNNIINFEIDFLPTSVQYIDLSRNLLTSVPIIENIKHLDLSFNKIENIQEGIKSMNSIS 415

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L L+ N I ++P +I    +L    + NN L  +P+E G L  L  L L +N+L E   
Sbjct: 416 YLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPN 475

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
               +  L  L L NN L+ +P EIG +  L+K+ L+ N L  L  S
Sbjct: 476 TLGSITALRFLSLDNNRLTIIPKEIGTIEKLKKVDLSNNYLTKLEFS 522



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 168/376 (44%), Gaps = 36/376 (9%)

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+E NK+T+     I     + E I S   L G    I  L  L+ ++L  N I  IP  
Sbjct: 85  DIESNKITLRKLQSIKYLLAMEEKIES---LQG----ISYLPNLLEMNLDGNHINEIPEE 137

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    SL +  +  N L+ +P  +G + KL  LD+  N L     E   +  L  LD+S 
Sbjct: 138 IVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKEIGNIITLDRLDISQ 197

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N +  +P EI  +  L +LL   N L T  S +V  P    L    + + E  D+  S  
Sbjct: 198 NKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLRELNLFNNMITELPDNIGSFP 257

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           +     M  R+             L+++P  I E  ++  L ++ N +  LP  + + + 
Sbjct: 258 E----LMYLRIGENK---------LTSLPESIGELEKLFTLSVNNNELINLPDNIINLSK 304

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  + LS NK++  PD I   L+S+  L LDNN ++  P        +  ++DL     S
Sbjct: 305 LTEINLSNNKLERLPDNI-GRLTSVKELNLDNNNIKIFPD-------LSNLVDLKTIYIS 356

Query: 465 LPENPPFS--SLP-HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
                 F    LP  +Q + L R  L   P     ++ ++ LDLS N +++I EG K++ 
Sbjct: 357 NNNIINFEIDFLPTSVQYIDLSRNLLTSVPI----IENIKHLDLSFNKIENIQEGIKSMN 412

Query: 522 SLTELDLSDNNISALP 537
           S++ L L+ N I  LP
Sbjct: 413 SISYLGLNGNLIKTLP 428



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 76/130 (58%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +++ L L+ N IE ++E ++++  ++ L ++ N +  LP  IG++  L  +++S N +++
Sbjct: 390 NIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVE 449

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E G+   L     S+N+L E+P++LG    L      NN +T +P+++    K+ K+
Sbjct: 450 IPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIGTIEKLKKV 509

Query: 166 DVEGNKLTVL 175
           D+  N LT L
Sbjct: 510 DLSNNYLTKL 519



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 97/183 (53%), Gaps = 3/183 (1%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           E++L+G +++ IP EI +   + KL LSRN + ++P  + +   L+ L +S+N +   P 
Sbjct: 123 EMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPK 182

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            I  ++ +L  L +  N ++++PS+      ++++L     + + P +     LP L+EL
Sbjct: 183 EI-GNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSD--IVGLPVLREL 239

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L    + E P +I    +L  L + +N L S+PE    L  L  L +++N +  LP  +
Sbjct: 240 NLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNI 299

Query: 541 VSV 543
           +++
Sbjct: 300 INL 302



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           G   +P L  ++L  N I  +PE      L  L +L L R +L + PT I  +++LR LD
Sbjct: 114 GISYLPNLLEMNLDGNHINEIPE--EIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLD 171

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +S+NSL S+P+   N+ +L  LD+S N I  +P E+
Sbjct: 172 VSKNSLTSLPKEIGNIITLDRLDISQNKIKEIPSEI 207



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
            S LP+L E+ L    + E P +I++L+ L  L LS+N L  +P     +  L  LD+S 
Sbjct: 115 ISYLPNLLEMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSK 174

Query: 531 NNISALPPELVSV 543
           N++++LP E+ ++
Sbjct: 175 NSLTSLPKEIGNI 187



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + + L  + L++N + ++  +  NL  L  L +S+N+L E+P  +G +  L+ L +  N 
Sbjct: 433 DMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNR 492

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +  IP EIG+   L K D S+N L +L  S
Sbjct: 493 LTIIPKEIGTIEKLKKVDLSNNYLTKLEFS 522


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 205/444 (46%), Gaps = 68/444 (15%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L+ N++  +P  I    +L       N L+  P E+G+
Sbjct: 156 --------PEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L+L  N+L     E  QL+ L +LDL +N L+ LP EIG++  L++L L G  L
Sbjct: 208 LQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 368
           +TL   ++       L+ LR           +     L  +   +   SK  +L L G  
Sbjct: 268 KTLPQGIIQ------LQNLRG---------LNLNYTHLTILPKEIGQLSKLQKLYLYGNQ 312

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +  ++ +L L  N ++ LP E+     LQTL L  N+I  +P  I   L +
Sbjct: 313 LTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI-GQLKN 371

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L  N L  +P +                            L +LQEL L   QL 
Sbjct: 372 LQELNLGFNQLTTLPQE-------------------------IGQLQNLQELNLEFNQLA 406

Query: 489 EAPTDILRLQQLRILDLSQNSLQS 512
             P ++ +LQ+LR L+L  N + S
Sbjct: 407 TLPKEVGQLQKLRKLNLYNNPIAS 430



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 188/396 (47%), Gaps = 41/396 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL     + N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + +GN+LT                          P+ IG L +L  L+L  NR+ ++   
Sbjct: 192 NSQGNQLTT------------------------FPKEIGQLQKLQELNLGFNRLTTLREE 227

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L    + +N L+ LP E+G+L KL  L+L+  QLK       QL+ L  L+L+ 
Sbjct: 228 VVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNY 287

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
             L+ LP EIG+++ L+KL L GN L TL   +        LK L+   L  N       
Sbjct: 288 THLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQLKKLQELYLGNNPLRTLPK 341

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L LEG  ++  P EI +   + +L+L  N +  LP E+    
Sbjct: 342 EIEQLQKLQT--------LYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQ 393

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +LQ L L  N++   P  +   L  L  L L NNP+
Sbjct: 394 NLQELNLEFNQLATLPKEV-GQLQKLRKLNLYNNPI 428



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 186/423 (43%), Gaps = 64/423 (15%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S ++L  L   +G+  NL     + N +T+LP ++     +  LD+  N+LT+L   
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L    N L  +P+ +G L  L  L+L  N++  +P  I    +L    + 
Sbjct: 113 -IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLN 171

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N L+ LP ++G+L  L  L+   NQL  +  E  QL +L  L+L  N L+ L  E+ ++
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQL 231

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  NPL TL   +  G    L                                
Sbjct: 232 QNLQILDLISNPLTTLPKEI--GQLQKL-------------------------------- 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             +EL+L G+ L  +P  I +   +  L+L+   +  LP E+   + LQ L L  N++  
Sbjct: 258 --QELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTT 315

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
            P+ I   L  L  L L NNPLR +P    K+I  LQ                      L
Sbjct: 316 LPEEI-GQLKKLQELYLGNNPLRTLP----KEIEQLQ---------------------KL 349

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           Q LYL   Q+   P +I +L+ L+ L+L  N L ++P+    L +L EL+L  N ++ LP
Sbjct: 350 QTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLP 409

Query: 538 PEL 540
            E+
Sbjct: 410 KEV 412



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++  +   LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++
Sbjct: 318 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNL 377

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
            FN +  +P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 378 GFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L    L+ +P+EI +   +  LDL  N +  LP E+    +LQ L L  N++   P
Sbjct: 74  QKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILP 133

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQILD 457
           D +   L +L  L LD N L  +P                       +    +  LQIL+
Sbjct: 134 DEV-GQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILN 192

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
              N + + P+      L  LQEL L   +L     ++++LQ L+ILDL  N L ++P+ 
Sbjct: 193 SQGNQLTTFPKE--IGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKE 250

Query: 517 FKNLTSLTELDLSDNNISALPPELVSV 543
              L  L EL+L    +  LP  ++ +
Sbjct: 251 IGQLQKLQELNLYGIQLKTLPQGIIQL 277


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 153/277 (55%), Gaps = 2/277 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L+ N I ++ E + NL  LT L +  N+++E+P AI  L  L  LD+  N I +
Sbjct: 150 NLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITE 209

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  I + T L + D   NQ+ E+P ++    NL+     +N IT +PE +A+ + + +L
Sbjct: 210 IPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQL 269

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++T +    IA+ T LT+L+ S N +  +PE I +L+ L +LDL  N+I  IP +
Sbjct: 270 DLSYNQITEIP-KAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPET 328

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L E Y   N ++ +   + KL+ L  L L SNQ+ +       L  L+ L L+ 
Sbjct: 329 IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNY 388

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N ++ +   I K+T L +L L GN +  +  +L + P
Sbjct: 389 NKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLP 425



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 214/490 (43%), Gaps = 82/490 (16%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL------------------DVSFNSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL                   VS N++  +P E+    
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLELLGLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       IT +PE                    
Sbjct: 81  NLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPE-------------------- 120

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                IA+ T LT LI   N +   PE I  L+ L +LDL  N+I  IP +I+   +L  
Sbjct: 121 ----AIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTH 176

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             + +N ++ +P  +  L+ L  LDL  NQ+ E       L  L+ LDL +N ++ +P  
Sbjct: 177 LILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKA 236

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I  +T L  L+L  N +  +  ++ N     L   ++  L  N+ +E      +L  +  
Sbjct: 237 IANLTNLTHLILFSNQITEIPEAIAN-----LTNLMQLDLSYNQITEIPKAIANLTNLT- 290

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                  +L L    ++ IP  I     +T+LDLS N I E+P  +++  +L  L  + N
Sbjct: 291 -------QLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYN 343

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           KI    +AI   L++L+ L L +N + Q+P                            ++
Sbjct: 344 KITQIAEAI-AKLTNLTELHLSSNQITQIPE-------------------------AIAN 377

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +L ELYL   ++ +    I +L  L  L L  N +  IPE  ++L  L +LDL  N +
Sbjct: 378 LTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGNPL 437

Query: 534 SALPPELVSV 543
              P  L SV
Sbjct: 438 PISPEILGSV 447



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 185/366 (50%), Gaps = 19/366 (5%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + + L++LIL    I ++ E + NL  LT L +  N+++E P AI +L  L  LD+S N 
Sbjct: 101 QILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQ 160

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I +IP+ I + T L      SNQ+ E+P ++    NL+     +N IT +P+ +A+ + +
Sbjct: 161 ITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNL 220

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD+  N++T +    IA+ T LT LI   N +  +PE I +L+ L++LDL  N+I  I
Sbjct: 221 TQLDLGDNQITEIP-KAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEI 279

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P +I+   +L +  + +N ++ +P  +  L+ L  LDL  N++ E       L  L+ L 
Sbjct: 280 PKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELY 339

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALLKYLRSRLPENEDS 339
            + N ++ +   I K+T L +L L+ N +  +  ++ N    T   L Y           
Sbjct: 340 FNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNY----------- 388

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              T   + I   T L+    EL L+G  ++ IP  +    ++ KLDL  N +   P  L
Sbjct: 389 NKITQIAEAIAKLTNLT----ELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEIL 444

Query: 400 SSCASL 405
            S   +
Sbjct: 445 GSVYEV 450



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 149/275 (54%), Gaps = 4/275 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L  N I ++ + + NL  LT L++  N+++E+P AI  L  L  L +  N I +
Sbjct: 196 NLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITE 255

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I + T L++ D S NQ+ E+P ++    NL+    S+N IT +PE +A+ + +++L
Sbjct: 256 IPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQL 315

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NK+T +    IA+ T LTEL  + N +  + E I  L+ L  L L  N+I  IP +
Sbjct: 316 DLSDNKITEIPET-IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEA 374

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLS 283
           I+   +L E Y+  N ++ +   + KL+ L  L L  NQ+ +   EA +   +L  LDL 
Sbjct: 375 IANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQ-IPEALESLPKLEKLDLR 433

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            N L   P  +G +  +  +    N LR LRS  V
Sbjct: 434 GNPLPISPEILGSVYEVGSVEEIFNYLRLLRSGEV 468



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 193/438 (44%), Gaps = 82/438 (18%)

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDF------------------KASNNCITSLPEDLADC 159
           + D S  +L ELP  +G+   L                     K S N + +LP +L   
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLELLGL 79

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             + KLD+ GN L  + + L+     L ELI  +  +  +PE I +L+ L  L L  N+I
Sbjct: 80  PNLRKLDISGNPLERIPD-LVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQI 138

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
              P +I+   +L +  + +N ++ +P  +  L+ L  L L SNQ+ E       L  L+
Sbjct: 139 TETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLT 198

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            LDL +N ++ +P  I  +T L +L L  N +  +  ++ N                   
Sbjct: 199 QLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIAN------------------- 239

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     +T  T L + S +++        IP  I     + +LDLS N I E+P  
Sbjct: 240 ----------LTNLTHLILFSNQIT-------EIPEAIANLTNLMQLDLSYNQITEIPKA 282

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +++  +L  L+LS NKI + P+AI  +L++L+ L L +N + ++P               
Sbjct: 283 IANLTNLTQLVLSDNKITEIPEAI-ANLTNLTQLDLSDNKITEIPET------------- 328

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
                        ++L +L ELY    ++ +    I +L  L  L LS N +  IPE   
Sbjct: 329 ------------IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIA 376

Query: 519 NLTSLTELDLSDNNISAL 536
           NLT+LTEL L+ N I+ +
Sbjct: 377 NLTNLTELYLNYNKITQI 394



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 220/497 (44%), Gaps = 83/497 (16%)

Query: 4   ILKAARTSG--SLNLSNRSLRDVPNEVYK-------NFDEAGEGDKWWEAVDLQKLILAH 54
           +++ A T G   L+LS + L ++P E+ K          +   G +W     L+K+  + 
Sbjct: 9   LIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKV--SG 66

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHN-----------------------KLSELPAAIGELH 91
           NN++ L  +L  LP L  L++S N                       +++E+P AI  L 
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLT 126

Query: 92  MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
            L  L +  N I + P+ I   T L + D S NQ+ E+P ++    NL+     +N IT 
Sbjct: 127 NLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITE 186

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +PE +A+ + +++LD+  N++T +    IA+ T LT+L    N +  +P+ I +L+ L  
Sbjct: 187 IPEAIANLTNLTQLDLGDNQITEIP-KAIANLTNLTQLDLGDNQITEIPKAIANLTNLTH 245

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  N+I  IP +I+   +L +  +  N ++ +P  +  L+ L  L L  N++ E    
Sbjct: 246 LILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEA 305

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L  L+ LDLS+N ++ +P  I  +T L +L    N +  +  +              
Sbjct: 306 IANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAEA-------------- 351

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                             I   T L+    EL L    ++ IP  I     +T+L L+ N
Sbjct: 352 ------------------IAKLTNLT----ELHLSSNQITQIPEAIANLTNLTELYLNYN 389

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            I ++   ++   +L  L L  N+I   P+A L SL  L  L L  NPL   P       
Sbjct: 390 KITQIAEAIAKLTNLTELHLDGNQITQIPEA-LESLPKLEKLDLRGNPLPISP------- 441

Query: 451 PMLQILDLSYNIASLPE 467
              +IL   Y + S+ E
Sbjct: 442 ---EILGSVYEVGSVEE 455



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 17/314 (5%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   Q+  Y  E    R  +  +S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKQVGGY--EWVGDRY-LKKVSGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMA 352
           +  +  LRKL ++GNPL  +   +        L  +R  + E  ++ A+ T    LI  +
Sbjct: 76  LLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFS 135

Query: 353 TRLSVTSK---------ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            +++ T +         +L L    ++ IP  I     +T L L  N I E+P  +++  
Sbjct: 136 NQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLT 195

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           +L  L L  N+I + P AI  +L++L+ L L +N + ++P        +  ++  S  I 
Sbjct: 196 NLTQLDLGDNQITEIPKAI-ANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQIT 254

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +PE    ++L +L +L L   Q+ E P  I  L  L  L LS N +  IPE   NLT+L
Sbjct: 255 EIPE--AIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNL 312

Query: 524 TELDLSDNNISALP 537
           T+LDLSDN I+ +P
Sbjct: 313 TQLDLSDNKITEIP 326



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 46/237 (19%)

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI-------------------WEAGE-- 381
           T  E LI +    +   +EL L G  L+ +P EI                   W      
Sbjct: 2   TQDELLILIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYL 61

Query: 382 --------------------ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
                               + KLD+S N ++ +P  ++    L+ LIL R +I + P+A
Sbjct: 62  KKVSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEA 121

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I  +L++L+ L L +N + + P +    +  L  LDLS N I  +PE    ++L +L  L
Sbjct: 122 I-ANLTNLTHLILFSNQITETP-EAIAKLTNLTQLDLSDNQITEIPE--AIANLTNLTHL 177

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L   Q+ E P  I  L  L  LDL  N +  IP+   NLT+LT+LDL DN I+ +P
Sbjct: 178 ILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIP 234


>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
           harrisii]
          Length = 582

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+LI L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLVN  +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPMGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N+I    + + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTALPLDYGTWTSMVELNLATNQITKISEDV-SGLVSLEVLILSNNVLKRLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+  LP EL 
Sbjct: 505 LLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 208/433 (48%), Gaps = 52/433 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLAR 340

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  S +  L++  NRI  IP  I S    L++  M +N L+ALP + G 
Sbjct: 341 NCFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGT 400

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +NQ+ +   +   L  L VL LSNN L  LP  +G +  LR+L L  N L
Sbjct: 401 WTSMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKL 460

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + YL+                DL           ++L L    L+
Sbjct: 461 ESL---------PNEIAYLK----------------DL-----------QKLVLTNNQLN 484

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P  I     +T L L  N +  LP E+ +  +L+ L L+ N         L   S LS
Sbjct: 485 NLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLS 544

Query: 431 CLKLDNNPLRQVP 443
            + ++N PL  +P
Sbjct: 545 IMSIENCPLSHLP 557



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 212/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L+      N++K+LP+ +G   NL     ++N +  LP+++  C++++ 
Sbjct: 206 TVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPETIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L  L +L L  N  + Y +       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L  L   L  G   ++++     L  N+ ++
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTAL--PLDYGTWTSMVEL---NLATNQITK 416

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            S     L+++          L L    L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 417 ISEDVSGLVSLEV--------LILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++ + P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLNNLPRGI-GHLTNLTHLGLGENLLAHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP    LP
Sbjct: 524 ----LNDNPNLHGLP 534



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQ+ ++  
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELNLATNQITKISE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N LN +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L  LP EL 
Sbjct: 479 TNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 27/166 (16%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           W   V+L    LA N I K+ ED+  L  L VL +S+N L  LP  +G L  L+ LD+  
Sbjct: 401 WTSMVELN---LATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEE 457

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED----- 155
           N +  +P+EI     L K   ++NQL  LP  +G   NL+      N +  LPE+     
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLE 517

Query: 156 -------------------LADCSKMSKLDVEGNKLTVLSNNLIAS 182
                              LA CSK+S + +E   L+ L   ++A 
Sbjct: 518 NLEELYLNDNPNLHGLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLI 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+     T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPE 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLS 328


>gi|386766575|ref|NP_733155.2| scribbled, isoform P [Drosophila melanogaster]
 gi|383292969|gb|AAN14077.2| scribbled, isoform P [Drosophila melanogaster]
          Length = 1729

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 202/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + ++LR L  LT+L
Sbjct: 222 LDLRHNKLAEIPPVIYR-------------LRTLTTLYLRFNRITAVADNLRQLVNLTML 268

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 269 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 328

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 329 GNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSR 388

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 389 NQFTSYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 447

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG M  LR L L  N 
Sbjct: 448 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENR 507

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 508 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 531

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  I     +T L +S N++Q LP E+ S   L+ L +++N   +     L    +L
Sbjct: 532 TMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLENLYINQNPGLEKLPFELALCQNL 591

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 592 KYLNIDKCPLSTIPPE 607



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 218/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  IP  +     L +    SN++ +LP+ +G  +NL +   + N +TSL
Sbjct: 150 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSL 209

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L +C ++  LD+  NKL  +   +I     LT L    N +  + + +  L  L  L
Sbjct: 210 PESLQNCKQLKVLDLRHNKLAEIP-PVIYRLRTLTTLYLRFNRITAVADNLRQLVNLTML 268

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 269 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 328

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L L  N LS +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 329 GNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGM----TQLPDGMLASLSGLTTI 384

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 385 TLSRNQFTSYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 437

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 438 MLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNM 495

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L +S+N+
Sbjct: 496 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENN 553

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L  L  L ++ N  +  LP EL 
Sbjct: 554 LQFLPEEIGSLEGLENLYINQNPGLEKLPFELA 586



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 46/446 (10%)

Query: 127 KELPSSLGRCLN--LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +++  +L RC +  +     S + IT +P  + +C  +++L +  NK+  L    I    
Sbjct: 136 QDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAE-IGCLV 194

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  ++N L  +PE++ +  +L  LDL  N++  IP  I    +L   Y+  N ++A
Sbjct: 195 NLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITA 254

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +   L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG    L  L
Sbjct: 255 VADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 314

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  +  S+ N     L   +R  L  N  S    T ++  +M         E +
Sbjct: 315 DLQHNELLDIPDSIGN-----LKSLVRLGLRYNRLSSVPATLKNCKSM--------DEFN 361

Query: 364 LEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDA 421
           +EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I   P  
Sbjct: 362 VEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYG 421

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L +L+ L
Sbjct: 422 IFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQNLEIL 478

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------------------GF 517
            L    L++ P  I  +++LRILDL +N ++ +P                          
Sbjct: 479 ILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSI 538

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
            +L++LT L +S+NN+  LP E+ S+
Sbjct: 539 GHLSNLTHLSVSENNLQFLPEEIGSL 564


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 25/299 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L ++ ++ N+I  + E+++ L  L VL++S N L++LP    +L  L  L ++  S+M
Sbjct: 83  VNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLM 142

Query: 105 KIPDEIGSATALVK-----------------------FDCSSNQLKELPSSLGRCLNLSD 141
           ++P +IGS T LV                         D  SN +KELP  +G   +L +
Sbjct: 143 RLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQE 202

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N +  LP ++ +  K++++DV  N+LT + +  I     LT+L  S+N L  +PE
Sbjct: 203 LWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDE-ICGLQNLTDLCLSQNDLEDIPE 261

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IGSL +L  L L QN++  +P  I  C SL E  +  N L  LP+ +G+L  L  L++ 
Sbjct: 262 GIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVD 321

Query: 262 SNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            NQLKE  VE  Q +RL+V+ L +N L  LP E+G +  L  L ++GN L  L  ++ N
Sbjct: 322 RNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITN 380



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N I+ L + +  L  L +L++  N + ELP  IG L  L+ L +  N + 
Sbjct: 152 TNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQ 211

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG+   L + D S NQL  +P  +    NL+D   S N +  +PE +    K+S 
Sbjct: 212 DLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSI 271

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ NKL  L    I +   LTELI ++N L  +P TIG L  L  L++ +N++  IP 
Sbjct: 272 LKLDQNKLGFLPQE-IGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPV 330

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I  C  L    + +N L  LP ELG L +L  LD+  N+L+   +    L L+ L LS 
Sbjct: 331 EIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITNLHLNALWLSE 390

Query: 285 N 285
           N
Sbjct: 391 N 391



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 180/421 (42%), Gaps = 72/421 (17%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D +L+  R+   L L    L+D+P    K F         +  V L+KL L+ N I +L 
Sbjct: 30  DDVLRYTRSLEELLLDANQLKDLP----KGF---------FRLVQLRKLSLSDNEIARLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ NL  L  +++S N + ++P  I  L  L+ LD+S N + K+P+       L     
Sbjct: 77  PEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP  +G   NL   +   N I  LP+ ++   K+  LD+  N +  L   +I 
Sbjct: 137 NDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPE-IIG 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S   L EL    N L  +P  IG+L +L ++D+ +N++  IP  I G  +L +  +  N 
Sbjct: 196 SLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQND 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +G L KL                      S+L L  N L  LP EIG   +L 
Sbjct: 256 LEDIPEGIGSLKKL----------------------SILKLDQNKLGFLPQEIGNCESLT 293

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N                   YL                E+L +   RL + S  
Sbjct: 294 ELILTEN-------------------YL----------------EELPSTIGRLRLLSN- 317

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+++   L  IP EI +   +  + L  N +  LP EL +   L  L +S NK++  P  
Sbjct: 318 LNVDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPIT 377

Query: 422 I 422
           I
Sbjct: 378 I 378



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 194/405 (47%), Gaps = 34/405 (8%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +C+ L  FKA N  +  +  D   CS           LT + ++++     L EL+   N
Sbjct: 3   KCIPL--FKACNRQVDYI--DRRHCS-----------LTDVPDDVLRYTRSLEELLLDAN 47

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+    L +L +L L  N I  +P  ++   +L E  +  N +  +P  +  L  
Sbjct: 48  QLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKN 107

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LD+ SN L +      QLR L+ L L++ SL  LPP+IG +T L  L L  N ++ L
Sbjct: 108 LQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFL 167

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
             S+      +LL  L     E  D  ++  KE    + +  S+  +EL L+   L  +P
Sbjct: 168 PQSM------SLLVKL-----EILDLGSNNIKELPEIIGSLPSL--QELWLDCNELQDLP 214

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI    ++T++D+S N +  +P E+    +L  L LS+N ++D P+ I  SL  LS LK
Sbjct: 215 PEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGI-GSLKKLSILK 273

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           LD N L  +P +   +   L  L L+ N +  LP       L  L  L + R QL+E P 
Sbjct: 274 LDQNKLGFLPQE-IGNCESLTELILTENYLEELPST--IGRLRLLSNLNVDRNQLKEIPV 330

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +I +  +L ++ L  N L  +P+   NL  L  LD+S N +  LP
Sbjct: 331 EIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLP 375



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 41/302 (13%)

Query: 241 ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           +L+ +P ++ + ++ L  L L +NQLK+      +L +L  L LS+N ++ LPPE+  + 
Sbjct: 24  SLTDVPDDVLRYTRSLEELLLDANQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLV 83

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L ++ ++ N +         G  P  +K+L++    +  S   T   +  T    L+  
Sbjct: 84  NLMEMDISRNDI---------GDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLT-- 132

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L L  ++L  +P +I     +  L+L  N IQ LP  +S    L+ L L  N IK+ 
Sbjct: 133 --HLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKEL 190

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P+ I+ SL SL  L LD N L+ +P                         P   +L  L 
Sbjct: 191 PE-IIGSLPSLQELWLDCNELQDLP-------------------------PEIGNLRKLT 224

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           ++ +   QL   P +I  LQ L  L LSQN L+ IPEG  +L  L+ L L  N +  LP 
Sbjct: 225 QIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLPQ 284

Query: 539 EL 540
           E+
Sbjct: 285 EI 286



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 397 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P   +C      I  R+  + D PD +L    SL  L LD N L+ +P  GF  +  L+ 
Sbjct: 6   PLFKACNRQVDYIDRRHCSLTDVPDDVLRYTRSLEELLLDANQLKDLPK-GFFRLVQLRK 64

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L LS N IA LP  P  ++L +L E+ + R  + + P +I  L+ L++LD+S N L  +P
Sbjct: 65  LSLSDNEIARLP--PEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLP 122

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
           EGF  L +LT L L+D ++  LPP++ S+
Sbjct: 123 EGFTQLRNLTHLGLNDISLMRLPPDIGSL 151


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 245/527 (46%), Gaps = 47/527 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP------------------ 84
           E   L+KL L+ N   KL + L  L  L VL +S  +++ +P                  
Sbjct: 246 ELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNP 305

Query: 85  -----AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ-LKELPSSLGRCLN 138
                  +G+L  +K LD+S   +  +P E+G+ T L +   ++N+ L+ LP  L +  N
Sbjct: 306 LQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTN 365

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           +     SN  + +LP ++   +++  LD+  N L  L   L    T +  L  S   L+ 
Sbjct: 366 IKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPREL-GHVTNIKRLDLSHCQLHT 424

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  +G L+ L  L +  N + ++P  +    S+    + N  L  LP E+G L++L  L
Sbjct: 425 LPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERL 484

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            + +N L+    E  ++  +  LDLS+  L  LPPE+G +T L  L L GNPL+ L   +
Sbjct: 485 KVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQI 544

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G   A+ K+L          +  T   ++ T+        + LSL+G  L  +P ++ 
Sbjct: 545 --GQLTAI-KHLNLSF-----CQLHTLPPEMGTLKQL-----EWLSLQGNPLQMLPKQVE 591

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDN 436
               I  ++LS   +Q LPPE      L+ L LS N +++  P   LT++  L    L N
Sbjct: 592 NLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHLD---LSN 648

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
             L+ +P +   ++  ++ L LS N +  LP  P    L +++ L +   +L E P ++ 
Sbjct: 649 CSLQTLPPE-VGELKHVEYLRLSSNPLQKLP--PEVRHLTNIKHLDMSNCRLNELPIEVG 705

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            + QLR LDL  N LQ +P       +L  LD+  N +   P E+ S
Sbjct: 706 TMTQLRQLDLRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEVCS 752



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 276/625 (44%), Gaps = 109/625 (17%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           +IL  A+   +L+LSN++ +D+P+EV++  +       + E++ L   ++   N      
Sbjct: 79  KILGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESISLSNKLVKLTN------ 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS-------------------- 102
                  L VL + +  L +LP  + +L  L+ LD+S N                     
Sbjct: 133 -------LKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKL 185

Query: 103 ----IMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
               ++ I  +I    + L + D S N   +LP  L    N+   + +   +T++P  + 
Sbjct: 186 RDCDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVL 245

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET--------------- 202
           + S++ KLD+ GNK   LS+ L+   T L  L  S+  +  +PE                
Sbjct: 246 ELSQLEKLDLSGNKQIKLSDQLLGL-TNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSN 304

Query: 203 --------IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN-ALSALPAELGKLS 253
                   +G LSR+ RLDL    + ++P  +     L    + NN AL  LP EL +++
Sbjct: 305 PLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVT 364

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  LDL + QL     E   L +L  LDLS N+L  LP E+G +T +++L L+   L T
Sbjct: 365 NIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHT 424

Query: 313 LRSSLVNGPTPALLKYLRSR------LPENEDSEASTTKED-----LITMATRLSVTSKE 361
           L   +        LK+L+ +      LP      AS    D     L T+   +   ++ 
Sbjct: 425 LPPQVGK---LTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQL 481

Query: 362 LSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
             L+  N  L  +P E+W+   I +LDLS   +  LPPE+ +   L+ L L  N ++  P
Sbjct: 482 ERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLP 541

Query: 420 DAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
             I                      + +L  L  L L  NPL+ +P    +++  ++ ++
Sbjct: 542 KQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQ-VENLTHIKWMN 600

Query: 458 LSY-NIASLPENPPFSSLPHLQELYLR-RMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           LS+  +  LP  P F  L  L+ LYL    +L+  PT   +L  ++ LDLS  SLQ++P 
Sbjct: 601 LSHCRLQMLP--PEFGKLTQLERLYLSCNGELQTLPTR--QLTNIKHLDLSNCSLQTLPP 656

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L  +  L LS N +  LPPE+
Sbjct: 657 EVGELKHVEYLRLSSNPLQKLPPEV 681



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 198/440 (45%), Gaps = 53/440 (12%)

Query: 17  SNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVS 76
           +NR+L+ +P E+             W+  ++++L L++  +  L  ++  L  L  L++S
Sbjct: 349 NNRALQTLPGEL-------------WQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLS 395

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
            N L  LP  +G +  +K LD+S   +  +P ++G  T L      +N L+ LP  LG+ 
Sbjct: 396 FNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQV 455

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            ++     SN  + +LP ++   +++ +L V  N L  L   L    T +  L  S   L
Sbjct: 456 ASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKV-TNIKRLDLSSCWL 514

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + +P  +G+L++L  L L  N +  +P  I    ++    +    L  LP E+G L +L 
Sbjct: 515 DTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLE 574

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L  N L+    +   L  +  ++LS+  L  LPPE GK+T L +L L+ N       
Sbjct: 575 WLSLQGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCN------- 627

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                                          +L T+ TR     K L L   +L  +P E
Sbjct: 628 ------------------------------GELQTLPTRQLTNIKHLDLSNCSLQTLPPE 657

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           + E   +  L LS N +Q+LPPE+    +++ L +S  ++ + P  + T ++ L  L L 
Sbjct: 658 VGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGT-MTQLRQLDLR 716

Query: 436 NNPLRQVPSDGFKDIPMLQI 455
            N L+ +P +  + I +  +
Sbjct: 717 YNQLQMLPVEITQHINLYHL 736



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 54/466 (11%)

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           +G+   L +LD+S  +   +PDE+     L     + N+   L + L +  NL      N
Sbjct: 81  LGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESISLSNKLVKLTNLKVLCLEN 140

Query: 147 NCITSLPEDLADCSKMSKLDVEGNK-LTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
             +  LP  +   S +  LD+  NK +++    L     +    +   +L+    +    
Sbjct: 141 CNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKLRDCDLVTIGRQIFQQ 200

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            S+L  LDL  N  + +P  +    ++    +    ++ +P  + +LS+L  LDL  N+ 
Sbjct: 201 ESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQ 260

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            +   +   L  L VL LS   ++ +P  + K+T L +L L  NPL+TL  S+  G    
Sbjct: 261 IKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNPLQTL--SVKVGQLSR 318

Query: 325 LLK------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
           + +      +LR+  PE             +T   RL V +         L  +P E+W+
Sbjct: 319 IKRLDLSNCHLRTLPPE----------VGTLTQLERLKVANNR------ALQTLPGELWQ 362

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              I +LDLS   +  LPPE+ +   L+ L LS N ++  P  +                
Sbjct: 363 VTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPREL---------------- 406

Query: 439 LRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
                      +  ++ LDLS+  + +LP  P    L HL+ L ++   L+  P ++ ++
Sbjct: 407 ---------GHVTNIKRLDLSHCQLHTLP--PQVGKLTHLKWLKVKNNPLQTLPGELGQV 455

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             ++ LDLS   L ++P     LT L  L +++N +  LP EL  V
Sbjct: 456 ASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKV 501



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +++ L L++ +++ L  ++  L  +  L +S N L +LP  +  L  +K LD+S   
Sbjct: 637 QLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNCR 696

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + ++P E+G+ T L + D   NQL+ LP  + + +NL       N +   P ++  CS+
Sbjct: 697 LNELPIEVGTMTQLRQLDLRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEV--CSQ 753


>gi|195504035|ref|XP_002098907.1| GE23676 [Drosophila yakuba]
 gi|194185008|gb|EDW98619.1| GE23676 [Drosophila yakuba]
          Length = 1857

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
           sapiens]
          Length = 434

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 26  LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 72

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 73  SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 132

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 133 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 192

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 193 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 250

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 251 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 310

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 311 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 334

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 335 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 393

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 394 KLSIMSIENCPLSHLP 409



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 50/430 (11%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I  +  +
Sbjct: 3   LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD 62

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ LD++ 
Sbjct: 63  IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQH 122

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L                          +P+TIG+LS L RL L  NR+ +IP S++ C
Sbjct: 123 NELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKC 158

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNNS 286
            +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L++ +N 
Sbjct: 159 SALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNR 218

Query: 287 LSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  +    
Sbjct: 219 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 278

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++    L
Sbjct: 279 LEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 325

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
           Q L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y    L
Sbjct: 326 QKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY----L 376

Query: 466 PENPPFSSLP 475
            +NP   SLP
Sbjct: 377 NDNPNLHSLP 386



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 197/405 (48%), Gaps = 28/405 (6%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S N +TSLP+ L +  K+  LD+  NKL  + + ++     LT L    N +  + + I 
Sbjct: 6   SENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIK 64

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +LS+L  L + +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+
Sbjct: 65  NLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNE 124

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----RSSLVN 319
           L +       L  LS L L  N LS +P  + K + L +L L  N + TL     SSLV 
Sbjct: 125 LLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVK 184

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
             +  L +      P    S+ ST                  L++E   ++ IP  I+  
Sbjct: 185 LNSLTLARNCFQLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSR 229

Query: 380 GEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
            ++ +KL++  N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN 
Sbjct: 230 AKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNL 288

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L+++P  G  ++  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L
Sbjct: 289 LKKLP-HGLGNLRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHL 345

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
             L  L L +N L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 346 TNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 390



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 226 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 272

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 273 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 332

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 333 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 392

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 393 SKLSIMSIENCPLSHLPPQIVAG 415



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 5/182 (2%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+L   +L+++P  +    ++  LDL  N ++E+P  +    SL TL L  N+I      
Sbjct: 3   LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD 62

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I  +LS LS L +  N ++Q+P++   ++  L  LD+++N +  LP+     +   +  L
Sbjct: 63  I-KNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHLPKE--IGNCTQITNL 118

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L+  +L + P  I  L  L  L L  N L +IP      ++L EL+L +NNIS LP  L
Sbjct: 119 DLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESL 178

Query: 541 VS 542
           +S
Sbjct: 179 LS 180


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     + N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL----RTLRSSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N +     +L SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L  N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL L+ N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   ISALP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLS 328


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     + N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL----RTLRSSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N +     +L SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L  N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL L+ N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   ISALP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLS 328


>gi|407044559|gb|EKE42674.1| leucine-rich repeat containing protein [Entamoeba nuttalli P19]
          Length = 508

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 212/444 (47%), Gaps = 34/444 (7%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S   L E P  + +C+  ++F AS N  TS+PED+     +  L +  N++T + ++
Sbjct: 21  IEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCLMPNLEVLTLSNNRITSIPDS 79

Query: 179 LIASWTMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            I   + L EL   KN    +G+   I   S L RLD+  N++ SIP  I    SL    
Sbjct: 80  -IQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLN 138

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +  N L +LP E+G L KL TL ++ N +++   E   LR L  LDLSNN +  LP E+ 
Sbjct: 139 ISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELS 198

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            M  L+ L +  N L      L N       K+L     +N          D +   TRL
Sbjct: 199 NMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQNNQGILELPPLDSLQNLTRL 252

Query: 356 SVTS---------------KELSL-EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            V +                EL++ + + +  +P EI+    + +LD    +I  LPP +
Sbjct: 253 VVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNITVLPPNI 312

Query: 400 SSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           +S  +L  L L+ N + +  +P+ I ++L+++S L + NN +   P     D+  +  LD
Sbjct: 313 TSLTNLNILELAHNSLNESSFPEGI-STLTNISKLSISNNQIHSYP-QCLCDLTSIVELD 370

Query: 458 LSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           +S N+   LPE   FS+L ++Q L +   +L   P  + RL  +  LD   N L+S+P  
Sbjct: 371 VSNNLMVELPET--FSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLPAS 428

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             +L  L  L+L+ N I  LP E+
Sbjct: 429 IGDLRQLNRLELTQNMIPVLPVEM 452



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 214/462 (46%), Gaps = 74/462 (16%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEA--GEGDKWWEAV--------DLQKLILAHNNIEKLK 61
           L LSN  +  +P+ + K  N  E   G+ + +++ +        +LQ+L ++ N +E + 
Sbjct: 66  LTLSNNRITSIPDSIQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIP 125

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ +L  L  LN+S N L  LP  IG L  L++L V+ NSI K+P EIG+  +L + D 
Sbjct: 126 PEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDL 185

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK-------LTV 174
           S+NQ+  LP  L   + L   +   N ++   + L +   + +LD + N+       L  
Sbjct: 186 SNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPPLDS 245

Query: 175 LSN-------NL-------IASWTMLTELIASKNL-LNGMPETIGSLSRLIRLDLHQNRI 219
           L N       NL       ++S  ML EL    N+ + GMPE I +++ L RLD     I
Sbjct: 246 LQNLTRLVVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNI 305

Query: 220 LSIPSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
             +P +I+   +L    + +N+L  S+ P  +  L+ +  L + +NQ+  Y    C L  
Sbjct: 306 TVLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNNQIHSYPQCLCDLTS 365

Query: 278 SV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            V LD+SNN +  LP     +T ++ L + GN L                    +RLPE 
Sbjct: 366 IVELDVSNNLMVELPETFSNLTNVQNLTVAGNRL--------------------NRLPE- 404

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                        ++   +SVT   L      L ++P+ I +  ++ +L+L++N I  LP
Sbjct: 405 -------------SLGRLISVTY--LDARNNQLKSLPASIGDLRQLNRLELTQNMIPVLP 449

Query: 397 PELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
            E+      LQT+ L+ N +   P  ++   +   C  L +N
Sbjct: 450 VEMGQLDGILQTIELTNNPLVVPPKEVVIKGAHEICKYLKDN 491



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 182/389 (46%), Gaps = 41/389 (10%)

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S +++ G  L+     +  S  + T   AS+N    +PE +  +  L  L L  NRI SI
Sbjct: 19  SSIEISGKNLSEFPKQI--SKCVCTNFNASQNDFTSIPEDVCLMPNLEVLTLSNNRITSI 76

Query: 223 PSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
           P SI    +L E Y+G N L    + +E+   S L  LD+  N+L+    E    L L  
Sbjct: 77  PDSIQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQY 136

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L++S N+L  LPPEIG +  L+ LL+  N +R L         P  +  LRS      + 
Sbjct: 137 LNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKL---------PTEIGNLRSLY----EL 183

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPE 398
           + S  + DL+       +  K L +    LS     +     + +LD   N  I ELPP 
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-------DNNPLRQVPSDGFKDIP 451
                SLQ L  +R  +K+ P   +T++  LS LK+       DN  ++ +P + F +I 
Sbjct: 243 ---LDSLQNL--TRLVVKNLP---ITNIPGLSSLKMLCELNVRDNIKMKGMPEEIF-NIA 293

Query: 452 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQN 508
            LQ LD    NI  LP  P  +SL +L  L L    L E+  P  I  L  +  L +S N
Sbjct: 294 SLQRLDFVGCNITVLP--PNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNN 351

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALP 537
            + S P+   +LTS+ ELD+S+N +  LP
Sbjct: 352 QIHSYPQCLCDLTSIVELDVSNNLMVELP 380



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 6/186 (3%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           +T   + + G NLS  P +I +    T  + S+N    +P ++    +L+ L LS N+I 
Sbjct: 16  LTQSSIEISGKNLSEFPKQISKC-VCTNFNASQNDFTSIPEDVCLMPNLEVLTLSNNRIT 74

Query: 417 DWPDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
             PD+I  + S+L  L L  NN      S   K    LQ LD+S N + S+P  P   SL
Sbjct: 75  SIPDSIQKA-SNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIP--PEIGSL 131

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             LQ L +    L+  P +I  L +L+ L +++NS++ +P    NL SL ELDLS+N + 
Sbjct: 132 LSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMD 191

Query: 535 ALPPEL 540
            LP EL
Sbjct: 192 LLPEEL 197



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 60/290 (20%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL LSNN ++ +P  I K + LR+L L  N L                          
Sbjct: 63  LEVLTLSNNRITSIPDSIQKASNLRELYLGKNNLFY------------------------ 98

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                     D I+   ++    + L +    L +IP EI     +  L++S N+++ LP
Sbjct: 99  ----------DGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLP 148

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
           PE+     LQTL++++N I+  P  I  +L SL  L L NN +  +P +   ++  L+IL
Sbjct: 149 PEIGMLDKLQTLLVNKNSIRKLPTEI-GNLRSLYELDLSNNQMDLLPEE-LSNMIALKIL 206

Query: 457 DLSYNIAS----------------------LPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            + +N  S                      + E PP  SL +L  L ++ + +   P  +
Sbjct: 207 RIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPPLDSLQNLTRLVVKNLPITNIP-GL 265

Query: 495 LRLQQLRILDLSQN-SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L+ L  L++  N  ++ +PE   N+ SL  LD    NI+ LPP + S+
Sbjct: 266 SSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNITVLPPNITSL 315


>gi|194907948|ref|XP_001981667.1| GG11485 [Drosophila erecta]
 gi|190656305|gb|EDV53537.1| GG11485 [Drosophila erecta]
          Length = 1855

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKRLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|195110491|ref|XP_001999813.1| GI22874 [Drosophila mojavensis]
 gi|193916407|gb|EDW15274.1| GI22874 [Drosophila mojavensis]
          Length = 1865

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I     LT+L  ++
Sbjct: 195 GYLPGLQELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-IGGMVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G ++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPASIGNMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 180/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N
Sbjct: 195 GYLPGLQELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N                          
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGN-------------------------- 288

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                      V  +EL L    LS +P+ I    +++ L++ RN+++ LP E+  C++L
Sbjct: 289 ----------CVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 134/239 (56%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L+ L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG++++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 164/356 (46%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L    +EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-QELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCVNMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I  + +L  L++ +N+L+ +P      ++L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL 355



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LNRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 12/306 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L +N + +L E +  L  LT L +S NKL+ +PA IG+L  LK L ++ N +  +
Sbjct: 70  LWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDL 129

Query: 107 PDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P + IG  T+L   + S N+L  +P+ +GR  +L+      N +TS+P ++   + ++ L
Sbjct: 130 PGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVL 189

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++GN+LT +    I   T LT L  S N L  +P  IG L+ L  L L  N++ S+P+ 
Sbjct: 190 RLDGNRLTSVPAE-IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE 248

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  N L+++PAE+G+L+ L  L L  N+L     E  +L  L  L LS+
Sbjct: 249 IGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSD 308

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EIG++T+LR+  L  N L ++         PA +  LR R     D   +  
Sbjct: 309 NKLTSVPAEIGRLTSLREFTLHNNKLTSV---------PAEIWRLRERGYAYLDEGVTIE 359

Query: 345 KEDLIT 350
            E+  T
Sbjct: 360 GENFTT 365



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 165/343 (48%), Gaps = 64/343 (18%)

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  +G L+ L  L+L  N +  +P  ISG  SL + ++ +N L+++PAE+G+L+ L  L 
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 260 LHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           + +N+L++   +       L+ L+LS+N L+ +P EIG++T+L  L L GN L ++    
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSV---- 176

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                PA +  L                       T L+V    L L+G  L+++P+EI 
Sbjct: 177 -----PAEIGRL-----------------------TSLTV----LRLDGNRLTSVPAEIG 204

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
               +T L LS N +  +P E+    SL  L L  NK+   P A +  L+SL+ L+LD N
Sbjct: 205 RLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVP-AEIGRLTSLTVLRLDGN 263

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
            L  VP++                            L  L+ L+L   +L   P +I RL
Sbjct: 264 RLTSVPAE-------------------------IGQLTALEGLFLDGNKLTSVPAEIGRL 298

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L  L LS N L S+P     LTSL E  L +N ++++P E+
Sbjct: 299 TSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEI 341



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 15/264 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL-KEDLRNLPLLTV 72
           L LS+  L  VP E+              +   L+ L + +N +E L  + +  L  LT 
Sbjct: 96  LFLSDNKLTSVPAEIG-------------QLASLKDLRITNNELEDLPGKIIGRLTSLTG 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N+L+ +PA IG L  L  L +  N +  +P EIG  T+L       N+L  +P+ 
Sbjct: 143 LNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +GR  +L+  + S N +TS+P ++   + ++ L ++GNKLT +    I   T LT L   
Sbjct: 203 IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE-IGRLTSLTVLRLD 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  L L  N++ S+P+ I    SL   ++ +N L+++PAE+G+L
Sbjct: 262 GNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR 276
           + L    LH+N+L     E  +LR
Sbjct: 322 TSLREFTLHNNKLTSVPAEIWRLR 345



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 27/329 (8%)

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSEL---PAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           E+L   L +   + VL  +  KL+ L   PA +G L+ L  L++  N + ++P+ I   T
Sbjct: 32  ERLGVVLDDKGRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLT 91

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLT 173
           +L     S N+L  +P+ +G+  +L D + +NN +  LP   +   + ++ L++  N+LT
Sbjct: 92  SLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLT 151

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +    I   T LT L    N L  +P  IG L+ L  L L  NR+ S+P+ I    SL 
Sbjct: 152 SVPAE-IGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLT 210

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              +  N L+++PAE+G+L+ L  L L  N+L     E  +L  L+VL L  N L+ +P 
Sbjct: 211 YLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPA 270

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDL 348
           EIG++T L  L L GN L ++         PA +  L S     L +N+ +        L
Sbjct: 271 EIGQLTALEGLFLDGNKLTSV---------PAEIGRLTSLHALFLSDNKLTSVPAEIGRL 321

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIW 377
            ++        +E +L    L+++P+EIW
Sbjct: 322 TSL--------REFTLHNNKLTSVPAEIW 342



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 37/336 (11%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G + +L+  +    S+   P ++G   AL   +  +N+L ELP  +    +L+D   S+N
Sbjct: 42  GRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDN 101

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +TS+P ++   + +  L +  N+L  L   +I   T LT L  S N L  +P  IG L+
Sbjct: 102 KLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLT 161

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++ S+P+ I    SL    +  N L+++PAE+G+L+ L  L L  N+L  
Sbjct: 162 SLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTS 221

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L  L+ L L  N L+ +P EIG++T+L  L L GN L ++         PA +
Sbjct: 222 VPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSV---------PAEI 272

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L             T  E L               L+G  L+++P+EI     +  L 
Sbjct: 273 GQL-------------TALEGLF--------------LDGNKLTSVPAEIGRLTSLHALF 305

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           LS N +  +P E+    SL+   L  NK+   P  I
Sbjct: 306 LSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEI 341



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 168/366 (45%), Gaps = 40/366 (10%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           EL  A G   +    +     +  + D+ G    L   +     L   P+ LGR   L  
Sbjct: 13  ELQGAFGFFDVDSKTEEGRERLGVVLDDKGRVAVLEWNEKKLASLSPAPADLGRLNALWG 72

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP- 200
               NN +T LPE ++  + ++ L +  NKLT +    I     L +L  + N L  +P 
Sbjct: 73  LNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAE-IGQLASLKDLRITNNELEDLPG 131

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L+ L  L+L  NR+ S+P+ I    SL    +  N L+++PAE+G+L+ L  L L
Sbjct: 132 KIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRL 191

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+L     E  +L  L+ L LS N L+ +P EIG++T+L  L L GN L ++      
Sbjct: 192 DGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSV------ 245

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              PA +  L                       T L+V    L L+G  L+++P+EI + 
Sbjct: 246 ---PAEIGRL-----------------------TSLTV----LRLDGNRLTSVPAEIGQL 275

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  L L  N +  +P E+    SL  L LS NK+   P A +  L+SL    L NN L
Sbjct: 276 TALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVP-AEIGRLTSLREFTLHNNKL 334

Query: 440 RQVPSD 445
             VP++
Sbjct: 335 TSVPAE 340



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 13/243 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L ++N  L D+P ++                  L  L L+ N +  +  ++  L  LT L
Sbjct: 119 LRITNNELEDLPGKIIGRL------------TSLTGLNLSDNRLTSVPAEIGRLTSLTGL 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  NKL+ +PA IG L  L  L +  N +  +P EIG  T+L     S N+L  +P+ +
Sbjct: 167 GLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  +L+      N +TS+P ++   + ++ L ++GN+LT +    I   T L  L    
Sbjct: 227 GRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE-IGQLTALEGLFLDG 285

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L  N++ S+P+ I    SL EF + NN L+++PAE+ +L 
Sbjct: 286 NKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEIWRLR 345

Query: 254 KLG 256
           + G
Sbjct: 346 ERG 348



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           AP D+ RL  L  L+L  N L  +PEG   LTSLT+L LSDN ++++P E+
Sbjct: 60  APADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEI 110


>gi|47214759|emb|CAG01294.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 594

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 56/407 (13%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R+   ++ +    L +  LR++P  VY+                L  L L  N I  +++
Sbjct: 151 RLFGLSQKAADAGLRHNKLREIPAVVYR-------------LSTLTTLYLRFNRITAVEK 197

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL  LT+L++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D  
Sbjct: 198 DIRNLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQ 257

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L +LP ++G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S
Sbjct: 258 HNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSS 317

Query: 183 WTMLTELIASKNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMG 238
              LT L  ++N     P  +G     S +  L++  N I  IP  I S    L++  M 
Sbjct: 318 LVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMK 375

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L++LP + G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +
Sbjct: 376 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNL 435

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             LR+L L  N L  L         P  + YL+                DL         
Sbjct: 436 RKLRELDLEENKLECL---------PNEIAYLK----------------DL--------- 461

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             ++L L    L+ +P  I     +T L L  N +Q LP E+   A+
Sbjct: 462 --QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAA 506



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 204/452 (45%), Gaps = 62/452 (13%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ LG             C++SLP  
Sbjct: 105 LDLSKRSIHMLPTSIKGVTQLAELYLYSNKLQSLPAELG-------------CLSSLPAR 151

Query: 156 LADCS-KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           L   S K +   +  NKL  +   ++   + LT L    N +  + + I +LS+L  L +
Sbjct: 152 LFGLSQKAADAGLRHNKLREIP-AVVYRLSTLTTLYLRFNRITAVEKDIRNLSKLTMLSI 210

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +N+I  +P+ I   CSL    + +N L  LP E+G  +K+  LDL  N+L +       
Sbjct: 211 RENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGN 270

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYL 329
           L  ++ L L  N LS +P  + K   L +L L  N +  L     SSLV   +  L +  
Sbjct: 271 LASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNC 330

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLS 388
               P    S+ ST                  L++E   ++ IP  I+   ++ +KL++ 
Sbjct: 331 FQSYPVGGPSQFSTI---------------YSLNMEHNCINKIPFGIFSRAKVLSKLNMK 375

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP +  +  S+  L L+ N++   P+ +   L SL  L L NN L+++P  G  
Sbjct: 376 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-CGLVSLEVLILSNNLLKKLP-HGIG 433

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           ++  L+ LDL  N                        +L   P +I  L+ L+ L L+ N
Sbjct: 434 NLRKLRELDLEEN------------------------KLECLPNEIAYLKDLQKLVLTNN 469

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P G  +LT+LT L L +N +  LP E+
Sbjct: 470 QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEI 501



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 171/376 (45%), Gaps = 52/376 (13%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLS----RLIRL-------DLHQNRILSIPSSISG 228
           I   T L EL    N L  +P  +G LS    RL  L        L  N++  IP+ +  
Sbjct: 119 IKGVTQLAELYLYSNKLQSLPAELGCLSSLPARLFGLSQKAADAGLRHNKLREIPAVVYR 178

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +L   Y+  N ++A+  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L
Sbjct: 179 LSTLTTLYLRFNRITAVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQL 238

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP EIG  T +  L L  N L  L                    PE   + AS  +  
Sbjct: 239 EHLPKEIGNCTKITNLDLQHNELLDL--------------------PETIGNLASINR-- 276

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQ 406
                         L L    LSAIP  + +  E+ +L+L  N+I  LP  L SS   L 
Sbjct: 277 --------------LGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLT 322

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
           +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++  N + SL
Sbjct: 323 SLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSL 382

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  NL  L E
Sbjct: 383 PLD--FGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRE 440

Query: 526 LDLSDNNISALPPELV 541
           LDL +N +  LP E+ 
Sbjct: 441 LDLEENKLECLPNEIA 456



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 148/351 (42%), Gaps = 47/351 (13%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P+SI G   LAE Y+ +N L +LPAELG LS L       +Q     
Sbjct: 103 MRLDLSKRSIHMLPTSIKGVTQLAELYLYSNKLQSLPAELGCLSSLPARLFGLSQ----- 157

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                 + +   L +N L  +P  + +++TL  L L  N +  +   + N     L K  
Sbjct: 158 ------KAADAGLRHNKLREIPAVVYRLSTLTTLYLRFNRITAVEKDIRN-----LSKLT 206

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              + EN+  +      +L ++ T        L +    L  +P EI    +IT LDL  
Sbjct: 207 MLSIRENKIKQLPAEIGELCSLVT--------LDVAHNQLEHLPKEIGNCTKITNLDLQH 258

Query: 390 NSIQELPPELSSCASLQTLILSRNK-----------------------IKDWPDAILTSL 426
           N + +LP  + + AS+  L L  N+                       I   P+ +L+SL
Sbjct: 259 NELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSL 318

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
             L+ L L  N  +  P  G      +  L++ +N  +      FS    L +L ++  Q
Sbjct: 319 VKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQ 378

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L   P D      +  L+L+ N L  IPE    L SL  L LS+N +  LP
Sbjct: 379 LTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLP 429



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 13/250 (5%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN ++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 348 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 407

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 408 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 466

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA---- 247
           + N L  +P  IG L+ L  L L +N +  +P  I    S AE    +  LSA P     
Sbjct: 467 TNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGE--SAAEPRC-SRRLSANPTPPRL 523

Query: 248 ELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKL 303
             G L  L  L L+ N  L     E A   +LS++ + N  LS LPP+I  G  + + + 
Sbjct: 524 SSGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQF 583

Query: 304 LLTGNPLRTL 313
           L    P R +
Sbjct: 584 LKMQGPYRAM 593



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 87/227 (38%), Gaps = 61/227 (26%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 362 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 408

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 409 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 468

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED---------------------------- 155
           NQL  LP  +G   NL+      N +  LPE+                            
Sbjct: 469 NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAAEPRCSRRLSANPTPPRLSSGTL 528

Query: 156 --------------------LADCSKMSKLDVEGNKLTVLSNNLIAS 182
                               LA CSK+S + +E   L+ L   ++A 
Sbjct: 529 ENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 575



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 39/219 (17%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI--------- 409
           S  L L   ++  +P+ I    ++ +L L  N +Q LP EL   +SL   +         
Sbjct: 102 SMRLDLSKRSIHMLPTSIKGVTQLAELYLYSNKLQSLPAELGCLSSLPARLFGLSQKAAD 161

Query: 410 --LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
             L  NK+++ P A++  LS+L+ L L  N +  V  D  +++  L +L +  N I  LP
Sbjct: 162 AGLRHNKLREIP-AVVYRLSTLTTLYLRFNRITAVEKD-IRNLSKLTMLSIRENKIKQLP 219

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  L  L  L +   QL   P +I    ++  LDL  N L  +PE   NL S+  L
Sbjct: 220 AE--IGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRL 277

Query: 527 DLSDNN-----------------------ISALPPELVS 542
            L  N                        IS LP  L+S
Sbjct: 278 GLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLS 316


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 209/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N +  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|62472958|ref|NP_001014669.1| scribbled, isoform I [Drosophila melanogaster]
 gi|61679402|gb|AAX52996.1| scribbled, isoform I [Drosophila melanogaster]
          Length = 1711

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
          Length = 506

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 206/446 (46%), Gaps = 54/446 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I+ + +++RNL  L  L
Sbjct: 99  LDLRHNKLNEIPDVVYK-------------LKSLVTLFLRFNRIKYVSDNIRNLTNLATL 145

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+ IG+   L + DVS N +  +P+EIG    L   D   N L ++P S+
Sbjct: 146 SLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSI 205

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L       N +TS+PE L++C  M +  VEGN ++ + + L++S + LT +  S+
Sbjct: 206 GNLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSR 265

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  + +  + + QN+I  IP  I S    L +  M +N L+ALP ++G 
Sbjct: 266 NNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGT 325

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +NQL +   +   L+ L VL LSNN L  L   I  +  LR L L  N L
Sbjct: 326 WVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIANLRKLRVLDLEENRL 385

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + +LR                             ++L L+   L+
Sbjct: 386 ESL---------PNEIGFLREL---------------------------QQLVLQSNQLT 409

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSL 429
           ++P  I     +T   +  N++  LP E+ +  +L+TL ++ N  + + P   L     L
Sbjct: 410 SLPRAIGHLTNLTVFSVGENNLNYLPEEIGTLENLETLHINDNANLHNLPFE-LALCPKL 468

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQI 455
             + +DN PL  +P +     P + I
Sbjct: 469 IFMSIDNCPLSLMPPEIVAGGPAMVI 494



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 215/455 (47%), Gaps = 28/455 (6%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           K LD+S  SI  +P  +   T L +F    N+L  LPS +G   NL     + N +TSLP
Sbjct: 28  KLLDLSKASITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLP 87

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
             L +  ++  LD+  NKL  +  +++     L  L    N +  + + I +L+ L  L 
Sbjct: 88  NTLENLKRLRVLDLRHNKLNEIP-DVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLS 146

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L +N+I  +PS I    +L  F + +N L  LP E+GK  +L TLDL  N L +      
Sbjct: 147 LRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSIG 206

Query: 274 QLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLKY 328
            L L + L L  N+L+ +P  +     + +  + GN +      L SSL N  T  L + 
Sbjct: 207 NLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRN 266

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDL 387
             +  P    S+ +                   +S+E   +  IP  I+  A ++TKL++
Sbjct: 267 NFTSYPSGGPSQFTNI---------------YSISMEQNQIDKIPYGIFSRAKKLTKLNM 311

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
             N +  LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++ S   
Sbjct: 312 RDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDI-QFLQNLEVLILSNNLLKRL-SASI 369

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            ++  L++LDL  N + SLP    F  L  LQ+L L+  QL   P  I  L  L +  + 
Sbjct: 370 ANLRKLRVLDLEENRLESLPNEIGF--LRELQQLVLQSNQLTSLPRAIGHLTNLTVFSVG 427

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           +N+L  +PE    L +L  L ++DN N+  LP EL
Sbjct: 428 ENNLNYLPEEIGTLENLETLHINDNANLHNLPFEL 462



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 200/450 (44%), Gaps = 91/450 (20%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L   L NL  L VL++ HNKL+E+P  + +L  L +L + FN I  
Sbjct: 72  NLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKY 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N++KELPS +G  LNL  F  S+N +  LPE++  C ++S L
Sbjct: 132 VSDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +P++IG+L  L+RL L  N + SIP S
Sbjct: 192 DLQHNDLL------------------------DIPDSIGNLVLLMRLGLRYNALTSIPES 227

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +S C  + EF +  N +S +P   L  LS L T+ L  N    Y               +
Sbjct: 228 LSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISM 287

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           E  Q+            +L+ L++ +N L+ LP +IG    + +L L  N L        
Sbjct: 288 EQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQL-------- 339

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                       +++P++            I     L V    L L    L  + + I  
Sbjct: 340 ------------TKIPDD------------IQFLQNLEV----LILSNNLLKRLSASIAN 371

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             ++  LDL  N ++ LP E+     LQ L+L  N++   P AI   L++L+   +  N 
Sbjct: 372 LRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLPRAI-GHLTNLTVFSVGENN 430

Query: 439 LRQVPSD--GFKDIPMLQILDLSYNIASLP 466
           L  +P +    +++  L I D + N+ +LP
Sbjct: 431 LNYLPEEIGTLENLETLHIND-NANLHNLP 459


>gi|426227298|ref|XP_004007755.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Ovis aries]
          Length = 870

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 242/535 (45%), Gaps = 65/535 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK-EDLRNLPLLT 71
           ++NL  R L++ P ++ K                ++ L L  N I+  K  D R++  L 
Sbjct: 155 TVNLKARGLQEFPKDILK-------------VQYVKHLYLDENEIKSFKGADSRDMLGLE 201

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS LP+ I  LH LK L+VS+N I  IP EI     + +   ++N +++ PS
Sbjct: 202 ILSIQKNGLSTLPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIRELFLNNNCIEDFPS 261

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L    NL     + N +  +P+ L+    +  L++E N+LT+       +   L +LI+
Sbjct: 262 GLESLKNLEILNLAKNKLRHVPDALSSLKNLRALNLEYNQLTIFP----KALCFLPKLIS 317

Query: 192 ---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
              + NL+N +P+ I  L  L +L L  N++  +   I     + E  + +N L  +  +
Sbjct: 318 LNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLRMKELQLTDNKLEVISNK 377

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +    +L  L L  N LK+    +  C + L  L LS+N L+ LP  I K+  LRKL + 
Sbjct: 378 IENFKELRILMLDKNLLKDMPENISHCAV-LECLSLSDNKLTELPKNIHKLKNLRKLHIN 436

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L  +         P  + +L +                              L   G
Sbjct: 437 RNYLVKI---------PEYISHLNNMFS---------------------------LEFSG 460

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             ++  P EI     I K++LS N I   P  L +  SL  L  + N I + P  I  + 
Sbjct: 461 NFITDFPIEIKNCKNIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYISEIPVDISFN- 519

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
             L  L+L+ N L  + S+    +  L+ LDL  N I  +P  P  S++  L  L L   
Sbjct: 520 KQLLHLELNENKLL-IFSEHLCSLINLEYLDLGKNKIRKIP--PSISNMVSLHVLILCYN 576

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L   PT++  L  LR+LDLS+N +Q+IP    NL  + +L++S+N     P EL
Sbjct: 577 KLETFPTEVCALDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVEL 631



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 249/536 (46%), Gaps = 61/536 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S   +  +P E+     + G         ++++L L +N IE     L +L  L +L
Sbjct: 226 LNVSYNQISHIPKEI----SQLG---------NIRELFLNNNCIEDFPSGLESLKNLEIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  +P A+  L  L++L++ +N +   P  +     L+  + + N +  LP  +
Sbjct: 273 NLAKNKLRHVPDALSSLKNLRALNLEYNQLTIFPKALCFLPKLISLNLTGNLINSLPKEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    +M +L +  NKL V+SN  I ++  L  L+  K
Sbjct: 333 KELKNLEKLLLDHNKLTFLAVEIFLLLRMKELQLTDNKLEVISNK-IENFKELRILMLDK 391

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  MPE I   + L  L L  N++  +P +I    +L + ++  N L  +P  +  L+
Sbjct: 392 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 451

Query: 254 KLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            + +L+   N + ++ +E   C+  ++ ++LS N +   P  +  + +L  L  TGN + 
Sbjct: 452 NMFSLEFSGNFITDFPIEIKNCK-NIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYI- 509

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                              S +P     + S  K+ L             L L    L  
Sbjct: 510 -------------------SEIP----VDISFNKQLL------------HLELNENKLLI 534

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
               +     +  LDL +N I+++PP +S+  SL  LIL  NK++ +P  +  +L +L  
Sbjct: 535 FSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEV-CALDNLRV 593

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM---QL 487
           L L  N ++ +PS+   ++  +Q L++S N     P       L  L+EL + ++   +L
Sbjct: 594 LDLSENQIQTIPSE-ICNLKGIQKLNISNNQFIYFP--VELCHLQSLEELNISQINGKKL 650

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              P ++  + +L  LD+S N+++ +P     L SL  L+  +N I +LPP  +S+
Sbjct: 651 TRLPEELSNMTKLTRLDISNNAIREMPTNIGELRSLVSLNADNNQIRSLPPSFLSL 706



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 27/386 (6%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N ++ + E++ +  +L  L++S NKL+ELP  I +L  L+ L ++ N ++K
Sbjct: 383 ELRILMLDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVK 442

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I     +   + S N + + P  +  C N++  + S N I   P  L     +  L
Sbjct: 443 IPEYISHLNNMFSLEFSGNFITDFPIEIKNCKNIAKVELSYNKIMYFPLGLCALDSLYYL 502

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
              GN ++ +  + I+    L  L  ++N L    E + SL  L  LDL +N+I  IP S
Sbjct: 503 SFTGNYISEIPVD-ISFNKQLLHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIPPS 561

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS   SL    +  N L   P E+  L  L  LDL  NQ++    E C L+ +  L++SN
Sbjct: 562 ISNMVSLHVLILCYNKLETFPTEVCALDNLRVLDLSENQIQTIPSEICNLKGIQKLNISN 621

Query: 285 NSLSGLPPEIGKMTTLRKL---LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           N     P E+  + +L +L    + G  L  L   L N     + K  R  +  N   E 
Sbjct: 622 NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSN-----MTKLTRLDISNNAIREM 676

Query: 342 STTKEDLITMAT--------------RLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLD 386
            T   +L ++ +               LS+ + ++L+L G NLS +PS I+    + +++
Sbjct: 677 PTNIGELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEIN 736

Query: 387 LSRNSIQELPPELSSCASLQTLILSR 412
              N +  L P +  C   Q   ++R
Sbjct: 737 FDDNPL--LRPPMEICKGKQLYTIAR 760



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I K+   + N+  L VL + +NKL   P  +  L  L+ LD+S N I 
Sbjct: 543 INLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCALDNLRVLDLSENQIQ 602

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP EI +   + K + S+NQ    P  L    +L +   S      +T LPE+L++ +K
Sbjct: 603 TIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTK 662

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +++LD+  N +  +  N I     L  L A  N +  +P +  SL+ L +L+L  N +  
Sbjct: 663 LTRLDISNNAIREMPTN-IGELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSV 721

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 722 LPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 758


>gi|28261017|gb|AAO32792.1| scribbled [Drosophila melanogaster]
          Length = 1850

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLKELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|6782322|emb|CAB70601.1| Vartul-1 protein [Drosophila melanogaster]
          Length = 1756

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLKELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 56/435 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N         L   S 
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSK 542

Query: 429 LSCLKLDNNPLRQVP 443
           LS + ++N PL  +P
Sbjct: 543 LSIMSIENCPLSHLP 557



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 538



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|442621262|ref|NP_001262989.1| scribbled, isoform U [Drosophila melanogaster]
 gi|440217926|gb|AGB96369.1| scribbled, isoform U [Drosophila melanogaster]
          Length = 1766

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|7144483|gb|AAF26357.2| Scribble [Drosophila melanogaster]
          Length = 1756

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|260819564|ref|XP_002605106.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
 gi|229290437|gb|EEN61116.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
          Length = 586

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 256/572 (44%), Gaps = 41/572 (7%)

Query: 2   DRILKAARTSGS----LNLSNRSLRDVPNEVYKNFDEAGE---GDKWWEAV--------D 46
           D I      SGS    L+L  R L ++P +++ N DE      G+     V         
Sbjct: 22  DDIQAEVYVSGSGKFCLSLHGRELTEIPPDIF-NMDELNCLFLGNNGISHVPRDIRRLNK 80

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +Q L +  N +  L   + +L  + VL VS N+L+ELP  IG L  L  L  + NS+  +
Sbjct: 81  VQVLAIQDNQLTSLPPTMFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSL 140

Query: 107 PDEIGSATALVKFD-----------CS---SNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           PDE+ S   L               CS    N L  LP  +     L     ++N ITSL
Sbjct: 141 PDEVCSLQQLEVLGLNDNLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNEITSL 200

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  +   +KM  L ++ N+L  +    I     L +L  S N L  +P  + +LS L  L
Sbjct: 201 PAGIRGLTKMKILGLDNNRLERVPKG-ICELDELIKLGLSGNGLKHLPAEMENLSNLREL 259

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L+ N I  +P  +     L E  + NN L +L  ++G+L +L  L L+SN L+    E 
Sbjct: 260 LLNDNEIQYLPVQLYWLECLEELALSNNQLKSLSPQIGRLKELRILGLNSNHLEVLPDEI 319

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C+L  L  L L +N L  LP  +  +  L++L +  N +  +   +       ++    +
Sbjct: 320 CELSCLETLGLDSNRLKALPEHMASLVNLKELYIGNNSIEYIPDDICILTELQIVAMTGN 379

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTS---KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           ++ ++   E +  K  L+      SVT    + +++ G  + ++P EI     + +  L+
Sbjct: 380 KI-DSLPVEIANLKRVLLCYRLLNSVTCSVFQIVAMTGNKIDSLPVEIANLKRVQQFGLN 438

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP  + S   LQ L L  N+I + P    ++L  +  L+L +N L   P D   
Sbjct: 439 HNQMDHLPLGMCSMYDLQLLSLEGNRIPELPSE-FSNLVHIKQLELSSNSLEDFP-DCLC 496

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  L+ L ++ N +  +P     S L  L+   L   Q R+ P +I  L++L  L LS+
Sbjct: 497 VLVQLEYLGMNNNQVDQVP--AEISHLRKLRVFLLNGNQFRDLPKEICTLRKLERLGLSR 554

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           N +  +    K L +LTEL L+ N  +  P +
Sbjct: 555 NLITKVAVEVKKLDNLTELSLNHNQFTDFPTQ 586


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 170/352 (48%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL+++  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P+EI +   + +L LS N ++ L  E+    +L+ L L  N++K  P  I
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 164/357 (45%), Gaps = 38/357 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L    ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR             
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR------------- 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                            EL L    L  + +EI +   + KL L  N ++ LP E+ 
Sbjct: 326 -----------------ELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 42/347 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L+L+ N++ ++P  I    +L E ++  N L+  P E+G+L  L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNL 117

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L     E  QL+ L  L L+ N  +  P EIG++  L++L L  N L+TL 
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           + +        L+ LR                              EL L    L  + +
Sbjct: 178 NEI------GQLQNLR------------------------------ELHLSYNQLKTLSA 201

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  LDL+ N ++ LP E+    +LQ L L+ N+ K  P+ I   L +L  L L
Sbjct: 202 EIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQVLDL 260

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N  + VP +    +  LQ+L L+ N   ++PE      L +LQ L L   QL   P +
Sbjct: 261 GYNQFKTVPEE-IGQLKNLQMLFLNNNQFKTVPEET--GQLKNLQMLSLNANQLTTLPNE 317

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I +L+ LR L LS N L+++      L +L +L L DN +  LP E+
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 166/362 (45%), Gaps = 48/362 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+L++ K     + +LP+++     +  L++  N+L  L    I     L EL  S N
Sbjct: 49  RVLDLNEQK-----LKTLPKEIGQLQNLQVLELNNNQLATLPKE-IGQLQNLQELHLSGN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG L  L  L L +NR+ ++P  I    +L E Y+  N  +A P E+G+L  
Sbjct: 103 QLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++  L+ L L  N L+TL
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +        LK L+                               L L       +P
Sbjct: 223 PKEI------GQLKNLQM------------------------------LDLNNNQFKTVP 246

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  LDL  N  + +P E+    +LQ L L+ N+ K  P+     L +L  L 
Sbjct: 247 EEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET-GQLKNLQMLS 305

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L+ N L  +P++  + +  L+ L LSYN + +L  +     L +L++L LR  QL+  P 
Sbjct: 306 LNANQLTTLPNE-IRQLKNLRELHLSYNQLKTL--SAEIGQLKNLKKLSLRDNQLKTLPK 362

Query: 493 DI 494
           +I
Sbjct: 363 EI 364



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            N L  +   IG L  L +L L  N++ ++P  I 
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365


>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
          Length = 630

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 215/452 (47%), Gaps = 20/452 (4%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S +SI ++P  + + T LV+F   SN+L  LP  +GR +NL     S N +TSLP
Sbjct: 152 QRLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSLP 211

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + L +  ++  LD+  NKLT +  +++     L  L    N +  + E I +L  LI L 
Sbjct: 212 DTLVNLVQLKVLDLRHNKLTEIP-DVVYKLPSLITLFLRFNRIRVVGEEIRNLKNLITLS 270

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L +NRI  +P+ I     L    + +N L  L  E+G    L TL L  N+L E      
Sbjct: 271 LRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIG 330

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            LR L+ L L  N L  +P  + +   L +  + GN +    S L +G   +L       
Sbjct: 331 NLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQI----SQLPDGLLSSLSNLSSLT 386

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNS 391
           L  N  +          T           ++LE   +  IP  I+  A  +TKL+++ N 
Sbjct: 387 LSRNSFNSYPIGGPSQFT-------NVHSINLEHNQVDRIPYGIFSRAKHLTKLNMNYNF 439

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP ++ S  ++  L L  N++   PD I + L +L  L L NN LR++PS    ++ 
Sbjct: 440 LTSLPLDIGSWMNMVELNLGTNQLNKVPDDI-SCLQNLEVLILTNNCLRKIPSS-IGNLR 497

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L++LDL  N +  LP  P    L  LQ+L ++  QL   P  +  L  L  L + +N+L
Sbjct: 498 KLRVLDLEENRLEGLP--PEIGFLKDLQKLVVQSNQLSALPRALGNLINLTYLSVGENNL 555

Query: 511 QSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
             +PE    L SL  L L++N  +  LP EL 
Sbjct: 556 SYLPEEIGTLESLETLYLNENPMLHNLPFELA 587



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 213/447 (47%), Gaps = 56/447 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I  + E++RNL  L  L
Sbjct: 223 LDLRHNKLTEIPDVVYK-------------LPSLITLFLRFNRIRVVGEEIRNLKNLITL 269

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N++ +LP  IGEL  L +LDV+ N +  + +EIG+  +L       N+L ELP S+
Sbjct: 270 SLRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSI 329

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL+      N + S+P  L+ C  + + +VEGN+++ L + L++S + L+ L  S+
Sbjct: 330 GNLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSR 389

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  IG  S+      ++L  N++  IP  I S    L +  M  N L++LP ++
Sbjct: 390 NSFNSYP--IGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKHLTKLNMNYNFLTSLPLDI 447

Query: 250 GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   + +C   L VL L+NN L  +P  IG +  LR L L  N
Sbjct: 448 GSWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEEN 507

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P  + +L+                DL           ++L ++   
Sbjct: 508 RLEGL---------PPEIGFLK----------------DL-----------QKLVVQSNQ 531

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LSA+P  +     +T L +  N++  LP E+ +  SL+TL L+ N +       L   ++
Sbjct: 532 LSALPRALGNLINLTYLSVGENNLSYLPEEIGTLESLETLYLNENPMLHNLPFELALCTN 591

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           L  + ++N PL Q+P +     P L I
Sbjct: 592 LQIMSIENCPLSQIPPEIVAGGPSLVI 618



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 5/180 (2%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           ++ L L   ++S +PS +     + +  L  N +  LPPE+    +LQTL LS N +   
Sbjct: 151 AQRLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSL 210

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD  L +L  L  L L +N L ++P   +K +P L  L L +N I  + E     +L +L
Sbjct: 211 PDT-LVNLVQLKVLDLRHNKLTEIPDVVYK-LPSLITLFLRFNRIRVVGEE--IRNLKNL 266

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L LR  ++R+ P  I  L +L  LD++ N L+ + E   N  SL  L L  N +  LP
Sbjct: 267 ITLSLRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELP 326


>gi|24650332|ref|NP_733154.1| scribbled, isoform A [Drosophila melanogaster]
 gi|386766560|ref|NP_001036761.3| scribbled, isoform B [Drosophila melanogaster]
 gi|23172362|gb|AAN14076.1| scribbled, isoform A [Drosophila melanogaster]
 gi|383292965|gb|ABI31210.3| scribbled, isoform B [Drosophila melanogaster]
          Length = 1756

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|67473011|ref|XP_652293.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469121|gb|EAL46907.1| leucine-rich repeat containing protein [Entamoeba histolytica
           HM-1:IMSS]
 gi|449706384|gb|EMD46243.1| oligodendrocytemyelin glycoprotein precursor, putative [Entamoeba
           histolytica KU27]
          Length = 508

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 213/444 (47%), Gaps = 34/444 (7%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S   L E P  + +C+  ++F AS N  TS+PED+    K+  L +  N++T + ++
Sbjct: 21  IEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCLMPKLEVLTLSNNRITSIPDS 79

Query: 179 LIASWTMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            I   + L EL   +N    +G+   I   S L RLD+  N++ SIP  I    SL    
Sbjct: 80  -IQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLN 138

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +  N L +LP E+G L KL TL ++ N +++   E   LR L  LDLSNN +  LP E+ 
Sbjct: 139 ISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELS 198

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            M  L+ L +  N L      L N       K+L     +N          D +   TRL
Sbjct: 199 NMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQNNQGILELPPLDSLQNLTRL 252

Query: 356 SVTS---------------KELSL-EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            V +                EL++ + + +  +P EI+    + +LD    +I  LPP +
Sbjct: 253 VVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIVSLQRLDFVGCNITVLPPNI 312

Query: 400 SSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           +S  +L  L L+ N + +  +P+ I ++L+++S L + NN +   P     D+  +  LD
Sbjct: 313 TSLTNLNILELAHNSLNESSFPEGI-STLTNISKLSISNNQIHSYPQ-CLCDLTSIVDLD 370

Query: 458 LSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           +S N+   LPE   FS+L ++Q L +   +L   P  + RL  +  LD   N L+S+P  
Sbjct: 371 VSNNLMVELPET--FSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLPAS 428

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             +L  L  L+L+ N I  LP E+
Sbjct: 429 IGDLRQLNRLELTQNMIPVLPVEM 452



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 213/462 (46%), Gaps = 74/462 (16%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEA--GEGDKWWEAV--------DLQKLILAHNNIEKLK 61
           L LSN  +  +P+ + K  N  E   G+ + +++ +        +LQ+L ++ N +E + 
Sbjct: 66  LTLSNNRITSIPDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIP 125

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ +L  L  LN+S N L  LP  IG L  L++L V+ NSI K+P EIG+  +L + D 
Sbjct: 126 PEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDL 185

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK-------LTV 174
           S+NQ+  LP  L   + L   +   N ++   + L +   + +LD + N+       L  
Sbjct: 186 SNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPPLDS 245

Query: 175 LSN-------NL-------IASWTMLTELIASKNL-LNGMPETIGSLSRLIRLDLHQNRI 219
           L N       NL       ++S  ML EL    N+ + GMPE I ++  L RLD     I
Sbjct: 246 LQNLTRLVVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIVSLQRLDFVGCNI 305

Query: 220 LSIPSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
             +P +I+   +L    + +N+L  S+ P  +  L+ +  L + +NQ+  Y    C L  
Sbjct: 306 TVLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNNQIHSYPQCLCDLTS 365

Query: 278 SV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            V LD+SNN +  LP     +T ++ L + GN L                    +RLPE 
Sbjct: 366 IVDLDVSNNLMVELPETFSNLTNVQNLTVAGNRL--------------------NRLPE- 404

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                        ++   +SVT   L      L ++P+ I +  ++ +L+L++N I  LP
Sbjct: 405 -------------SLGRLISVTY--LDARNNQLKSLPASIGDLRQLNRLELTQNMIPVLP 449

Query: 397 PELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
            E+      LQT+ L+ N +   P  ++   +   C  L +N
Sbjct: 450 VEMGQLDGILQTIELTNNPLVVPPKEVVIKGAHEICKYLKDN 491



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 183/389 (47%), Gaps = 41/389 (10%)

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S +++ G  L+     +  S  + T   AS+N    +PE +  + +L  L L  NRI SI
Sbjct: 19  SSIEISGKNLSEFPKQI--SKCVCTNFNASQNDFTSIPEDVCLMPKLEVLTLSNNRITSI 76

Query: 223 PSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
           P SI    +L E Y+G N L    + +E+   S L  LD+  N+L+    E    L L  
Sbjct: 77  PDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQY 136

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L++S N+L  LPPEIG +  L+ LL+  N +R L         P  +  LRS      + 
Sbjct: 137 LNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKL---------PTEIGNLRSLY----EL 183

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPE 398
           + S  + DL+       +  K L +    LS     +     + +LD   N  I ELPP 
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-------DNNPLRQVPSDGFKDIP 451
                SLQ L  +R  +K+ P   +T++  LS LK+       DN  ++ +P + F +I 
Sbjct: 243 ---LDSLQNL--TRLVVKNLP---ITNIPGLSSLKMLCELNVRDNIKMKGMPEEIF-NIV 293

Query: 452 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQN 508
            LQ LD    NI  LP  P  +SL +L  L L    L E+  P  I  L  +  L +S N
Sbjct: 294 SLQRLDFVGCNITVLP--PNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNN 351

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALP 537
            + S P+   +LTS+ +LD+S+N +  LP
Sbjct: 352 QIHSYPQCLCDLTSIVDLDVSNNLMVELP 380



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 87/380 (22%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S  +L+ +P E+       G  DK      LQ L++  N+I KL  ++ NL  L  L
Sbjct: 137 LNISENNLKSLPPEI-------GMLDK------LQTLLVNKNSIRKLPTEIGNLRSLYEL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ-LKELPSS 132
           ++S+N++  LP  +  +  LK L + FN +    D + +   LV+ DC +NQ + ELP  
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 133 LGRCLNLSDFKASNNCITS-----------------------LPEDLADCSKMSKLDVEG 169
           L    NL+     N  IT+                       +PE++ +   + +LD  G
Sbjct: 243 LDSLQNLTRLVVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIVSLQRLDFVG 302

Query: 170 NKLTVL----------------------------------------SNNLIASW------ 183
             +TVL                                        SNN I S+      
Sbjct: 303 CNITVLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNNQIHSYPQCLCD 362

Query: 184 -TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T + +L  S NL+  +PET  +L+ +  L +  NR+  +P S+    S+      NN L
Sbjct: 363 LTSIVDLDVSNNLMVELPETFSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQL 422

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTL 300
            +LPA +G L +L  L+L  N +    VE  QL   L  ++L+NN L   P E+      
Sbjct: 423 KSLPASIGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEVVIKGAH 482

Query: 301 RKLLLTGNPLRTLRSSLVNG 320
                  +    LRSS+V+G
Sbjct: 483 EICKYLKDNEAVLRSSVVSG 502



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 138/326 (42%), Gaps = 62/326 (19%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           LS  P ++ K       +   N       + C + +L VL LSNN ++ +P  I K + L
Sbjct: 28  LSEFPKQISK-CVCTNFNASQNDFTSIPEDVCLMPKLEVLTLSNNRITSIPDSIQKASNL 86

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           R+L L  N L                                    D I+   ++    +
Sbjct: 87  RELYLGQNNLFY----------------------------------DGISSEIKMCSNLQ 112

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L +    L +IP EI     +  L++S N+++ LPPE+     LQTL++++N I+  P 
Sbjct: 113 RLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPT 172

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS---------------- 464
            I  +L SL  L L NN +  +P +   ++  L+IL + +N  S                
Sbjct: 173 EI-GNLRSLYELDLSNNQMDLLPEE-LSNMIALKILRIGFNKLSGNIDVLTNFKFLVELD 230

Query: 465 ------LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-SLQSIPEGF 517
                 + E PP  SL +L  L ++ + +   P  +  L+ L  L++  N  ++ +PE  
Sbjct: 231 CQNNQGILELPPLDSLQNLTRLVVKNLPITNIP-GLSSLKMLCELNVRDNIKMKGMPEEI 289

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
            N+ SL  LD    NI+ LPP + S+
Sbjct: 290 FNIVSLQRLDFVGCNITVLPPNITSL 315


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 56/435 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 176 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 222

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 223 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 282

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 283 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 342

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 343 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 400

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 401 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 460

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 461 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 484

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N         L   S 
Sbjct: 485 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSK 544

Query: 429 LSCLKLDNNPLRQVP 443
           LS + ++N PL  +P
Sbjct: 545 LSIMSIENCPLSHLP 559



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 107 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 166

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 167 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 225

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 226 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 285

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 286 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 345

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 346 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 390

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 391 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 448

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 449 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 506

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 507 LLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 540



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 148 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 207

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 208 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 267

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 268 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 303

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 304 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 363

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 364 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 423

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 424 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 470

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 471 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 525

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 526 ----LNDNPNLHSLP 536



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 376 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 422

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 423 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 482

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 483 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC 542

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 543 SKLSIMSIENCPLSHLPPQIVAG 565



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 104 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 163

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 164 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 220

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 221 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 280

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 281 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 330


>gi|24650330|ref|NP_524754.2| scribbled, isoform D [Drosophila melanogaster]
 gi|51701662|sp|Q7KRY7.1|LAP4_DROME RecName: Full=Protein lap4; AltName: Full=Protein scribble;
           AltName: Full=Protein smell-impaired
 gi|23172361|gb|AAF56598.2| scribbled, isoform D [Drosophila melanogaster]
          Length = 1851

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 194/415 (46%), Gaps = 46/415 (11%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D++ L L  + +  L +++  L  L VLN+  N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           +G+L  L+ L++  N +  +P EIG    L   +   N+L  LP  +G+  NL +     
Sbjct: 90  VGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE++    K+  LD+EGN+LT                          P+ IG L
Sbjct: 150 NKLTILPEEIGQLQKLQILDLEGNQLTT------------------------FPKEIGKL 185

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  N++ ++   +    +L    + +N L+ LP E+G+L KL  L+L+  QLK
Sbjct: 186 QKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLK 245

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL+ L  L+L+   L+ LP EIG+++ L+KL L GN L TL   +        
Sbjct: 246 TLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQ 299

Query: 326 LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LK L+   L  N         E L  + T        L LE   ++  P EI +   + +
Sbjct: 300 LKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LHLESNQITTFPKEIGQLQNLQE 351

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+L  N +  LP E+    +LQ L L  N++   P  I      L  L L NNP+
Sbjct: 352 LNLGFNQLTTLPKEIGQLQNLQELNLKFNQLATLPKEI-GQQQKLRKLNLYNNPI 405



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 159/363 (43%), Gaps = 61/363 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +PNEV              +  +LQ L L  N +  L +++  L  L VL
Sbjct: 76  LNLGFNQLTTLPNEV-------------GQLQNLQVLNLYSNKLTILPKEIGKLRNLQVL 122

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ LP  +G+L  L+ L++  N +  +P+EIG    L   D   NQL   P  +
Sbjct: 123 NLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEI 182

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL---- 189
           G+   L       N +T+L E++     +  L++  N LT L    I     L EL    
Sbjct: 183 GKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKE-IGQLQKLQELNLYD 241

Query: 190 IASKNLLNG-------------------MPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           I  K L  G                   +P+ IG LS+L +L L+ N++ ++P  I    
Sbjct: 242 IQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 301

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-------------- 276
            L E Y+GNN L  LP E+ +L KL TL L SNQ+  +  E  QL+              
Sbjct: 302 KLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTT 361

Query: 277 ----------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                     L  L+L  N L+ LP EIG+   LRKL L  NP+ + +   +    P  +
Sbjct: 362 LPKEIGQLQNLQELNLKFNQLATLPKEIGQQQKLRKLNLYNNPIASEKIERIRKLLPKCI 421

Query: 327 KYL 329
            Y 
Sbjct: 422 IYF 424



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 19/331 (5%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L+ +++ ++   I    +L    +G N L+ LP E+G+L  L  L+L+SN+L     E
Sbjct: 53  LNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +LR L VL+L  N L+ LP E+G++  L++L L  N L  L   +  G    L     
Sbjct: 113 IGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEI--GQLQKL----- 165

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
            ++ + E ++ +T  ++ I    +L V    L+L    L+ +  E+ +   +  L+L  N
Sbjct: 166 -QILDLEGNQLTTFPKE-IGKLQKLQV----LNLGFNQLTTLREEVVQLQNLQILNLISN 219

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+     LQ L L   ++K  P  I+  L +L  L L+   L  +P +    +
Sbjct: 220 PLTTLPKEIGQLQKLQELNLYDIQLKTLPQGII-QLQNLRGLNLNYTHLTILPKE-IGQL 277

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L L  N + +LPE      L  LQELYL    LR  P +I +LQ+L+ L L  N 
Sbjct: 278 SKLQKLYLYGNQLTTLPEE--IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQ 335

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + + P+    L +L EL+L  N ++ LP E+
Sbjct: 336 ITTFPKEIGQLQNLQELNLGFNQLTTLPKEI 366



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 9/197 (4%)

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           LI  + +L   SKE          +   +    ++  L+L+ + +  L  E+    +LQ 
Sbjct: 20  LICFSCKLQAQSKETQ----TYRNLTEALQNPKDVRILNLNGSKLATLSKEIGKLQNLQV 75

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L  N++   P+ +   L +L  L L +N L  +P +    +  LQ+L+L +N +  LP
Sbjct: 76  LNLGFNQLTTLPNEV-GQLQNLQVLNLYSNKLTILPKE-IGKLRNLQVLNLGFNRLTILP 133

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +      L +LQEL L   +L   P +I +LQ+L+ILDL  N L + P+    L  L  L
Sbjct: 134 DE--VGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVL 191

Query: 527 DLSDNNISALPPELVSV 543
           +L  N ++ L  E+V +
Sbjct: 192 NLGFNQLTTLREEVVQL 208


>gi|386766579|ref|NP_001247322.1| scribbled, isoform R [Drosophila melanogaster]
 gi|383292971|gb|AFH06639.1| scribbled, isoform R [Drosophila melanogaster]
          Length = 1951

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|116007092|ref|NP_001014670.2| scribbled, isoform H [Drosophila melanogaster]
 gi|113194844|gb|AAX52995.2| scribbled, isoform H [Drosophila melanogaster]
          Length = 1939

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|195036246|ref|XP_001989582.1| GH18723 [Drosophila grimshawi]
 gi|193893778|gb|EDV92644.1| GH18723 [Drosophila grimshawi]
          Length = 1864

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTSLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N +      LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEM-GGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 176/370 (47%), Gaps = 38/370 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +TSLP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGRMTKLS----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QTLILSRNKI 415
             L +S N++
Sbjct: 362 HVLDVSGNQL 371



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 132/239 (55%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCDNMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I R+ +L  L++ +N+L+ +P      ++L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL 355



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ SLP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTSLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D ++++LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
 gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
          Length = 383

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 168/359 (46%), Gaps = 35/359 (9%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +SELP A   L  L+ L +S N + K+P+EIG+   L      SN L+ LP  + +   L
Sbjct: 24  ISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQL 83

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
                  N +  LP ++   + +  LDV  NKL  +    I   T LT L    N+L G+
Sbjct: 84  KKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAE-IGQLTSLTRLDLHTNVLKGL 142

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P TIG L+R+  L LH N++ S+P  I  C SL    +  N L  LP E+G+L+ L  L 
Sbjct: 143 PPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLS 202

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LH N+L+                       +PPE+G++T L  L L  N L  L   L  
Sbjct: 203 LHINELES----------------------VPPELGRLTGLEALSLHKNRLTRLPPEL-- 238

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
            P        R  L EN+  E      ++  +        +EL L    L+++PSE+   
Sbjct: 239 -PLGLAGSCCRLSLYENQLGEVPPELGNMGLL--------QELWLYSNQLTSVPSELGRL 289

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
           GE+ +L L RN +  LP E+S    LQ L L  N++ + P   L +L+ L  L L+ NP
Sbjct: 290 GELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSE-LGALTQLRRLYLEGNP 347



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 147/313 (46%), Gaps = 50/313 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS---------- 95
           DLQKL L++N + KL E++ NLP L  L +  N L  LP  + ++  LK           
Sbjct: 36  DLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVR 95

Query: 96  -------------LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                        LDVS N + ++  EIG  T+L + D  +N LK LP ++GR   +   
Sbjct: 96  LPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHL 155

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N + SLP D+  C+ +  L +  N+L  L    +   T L  L    N L  +P  
Sbjct: 156 SLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTE-MGELTGLVRLSLHINELESVPPE 214

Query: 203 IGSLSRLIRLDLHQNRILSIPSSI-----SGCCSLA--------------------EFYM 237
           +G L+ L  L LH+NR+  +P  +       CC L+                    E ++
Sbjct: 215 LGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWL 274

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
            +N L+++P+ELG+L +L  L L  NQL     E   L RL  L L +N L  LP E+G 
Sbjct: 275 YSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGA 334

Query: 297 MTTLRKLLLTGNP 309
           +T LR+L L GNP
Sbjct: 335 LTQLRRLYLEGNP 347



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 159/357 (44%), Gaps = 63/357 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N L  +PE IG+L +L  L L  N + S+P  ++    L + ++  N L  L
Sbjct: 37  LQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVRL 96

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           PAE+  ++ L  LD+  N+L+E C E  QL  L+ LDL  N L GLPP IG++T ++ L 
Sbjct: 97  PAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHLS 156

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L +L                                   I   T L      LSL
Sbjct: 157 LHFNQLESLPPD--------------------------------IGQCTSLVW----LSL 180

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L  +P+E+ E   + +L L  N ++ +PPEL     L+ L L +N++   P  +  
Sbjct: 181 NANQLKQLPTEMGELTGLVRLSLHINELESVPPELGRLTGLEALSLHKNRLTRLPPELPL 240

Query: 425 SLSSLSC-LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
            L+   C L L  N L +VP                         P   ++  LQEL+L 
Sbjct: 241 GLAGSCCRLSLYENQLGEVP-------------------------PELGNMGLLQELWLY 275

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             QL   P+++ RL +LR L L +N L S+P     LT L EL L  N +  LP EL
Sbjct: 276 SNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSEL 332



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            I+ LP  P F +LP LQ+L+L    LR+ P +I  L QL  L L  N L+S+P G   +
Sbjct: 23  GISELP--PAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQM 80

Query: 521 TSLTELDLSDNNISALPPELVSV 543
           T L +L L  N +  LP E+ ++
Sbjct: 81  TQLKKLWLPANMLVRLPAEVCAI 103


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 217/471 (46%), Gaps = 21/471 (4%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S+  L+ +P  + ++  L+ LDVS N +  IP+ +G    L + D   N L  LP +
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQA 77

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L+     +N +++LP  +    K++KL +  N+LT   +  + S   L  L  S
Sbjct: 78  IGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSG-VCSLPNLEVLEVS 136

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L   P  +  L +L  L ++ N++  +P  +    +L    + NN LS  P  + KL
Sbjct: 137 YNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVEKL 196

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L ++ NQL E     C L  L VL + NN+LS  PP + K+  LR+L + GN L 
Sbjct: 197 QKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLT 256

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            +   +   P    L      +  N  S      E L  +        +EL +    L+ 
Sbjct: 257 EVPPGVCLLPNIEWLS-----VSNNNLSTFPPGGEKLQKL--------RELYINDNQLTE 303

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +PS +     +  L + +N I+ LP  ++  A L+TL +   ++ ++P  +L  L +L  
Sbjct: 304 VPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVL-QLKTLEE 362

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREA 490
           L         VP D    +  L  L L  N+  +LP     S L +L+E+YL   +    
Sbjct: 363 LYAGGCKFDIVP-DEVGSLQHLWYLALDKNLLKTLPST--MSHLHNLREVYLDDNKFGTF 419

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           P  +  L  +  LD+S+N++  +P        L  LD+S N ++  PP+ V
Sbjct: 420 PEVLCELPAMEKLDISKNNITRLPTALHRADKLKHLDVSGNPLT-YPPQDV 469



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 199/446 (44%), Gaps = 37/446 (8%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           +K D S+  L  +P  +    +L     SNN +TS+PE +    K+ +LD + N LT L 
Sbjct: 16  LKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLP 75

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I S   LT L    N L+ +P  +  L +L +L +  N++   PS +    +L    
Sbjct: 76  QA-IGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLE 134

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N L   P  + KL KL TL ++ NQL E     C L  L VL +SNN LS  PP + 
Sbjct: 135 VSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVE 194

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L + GN L  + S + + P   +L    + L     S      E L  +    
Sbjct: 195 KLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNL-----STFPPGVEKLQKL---- 245

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               +EL + G  L+ +P  +     I  L +S N++   PP       L+ L ++ N++
Sbjct: 246 ----RELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQL 301

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPS------------------DGF-KDIPMLQIL 456
            + P  +  SL +L  L +  NP+R +P                   D F + +  L+ L
Sbjct: 302 TEVPSGV-CSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTL 360

Query: 457 DLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           +  Y      +  P    SL HL  L L +  L+  P+ +  L  LR + L  N   + P
Sbjct: 361 EELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFP 420

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           E    L ++ +LD+S NNI+ LP  L
Sbjct: 421 EVLCELPAMEKLDISKNNITRLPTAL 446



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 219/503 (43%), Gaps = 54/503 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 18  LDLSNQGLTSIPEEVF-------------DITDLEFLDVSNNKLTSIPEAVGRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  +N L+ LP AIG L  L  L +  N +  +P  +     L K    +NQL   PS +
Sbjct: 65  DADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGV 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL   + S N + + P  +    K+  L + GN+LT +    +     L  L  S 
Sbjct: 125 CSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPG-VCLLPNLEVLSVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +PS +    +L    + NN LS  P  + KL 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQ 243

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L ++ NQL E     C L  +  L +SNN+LS  PP   K+  LR+L +  N L  
Sbjct: 244 KLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTE 303

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + S + + P   +L   ++ +          +  D +T   RL    K LS+    L   
Sbjct: 304 VPSGVCSLPNLEVLGVGKNPI---------RSLPDYVTRLARL----KTLSVPNCQLDEF 350

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P ++ +   + +L         +P E+ S   L  L L +N +K  P + ++ L +L  +
Sbjct: 351 PRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLP-STMSHLHNLREV 409

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            LD+N     P +   ++P ++ LD+S N                         +   PT
Sbjct: 410 YLDDNKFGTFP-EVLCELPAMEKLDISKN------------------------NITRLPT 444

Query: 493 DILRLQQLRILDLSQNSLQSIPE 515
            + R  +L+ LD+S N L   P+
Sbjct: 445 ALHRADKLKHLDVSGNPLTYPPQ 467



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 172/403 (42%), Gaps = 79/403 (19%)

Query: 117  VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            +K D S+  L  +P  +    +L     SNN +TS+PE +    K+ +LD +GN LT L 
Sbjct: 927  LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSL- 985

Query: 177  NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
                                   P+ IGSL +LI L ++ N++  +PS +    +L    
Sbjct: 986  -----------------------PQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLN 1022

Query: 237  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
            + NN LS  P  + KL KLGTL         Y    C L  L VL + NN LS  PP + 
Sbjct: 1023 VYNNKLSTFPPGVEKLQKLGTL---------YINGVCLLPNLEVLSVGNNKLSTFPPGVE 1073

Query: 296  KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMA 352
            K+  LR+L +  N L  + S + + P   +L   ++   RLP            D +T  
Sbjct: 1074 KLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLP------------DYVTRL 1121

Query: 353  TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             RL    K LS+     +  P ++ +   + +L         +P E+ S   LQ L L +
Sbjct: 1122 ARL----KTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDK 1177

Query: 413  NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
            N +K  P + ++ L +L  + LD+N     P +   ++P ++ LD+S N           
Sbjct: 1178 NLLKTLP-STMSHLHNLREVYLDDNKFGTFP-EVLCELPAMEKLDISKN----------- 1224

Query: 473  SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                          +   PT + R  +L+ LD+S N L   P+
Sbjct: 1225 -------------NITRLPTALHRADKLKHLDVSGNPLTYPPQ 1254



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 164/375 (43%), Gaps = 47/375 (12%)

Query: 49   KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
            KL L++  +  + E++ ++  L VL+VS+NKL+ +P AIG L  L  LD   N +  +P 
Sbjct: 928  KLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQ 987

Query: 109  EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
             IGS   L+      NQL E+PS +    NL      NN +++ P  +    K+  L + 
Sbjct: 988  AIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYIN 1047

Query: 169  GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            G  + +L N        L  L    N L+  P  +  L +L  L +  N++  +PS +  
Sbjct: 1048 G--VCLLPN--------LEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCS 1097

Query: 229  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
              +L    +G N +  LP  + +L++L TL + + Q  E+  +  QL+ +  L       
Sbjct: 1098 LPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKF 1157

Query: 288  SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
              +P E+G +  L+ L L  N L+TL S++ +      L  LR                 
Sbjct: 1158 DIVPDEVGSLQHLQVLALDKNLLKTLPSTMSH------LHNLR----------------- 1194

Query: 348  LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                         E+ L+       P  + E   + KLD+S+N+I  LP  L     L+ 
Sbjct: 1195 -------------EVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRADKLKH 1241

Query: 408  LILSRNKIKDWPDAI 422
            L +S N +   P  +
Sbjct: 1242 LDVSGNPLTYPPQDV 1256



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 150/348 (43%), Gaps = 53/348 (15%)

Query: 196  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
            L  +PE +  ++ L  LD+  N++ SIP +I     L       N L++LP  +G L KL
Sbjct: 936  LTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKL 995

Query: 256  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
              L ++ NQL E     C L  L VL++ NN LS  PP + K+  L  L + G       
Sbjct: 996  IHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYING------- 1048

Query: 315  SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                                              + +   L V    LS+    LS  P 
Sbjct: 1049 ----------------------------------VCLLPNLEV----LSVGNNKLSTFPP 1070

Query: 375  EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
             + +  ++ +L +  N + E+P  + S  +L+ L + +N I+  PD + T L+ L  L +
Sbjct: 1071 GVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLPDYV-TRLARLKTLSV 1129

Query: 435  DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPT 492
             N    + P    + +  L+I++  Y      +  P    SL HLQ L L +  L+  P+
Sbjct: 1130 SNCQFAEFP----RQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPS 1185

Query: 493  DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             +  L  LR + L  N   + PE    L ++ +LD+S NNI+ LP  L
Sbjct: 1186 TMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTAL 1233



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 45/350 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+T+      ++LDL    + SIP  +     L    + NN L+++P  +G+L KL
Sbjct: 5   LNLQPQTVNGR---LKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKL 61

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD   N L         L +L+ L + +N LS LPP + K+  L KL +  N L    
Sbjct: 62  YRLDADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFP 121

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S + + P   +L+   ++LP                                      P 
Sbjct: 122 SGVCSLPNLEVLEVSYNKLPN------------------------------------FPP 145

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            + +  ++  L ++ N + E+PP +    +L+ L +S NK+  +P  +   L  L  L +
Sbjct: 146 VVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGV-EKLQKLRELYI 204

Query: 435 DNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N L +VPS G   +P L++L + + N+++ P  P    L  L+EL +   QL E P  
Sbjct: 205 YGNQLTEVPS-GVCSLPNLEVLSVYNNNLSTFP--PGVEKLQKLRELRIYGNQLTEVPPG 261

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +  L  +  L +S N+L + P G + L  L EL ++DN ++ +P  + S+
Sbjct: 262 VCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVPSGVCSL 311



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 61/386 (15%)

Query: 14   LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 929  LDLSNQGLTSIPEEVF-------------DITDLEVLDVSNNKLTSIPEAIGRLQKLYRL 975

Query: 74   NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +   N L+ LP AIG L  L  L +  N + ++P  + S   L   +  +N+L   P  +
Sbjct: 976  DADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGV 1035

Query: 134  ------------GRCL--NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
                        G CL  NL      NN +++ P  +    K+ +L +  N+LT + +  
Sbjct: 1036 EKLQKLGTLYINGVCLLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSG- 1094

Query: 180  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
            + S   L  L   KN +  +P+ +  L+RL  L +   +    P  +     + E Y G 
Sbjct: 1095 VCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGG 1154

Query: 240  NALSALPAELGKLSKLGTLDL-------------HSNQLKEYCVEA----------CQL- 275
                 +P E+G L  L  L L             H + L+E  ++           C+L 
Sbjct: 1155 CKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELP 1214

Query: 276  RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
             +  LD+S N+++ LP  + +   L+ L ++GNPL      +    T A++ +L+     
Sbjct: 1215 AMEKLDISKNNITRLPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLK----- 1269

Query: 336  NEDSEASTTKEDLITMATRLSVTSKE 361
                + +   E ++ +  RLSV + +
Sbjct: 1270 ----QEAEKDERILRVFNRLSVKASQ 1291



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 25/328 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +NN+      +  L  L  L +  N+L+E+P  +  L  ++ L VS N++  
Sbjct: 221 NLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLST 280

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P        L +   + NQL E+PS +    NL       N I SLP+ +   +++  L
Sbjct: 281 FPPGGEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTL 340

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V   +L      ++   T L EL A     + +P+ +GSL  L  L L +N + ++PS+
Sbjct: 341 SVPNCQLDEFPRQVLQLKT-LEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPST 399

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +S   +L E Y+ +N     P  L                       C+L  +  LD+S 
Sbjct: 400 MSHLHNLREVYLDDNKFGTFPEVL-----------------------CELPAMEKLDISK 436

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N+++ LP  + +   L+ L ++GNPL      +    T A++ +L+    ++E    +  
Sbjct: 437 NNITRLPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILRAFN 496

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAI 372
           +  +    T+    ++ L L    + AI
Sbjct: 497 RLSVKASQTQWKPLARSLGLSNRAMDAI 524



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 14/215 (6%)

Query: 46   DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            +L+ L +  N I +L + +  L  L  L+VS+ + +E P  + +L +++ L         
Sbjct: 1100 NLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDI 1159

Query: 106  IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +PDE+GS   L       N LK LPS++    NL +    +N   + PE L +   M KL
Sbjct: 1160 VPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKL 1219

Query: 166  DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-----GSLSRLIRLDLHQN-RI 219
            D+  N +T L   L  +   L  L  S N L   P+ +     G++   ++ +  ++ RI
Sbjct: 1220 DISKNNITRLPTALHRA-DKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERI 1278

Query: 220  LSIPSSISGCCSLAEFY-------MGNNALSALPA 247
            L + + +S   S  ++        + N A+ A+ A
Sbjct: 1279 LRVFNRLSVKASQTQWKPLARSLGLSNRAMDAIKA 1313



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)

Query: 361  ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            +L L    L++IP E+++  ++  LD+S N +  +P  +     L  L    N +   P 
Sbjct: 928  KLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQ 987

Query: 421  AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            AI  SL  L  L + +N L +VPS G   +P L++L++  N +++ P  P    L  L  
Sbjct: 988  AI-GSLQKLIHLYIYDNQLTEVPS-GVCSLPNLEVLNVYNNKLSTFP--PGVEKLQKLGT 1043

Query: 480  LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            LY+  + L         L  L +L +  N L + P G + L  L EL + DN ++ +P  
Sbjct: 1044 LYINGVCL---------LPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSG 1094

Query: 540  LVSV 543
            + S+
Sbjct: 1095 VCSL 1098



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 52/211 (24%)

Query: 354  RLSVTSKE---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
            RL+VTS +   ++L   N    P ++    ++ +   S+N   E  P    CA     + 
Sbjct: 836  RLAVTSGQRPDMTLVPTN----PPDVTSVSQLMQTCWSQNP--EDRPTFQECADRLLAVT 889

Query: 411  SRNKIKDWPDAILTSL----SSLSC------------LKLD--NNPLRQVPSDGFKDIPM 452
            SR+  +D   AI+  +    S+++             LKLD  N  L  +P + F DI  
Sbjct: 890  SRSSKEDILQAIIDVMKEKGSNMAAGLNLQPQTVNGRLKLDLSNQGLTSIPEEVF-DITD 948

Query: 453  LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
            L++LD+S N                        +L   P  I RLQ+L  LD   N L S
Sbjct: 949  LEVLDVSNN------------------------KLTSIPEAIGRLQKLYRLDADGNMLTS 984

Query: 513  IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +P+   +L  L  L + DN ++ +P  + S+
Sbjct: 985  LPQAIGSLQKLIHLYIYDNQLTEVPSGVCSL 1015


>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
 gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
          Length = 622

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 202/436 (46%), Gaps = 54/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 215 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITTVADDLRQLVNLTML 261

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 262 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 321

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +  +P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 322 GNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSR 381

Query: 194 NLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
           N     P T G    + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G
Sbjct: 382 NQFTSYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVG 440

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
               +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N 
Sbjct: 441 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 500

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  L   +       LL  L                              + L L+   +
Sbjct: 501 IEVLPHEI------GLLHEL------------------------------QRLILQTNQI 524

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P  +     +T L +S N++Q LP E+ S  SL+ L +++N   +     L    +L
Sbjct: 525 TMLPRSVGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 584

Query: 430 SCLKLDNNPLRQVPSD 445
             L +D  PL  +P +
Sbjct: 585 KYLNIDKCPLGTIPPE 600



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 221/453 (48%), Gaps = 20/453 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S +SI  +P+ +     L +    SN++ +LP+ +G  +NL +   + N +TSL
Sbjct: 143 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 202

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L  C+++  LD+  NKL  + + +I     LT L    N +  + + +  L  L  L
Sbjct: 203 PESLKHCTQLKVLDLRHNKLAEIPS-VIYRLRSLTTLYLRFNRITTVADDLRQLVNLTML 261

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  + S+I    +L    + +N L  LP ++G    L  LDL  N+L +     
Sbjct: 262 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 321

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L  L L  N L+ +P  +    ++ +  + GN +    + L +G   +L      
Sbjct: 322 GNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGI----TQLPDGMLASLSALTSI 377

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
            L  N+ +   T      T     +V S  ++LE   +  IP  I+  A  +TKL++  N
Sbjct: 378 TLSRNQFTSYPTGGPAQFT-----NVYS--INLEHNRIDKIPYGIFSRAKGLTKLNMKEN 430

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++
Sbjct: 431 MLTALPLDVGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNL 488

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ILDL  N I  LP       L  LQ L L+  Q+   P  +  L  L  L +S+N+
Sbjct: 489 RKLRILDLEENRIEVLPHE--IGLLHELQRLILQTNQITMLPRSVGHLSNLTHLSVSENN 546

Query: 510 LQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           LQ +PE   +L SL  L ++ N  +  LP EL 
Sbjct: 547 LQFLPEEIGSLESLENLYINQNPGLEKLPFELA 579


>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
           [Takifugu rubripes]
          Length = 582

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 197/395 (49%), Gaps = 45/395 (11%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I  +++D+R+L  LT+L++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T
Sbjct: 202 NRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCT 261

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            +   D   N+L +LP ++G   +++      N ++++P  LA C ++ +L++E N ++V
Sbjct: 262 KITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV 321

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCC 230
           L   L++S   LT L  ++N     P  +G     S +  L++  N I  IP  I S   
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNCINKIPFGIFSRAK 379

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
            L++  M +N L++LP + G  + +  L+L +NQL +   + C L  L VL LSNN L  
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKK 439

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  IG +  LR+L L  N L  L         P  + YL+                DL 
Sbjct: 440 LPHGIGNLRKLRELDLEENKLECL---------PNEIAYLK----------------DL- 473

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                     ++L L    L+ +P  I     +T L L  N +Q LP E+ +  +L+ L 
Sbjct: 474 ----------QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELY 523

Query: 410 LSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           L+ N  +   P   L   S LS + ++N PL  +P
Sbjct: 524 LNDNPNLHSLPFE-LALCSKLSIMSIENCPLSHLP 557



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 217/454 (47%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ LG   +L     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L    K+  LD+  NKL  +   ++   T LT L    N +  + + I  LS+L  L + 
Sbjct: 165 LDSLKKLQMLDLRHNKLREIPA-VVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   CSL    + +N L  LP E+G  +K+  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNL 283

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             ++ L L  N LS +P  + K   L +L L  N +  L     SSLV   +  L +   
Sbjct: 284 ASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QSYPVGGPSQFSTIYS---------------LNMEHNCINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ +   L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-CGLVSLEVLILSNNLLKKLP-HGIGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N +  LP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLECLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            LQ++PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLQNLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN ++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N + ++P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 155/352 (44%), Gaps = 37/352 (10%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P+SI     LAE Y+ +N L +LPAELG LS L TL L  N L    
Sbjct: 103 MRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLP 162

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L+ L +LDL +N L  +P  + ++TTL  L L  N + T+   + +     L K 
Sbjct: 163 DSLDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRH-----LSKL 217

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L ++ T        L +    L  +P EI    +IT LDL 
Sbjct: 218 TMLSIRENKIKQLPAEIGELCSLVT--------LDVAHNQLEHLPKEIGNCTKITNLDLQ 269

Query: 389 RNSIQELPPELSSCASLQTLILSRNK-----------------------IKDWPDAILTS 425
            N + +LP  + + AS+  L L  N+                       I   P+ +L+S
Sbjct: 270 HNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSS 329

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L  L+ L L  N  +  P  G      +  L++ +N  +      FS    L +L ++  
Sbjct: 330 LVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDN 389

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QL   P D      +  L+L+ N L  IPE    L SL  L LS+N +  LP
Sbjct: 390 QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLP 441



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N + +LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P+ I E  ++ +L L  N +Q LP EL   +SL TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L SL  L  L L +N LR++P+  ++   +  +      I ++ ++     L  L 
Sbjct: 162 PDS-LDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKD--IRHLSKLT 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPE 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLS 328


>gi|440894335|gb|ELR46812.1| hypothetical protein M91_11597 [Bos grunniens mutus]
          Length = 863

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 242/535 (45%), Gaps = 65/535 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK-EDLRNLPLLT 71
           ++NL  + L++ P ++ K                ++ L L  N I+  K  D R++  L 
Sbjct: 148 TINLKAKGLQEFPKDILK-------------VKYVKYLYLDENEIKSFKGADSRDMLGLE 194

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS LP+ I  LH LK L+VS+N I  IP EI     + +   ++N +++ PS
Sbjct: 195 ILSIQKNGLSTLPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPS 254

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L    NL     + N +  +P+ L+    +  L++E N+LT+       +   L +LI+
Sbjct: 255 GLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFP----KALCFLPKLIS 310

Query: 192 ---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
              + NL+N +P+ I  L  L +L L  N++  +   I     + E  + +N L  +  +
Sbjct: 311 LNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNK 370

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +    +L  L L  N LK+    +  C + L  L LS+N L+ LP  I K+  LRKL + 
Sbjct: 371 IENFKELRILILDKNLLKDMPENISHCAV-LECLSLSDNKLTELPKNIHKLKNLRKLHIN 429

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L  +         P  + +L +                              L   G
Sbjct: 430 RNYLVKI---------PEYISHLNNMFS---------------------------LEFSG 453

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             ++  P EI     I K++LS N I   P  L +  SL  L L+ N I + P  I  S 
Sbjct: 454 NFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYISEIPVDISFS- 512

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
             L  L+ + N L  + S+    +  L+ LDL  N I  +P  P  S++  L  L L   
Sbjct: 513 KQLLHLEFNENKLL-LFSEHLCSLINLEYLDLGKNKIRKIP--PSISNMVSLHVLILCYN 569

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L   PT++  L  LR+LDLS+N +Q+IP    NL  + +L++S+N     P EL
Sbjct: 570 KLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVEL 624



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 253/542 (46%), Gaps = 33/542 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S   +  +P E+     + G         ++++L L +N IE     L +L  L +L
Sbjct: 219 LNVSYNQISHIPKEI----SQLG---------NIKELFLNNNCIEDFPSGLESLKNLEIL 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  +P A+  L  L++L++ +N +   P  +     L+  + + N +  LP  +
Sbjct: 266 NLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    KM +L +  NKL V+SN  I ++  L  LI  K
Sbjct: 326 KELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNK-IENFKELRILILDK 384

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  MPE I   + L  L L  N++  +P +I    +L + ++  N L  +P  +  L+
Sbjct: 385 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 444

Query: 254 KLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            + +L+   N + ++ +E  +C+  ++ ++LS N +   P  +  + +L  L L GN + 
Sbjct: 445 NMFSLEFSGNFITDFPIEIKSCK-NIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYIS 503

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL----------SVTSKE 361
            +   +        L++  ++L    +   S    + + +               V+   
Sbjct: 504 EIPVDISFSKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHV 563

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L   P+E+     +  LDLS N IQ +P E+ +   +Q L +S N+   +P  
Sbjct: 564 LILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVE 623

Query: 422 I--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I  +P N     L  L 
Sbjct: 624 LCHLQSLEELNISQINGKKLTRLPEE-LSNMTKLKGLDISNNAIREMPTN--IGELRSLV 680

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L     Q+R  P+  L L  L+ L+LS N+L  +P G  NL SL E++  DN +   P 
Sbjct: 681 SLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPM 740

Query: 539 EL 540
           E+
Sbjct: 741 EI 742



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 184/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E++ +  +L  L++S NKL+ELP  I +L  L+ L ++ N ++K
Sbjct: 376 ELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVK 435

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I     +   + S N + + P  +  C N++  + S N I   P  L     +  L
Sbjct: 436 IPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYL 495

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN ++ +  ++  S  +L  L  ++N L    E + SL  L  LDL +N+I  IP S
Sbjct: 496 SLNGNYISEIPVDISFSKQLL-HLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPS 554

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS   SL    +  N L   P E+  L  L  LDL  NQ++    E C L+ +  L++SN
Sbjct: 555 ISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISN 614

Query: 285 NS--------------------------LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N                           L+ LP E+  MT L+ L ++ N +R +     
Sbjct: 615 NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREM----- 669

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIW 377
               P  +  LRS +  N D+            ++ LS+ + ++L+L G NLS +PS I+
Sbjct: 670 ----PTNIGELRSLVSLNADNNQIR-----YLPSSFLSLNALQQLNLSGNNLSVLPSGIY 720

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 721 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 753



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I K+   + N+  L VL + +NKL   P  +  L  L+ LD+S N I 
Sbjct: 536 INLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQ 595

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP EI +   + K + S+NQ    P  L    +L +   S      +T LPE+L++ +K
Sbjct: 596 TIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTK 655

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  N +  +  N I     L  L A  N +  +P +  SL+ L +L+L  N +  
Sbjct: 656 LKGLDISNNAIREMPTN-IGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSV 714

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 715 LPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751


>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
          Length = 581

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 104 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 163

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+LI L + 
Sbjct: 164 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIR 222

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G   ++  LDL  N+L +       L
Sbjct: 223 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGNL 282

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL----RTLRSSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N +     TL SSLV   +  L +   
Sbjct: 283 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLARNCF 342

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 343 QLYPMGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 387

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 388 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 445

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 446 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 503

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 504 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 537



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 209/434 (48%), Gaps = 54/434 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 173 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+   +   D   N+L +LP ++
Sbjct: 220 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 280 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLAR 339

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  S +  L++  NRI  IP  I S    L++  M +N L++LP + G 
Sbjct: 340 NCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 399

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N L
Sbjct: 400 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKL 459

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + YL+                DL           ++L L    L+
Sbjct: 460 ESL---------PNEIAYLK----------------DL-----------QKLVLTNNQLT 483

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSL 429
            +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S L
Sbjct: 484 TLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCSKL 542

Query: 430 SCLKLDNNPLRQVP 443
           S + ++N PL  +P
Sbjct: 543 SIMSIENCPLSHLP 556



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 145 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 204

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L+      N++K+LP+ +G   NL     ++N +  LP+++ +C +++ 
Sbjct: 205 TVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITN 264

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 265 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 300

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y +       ++  L+
Sbjct: 301 SLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLN 360

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 361 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 420

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 421 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 467

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 468 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 522

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 523 ----LNDNPNLHSLP 533



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 373 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 419

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 420 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 479

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 480 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 539

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 540 SKLSIMSIENCPLSHLPPQIVAG 562



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 101 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 160

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 161 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLI 217

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N   +T LDL  N       
Sbjct: 218 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPD 277

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 278 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLLS 327


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L ++P E+         GD       LQKLIL++N +EKL  ++  L  L  L
Sbjct: 89  LNLQQNKLTELPPEI---------GD----LTKLQKLILSNNQLEKLPPEIGKLTHLLEL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            VS N+L+ LP  IG+L  L+ L +  N ++ +P EIG    L +     NQL +LP+S+
Sbjct: 136 RVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     +NN +  LP ++     +    +  N+L  L    I +   L +L    
Sbjct: 196 GKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQE-ILTLQNLKKLYLVG 254

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  +  L +L  LDL +N    +P++I+   +L + ++ NN L++L AE+GKL 
Sbjct: 255 NQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQ 314

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  L L  N++ E       ++ L  L LS+N L+ LP EIG++  L+ L L  N L
Sbjct: 315 NLQILYLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 53/374 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D+  + LA+ ++  L + +     L VLN+  NKL+ELP  IG+L  L+ L +S N + K
Sbjct: 62  DVYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEK 121

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L++   S+N+L  LP  +G+  +L      NN + +LP ++   +++ +L
Sbjct: 122 LPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRL 181

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+LT L                        P +IG L+ L  L L+ NR+  +P  
Sbjct: 182 FLEHNQLTQL------------------------PASIGKLNNLQSLILNNNRVNQLPHE 217

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L  FY+ NN L  LP E+  L  L  L L  NQL++   +  +L +L +LDL  
Sbjct: 218 IGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQK 277

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N+ S +P  I K+T L+KL L  N L +L + +       +L      L EN+ +E  T+
Sbjct: 278 NNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQIL-----YLEENKITELPTS 332

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              + ++        K LSL    L+++P EI +  ++  L L  N   +LP +      
Sbjct: 333 IGSIQSL--------KHLSLSDNMLTSLPQEIGQLRKLQALYLRNN---QLPKD------ 375

Query: 405 LQTLILSRNKIKDW 418
                  + KIK+W
Sbjct: 376 ------EKAKIKEW 383



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 23/308 (7%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + N  +  L  ++ +   L  L+L  N+L E   E   L +L  L LSNN L  LPPEIG
Sbjct: 68  LANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIG 127

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+T L +L ++ N L TL   +  G   +L +YL   +P N+          LIT+   +
Sbjct: 128 KLTHLLELRVSANRLTTLPPEI--GKLQSL-QYLY--IPNNK----------LITLPPEI 172

Query: 356 SVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
              +  K L LE   L+ +P+ I +   +  L L+ N + +LP E+    +L T  L+ N
Sbjct: 173 GQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANN 232

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FS 472
           ++K+ P  ILT L +L  L L  N L+Q+P      +  LQILDL  N  +  E P   +
Sbjct: 233 RLKELPQEILT-LQNLKKLYLVGNQLQQLPPQ-LAKLDKLQILDLQKN--NFSEVPAAIT 288

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L +LQ+L+L   QL     +I +LQ L+IL L +N +  +P    ++ SL  L LSDN 
Sbjct: 289 KLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSDNM 348

Query: 533 ISALPPEL 540
           +++LP E+
Sbjct: 349 LTSLPQEI 356



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 45/358 (12%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +++M+K   ++   ++ +  +I     L   +   N+L ELP  +G    L     SNN 
Sbjct: 62  DVYMMK---LANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQ 118

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP ++   + + +L V  N+LT L                        P  IG L  
Sbjct: 119 LEKLPPEIGKLTHLLELRVSANRLTTL------------------------PPEIGKLQS 154

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L +  N+++++P  I     L   ++ +N L+ LPA +GKL+ L +L L++N++ + 
Sbjct: 155 LQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQL 214

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L    L+NN L  LP EI  +  L+KL L GN L+ L   L       +L 
Sbjct: 215 PHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILD 274

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                L +N  SE        IT  T L    ++L L    L+++ +EI +   +  L L
Sbjct: 275 -----LQKNNFSEVPAA----ITKLTNL----QKLWLNNNQLTSLNAEIGKLQNLQILYL 321

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
             N I ELP  + S  SL+ L LS N +   P  I   L  L  L L NN   Q+P D
Sbjct: 322 EENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEI-GQLRKLQALYLRNN---QLPKD 375



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 13/171 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +  L+N  L+++P E+                 +L+KL L  N +++L   L  L  L +
Sbjct: 226 TFYLANNRLKELPQEI-------------LTLQNLKKLYLVGNQLQQLPPQLAKLDKLQI 272

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N  SE+PAAI +L  L+ L ++ N +  +  EIG    L       N++ ELP+S
Sbjct: 273 LDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTS 332

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           +G   +L     S+N +TSLP+++    K+  L +  N+L       I  W
Sbjct: 333 IGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQLPKDEKAKIKEW 383



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           + L   ++  +  +I     +  L+L +N + ELPPE+     LQ LILS N+++  P  
Sbjct: 66  MKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPE 125

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L+ L  L++  N L  +P +  K +  LQ L +  N + +LP  P    L  L+ L
Sbjct: 126 I-GKLTHLLELRVSANRLTTLPPEIGK-LQSLQYLYIPNNKLITLP--PEIGQLAQLKRL 181

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L   QL + P  I +L  L+ L L+ N +  +P     L +L    L++N +  LP E+
Sbjct: 182 FLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEI 241

Query: 541 VSV 543
           +++
Sbjct: 242 LTL 244


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 17/320 (5%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKW----WEAVDLQKLIL-AHNNIEKLKEDLRNLPLLTVL 73
           R+ R +  E+   + EA + + W    WE   + +L L     I  L  ++  L  L+ L
Sbjct: 32  RTWRAMCPELQGRWPEAAQPEDWRGVKWENGRVVELELEGFGLIGALPAEIGRLNALSTL 91

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  LPA IG+L  L+ L++S N +  +P EIG  T+L +     NQL  +P+ +
Sbjct: 92  NLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAEI 151

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +   +   + SLP ++   + +  L+++ N LT +    I   T L EL    
Sbjct: 152 GQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAE-IGQLTSLRELHLGG 210

Query: 194 NL-LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N  L  +P  IG L+ L  LDL +N++ S P+ I    SL E ++ +N  +++PAE+G+L
Sbjct: 211 NWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L  NQL     E  QL  L  L L +N L+ +P E+G++T+L+KL L  N L 
Sbjct: 271 TSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLT 330

Query: 312 TLRSSLVNGPTPALLKYLRS 331
           ++         P +++ LR+
Sbjct: 331 SV---------PTVVRELRA 341



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 142/305 (46%), Gaps = 64/305 (20%)

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
           G   + ALPAE+G+L+ L TL+L SN+L+    E  QL  L  L+LS+N L+ +P EIG 
Sbjct: 71  GFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL 130

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +T+LR+L L  N L ++         PA +  L S                         
Sbjct: 131 LTSLRQLHLICNQLTSV---------PAEIGQLTSL------------------------ 157

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              KELSL G  L ++P+EIW+   +  L+L  N +  +P E+    SL+ L L  N   
Sbjct: 158 ---KELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGN--- 211

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
            W                    L  VP++    +  LQ+LDLS N + S P       L 
Sbjct: 212 -W-------------------RLTSVPAE-IGQLTSLQVLDLSRNQLTSAPAE--IGQLA 248

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L EL+L   Q    P +I +L  LR L L  N L S+P     LTSL EL L DN +++
Sbjct: 249 SLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTS 308

Query: 536 LPPEL 540
           +P E+
Sbjct: 309 VPAEM 313



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL++  LR +P E+ +                L++L L+ N +  +  ++  L  L  
Sbjct: 90  TLNLTSNKLRSLPAEIGQ-------------LTSLRRLELSSNQLTSVPAEIGLLTSLRQ 136

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ +PA IG+L  LK L ++   +  +P EI   T+L   +  +N L  +P+ 
Sbjct: 137 LHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAE 196

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G+  +L +     N  +TS+P ++   + +  LD+  N+LT      I     LTEL  
Sbjct: 197 IGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAE-IGQLASLTELFL 255

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N    +P  IG L+ L  L L  N++ S+PS I    SL E ++ +N L+++PAE+G+
Sbjct: 256 HDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQ 315

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR 276
           L+ L  L L  N L        +LR
Sbjct: 316 LTSLKKLYLRDNLLTSVPTVVRELR 340



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 17/295 (5%)

Query: 153 PEDLADC----SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           PED         ++ +L++EG  L       I     L+ L  + N L  +P  IG L+ 
Sbjct: 51  PEDWRGVKWENGRVVELELEGFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTS 110

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L  N++ S+P+ I    SL + ++  N L+++PAE+G+L+ L  L L   +L+  
Sbjct: 111 LRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSL 170

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PLRTLRSSLVNGPTPALL 326
             E  QL  L VL+L NN L+ +P EIG++T+LR+L L GN  L ++ + +    +  +L
Sbjct: 171 PAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVL 230

Query: 327 KYLRSRL---PENEDSEASTTK-----EDLITMATRLS-VTS-KELSLEGMNLSAIPSEI 376
              R++L   P      AS T+         ++   +  +TS +EL L G  L+++PSEI
Sbjct: 231 DLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEI 290

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
            +   + +L L  N +  +P E+    SL+ L L  N +   P  ++  L +  C
Sbjct: 291 GQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVP-TVVRELRAAGC 344


>gi|427798975|gb|JAA64939.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1144

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 35/346 (10%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLI 51
           D +L+ ART   L L    +RD+P  +++         N +E  +        ++L  L 
Sbjct: 30  DDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPADIANLMNLVDLD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I+++ E+++ L  L   + S N LS+LPA   +L  L  L ++  S+ ++P + G
Sbjct: 90  VSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFG 149

Query: 112 SATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           S + LV                       + D  SN  +ELP  +G+  +L +    +N 
Sbjct: 150 SLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNE 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +++LP+++    ++  LDV  NKL+ L + L      LT+L  S+N L  +PE IG L +
Sbjct: 210 LSTLPKEIGQLRRLMCLDVSENKLSHLPDEL-CDLESLTDLHFSQNYLESLPEDIGRLRK 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L    + QNR+ S+P SI  C SL E  + +N L+ LPA +G+L  L  L+   NQL E 
Sbjct: 269 LTIFKVDQNRLGSLPESIGDCVSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSEL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             E  QL RL VL L  N L  LPPE G +  L  L ++GN L+ L
Sbjct: 329 PPEIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNRLQNL 374



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 178/377 (47%), Gaps = 38/377 (10%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L++L+L  N+I  L   L  L  L  L+V+ N++S+LPA I  L  L  LDVS N I
Sbjct: 36  ARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPADIANLMNLVDLDVSKNDI 95

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +IP+ I    +L   D SSN L +LP+   +  +L+    ++  +T LP D    S + 
Sbjct: 96  QEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGSLSNLV 155

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L++                         +N L G+P +   L +L RLDL  N    +P
Sbjct: 156 SLELR------------------------ENYLKGLPLSFAFLVKLERLDLGSNDFEELP 191

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             +    SL E ++ +N LS LP E+G+L +L  LD+  N+L     E C L  L+ L  
Sbjct: 192 VVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHF 251

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S N L  LP +IG++  L    +  N L +L  S+  G   +L + +   L +N  +E  
Sbjct: 252 SQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESI--GDCVSLQELI---LTDNLLTELP 306

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   L+ +          L+ +   LS +P EI +   +  L L  N +Q LPPE  + 
Sbjct: 307 ASIGRLVNL--------NNLNADCNQLSELPPEIGQLVRLGVLSLRENCLQRLPPETGTL 358

Query: 403 ASLQTLILSRNKIKDWP 419
             L  L +S N++++ P
Sbjct: 359 RRLHVLDVSGNRLQNLP 375



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 183/379 (48%), Gaps = 19/379 (5%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  +D   + L  + ++++     L EL+   N +  +P  +  L++L RL ++ N I 
Sbjct: 14  QVEYIDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEIS 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +P+ I+   +L +  +  N +  +P  +  L  L + D  SN L +      QLR L+V
Sbjct: 74  QLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTV 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ LP + G ++ L  L L  N L+ L  S        L+K  R  L  N+  
Sbjct: 134 LGLNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFA-----FLVKLERLDLGSND-- 186

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 E+L  +  +LS + +EL L+   LS +P EI +   +  LD+S N +  LP EL
Sbjct: 187 -----FEELPVVVGQLS-SLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDEL 240

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
               SL  L  S+N ++  P+ I   L  L+  K+D N L  +P +   D   LQ L L+
Sbjct: 241 CDLESLTDLHFSQNYLESLPEDI-GRLRKLTIFKVDQNRLGSLP-ESIGDCVSLQELILT 298

Query: 460 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N+   LP +     L +L  L     QL E P +I +L +L +L L +N LQ +P    
Sbjct: 299 DNLLTELPAS--IGRLVNLNNLNADCNQLSELPPEIGQLVRLGVLSLRENCLQRLPPETG 356

Query: 519 NLTSLTELDLSDNNISALP 537
            L  L  LD+S N +  LP
Sbjct: 357 TLRRLHVLDVSGNRLQNLP 375



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 110/241 (45%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N+ E+L   +  L  L  L +  N+LS LP  IG+L  L  LDVS N + 
Sbjct: 175 VKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 234

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDE+    +L     S N L+ LP  +GR   L+ FK   N + SLPE + DC     
Sbjct: 235 HLPDELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDC----- 289

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                L ELI + NLL  +P +IG L  L  L+   N++  +P 
Sbjct: 290 -------------------VSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSELPP 330

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    +  N L  LP E G L +L  LD+  N+L+   +    L L  L L+ 
Sbjct: 331 EIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNRLQNLPLTVTALNLKALWLAK 390

Query: 285 N 285
           N
Sbjct: 391 N 391



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 5/150 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+  +   L  L  + N +E L ED+  L  LT+  V  N+L  LP +IG+   L+ L +
Sbjct: 238 DELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDCVSLQELIL 297

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N + ++P  IG    L   +   NQL ELP  +G+ + L       NC+  LP +   
Sbjct: 298 TDNLLTELPASIGRLVNLNNLNADCNQLSELPPEIGQLVRLGVLSLRENCLQRLPPETGT 357

Query: 159 CSKMSKLDVEGNK-----LTVLSNNLIASW 183
             ++  LDV GN+     LTV + NL A W
Sbjct: 358 LRRLHVLDVSGNRLQNLPLTVTALNLKALW 387



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 63/293 (21%)

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C  ++  +D  +++L  +P ++ +   TL +LLL  N +R L   L             
Sbjct: 10  GCNRQVEYIDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFR----------- 58

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                             +T   RLSV   E+S        +P++I     +  LD+S+N
Sbjct: 59  ------------------LTKLRRLSVNDNEIS-------QLPADIANLMNLVDLDVSKN 93

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----- 445
            IQE+P  +    SLQ+   S N +   P A    L SL+ L L++  L Q+P D     
Sbjct: 94  DIQEIPENIKYLKSLQSADFSSNPLSKLP-AGFVQLRSLTVLGLNDVSLTQLPHDFGSLS 152

Query: 446 ----------GFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
                       K +P+       L+ LDL  N    LP       L  LQEL+L   +L
Sbjct: 153 NLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVV--VGQLSSLQELWLDSNEL 210

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I +L++L  LD+S+N L  +P+   +L SLT+L  S N + +LP ++
Sbjct: 211 STLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDI 263



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 8/128 (6%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN---IASLPENPPFSSLP 475
           PD +L    +L  L LD N +R +P   F+   + ++  LS N   I+ LP +   ++L 
Sbjct: 29  PDDVLRYARTLEELLLDANHIRDLPRGLFR---LTKLRRLSVNDNEISQLPAD--IANLM 83

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +L +L + +  ++E P +I  L+ L+  D S N L  +P GF  L SLT L L+D +++ 
Sbjct: 84  NLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQ 143

Query: 536 LPPELVSV 543
           LP +  S+
Sbjct: 144 LPHDFGSL 151


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 168/341 (49%), Gaps = 38/341 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L  +L  L  L  LNVS N L+ LP  IG+L  L  L ++ N +  +P EIG   +L   
Sbjct: 21  LPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVL 80

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S NQL  LP+ +G    L +     N +TS+P ++   + + KL ++ N+LT +    
Sbjct: 81  DLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAE- 139

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I   T L  L  + N L  +P  IG L+ L    L  NR+ S+P+ I    SL E ++  
Sbjct: 140 IGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSG 199

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+++PAE+G+L+ L  L L  N+L     E  QL  L VL L +N L+ +P E+G++T
Sbjct: 200 NQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLT 259

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L+ L L GN L ++         PA +  L                    T+ T     
Sbjct: 260 SLKSLYLYGNQLTSV---------PAEIGQL--------------------TLLT----- 285

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             EL L+   L+++P+EI +   + KL L  N +  +P E+
Sbjct: 286 --ELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEI 324



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 152/286 (53%), Gaps = 11/286 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N +  +  ++  L  L VL++S N+L+ LPA IG L  L+ L +  N +  +
Sbjct: 54  LVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSV 113

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T+L K     N+L  +P+ +G+  +L     ++N +TS+P ++   + +++  
Sbjct: 114 PAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESG 173

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+L  +    I     LTEL  S N L  +P  IG L+ L  L L  N + S+P   
Sbjct: 174 LSGNRLASVPAE-IGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEET 232

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N L+++PAE+G+L+ L +L L+ NQL     E  QL  L+ L L +N
Sbjct: 233 GQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDN 292

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L+ +P EIG++ +L KL L  N L ++         PA ++ LR+
Sbjct: 293 ELTSVPAEIGQLRSLEKLYLDDNKLTSV---------PAEIRELRA 329



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 175/337 (51%), Gaps = 20/337 (5%)

Query: 207 SRLIRLDLHQ-NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            R++ LDL   +   ++P+ +    +L E  +  NAL+ LP E+G+L+ L  L L  NQL
Sbjct: 5   GRVVELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQL 64

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E  QL  L VLDLS+N L+ LP EIG +T L++L L GN L ++ + +       
Sbjct: 65  TSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQ----- 119

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
            L  LR  L +  D+E ++   + I   T L V    L L    L+++P+EI +   +T+
Sbjct: 120 -LTSLRKLLLD--DNELTSVPAE-IGQLTSLEV----LGLTDNQLTSVPAEIGQLASLTE 171

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
             LS N +  +P E+   ASL  L LS N++   P A +  L+SL  L LD+N L  VP 
Sbjct: 172 SGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVP-AEIGQLTSLQELWLDDNELTSVPE 230

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +  + +  L +L L  N + S+P       L  L+ LYL   QL   P +I +L  L  L
Sbjct: 231 ETGQ-LASLMVLSLRDNELTSVPAE--VGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTEL 287

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L  N L S+P     L SL +L L DN ++++P E+
Sbjct: 288 FLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEI 324



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 151/286 (52%), Gaps = 11/286 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L ++ N +  L  ++  L  L  L+++ N+L+ +PA IG+L  L+ LD+S N +  +
Sbjct: 31  LRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSL 90

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  TAL +     NQL  +P+ + +  +L      +N +TS+P ++   + +  L 
Sbjct: 91  PAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLG 150

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I     LTE   S N L  +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 151 LTDNQLTSVPAE-IGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEI 209

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL E ++ +N L+++P E G+L+ L  L L  N+L     E  QL  L  L L  N
Sbjct: 210 GQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGN 269

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L+ +P EIG++T L +L L  N L ++         PA +  LRS
Sbjct: 270 QLTSVPAEIGQLTLLTELFLDDNELTSV---------PAEIGQLRS 306



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L+KL+L  N +  +  ++  L  L VL ++ N+L+ +PA IG+L  L    +S N
Sbjct: 118 WQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGN 177

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG   +L +   S NQL  +P+ +G+  +L +    +N +TS+PE+    + 
Sbjct: 178 RLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLAS 237

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+LT +    +   T L  L    N L  +P  IG L+ L  L L  N + S
Sbjct: 238 LMVLSLRDNELTSVPAE-VGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTS 296

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           +P+ I    SL + Y+ +N L+++PAE+ +L   G
Sbjct: 297 VPAEIGQLRSLEKLYLDDNKLTSVPAEIRELRAAG 331


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSRLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LSRL  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSRLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSRLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 224/490 (45%), Gaps = 41/490 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L L+++++  L + +R    L  LN+ +N L ELP  + +L  L+ L +S N +  +
Sbjct: 74  VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P++I     L +     N+L+ LP++L     L+   A NN + S+PE L    ++  L 
Sbjct: 134 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L   L  + + L  L    N L  +PE +  L +L  L    N++  +P  I
Sbjct: 194 LDKNQLQYLPETLSGA-SALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQI 252

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  + +N L  LP  +G+L KL  L L  NQLK+      QL+ L  L L +N
Sbjct: 253 GSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSN 312

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP   G++T L  L L  N L +L S + N       K LR               
Sbjct: 313 QLTVLPINFGELTALENLYLNDNQLTSLPSGIGN------CKELR--------------- 351

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                          EL L    ++++P  +    ++ +L ++ N I  LP       +L
Sbjct: 352 ---------------ELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIANLPSSFGGLKNL 396

Query: 406 QTLILSRNKIKDW-PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           + L L+ NKI     D   +    LS + L+NN  +++P    +  P LQ L L  N+ S
Sbjct: 397 KLLYLTNNKINRLSKDLDCSGWKRLSAIYLENNAFQKLPK-ALETAPQLQTLYLDGNLIS 455

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
              +     +P ++ + L   QL E P D +    +R L L +N +  +PE  +   +L 
Sbjct: 456 EVNDSTIIKMPKIEHISLNDNQLSELP-DNMGSWPIRHLALERNGIMDLPESIRYFKNLE 514

Query: 525 ELDLSDNNIS 534
            LDL+ N I+
Sbjct: 515 LLDLAGNKIT 524



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 37/341 (10%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+ RLDL  + ++S+  SI     L    + NN L  LP         G  DL       
Sbjct: 73  RVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPD--------GLFDLPY----- 119

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                    L  L LSNN L  LP +I  +  LR+L + GN LR L ++L      A + 
Sbjct: 120 ---------LEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIA 170

Query: 328 YLRSRL---PEN-----EDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIW 377
              ++L   PE              K  L  +   LS  S  + L+++   L  +P  + 
Sbjct: 171 AENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALV 230

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++T L  + N +QELPP++ S  +L  L +  N+++  P++I   L  L  L+L++N
Sbjct: 231 YLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHNQLQRLPESI-GQLQKLELLRLEHN 289

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L+Q+P + F  +  L+ L L  N +  LP N  F  L  L+ LYL   QL   P+ I  
Sbjct: 290 QLKQLPKN-FGQLKALRKLYLDSNQLTVLPIN--FGELTALENLYLNDNQLTSLPSGIGN 346

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            ++LR L L+ N++ S+P+   +L  L EL ++DN I+ LP
Sbjct: 347 CKELRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIANLP 387


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ LIL +N +  L +++  L  L VL +++N+L+ LP  I +L  L+ LD+  N +  
Sbjct: 93  NLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTT 152

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL +   S+N +T LP+++     + + 
Sbjct: 153 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 212

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   +P  
Sbjct: 213 VLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE 271

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L+LS 
Sbjct: 272 IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE 331

Query: 285 NSLSGLPPEIGKMTTLR 301
           N L  +P EIG++  L+
Sbjct: 332 NQLKTIPQEIGQLQNLK 348



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 144/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T+LP+++     +  
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  ++LT+L    I     L EL  S N L  +P+ IG L  L R  L  N++  +P 
Sbjct: 166 LSLYESQLTILPQE-IGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L    L +NQ      E  QL+ L  L LS
Sbjct: 225 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L+  P EIGK+  L+ L L  N L TL
Sbjct: 285 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTL 314



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 154/337 (45%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT L    I     L  L  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKE-IGKLENLQLLSL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            ++ L  +P+ IG L  L  LDL  N++  +P  I    +L  F + NN L+ LP E+GK
Sbjct: 169 YESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L    L NN  + LP EIG++  L++L L+ N L
Sbjct: 229 LQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T    +        L+ L++                              L+L    L+
Sbjct: 289 TTFPKEI------GKLQKLQT------------------------------LNLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            +P EI +   +  L+LS N ++ +P E+    +L++
Sbjct: 313 TLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKS 349



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 158/335 (47%), Gaps = 50/335 (14%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L + ++ ++P  I    +L    +G+N L+ALP E+G+L  L  L L+ NQL     E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VL L+NN L+ LP EI ++  L+ L L  N L TL   +       LL    
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S+L                                    + +P EI +   + +LDLS N
Sbjct: 171 SQL------------------------------------TILPQEIGKLQNLHELDLSHN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ  +L  N++   P  I   L +L  L L +N L  +P    K+I
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEI-GKLQNLHELYLGHNQLTILP----KEI 249

Query: 451 PMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             LQ     +LD +     LP+      L +LQELYL   QL   P +I +LQ+L+ L+L
Sbjct: 250 GQLQNLQRFVLD-NNQFTILPKE--IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNL 306

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             N L ++PE  + L +L  L+LS+N +  +P E+
Sbjct: 307 WNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEI 341



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 153/337 (45%), Gaps = 42/337 (12%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIGK+  L+ L L  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           + L  L   +  G    L                                   EL L   
Sbjct: 171 SQLTILPQEI--GKLQNL----------------------------------HELDLSHN 194

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 253

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 254 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKE--IGKLQKLQTLNLWNNQ 310

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           L   P +I +L+ L+ L+LS+N L++IP+    L +L
Sbjct: 311 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + +LP+      L +LQ L L   QL   P +I +LQ L  LDLS N L  +P+ 
Sbjct: 145 LGNNQLTTLPKE--IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L    L +N ++ LP E+
Sbjct: 203 IGQLQNLQRFVLDNNQLTILPKEI 226


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 178/370 (48%), Gaps = 38/370 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L  G    + + +   L EN  SE   + 
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTL--GSCENMQELI---LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QTLILSRNKI 415
             L +S N++
Sbjct: 362 HVLDVSGNQL 371



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + S   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    S  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGSCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I R+ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LQRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|195574155|ref|XP_002105055.1| GD21289 [Drosophila simulans]
 gi|194200982|gb|EDX14558.1| GD21289 [Drosophila simulans]
          Length = 2647

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 191/427 (44%), Gaps = 49/427 (11%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            +   +QL  LP  + +  NL   +     +T+LP+++    K+  L++  N+L  L   
Sbjct: 55  LELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQE 114

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L EL   KN L  +P+ IG L  L +++L  NR++++P  I     L E Y+ 
Sbjct: 115 -IGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLE 173

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L+ LP E+GKL KL  L +  NQL     E  QL+ L  L L NN L+ LP +IG++
Sbjct: 174 KNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRL 233

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L+ N    L   +              +L E E                    
Sbjct: 234 QKLKLLFLSDNQFVILPKEI-------------GQLQELE-------------------- 260

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               LSL+   L+ +P  I +  ++  L LS N     P  +     L+ L LS N++  
Sbjct: 261 ---HLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAI 317

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLSYN---IASLPENPPFSS 473
             +  L  L  L  L L++N     P    K++  LQ L DL  N      LP+      
Sbjct: 318 LSEQSL-HLQKLEYLHLNHNRFTTFP----KEVQQLQNLKDLHLNGNQFTILPQG--IGQ 370

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L+ L+L   QL   P  I +LQ+L+ L L  N L  +P+G   L  L  L+LS+N +
Sbjct: 371 LQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQL 430

Query: 534 SALPPEL 540
           + LP E+
Sbjct: 431 TTLPKEI 437



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 189/444 (42%), Gaps = 46/444 (10%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N  Y N ++A         +D+  L L  + +  L +++  L  L  L +    L+ LP 
Sbjct: 36  NGTYYNLNKA-----LQNPLDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPK 90

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ L++S N ++ +P EIG    L +     NQL  LP  +GR  NL     S
Sbjct: 91  EIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLS 150

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + +LP ++    K+ +L +E N+LT L    I     L  L    N L  +PE +  
Sbjct: 151 NNRLVTLPREIGKLQKLKELYLEKNQLTTLPKE-IGKLKKLKNLYICDNQLTILPEEVIQ 209

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L L  N++ ++P  I     L   ++ +N    LP E+G+L +L  L L  NQL
Sbjct: 210 LQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQL 269

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                   +L +L  L LSNN     P  IG++  L+ L L+ N L  L           
Sbjct: 270 ATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAIL----------- 318

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                         SE S   + L           + L L     +  P E+ +   +  
Sbjct: 319 --------------SEQSLHLQKL-----------EYLHLNHNRFTTFPKEVQQLQNLKD 353

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L+ N    LP  +     L+ L L  N++   P  I   L  L  L LDNN L  +P 
Sbjct: 354 LHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQGI-GKLQKLKELSLDNNQLTILPK 412

Query: 445 DGFKDIPMLQILDLSYN-IASLPE 467
            G   +  L+ L+LS N + +LP+
Sbjct: 413 -GIGKLQKLEYLNLSNNQLTTLPK 435



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 126/264 (47%), Gaps = 2/264 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L +  N +  L E++  L  L  L++ +N+L+ LP  IG L  LK L +S N  + +
Sbjct: 190 LKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVIL 249

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L       NQL  LP  +G+   L +   SNN     P+ +    K+  L 
Sbjct: 250 PKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALY 309

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +LS   +     L  L  + N     P+ +  L  L  L L+ N+   +P  I
Sbjct: 310 LSDNQLAILSEQSL-HLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L   ++ NN L+ LP  +GKL KL  L L +NQL        +L +L  L+LSNN
Sbjct: 369 GQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNP 309
            L+ LP EI K+  L  L L G P
Sbjct: 429 QLTTLPKEIRKLQNLHFLGLEGMP 452



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)

Query: 43  EAVDLQKL---ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           +++ LQKL    L HN      ++++ L  L  L+++ N+ + LP  IG+L  L+ L + 
Sbjct: 321 QSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLD 380

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P  IG    L +    +NQL  LP  +G+   L     SNN +T+LP+++   
Sbjct: 381 NNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEIRKL 440

Query: 160 SKMSKLDVEG--------NKLTVLSNNL 179
             +  L +EG        NK+ +L  NL
Sbjct: 441 QNLHFLGLEGMPALNSQKNKIEILFPNL 468



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 26/182 (14%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L+ +P EI +   +  L L   ++  LP E+     L+ L LS N++   P  
Sbjct: 55  LELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQE 114

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           I   L  L  L L+ N L  +P    K+I  LQ                     +LQ++ 
Sbjct: 115 I-GQLQKLKELSLEKNQLTTLP----KEIGRLQ---------------------NLQKIN 148

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L   +L   P +I +LQ+L+ L L +N L ++P+    L  L  L + DN ++ LP E++
Sbjct: 149 LSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVI 208

Query: 542 SV 543
            +
Sbjct: 209 QL 210


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L +  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                D+           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DI-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 221/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++  KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLGKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  +Q+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDIQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               +Q L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDIQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+  G LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLGKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     + K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|440789611|gb|ELR10917.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 911

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 208/472 (44%), Gaps = 90/472 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S +L  + L  VP+ V             WE  +L  L L  N IE L  DL  L  L  
Sbjct: 457 SYDLRRKELTAVPSNV-------------WEMKNLSVLNLYMNKIESLPPDLGKLTKLKA 503

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N L  LP  +G+L  L  LD+ +N + ++P  I     L K     N+L++LP  
Sbjct: 504 LGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEE 563

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--------------- 177
           +G  ++L      NN +  LP  L+  + +  LD+  N LT   +               
Sbjct: 564 IGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQN 623

Query: 178 ---NLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLH---------------- 215
               L   W  LT+L+    S+N L   P TI  L RL  LDL                 
Sbjct: 624 KLTTLQGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGNMTSLRSLY 683

Query: 216 --QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
             +N+++++P+ +     L E ++  N L A+P EL  L  L  LDL +N+ + +    C
Sbjct: 684 LGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARC 743

Query: 274 -QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+ L++S+N +  L  +IG +TTL++L L  N L                     R
Sbjct: 744 FPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQL--------------------DR 783

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           LP     E S     L+T  T L V   E       L  +P EI +   I +L L  N +
Sbjct: 784 LP----GEIS-----LLTGLTELRVGYNE-------LLTLPHEIGDISLIKQLHLEHNKM 827

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
            ELP  + + ++L+  +++ N + D P+ ++ +++SLS LK+D NP   +P+
Sbjct: 828 VELPKSIGNLSALELFVVTDNLLNDLPNEMV-NMTSLSELKVDGNPFDNLPA 878



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 203/436 (46%), Gaps = 17/436 (3%)

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           GSA  L  +D    +L  +PS++    NLS      N I SLP DL   +K+  L +  N
Sbjct: 450 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 509

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L N L    T LT L    N L  +P TI  L  L +L L  NR+  +P  I    
Sbjct: 510 SLRTLPNEL-GQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLV 568

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEA-CQLRLSVLDLSNNSLS 288
           SL    + NN L  LP +L   + L  LD+ +N L ++  VE  CQL+   LDL  N L+
Sbjct: 569 SLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLK--DLDLKQNKLT 626

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTT-- 344
            L    G +T L +L ++ N L     ++   P    L  L    PE  N  S  S    
Sbjct: 627 TLQGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLD-LEVLAPEIGNMTSLRSLYLG 685

Query: 345 KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           +  LI +   L + +  +EL L+G  L AIP E+     +  LDLS N  Q  P      
Sbjct: 686 RNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFP 745

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
            +L +L +S N++K   + I  +L++L  L LD N L ++P +    +  L  L + YN 
Sbjct: 746 PALNSLNMSDNQMKRLSNQI-GALTTLKQLNLDENQLDRLPGE-ISLLTGLTELRVGYNE 803

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           + +LP       +  +++L+L   ++ E P  I  L  L +  ++ N L  +P    N+T
Sbjct: 804 LLTLPHE--IGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMT 861

Query: 522 SLTELDLSDNNISALP 537
           SL+EL +  N    LP
Sbjct: 862 SLSELKVDGNPFDNLP 877



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 187/402 (46%), Gaps = 48/402 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N++  L  +L  L  LT+L++ +NKL+ELPA I  L  L  L + +N + ++
Sbjct: 501 LKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 560

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG   +L      +NQL +LP  L    NL     S N +T     +    ++  LD
Sbjct: 561 PEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLD 619

Query: 167 VEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLH-------- 215
           ++ NKLT L       W  LT+L+    S+N L   P TI  L RL  LDL         
Sbjct: 620 LKQNKLTTLQ----GGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGN 675

Query: 216 ----------QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
                     +N+++++P+ +     L E ++  N L A+P EL  L  L  LDL +N+ 
Sbjct: 676 MTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEF 735

Query: 266 KEYCVEAC-QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS--SLVNGPT 322
           + +    C    L+ L++S+N +  L  +IG +TTL++L L  N L  L    SL+ G T
Sbjct: 736 QTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLT 795

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 380
              + Y                  +L+T+   +   S  K+L LE   +  +P  I    
Sbjct: 796 ELRVGY-----------------NELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLS 838

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +    ++ N + +LP E+ +  SL  L +  N   + P A+
Sbjct: 839 ALELFVVTDNLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAV 880



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
           S   L    L    L  VPS+ + ++  L +L+L  N I SLP  P    L  L+ L L 
Sbjct: 451 SAGGLQSYDLRRKELTAVPSNVW-EMKNLSVLNLYMNKIESLP--PDLGKLTKLKALGLN 507

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              LR  P ++ +L  L +LDL  N L  +P   K+L  L +L L  N +  LP E+
Sbjct: 508 ENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEI 564



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           S+ E+    S   LQ   LRR +L   P+++  ++ L +L+L  N ++S+P     LT L
Sbjct: 442 SMAEDSGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKL 501

Query: 524 TELDLSDNNISALPPEL 540
             L L++N++  LP EL
Sbjct: 502 KALGLNENSLRTLPNEL 518


>gi|428169759|gb|EKX38690.1| hypothetical protein GUITHDRAFT_76958, partial [Guillardia theta
           CCMP2712]
          Length = 551

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 174/535 (32%), Positives = 254/535 (47%), Gaps = 46/535 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L +SN +   VP  V  N               LQ L L+ N I     ++ +L  L  L
Sbjct: 47  LQISNSNAYLVPAGVLNNL------------TSLQSLDLSTNKIATFPAEISSLTRLRFL 94

Query: 74  NVSHNKLSELPAA-IGELHMLKSLDVSFNSIMKIP-DEIGSATALVKFDCSSNQLKELPS 131
           +++ N+L+ +P     +L  L  LD+S N +  IP     + T+L     SSNQL   P+
Sbjct: 95  HLASNRLTSIPGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSSNQLASFPT 154

Query: 132 SLGRCLNLSDFKA---SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
             G   NL   +    S+N + ++P D++  + ++ L + GN+LT +     ++   LT 
Sbjct: 155 --GTFTNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTS 212

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPA 247
           L  S N L  +P  I S+  LI L    N++ +IPS   SG  SL    + +N L++LPA
Sbjct: 213 LDLSSNELTSLPSGILSIRSLIFLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPA 272

Query: 248 EL-GKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            L   L  L +L L SNQL  +          L  LDLS+N L  +P +I  +TTL  L 
Sbjct: 273 GLFANLIILDSLSLASNQLASFSAGFFSTLNSLKTLDLSSNQLKAIPADISTLTTLTTLK 332

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L+GN L T+ +   +     ++      L  NE +   +  + L  + T        L L
Sbjct: 333 LSGNQLTTIPTGFFSN----MMSLTSLDLSSNELTSLPSGTQ-LTGLGT--------LKL 379

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI---LSRNKIKDWPDA 421
             + L+ +P EI     +  LDLS N +  +P    S  SLQTL    LSRN +   P  
Sbjct: 380 ASLQLTTVPVEILSMKRLATLDLSSNKLASIPANFFS--SLQTLTFLDLSRNYLVSLPVG 437

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +SL  L+ L L  N L  +P DG   +  L+ LDLS N + SLP    F++L  L++L
Sbjct: 438 I-SSLKGLTTLHLSGNQLASIP-DGVLSLTNLKNLDLSSNKLQSLPAGT-FTNLSSLEDL 494

Query: 481 YLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            L   QL   P      L+ L  LDLS N   S+P G ++LTSL  L L +N IS
Sbjct: 495 SLSSNQLASLPPGFFATLRSLTTLDLSNNKFTSLPPGIESLTSLKYLYLQNNLIS 549



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 151/472 (31%), Positives = 218/472 (46%), Gaps = 44/472 (9%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           L +S++    +PA +   L  L+SLD+S N I   P EI S T L     +SN+L  +P 
Sbjct: 47  LQISNSNAYLVPAGVLNNLTSLQSLDLSTNKIATFPAEISSLTRLRFLHLASNRLTSIPG 106

Query: 132 -SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            S  + + L+    S N +TS+P    D                 S+N +AS+       
Sbjct: 107 GSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSL-------SSNQLASFPT----- 154

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AEL 249
                      T  +L RL ++DL  N++ +IP+ IS   +L    +  N L+ +P    
Sbjct: 155 ----------GTFTNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFF 204

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTG 307
             +  L +LDL SN+L         +R L  L  S N L+ +P      + +L++L L+ 
Sbjct: 205 SNMMSLTSLDLSSNELTSLPSGILSIRSLIFLYASGNQLTAIPSGFFSGLNSLQRLDLSS 264

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L +L + L      A L  L S L    +  AS +     T+ +      K L L   
Sbjct: 265 NKLTSLPAGLF-----ANLIILDS-LSLASNQLASFSAGFFSTLNSL-----KTLDLSSN 313

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSL 426
            L AIP++I     +T L LS N +  +P    S+  SL +L LS N++   P    T L
Sbjct: 314 QLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSG--TQL 371

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           + L  LKL +  L  VP +    +  L  LDLS N +AS+P N  FSSL  L  L L R 
Sbjct: 372 TGLGTLKLASLQLTTVPVE-ILSMKRLATLDLSSNKLASIPANF-FSSLQTLTFLDLSRN 429

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L   P  I  L+ L  L LS N L SIP+G  +LT+L  LDLS N + +LP
Sbjct: 430 YLVSLPVGISSLKGLTTLHLSGNQLASIPDGVLSLTNLKNLDLSSNKLQSLP 481



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 189/389 (48%), Gaps = 19/389 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM-LKSLDVSFNSIMK 105
           L+++ L+ N ++ +  D+  L  LT L +S N+L+ +P       M L SLD+S N +  
Sbjct: 163 LEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSSNELTS 222

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDL-ADCSKMS 163
           +P  I S  +L+    S NQL  +PS     LN L     S+N +TSLP  L A+   + 
Sbjct: 223 LPSGILSIRSLIFLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPAGLFANLIILD 282

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L +  N+L   S    ++   L  L  S N L  +P  I +L+ L  L L  N++ +IP
Sbjct: 283 SLSLASNQLASFSAGFFSTLNSLKTLDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIP 342

Query: 224 SSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           +   S   SL    + +N L++LP+   +L+ LGTL L S QL    VE   + RL+ LD
Sbjct: 343 TGFFSNMMSLTSLDLSSNELTSLPSG-TQLTGLGTLKLASLQLTTVPVEILSMKRLATLD 401

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPEN- 336
           LS+N L+ +P      + TL  L L+ N L +L    SSL    T  L     + +P+  
Sbjct: 402 LSSNKLASIPANFFSSLQTLTFLDLSRNYLVSLPVGISSLKGLTTLHLSGNQLASIPDGV 461

Query: 337 ------EDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEA-GEITKLDLS 388
                 ++ + S+ K   +   T  +++S E      N L+++P   +     +T LDLS
Sbjct: 462 LSLTNLKNLDLSSNKLQSLPAGTFTNLSSLEDLSLSSNQLASLPPGFFATLRSLTTLDLS 521

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKD 417
            N    LPP + S  SL+ L L  N I +
Sbjct: 522 NNKFTSLPPGIESLTSLKYLYLQNNLISN 550



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPELS 400
           S +   ++T     + +   L +   N   +P+ +      +  LDLS N I   P E+S
Sbjct: 27  SVSNSGVVTRQGNCAYSCINLQISNSNAYLVPAGVLNNLTSLQSLDLSTNKIATFPAEIS 86

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
           S   L+ L L+ N++   P      L  L+ L L  N L  +P   F  +  L  L LS 
Sbjct: 87  SLTRLRFLHLASNRLTSIPGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSS 146

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FK 518
           N +AS P    F++L  L+++ L   QL+  P DI  L  L  L LS N L +IP G F 
Sbjct: 147 NQLASFPTGT-FTNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFS 205

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
           N+ SLT LDLS N +++LP  ++S+
Sbjct: 206 NMMSLTSLDLSSNELTSLPSGILSI 230


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 175/357 (49%), Gaps = 41/357 (11%)

Query: 1   MDRILKAARTSGSL-NLSNR-------SLRDVPNEV---------YKNFDEAGEGDKW-W 42
           +DRI +A     +L +LSN+        L ++P EV         Y N++      ++ +
Sbjct: 9   LDRIQQAKEKRLTLLDLSNKWDTKEEYKLTEIPEEVFELEWLEVLYLNYNNLSCISEYIY 68

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
             ++L++L L  NN+  L   + +L  LT L++SHN+L+ LP ++  L  L  LD+SFN 
Sbjct: 69  CLINLKELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQ 128

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD +     L   D   NQL  LP SL R +NL+      N +TSLP+ L     +
Sbjct: 129 LTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNL 188

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L +  N+L+ L N+L      LTEL  S N L  +P+++  L  L  LDL  N++ S 
Sbjct: 189 IYLYLGRNQLSSLLNSL-TRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSF 247

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P S++   +L E Y+  N LS+LP  L +L+K                      LS L+L
Sbjct: 248 PDSLTSLVNLTELYLTGNQLSSLPDSLTRLAK----------------------LSRLNL 285

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           S N LS LP  + ++  L  L L GNPL T    +      A+ +Y R +  E ED+
Sbjct: 286 SRNQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEIAQQGIEAIREYFRQKQQEGEDT 342



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 102/185 (55%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL L   NL+ + + I +   +TKLDLS N +  LP  L+   +L  L LS N++   P
Sbjct: 74  KELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLP 133

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D+ LT L +L+ L L  N L  +P D    +  L  LDL  N + SLP++   + L +L 
Sbjct: 134 DS-LTRLVNLTYLDLRGNQLTSLP-DSLTRLVNLTYLDLRGNQLTSLPDS--LTRLVNLI 189

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LYL R QL      + RL  L  LDLS N L S+P+    L +LTELDLSDN +S+ P 
Sbjct: 190 YLYLGRNQLSSLLNSLTRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPD 249

Query: 539 ELVSV 543
            L S+
Sbjct: 250 SLTSL 254



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 156/362 (43%), Gaps = 55/362 (15%)

Query: 196 LNGMPETI------GSLSRLIRLDL-------HQNRILSIPSSISGCCSLAEFYMGNNAL 242
           +N +PE            RL  LDL        + ++  IP  +     L   Y+  N L
Sbjct: 1   MNNIPEYFLDRIQQAKEKRLTLLDLSNKWDTKEEYKLTEIPEEVFELEWLEVLYLNYNNL 60

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           S +   +  L  L  L L+ N L         L  L+ LDLS+N L+ LP  +  +  L 
Sbjct: 61  SCISEYIYCLINLKELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHLVNLT 120

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           KL L+ N L +L  SL                                   TRL V    
Sbjct: 121 KLDLSFNQLTSLPDSL-----------------------------------TRL-VNLTY 144

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L G  L+++P  +     +T LDL  N +  LP  L+   +L  L L RN++    ++
Sbjct: 145 LDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSSLLNS 204

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
            LT L +L+ L L  N L  +P D    +  L  LDLS N ++S P++   +SL +L EL
Sbjct: 205 -LTRLVNLTELDLSFNQLTSLP-DSLTPLVNLTELDLSDNQLSSFPDS--LTSLVNLTEL 260

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YL   QL   P  + RL +L  L+LS+N L ++P+    L +LT L L  N +   P E+
Sbjct: 261 YLTGNQLSSLPDSLTRLAKLSRLNLSRNQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEI 320

Query: 541 VS 542
             
Sbjct: 321 AQ 322


>gi|329664308|ref|NP_001192376.1| leucine-rich repeat and death domain-containing protein 1 [Bos
           taurus]
 gi|296488711|tpg|DAA30824.1| TPA: leucine-rich repeat and death domain-containing protein-like
           [Bos taurus]
          Length = 863

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 242/535 (45%), Gaps = 65/535 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK-EDLRNLPLLT 71
           ++NL  + L++ P ++ K                ++ L L  N I+  K  D R++  L 
Sbjct: 148 TINLKAKGLQEFPKDILK-------------VKYVKYLYLDENEIKSFKGADSRDMLGLE 194

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS LP+ I  LH LK L+VS+N I  IP EI     + +   ++N +++ PS
Sbjct: 195 ILSIQKNGLSTLPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPS 254

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L    NL     + N +  +P+ L+    +  L++E N+LT+       +   L +LI+
Sbjct: 255 GLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFP----KALCFLPKLIS 310

Query: 192 ---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
              + NL+N +P+ I  L  L +L L  N++  +   I     + E  + +N L  +  +
Sbjct: 311 LNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNK 370

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +    +L  L L  N LK+    +  C + L  L LS+N L+ LP  I K+  LRKL + 
Sbjct: 371 IENFKELRILILDKNLLKDMPENISHCAV-LECLSLSDNKLTELPKNIHKLKNLRKLHIN 429

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L  +         P  + +L +                              L   G
Sbjct: 430 RNYLVKI---------PEYISHLNNMFS---------------------------LEFSG 453

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             ++  P EI     I K++LS N I   P  L +  SL  L L+ N I + P  I  + 
Sbjct: 454 NFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYLSLNGNYISEIPVDISFN- 512

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
             L  L+ + N L  + S+    +  L+ LDL  N I  +P  P  S++  L  L L   
Sbjct: 513 KQLLHLEFNENKLL-LFSEHLCSLINLEYLDLGKNKIRKIP--PSISNMVSLHVLILCYN 569

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L   PT++  L  LR+LDLS+N +Q+IP    NL  + +L++S+N     P EL
Sbjct: 570 KLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVEL 624



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 253/542 (46%), Gaps = 33/542 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S   +  +P E+     + G         ++++L L +N IE     L +L  L +L
Sbjct: 219 LNVSYNQISHIPKEI----SQLG---------NIKELFLNNNCIEDFPSGLESLKNLEIL 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  +P A+  L  L++L++ +N +   P  +     L+  + + N +  LP  +
Sbjct: 266 NLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    KM +L +  NKL V+SN  I ++  L  LI  K
Sbjct: 326 KELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNK-IENFKELRILILDK 384

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  MPE I   + L  L L  N++  +P +I    +L + ++  N L  +P  +  L+
Sbjct: 385 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 444

Query: 254 KLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            + +L+   N + ++ +E  +C+  ++ ++LS N +   P  +  + +L  L L GN + 
Sbjct: 445 NMFSLEFSGNFITDFPIEIKSCK-NIAKVELSYNKIMYFPLGLCALDSLHYLSLNGNYIS 503

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL----------SVTSKE 361
            +   +        L++  ++L    +   S    + + +               V+   
Sbjct: 504 EIPVDISFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHV 563

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L   P+E+     +  LDLS N IQ +P E+ +   +Q L +S N+   +P  
Sbjct: 564 LILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVE 623

Query: 422 I--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I  +P N     L  L 
Sbjct: 624 LCHLQSLEELNISQINGKKLTRLPEE-LSNMTKLKGLDISNNAIREMPTN--IGELRSLV 680

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L     Q+R  P+  L L  L+ L+LS N+L  +P G  NL SL E++  DN +   P 
Sbjct: 681 SLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPM 740

Query: 539 EL 540
           E+
Sbjct: 741 EI 742



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E++ +  +L  L++S NKL+ELP  I +L  L+ L ++ N ++K
Sbjct: 376 ELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVK 435

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I     +   + S N + + P  +  C N++  + S N I   P  L     +  L
Sbjct: 436 IPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYL 495

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN ++ +  + I+    L  L  ++N L    E + SL  L  LDL +N+I  IP S
Sbjct: 496 SLNGNYISEIPVD-ISFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPS 554

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS   SL    +  N L   P E+  L  L  LDL  NQ++    E C L+ +  L++SN
Sbjct: 555 ISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISN 614

Query: 285 NS--------------------------LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N                           L+ LP E+  MT L+ L ++ N +R +     
Sbjct: 615 NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREM----- 669

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIW 377
               P  +  LRS +  N D+            ++ LS+ + ++L+L G NLS +PS I+
Sbjct: 670 ----PTNIGELRSLVSLNADNNQIR-----YLPSSFLSLNALQQLNLSGNNLSVLPSGIY 720

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 721 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 753



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I K+   + N+  L VL + +NKL   P  +  L  L+ LD+S N I 
Sbjct: 536 INLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQ 595

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP EI +   + K + S+NQ    P  L    +L +   S      +T LPE+L++ +K
Sbjct: 596 TIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTK 655

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  N +  +  N I     L  L A  N +  +P +  SL+ L +L+L  N +  
Sbjct: 656 LKGLDISNNAIREMPTN-IGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSV 714

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 715 LPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 213/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 222/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLS 328


>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
 gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
          Length = 546

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 217/466 (46%), Gaps = 52/466 (11%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +SI  +P  +     LV+F    N+L  LP  +G  +NL     S N +TSLP+ 
Sbjct: 67  LDLSKSSITVLPSSVRELGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSLPDT 126

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA   ++  LD+  NKL                        N +PE +  L+ L  L L 
Sbjct: 127 LAHLRQLRVLDLRHNKL------------------------NEIPEVVYRLTSLTTLFLR 162

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ- 274
            NRI  +  +I+   +L    +  N +  LPA +GKL++L T D  +NQLK    E    
Sbjct: 163 FNRIREVGDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNC 222

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL--TGNPLRTLRSSL---VNGPTPALLKYL 329
           ++LS LD+ +N L  +P  IG +  L +L L    N L ++  SL   VN     +   L
Sbjct: 223 VQLSTLDVQHNELIDIPETIGNLKVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNL 282

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSK------------ELSLEGMNLSAIPSEIW 377
            S+LPE   S  S          +R + TS              +++E   ++ IP  I+
Sbjct: 283 VSQLPEGLLSSFSNLSS---LTLSRNNFTSYPVGGPSQFCSVYAINMEHNQINKIPFGIF 339

Query: 378 -EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
             A  +TKL++  N +  LP ++ +  ++  L L  N++   PD I   L SL  L L N
Sbjct: 340 SRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPDDI-QYLQSLEVLTLSN 398

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N LR++P      +  L++LDL  N + +LP       L  LQ+L  +  QL   P  I 
Sbjct: 399 NLLRRLPPT-IGSLAKLRVLDLEENRLDALPNE--IGMLRELQKLVAQSNQLSSLPRAIG 455

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            L  L  L + +N+L  IPE    L SL  L ++DN N+ +LP EL
Sbjct: 456 HLSNLTYLGVGENNLNFIPEEIGTLDSLESLYINDNPNLHSLPFEL 501



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 220/476 (46%), Gaps = 88/476 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ L L+ N++  L + L +L  L VL++ HNKL+E+P  +  L  L +L + FN I 
Sbjct: 108 VNLQTLALSENSLTSLPDTLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIR 167

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++ D I + T L       N+++ELP+ +G+   L  F ASNN +  LP ++ +C ++S 
Sbjct: 168 EVGDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLST 227

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ--NRILSI 222
           LDV+ N+L                          +PETIG+L  L RL L Q  N++ S+
Sbjct: 228 LDVQHNELI------------------------DIPETIGNLKVLTRLGLRQVYNQLTSV 263

Query: 223 PSSISGCCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGT 257
           P S+S C ++ +F + +N +S LP  L                          +   +  
Sbjct: 264 PKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYA 323

Query: 258 LDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +++  NQ+ +  + + +    L+ L++ +N L+ LP ++G  T + +L L  N L  +  
Sbjct: 324 INMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKV-- 381

Query: 316 SLVNGPTPALLKYLRS------------RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                  P  ++YL+S            RLP    S A     DL     RL     E+ 
Sbjct: 382 -------PDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDL--EENRLDALPNEIG 432

Query: 364 L---------EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN- 413
           +         +   LS++P  I     +T L +  N++  +P E+ +  SL++L ++ N 
Sbjct: 433 MLRELQKLVAQSNQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLDSLESLYINDNP 492

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
            +   P   L   S+L  + ++N PL Q+P +     P L ++ +S + +S P  P
Sbjct: 493 NLHSLPFE-LALCSNLQIMSIENCPLSQIPPEIVNGGPSL-VIQVSLSASSPPHFP 546



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 40/368 (10%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL ++ I  +PSS+     L EFY+  N L+ LP E+G L  L TL L  N L     
Sbjct: 66  RLDLSKSSITVLPSSVRELGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSLPD 125

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               LR L VLDL +N L+ +P  + ++T+L  L L  N +R +  ++ N     +L   
Sbjct: 126 TLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIREVGDNIANLTNLTMLSLR 185

Query: 330 RSRLPENEDSEASTTK--------EDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA 379
            +++ E        T+          L  + T +   V    L ++   L  IP  I   
Sbjct: 186 ENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETIGNL 245

Query: 380 GEITKLDLSR--NSIQELPPELSSCASLQTL------------------------ILSRN 413
             +T+L L +  N +  +P  LS+C ++                            LSRN
Sbjct: 246 KVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRN 305

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
               +P    +   S+  + +++N + ++P   F     L  L++  N + SLP +    
Sbjct: 306 NFTSYPVGGPSQFCSVYAINMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLD--MG 363

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +  ++ EL L   QL + P DI  LQ L +L LS N L+ +P    +L  L  LDL +N 
Sbjct: 364 TWTNMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENR 423

Query: 533 ISALPPEL 540
           + ALP E+
Sbjct: 424 LDALPNEI 431


>gi|167379285|ref|XP_001735078.1| oligodendrocyte-myelin glycoprotein precursor [Entamoeba dispar
           SAW760]
 gi|165903118|gb|EDR28771.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           dispar SAW760]
          Length = 508

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 212/444 (47%), Gaps = 34/444 (7%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S   L E P  + +C+  ++F AS N  TS+PED+     +  L +  N++T + ++
Sbjct: 21  IEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCIMPNLEVLTLSNNRITSIPDS 79

Query: 179 LIASWTMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            I   + L EL   +N    +G+   I   S L RLD+  N++ SIP  I    SL    
Sbjct: 80  -IQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLN 138

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +  N L +LP E+G L KL TL ++ N +++   E   LR L  LDLSNN +  LP E+ 
Sbjct: 139 ISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELS 198

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            M  L+ L +  N L      L N       K+L     +N          D +   TRL
Sbjct: 199 NMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQNNQGILELPPLDSLQNLTRL 252

Query: 356 SVTS---------------KELSL-EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            V +                EL++ + + +  +P EI+    + +LD    +I  LPP +
Sbjct: 253 VVKNLPITSIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNITVLPPNI 312

Query: 400 SSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           +S  +L  L L+ N + +  +P+ I ++L++++ L + NN +   P     D+  +  LD
Sbjct: 313 TSLTNLNILELAHNSLNESSFPEGI-STLTNITKLSISNNQIHSYPQ-CLCDLTSIVDLD 370

Query: 458 LSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           +S N+   LPE   FS+L ++Q L +   +L   P  + RL  +  LD   N L+S+P  
Sbjct: 371 VSNNLMVELPET--FSNLTNVQNLTIAGNRLNRLPESLGRLISVTYLDARNNQLKSLPPS 428

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             +L  L  L+L+ N I  LP E+
Sbjct: 429 IGDLRQLNRLELTQNMIPVLPVEM 452



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 202/438 (46%), Gaps = 74/438 (16%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEA--GEGDKWWEAV--------DLQKLILAHNNIEKLK 61
           L LSN  +  +P+ + K  N  E   G+ + +++ +        +LQ+L ++ N +E + 
Sbjct: 66  LTLSNNRITSIPDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIP 125

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ +L  L  LN+S N L  LP  IG L  L++L V+ NSI K+P EIG+  +L + D 
Sbjct: 126 PEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDL 185

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK---------- 171
           S+NQ+  LP  L   + L   +   N ++   + L +   + +LD + N+          
Sbjct: 186 SNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPPLDS 245

Query: 172 -----------LTVLSNNLIASWTMLTELIASKNL-LNGMPETIGSLSRLIRLDLHQNRI 219
                      L + S   ++S  ML EL    N+ + GMPE I +++ L RLD     I
Sbjct: 246 LQNLTRLVVKNLPITSIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNI 305

Query: 220 LSIPSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
             +P +I+   +L    + +N+L  S+ P  +  L+ +  L + +NQ+  Y    C L  
Sbjct: 306 TVLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNITKLSISNNQIHSYPQCLCDLTS 365

Query: 278 SV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            V LD+SNN +  LP     +T ++ L + GN L                    +RLPE 
Sbjct: 366 IVDLDVSNNLMVELPETFSNLTNVQNLTIAGNRL--------------------NRLPE- 404

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                        ++   +SVT   L      L ++P  I +  ++ +L+L++N I  LP
Sbjct: 405 -------------SLGRLISVTY--LDARNNQLKSLPPSIGDLRQLNRLELTQNMIPVLP 449

Query: 397 PELSSC-ASLQTLILSRN 413
            E+      LQT+ L+ N
Sbjct: 450 VEMGQLDGILQTIELTNN 467



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 64/367 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S  +L+ +P E+       G  DK      LQ L++  N+I KL  ++ NL  L  L
Sbjct: 137 LNISENNLKSLPPEI-------GMLDK------LQTLLVNKNSIRKLPTEIGNLRSLYEL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ-LKELPSS 132
           ++S+N++  LP  +  +  LK L + FN +    D + +   LV+ DC +NQ + ELP  
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 133 LGRCLNLSDFKASNNCITS-----------------------LPEDLADCSKMSKLDVEG 169
           L    NL+     N  ITS                       +PE++ + + + +LD  G
Sbjct: 243 LDSLQNLTRLVVKNLPITSIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVG 302

Query: 170 NKLTVLSNNL------------------------IASWTMLTELIASKNLLNGMPETIGS 205
             +TVL  N+                        I++ T +T+L  S N ++  P+ +  
Sbjct: 303 CNITVLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNITKLSISNNQIHSYPQCLCD 362

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L+ ++ LD+  N ++ +P + S   ++    +  N L+ LP  LG+L  +  LD  +NQL
Sbjct: 363 LTSIVDLDVSNNLMVELPETFSNLTNVQNLTIAGNRLNRLPESLGRLISVTYLDARNNQL 422

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K        LR L+ L+L+ N +  LP E+G++   L+ + LT NPL      +V     
Sbjct: 423 KSLPPSIGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEVVVKGAH 482

Query: 324 ALLKYLR 330
            + +YL+
Sbjct: 483 EICQYLK 489



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 60/290 (20%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL LSNN ++ +P  I K + LR+L L  N L                          
Sbjct: 63  LEVLTLSNNRITSIPDSIQKASNLRELYLGQNNLFY------------------------ 98

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                     D I+   ++    + L +    L +IP EI     +  L++S N+++ LP
Sbjct: 99  ----------DGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLP 148

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
           PE+     LQTL++++N I+  P  I  +L SL  L L NN +  +P +   ++  L+IL
Sbjct: 149 PEIGMLDKLQTLLVNKNSIRKLPTEI-GNLRSLYELDLSNNQMDLLPEE-LSNMIALKIL 206

Query: 457 DLSYNIAS----------------------LPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            + +N  S                      + E PP  SL +L  L ++ + +   P  +
Sbjct: 207 RIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPPLDSLQNLTRLVVKNLPITSIP-GL 265

Query: 495 LRLQQLRILDLSQN-SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L+ L  L++  N  ++ +PE   N+ SL  LD    NI+ LPP + S+
Sbjct: 266 SSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNITVLPPNITSL 315


>gi|302792869|ref|XP_002978200.1| hypothetical protein SELMODRAFT_50240 [Selaginella moellendorffii]
 gi|300154221|gb|EFJ20857.1| hypothetical protein SELMODRAFT_50240 [Selaginella moellendorffii]
          Length = 1254

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 254/541 (46%), Gaps = 62/541 (11%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           LQ L + +N++   + E++     L  LN+  N L+ +LP ++ +L  L++LD+S NSI 
Sbjct: 260 LQTLSIFNNSLSGSVPEEVGQCRQLVYLNLQGNDLTGQLPDSLAKLAALETLDLSENSIS 319

Query: 105 K-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSK 161
             IPD IGS  +L     S NQL  E+PSS+G    L   F  SN     +P ++ +C  
Sbjct: 320 GPIPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLEQLFLGSNRLSGEIPGEIGECRS 379

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI- 219
           + +LD+  N+LT      I   +MLT+L+   N L G +PE IGS   L  L L++N++ 
Sbjct: 380 LQRLDLSSNRLTGTIPASIGRLSMLTDLVLQSNSLTGSIPEEIGSCKNLAVLALYENQLN 439

Query: 220 LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
            SIP+SI     L E Y+  N LS  +PA +G  SKL  LDL  N L      +      
Sbjct: 440 GSIPASIGSLEQLDELYLYRNKLSGNIPASIGSCSKLTLLDLSENLLDGAIPSSIGGLGA 499

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+ L L  N LSG +P  + +   +RKL L  N L           + A+ + L S +  
Sbjct: 500 LTFLHLRRNRLSGSIPAPMARCAKMRKLDLAENSL-----------SGAIPQDLTSAM-- 546

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS------AIPSEIWEAGEITKLDLSR 389
             D E     ++ +T A   S+ S   +L  +NLS       IP  +  +G +  LDL+ 
Sbjct: 547 -ADLEMLLLYQNNLTGAVPESIASCCHNLTTINLSDNLLGGKIPPLLGSSGALQVLDLTD 605

Query: 390 NSI-QELPPELSSCASLQTLILSRNKIKDWPDA------------------------ILT 424
           N I   +PP L   ++L  L L  NKI+    A                        IL 
Sbjct: 606 NGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNITALSFVDLSFNRLAGAIPSILA 665

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYL 482
           S  +L+ +KL+ N L+    +    +  L  LDLS N  I  +P +   S  P +  L L
Sbjct: 666 SCKNLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQNELIGEIPGS-IISGCPKISTLKL 724

Query: 483 RRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNI-SALPPE 539
              +L    P  +  LQ L+ L+L  N L+  IP    N   L E++LS N++   +P E
Sbjct: 725 AENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIGNCGLLLEVNLSRNSLQGGIPRE 784

Query: 540 L 540
           L
Sbjct: 785 L 785



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 243/509 (47%), Gaps = 47/509 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALV 117
           + + +  L  L +L +++ +LS  +P  IG+L  L+SL + +N++   IP E+     L 
Sbjct: 178 IPDSIAGLHSLQILGLANCELSGGIPRGIGQLVALESLMLHYNNLSGGIPPEVTQCRQLT 237

Query: 118 KFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVL 175
               S N+L   +P  +     L      NN ++ S+PE++  C ++  L+++GN LT  
Sbjct: 238 VLGLSENRLTGPIPRGISDLAALQTLSIFNNSLSGSVPEEVGQCRQLVYLNLQGNDLTGQ 297

Query: 176 SNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLA 233
             + +A    L  L  S+N ++G +P+ IGSL+ L  L L  N++   IPSSI G   L 
Sbjct: 298 LPDSLAKLAALETLDLSENSISGPIPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLE 357

Query: 234 EFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD---LSNNSLSG 289
           + ++G+N LS  +P E+G+   L  LDL SN+L    + A   RLS+L    L +NSL+G
Sbjct: 358 QLFLGSNRLSGEIPGEIGECRSLQRLDLSSNRLTG-TIPASIGRLSMLTDLVLQSNSLTG 416

Query: 290 -LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL---------RSRLPEN-ED 338
            +P EIG    L  L L  N L        NG  PA +  L         R++L  N   
Sbjct: 417 SIPEEIGSCKNLAVLALYENQL--------NGSIPASIGSLEQLDELYLYRNKLSGNIPA 468

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPP 397
           S  S +K  L+ ++  L        L+G    AIPS I   G +T L L RN +   +P 
Sbjct: 469 SIGSCSKLTLLDLSENL--------LDG----AIPSSIGGLGALTFLHLRRNRLSGSIPA 516

Query: 398 ELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQI 455
            ++ CA ++ L L+ N +    P  + ++++ L  L L  NN    VP         L  
Sbjct: 517 PMARCAKMRKLDLAENSLSGAIPQDLTSAMADLEMLLLYQNNLTGAVPESIASCCHNLTT 576

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-I 513
           ++LS N+      P   S   LQ L L    +    P  +     L  L L  N ++  I
Sbjct: 577 INLSDNLLGGKIPPLLGSSGALQVLDLTDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLI 636

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVS 542
           P    N+T+L+ +DLS N ++   P +++
Sbjct: 637 PAELGNITALSFVDLSFNRLAGAIPSILA 665



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 188/400 (47%), Gaps = 59/400 (14%)

Query: 180 IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYM 237
           IA+ T+LTEL+   NLL+G +P  IG LS L  L    N     IP SI+G  SL    +
Sbjct: 134 IANATLLTELLVYSNLLSGSIPSEIGRLSTLQVLRAGDNLFSGPIPDSIAGLHSLQILGL 193

Query: 238 GNNALS-ALPAELGKLSKLGTLDLHSNQLKEYC---VEACQLRLSVLDLS---------- 283
            N  LS  +P  +G+L  L +L LH N L       V  C+ +L+VL LS          
Sbjct: 194 ANCELSGGIPRGIGQLVALESLMLHYNNLSGGIPPEVTQCR-QLTVLGLSENRLTGPIPR 252

Query: 284 --------------NNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                         NNSLSG +P E+G+   L  L L GN L         G  P  L  
Sbjct: 253 GISDLAALQTLSIFNNSLSGSVPEEVGQCRQLVYLNLQGNDL--------TGQLPDSLAK 304

Query: 329 LRS--RLPENEDSEASTTKEDLITMAT--RLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L +   L  +E+S +    + + ++A+   L+++  +LS E      IPS I     + +
Sbjct: 305 LAALETLDLSENSISGPIPDWIGSLASLENLALSMNQLSGE------IPSSIGGLARLEQ 358

Query: 385 LDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QV 442
           L L  N +  E+P E+  C SLQ L LS N++     A +  LS L+ L L +N L   +
Sbjct: 359 LFLGSNRLSGEIPGEIGECRSLQRLDLSSNRLTGTIPASIGRLSMLTDLVLQSNSLTGSI 418

Query: 443 PSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQ 499
           P +    K++ +L + +   N  S+P +    SL  L ELYL R +L    P  I    +
Sbjct: 419 PEEIGSCKNLAVLALYENQLN-GSIPAS--IGSLEQLDELYLYRNKLSGNIPASIGSCSK 475

Query: 500 LRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPP 538
           L +LDLS+N L  +IP     L +LT L L  N +S   P
Sbjct: 476 LTLLDLSENLLDGAIPSSIGGLGALTFLHLRRNRLSGSIP 515



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 141/289 (48%), Gaps = 43/289 (14%)

Query: 45  VDLQKLILAHNNI-----EKLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDV 98
            DL+ L+L  NN+     E +     NL   T +N+S N L  ++P  +G    L+ LD+
Sbjct: 547 ADLEMLLLYQNNLTGAVPESIASCCHNL---TTINLSDNLLGGKIPPLLGSSGALQVLDL 603

Query: 99  SFNSIMK-------------------------IPDEIGSATALVKFDCSSNQLK-ELPSS 132
           + N I                           IP E+G+ TAL   D S N+L   +PS 
Sbjct: 604 TDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNITALSFVDLSFNRLAGAIPSI 663

Query: 133 LGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTV-LSNNLIASWTMLTELI 190
           L  C NL+  K + N +   +PE++    ++ +LD+  N+L   +  ++I+    ++ L 
Sbjct: 664 LASCKNLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQNELIGEIPGSIISGCPKISTLK 723

Query: 191 ASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNAL-SALPA 247
            ++N L+G +P  +G L  L  L+L  N +   IP+SI  C  L E  +  N+L   +P 
Sbjct: 724 LAENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIGNCGLLLEVNLSRNSLQGGIPR 783

Query: 248 ELGKLSKLGT-LDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           ELGKL  L T LDL  N+L         +  +L VL+LS+N++SG  PE
Sbjct: 784 ELGKLQNLQTSLDLSFNRLNGSIPPELGMLSKLEVLNLSSNAISGTIPE 832



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 191/431 (44%), Gaps = 81/431 (18%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI- 103
           L  L+L  N++   + E++ +   L VL +  N+L   +PA+IG L  L  L +  N + 
Sbjct: 404 LTDLVLQSNSLTGSIPEEIGSCKNLAVLALYENQLNGSIPASIGSLEQLDELYLYRNKLS 463

Query: 104 MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSK 161
             IP  IGS + L   D S N L   +PSS+G    L+      N ++ S+P  +A C+K
Sbjct: 464 GNIPASIGSCSKLTLLDLSENLLDGAIPSSIGGLGALTFLHLRRNRLSGSIPAPMARCAK 523

Query: 162 MSKLDVEGNKLT------------------VLSNNL-------IASWTM-LTELIASKNL 195
           M KLD+  N L+                  +  NNL       IAS    LT +  S NL
Sbjct: 524 MRKLDLAENSLSGAIPQDLTSAMADLEMLLLYQNNLTGAVPESIASCCHNLTTINLSDNL 583

Query: 196 LNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSAL-PAELGKL 252
           L G +P  +GS   L  LDL  N I   IP S+    +L    +G N +  L PAELG +
Sbjct: 584 LGGKIPPLLGSSGALQVLDLTDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNI 643

Query: 253 SKLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGN 308
           + L  +DL  N+L       + +C+  L+ + L+ N L G +P EIG +  L +L L+ N
Sbjct: 644 TALSFVDLSFNRLAGAIPSILASCK-NLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQN 702

Query: 309 PL-RTLRSSLVNG-PTPALLKY----LRSRLP--------------ENEDSEA---STTK 345
            L   +  S+++G P  + LK     L  R+P              +  D E    ++  
Sbjct: 703 ELIGEIPGSIISGCPKISTLKLAENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIG 762

Query: 346 EDLITMATRLS------------------VTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              + +   LS                   TS +LS   +N  +IP E+    ++  L+L
Sbjct: 763 NCGLLLEVNLSRNSLQGGIPRELGKLQNLQTSLDLSFNRLN-GSIPPELGMLSKLEVLNL 821

Query: 388 SRNSIQELPPE 398
           S N+I    PE
Sbjct: 822 SSNAISGTIPE 832



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 129/314 (41%), Gaps = 26/314 (8%)

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLL 305
           + +  L KL  LDL +N             L  L L+ NSL+G LP  I   T L +LL+
Sbjct: 86  SAIAHLDKLELLDLSNNSFSGPMPSQLPASLRSLRLNENSLTGPLPASIANATLLTELLV 145

Query: 306 TGN--------------PLRTLRSS--LVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
             N               L+ LR+   L +GP P  +  L S ++    + E S      
Sbjct: 146 YSNLLSGSIPSEIGRLSTLQVLRAGDNLFSGPIPDSIAGLHSLQILGLANCELSGG---- 201

Query: 349 ITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQ 406
           I       V  + L L   NLS  IP E+ +  ++T L LS N +   +P  +S  A+LQ
Sbjct: 202 IPRGIGQLVALESLMLHYNNLSGGIPPEVTQCRQLTVLGLSENRLTGPIPRGISDLAALQ 261

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           TL +  N +       +     L  L L  N L     D    +  L+ LDLS N  S P
Sbjct: 262 TLSIFNNSLSGSVPEEVGQCRQLVYLNLQGNDLTGQLPDSLAKLAALETLDLSENSISGP 321

Query: 467 ENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLT 524
                 SL  L+ L L   QL  E P+ I  L +L  L L  N L   IP       SL 
Sbjct: 322 IPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLEQLFLGSNRLSGEIPGEIGECRSLQ 381

Query: 525 ELDLSDNNISALPP 538
            LDLS N ++   P
Sbjct: 382 RLDLSSNRLTGTIP 395



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 110/271 (40%), Gaps = 40/271 (14%)

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +L +LDLSNNS SG +P ++    +LR L L  N L         GP PA +        
Sbjct: 93  KLELLDLSNNSFSGPMPSQL--PASLRSLRLNENSL--------TGPLPASIAN------ 136

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                          T+ T L V S  LS       +IPSEI     +  L    N    
Sbjct: 137 --------------ATLLTELLVYSNLLS------GSIPSEIGRLSTLQVLRAGDNLFSG 176

Query: 395 -LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            +P  ++   SLQ L L+  ++       +  L +L  L L  N L             L
Sbjct: 177 PIPDSIAGLHSLQILGLANCELSGGIPRGIGQLVALESLMLHYNNLSGGIPPEVTQCRQL 236

Query: 454 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS 512
            +L LS N  + P     S L  LQ L +    L    P ++ + +QL  L+L  N L  
Sbjct: 237 TVLGLSENRLTGPIPRGISDLAALQTLSIFNNSLSGSVPEEVGQCRQLVYLNLQGNDLTG 296

Query: 513 -IPEGFKNLTSLTELDLSDNNISALPPELVS 542
            +P+    L +L  LDLS+N+IS   P+ + 
Sbjct: 297 QLPDSLAKLAALETLDLSENSISGPIPDWIG 327


>gi|198451591|ref|XP_001358430.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
 gi|198131558|gb|EAL27569.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
          Length = 1889

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LT+L
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFTQLKNLTIL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 174/373 (46%), Gaps = 44/373 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPPEL +C
Sbjct: 309 ------IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNC 358

Query: 403 ASLQTLILSRNKI 415
             L  L +S N++
Sbjct: 359 TVLHVLDVSGNQL 371



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 164/356 (46%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L++L L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCDNMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I R+ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPEL 355



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L IL L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFTQLKNLTILGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LNRLRKLGLSDNEIGRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP++                        I     L EL  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKE------------------------IGQLKNLRELYL 145

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG L  L +L+L+ N++ ++P  I    +L E ++  N L  L AE+G+
Sbjct: 146 NTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P+EI +   + +L LS N ++ L  E+    +L+ L L  N++   P  I
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 146/301 (48%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+              +  +LQ+L L+ N +    +++  L  L  L
Sbjct: 74  LELNNNQLATLPKEI-------------GQLQNLQELHLSGNQLTTFPKEIGQLKNLQTL 120

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+ LP  IG+L  L+ L ++ N +  +P EIG    L + +  +NQLK LP  +
Sbjct: 121 VLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEI 180

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S N + +L  ++     +  LD+  N+L  L    I     L  L  + 
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKE-IGQLKNLQMLDLNN 239

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE IG L  L  LDL  N+  ++P  I    +L   ++ NN    +P E G+L 
Sbjct: 240 NQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L++NQL     E  QL+ L  L LS N L  L  EIG++  L+KL L  N L T
Sbjct: 300 NLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTT 359

Query: 313 L 313
           L
Sbjct: 360 L 360



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 163/335 (48%), Gaps = 19/335 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N + +LP+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L    I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPKE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR         E   
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR---------ELHL 329

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEI 376
           +   L T++  +      K+LSL    L+ +P EI
Sbjct: 330 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 61/352 (17%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL + ++ ++P  I    +L    + NN L+ LP E+G+L  L  L L  NQL  +  E
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+ LP EIG++  LR+L L  N L+TL   +        LK L+
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEI------GQLKNLQ 164

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                         +L+L    L  +P EI +   + +L LS N
Sbjct: 165 ------------------------------QLNLYANQLKTLPKEIGQLQNLRELHLSYN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            ++ L  E+    +LQ L L+ N++K  P  I   L +L  L L+NN  + VP +    +
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQMLDLNNNQFKTVPEE-IGQL 252

Query: 451 PMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRMQLR 488
             LQ+LDL YN   ++PE              N  F ++P       +LQ L L   QL 
Sbjct: 253 KNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLT 312

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +L+ LR L LS N L+++      L +L +L L DN ++ LP E+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 165/362 (45%), Gaps = 48/362 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+++     +  L++  N+L  L    I     L EL  S N
Sbjct: 49  RVLDLSEQK-----LKTLPKEIGQLQNLQVLELNNNQLATLPKE-IGQLQNLQELHLSGN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG L  L  L L +NR+ ++P  I    +L E Y+  N L  LP E+G+L  
Sbjct: 103 QLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++  L+ L L  N L+TL
Sbjct: 163 LQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +        LK L+                               L L       +P
Sbjct: 223 PKEI------GQLKNLQM------------------------------LDLNNNQFKTVP 246

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  LDL  N  + +P E+    +LQ L L+ N+ K  P+     L +L  L 
Sbjct: 247 EEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET-GQLKNLQMLS 305

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L+ N L  +P++  + +  L+ L LSYN + +L  +     L +L++L LR  QL   P 
Sbjct: 306 LNANQLTTLPNE-IRQLKNLRELHLSYNQLKTL--SAEIGQLKNLKKLSLRDNQLTTLPK 362

Query: 493 DI 494
           +I
Sbjct: 363 EI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +P E+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPKEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            N L  +   IG L  L +L L  N++ ++P  I
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|268551887|ref|XP_002633925.1| C. briggsae CBR-SOC-2 protein [Caenorhabditis briggsae]
 gi|261277879|sp|A8XWW4.1|SHOC2_CAEBR RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
          Length = 559

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 208/441 (47%), Gaps = 39/441 (8%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           +L +  L +VP  +YK                L+ L L +N I  + E + NL  L +L+
Sbjct: 148 DLRHNKLTEVPAVIYK-------------ITSLETLWLRYNRIVAVDEQIGNLQKLKMLD 194

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   AL + D   N L ELP S+G
Sbjct: 195 VRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLDLQHNDLSELPYSIG 254

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S+N
Sbjct: 255 KLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRN 314

Query: 195 LLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
            L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP ++G
Sbjct: 315 ELTAFPA--GGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMG 372

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  N 
Sbjct: 373 SWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENE 432

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGM 367
           L T+ + +        L++L         ++       ++T+   +    + ++L L   
Sbjct: 433 LETVPTEI------GFLQHL---------TKLWVQSNKIVTLPRSIGNLCSLQDLRLGEN 477

Query: 368 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           NL+AIP EI     +  L L+ NS +  LP EL+ C SL+ + +  + +   P  I    
Sbjct: 478 NLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGG 537

Query: 427 SSLSCLKLD-NNPLRQVPSDG 446
            SL    L    P R V   G
Sbjct: 538 PSLVIQYLKMQGPYRGVVMTG 558



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 211/460 (45%), Gaps = 73/460 (15%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+PA I ++  L++L + +N 
Sbjct: 117 QLVNLKKLGLSENALSSLPDSLSSLESLETLDLRHNKLTEVPAVIYKITSLETLWLRYNR 176

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I+ + ++IG+   L   D   N+++ELPS++G+  +L     S N +T +PE++ +C  +
Sbjct: 177 IVAVDEQIGNLQKLKMLDVRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHAL 236

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD++ N L+ L                        P +IG L+ L+R+ +  N+I  I
Sbjct: 237 TQLDLQHNDLSEL------------------------PYSIGKLTNLVRIGIRYNKIRCI 272

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ------- 274
           PS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q       
Sbjct: 273 PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVPTVT 332

Query: 275 -------------------LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                               RL+ L+L  N L  LP ++G  T++ +L L+ N L+ L  
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +       +L    ++L +  +   +  K   + +      T             +P+E
Sbjct: 393 DIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELET-------------VPTE 439

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I     +TKL +  N I  LP  + +  SLQ L L  N +   P+ I   L SL  L L+
Sbjct: 440 IGFLQHLTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLTAIPEEI-GHLDSLKSLYLN 498

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           +N           ++P    L  S  I S+ EN P S +P
Sbjct: 499 DN-------SSLHNLPFELALCQSLEIMSI-ENSPLSQIP 530



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 256/551 (46%), Gaps = 76/551 (13%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEA-----GEGDKWWEAVDLQKLILAHN 55
           + R+   AR     +LS +    V       FD+       E  K  EA D Q+L L+  
Sbjct: 25  VGRLSNFARNKARHSLSEKGSNSVGGSGGSGFDKPRKDLLKEFHKCKEAQD-QRLDLSSI 83

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            I  +   ++ L  LT L +  NKL+ LP  IG+L  LK L +S N++  +PD + S  +
Sbjct: 84  EITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLPDSLSSLES 143

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   D   N+L E+P+ + +  +L       N I ++ E + +  K+  LDV  NK+  L
Sbjct: 144 LETLDLRHNKLTEVPAVIYKITSLETLWLRYNRIVAVDEQIGNLQKLKMLDVRENKIREL 203

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
                                   P  IG LS L+   +  N +  +P  I  C +L + 
Sbjct: 204 ------------------------PSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQL 239

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV----EACQLRLSVLDLSNNSLSGLP 291
            + +N LS LP  +GKL+ L  + +  N+++  C+    E+CQ +L    + +N L  LP
Sbjct: 240 DLQHNDLSELPYSIGKLTNLVRIGIRYNKIR--CIPSELESCQ-QLEEFIVESNHLQLLP 296

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
           P +  +T L K+    + +   R+ L   P     +++ +     E ++ S     + + 
Sbjct: 297 PNL--LTMLPKI----HTVNLSRNELTAFPAGGPQQFVPTVTINMEHNQISKIPIGIFSK 350

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
           ATRL+    +L+L+   L ++P ++     IT+L+LS N ++ LP ++    +L+ L+LS
Sbjct: 351 ATRLT----KLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLS 406

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPP 470
            N++K  P+ I  +L  L  L L+ N L  VP++ GF                       
Sbjct: 407 NNQLKKLPNQI-GNLKKLRELDLEENELETVPTEIGF----------------------- 442

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
              L HL +L+++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+D
Sbjct: 443 ---LQHLTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLND 499

Query: 531 N-NISALPPEL 540
           N ++  LP EL
Sbjct: 500 NSSLHNLPFEL 510



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 5/159 (3%)

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           DL  N + E+P  +    SL+TL L  N+I    D  + +L  L  L +  N +R++PS 
Sbjct: 148 DLRHNKLTEVPAVIYKITSLETLWLRYNRIVAV-DEQIGNLQKLKMLDVRENKIRELPS- 205

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
               +  L +  +SYN +  +PE         L +L L+   L E P  I +L  L  + 
Sbjct: 206 AIGKLSSLVVCLVSYNHLTRVPEE--IGECHALTQLDLQHNDLSELPYSIGKLTNLVRIG 263

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +  N ++ IP   ++   L E  +  N++  LPP L+++
Sbjct: 264 IRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 302


>gi|302765879|ref|XP_002966360.1| hypothetical protein SELMODRAFT_60230 [Selaginella moellendorffii]
 gi|300165780|gb|EFJ32387.1| hypothetical protein SELMODRAFT_60230 [Selaginella moellendorffii]
          Length = 1238

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 254/541 (46%), Gaps = 62/541 (11%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           LQ L + +N++   + E++     L  LN+  N L+ +LP ++ +L  L++LD+S NSI 
Sbjct: 244 LQTLSIFNNSLSGSVPEEVGQCRQLLYLNLQGNDLTGQLPDSLAKLAALETLDLSENSIS 303

Query: 105 K-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSK 161
             IPD IGS  +L     S NQL  E+PSS+G    L   F  SN     +P ++ +C  
Sbjct: 304 GPIPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLEQLFLGSNRLSGEIPGEIGECRS 363

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI- 219
           + +LD+  N+LT      I   +MLT+L+   N L G +PE IGS   L  L L++N++ 
Sbjct: 364 LQRLDLSSNRLTGTIPASIGRLSMLTDLVLQSNSLTGSIPEEIGSCKNLAVLALYENQLN 423

Query: 220 LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
            SIP+SI     L E Y+  N LS  +PA +G  SKL  LDL  N L      +      
Sbjct: 424 GSIPASIGSLEQLDELYLYRNKLSGNIPASIGSCSKLTLLDLSENLLDGAIPSSIGGLGA 483

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+ L L  N LSG +P  + +   +RKL L  N L           + A+ + L S +  
Sbjct: 484 LTFLHLRRNRLSGSIPAPMARCAKMRKLDLAENSL-----------SGAIPQDLTSAM-- 530

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS------AIPSEIWEAGEITKLDLSR 389
             D E     ++ +T A   S+ S   +L  +NLS       IP  +  +G +  LDL+ 
Sbjct: 531 -ADLEMLLLYQNNLTGAVPESIASCCHNLTTINLSDNLLGGKIPPLLGSSGALQVLDLTD 589

Query: 390 NSI-QELPPELSSCASLQTLILSRNKIKDWPDA------------------------ILT 424
           N I   +PP L   ++L  L L  NKI+    A                        IL 
Sbjct: 590 NGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNITALSFVDLSFNRLAGAIPSILA 649

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYL 482
           S  +L+ +KL+ N L+    +    +  L  LDLS N  I  +P +   S  P +  L L
Sbjct: 650 SCKNLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQNELIGEIPGS-IISGCPKISTLKL 708

Query: 483 RRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNI-SALPPE 539
              +L    P  +  LQ L+ L+L  N L+  IP    N   L E++LS N++   +P E
Sbjct: 709 AENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIGNCGLLLEVNLSHNSLQGGIPRE 768

Query: 540 L 540
           L
Sbjct: 769 L 769



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 243/509 (47%), Gaps = 47/509 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALV 117
           + + +  L  L +L +++ +LS  +P  IG+L  L+SL + +N++   IP E+     L 
Sbjct: 162 IPDSIAGLHSLQILGLANCELSGGIPRGIGQLAALESLMLHYNNLSGGIPPEVTQCRQLT 221

Query: 118 KFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVL 175
               S N+L   +P  +     L      NN ++ S+PE++  C ++  L+++GN LT  
Sbjct: 222 VLGLSENRLTGPIPRGISDLAALQTLSIFNNSLSGSVPEEVGQCRQLLYLNLQGNDLTGQ 281

Query: 176 SNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLA 233
             + +A    L  L  S+N ++G +P+ IGSL+ L  L L  N++   IPSSI G   L 
Sbjct: 282 LPDSLAKLAALETLDLSENSISGPIPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLE 341

Query: 234 EFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD---LSNNSLSG 289
           + ++G+N LS  +P E+G+   L  LDL SN+L    + A   RLS+L    L +NSL+G
Sbjct: 342 QLFLGSNRLSGEIPGEIGECRSLQRLDLSSNRLTG-TIPASIGRLSMLTDLVLQSNSLTG 400

Query: 290 -LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL---------RSRLPEN-ED 338
            +P EIG    L  L L  N L        NG  PA +  L         R++L  N   
Sbjct: 401 SIPEEIGSCKNLAVLALYENQL--------NGSIPASIGSLEQLDELYLYRNKLSGNIPA 452

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPP 397
           S  S +K  L+ ++  L        L+G    AIPS I   G +T L L RN +   +P 
Sbjct: 453 SIGSCSKLTLLDLSENL--------LDG----AIPSSIGGLGALTFLHLRRNRLSGSIPA 500

Query: 398 ELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQI 455
            ++ CA ++ L L+ N +    P  + ++++ L  L L  NN    VP         L  
Sbjct: 501 PMARCAKMRKLDLAENSLSGAIPQDLTSAMADLEMLLLYQNNLTGAVPESIASCCHNLTT 560

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-I 513
           ++LS N+      P   S   LQ L L    +    P  +     L  L L  N ++  I
Sbjct: 561 INLSDNLLGGKIPPLLGSSGALQVLDLTDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLI 620

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVS 542
           P    N+T+L+ +DLS N ++   P +++
Sbjct: 621 PAELGNITALSFVDLSFNRLAGAIPSILA 649



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 190/400 (47%), Gaps = 59/400 (14%)

Query: 180 IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYM 237
           IA+ T+LTEL+   NLL+G +P  IG LS+L  L    N     IP SI+G  SL    +
Sbjct: 118 IANATLLTELLVYSNLLSGSIPSEIGRLSKLRVLRAGDNLFSGPIPDSIAGLHSLQILGL 177

Query: 238 GNNALS-ALPAELGKLSKLGTLDLHSNQLKEYC---VEACQLRLSVLDLS---------- 283
            N  LS  +P  +G+L+ L +L LH N L       V  C+ +L+VL LS          
Sbjct: 178 ANCELSGGIPRGIGQLAALESLMLHYNNLSGGIPPEVTQCR-QLTVLGLSENRLTGPIPR 236

Query: 284 --------------NNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                         NNSLSG +P E+G+   L  L L GN L         G  P  L  
Sbjct: 237 GISDLAALQTLSIFNNSLSGSVPEEVGQCRQLLYLNLQGNDL--------TGQLPDSLAK 288

Query: 329 LRS--RLPENEDSEASTTKEDLITMAT--RLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L +   L  +E+S +    + + ++A+   L+++  +LS E      IPS I     + +
Sbjct: 289 LAALETLDLSENSISGPIPDWIGSLASLENLALSMNQLSGE------IPSSIGGLARLEQ 342

Query: 385 LDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QV 442
           L L  N +  E+P E+  C SLQ L LS N++     A +  LS L+ L L +N L   +
Sbjct: 343 LFLGSNRLSGEIPGEIGECRSLQRLDLSSNRLTGTIPASIGRLSMLTDLVLQSNSLTGSI 402

Query: 443 PSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQ 499
           P +    K++ +L + +   N  S+P +    SL  L ELYL R +L    P  I    +
Sbjct: 403 PEEIGSCKNLAVLALYENQLN-GSIPAS--IGSLEQLDELYLYRNKLSGNIPASIGSCSK 459

Query: 500 LRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPP 538
           L +LDLS+N L  +IP     L +LT L L  N +S   P
Sbjct: 460 LTLLDLSENLLDGAIPSSIGGLGALTFLHLRRNRLSGSIP 499



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 43/289 (14%)

Query: 45  VDLQKLILAHNNI-----EKLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDV 98
            DL+ L+L  NN+     E +     NL   T +N+S N L  ++P  +G    L+ LD+
Sbjct: 531 ADLEMLLLYQNNLTGAVPESIASCCHNL---TTINLSDNLLGGKIPPLLGSSGALQVLDL 587

Query: 99  SFNSIMK-------------------------IPDEIGSATALVKFDCSSNQLK-ELPSS 132
           + N I                           IP E+G+ TAL   D S N+L   +PS 
Sbjct: 588 TDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNITALSFVDLSFNRLAGAIPSI 647

Query: 133 LGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTV-LSNNLIASWTMLTELI 190
           L  C NL+  K + N +   +PE++    ++ +LD+  N+L   +  ++I+    ++ L 
Sbjct: 648 LASCKNLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQNELIGEIPGSIISGCPKISTLK 707

Query: 191 ASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNAL-SALPA 247
            ++N L+G +P  +G L  L  L+L  N +   IP+SI  C  L E  + +N+L   +P 
Sbjct: 708 LAENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIGNCGLLLEVNLSHNSLQGGIPR 767

Query: 248 ELGKLSKLGT-LDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           ELGKL  L T LDL  N+L         +  +L VL+LS+N++SG+ PE
Sbjct: 768 ELGKLQNLQTSLDLSFNRLNGSIPPELGMLSKLEVLNLSSNAISGMIPE 816



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 191/431 (44%), Gaps = 81/431 (18%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI- 103
           L  L+L  N++   + E++ +   L VL +  N+L   +PA+IG L  L  L +  N + 
Sbjct: 388 LTDLVLQSNSLTGSIPEEIGSCKNLAVLALYENQLNGSIPASIGSLEQLDELYLYRNKLS 447

Query: 104 MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSK 161
             IP  IGS + L   D S N L   +PSS+G    L+      N ++ S+P  +A C+K
Sbjct: 448 GNIPASIGSCSKLTLLDLSENLLDGAIPSSIGGLGALTFLHLRRNRLSGSIPAPMARCAK 507

Query: 162 MSKLDVEGNK------------------LTVLSNNL-------IASWTM-LTELIASKNL 195
           M KLD+  N                   L +  NNL       IAS    LT +  S NL
Sbjct: 508 MRKLDLAENSLSGAIPQDLTSAMADLEMLLLYQNNLTGAVPESIASCCHNLTTINLSDNL 567

Query: 196 LNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSAL-PAELGKL 252
           L G +P  +GS   L  LDL  N I   IP S+    +L    +G N +  L PAELG +
Sbjct: 568 LGGKIPPLLGSSGALQVLDLTDNGIGGNIPPSLGISSTLWRLRLGGNKIEGLIPAELGNI 627

Query: 253 SKLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGN 308
           + L  +DL  N+L       + +C+  L+ + L+ N L G +P EIG +  L +L L+ N
Sbjct: 628 TALSFVDLSFNRLAGAIPSILASCK-NLTHIKLNGNRLQGRIPEEIGGLKQLGELDLSQN 686

Query: 309 PL-RTLRSSLVNG-PTPALLKY----LRSRLP--------------ENEDSEA---STTK 345
            L   +  S+++G P  + LK     L  R+P              +  D E    ++  
Sbjct: 687 ELIGEIPGSIISGCPKISTLKLAENRLSGRIPAALGILQSLQFLELQGNDLEGQIPASIG 746

Query: 346 EDLITMATRLS------------------VTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              + +   LS                   TS +LS   +N  +IP E+    ++  L+L
Sbjct: 747 NCGLLLEVNLSHNSLQGGIPRELGKLQNLQTSLDLSFNRLN-GSIPPELGMLSKLEVLNL 805

Query: 388 SRNSIQELPPE 398
           S N+I  + PE
Sbjct: 806 SSNAISGMIPE 816



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 129/314 (41%), Gaps = 26/314 (8%)

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLL 305
           + +  L KL  LDL +N             L  L L+ NSL+G LP  I   T L +LL+
Sbjct: 70  SAIAHLDKLELLDLSNNSFSGPMPSQLPASLRSLRLNENSLTGPLPASIANATLLTELLV 129

Query: 306 TGN--------------PLRTLRSS--LVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
             N               LR LR+   L +GP P  +  L S ++    + E S      
Sbjct: 130 YSNLLSGSIPSEIGRLSKLRVLRAGDNLFSGPIPDSIAGLHSLQILGLANCELSGGIPRG 189

Query: 349 ITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQ 406
           I     L    + L L   NLS  IP E+ +  ++T L LS N +   +P  +S  A+LQ
Sbjct: 190 IGQLAAL----ESLMLHYNNLSGGIPPEVTQCRQLTVLGLSENRLTGPIPRGISDLAALQ 245

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           TL +  N +       +     L  L L  N L     D    +  L+ LDLS N  S P
Sbjct: 246 TLSIFNNSLSGSVPEEVGQCRQLLYLNLQGNDLTGQLPDSLAKLAALETLDLSENSISGP 305

Query: 467 ENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLT 524
                 SL  L+ L L   QL  E P+ I  L +L  L L  N L   IP       SL 
Sbjct: 306 IPDWIGSLASLENLALSMNQLSGEIPSSIGGLARLEQLFLGSNRLSGEIPGEIGECRSLQ 365

Query: 525 ELDLSDNNISALPP 538
            LDLS N ++   P
Sbjct: 366 RLDLSSNRLTGTIP 379



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 115/274 (41%), Gaps = 46/274 (16%)

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +L +LDLSNNS SG +P ++    +LR L L  N L         GP PA +        
Sbjct: 77  KLELLDLSNNSFSGPMPSQL--PASLRSLRLNENSL--------TGPLPASIAN------ 120

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--- 391
                          T+ T L V S  LS       +IPSEI   G ++KL + R     
Sbjct: 121 --------------ATLLTELLVYSNLLS------GSIPSEI---GRLSKLRVLRAGDNL 157

Query: 392 -IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
               +P  ++   SLQ L L+  ++       +  L++L  L L  N L           
Sbjct: 158 FSGPIPDSIAGLHSLQILGLANCELSGGIPRGIGQLAALESLMLHYNNLSGGIPPEVTQC 217

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNS 509
             L +L LS N  + P     S L  LQ L +    L    P ++ + +QL  L+L  N 
Sbjct: 218 RQLTVLGLSENRLTGPIPRGISDLAALQTLSIFNNSLSGSVPEEVGQCRQLLYLNLQGND 277

Query: 510 LQS-IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           L   +P+    L +L  LDLS+N+IS   P+ + 
Sbjct: 278 LTGQLPDSLAKLAALETLDLSENSISGPIPDWIG 311


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G    LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 221/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
              L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 FRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 210/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNFRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G    L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLS 328


>gi|320169123|gb|EFW46022.1| leucine-rich repeat-containing protein 28 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 1067

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 36/310 (11%)

Query: 38  GDKW---WEAV-------DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAA 86
            D W   W+ V        +Q L ++HN +  L  E L  L  L  L +SHN+L+ +PA 
Sbjct: 13  ADLWCALWDFVADIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPAT 72

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L  LD+S+N++ ++PD IG    L +FD   NQL ELP S+   ++L   +A +
Sbjct: 73  IGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVD 132

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + + P  L     + KLD+  NK+T L    I +   L +L   KNLL  +P+ I  L
Sbjct: 133 NQLKAFPIALCQLPALEKLDLSNNKITELP-AAIGNMPRLVKLTLDKNLLTSLPDAICLL 191

Query: 207 SRLIRLDLHQNRILSIPSSISG----------CCSLAEFY-------------MGNNALS 243
             L +L + +NRIL +P ++S             SL  F              +  N L+
Sbjct: 192 VNLRQLTISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDLSRNNLT 251

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ++P E+ +L  L  L+L SNQ++E  +  C LR L+ LDL  N ++  P E   +  L  
Sbjct: 252 SIPPEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMITTFPYEFLALRHLDD 311

Query: 303 LLLTGNPLRT 312
           L + GNPL+T
Sbjct: 312 LKIVGNPLKT 321



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 147/329 (44%), Gaps = 24/329 (7%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           D+     +  L V  N LT L +  +     L  L  S N L  +P TIG L+ L  LDL
Sbjct: 25  DIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPATIGQLTELTLLDL 84

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N +  +P SI     L  F +  N L+ LP  +  +  L  L    NQLK + +  CQ
Sbjct: 85  SYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIALCQ 144

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYL- 329
           L  L  LDLSNN ++ LP  IG M  L KL L  N L +L  +   LVN      L+ L 
Sbjct: 145 LPALEKLDLSNNKITELPAAIGNMPRLVKLTLDKNLLTSLPDAICLLVN------LRQLT 198

Query: 330 --RSR---LPENEDS-----EASTTKEDLITMATRL--SVTSKELSLEGMNLSAIPSEIW 377
             R+R   LP N                L++    L      ++L L   NL++IP EI 
Sbjct: 199 ISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDLSRNNLTSIPPEIL 258

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           E   + KL+L  N I+E+P  L     L +L L +N I  +P   L +L  L  LK+  N
Sbjct: 259 ELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMITTFPYEFL-ALRHLDDLKIVGN 317

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           PL+   +     IP L+ L     + S P
Sbjct: 318 PLKTKFTARAVRIPTLKELAARQVLVSPP 346



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 33/328 (10%)

Query: 220 LSIPSSISGCCSLAEF-------------YMGNNALSALPAE-LGKLSKLGTLDLHSNQL 265
           L +P+S    C+L +F             Y+ +N L+ LP+E LG+L  L  L L  N+L
Sbjct: 7   LVMPNSADLWCALWDFVADIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNEL 66

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                   QL  L++LDLS N+L+ LP  IG++  L++  +  N L  L  S+       
Sbjct: 67  TSVPATIGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMS-----G 121

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           ++   R R  +N+          L  +        ++L L    ++ +P+ I     + K
Sbjct: 122 MVSLYRLRAVDNQLKAFPIALCQLPAL--------EKLDLSNNKITELPAAIGNMPRLVK 173

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L +N +  LP  +    +L+ L +SRN+I D P  + + L  +  +    + L   P 
Sbjct: 174 LTLDKNLLTSLPDAICLLVNLRQLTISRNRILDLPHNV-SQLHHMISVPWYASSLVSFPP 232

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
               ++  ++ LDLS N + S+P  P    L +L++L LR  Q+RE P  +  L++L  L
Sbjct: 233 H-LLELRNVRQLDLSRNNLTSIP--PEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSL 289

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           DL +N + + P  F  L  L +L +  N
Sbjct: 290 DLGKNMITTFPYEFLALRHLDDLKIVGN 317



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 35/273 (12%)

Query: 14  LNLSNRSLRDVPNEV-----YKNFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKED 63
           L+LS  +L ++P+ +      K FD          D     V L +L    N ++     
Sbjct: 82  LDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIA 141

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  LP L  L++S+NK++ELPAAIG +  L  L +  N +  +PD I     L +   S 
Sbjct: 142 LCQLPALEKLDLSNNKITELPAAIGNMPRLVKLTLDKNLLTSLPDAICLLVNLRQLTISR 201

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N++ +LP ++ +  ++       + + S P  L +   + +LD+                
Sbjct: 202 NRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDL---------------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                   S+N L  +P  I  L  L +L+L  N+I  IP  +     L    +G N ++
Sbjct: 246 --------SRNNLTSIPPEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMIT 297

Query: 244 ALPAELGKLSKLGTLDLHSNQLK-EYCVEACQL 275
             P E   L  L  L +  N LK ++   A ++
Sbjct: 298 TFPYEFLALRHLDDLKIVGNPLKTKFTARAVRI 330



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 24/117 (20%)

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           A +  L  +  L + +N L  +PS+G   +  L  L LS+N                   
Sbjct: 24  ADIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHN------------------- 64

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
                +L   P  I +L +L +LDLS N+L  +P+    L  L   D+  N ++ LP
Sbjct: 65  -----ELTSVPATIGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELP 116


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 187/413 (45%), Gaps = 54/413 (13%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           IL+ A T   L+L    L D+P  +++                L++LILA N I+ L  D
Sbjct: 37  ILRHAGTLEELSLEGNQLTDLPKGIFR-------------MTKLRRLILADNEIQDLTND 83

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  L  L+ S N +  +P +I     L  LD+S N++ ++PD +     L  +  + 
Sbjct: 84  ISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIAND 143

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
             L E+P  +G   NL   +   NCI  LP   +  SK+ +LD+ GN+L  L +  I   
Sbjct: 144 IALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDT-IGQL 202

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L EL    N L  +P  IG L  L  LD+ +NRI  +P  IS   SL + +  +NAL 
Sbjct: 203 TCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALH 262

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            LP  +G L KL  L +  N++ E   C+  C   L V+ LS N +  LP  IGK++ L 
Sbjct: 263 ELPQGIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEVV-LSENVIEFLPAAIGKLSNLT 321

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L +  N L T    + N                                 T+LSV    
Sbjct: 322 LLNIDRNRLFTFPPEIGN--------------------------------CTKLSV---- 345

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           LS     +  IP EI     +T L LS N ++ LP  +S+   L+ L LS+N+
Sbjct: 346 LSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLPFAVST-LPLKALWLSQNQ 397



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 181/403 (44%), Gaps = 44/403 (10%)

Query: 138 NLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           NL     S+  +T++ ED L     + +L +EGN+LT L    I   T L  LI + N +
Sbjct: 19  NLDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKG-IFRMTKLRRLILADNEI 77

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +   I SL  L  LD  +N +  +P SI  C  L    + +N L  LP  L KL    
Sbjct: 78  QDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKL---- 133

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                 NQLK +             ++N+ +L+ +PPEIG ++ L  L L  N ++ L  
Sbjct: 134 ------NQLKTW-------------IANDIALTEIPPEIGSLSNLVVLELRENCIKFLPL 174

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           S        L K  R  L  NE  E   T   L  +         EL L+   L+ +PSE
Sbjct: 175 SF-----SFLSKLERLDLGGNELEELPDTIGQLTCLI--------ELWLDNNFLTTLPSE 221

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I E   +  LD+S N I+ELP E+S+  SL  L  + N + + P  I   L  L  LK+D
Sbjct: 222 IGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGI-GCLIKLQILKVD 280

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            N + ++ +D       L  + LS N I  LP       L +L  L + R +L   P +I
Sbjct: 281 QNEIDEI-TDCIGGCTNLLEVVLSENVIEFLP--AAIGKLSNLTLLNIDRNRLFTFPPEI 337

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
               +L +L    N +  IP+   +  SLT L LS N + +LP
Sbjct: 338 GNCTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLP 380



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 9/200 (4%)

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           +T  ED++  A  L    +ELSLEG  L+ +P  I+   ++ +L L+ N IQ+L  ++SS
Sbjct: 31  TTVTEDILRHAGTL----EELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQDLTNDISS 86

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L+ L  S+N ++  PD+I  +   L+ L + +N L ++P    K   + Q+     N
Sbjct: 87  LIALEELDFSKNDVRVVPDSI-QNCKKLTFLDISSNTLGELPDSLTK---LNQLKTWIAN 142

Query: 462 IASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
             +L E PP   SL +L  L LR   ++  P     L +L  LDL  N L+ +P+    L
Sbjct: 143 DIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQL 202

Query: 521 TSLTELDLSDNNISALPPEL 540
           T L EL L +N ++ LP E+
Sbjct: 203 TCLIELWLDNNFLTTLPSEI 222



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           IL    +L  L L+ N L  +P   F+   + +++     I  L  +   SSL  L+EL 
Sbjct: 37  ILRHAGTLEELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQDLTND--ISSLIALEELD 94

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             +  +R  P  I   ++L  LD+S N+L  +P+    L  L     +D  ++ +PPE+ 
Sbjct: 95  FSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEIPPEIG 154

Query: 542 SV 543
           S+
Sbjct: 155 SL 156



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  V  D  +    L+ L L  N +  LP+      +  L+ L L   ++++   DI  L
Sbjct: 30  LTTVTEDILRHAGTLEELSLEGNQLTDLPKG--IFRMTKLRRLILADNEIQDLTNDISSL 87

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L  LD S+N ++ +P+  +N   LT LD+S N +  LP  L  +
Sbjct: 88  IALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKL 133


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 15/352 (4%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S+ +L+ LP  IGEL  L+ L++  N +  +P+EIG    L   
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +   NQ   LP+ +G+  NL +   S N +T+ P D+     + +L +  N+LT L N+ 
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L    N L  +P  IG L +L RL L +N++ ++   I     L    +  
Sbjct: 153 IGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNG 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L  L L+ NQLK    +  +L+ L VL + +N L  LP EIG++ 
Sbjct: 213 NQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 272

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L L  N L+TL   +       +L    + L        +  KE  I     L+V 
Sbjct: 273 NLQELYLYTNQLKTLPKEIGELQNLTVLDLHINEL-------KTLPKE--IGELQNLTV- 322

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
              L L    L  +P EI E   +T LDL  N ++ LP E+     L+ L L
Sbjct: 323 ---LDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHL 371



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 125/264 (47%), Gaps = 23/264 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  L  D+  L  L VL++ HN+L+ LP  IG+L  L+ L +  N +  
Sbjct: 135 NLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKT 194

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG    L   D + NQL  LP  +G   NL +     N + +LP D+ +   +  L
Sbjct: 195 LSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVL 254

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L EL    N L  +P+ IG L  L  LDLH N + ++P  
Sbjct: 255 HIGSNQLKTLPKE-IGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKE 313

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I    +L    + NN L  LP E+G+L                        L+VLDL NN
Sbjct: 314 IGELQNLTVLDLRNNELKTLPKEIGELQS----------------------LTVLDLRNN 351

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNP 309
            L  LP EIGK+  LRKL L   P
Sbjct: 352 ELKTLPNEIGKLKELRKLHLDDIP 375



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 173/396 (43%), Gaps = 85/396 (21%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +T+LP+++ +   +  L++  N+LT L N  I     L  L   KN    +P  IG
Sbjct: 50  SNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNE-IGKLQNLQLLNLDKNQFTALPNDIG 108

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  L L  N++ + P+ I    +L E ++  N L+ LP ++G+L            
Sbjct: 109 KLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQ----------- 157

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                       L VLDL +N L+ LP +IGK+  L +L L  N L+TL   +       
Sbjct: 158 -----------NLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEI------- 199

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
              YL+                        L V    L L G  L+ +P EI E   + +
Sbjct: 200 --GYLKE-----------------------LQV----LDLNGNQLTTLPKEIGELKNLRE 230

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L +N ++ LP ++    +LQ L +  N++K  P  I   L +L  L L  N L+ +P 
Sbjct: 231 LHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEI-GELQNLQELYLYTNQLKTLPK 289

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           +   ++  L +LDL  N                        +L+  P +I  LQ L +LD
Sbjct: 290 E-IGELQNLTVLDLHIN------------------------ELKTLPKEIGELQNLTVLD 324

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  N L+++P+    L SLT LDL +N +  LP E+
Sbjct: 325 LRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI 360



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 33/304 (10%)

Query: 252 LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
           L K+GTL          L + ++  Y    EA Q    + +LDLSN  L+ LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQ 65

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L L  N L TL         P  +  L++    N D    T   + I     L   
Sbjct: 66  NLRILNLYRNQLTTL---------PNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNL--- 113

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L+  P++I +   + +L LS N +  LP ++    +LQ L L  N++   
Sbjct: 114 -QELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTL 172

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
           P+ I   L  L  L L  N L+ +  + G+  +  LQ+LDL+ N + +LP+      L +
Sbjct: 173 PNDI-GKLQKLERLSLIENQLKTLSKEIGY--LKELQVLDLNGNQLTTLPK--EIGELKN 227

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+EL+L + QL+  P DI  L+ L++L +  N L+++P+    L +L EL L  N +  L
Sbjct: 228 LRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTL 287

Query: 537 PPEL 540
           P E+
Sbjct: 288 PKEI 291



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L++L L  N ++ L  D+  L  L VL++  N+L  LP  IGEL  L+ L +  N 
Sbjct: 224 ELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQ 283

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L   D   N+LK LP  +G   NL+     NN + +LP+++ +   +
Sbjct: 284 LKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSL 343

Query: 163 SKLDVEGNKLTVLSNNL 179
           + LD+  N+L  L N +
Sbjct: 344 TVLDLRNNELKTLPNEI 360



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L    L+ +PN++              E  +LQ L +  N ++ L +++  L  L  
Sbjct: 230 ELHLYKNQLKTLPNDI-------------GELKNLQVLHIGSNQLKTLPKEIGELQNLQE 276

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L  LP  IGEL  L  LD+  N +  +P EIG    L   D  +N+LK LP  
Sbjct: 277 LYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKE 336

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           +G   +L+     NN + +LP ++    ++ KL ++
Sbjct: 337 IGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLD 372


>gi|194745132|ref|XP_001955046.1| GF16442 [Drosophila ananassae]
 gi|190628083|gb|EDV43607.1| GF16442 [Drosophila ananassae]
          Length = 1847

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LP  +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 181/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N+++ LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N                          
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGN-------------------------- 288

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                      V  +EL L    LS +P  I +  +++ L++ RN+++ LP E+  CA+L
Sbjct: 289 ----------CVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKRLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCVNMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPEL 355



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 23/320 (7%)

Query: 226 ISGCCSLAEFYMGNN-ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             GC    EF    + +L  +P E+ + S+ L  L L +N +++      +L RL  L L
Sbjct: 8   FKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGL 67

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N ++ LPP+I     L +L ++ N +  +         P  +K+L+S    +  S   
Sbjct: 68  SDNEINRLPPDIQNFENLVELDVSRNDIPDI---------PDDIKHLQSLQVADFSSNPI 118

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                  +    L+V    L L  M+L+ +P++     ++  L+L  N ++ LP  +S  
Sbjct: 119 PKLPSGFSQLKNLTV----LGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQL 174

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN 461
             L+ L L  N+I+D P   L  L  L  L LD+N L+++P + G   +  L  LD+S N
Sbjct: 175 TKLKRLDLGDNEIEDLP-PYLGYLPGLHELWLDHNQLQRLPPELGL--LTKLTYLDVSEN 231

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            +  LP     S L  L +L L +  L   P  I +L +L IL L QN LQ + +   N 
Sbjct: 232 RLEELPNE--ISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 521 TSLTELDLSDNNISALPPEL 540
            ++ EL L++N +S LPP +
Sbjct: 290 VNMQELILTENFLSELPPSI 309



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL    +L  L LD N +R +P + F+ +  L+ L LS N I  LP  P   +  +L
Sbjct: 29  PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEINRLP--PDIQNFENL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + + P DI  LQ L++ D S N +  +P GF  L +LT L L+D +++ LP
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 538 PELVSV 543
            +  S+
Sbjct: 146 ADFGSL 151


>gi|51092111|gb|AAT94469.1| RE02389p [Drosophila melanogaster]
          Length = 1756

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G++ 
Sbjct: 254 NLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMI 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP +I K++ L  L L  N L+ L  +L N               EN         
Sbjct: 255 LLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNC--------------EN--------- 291

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L
Sbjct: 292 -------------MQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPLEIGQCANL 338

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             L L  NK+K  P   L + + L  L +  N L  +P
Sbjct: 339 GVLSLRDNKLKKLPPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+D+A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDDIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG + +L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDDI-A 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPEL
Sbjct: 300 NFLSELPASIGQMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPEL
Sbjct: 210 LQRLPPEL 217



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 152/317 (47%), Gaps = 23/317 (7%)

Query: 226 ISGCCSLAEFYMGNN-ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             GC    EF    + +L  +P E+ + S+ L  L L +N +++      +L RL  L L
Sbjct: 8   FKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGL 67

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N +  LPP+I     L +L ++ N +  +         P  +K+L+S    +  S   
Sbjct: 68  SDNEIGRLPPDIQNFENLVELDVSRNDIPDI---------PDDIKHLQSLQVADFSSNPI 118

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                  +    L+V    L L  M+L+ +P++     ++  L+L  N ++ LP  +S  
Sbjct: 119 PKLPSGFSQLKNLTV----LGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQL 174

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN 461
             L+ L L  N+I+D P   L  L  L  L LD+N L+++P + G   +  L  LD+S N
Sbjct: 175 TKLKRLDLGDNEIEDLP-PYLGYLPGLHELWLDHNQLQRLPPELGL--LTKLTYLDVSEN 231

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            +  LP     S L  L +L L +  L   P DI +L +L IL L QN LQ + +   N 
Sbjct: 232 RLEELPNE--ISGLVSLTDLDLAQNLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 521 TSLTELDLSDNNISALP 537
            ++ EL L++N +S LP
Sbjct: 290 ENMQELILTENFLSELP 306


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 186/401 (46%), Gaps = 19/401 (4%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L +++  L  L  L++  N+L+ 
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLAT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            PA I EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL   
Sbjct: 86  FPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  
Sbjct: 146 NLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L +N++ + P  I    +L E  + NN L+ALP E+G+L  L  L+L  
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSE 264

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL  +  E  QL +L  L LS N L  LP EIG++  L+ L L+ N L  L   +    
Sbjct: 265 NQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLK 324

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
              +L    ++         + +K+            S         L+ +P+EI +   
Sbjct: 325 NLQMLDLCYNQF-------KTVSKKIGQLKNLLQLNLSYN------QLATLPAEIGQLKN 371

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +  LDL  N +  LP E+    +L  L L  N++   P  I
Sbjct: 372 LYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 412



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 15/303 (4%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 140 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + D  +N+L  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTA 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+L +L    I     L +
Sbjct: 247 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKE-IGQLEKLQD 305

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P+ IG L  L  LDL  N+  ++   I    +L +  +  N L+ LPAE
Sbjct: 306 LGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAE 365

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  LDL +NQL     E  QL+ L  L L  N L+ LP EIG++  L+ LLL+ 
Sbjct: 366 IGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIGQLKKLQWLLLSV 425

Query: 308 NPL 310
           NP+
Sbjct: 426 NPI 428



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 148/325 (45%), Gaps = 38/325 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +PNE+ +               +LQ+L L  N +    +++  L  L  
Sbjct: 98  SLDLSENRLVMLPNEIGR-------------LQNLQELGLYKNKLITFPKEIGQLRNLQT 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  IG+L  L+ L++  N +  +P EIG    L   +   NQL  LP  
Sbjct: 145 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+ P+++     + +LD+  N+LT L    I     L  L  S
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQLKNLENLELS 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L   P+ IG L +L  L L  NR++ +P  I     L +  +  N L  LP E+G+L
Sbjct: 264 ENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQL 323

Query: 253 SKLGTLDLHSNQLKEYC-----------------------VEACQLR-LSVLDLSNNSLS 288
             L  LDL  NQ K                           E  QL+ L  LDL  N L+
Sbjct: 324 KNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLT 383

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
            LP EIG++  L  L L  N L TL
Sbjct: 384 TLPKEIGQLKNLYNLGLGTNQLTTL 408



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 189/414 (45%), Gaps = 41/414 (9%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPA-VIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++++ P  I    +L    + +N L+ LP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L+L  N+L     E  QL+ L  L+L +N L+ LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L T          P  +  L                E+L           +EL L  
Sbjct: 218 ENQLTTF---------PKEIGQL----------------ENL-----------QELDLWN 241

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+A+P EI +   +  L+LS N +   P E+     LQ L LS N++   P  I   L
Sbjct: 242 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI-GQL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
             L  L L  N L  +P +    +  LQ+LDL YN      +     L +L +L L   Q
Sbjct: 301 EKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCYNQFK-TVSKKIGQLKNLLQLNLSYNQ 358

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   P +I +L+ L  LDL  N L ++P+    L +L  L L  N ++ LP E+
Sbjct: 359 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 412



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 150/334 (44%), Gaps = 35/334 (10%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +  N L 
Sbjct: 232 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLV 291

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-------------------- 282
            LP E+G+L KL  L L  N+L     E  QL+ L +LDL                    
Sbjct: 292 ILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQ 351

Query: 283 ---SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
              S N L+ LP EIG++  L  L L  N L TL
Sbjct: 352 LNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTL 385


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L   +  +NQL  LP 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  N      S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L VLDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N   +  + +   I     L +    LSL    L+
Sbjct: 266 KTVSEEI------GQLKNLQMLFLNNNQLKTLSAE---IGQLKNLQM----LSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P+EI +   + +L LS N ++ L  E+    +L+ L L  N++   P  I
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 165/335 (49%), Gaps = 19/335 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L++  N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG          S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  L  EIG++  L+ L L  N L TL + +        LK LR         E   
Sbjct: 285 NNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR---------ELHL 329

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEI 376
           +   L T++  +      K+LSL    L+ +P EI
Sbjct: 330 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 161/354 (45%), Gaps = 65/354 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL + ++ ++P  I    +L    + NN L+ LP E+G+L  L  L+L +NQL     E
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+    L LS N L+ LP EIG++  LR+L L  N              P  +  L+
Sbjct: 111 IGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF---------PKEIGQLK 161

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            ++L+L    L  +P+EI +   + +L LS N
Sbjct: 162 NL---------------------------QQLNLYANQLKTLPNEIGQLQNLRELHLSYN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            ++ L  E+    +LQ L L+ N++K  P  I   L +L  L L+NN  + VP +    +
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQVLDLNNNQFKTVPEE-IGQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ+LDL YN   ++ E      L +LQ L+L   QL+    +I +L+ L++L L+ N 
Sbjct: 253 KNLQVLDLGYNQFKTVSE--EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQ 310

Query: 510 LQSIPEGFKNLTSLTELDLS-----------------------DNNISALPPEL 540
           L ++P   + L +L EL LS                       DN ++ LP E+
Sbjct: 311 LTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 164/362 (45%), Gaps = 48/362 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+++     +  L++  N+L  L    I     L  L    N
Sbjct: 49  RVLDLSEQK-----LKTLPKEIGQLQNLQVLELNNNQLATLPKE-IGQLKNLQWLNLVTN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L     L L +NR+ ++P  I    +L E Y+  N  +A P E+G+L  
Sbjct: 103 QLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++  L+ L L  N L+TL
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L++                       L V    L L       +P
Sbjct: 223 ---------PKEIGQLKN-----------------------LQV----LDLNNNQFKTVP 246

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  LDL  N  + +  E+    +LQ L L+ N++K    A +  L +L  L 
Sbjct: 247 EEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTL-SAEIGQLKNLQMLS 305

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L+ N L  +P++  + +  L+ L LSYN + +L        L +L++L LR  QL   P 
Sbjct: 306 LNANQLTTLPNE-IRQLKNLRELHLSYNQLKTLS--AEIGQLKNLKKLSLRDNQLTTLPK 362

Query: 493 DI 494
           +I
Sbjct: 363 EI 364



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +   
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN + +L  ++     +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            N L  +   IG L  L +L L  N++ ++P  I
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 192/441 (43%), Gaps = 85/441 (19%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           AA     L+LS + L  +P E+ K                L+KLIL  +  ++       
Sbjct: 14  AAEGWEELDLSGKGLTTLPPEIGK-------------LTQLKKLILGKHKYDQG------ 54

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                +++   NKLSELP  IG L  L+ L +  N +  +P EI   T L       NQL
Sbjct: 55  ----YIIDTIGNKLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQL 110

Query: 127 KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             LP+ + R  NL     S NN +  LP ++   S +  L + GNKL+            
Sbjct: 111 SSLPAEIARLSNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLS------------ 158

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                        +P  +  LS L  LDL  N++ S+P+ I+   +L    + +N LS+L
Sbjct: 159 ------------SLPTEVVQLSNLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSL 206

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           PAE+ +LS L  LDL  N+L     E  QL  L  LDL  N LS LP EI +++ L+ L 
Sbjct: 207 PAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLN 266

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           LT N L +L                                  LI +    S+ S  L+L
Sbjct: 267 LTSNQLNSL----------------------------------LIEIFQLTSLQS--LNL 290

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               LS++P EI +   +  L+LS N +  LP E+     LQ+L L  N++   P  I  
Sbjct: 291 SHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGH 350

Query: 425 SLSSLSCLKLDNNPLRQVPSD 445
               L  L LDNNPL+ +P++
Sbjct: 351 LHLHLKVLTLDNNPLKFLPAE 371



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 27/296 (9%)

Query: 46  DLQKLILAHNN-IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +LQ L L++NN +  L  ++  L  L  L +  NKLS LP  + +L  L++LD+ +N + 
Sbjct: 122 NLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLS 181

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI   + L   D   N+L  LP+ + +  NL +   S N ++SLP ++   S +  
Sbjct: 182 SLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQN 241

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+                         +P  I  LS L  L+L  N++ S+  
Sbjct: 242 LDLRYNQLS------------------------NLPVEIVQLSNLQSLNLTSNQLNSLLI 277

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    SL    + +N LS+LP E+G+L+ L +L+L  N+L     E  QL  L  L+L 
Sbjct: 278 EIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLR 337

Query: 284 NNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           NN L+ LP EIG +   L+ L L  NPL+ L + + N  +  +L + + +L +  D
Sbjct: 338 NNQLNRLPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHSQRILNFYKQQLEQTID 393



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 182/398 (45%), Gaps = 76/398 (19%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK-------------NLLNGMPETI 203
           A      +LD+ G  LT L    I   T L +LI  K             N L+ +P+ I
Sbjct: 13  AAAEGWEELDLSGKGLTTLPPE-IGKLTQLKKLILGKHKYDQGYIIDTIGNKLSELPKEI 71

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L++L  L + +N++ ++P+ I    +L   ++  N LS+LPAE+ +LS L +LDL  N
Sbjct: 72  GWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSYN 131

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                                N L GLP EI +++ L+ L L GN L +L + +V     
Sbjct: 132 ---------------------NKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVV----- 165

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                         +LS   + L L    LS++P+EI +   + 
Sbjct: 166 ------------------------------QLS-NLQNLDLRYNQLSSLPAEIAQLSNLQ 194

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            LDL  N +  LP E++  ++LQ L LS NK+   P A +  LS+L  L L  N L  +P
Sbjct: 195 NLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLP-AEIVQLSNLQNLDLRYNQLSNLP 253

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            +  + +  LQ L+L+ N + SL        L  LQ L L   +L   P +I +L  L+ 
Sbjct: 254 VEIVQ-LSNLQSLNLTSNQLNSLL--IEIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQS 310

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+LS N L S+P     LT L  L+L +N ++ LP E+
Sbjct: 311 LNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEI 348



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 138/266 (51%), Gaps = 29/266 (10%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS   L+ LPPEIGK+T L+KL+L  +                  KY +  + +   +
Sbjct: 21  LDLSGKGLTTLPPEIGKLTQLKKLILGKH------------------KYDQGYIIDTIGN 62

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           + S   +++  +A       +EL +    L  +P+EI +   +  L L  N +  LP E+
Sbjct: 63  KLSELPKEIGWLAQ-----LEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEI 117

Query: 400 SSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +  ++LQ+L LS N K+   P A +  LS+L  L+L  N L  +P++  + +  LQ LDL
Sbjct: 118 ARLSNLQSLDLSYNNKLIGLP-AEIVQLSNLQSLRLRGNKLSSLPTEVVQ-LSNLQNLDL 175

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
            YN ++SLP     + L +LQ L L   +L   P +I +L  L+ LDLS N L S+P   
Sbjct: 176 RYNQLSSLP--AEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEI 233

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L++L  LDL  N +S LP E+V +
Sbjct: 234 VQLSNLQNLDLRYNQLSNLPVEIVQL 259



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 20/216 (9%)

Query: 344 TKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSR------------- 389
           T+E+L+ +  + +    +EL L G  L+ +P EI +  ++ KL L +             
Sbjct: 2   TEEELLQVIEKAAAEGWEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIG 61

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N + ELP E+   A L+ L + RN++ + P A +  L++L  L L+ N L  +P++    
Sbjct: 62  NKLSELPKEIGWLAQLEELQIIRNQLDNLP-AEIVQLTNLQSLHLEENQLSSLPAE-IAR 119

Query: 450 IPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +  LQ LDLSYN  +  LP       L +LQ L LR  +L   PT++++L  L+ LDL  
Sbjct: 120 LSNLQSLDLSYNNKLIGLP--AEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRY 177

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N L S+P     L++L  LDL  N +S+LP E+  +
Sbjct: 178 NQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQL 213


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 214/438 (48%), Gaps = 60/438 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTV 72
           L+L +  LR++P+ VY               +D L  L L  N I  +++D++NL  L++
Sbjct: 163 LDLRHNKLREIPSVVY--------------GLDSLTTLYLRFNRITTVEKDIKNLSKLSM 208

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  NK+ +LPA IG+L  L +LDV+ N +  +P EIG+ T +   D   N+L +LP +
Sbjct: 209 LSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDT 268

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  +
Sbjct: 269 IGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 328

Query: 193 KNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP +
Sbjct: 329 RNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 386

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  
Sbjct: 387 FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEE 446

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L +L         P  + YL+                DL           ++L L   
Sbjct: 447 NKLESL---------PNEIAYLK----------------DL-----------QKLVLTNN 470

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSL 426
            L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   
Sbjct: 471 QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALC 529

Query: 427 SSLSCLKLDNNPLRQVPS 444
           S LS + ++N PL  +P+
Sbjct: 530 SKLSIMSIENCPLSHLPA 547



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 218/454 (48%), Gaps = 39/454 (8%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I             N+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSI-----------KXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 153

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 154 LDNLKKLRMLDLRHNKLREIPS-VVYGLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 212

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 213 ENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 272

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 273 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 332

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 333 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 377

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 378 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 435

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 436 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 493

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 494 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 527



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 225/466 (48%), Gaps = 51/466 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS RS+  +P+ +  N  ++   +     V+L  L L+ N++  L + L NL  L +L
Sbjct: 105 LDLSKRSIHILPSSIKXNKLQSLPAEVGC-LVNLMTLALSENSLTSLPDSLDNLKKLRML 163

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ HNKL E+P+ +  L  L +L + FN I  +  +I + + L       N++K+LP+ +
Sbjct: 164 DLRHNKLREIPSVVYGLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEI 223

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL     ++N +  LP+++ +C++++ LD++ N+L                     
Sbjct: 224 GDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELL-------------------- 263

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKL 252
                +P+TIG+LS L RL L  NR+ +IP S++ C +L E  + NN +S LP   L  L
Sbjct: 264 ----DLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSL 319

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNP 309
            KL +L L  N  + Y V       ++  L++ +N ++ +P  I  +   L KL +  N 
Sbjct: 320 VKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 379

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L +L        +   L    ++L +  +  +     +++ ++  L             L
Sbjct: 380 LTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL-------------L 426

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             +P  +    ++ +LDL  N ++ LP E++    LQ L+L+ N++   P  I   L++L
Sbjct: 427 KKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI-GHLTNL 485

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           + L L  N L  +P    ++I  L+ L+  Y    L +NP   SLP
Sbjct: 486 THLGLGENLLTHLP----EEIGTLENLEELY----LNDNPNLHSLP 523



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 363 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 409

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 410 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 469

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 470 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 529

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 530 SKLSIMSIENCPLSHLPAQIVAG 552



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 28/204 (13%)

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           S++   L ++P+E+     +  L LS NS+  LP  L +   L+ L L  NK+++ P ++
Sbjct: 118 SIKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIP-SV 176

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
           +  L SL+ L L  N +  V  D  K++  L +L +  N I  LP       L +L  L 
Sbjct: 177 VYGLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAE--IGDLCNLITLD 233

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN--------- 532
           +   QL   P +I    Q+  LDL  N L  +P+   NL+SL+ L L  N          
Sbjct: 234 VAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLA 293

Query: 533 --------------ISALPPELVS 542
                         IS LP  L+S
Sbjct: 294 KCSALEELNLENNNISTLPESLLS 317


>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
 gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
          Length = 608

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 210/446 (47%), Gaps = 54/446 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  VYK         ++             N I  + +D+RNL  LT+L
Sbjct: 197 LDLRHNKLNEIPEVVYKLTTLTTLFLRF-------------NRIRVVDDDIRNLSNLTML 243

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP  IG L  L + DVS N +  +P EIG    L   D   N+L ++P ++
Sbjct: 244 SLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPETI 303

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N + ++P+ L +CS+M + +VEGN ++ L   L+AS + LT +  S+
Sbjct: 304 GNLQLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISR 363

Query: 194 NLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N +   P       + +  ++L  N I  IP  I +   +LA+  M  N L++LP ++G 
Sbjct: 364 NNMTSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGT 423

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +N+L +   +  C   L VL LSNN L  +P  +G +  LR L L  N +
Sbjct: 424 WTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRI 483

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L         P  + +LR                DL    T+L + S ++S+      
Sbjct: 484 EVL---------PNEIGFLR----------------DL----TKLIIHSNQISV------ 508

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSL 429
            +P  I     +  L +  N++  LP E+ +   L++L ++ N  +   P   L    +L
Sbjct: 509 -LPRAIGHLSSLVYLSVGDNNLTSLPEEIGTLEKLESLYVNDNLNLHHLPFE-LALCKNL 566

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQI 455
             + ++N PL Q+P++  +  P L I
Sbjct: 567 HIMSIENCPLSQIPAEIVQGGPSLVI 592



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 213/475 (44%), Gaps = 64/475 (13%)

Query: 92  MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++  LD+S +SI ++P  +   T L +F    N+L  LPS +G  +NL     S N +TS
Sbjct: 124 LVSRLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTS 183

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LPE L     +  LD+  NK                        LN +PE +  L+ L  
Sbjct: 184 LPESLVSLKSLKVLDLRHNK------------------------LNEIPEVVYKLTTLTT 219

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  NRI  +   I    +L    +  N +  LP  +G L  L T D+  NQL+   +E
Sbjct: 220 LFLRFNRIRVVDDDIRNLSNLTMLSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIE 279

Query: 272 ACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             Q ++LS LDL +N L  +P  IG +  L +L L  N L T+  SL N           
Sbjct: 280 IGQCVQLSTLDLQHNELLDIPETIGNLQLLTRLGLRYNRLVTVPKSLCNC---------- 329

Query: 331 SRLPEN--EDSEASTTKEDLITMATRLSVTS--------------------KELSLEGMN 368
           SR+ E   E +  S   E L+   + L+  +                      ++LE   
Sbjct: 330 SRMDEFNVEGNSISNLPEGLLASLSDLTAITISRNNMTSYPSGGPAQFTNVHSINLEHNL 389

Query: 369 LSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           +  IP  I+  A  + KL++  N +  LP ++ +  ++  L L+ NK+   P+ I   L 
Sbjct: 390 IDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKLTKIPEDI-QCLE 448

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           SL  L L NN L+++P+ G  ++  L+ILDL  N I  LP    F  L  L +L +   Q
Sbjct: 449 SLEVLILSNNMLKRIPA-GMGNLRKLRILDLEENRIEVLPNEIGF--LRDLTKLIIHSNQ 505

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           +   P  I  L  L  L +  N+L S+PE    L  L  L ++DN N+  LP EL
Sbjct: 506 ISVLPRAIGHLSSLVYLSVGDNNLTSLPEEIGTLEKLESLYVNDNLNLHHLPFEL 560



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 215/498 (43%), Gaps = 114/498 (22%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ L L+ N++  L E L +L  L VL++ HNKL+E+P  + +L  L +L + FN I 
Sbjct: 169 VNLQTLALSENSLTSLPESLVSLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIR 228

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D+I + + L       N++KELP  +G  +NL+ F  S+N +  LP ++  C ++S 
Sbjct: 229 VVDDDIRNLSNLTMLSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLST 288

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+L  L RL L  NR++++P 
Sbjct: 289 LDLQHNELL------------------------DIPETIGNLQLLTRLGLRYNRLVTVPK 324

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEY---------CVEACQ 274
           S+  C  + EF +  N++S LP   L  LS L  + +  N +  Y          V +  
Sbjct: 325 SLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISRNNMTSYPSGGPAQFTNVHSIN 384

Query: 275 LR-----------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L                  L+ L++  N L+ LP +IG  T + +L L  N L       
Sbjct: 385 LEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKL------- 437

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                        +++P  ED +   + E LI              L    L  IP+ + 
Sbjct: 438 -------------TKIP--EDIQCLESLEVLI--------------LSNNMLKRIPAGMG 468

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++  LDL  N I+ LP E+     L  LI+  N+I   P AI   LSSL  L + +N
Sbjct: 469 NLRKLRILDLEENRIEVLPNEIGFLRDLTKLIIHSNQISVLPRAI-GHLSSLVYLSVGDN 527

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR-RMQLREAPTDILR 496
                                  N+ SLPE     +L  L+ LY+   + L   P ++  
Sbjct: 528 -----------------------NLTSLPEE--IGTLEKLESLYVNDNLNLHHLPFELAL 562

Query: 497 LQQLRILDLSQNSLQSIP 514
            + L I+ +    L  IP
Sbjct: 563 CKNLHIMSIENCPLSQIP 580



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +E  L G  L ++PSEI     +  L LS NS+  LP  L S  SL+ L L  NK+ + P
Sbjct: 149 EEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTSLPESLVSLKSLKVLDLRHNKLNEIP 208

Query: 420 DAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           + +                      + +LS+L+ L L  N ++++P  G   +  L   D
Sbjct: 209 EVVYKLTTLTTLFLRFNRIRVVDDDIRNLSNLTMLSLRENKIKELPP-GIGCLINLTTFD 267

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           +S+N +  LP          L  L L+  +L + P  I  LQ L  L L  N L ++P+ 
Sbjct: 268 VSHNQLEHLP--IEIGQCVQLSTLDLQHNELLDIPETIGNLQLLTRLGLRYNRLVTVPKS 325

Query: 517 FKNLTSLTELDLSDNNISALPPELVS 542
             N + + E ++  N+IS LP  L++
Sbjct: 326 LCNCSRMDEFNVEGNSISNLPEGLLA 351


>gi|71981160|ref|NP_741391.2| Protein SOC-2, isoform b [Caenorhabditis elegans]
 gi|351065206|emb|CCD61152.1| Protein SOC-2, isoform b [Caenorhabditis elegans]
          Length = 558

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 211/439 (48%), Gaps = 39/439 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK     G  +  W         L +N I  + E + NL  L +
Sbjct: 145 TLDLRHNKLTEVPSVIYK----IGSLETLW---------LRYNRIVAVDEQIGNLSKLKM 191

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 192 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS 251

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ +NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 252 IGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 311

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 312 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 369

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 370 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEE 429

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++T+   +    + ++L L 
Sbjct: 430 NELETVPTEI------GFLQHL---------TKLWVQSNKILTLPRSIGNLCSLQDLRLG 474

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL+ + +  + +   P  I  
Sbjct: 475 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITA 534

Query: 425 SLSSLSCLKLD-NNPLRQV 442
              SL    L    P R V
Sbjct: 535 GGPSLVIQYLKMQGPYRGV 553



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 228/476 (47%), Gaps = 25/476 (5%)

Query: 74  NVSHNKLSELPAAIGELHMLKS-----LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           N+ +NK       + E H  K      LD+S   I  IP  I   T L +     N+L  
Sbjct: 50  NMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTC 109

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ +G+ +NL     S N +TSLP+ LA    +  LD+  NKLT + + +I     L  
Sbjct: 110 LPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPS-VIYKIGSLET 168

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N +  + E IG+LS+L  LD+ +N+I  +PS+I    SL    +  N L+ +P E
Sbjct: 169 LWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEE 228

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G    L  LDL  N L E      +L  L  + +  N +  +P E+     L + ++  
Sbjct: 229 IGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVES 288

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENE-DSEASTTKEDLITMATRLSVTSKELSLEG 366
           N L+ L  +L+      L K     L  NE  +  +   +  ++  T        +++E 
Sbjct: 289 NHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGPQQFVSTVT--------INMEH 336

Query: 367 MNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
             +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ I   
Sbjct: 337 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDI-EK 395

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L +L  L L NN L+++P+       + ++      + ++P    F  L HL +L+++  
Sbjct: 396 LVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGF--LQHLTKLWVQSN 453

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 454 KILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 509



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 218/451 (48%), Gaps = 55/451 (12%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+P+ I ++  L++L + +N 
Sbjct: 116 QLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNR 175

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I+ + ++IG+ + L   D   N+++ELPS++G+  +L     S N +T +PE++ DC  +
Sbjct: 176 IVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSL 235

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD++ N L+ L                        P +IG L  L+R+ +  N+I  I
Sbjct: 236 TQLDLQHNDLSEL------------------------PYSIGKLVNLVRIGIRYNKIRCI 271

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLS--V 279
           PS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q  +S   
Sbjct: 272 PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT 331

Query: 280 LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NE 337
           +++ +N +S +P  I  K T L KL L  N L +L   + +  +   L    ++L    E
Sbjct: 332 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 391

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLS-------------AIPSEIWEAGEITK 384
           D E     E L+    +L    K+L  +  NL+              +P+EI     +TK
Sbjct: 392 DIEKLVNLEILVLSNNQL----KKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTK 447

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L +  N I  LP  + +  SLQ L L  N +   P+ I   L SL  L L++N       
Sbjct: 448 LWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEI-GHLDSLKSLYLNDN------- 499

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
               ++P    L  S  I S+ EN P S +P
Sbjct: 500 SSLHNLPFELALCQSLEIMSI-ENSPLSQIP 529



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 51/231 (22%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 75  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 134

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 135 DS-LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQ--IGNLSKLK 190

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL-- 536
            L +R  ++RE P+ I +L  L +  +S N L  +PE   +  SLT+LDL  N++S L  
Sbjct: 191 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPY 250

Query: 537 --------------------------------------------PPELVSV 543
                                                       PP L+++
Sbjct: 251 SIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 301


>gi|71981152|ref|NP_001021259.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
 gi|74966395|sp|Q22875.3|SHOC2_CAEEL RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
 gi|3252977|gb|AAC39129.1| Ras-binding protein SUR-8 [Caenorhabditis elegans]
 gi|3293318|gb|AAC25697.1| leucine-rich repeat protein SOC-2 [Caenorhabditis elegans]
 gi|351065205|emb|CCD61151.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
          Length = 559

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 211/439 (48%), Gaps = 39/439 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK     G  +  W         L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPSVIYK----IGSLETLW---------LRYNRIVAVDEQIGNLSKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ +NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++T+   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWVQSNKILTLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL+ + +  + +   P  I  
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITA 535

Query: 425 SLSSLSCLKLD-NNPLRQV 442
              SL    L    P R V
Sbjct: 536 GGPSLVIQYLKMQGPYRGV 554



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 220/451 (48%), Gaps = 20/451 (4%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S   I  IP  I   T L +     N+L  LP+ +G+ +NL     S N +TSLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + LA    +  LD+  NKLT + + +I     L  L    N +  + E IG+LS+L  LD
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPS-VIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLD 194

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           + +N+I  +PS+I    SL    +  N L+ +P E+G    L  LDL  N L E      
Sbjct: 195 VRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIG 254

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L  L  + +  N +  +P E+     L + ++  N L+ L  +L+      L K     
Sbjct: 255 KLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVN 310

Query: 333 LPENE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
           L  NE  +  +   +  ++  T        +++E   +S IP  I+ +A  +TKL+L  N
Sbjct: 311 LSRNELTAFPAGGPQQFVSTVT--------INMEHNQISKIPIGIFSKATRLTKLNLKEN 362

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ S  S+  L LS N++K  P+ I   L +L  L L NN L+++P+      
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI-EKLVNLEILVLSNNQLKKLPNQIGNLN 421

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            + ++      + ++P    F  L HL +L+++  ++   P  I  L  L+ L L +N+L
Sbjct: 422 KLRELDLEENELETVPTEIGF--LQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNL 479

Query: 511 QSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 480 TAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 510



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 218/451 (48%), Gaps = 55/451 (12%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+P+ I ++  L++L + +N 
Sbjct: 117 QLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNR 176

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I+ + ++IG+ + L   D   N+++ELPS++G+  +L     S N +T +PE++ DC  +
Sbjct: 177 IVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSL 236

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD++ N L+ L                        P +IG L  L+R+ +  N+I  I
Sbjct: 237 TQLDLQHNDLSEL------------------------PYSIGKLVNLVRIGIRYNKIRCI 272

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLS--V 279
           PS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q  +S   
Sbjct: 273 PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT 332

Query: 280 LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NE 337
           +++ +N +S +P  I  K T L KL L  N L +L   + +  +   L    ++L    E
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLS-------------AIPSEIWEAGEITK 384
           D E     E L+    +L    K+L  +  NL+              +P+EI     +TK
Sbjct: 393 DIEKLVNLEILVLSNNQL----KKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTK 448

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L +  N I  LP  + +  SLQ L L  N +   P+ I   L SL  L L++N       
Sbjct: 449 LWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEI-GHLDSLKSLYLNDN------- 500

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
               ++P    L  S  I S+ EN P S +P
Sbjct: 501 SSLHNLPFELALCQSLEIMSI-ENSPLSQIP 530



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 51/231 (22%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQ--IGNLSKLK 191

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL-- 536
            L +R  ++RE P+ I +L  L +  +S N L  +PE   +  SLT+LDL  N++S L  
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPY 251

Query: 537 --------------------------------------------PPELVSV 543
                                                       PP L+++
Sbjct: 252 SIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 302


>gi|161078264|ref|NP_001097774.1| flyers-cup, isoform E [Drosophila melanogaster]
 gi|158030248|gb|ABW08664.1| flyers-cup, isoform E [Drosophila melanogaster]
          Length = 620

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 235/556 (42%), Gaps = 107/556 (19%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL----------------------- 73
           E D WW  V L  L L+ N +  +   + NL  LTVL                       
Sbjct: 75  EEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           NVSHNKLS+LP A+  L  L+ L++S+N  +++  +I     L   D   N ++ LP  +
Sbjct: 135 NVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N I  LP DL +   + K+D+  N LT L                  
Sbjct: 195 GFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSL------------------ 236

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKL 252
                 PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    L
Sbjct: 237 ------PEDMGLLRKLDCLYLQHNDILELP-EFEGNEALNELHASNNFIKIIPKAMCSNL 289

Query: 253 SKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL  N++ E   E      L+ LD+SNN++S LP  +  +  L  L + GNP++
Sbjct: 290 PHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIK 349

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------- 358
           T+R  ++   T  +LK L  R       E      D  + +  +SVT             
Sbjct: 350 TIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIP 407

Query: 359 -----------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCAS 404
                      ++ L++    L+++P ++++      +  +D +RN +  LP  L     
Sbjct: 408 GNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKD 467

Query: 405 LQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           L T L+LS N I   P  I +  + +S L L NN L  +P++                  
Sbjct: 468 LVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE------------------ 508

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTS 522
                  F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  
Sbjct: 509 -------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRR 561

Query: 523 LTELDLSDNNISALPP 538
           L+ LDL +N+I  +PP
Sbjct: 562 LSTLDLRNNDIETVPP 577



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 292 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 351

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 352 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 411

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 412 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 471

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 472 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 531

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 532 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 591

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 592 GNPFRQPRHQILMKGTDAIMSYLRDRIP 619



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 193/483 (39%), Gaps = 104/483 (21%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++HN + +L   + +LP L  LN+S+N+  EL   I +LHML+ LD   N+I  +
Sbjct: 131 LVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSL 190

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA-----DCSK 161
           P  IG    L       N +KELP  L    +L      +N +TSLPED+      DC  
Sbjct: 191 PGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLY 250

Query: 162 MSKLDV------EGNK-LTVL--SNNLIASW------------------TMLTELI---- 190
           +   D+      EGN+ L  L  SNN I                       +TEL     
Sbjct: 251 LQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELC 310

Query: 191 ---------ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC------------ 229
                     S N ++ +P T+ SL+ LI L +  N I +I   I  C            
Sbjct: 311 LLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 370

Query: 230 --------------------CSLAEFYMGNNALSALPAEL---GKLSKLGTLDLHSNQLK 266
                                S+     G      +P       KL    TL ++  +L 
Sbjct: 371 AVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELT 430

Query: 267 EYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTL-RKLLLTGNPLRTLRSSLVNGP 321
               +  Q+     + V+D + N LS LP  +  M  L  +L+L+ N         V G 
Sbjct: 431 SVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNN---------VIGY 481

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV--TSKELSLEGMNLSAIPSEIWEA 379
            P  +    +R+     S  + +   L  + T   V  T +EL++       IP+ ++E 
Sbjct: 482 VPQFISQF-TRI-----SFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYEL 535

Query: 380 GEITKLDLSRNSIQEL-PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             +  L  S N I+ L    L +   L TL L  N I+  P  IL +L++++ L+L  NP
Sbjct: 536 QGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVP-PILGNLTNITHLELVGNP 594

Query: 439 LRQ 441
            RQ
Sbjct: 595 FRQ 597



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 30/208 (14%)

Query: 339 SEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           SE  T  EDL   +         SK ++LE + +       W    +  LDLS N++  +
Sbjct: 40  SEPPTRAEDLPKRLYDINEADADSKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHI 98

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            P++ +  SL  L L  N + + P  I   L  L  L + +N L Q+P   +  +P L+ 
Sbjct: 99  SPKIENLQSLTVLTLHDNALVELPPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRH 156

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           L++SYN                        +  E   DI  L  L  LD   N++QS+P 
Sbjct: 157 LNISYN------------------------EFVELNPDISDLHMLEFLDGGHNNIQSLPG 192

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
           G   L  LT L L  N+I  LPP+LV++
Sbjct: 193 GIGFLVRLTALLLPYNHIKELPPDLVNM 220


>gi|348678832|gb|EGZ18649.1| hypothetical protein PHYSODRAFT_360673 [Phytophthora sojae]
          Length = 1247

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 233/526 (44%), Gaps = 92/526 (17%)

Query: 39  DKW------WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           D W      W    L+KL+L+HN + ++   +++L  L  L+VSHN+L+ LP+ +     
Sbjct: 287 DAWKLSSRIWNLQFLKKLVLSHNCLTRIPSGIQDLIHLEELDVSHNQLTRLPSCLQTTTT 346

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS----------------SLGRC 136
           L  +  S N I     ++     +   D S N+LKELP                  +G  
Sbjct: 347 LTEIRASHNFIQAFSPKLWKLREIRYLDLSHNRLKELPYVEGDLKLLRETREWQVGVGLL 406

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L     ++N +  +P+ +  CS+++ LD+  N+LT L +  I +   L  L+   N L
Sbjct: 407 ARLEVLLLNDNRLVEVPKSIEKCSELTLLDLSNNQLTALRDE-IPALASLKRLVLHHNAL 465

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG+LS L   DL  NR+L++P SI     L    + +N L  LP E G LS+L 
Sbjct: 466 RSLPEAIGNLSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKEFGALSQLR 525

Query: 257 TLDLHSN----QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL-LLTGNPLR 311
            L+L +N     LK++        LS +   + S  G+        T   L  L  +P+R
Sbjct: 526 HLNLDNNPKLINLKDFFGH-----LSSVSFFSASSCGI-------VTFESLDFLKDSPVR 573

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TLR         ALL++                   L+     +  T +EL L G +LS 
Sbjct: 574 TLRLR-----QNALLEF------------------PLLIGHAAMQDTLQELVLAGNHLSQ 610

Query: 372 IP-SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           +P + +     +  LDLS NS++ LP E++    L+ L LS N++++ PD  LT L  L 
Sbjct: 611 VPLAVLLYCSHLQHLDLSNNSLRVLPTEIAHLRRLKVLYLSTNELQELPDE-LTQLPRLR 669

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 490
            L  D+N L ++P     ++  L  L++S+N                        QLR  
Sbjct: 670 ELTCDHNQLEKLPLR-VGNLSQLIKLNVSFN------------------------QLRSL 704

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           PT ++ L  L+ L  S N L  +P     +    E   S+N  +AL
Sbjct: 705 PTSVMELTHLQSLYASDNLLSGLPPAISRVNCFCE--FSNNPFTAL 748



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 217/482 (45%), Gaps = 57/482 (11%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +L + I  L  LK L +S N + +IP  I     L + D S NQL  LPS L     L++
Sbjct: 290 KLSSRIWNLQFLKKLVLSHNCLTRIPSGIQDLIHLEELDVSHNQLTRLPSCLQTTTTLTE 349

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--------NLIASWTM-------L 186
            +AS+N I +    L    ++  LD+  N+L  L               W +       L
Sbjct: 350 IRASHNFIQAFSPKLWKLREIRYLDLSHNRLKELPYVEGDLKLLRETREWQVGVGLLARL 409

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L+ + N L  +P++I   S L  LDL  N++ ++   I    SL    + +NAL +LP
Sbjct: 410 EVLLLNDNRLVEVPKSIEKCSELTLLDLSNNQLTALRDEIPALASLKRLVLHHNALRSLP 469

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +G LS L   DL  N+L         L +L +L L +N L  LP E G ++ LR L L
Sbjct: 470 EAIGNLSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKEFGALSQLRHLNL 529

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             NP       L+N      LK     L       AS+    ++T            SL+
Sbjct: 530 DNNP------KLIN------LKDFFGHLSSVSFFSASSC--GIVTFE----------SLD 565

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAI 422
            +  S + +          L L +N++ E P  +   A   +LQ L+L+ N +   P A+
Sbjct: 566 FLKDSPVRT----------LRLRQNALLEFPLLIGHAAMQDTLQELVLAGNHLSQVPLAV 615

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
           L   S L  L L NN LR +P++    +  L++L LS N +  LP+    + LP L+EL 
Sbjct: 616 LLYCSHLQHLDLSNNSLRVLPTE-IAHLRRLKVLYLSTNELQELPDE--LTQLPRLRELT 672

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
               QL + P  +  L QL  L++S N L+S+P     LT L  L  SDN +S LPP + 
Sbjct: 673 CDHNQLEKLPLRVGNLSQLIKLNVSFNQLRSLPTSVMELTHLQSLYASDNLLSGLPPAIS 732

Query: 542 SV 543
            V
Sbjct: 733 RV 734



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 15/139 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN SLR +P E+                  L+ L L+ N +++L ++L  LP L  L
Sbjct: 625 LDLSNNSLRVLPTEIA-------------HLRRLKVLYLSTNELQELPDELTQLPRLREL 671

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
              HN+L +LP  +G L  L  L+VSFN +  +P  +   T L     S N L  LP ++
Sbjct: 672 TCDHNQLEKLPLRVGNLSQLIKLNVSFNQLRSLPTSVMELTHLQSLYASDNLLSGLPPAI 731

Query: 134 GRCLNLSDFKASNNCITSL 152
            R     +F  SNN  T+L
Sbjct: 732 SRVNCFCEF--SNNPFTAL 748


>gi|156373929|ref|XP_001629562.1| predicted protein [Nematostella vectensis]
 gi|261277881|sp|A7SFP1.1|SHOC2_NEMVE RecName: Full=Leucine-rich repeat protein soc-2 homolog
 gi|156216565|gb|EDO37499.1| predicted protein [Nematostella vectensis]
          Length = 577

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 209/447 (46%), Gaps = 48/447 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  ++++P+ +YK         ++             N I  ++  + NL LL  L
Sbjct: 160 LDLRHNKIKEIPDVIYKLTTLTTLYLRF-------------NRISVVESGIGNLKLLERL 206

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LP  IG+L  L +LD+S N I  +P EIG+   +   D   N +  LP S+
Sbjct: 207 SLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSI 266

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   ++      N ++SLP+ LA+CS + + ++EGN +  L   L++S   LT L  S+
Sbjct: 267 GRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSR 326

Query: 194 NLLN----GMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           N       G P+    ++  I   +  NR+  IP  + +    L++  + +N L++LP +
Sbjct: 327 NKFEVFPAGPPKQFCQVNTFI---MEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLD 383

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            G    L  L++ +NQ+ +   E  Q  + L VL LSNN L  LP  IG +  LR L + 
Sbjct: 384 FGSWISLVELNVATNQISKLP-EDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIE 442

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKE-DLITMATRLSVTSKELS 363
            N L ++         P  ++YLRS  RL    +   S  +    ++  T LSV   E  
Sbjct: 443 ENKLESI---------PTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENE-- 491

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
                L ++P EI     + +L L+ N ++Q LP EL  C SLQ + +    +   P  I
Sbjct: 492 -----LVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQI 546

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           +    SL    L      Q P +G  D
Sbjct: 547 VAGGPSLVIQYLR----LQGPYNGMVD 569



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 225/494 (45%), Gaps = 52/494 (10%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           H  I+K +E+       T L++S   ++ LP  + EL  L+ L +  N I  +P E+G  
Sbjct: 77  HKEIQKCREEGA-----TRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S N L  LP +L +   L      +N I  +P+ +   + ++ L +  N+++
Sbjct: 132 PNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRIS 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           V+ +  I +  +L  L   +N +  +P  IG L  L+ LD+  N I ++P+ I  C  + 
Sbjct: 192 VVESG-IGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMT 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLP 291
              + +N + +LP  +G+L+ +  L L  NQL      +  C   +   ++  N+++ LP
Sbjct: 251 SLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCS-GIDEFNIEGNNIAELP 309

Query: 292 PE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
            + +  +  L  L L+ N      +                  P  +  + +T       
Sbjct: 310 EKLLSSLKNLTSLTLSRNKFEVFPAG-----------------PPKQFCQVNT------- 345

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                        +E   +  IP  ++ +A  ++KL++  N +  LP +  S  SL  L 
Sbjct: 346 -----------FIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVELN 394

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           ++ N+I   P+ I   L +L  L L NN L+++P  G   +  L++LD+  N + S+P  
Sbjct: 395 VATNQISKLPEDI-QWLVNLEVLILSNNLLKKLPR-GIGALRKLRVLDIEENKLESIPTE 452

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
             +  L  L+ L L+   L   P  I  L  +  L + +N L S+P+   N+ SL +L L
Sbjct: 453 IEY--LRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYL 510

Query: 529 SDN-NISALPPELV 541
           +DN N+ +LP ELV
Sbjct: 511 NDNENLQSLPYELV 524


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 170/369 (46%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 205

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 206 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 265

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 266 NKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT--------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P EI +   
Sbjct: 317 -----------LPEN------------IGQLQRLQT----LYLGNNQLNFLPKEIGQLQN 349

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 350 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 406

Query: 442 VPSDGFKDI 450
            PS+  + I
Sbjct: 407 -PSEKIERI 414



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 182/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 40  NITEALKNPQNIRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 98

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+G+L  L  L+L  NQL     
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 209

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 210 RN---------------------------LESLGLDHNQLNVLPKEIGQLQNLQILHLRN 242

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 243 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 300

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P +I +LQ L  LDL  N
Sbjct: 301 LQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHN 358

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 359 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 12/328 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           KL L  NPL + + + +    P  + Y 
Sbjct: 398 KLYLHNNPLPSEKIARIRKLLPQCIIYF 425



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 169/369 (45%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 205

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 206 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 265

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 266 NKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT--------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P EI +   
Sbjct: 317 -----------LPEN------------IGQLQRLQT----LYLGNNQLNFLPKEIGQLRN 349

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 350 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 406

Query: 442 VPSDGFKDI 450
            PS+    I
Sbjct: 407 -PSEKIARI 414



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 191/409 (46%), Gaps = 49/409 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 KEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P +    +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNFLPKE-IGQLRNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N    LP E ++
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIA 412


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 159/345 (46%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL  LP  IG+L  L+ LD+S N ++ +P EI     L +   + NQ K  P 
Sbjct: 31  VLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPK 90

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L     SNN +T LP ++     + +L++  N+L  +S   I     L +L  
Sbjct: 91  EIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKE-IEQLKNLQKLYL 149

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L   P+ IG L  L  L L  N++ + P  I    +L E Y+ NN L+  P E+GK
Sbjct: 150 DNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGK 209

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  +L +L  L+L  N L+ +P EIG++  L+ L L+ N  
Sbjct: 210 LQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQF 269

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+         P     L++                            K LSL+   L+
Sbjct: 270 KTI---------PVEFGQLKNL---------------------------KMLSLDANQLT 293

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           A+P EI +   +  L+L  N +  +P E+    +LQTL L  N+ 
Sbjct: 294 ALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASW-------TM 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLITI 318



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 149/346 (43%), Gaps = 39/346 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   D S NQL  LP  + +  NL +   + N   + 
Sbjct: 29  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 88

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 89  PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 124

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L  L L +NQL  +  E 
Sbjct: 125 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEI 184

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 235

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
               N D    TT    I     L V    L L       IP E  +   +  L L  N 
Sbjct: 236 LQELNLDVNQLTTIPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQ 291

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +  LP E+    +L+ L L  N++   P  I   L +L  L L NN
Sbjct: 292 LTALPKEIGKLKNLKMLNLDANQLITIPKEI-GQLQNLQTLYLRNN 336



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 147/352 (41%), Gaps = 84/352 (23%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N     P E
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 92  IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+T+   +                            E L  +        ++L L+   
Sbjct: 130 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 153

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A P EI +   + +L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 154 LTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 212

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 213 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 247

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 299



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N ++ + +++  L  L  L + +N+L+  P  IG+L  L+ L +S N +  
Sbjct: 120 NLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTT 179

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L +   S+NQL   P  +G+   L      +N +T++P ++    K+ +L
Sbjct: 180 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT +    I     L  L  S N    +P   G L  L  L L  N++ ++P  
Sbjct: 240 NLDVNQLTTIPKE-IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L    +  N L  +P E+G+L  L TL L +NQ 
Sbjct: 299 IGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 196 SNNQLTTFPKEI 207



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L  N +  +  ++  L  L  
Sbjct: 192 ELYLSNNQLTTFPKEI-------GKLQK------LQWLGLGDNQLTTIPNEIGKLQKLQE 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 239 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N + ++P+++     +  L +  N+ ++
Sbjct: 299 IGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSI 340


>gi|260788668|ref|XP_002589371.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
 gi|229274548|gb|EEN45382.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
          Length = 310

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 24/304 (7%)

Query: 38  GDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           G      VD L  L L++  +  + E++ ++  L  +NVSHNKL+ +P AIG L  L  L
Sbjct: 4   GLNLQRTVDGLLYLNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRL 63

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           D   N +  +P  IG+   L       N+L +LP+ +   LNL    A NN +++ P  +
Sbjct: 64  DAGGNKLTSLPQAIGTLPKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGV 123

Query: 157 ADCSKMSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKN 194
               K+ +L V  N+LT +   +                      +   T L +L  S N
Sbjct: 124 EKLQKLRELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDN 183

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L +L RLD H N + S+P  I     L   Y+ +N L+ LP  + KL K
Sbjct: 184 KLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQK 243

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L +  NQL E     C L  L VL + NN LS  PP + K+  LR+L + GN L  +
Sbjct: 244 LRQLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEV 303

Query: 314 RSSL 317
            S +
Sbjct: 304 PSGV 307



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 25/307 (8%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE +  ++ L  +++  N++ SIP +I     L+    G N L++LP  +G L KL
Sbjct: 24  LTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQAIGTLPKL 83

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L ++ N+L +     C L  L VL   NN+LS  PP + K+  LR+L +  N L  + 
Sbjct: 84  THLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGVEKLQKLRELYVYDNQLTEVP 143

Query: 315 SSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
             + + P   +L   R+   RLP++            +T  TRL    K+L++    L++
Sbjct: 144 PGVCSLPNLEVLSVGRNPIRRLPDD------------VTRLTRL----KDLNVSDNKLTS 187

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           IP  I    ++ +LD   N +  LP E+ S   L  L +  NK+ + P  I   L  L  
Sbjct: 188 IPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGI-EKLQKLRQ 246

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L +  N L +VPS G   +P L++L +  N +++ P  P    L  L+ELY+   QL E 
Sbjct: 247 LYICGNQLTEVPS-GVCSLPNLEVLHVGNNKLSTFP--PGVEKLQKLRELYIYGNQLTEV 303

Query: 491 PTDILRL 497
           P+ +  L
Sbjct: 304 PSGVCSL 310



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 144/345 (41%), Gaps = 50/345 (14%)

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           ++  L+ L+L    + SIP  +     L    + +N L+++P  +G+L KL         
Sbjct: 10  TVDGLLYLNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKL--------- 60

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                        S LD   N L+ LP  IG +  L  L +  N L  L + +       
Sbjct: 61  -------------SRLDAGGNKLTSLPQAIGTLPKLTHLYVYDNKLTKLPTGV------C 101

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEI 382
           LL  L            S    +L T    +    K  EL +    L+ +P  +     +
Sbjct: 102 LLLNLEV---------LSAFNNNLSTFPPGVEKLQKLRELYVYDNQLTEVPPGVCSLPNL 152

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L + RN I+ LP +++    L+ L +S NK+   P+AI   L  L  L    N L  +
Sbjct: 153 EVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAI-GRLQKLYRLDAHGNMLTSL 211

Query: 443 PSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           P    ++I  LQ L   Y     +A+LP  P    L  L++LY+   QL E P+ +  L 
Sbjct: 212 P----QEIGSLQKLTHLYVHSNKLANLP--PGIEKLQKLRQLYICGNQLTEVPSGVCSLP 265

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L +L +  N L + P G + L  L EL +  N ++ +P  + S+
Sbjct: 266 NLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 310



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 27/187 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L +  N I +L +D+  L  L  LNVS NKL+ +P AIG L  L  LD   N +  
Sbjct: 151 NLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKLYRLDAHGNMLTS 210

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIGS   L      SN+L  LP  + +   L       N +T +P  +     +  L
Sbjct: 211 LPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTEVPSGVCSLPNLEVL 270

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  NKL+                          P  +  L +L  L ++ N++  +P  
Sbjct: 271 HVGNNKLST------------------------FPPGVEKLQKLRELYIYGNQLTEVP-- 304

Query: 226 ISGCCSL 232
            SG CSL
Sbjct: 305 -SGVCSL 310


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 211/443 (47%), Gaps = 39/443 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK                L+ L L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPSVIYK-------------INSLETLWLRYNRIVAVDEQIGNLVKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       +IT+   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWIQSNKIITLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL+ + +  + +   P  I  
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITA 535

Query: 425 SLSSLSCLKLD-NNPLRQVPSDG 446
              SL    L    P R V   G
Sbjct: 536 GGPSLVIQYLKMQGPYRGVVMTG 558



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 217/447 (48%), Gaps = 47/447 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+P+ I +++ L++L + +N 
Sbjct: 117 QLVNLKKLGLSENALSSLPDSLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNR 176

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I+ + ++IG+   L   D   N+++ELPS++G+  +L     S N +T +PE++ +C  +
Sbjct: 177 IVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSL 236

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD++ N L+ L                        P +IG L+ L+R+ +  N+I  I
Sbjct: 237 TQLDLQHNDLSEL------------------------PYSIGKLTNLVRIGIRYNKIRCI 272

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLS--V 279
           PS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q  +S   
Sbjct: 273 PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT 332

Query: 280 LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NE 337
           +++ +N +S +P  I  K T L KL L  N L +L   + +  +   L    ++L    E
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 338 DSEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLS 388
           D E     E L+    +L     ++          LE   L  +P+EI     +TKL + 
Sbjct: 393 DIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWIQ 452

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N I  LP  + +  SLQ L L  N +   P+ I   L SL  L L++N           
Sbjct: 453 SNKIITLPRSIGNLCSLQDLRLGENNLTAIPEEI-GHLDSLKSLYLNDN-------SSLH 504

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLP 475
           ++P    L  S  I S+ EN P S +P
Sbjct: 505 NLPFELALCQSLEIMSI-ENSPLSQIP 530



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 220/451 (48%), Gaps = 20/451 (4%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S   I  IP  I   T L +     N+L  LP+ +G+ +NL     S N ++SLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLP 135

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + LA    +  LD+  NKLT + + +I     L  L    N +  + E IG+L +L  LD
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPS-VIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLD 194

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           + +N+I  +PS+I    SL    +  N L+ +P E+G+   L  LDL  N L E      
Sbjct: 195 VRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYSIG 254

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L  L  + +  N +  +P E+     L + ++  N L+ L  +L+      L K     
Sbjct: 255 KLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLT----MLPKIHTVN 310

Query: 333 LPENE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRN 390
           L  NE  +  +   +  ++  T        +++E   +S IP  I+ +A  +TKL+L  N
Sbjct: 311 LSRNELTAFPAGGPQQFVSTVT--------INMEHNQISKIPIGIFSKATRLTKLNLKEN 362

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP ++ S  S+  L LS N++K  P+ I   L +L  L L NN L+++P+      
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI-EKLVNLEILVLSNNQLKKLPNQIGNLK 421

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            + ++      + ++P    F  L HL +L+++  ++   P  I  L  L+ L L +N+L
Sbjct: 422 KLRELDLEENELETVPTEIGF--LQHLTKLWIQSNKIITLPRSIGNLCSLQDLRLGENNL 479

Query: 511 QSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 480 TAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 510



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 51/231 (22%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLP 135

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPSVIYK-INSLETLWLRYNRIVAVDEQ--IGNLVKLK 191

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL-- 536
            L +R  ++RE P+ I +L  L +  +S N L  +PE      SLT+LDL  N++S L  
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPY 251

Query: 537 --------------------------------------------PPELVSV 543
                                                       PP L+++
Sbjct: 252 SIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 302


>gi|323449088|gb|EGB04979.1| hypothetical protein AURANDRAFT_54961 [Aureococcus anophagefferens]
          Length = 942

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 205/436 (47%), Gaps = 24/436 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N + +L++D   L  L VL+VS N+L   P  + +L  L+ L  S N I   
Sbjct: 47  LTELDVSDNRLSRLQKDFGGLFNLEVLDVSGNRLRTFPRELQDLDKLRVLRASKNRIAWF 106

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +    AL + D   N L ELP  +G    L + +   N +   P  L     +  LD
Sbjct: 107 PAHLWQLGALEELDLCENVLVELPMEVGNLALLQETRLRGNKLAKWPNQLDSLKNLETLD 166

Query: 167 VEGNKLTVLSNNLIA-SWTMLTELIASKNLLNGMPE----TIGSLSRLIRLDLHQNRILS 221
           +  N L  ++   +A S    T  +    +  G P+        L+ L RLD+  NRI +
Sbjct: 167 LSKNDLAHMAPVRVAQSEEQKTAAVKPGEVAIGAPDPKQCDWAGLASLTRLDISGNRIAA 226

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
            P+ ++   +L E    +NA+ ALP  L  L  L    L  N+L++       LR L +L
Sbjct: 227 FPADLAKMTALTELDARDNAVKALPKNLAGLRGLVAFPLDGNRLEKLDDALKGLRALKLL 286

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
               N L  L  EI ++  ++++ L GN L +L   +    +   L + ++RL E     
Sbjct: 287 SAPRNGLRSLTAEIAQLRFVKQVDLDGNELASLPKEITQLRSCERLTFAKNRLAELPKGF 346

Query: 341 AS----------TTKEDLIT---MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            S          + K D I    +A+ +S+T  EL      ++A P ++   G++T+LDL
Sbjct: 347 GSMFRLQALVLRSNKFDKIDGDLLASLVSLT--ELDFSDNAVAAFPKKLCRLGKLTRLDL 404

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIK--DWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           SRN +  +P E+ S   L+   L  N++K  D   A + +L +L  L L +N L ++P +
Sbjct: 405 SRNKLWFVPKEIRSLGELKFFHLHENRLKTADMSRAEVATLKALEVLTLHDNYLEELPPE 464

Query: 446 GFKDIPMLQILDLSYN 461
            F D+P L+ L LS+N
Sbjct: 465 -FADLPRLRKLTLSHN 479



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 185/452 (40%), Gaps = 54/452 (11%)

Query: 129 LPSSLGRCLN---LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           LP    R L+   L++   S+N ++ L +D      +  LDV GN+L      L      
Sbjct: 34  LPRVTFRALSIETLTELDVSDNRLSRLQKDFGGLFNLEVLDVSGNRLRTFPREL-QDLDK 92

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L ASKN +   P  +  L  L  LDL +N ++ +P  +     L E  +  N L+  
Sbjct: 93  LRVLRASKNRIAWFPAHLWQLGALEELDLCENVLVELPMEVGNLALLQETRLRGNKLAKW 152

Query: 246 PAELGKLSKLGTLDLHSNQLK------------------------------EYCVEACQL 275
           P +L  L  L TLDL  N L                               + C  A   
Sbjct: 153 PNQLDSLKNLETLDLSKNDLAHMAPVRVAQSEEQKTAAVKPGEVAIGAPDPKQCDWAGLA 212

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ LD+S N ++  P ++ KMT L +L    N ++ L         P  L  LR  +  
Sbjct: 213 SLTRLDISGNRIAAFPADLAKMTALTELDARDNAVKAL---------PKNLAGLRGLVAF 263

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             D       +D +     L +    LS     L ++ +EI +   + ++DL  N +  L
Sbjct: 264 PLDGNRLEKLDDALKGLRALKL----LSAPRNGLRSLTAEIAQLRFVKQVDLDGNELASL 319

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E++   S + L  ++N++ + P     S+  L  L L +N   ++  D    +  L  
Sbjct: 320 PKEITQLRSCERLTFAKNRLAELPKGF-GSMFRLQALVLRSNKFDKIDGDLLASLVSLTE 378

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LD S N +A+ P+      L  L  L L R +L   P +I  L +L+   L +N L++  
Sbjct: 379 LDFSDNAVAAFPKK--LCRLGKLTRLDLSRNKLWFVPKEIRSLGELKFFHLHENRLKTAD 436

Query: 515 EGFKNLTSLTELD---LSDNNISALPPELVSV 543
                + +L  L+   L DN +  LPPE   +
Sbjct: 437 MSRAEVATLKALEVLTLHDNYLEELPPEFADL 468



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 172/407 (42%), Gaps = 73/407 (17%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L++L L  N + +L  ++ NL LL    +  NKL++ P  +  L  L++LD+S N
Sbjct: 111 WQLGALEELDLCENVLVELPMEVGNLALLQETRLRGNKLAKWPNQLDSLKNLETLDLSKN 170

Query: 102 SIMKI-----------------PDEIGSA------------TALVKFDCSSNQLKELPSS 132
            +  +                 P E+                +L + D S N++   P+ 
Sbjct: 171 DLAHMAPVRVAQSEEQKTAAVKPGEVAIGAPDPKQCDWAGLASLTRLDISGNRIAAFPAD 230

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L +   L++  A +N + +LP++LA    +    ++GN+L  L + L      L  L A 
Sbjct: 231 LAKMTALTELDARDNAVKALPKNLAGLRGLVAFPLDGNRLEKLDDAL-KGLRALKLLSAP 289

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +   I  L  + ++DL  N + S+P  I+   S        N L+ LP   G +
Sbjct: 290 RNGLRSLTAEIAQLRFVKQVDLDGNELASLPKEITQLRSCERLTFAKNRLAELPKGFGSM 349

Query: 253 SKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  L L SN+  +   +  A  + L+ LD S+N+++  P ++ ++  L +L L+ N L
Sbjct: 350 FRLQALVLRSNKFDKIDGDLLASLVSLTELDFSDNAVAAFPKKLCRLGKLTRLDLSRNKL 409

Query: 311 ----RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
               + +RS          LK+    L EN    A  ++ ++ T+               
Sbjct: 410 WFVPKEIRSL-------GELKFF--HLHENRLKTADMSRAEVATLKA------------- 447

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                          +  L L  N ++ELPPE +    L+ L LS N
Sbjct: 448 ---------------LEVLTLHDNYLEELPPEFADLPRLRKLTLSHN 479


>gi|148679902|gb|EDL11849.1| leucine rich repeat containing 40, isoform CRA_b [Mus musculus]
          Length = 479

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 229/488 (46%), Gaps = 70/488 (14%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LPLL ++   HNKL  LP  I  L  L++L +  N +  IP+     + L   D SSN+L
Sbjct: 7   LPLLFLI---HNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRL 63

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             +P+      +L     S+N + +LP +++   ++  LD + N                
Sbjct: 64  ATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDAN---------------- 107

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                   LL  +P  +GS+  L  L L +N++  +P     C  L E ++  N +  L 
Sbjct: 108 --------LLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLG 158

Query: 247 AE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +  L+ L 
Sbjct: 159 AEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLA 217

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------T 358
           L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V      T
Sbjct: 218 LEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIAT 277

Query: 359 SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNK 414
            K L       + IP ++++A +   IT ++ S+N + E+P  +     +   I LS NK
Sbjct: 278 LKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNK 337

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
                   L+ +S   CL                 +  L  LDL  N ++SLPE    SS
Sbjct: 338 --------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLPEE--MSS 370

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNN 532
           L  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  LDL +N+
Sbjct: 371 LTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNND 430

Query: 533 ISALPPEL 540
           +  +PPEL
Sbjct: 431 LLQIPPEL 438



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 144 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 203

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 204 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 263

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +     L     S+   T +P+DL D +K   ++ ++   N+L  +   ++ 
Sbjct: 264 LPSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVE 323

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 324 LKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 383

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
               P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G    
Sbjct: 384 FKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQ 443

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 444 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 478



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 169/400 (42%), Gaps = 60/400 (15%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +PE I SL  L  L L  N +  IP        L +  + +N L+ +PA+
Sbjct: 10  LFLIHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPAD 69

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              LS L  L+L SNQLK    E  ++ RL  LD   N L  +PP++G M +L  L L  
Sbjct: 70  FALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRR 129

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N LR L       P+   LK L   L EN+  +     E L  +   L      L L G 
Sbjct: 130 NKLRVLPE----FPSCRQLKEL--HLAENQIEKLGA--EHLQHLQAILV-----LDLRGN 176

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELP----------------------PELSSCASL 405
            L ++P E+     + +LDLS N I  LP                       E+ +  + 
Sbjct: 177 KLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQ 236

Query: 406 QTLILSRNKIKD--------WPDAILT-------SLSSLSCLKLDNNPLRQ---VPSDGF 447
           + L   R+KIKD         P+  +T       ++ +++ LKL +   +Q   +P D F
Sbjct: 237 EVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYSDKQATLIPDDLF 296

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELY----LRRMQLREAPTDILRLQQLRIL 503
                  I  ++++   L E P    +  L+E+     L   +L     ++  LQ+L  L
Sbjct: 297 DATKTTLITSINFSKNQLCEIP--QRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFL 354

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           DL  N L S+PE   +LT L  ++LS N     P  L  +
Sbjct: 355 DLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRI 394



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 170/394 (43%), Gaps = 63/394 (15%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  E +   
Sbjct: 107 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 165

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 166 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 224

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 225 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 284

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 285 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 344

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 345 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 394

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 395 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 428

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           N + ++PPEL +C  L+TL+L  N  +    AIL
Sbjct: 429 NDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAIL 462


>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 58/436 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQ  +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 541

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 542 KLSIMSIENCPLSHLP 557



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 221/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N+    P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQPTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRELRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 213/435 (48%), Gaps = 50/435 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L   L  G   ++++     L  N+ ++
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL--PLDFGTWTSMVEL---NLATNQPTK 416

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                  L+++          L L    L  +P  +    E+ +LDL  N ++ LP E++
Sbjct: 417 IPEDVSGLVSLEV--------LILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 461 NIASLPENPPFSSLP 475
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N   K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQPTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328


>gi|393905431|gb|EJD73969.1| leucine-rich repeat protein SHOC-2 [Loa loa]
          Length = 498

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 213/461 (46%), Gaps = 79/461 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+KL L+ N +  L + L  L  L  L++ HNKL ELP  I ++  L++L + +N I+
Sbjct: 61  VNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIV 120

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            I  EIG    L   D   N+++ELP ++G+  +L     S N + ++PE++  CS++++
Sbjct: 121 SIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQ 180

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +PE +G+L  LIRL +  N++  +PS
Sbjct: 181 LDLQHNDLV------------------------SLPEAMGNLQNLIRLGIRYNKLRHLPS 216

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY----------CVE-- 271
            ++ C  L EF + +N L ALP   L  L  L T++L  N+L  +          CV   
Sbjct: 217 GMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSIN 276

Query: 272 --------------ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---R 314
                         +    L+ L+L  N+L+ +P ++G    + +L L+ N LR L    
Sbjct: 277 MEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDV 336

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             LVN     L   +  +LP    S+  + K+             +EL LE   L AIP+
Sbjct: 337 DKLVNLEVLVLSNNMLKKLP----SQIGSLKK------------LRELDLEENELDAIPN 380

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI     +TKL +  N +  LP  + +  +L  L    N +   P+ I  +L SL  L +
Sbjct: 381 EIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEI-GNLDSLRSLYI 439

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++NP          ++P    L  S  I S+ EN P S +P
Sbjct: 440 NDNP-------SLHNLPFELALCASLEIMSI-ENCPLSQIP 472



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 193/420 (45%), Gaps = 45/420 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  +  ++  L  L ++++  NK+ ELP  IG++  L    +S+N
Sbjct: 104 YQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYN 163

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  IP+EIG  + L + D   N L  LP ++G   NL       N +  LP  +A C K
Sbjct: 164 HLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHK 223

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL----NGMPETIGSLSRLIRLDLHQN 217
           + +  VE N+L  L   ++AS   L  +  S+N L    +G P+   S    + +++  N
Sbjct: 224 LEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFAS---CVSINMEHN 280

Query: 218 RILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
            I  IP  I S    L +  +  NAL+++P ++G                      C L 
Sbjct: 281 AIAKIPFGIFSKATGLTKLNLKENALTSMPLDMG----------------------CWLA 318

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           ++ L+LS N L  LP ++ K+  L  L+L+ N L+ L S +        LK LR    E 
Sbjct: 319 MTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQI------GSLKKLRELDLEE 372

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            + +A   +   +T  T+L + S +       L  +P  I     +T L    N +  LP
Sbjct: 373 NELDAIPNEIGFVTSLTKLWIQSNK-------LVGLPRTIGNLTNLTDLRAGENCLTSLP 425

Query: 397 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            E+ +  SL++L ++ N  + + P   L   +SL  + ++N PL Q+P +     P L I
Sbjct: 426 EEIGNLDSLRSLYINDNPSLHNLPFE-LALCASLEIMSIENCPLSQIPPEITAGGPSLVI 484



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 84/419 (20%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I S+P  + D  ++++L +  NKL VL N  I +   L +L  S+N L  +P+T+ +L+R
Sbjct: 27  IVSIPSSIRDLVQLTELFLYKNKLAVLPNE-IGNLVNLKKLGLSENGLTSLPDTLAALTR 85

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N++  +P  I    SL   ++  N + ++ +E+G+L +L  +DL  N+++E 
Sbjct: 86  LETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRE- 144

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                                LPP IG++ +L   LL+ N LRT+               
Sbjct: 145 ---------------------LPPTIGQIKSLIVCLLSYNHLRTI--------------- 168

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                PE             I   + L+    +L L+  +L ++P  +     + +L + 
Sbjct: 169 -----PEE------------IGQCSELT----QLDLQHNDLVSLPEAMGNLQNLIRLGIR 207

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++ LP  ++ C  L+  I+  N+++  P+ +L SL +L  + L  N L   PS G +
Sbjct: 208 YNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQ 267

Query: 449 DIPMLQILDLSYN-IASLP----------------ENPPFSSLP-------HLQELYLRR 484
                  +++ +N IA +P                EN   +S+P        + EL L  
Sbjct: 268 QFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENA-LTSMPLDMGCWLAMTELNLST 326

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            QLR  P D+ +L  L +L LS N L+ +P    +L  L ELDL +N + A+P E+  V
Sbjct: 327 NQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIGFV 385



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 223/475 (46%), Gaps = 45/475 (9%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + +  +P++I +L  L  L +  N +  +P+EIG+                  
Sbjct: 18  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNL----------------- 60

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
                 +NL     S N +TSLP+ LA  +++  LD+  NKL  L   +I   + L  L 
Sbjct: 61  ------VNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELP-PVIYQISSLETLW 113

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N +  +   IG L RL  +DL +N+I  +P +I    SL    +  N L  +P E+G
Sbjct: 114 LRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIG 173

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           + S+L  LDL  N L         L+ L  L +  N L  LP  +     L + ++  N 
Sbjct: 174 QCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQ 233

Query: 310 LRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           L  L   ++     A L  L++  L  NE +   +        A+ +S+     ++E   
Sbjct: 234 LEALPEGML-----ASLPNLKTINLSRNELTVFPSGGPQ--QFASCVSI-----NMEHNA 281

Query: 369 LSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           ++ IP  I+ +A  +TKL+L  N++  +P ++    ++  L LS N+++  PD +   L 
Sbjct: 282 IAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDV-DKLV 340

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           +L  L L NN L+++PS     +  L+ LDL  N + ++P    F +   L +L+++  +
Sbjct: 341 NLEVLVLSNNMLKKLPSQ-IGSLKKLRELDLEENELDAIPNEIGFVT--SLTKLWIQSNK 397

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           L   P  I  L  L  L   +N L S+PE   NL SL  L ++DN ++  LP EL
Sbjct: 398 LVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYINDNPSLHNLPFEL 452



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 42/347 (12%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LS   LR +P E+              +  +L +L L HN++  L E + NL  L  L +
Sbjct: 160 LSYNHLRTIPEEI-------------GQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGI 206

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSS-- 132
            +NKL  LP+ +   H L+   V  N +  +P+  + S   L   + S N+L   PS   
Sbjct: 207 RYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGP 266

Query: 133 -----------------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                                    +   L+      N +TS+P D+     M++L++  
Sbjct: 267 QQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLST 326

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L VL ++ +     L  L+ S N+L  +P  IGSL +L  LDL +N + +IP+ I   
Sbjct: 327 NQLRVLPDD-VDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIGFV 385

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN-SL 287
            SL + ++ +N L  LP  +G L+ L  L    N L     E   L  L  L +++N SL
Sbjct: 386 TSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYINDNPSL 445

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LP E+    +L  + +   PL  +   +  G    +++YL+ + P
Sbjct: 446 HNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 492



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E T+LDLS + I  +P  +     L  L L +NK+   P+ I  +L +L  L L  N L 
Sbjct: 16  EETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEI-GNLVNLKKLGLSENGLT 74

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P D    +  L+ LDL +N +  LP  P    +  L+ L+LR  ++    ++I RL++
Sbjct: 75  SLP-DTLAALTRLETLDLRHNKLCELP--PVIYQISSLETLWLRYNRIVSIGSEIGRLKR 131

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+++DL +N ++ +P     + SL    LS N++  +P E+
Sbjct: 132 LKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEI 172


>gi|28317202|gb|AAO39608.1| GH22674p, partial [Drosophila melanogaster]
          Length = 647

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 235/556 (42%), Gaps = 107/556 (19%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL----------------------- 73
           E D WW  V L  L L+ N +  +   + NL  LTVL                       
Sbjct: 102 EEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRL 161

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           NVSHNKLS+LP A+  L  L+ L++S+N  +++  +I     L   D   N ++ LP  +
Sbjct: 162 NVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGI 221

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N I  LP DL +   + K+D+  N LT L                  
Sbjct: 222 GFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSL------------------ 263

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKL 252
                 PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    L
Sbjct: 264 ------PEDMGLLRKLDCLYLQHNDILELP-EFEGNEALNELHASNNFIKIIPKAMCSNL 316

Query: 253 SKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL  N++ E   E      L+ LD+SNN++S LP  +  +  L  L + GNP++
Sbjct: 317 PHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIK 376

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------- 358
           T+R  ++   T  +LK L  R       E      D  + +  +SVT             
Sbjct: 377 TIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIP 434

Query: 359 -----------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCAS 404
                      ++ L++    L+++P ++++      +  +D +RN +  LP  L     
Sbjct: 435 GNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKD 494

Query: 405 LQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           L T L+LS N I   P  I +  + +S L L NN L  +P++                  
Sbjct: 495 LVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE------------------ 535

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTS 522
                  F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  
Sbjct: 536 -------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRR 588

Query: 523 LTELDLSDNNISALPP 538
           L+ LDL +N+I  +PP
Sbjct: 589 LSTLDLRNNDIETVPP 604



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 319 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 378

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 379 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 438

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 439 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 498

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 499 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 558

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 559 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 618

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 619 GNPFRQPRHQILMKGTDAIMSYLRDRIP 646



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 193/483 (39%), Gaps = 104/483 (21%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++HN + +L   + +LP L  LN+S+N+  EL   I +LHML+ LD   N+I  +
Sbjct: 158 LVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSL 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA-----DCSK 161
           P  IG    L       N +KELP  L    +L      +N +TSLPED+      DC  
Sbjct: 218 PGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLY 277

Query: 162 MSKLDV------EGNK-LTVL--SNNLIASW------------------TMLTELI---- 190
           +   D+      EGN+ L  L  SNN I                       +TEL     
Sbjct: 278 LQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELC 337

Query: 191 ---------ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC------------ 229
                     S N ++ +P T+ SL+ LI L +  N I +I   I  C            
Sbjct: 338 LLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 397

Query: 230 --------------------CSLAEFYMGNNALSALPAEL---GKLSKLGTLDLHSNQLK 266
                                S+     G      +P       KL    TL ++  +L 
Sbjct: 398 AVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELT 457

Query: 267 EYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTL-RKLLLTGNPLRTLRSSLVNGP 321
               +  Q+     + V+D + N LS LP  +  M  L  +L+L+ N         V G 
Sbjct: 458 SVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNN---------VIGY 508

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV--TSKELSLEGMNLSAIPSEIWEA 379
            P  +    +R+     S  + +   L  + T   V  T +EL++       IP+ ++E 
Sbjct: 509 VPQFISQF-TRI-----SFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYEL 562

Query: 380 GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             +  L  S N I+ L    L +   L TL L  N I+  P  IL +L++++ L+L  NP
Sbjct: 563 QGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVP-PILGNLTNITHLELVGNP 621

Query: 439 LRQ 441
            RQ
Sbjct: 622 FRQ 624



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 30/208 (14%)

Query: 339 SEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           SE  T  EDL   +         SK ++LE + +       W    +  LDLS N++  +
Sbjct: 67  SEPPTRAEDLPKRLYDINEADADSKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHI 125

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
            P++ +  SL  L L  N + + P  I   L  L  L + +N L Q+P   +  +P L+ 
Sbjct: 126 SPKIENLQSLTVLTLHDNALVELPPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRH 183

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           L++SYN                        +  E   DI  L  L  LD   N++QS+P 
Sbjct: 184 LNISYN------------------------EFVELNPDISDLHMLEFLDGGHNNIQSLPG 219

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
           G   L  LT L L  N+I  LPP+LV++
Sbjct: 220 GIGFLVRLTALLLPYNHIKELPPDLVNM 247


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 152/296 (51%), Gaps = 15/296 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           ++Y++  EA     + +  D+  L L+   I+ L   + NL  L  L++ +N+L+ LP  
Sbjct: 32  KIYRDLREA-----FQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKE 86

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+LH L+SL +  N +  +P+EIG    L +   S N L  LP ++GR  NL     S 
Sbjct: 87  IGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSV 146

Query: 147 NCIT--------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           N  +         + E++ D   + +L++ GN+LT L    I     L +L  S+N L  
Sbjct: 147 NLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKE-IGKLQSLEKLDLSENSLAI 205

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L RL L  NR+ + P  I    SL +  + NN+LS LP E+G+L  L  L
Sbjct: 206 LPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLREL 265

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  N+L     E  +L+ L  L L  N L+ LP EIGK   L +L L GN L TL
Sbjct: 266 SLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 142/353 (40%), Gaps = 70/353 (19%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L +S   I  +P +I +   L K D   NQL  LP  +G+  NL       N +++LPE+
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
                                   I     L EL  S NLL  +PE IG L  L  LDL 
Sbjct: 110 ------------------------IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLS 145

Query: 216 QN--------RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            N          + I   I    +L E  +  N L+ LP E+GKL  L  LDL  N L  
Sbjct: 146 VNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAI 205

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L+ L  L L  N L+  P EIGK+ +L KL L+ N L TL   +        L
Sbjct: 206 LPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEI------GRL 259

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K LR                              ELSLEG  LS +P EI     + +L 
Sbjct: 260 KNLR------------------------------ELSLEGNRLSTLPKEIGRLKNLKELS 289

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L  N +  LP E+    +L  L L  N++   P  I   L SL  L L  NPL
Sbjct: 290 LGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKGI-AKLQSLWSLNLSKNPL 341



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS--------ELPAAIGELHMLKSLD 97
           +L++L L+HN +  L E++  L  L VL++S N  S         +   IG+L  LK L+
Sbjct: 115 NLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELN 174

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           ++ N +  +P EIG   +L K D S N L  LP  +GR  NL       N +T+ P+++ 
Sbjct: 175 LTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIG 234

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + KLD+  N L+ L    I     L EL    N L+ +P+ IG L  L  L L  N
Sbjct: 235 KLQSLEKLDLSNNSLSTLPKE-IGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN 293

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           R+ ++P  I    +L E  +  N L+ LP  + KL  L +L+L  N L  Y  +  Q
Sbjct: 294 RLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQ 350



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 155/326 (47%), Gaps = 34/326 (10%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L    I ++P  I+   +L +  +  N L+ LP E+G+L  L +L L+ N L     E
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L+ L  L LS+N L  LP  IG++  L  L L+ N                    LR
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN--------------------LR 149

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S +  +E+   S    DL  +        KEL+L G  L+ +P EI +   + KLDLS N
Sbjct: 150 SLIFRSEEIGISEEIGDLQNL--------KELNLTGNRLTTLPKEIGKLQSLEKLDLSEN 201

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
           S+  LP E+    +L+ L L  N++  +P  I   L SL  L L NN L  +P +    +
Sbjct: 202 SLAILPKEIGRLQNLKRLSLKGNRLTTFPKEI-GKLQSLEKLDLSNNSLSTLPKE-IGRL 259

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ L L  N +++LP+      L +L+EL L   +L   P +I + Q L  L L  N 
Sbjct: 260 KNLRELSLEGNRLSTLPKE--IGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNR 317

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISA 535
           L ++P+G   L SL  L+LS N +S 
Sbjct: 318 LTTLPKGIAKLQSLWSLNLSKNPLSV 343



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 24/212 (11%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G  ++  +  +L++L L  N +  L +++  L  L  L++S N L+ LP  IG L  
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LK L +  N +   P EIG   +L K D S+N L  LP  +GR  NL +     N +++L
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTL 275

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L + GN+LT L                        P+ IG    LI L
Sbjct: 276 PKEIGRLKNLKELSLGGNRLTTL------------------------PKEIGKFQNLIEL 311

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  NR+ ++P  I+   SL    +  N LS 
Sbjct: 312 RLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSV 343



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 9/186 (4%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           LSL G  +  +P +I     + KLDL  N +  LP E+    +LQ+L L  N +   P+ 
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL-------PENPPFSSL 474
           I   L +L  L L +N L  +P +    +  L++LDLS N+ SL         +     L
Sbjct: 110 I-GHLKNLKELSLSHNLLITLPEN-IGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDL 167

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +L+EL L   +L   P +I +LQ L  LDLS+NSL  +P+    L +L  L L  N ++
Sbjct: 168 QNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLT 227

Query: 535 ALPPEL 540
             P E+
Sbjct: 228 TFPKEI 233



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS  SL  +P E+ +               +L++L L  N +    +++  L  L  L
Sbjct: 196 LDLSENSLAILPKEIGR-------------LQNLKRLSLKGNRLTTFPKEIGKLQSLEKL 242

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N LS LP  IG L  L+ L +  N +  +P EIG    L +     N+L  LP  +
Sbjct: 243 DLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEI 302

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           G+  NL + +   N +T+LP+ +A    +  L++  N L+V     I  W
Sbjct: 303 GKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQKW 352



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 118/272 (43%), Gaps = 47/272 (17%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           + +L LS   +  LP +I  +  LRKL L  N L TL   +        L  L+S     
Sbjct: 47  VHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEI------GQLHNLQS----- 95

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                    LSL G  LS +P EI     + +L LS N +  LP
Sbjct: 96  -------------------------LSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLP 130

Query: 397 PELSSCASLQTLILSRN----KIKDWPDAI---LTSLSSLSCLKLDNNPLRQVPSDGFKD 449
             +    +L+ L LS N      +     I   +  L +L  L L  N L  +P +    
Sbjct: 131 ENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKE-IGK 189

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDLS N +A LP+      L +L+ L L+  +L   P +I +LQ L  LDLS N
Sbjct: 190 LQSLEKLDLSENSLAILPKE--IGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNN 247

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           SL ++P+    L +L EL L  N +S LP E+
Sbjct: 248 SLSTLPKEIGRLKNLRELSLEGNRLSTLPKEI 279



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 441 QVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
           Q PSD       + IL LS   I +LP     ++L +L++L LR  QL   P +I +L  
Sbjct: 42  QKPSD-------VHILSLSGQEIKNLPRQ--IANLKNLRKLDLRYNQLTTLPKEIGQLHN 92

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L+ L L  N L ++PE   +L +L EL LS N +  LP
Sbjct: 93  LQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLP 130


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 98  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 217 NRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+   L  N L T
Sbjct: 277 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTT 336

Query: 313 L 313
           L
Sbjct: 337 L 337



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 166 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 225 EIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 285 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 148/308 (48%), Gaps = 35/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 133

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 134 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 193

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     + +L +  N+LT+L        
Sbjct: 194 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL-------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 246 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L V +L+NN L+ LP EIG++  L++
Sbjct: 290 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQE 349

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 350 LYLIDNQL 357



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 158/348 (45%), Gaps = 39/348 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL      +N  T L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTIL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L +  N+LT L                        P  IG L  L  L
Sbjct: 108 PKEVEKLENLKELSLGSNRLTTL------------------------PNEIGQLKNLRVL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+  +IP  I    +L    +GNN L+ALP E+G+L  L +LDL SN+L     E 
Sbjct: 144 KLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 203

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL +L  L LS N L+ LP EIG++  L++L L  N L  L + +        L YLRS
Sbjct: 204 GQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTL-YLRS 262

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                  +  +T  +D+  +        K L L    L+  P EI +   +  LDL  N 
Sbjct: 263 -------NRLTTLSKDIEQLQNL-----KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ 310

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +  LP E+    +LQ   L+ N++   P  I   L +L  L L +N L
Sbjct: 311 LTTLPKEIGQLKNLQVFELNNNQLTTLPKEI-GQLQNLQELYLIDNQL 357



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 176/402 (43%), Gaps = 92/402 (22%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS      N   +LP+++     + +L++  N+LT+L                   
Sbjct: 49  RVLNLSA-----NRFKTLPKEIGKLKNLQELNLNKNQLTIL------------------- 84

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ IG L  L +L+LH N+   +P  +    +L E  +G+N L+ LP E+G+L  
Sbjct: 85  -----PKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKN 139

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++  L+ L L  N L TL
Sbjct: 140 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 199

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            + +              +L + +D   ST +                       L+ +P
Sbjct: 200 PNEI-------------GQLQKLQDLYLSTNR-----------------------LTTLP 223

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   + +L L  N +  LP E+    +LQTL L  N++      I   L +L  L 
Sbjct: 224 NEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI-EQLQNLKSLD 282

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L   P +  + +  LQ+LDL  N                        QL   P +
Sbjct: 283 LWNNQLTTFPKE-IEQLKNLQVLDLGSN------------------------QLTTLPKE 317

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           I +L+ L++ +L+ N L ++P+    L +L EL L DN +S+
Sbjct: 318 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 359



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 49/350 (14%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQE 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L +N L  +P++    +  LQ L L  N + +L ++     L +L+ L L   QL   
Sbjct: 235 LYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD--IEQLQNLKSLDLWNNQLTTF 291

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +L+ L++LDL  N L ++P+    L +L   +L++N ++ LP E+
Sbjct: 292 PKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEI 341



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 60/253 (23%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L  +PNE+ +                                 L+NL     
Sbjct: 165 TLNLGNNQLTALPNEIGQ---------------------------------LQNLK---S 188

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +S N +  +P+EIG    L +    SNQL  LP+ 
Sbjct: 189 LDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNE 248

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+L +D+     +  LD+  N+LT                   
Sbjct: 249 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTT------------------ 290

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ I  L  L  LDL  N++ ++P  I    +L  F + NN L+ LP E+G+L
Sbjct: 291 ------FPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 344

Query: 253 SKLGTLDLHSNQL 265
             L  L L  NQL
Sbjct: 345 QNLQELYLIDNQL 357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L 
Sbjct: 87  EIGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLK 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P  
Sbjct: 145 LTHNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L +L LS N ++ LP E+
Sbjct: 203 IGQLQKLQDLYLSTNRLTTLPNEI 226



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKED 63
           L LS   L  +PNE+   +N  E   G        ++  +  +LQ L L  N +  L +D
Sbjct: 212 LYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 271

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++ +N+L+  P  I +L  L+ LD+  N +  +P EIG    L  F+ ++
Sbjct: 272 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 331

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITS 151
           NQL  LP  +G+  NL +    +N ++S
Sbjct: 332 NQLTTLPKEIGQLQNLQELYLIDNQLSS 359


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 162/304 (53%), Gaps = 17/304 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N +  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRMTTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT---MLTELI 190
           G   +L+      N ++++P  LA CS + +L++E N ++ L       ++   +L++L 
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLN 340

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P   G+ + ++ L+L  N++  IP  +SG  SL    + NN L  LP  LG
Sbjct: 341 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 400

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L KL  LDL  N+L+    E   L+ L  L L+NN L+ LP  IG +T L  L L  N 
Sbjct: 401 NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL 460

Query: 310 LRTL 313
           L  L
Sbjct: 461 LTHL 464



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 207/447 (46%), Gaps = 59/447 (13%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+LI L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L          
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNEL---------- 273

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
               LDL        P  IG +++L +L L  N L  +  SL        L    + +  
Sbjct: 274 ----LDL--------PETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNI-- 319

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                 ST  E    + +R  V SK L+++   L+++P +      + +L+L+ N + ++
Sbjct: 320 ------STLPEXXFGIFSRAKVLSK-LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 372

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P ++S   SL+ LILS N +K  P   L +L  L  L L+ N L  +P++          
Sbjct: 373 PEDVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE---------- 421

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                           + L  LQ+L L   QL   P  I  L  L  L L +N L  +PE
Sbjct: 422 ---------------IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPE 466

Query: 516 GFKNLTSLTELDLSDN-NISALPPELV 541
               L +L EL L+DN N+ +LP EL 
Sbjct: 467 EIGTLENLEELYLNDNPNLHSLPFELA 493



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 196/428 (45%), Gaps = 90/428 (21%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN + 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L+      N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPETIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCS---------------------------LAEFYMGNNALSALPAELGKLSKLGT 257
           S++ C +                           L++  M +N L++LP + G  + +  
Sbjct: 302 SLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE 361

Query: 258 LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N L +L   
Sbjct: 362 LNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL--- 418

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 P  + YL+                DL           ++L L    L+ +P  I
Sbjct: 419 ------PNEIAYLK----------------DL-----------QKLVLTNNQLTTLPRGI 445

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLD 435
                +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S LS + ++
Sbjct: 446 GHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCSKLSIMSIE 504

Query: 436 NNPLRQVP 443
           N PL  +P
Sbjct: 505 NCPLSHLP 512



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 61/357 (17%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R        +  +T ++D+  ++  + ++ +E       +  +P+EI E   +  LD++ 
Sbjct: 200 RF-------NRMTTVEKDIKNLSKLIMLSIRE-----NKIKQLPAEIGELCNLITLDVAH 247

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N ++ LP E+ +C  +  L L  N++ D P+ I  +LSSL+ L L  N L  +P    K 
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPETI-GNLSSLNRLGLRYNRLSAIPRSLAKC 306

Query: 450 IPMLQILDLSYNIASLPE------------------NPPFSSLP-------HLQELYLRR 484
             + ++   + NI++LPE                  +   +SLP        + EL L  
Sbjct: 307 SALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLAT 366

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 367 NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 423



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRMTTVEK-DIKNLSKLI 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 226/469 (48%), Gaps = 56/469 (11%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S   I  IP  I   T L +     N+L  LP+ +G+ +NL     S N +TSLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + LA    +  LD+  NKLT +   +I   T L  L    N +  + E IG+L +L  LD
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPP-VIYKITSLETLWLRYNRIVAVDEQIGNLVKLKMLD 194

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           + +N+I  +PS+I    SL    +  N L+ +P E+G+                     C
Sbjct: 195 VRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGE---------------------C 233

Query: 274 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           Q  L+ LDL +N LS LP  IGK+T+L ++ +  N +R + S L N     L +++    
Sbjct: 234 Q-SLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELEN--CQQLEEFIV--- 287

Query: 334 PENEDSEASTTKEDLITMATRLS--------------------VTSKELSLEGMNLSAIP 373
              E +       +L+TM  ++                     V++  +++E   +S IP
Sbjct: 288 ---ESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344

Query: 374 SEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
             I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ I   L +L  L
Sbjct: 345 IGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDI-EKLVNLEIL 403

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L NN L+++P+       + ++      + ++P    F  L HL +L+++  ++   P 
Sbjct: 404 VLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGF--LQHLTKLWVQSNKIVSLPR 461

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
            I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 462 SIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 510



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 215/447 (48%), Gaps = 47/447 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+P  I ++  L++L + +N 
Sbjct: 117 QLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNR 176

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I+ + ++IG+   L   D   N+++ELPS++G+  +L     S N +T +PE++ +C  +
Sbjct: 177 IVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSL 236

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD++ N L+ L                        P +IG L+ L+R+ +  N+I  I
Sbjct: 237 TQLDLQHNDLSEL------------------------PYSIGKLTSLVRIGIRYNKIRCI 272

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLS--V 279
           PS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q  +S   
Sbjct: 273 PSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT 332

Query: 280 LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NE 337
           +++ +N +S +P  I  K T L KL L  N L +L   + +  +   L    ++L    E
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 338 DSEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLS 388
           D E     E L+    +L     ++          LE   L  +P+EI     +TKL + 
Sbjct: 393 DIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQ 452

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N I  LP  + +  SLQ L L  N +   P+ I   L SL  L L++N           
Sbjct: 453 SNKIVSLPRSIGNLCSLQDLRLGENNLTAIPEEI-GHLDSLKSLYLNDN-------SSLH 504

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLP 475
           ++P    L  S  I S+ EN P S +P
Sbjct: 505 NLPFELALCQSLEIMSI-ENSPLSQIP 530



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 210/439 (47%), Gaps = 39/439 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP  +YK                L+ L L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPPVIYK-------------ITSLETLWLRYNRIVAVDEQIGNLVKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L       N I  +P +L +C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++++   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWVQSNKIVSLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL+ + +  + +   P  I  
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITA 535

Query: 425 SLSSLSCLKLD-NNPLRQV 442
              SL    L    P R V
Sbjct: 536 GGPSLVIQYLKMQGPYRGV 554



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 51/231 (22%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           D+ L SL SL  L L +N L +VP   +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPPVIYK-ITSLETLWLRYNRIVAVDEQ--IGNLVKLK 191

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL-- 536
            L +R  ++RE P+ I +L  L +  +S N L  +PE      SLT+LDL  N++S L  
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPY 251

Query: 537 --------------------------------------------PPELVSV 543
                                                       PP L+++
Sbjct: 252 SIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTM 302


>gi|428168746|gb|EKX37687.1| hypothetical protein GUITHDRAFT_77856 [Guillardia theta CCMP2712]
          Length = 648

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 247/512 (48%), Gaps = 56/512 (10%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S NK+ ELP A+G L  L  LD   N++ ++P  +     L     S N L ELP  +G
Sbjct: 73  ISRNKIEELPEALGSLVSLTELDADENALSRLPQSLCELNKLRTIRLSCNSLSELPLGVG 132

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-------------EGNKLTVLSNNLIA 181
           R +NL     S+N +T +P    + S ++ L V             E   LT L++  I 
Sbjct: 133 RLVNLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAEFTGLTNLTSFSIQ 192

Query: 182 S------------WTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILSIPSSISG 228
           S            WT L EL  S N +  +P + +  L  L ++D+  N+++ +   +S 
Sbjct: 193 SNHFLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVEVREDVSR 252

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNS 286
              L  F + NN +++LP  LG L +L TL + +N+L E    +  C   L+ L LS N+
Sbjct: 253 LLHLRLFDLRNNLMTSLPGSLGALKQLDTLLVDNNKLTELTAAISDCS-SLTFLSLSKNN 311

Query: 287 LSGLPPEIGKMTTLRKLLLTGNP-LRTLRSSLVNGPTPALLKYLRSR---LPEN------ 336
           L+ LPP +G +T+L+ L +  N  L T+ + ++   +  +L   R++   LPE       
Sbjct: 312 LTSLPPPLGILTSLKTLQVMDNQLLSTMPAEVLLLSSLTVLSLARNKIEHLPEELGHRLS 371

Query: 337 ----EDSEASTTKE--DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                D E++  K+  D I +A  L    K L LE    +++PS +     + +L L+ N
Sbjct: 372 QLRMLDLESNKLKKLPDSIGIAGSL----KLLDLESNLFTSLPSVVLSLTRLEELRLAGN 427

Query: 391 SIQELPPELS---SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            + +LP EL    S ASL ++ L+ N I + P  I + L+SL  L + NN + Q+P   F
Sbjct: 428 DLSQLPLELGRLVSPASLTSITLNDNAISEVPGDI-SKLTSLVLLSMSNNNISQLPKHSF 486

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+ L+++ N +  LP      SL  L+ L L   +LRE P  + +L +LR L + 
Sbjct: 487 LLLSSLRSLNVAGNPLTVLPVT--LGSLKKLEYLDLNDNRLREIPASVCKLTRLRDLSVM 544

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            N L SI      +T+L  L L +N     PP
Sbjct: 545 DNKLLSIAPEVGLITTLRRLQLENNAKLKCPP 576



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 235/500 (47%), Gaps = 52/500 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC---------- 121
           ++N   N LS LP  +     L  L V+ N ++ +P  +    ALV  D           
Sbjct: 1   MINCDKNYLSHLPLQLNASTGLTELRVANNQLLDLPSYLDFFGALVLLDARDNVLQSLPS 60

Query: 122 -------------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
                        S N+++ELP +LG  ++L++  A  N ++ LP+ L + +K+  + + 
Sbjct: 61  SLTLLSSLTRLRISRNKIEELPEALGSLVSLTELDADENALSRLPQSLCELNKLRTIRLS 120

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR---LDLHQNRILSIPSS 225
            N L+ L    +     L  L  S N L  +P +  +LS L     L+L++N++ S+P+ 
Sbjct: 121 CNSLSELPLG-VGRLVNLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAE 179

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLS 283
            +G  +L  F + +N     PA L   + L  LDL  N++    V+  Q    LS +D+S
Sbjct: 180 FTGLTNLTSFSIQSNHFLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDVS 239

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED-SEAS 342
           +N L  +  ++ ++  LR   L  N + +L  SL        LK L + L +N   +E +
Sbjct: 240 SNQLVEVREDVSRLLHLRLFDLRNNLMTSLPGSL------GALKQLDTLLVDNNKLTELT 293

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSS 401
               D  ++          LSL   NL+++P  +     +  L +  N  +  +P E+  
Sbjct: 294 AAISDCSSLTF--------LSLSKNNLTSLPPPLGILTSLKTLQVMDNQLLSTMPAEVLL 345

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            +SL  L L+RNKI+  P+ +   LS L  L L++N L+++P D       L++LDL  N
Sbjct: 346 LSSLTVLSLARNKIEHLPEELGHRLSQLRMLDLESNKLKKLP-DSIGIAGSLKLLDLESN 404

Query: 462 I-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGF 517
           +  SLP      SL  L+EL L    L + P ++ RL     L  + L+ N++  +P   
Sbjct: 405 LFTSLPS--VVLSLTRLEELRLAGNDLSQLPLELGRLVSPASLTSITLNDNAISEVPGDI 462

Query: 518 KNLTSLTELDLSDNNISALP 537
             LTSL  L +S+NNIS LP
Sbjct: 463 SKLTSLVLLSMSNNNISQLP 482



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 202/446 (45%), Gaps = 75/446 (16%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLT---VLNVSHNKLSELPAAIGEL----------- 90
           V+L+ L L+ N + ++    RNL +LT   VLN++ N+L  LPA    L           
Sbjct: 135 VNLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAEFTGLTNLTSFSIQSN 194

Query: 91  HML------------KSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCL 137
           H L            K LD+S N I  +P +I      L + D SSNQL E+   + R L
Sbjct: 195 HFLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVEVREDVSRLL 254

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L  F   NN +TSLP  L    ++  L V+ NKLT L+   I+  + LT L  SKN L 
Sbjct: 255 HLRLFDLRNNLMTSLPGSLGALKQLDTLLVDNNKLTELTAA-ISDCSSLTFLSLSKNNLT 313

Query: 198 GMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELG-KLSKL 255
            +P  +G L+ L  L +  N++LS +P+ +    SL    +  N +  LP ELG +LS+L
Sbjct: 314 SLPPPLGILTSLKTLQVMDNQLLSTMPAEVLLLSSLTVLSLARNKIEHLPEELGHRLSQL 373

Query: 256 GTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LDL SN+LK+          L +LDL +N  + LP  +  +T L +L L GN L  L 
Sbjct: 374 RMLDLESNKLKKLPDSIGIAGSLKLLDLESNLFTSLPSVVLSLTRLEELRLAGNDLSQLP 433

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----------- 363
             L    +PA L  +   L +N  SE       L ++   LS+++  +S           
Sbjct: 434 LELGRLVSPASLTSIT--LNDNAISEVPGDISKLTSLVL-LSMSNNNISQLPKHSFLLLS 490

Query: 364 ------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL---------------------- 395
                 + G  L+ +P  +    ++  LDL+ N ++E+                      
Sbjct: 491 SLRSLNVAGNPLTVLPVTLGSLKKLEYLDLNDNRLREIPASVCKLTRLRDLSVMDNKLLS 550

Query: 396 -PPELSSCASLQTLILSRN-KIKDWP 419
             PE+    +L+ L L  N K+K  P
Sbjct: 551 IAPEVGLITTLRRLQLENNAKLKCPP 576


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 148/294 (50%), Gaps = 27/294 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L LA N ++ L +++  L  L  L++ +N+L+ LP  IG L  L+ L+++ N    +
Sbjct: 21  LQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL 80

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG+   L K   + ++L  LP  +G   NL +   ++N  T+LPE++ +  K+  LD
Sbjct: 81  PEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLD 140

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  ++LT L    I     L +L   KN L  +P+ IG L  L  L L+ N + ++P  I
Sbjct: 141 LNYSRLTTLPKE-IGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEI 199

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR---------- 276
               +L E  +G+N L+ LP ++G L KL  L L  N+LK    E   L+          
Sbjct: 200 GNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNN 259

Query: 277 --------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
                         L  L+LS NSL   P EIGK+  L+ L L GNP   LRS 
Sbjct: 260 QLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPF--LRSQ 311



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 11/261 (4%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+L N  L  +P E+   +N  E       +  +         LQKL LAH+ +  L +
Sbjct: 46  ALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPK 105

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ NL  L  LN++ N+ + LP  IG L  L++LD++++ +  +P EIG    L K +  
Sbjct: 106 EIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLY 165

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQLK LP  +G+  NL +   + N +T+LP+++ +   + +L +  N+LT L    I +
Sbjct: 166 KNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEK-IGN 224

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL  + N L  +P+ IG+L  L  L+L+ N++ ++P  I    SL    +  N+L
Sbjct: 225 LQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSL 284

Query: 243 SALPAELGKLSKLGTLDLHSN 263
            + P E+GKL KL  L L  N
Sbjct: 285 ISFPEEIGKLQKLKWLYLGGN 305



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 155/306 (50%), Gaps = 19/306 (6%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + +N L+ LP E+G L KL TLDL  NQLK    E  +L +L  L L NN L+ LP EIG
Sbjct: 3   LSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIG 62

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            +  L++L L  N   TL   + N      L    SRL         TT    I     L
Sbjct: 63  NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRL---------TTLPKEIGNLQNL 113

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               +EL+L     + +P EI    ++  LDL+ + +  LP E+     LQ L L +N++
Sbjct: 114 ----QELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQL 169

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
           K  P  I   L +L  L L+ N L  +P +   ++  LQ L L  N + +LPE     +L
Sbjct: 170 KTLPKEI-GKLQNLKNLSLNGNELTTLPKE-IGNLQNLQELSLGSNQLTTLPEK--IGNL 225

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             LQEL L   +L+  P +I  LQ L+ L+L+ N L ++P+  +NL SL  L+LS N++ 
Sbjct: 226 QKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLI 285

Query: 535 ALPPEL 540
           + P E+
Sbjct: 286 SFPEEI 291



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDLS+N + +LP+     +L  LQ L L + QL+  P +I +LQ+L  L L  N L ++P
Sbjct: 1   LDLSHNRLTTLPKE--IGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLP 58

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           +   NL +L EL+L+ N  + LP E+
Sbjct: 59  KEIGNLQNLQELNLNSNQFTTLPEEI 84


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 154/301 (51%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS ++   +P E+ K               +LQKL L  N ++ L +++  L  L  L
Sbjct: 53  LDLSGQNFTTLPKEIEK-------------LKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L     SSNQL  LP   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S+N +T+LP+++     +  L+++ N+LT L    I     L  L  S 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE-IEQLKNLQTLNLSD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L+L  N++ ++P  I    +L    +  N L+ L  E+GKL 
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQ 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+LHSNQL     E  QL+ L  L LS N L  LP EIG++  L++L L  N L  
Sbjct: 279 NLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTA 338

Query: 313 L 313
           L
Sbjct: 339 L 339



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 164/332 (49%), Gaps = 17/332 (5%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S  +   +P EI     L K     N+LK LP  +G+  NL +   S+N +T L
Sbjct: 50  VRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTIL 109

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +LD+  N+LT+L    I     L  L  S N L  +P   G L  L  L
Sbjct: 110 PKEIGKLENLQRLDLYDNRLTILPIE-IGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ ++P  I    +L    + +N L+ L  E+ +L  L TL+L  NQL    +E 
Sbjct: 169 NLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI 228

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L+LS+N L+ LP EIGK+  L  L L+GN L TL   +        L+ L+ 
Sbjct: 229 GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQD 282

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N+ +  S   E L  + T        LSL    L  +P EI +   + +L+L  N
Sbjct: 283 LNLHSNQLTTLSKEIEQLKNLQT--------LSLSYNRLVILPKEIGQLQNLQELNLWNN 334

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +  LP E+    +LQTL L +N++  +P  I
Sbjct: 335 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L  +P E+              +  +LQ L L  N +  L +++  L  L  L
Sbjct: 168 LNLSDNQLTTLPQEI-------------GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L +L++S N +  +P EIG    L   + S NQL  L   +
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL D    +N +T+L +++     +  L +  N+L +L    I     L EL    
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE-IGQLQNLQELNLWN 333

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           N L  +P  IG L  L  L L++NR+++ P  I    +L   Y+G
Sbjct: 334 NQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLG 378



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 528 LSDNNISALPPEL 540
           LSDN ++ LP E+
Sbjct: 216 LSDNQLTTLPIEI 228



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 236 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 282

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 283 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 213 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSDNQLTTLPIEIGKLQNLHT 259

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N+L+ L   IG+L  L+ L++  N +  +  EI     L     S N+L  LP  
Sbjct: 260 LNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE 319

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           +G+  NL +    NN +T+LP ++     +  L +  N+L
Sbjct: 320 IGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRL 359


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 159/345 (46%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL  LP  IG+L  L+ LD+S N ++ +P EI     L +   + NQ K  P 
Sbjct: 31  VLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPK 90

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L     SNN +T LP ++     + +L++  N+L  +S   I     L +L  
Sbjct: 91  EIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKE-IEQLKNLQKLYL 149

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L   P+ IG L  L  L L  N++ + P  I    +L E Y+ NN L+  P E+GK
Sbjct: 150 DNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGK 209

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  +L +L  L+L  N L+ +P EIG++  L+ L L+ N  
Sbjct: 210 LQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQF 269

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+         P     L++                            K LSL+   L+
Sbjct: 270 KTI---------PVEFGQLKNL---------------------------KMLSLDANQLT 293

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           A+P EI +   +  L+L  N +  +P E+    +LQTL L  N+ 
Sbjct: 294 ALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASW-------TM 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLITI 318



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 150/346 (43%), Gaps = 39/346 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   D S NQL  LP  + +  NL +   + N   + 
Sbjct: 29  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 88

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 89  PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 124

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E 
Sbjct: 125 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 184

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 235

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
               N D    TT    I     L V    L L       IP E  +   +  L L  N 
Sbjct: 236 LQELNLDVNQLTTIPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQ 291

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +  LP E+    +L+ L L  N++   P  I   L +L  L L NN
Sbjct: 292 LTALPKEIGKLKNLKMLNLDANQLITIPKEI-GQLQNLQTLYLRNN 336



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 146/352 (41%), Gaps = 84/352 (23%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N     P E
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 92  IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+T+   +                            E L  +        ++L L+   
Sbjct: 130 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 153

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 154 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 212

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 213 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 247

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 299



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 30/260 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N ++ + +++  L  L  L + +N+L+  P  IG+L  LKSL +S N +  
Sbjct: 120 NLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTT 179

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L +   S+NQL   P  +G+   L      +N +T++P ++    K+ +L
Sbjct: 180 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT                         +P+ IG L  L  L L  N+  +IP  
Sbjct: 240 NLDVNQLTT------------------------IPKEIGQLQNLQVLFLSYNQFKTIPVE 275

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
                +L    +  N L+ALP E+GKL  L  L+L +NQL     E  QL+ L  L L N
Sbjct: 276 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRN 335

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N  S     I +   +RKLL
Sbjct: 336 NQFS-----IEEKERIRKLL 350



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 196 SNNQLTTFPKEI 207



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+ K                LQ L L  N +  +  ++  L  L  
Sbjct: 192 ELYLSNNQLTTFPKEIGK-------------LQKLQWLGLGDNQLTTIPNEIGKLQKLQE 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 239 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N + ++P+++     +  L +  N+ ++
Sbjct: 299 IGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSI 340


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 216/441 (48%), Gaps = 23/441 (5%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH-MLKSLDVSFNSIM-- 104
           ++LILA N+I  L ++L  L  + VL++ +N+++ +P A+G+L   L+ L +  N +   
Sbjct: 40  RELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLRELWLCNNKLFFT 99

Query: 105 -KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +   +G    L K D S NQL+ELP+ LG+   L     S N +   P +  +   + 
Sbjct: 100 APLTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALL 159

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
               E N+L  L+   + + T L+E   + N L+ +P  IG+L  L   DL  N++  +P
Sbjct: 160 IFKAENNRLRALAPE-VGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLP 218

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDL 282
           + +     L  F +  N+       L +L++L  + L +  L E   + C L   V LDL
Sbjct: 219 AEMGYLARLRSFSVNENSNLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDL 278

Query: 283 SNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL------PE 335
            NN  +  +PPEIG++TTLR+L L GN L  L + + N     LL   ++ L      PE
Sbjct: 279 RNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPE 338

Query: 336 ----NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                       +K +L T+   +      KEL      L ++P EI     + KL++S 
Sbjct: 339 LGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNVSG 398

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LPP ++   +L  L +  N+I + P  +   LSS+  + + +N +  +P +    
Sbjct: 399 NRLLTLPPTIALLTALTKLDIKGNEIHELPSEV-GELSSVVKIDMSHNMMTNLPWE-LGS 456

Query: 450 IPMLQILDLSYNIASLPENPP 470
           +P L+++D+S+N   +P  PP
Sbjct: 457 LPKLEVMDISHNPLVIP--PP 475



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 220/458 (48%), Gaps = 49/458 (10%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNI---E 58
           D + K AR    L+L N  +  VP  +         GD    A  L++L L +N +    
Sbjct: 54  DELGKLARIE-VLDLGNNRINHVPPAL---------GDL---APTLRELWLCNNKLFFTA 100

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L  +L  L LL  L++S N+L ELPA +G+L  L+ LD+S N++   P E G+  AL+ 
Sbjct: 101 PLTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLI 160

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           F   +N+L+ L   +G    LS++  +NN ++ LP  + +   +   D+  NKL     +
Sbjct: 161 FKAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKL----QD 216

Query: 179 LIASWTMLTELIA-----SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           L A    L  L +     + NL    P  +  L++L  + L    +  +P  +    S+ 
Sbjct: 217 LPAEMGYLARLRSFSVNENSNLKTLFP--LEQLNQLQYMGLRNTLLDELPEDLCTLPSIV 274

Query: 234 EFYMGNN-ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG-- 289
           E  + NN  +  +P E+G+L+ L  LDL  N+L     E   L  L +LDL  NSL+   
Sbjct: 275 ELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIEL 334

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +PPE+G++T L +LL++ N L TL         PA +K + +        E       L+
Sbjct: 335 IPPELGRLTRLERLLMSKNNLATL---------PAEIKTMYAL------KELDAANNVLL 379

Query: 350 TMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           ++   +   S  ++L++ G  L  +P  I     +TKLD+  N I ELP E+   +S+  
Sbjct: 380 SVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVK 439

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           + +S N + + P   L SL  L  + + +NPL   P D
Sbjct: 440 IDMSHNMMTNLPWE-LGSLPKLEVMDISHNPLVIPPPD 476



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 224/493 (45%), Gaps = 54/493 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           ++++    + E+P ++ +L   + L ++ N I  +PDE+G    +   D  +N++  +P 
Sbjct: 19  IVDLRKQGIPEIPKSVRQLQC-RELILAENDITSLPDELGKLARIEVLDLGNNRINHVPP 77

Query: 132 SLGRCL-NLSDFKASNNCI---TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +LG     L +    NN +     L  +L     + KLD+ GN+L  L   L    + L 
Sbjct: 78  ALGDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLSGNQLEELPAEL-GQLSALQ 136

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S N L   P   G+L  L+      NR+ ++   +     L+E+Y+ NNALS LP 
Sbjct: 137 YLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANNALSRLPP 196

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           ++G L  L                       V DLSNN L  LP E+G +  LR   +  
Sbjct: 197 QIGNLRNL----------------------QVFDLSNNKLQDLPAEMGYLARLRSFSVNE 234

Query: 308 N-------PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL--------ITMA 352
           N       PL  L      G    L   L   LPE+  +  S  + DL        I   
Sbjct: 235 NSNLKTLFPLEQLNQLQYMG----LRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPE 290

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--IQELPPELSSCASLQTLIL 410
                T + L L G  L+ +P+EI     +  LDL +NS  I+ +PPEL     L+ L++
Sbjct: 291 IGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLM 350

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           S+N +   P  I T + +L  L   NN L  VP +    +  LQ L++S N + +LP  P
Sbjct: 351 SKNNLATLPAEIKT-MYALKELDAANNVLLSVPEE-IGCLSNLQKLNVSGNRLLTLP--P 406

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
             + L  L +L ++  ++ E P+++  L  +  +D+S N + ++P    +L  L  +D+S
Sbjct: 407 TIALLTALTKLDIKGNEIHELPSEVGELSSVVKIDMSHNMMTNLPWELGSLPKLEVMDIS 466

Query: 530 DNNISALPPELVS 542
            N +   PP++++
Sbjct: 467 HNPLVIPPPDVLN 479



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 41/381 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L ++ NN++    +  NL  L +    +N+L  L   +G L  L    ++ N++ ++
Sbjct: 135 LQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANNALSRL 194

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG+   L  FD S+N+L++LP+ +G    L  F  + N        L   +++  + 
Sbjct: 195 PPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFPLEQLNQLQYMG 254

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSS 225
           +    L  L  +L  +   + EL    NL  G +P  IG L+ L RLDL  N++ ++P+ 
Sbjct: 255 LRNTLLDELPEDL-CTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAE 313

Query: 226 ISGCCSLAEFYMGNNALSA--LPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDL 282
           I    +L    +  N+L+   +P ELG+L++L  L +  N L     E      L  LD 
Sbjct: 314 IGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDA 373

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           +NN L  +P EIG ++ L+KL ++GN L TL       PT ALL  L             
Sbjct: 374 ANNVLLSVPEEIGCLSNLQKLNVSGNRLLTL------PPTIALLTAL------------- 414

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                             +L ++G  +  +PSE+ E   + K+D+S N +  LP EL S 
Sbjct: 415 -----------------TKLDIKGNEIHELPSEVGELSSVVKIDMSHNMMTNLPWELGSL 457

Query: 403 ASLQTLILSRNKIKDWPDAIL 423
             L+ + +S N +   P  +L
Sbjct: 458 PKLEVMDISHNPLVIPPPDVL 478



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 26/311 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +  LA+N + +L   + NL  L V ++S+NKL +LPA +G L  L+S  V+ NS +K
Sbjct: 180 ELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLK 239

Query: 106 -----------------------IPDEIGSATALVKFDCSSN-QLKELPSSLGRCLNLSD 141
                                  +P+++ +  ++V+ D  +N Q+  +P  +GR   L  
Sbjct: 240 TLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRR 299

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTV-LSNNLIASWTMLTELIASKNLLNGMP 200
                N +T+LP ++ +   +  LD+  N L + L    +   T L  L+ SKN L  +P
Sbjct: 300 LDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLP 359

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I ++  L  LD   N +LS+P  I    +L +  +  N L  LP  +  L+ L  LD+
Sbjct: 360 AEIKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDI 419

Query: 261 HSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N++ E   E  +L   V +D+S+N ++ LP E+G +  L  + ++ NPL      ++N
Sbjct: 420 KGNEIHELPSEVGELSSVVKIDMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLN 479

Query: 320 GPTPALLKYLR 330
             TPA+L +LR
Sbjct: 480 RGTPAVLAWLR 490


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 224/490 (45%), Gaps = 41/490 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L L+++++  L + +R    L  LN+ +N L ELP  + +L  L+ L +S N +  +
Sbjct: 80  VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 139

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P++I     L +     N+L+ LP++L     L+   A NN + S+PE L    ++  L 
Sbjct: 140 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 199

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L   L  + + L  L    N L  +PE +  L +L  L    N +  +P  I
Sbjct: 200 LDKNQLQYLPETLSGA-SALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQI 258

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  + +N L  LP  +G+L KL  L L  NQLK+      QL+ L  L L +N
Sbjct: 259 GSSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSN 318

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP   G++  L  L L+ N L +L S + N       K LR               
Sbjct: 319 QLTVLPINFGELRALENLYLSDNQLTSLPSGIGN------CKELR--------------- 357

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                          EL L    ++++P  +    ++ +L ++ N I  LP       +L
Sbjct: 358 ---------------ELFLNNNAMTSLPDSMGTLYQLEELYMNDNQIANLPSSFGGLKNL 402

Query: 406 QTLILSRNKIKDWPDAI-LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           + L L+ NKI    + +  +    LS + L+NN  +++P    +  P LQ L L  N+ S
Sbjct: 403 KLLFLTNNKINRLSEDLDCSGWKRLSAIYLENNAFQKLPK-ALETAPQLQTLYLDGNLIS 461

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
              +     +P ++ + L   QL E P D +    +R L L +N +  +PE  +   +L 
Sbjct: 462 EVNDSIIIKMPKIEHISLNDNQLSELP-DNMGSWPIRHLALERNGIMDLPESIRYFKNLE 520

Query: 525 ELDLSDNNIS 534
            LDL+ N I+
Sbjct: 521 LLDLAGNKIT 530



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 215/477 (45%), Gaps = 45/477 (9%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           GD   E   L  L L +N +++L + L +LP L  L +S+N+L  LP  I  L  L+ L 
Sbjct: 94  GDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLY 153

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  N +  +P+ +     L      +NQL+ +P +LG+   L       N +  LPE L+
Sbjct: 154 IDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS 213

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             S +  L ++ N+L  L   LI     LT L A+ N L  +P  IGS   L++L +  N
Sbjct: 214 GASALEVLAIDDNRLKKLPEALIY-LKKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHN 272

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P SI     L    + +N L  LP   G+L  L  L L SNQL    +   +LR 
Sbjct: 273 QLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGELRA 332

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPE 335
           L  L LS+N L+ LP  IG    LR+L L  N + +L  S+  G    L + Y+      
Sbjct: 333 LENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSM--GTLYQLEELYMNDNQIA 390

Query: 336 NEDSEASTTK--EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           N  S     K  + L     +++  S++L   G          W+   ++ + L  N+ Q
Sbjct: 391 NLPSSFGGLKNLKLLFLTNNKINRLSEDLDCSG----------WK--RLSAIYLENNAFQ 438

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
           +LP  L +   LQTL L  N I +  D+I+  +  +  + L++N L ++P          
Sbjct: 439 KLPKALETAPQLQTLYLDGNLISEVNDSIIIKMPKIEHISLNDNQLSELPD--------- 489

Query: 454 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
                  N+ S P          ++ L L R  + + P  I   + L +LDL+ N +
Sbjct: 490 -------NMGSWP----------IRHLALERNGIMDLPESIRYFKNLELLDLAGNKI 529



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 37/341 (10%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+ RLDL  + ++S+  SI     L    + NN L  LP         G  DL       
Sbjct: 79  RVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPD--------GLFDLPY----- 125

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                    L  L LSNN L  LP +I  +  LR+L + GN LR L ++L      A + 
Sbjct: 126 ---------LEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIA 176

Query: 328 YLRSRL---PEN-----EDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIW 377
              ++L   PE              K  L  +   LS  S  + L+++   L  +P  + 
Sbjct: 177 AENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALI 236

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++T L  + N +QELPP++ S  +L  L +  N+++  P++I   L  L  L+L++N
Sbjct: 237 YLKKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESI-GQLQKLELLRLEHN 295

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L+Q+P + F  +  L+ L L  N +  LP N  F  L  L+ LYL   QL   P+ I  
Sbjct: 296 QLKQLPKN-FGQLKALRKLYLDSNQLTVLPIN--FGELRALENLYLSDNQLTSLPSGIGN 352

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            ++LR L L+ N++ S+P+    L  L EL ++DN I+ LP
Sbjct: 353 CKELRELFLNNNAMTSLPDSMGTLYQLEELYMNDNQIANLP 393



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 17/201 (8%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           I  A  +      L L   +L ++   I E   +  L+L  N ++ELP  L     L+ L
Sbjct: 70  IETAMEVKDRVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEEL 129

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            LS N+++  P+ I   L +L  L +D N LR +P++      + +I  L++ IA+  EN
Sbjct: 130 RLSNNQLQYLPEKI-KGLRNLRRLYIDGNELRMLPNN------LAEIRKLAF-IAA--EN 179

Query: 469 PPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
               S+P        L+ L L + QL+  P  +     L +L +  N L+ +PE    L 
Sbjct: 180 NQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLK 239

Query: 522 SLTELDLSDNNISALPPELVS 542
            LT L  + N +  LPP++ S
Sbjct: 240 KLTFLFAAHNELQELPPQIGS 260



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 27/145 (18%)

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
           +     L  L L+NN L+++P DG  D+P L+ L LS N +  LPE      L +L+ LY
Sbjct: 97  IREFRHLFFLNLENNYLKELP-DGLFDLPYLEELRLSNNQLQYLPEK--IKGLRNLRRLY 153

Query: 482 LRRMQLREAPTDILRLQQLRIL-----------------------DLSQNSLQSIPEGFK 518
           +   +LR  P ++  +++L  +                        L +N LQ +PE   
Sbjct: 154 IDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS 213

Query: 519 NLTSLTELDLSDNNISALPPELVSV 543
             ++L  L + DN +  LP  L+ +
Sbjct: 214 GASALEVLAIDDNRLKKLPEALIYL 238


>gi|256073912|ref|XP_002573271.1| shoc2 [Schistosoma mansoni]
          Length = 515

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 28/300 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           +L+ L+L +N +  + ++++ L  L+VL VS N +  +LP++IGEL  L  LD+SFN I 
Sbjct: 176 NLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHIT 235

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD IG  T+L   +   NQL +LP S+G  +NL       N +  +P  LA+C K+ +
Sbjct: 236 FLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDE 295

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL------------------------LNGMP 200
            +VE N+L+ L NNL+     L  +  S+N                         +  +P
Sbjct: 296 FNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIP 355

Query: 201 ETIGSL-SRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +++ SL S LI+L+L  N + S I   +    +L E  +G+N LS LP E+ KL  L  L
Sbjct: 356 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVL 415

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ NQL     E  QL +L +LDL +N L  LP ++  +T+L++L +  N L+T  +S+
Sbjct: 416 RLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASI 475



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 186/412 (45%), Gaps = 62/412 (15%)

Query: 106 IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP+EI   T L + D   N+L   LP+ +    NL     + N +T + +++    ++S 
Sbjct: 143 IPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSV 202

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L        V+S NLI                  +P +IG L++L++LDL  N I  +P 
Sbjct: 203 L--------VVSRNLIRQ---------------DLPSSIGELTKLVKLDLSFNHITFLPD 239

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 283
           SI  C SL +  + +N L+ LP  +G L  L  L +  NQL E     A  ++L   ++ 
Sbjct: 240 SIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVE 299

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN LS LP  +  +  L  LL     +   R+   N P+    ++        + +E + 
Sbjct: 300 NNQLSSLPNNL--LPCLHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITN 353

Query: 344 TKEDLITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             + + ++A+ L     +L+L    L S I  ++ E   + +LDL  N + ELP E++  
Sbjct: 354 IPKSVFSLASNLI----KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKL 409

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
            +L+ L L+ N++   PD I T LS L  L L++N L  +P+D                 
Sbjct: 410 VALEVLRLNYNQLTSLPDEI-TQLSKLRILDLESNLLESLPND----------------- 451

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
                    S L  LQEL +   +L+  P  I +L +L+++   +N +  IP
Sbjct: 452 --------LSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIP 495



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 169/362 (46%), Gaps = 29/362 (8%)

Query: 190 IASKNLL--NGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALP 246
           +A +N L  +G+P  I  L+ L +LDL  NR+   +P+ I G  +L    +  N L+ + 
Sbjct: 132 VAQQNWLTASGIPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIV 191

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            E+  L +L  L +  N +++    +     +L  LDLS N ++ LP  IGK T+LR L 
Sbjct: 192 DEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLN 251

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  S+ N      L    ++L E   S A+  K D             E ++
Sbjct: 252 LQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLD-------------EFNV 298

Query: 365 EGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP----PELSSCASLQTLILSRNKIKDWP 419
           E   LS++P+ +      +  + LSRN     P     +   C    T+ +  N+I + P
Sbjct: 299 ENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCY---TINMDHNEITNIP 355

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
            ++ +  S+L  L L +N L  +      ++  L  LDL  N ++ LP     + L  L+
Sbjct: 356 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTE--INKLVALE 413

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   QL   P +I +L +LRILDL  N L+S+P     LTSL EL++  N +   P 
Sbjct: 414 VLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPA 473

Query: 539 EL 540
            +
Sbjct: 474 SI 475



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 49/278 (17%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L KL L+ N+I  L + +     L  LN+ HN+L++LP +IG L  L  L + +N 
Sbjct: 220 ELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQ 279

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLP----EDLA 157
           +++IP  + +   L +F+  +NQL  LP++L  CL NL +   S N  T+ P    +   
Sbjct: 280 LVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQ 339

Query: 158 DC---------------------SKMSKLDVEGNKLTVL-----------------SNNL 179
            C                     S + KL++  N L  L                 SN L
Sbjct: 340 MCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRL 399

Query: 180 IASWTMLTELIA------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
               T + +L+A      + N L  +P+ I  LS+L  LDL  N + S+P+ +SG  SL 
Sbjct: 400 SELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQ 459

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 460 ELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 497



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 5/174 (2%)

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           S IP+EI +   + +LDL  N +   LP  +    +L+ L+L+ NK+    D I   L  
Sbjct: 141 SGIPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEI-KYLKR 199

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           LS L +  N +RQ       ++  L  LDLS+N I  LP++        L++L L+  QL
Sbjct: 200 LSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDS--IGKCTSLRDLNLQHNQL 257

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            + P  I  L  L  L +  N L  IP    N   L E ++ +N +S+LP  L+
Sbjct: 258 TKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLL 311



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 30/191 (15%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAI----GELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           D +   +   +N+ HN+++ +P ++      L  L   D + +S++  PD +     LV+
Sbjct: 334 DPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIG-PD-LHELKTLVE 391

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D  SN+L ELP+ + + + L   + + N +TSLP+++   SK+  LD+E N        
Sbjct: 392 LDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESN-------- 443

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                           LL  +P  +  L+ L  L++  NR+ + P+SI     L     G
Sbjct: 444 ----------------LLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAG 487

Query: 239 NNALSALPAEL 249
            N ++ +P E+
Sbjct: 488 ENDITDIPVEI 498



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G    E   L +L L  N + +L  ++  L  L VL +++N+L+ LP  I +L  L+ LD
Sbjct: 380 GPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILD 439

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +  N +  +P+++   T+L + +   N+LK  P+S+G+   L    A  N IT +P ++
Sbjct: 440 LESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEI 498


>gi|360042765|emb|CCD78175.1| putative shoc2 [Schistosoma mansoni]
          Length = 542

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 28/300 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           +L+ L+L +N +  + ++++ L  L+VL VS N +  +LP++IGEL  L  LD+SFN I 
Sbjct: 203 NLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHIT 262

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD IG  T+L   +   NQL +LP S+G  +NL       N +  +P  LA+C K+ +
Sbjct: 263 FLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDE 322

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL------------------------LNGMP 200
            +VE N+L+ L NNL+     L  +  S+N                         +  +P
Sbjct: 323 FNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIP 382

Query: 201 ETIGSL-SRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +++ SL S LI+L+L  N + S I   +    +L E  +G+N LS LP E+ KL  L  L
Sbjct: 383 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVL 442

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ NQL     E  QL +L +LDL +N L  LP ++  +T+L++L +  N L+T  +S+
Sbjct: 443 RLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASI 502



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 208/456 (45%), Gaps = 64/456 (14%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN--SIMKIPDEIGSATALVKFDC 121
            ++L  +  L +  NKL+ LP++I  L  LK L +  N  +   IP+EI   T L + D 
Sbjct: 126 FKDLSFIKDLFLYGNKLTTLPSSISHLTNLKRLLLQQNWLTASGIPNEITKLTNLEQLDL 185

Query: 122 SSNQLK-ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             N+L   LP+ +    NL     + N +T + +++    ++S L        V+S NLI
Sbjct: 186 RYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVL--------VVSRNLI 237

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                             +P +IG L++L++LDL  N I  +P SI  C SL +  + +N
Sbjct: 238 RQ---------------DLPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHN 282

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP  +G L  L  L +  NQL E     A  ++L   ++ NN LS LP  +  +  
Sbjct: 283 QLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNL--LPC 340

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  LL     +   R+   N P+    ++        + +E +   + + ++A+ L    
Sbjct: 341 LHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKSVFSLASNLI--- 393

Query: 360 KELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +L+L    L S I  ++ E   + +LDL  N + ELP E++   +L+ L L+ N++   
Sbjct: 394 -KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSL 452

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD I T LS L  L L++N L  +P+D                          S L  LQ
Sbjct: 453 PDEI-TQLSKLRILDLESNLLESLPND-------------------------LSGLTSLQ 486

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           EL +   +L+  P  I +L +L+++   +N +  IP
Sbjct: 487 ELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIP 522



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 30/396 (7%)

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL--NGMPETIGSLSRLIRLD 213
             D S +  L + GNKLT L ++ I+  T L  L+  +N L  +G+P  I  L+ L +LD
Sbjct: 126 FKDLSFIKDLFLYGNKLTTLPSS-ISHLTNLKRLLLQQNWLTASGIPNEITKLTNLEQLD 184

Query: 214 LHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           L  NR+   +P+ I G  +L    +  N L+ +  E+  L +L  L +  N +++    +
Sbjct: 185 LRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSS 244

Query: 273 CQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                +L  LDLS N ++ LP  IGK T+LR L L  N L  L  S+ N      L    
Sbjct: 245 IGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKY 304

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSR 389
           ++L E   S A+  K D             E ++E   LS++P+ +      +  + LSR
Sbjct: 305 NQLVEIPASLANCVKLD-------------EFNVENNQLSSLPNNLLPCLHNLLNITLSR 351

Query: 390 NSIQELP----PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           N     P     +   C    T+ +  N+I + P ++ +  S+L  L L +N L  +   
Sbjct: 352 NYFTNFPSGDPQQFQMCY---TINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGP 408

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              ++  L  LDL  N ++ LP     + L  L+ L L   QL   P +I +L +LRILD
Sbjct: 409 DLHELKTLVELDLGSNRLSELPTE--INKLVALEVLRLNYNQLTSLPDEITQLSKLRILD 466

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  N L+S+P     LTSL EL++  N +   P  +
Sbjct: 467 LESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASI 502



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 51/279 (18%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L KL L+ N+I  L + +     L  LN+ HN+L++LP +IG L  L  L + +N 
Sbjct: 247 ELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQ 306

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPE------- 154
           +++IP  + +   L +F+  +NQL  LP++L  CL NL +   S N  T+ P        
Sbjct: 307 LVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQ 366

Query: 155 ------------------------------------------DLADCSKMSKLDVEGNKL 172
                                                     DL +   + +LD+  N+L
Sbjct: 367 MCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRL 426

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           + L    I     L  L  + N L  +P+ I  LS+L  LDL  N + S+P+ +SG  SL
Sbjct: 427 SELPTE-INKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSL 485

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 486 QELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 524



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 5/174 (2%)

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           S IP+EI +   + +LDL  N +   LP  +    +L+ L+L+ NK+    D I   L  
Sbjct: 168 SGIPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEI-KYLKR 226

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           LS L +  N +RQ       ++  L  LDLS+N I  LP++        L++L L+  QL
Sbjct: 227 LSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDS--IGKCTSLRDLNLQHNQL 284

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            + P  I  L  L  L +  N L  IP    N   L E ++ +N +S+LP  L+
Sbjct: 285 TKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLL 338



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 30/191 (15%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAI----GELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           D +   +   +N+ HN+++ +P ++      L  L   D + +S++  PD +     LV+
Sbjct: 361 DPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIG-PD-LHELKTLVE 418

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D  SN+L ELP+ + + + L   + + N +TSLP+++   SK+  LD+E N        
Sbjct: 419 LDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESN-------- 470

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                           LL  +P  +  L+ L  L++  NR+ + P+SI     L     G
Sbjct: 471 ----------------LLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAG 514

Query: 239 NNALSALPAEL 249
            N ++ +P E+
Sbjct: 515 ENDITDIPVEI 525



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G    E   L +L L  N + +L  ++  L  L VL +++N+L+ LP  I +L  L+ LD
Sbjct: 407 GPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILD 466

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +  N +  +P+++   T+L + +   N+LK  P+S+G+   L    A  N IT +P ++
Sbjct: 467 LESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEI 525


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           + +N +  L +++  L  L  L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+  NL     S N +T+LP+++     +  LD+  N+
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNR 120

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L EL    N L  +P  IG L  L  L+L  NR+ ++   I    +
Sbjct: 121 LTTLPQE-IGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQN 179

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ L
Sbjct: 180 LKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTL 239

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EI ++  L+ L L+ N L+TL
Sbjct: 240 PQEIKQLKNLQLLDLSYNQLKTL 262



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 41  NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 100

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D S+N+L  LP  +G   NL +    +N +T LP ++     +  L
Sbjct: 101 LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTL 160

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS   I     L  L    N L   P+ IG L  L  LDL  N++ ++P  
Sbjct: 161 NLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG 219

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+ +L  L  LDL  NQLK    E  QL+ L  L L  
Sbjct: 220 IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGY 279

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N L+ LP EIG++  L+ L 
Sbjct: 280 NQLTVLPKEIGQLQNLKVLF 299



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L +++  L  L  LN+S+N++  +P  I +L  L+SL +  N +  +
Sbjct: 19  LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTL 78

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S+N+L  LP  +G+  NL     S N +T+LP+++     + +L 
Sbjct: 79  PQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELY 138

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT+L N  I     L  L    N L  + + I  L  L  LDL  N++   P  I
Sbjct: 139 LVSNQLTILPNE-IGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 197

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G+N L+ LP  +G+L  L TLDL SNQL     E  QL+ L +LDLS N
Sbjct: 198 GQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYN 257

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LP EI ++  L+ L L  N L  L
Sbjct: 258 QLKTLPKEIEQLKNLQTLYLGYNQLTVL 285



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 154/334 (46%), Gaps = 38/334 (11%)

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S NQ+K +P  + + 
Sbjct: 3   NNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKL 62

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L      NN +T+LP+++     +  LD+  N+LT L                     
Sbjct: 63  QKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL--------------------- 101

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
              P+ IG L  L  LDL  NR+ ++P  I    +L E Y+ +N L+ LP E+G+L  L 
Sbjct: 102 ---PQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQ 158

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L TL  
Sbjct: 159 TLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL-- 216

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  P  +  L++    + DS   TT    I     L +    L L    L  +P E
Sbjct: 217 -------PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQL----LDLSYNQLKTLPKE 265

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           I +   +  L L  N +  LP E+    +L+ L 
Sbjct: 266 IEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 299



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 154/326 (47%), Gaps = 42/326 (12%)

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N++ ++P  I     L   Y+  N L+ LP E+G+L  L +L+L  NQ+K    E  +L 
Sbjct: 4   NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 63

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +L  L L NN L+ LP EIG++  L+ L L+ N L TL   +        L+ L+S    
Sbjct: 64  KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI------GQLQNLQS---- 113

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                                     L L    L+ +P EI     + +L L  N +  L
Sbjct: 114 --------------------------LDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 147

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+    +LQTL L  N++      I   L +L  L L +N L   P +    +  LQ+
Sbjct: 148 PNEIGQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQV 205

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDL  N + +LPE      L +LQ L L   QL   P +I +L+ L++LDLS N L+++P
Sbjct: 206 LDLGSNQLTTLPEG--IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLP 263

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           +  + L +L  L L  N ++ LP E+
Sbjct: 264 KEIEQLKNLQTLYLGYNQLTVLPKEI 289



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 140/306 (45%), Gaps = 42/306 (13%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           M NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS N +  +P EI 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  L+ L L  N L TL   +        L+ L+S                        
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEI------GQLQNLQS------------------------ 90

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                 L L    L+ +P EI +   +  LDLS N +  LP E+    +LQ L L  N++
Sbjct: 91  ------LDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQL 144

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P+ I   L +L  L L NN L  + S   + +  L+ LDL  N +   P+      L
Sbjct: 145 TILPNEI-GQLKNLQTLNLRNNRLTTL-SKEIEQLQNLKSLDLRSNQLTIFPKE--IGQL 200

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQ L L   QL   P  I +L+ L+ LDL  N L ++P+  K L +L  LDLS N + 
Sbjct: 201 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLK 260

Query: 535 ALPPEL 540
            LP E+
Sbjct: 261 TLPKEI 266


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E             +  +  +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    +G+N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 294 PKEIGQLKNLQVLDLGSNQLTTL 316



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 155/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  + S   + 
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTL-SKEIEQ 276

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        QL   P +I +L+ L++LDL  N 
Sbjct: 277 LQNLKSLDLGSN------------------------QLTTFPKEIGQLKNLQVLDLGSNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 343



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 173/363 (47%), Gaps = 45/363 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    I     L 
Sbjct: 39  DLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IGQLKNLR 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  N L+ LP 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 248 ELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           E+G+L  L +L+L  NQ+K     +E  Q +L  L L NN L+ LP EIG++  L+ L L
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKKIEKLQ-KLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           + N L TL         P  + +L++              +DL  ++ +L++        
Sbjct: 217 STNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI-------- 246

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
                 +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +P  I   
Sbjct: 247 ------LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEI-GQ 299

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
           L +L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +LQEL+L  
Sbjct: 300 LKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQ--EIGQLQNLQELFLNN 356

Query: 485 MQL 487
            QL
Sbjct: 357 NQL 359



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLGSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLQSLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 337



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 42/333 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L     
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSL----- 165

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                        ++L+L+   L A+P+EI +   + +L LS N
Sbjct: 166 -----------------------------QKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           L  +P+    L +L  L L++N +S+   E + 
Sbjct: 313 LTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQ 345



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 147/307 (47%), Gaps = 23/307 (7%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQS 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                    P  +  L++ +L  + ++E +   ++ I    +L      L L    L+ +
Sbjct: 225 ---------PKEIGQLQNLKLLYSVNNELTILPQE-IGQLQKLQY----LYLSHNQLTTL 270

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   + +L L+ N +  LP E+    +LQT I   N++   P  I   L +L  L
Sbjct: 271 PKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI-GQLQNLQWL 329

Query: 433 KLDNNPL 439
           KL+NN L
Sbjct: 330 KLNNNQL 336



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L  LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 528 LSDNNISALPPEL 540
           L DN ++ LP E+
Sbjct: 216 LGDNQLTILPKEI 228


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 140/269 (52%), Gaps = 2/269 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L+ L L HN +  L E +  L  L +LN+ HN L ELP +I +L  LKSL ++ N 
Sbjct: 113 ELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNK 172

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ IG    L   D  SN+L+ +P  +G+  NL       N +  +PE + +   +
Sbjct: 173 LAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHL 232

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L +  N+LT L  + IA    L +L    N L G+P   G L  L  ++L  NRI + 
Sbjct: 233 KELHLSHNRLTFLPAS-IAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTF 291

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P +I+    L    + +N L++LPA +G L +L  L L+ NQL +      +L  L+ L 
Sbjct: 292 PIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLS 351

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L NN L+ +P EI  +  L  L+L GNP+
Sbjct: 352 LINNKLTDVPIEIQNLPNLEYLVLEGNPI 380



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 185/395 (46%), Gaps = 44/395 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +K+ L+N   +  LN+S+ +L+ LP  I  L  L  L VS N I  +P  I     L + 
Sbjct: 15  MKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEEL 74

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             + N L  LP S+G+   L +   ++N +T LPE + +   +  L ++ N+LTVL    
Sbjct: 75  WFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVL---- 130

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               PE+IG L  L  L+L  N ++ +P SIS   +L   Y+  
Sbjct: 131 --------------------PESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNK 170

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP  +G L  L  LD  SN+L+    E  QL+ L  L +  N L+ +P  IG++ 
Sbjct: 171 NKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELE 230

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--------------NEDSEASTT 344
            L++L L+ N L  L +S+    T   L  L ++L                N      TT
Sbjct: 231 HLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITT 290

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               IT  T+L    K L+L+   L+++P+ +    ++  L L+ N + +LP  +    +
Sbjct: 291 FPIAITKLTQL----KSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTN 346

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L TL L  NK+ D P  I  +L +L  L L+ NP+
Sbjct: 347 LTTLSLINNKLTDVPIEI-QNLPNLEYLVLEGNPI 380



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 12/328 (3%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKL 50
           M   LK       LN+SN+ L  +P  + +       G      E +         L++L
Sbjct: 15  MKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEEL 74

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
              HN++  L E +  L  L  L ++HN L++LP +IGEL  L+ L +  N +  +P+ I
Sbjct: 75  WFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESI 134

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G    L   +   N L ELP S+ +  NL     + N +  LPE +     +  LD + N
Sbjct: 135 GKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  +    I     L  L    N L  +PE+IG L  L  L L  NR+  +P+SI+   
Sbjct: 195 RLQSIPEE-IGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLK 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L + Y+  N L+ LP   GKL  L  ++L  N++  + +   +L +L  L L +N L+ 
Sbjct: 254 TLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTS 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           LP  +G +  L  L L  N L  L  S+
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSI 341



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 148/346 (42%), Gaps = 46/346 (13%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L+ L +  N+I  +PS+I     L E +  +N L  LP  +GKL KL
Sbjct: 35  LTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKL 94

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L+ N L +      +L  L  L L +N L+ LP  IGK+  L  L L  N      
Sbjct: 95  HELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHN------ 148

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAI 372
                                           DLI +   +S     K L L    L+ +
Sbjct: 149 --------------------------------DLIELPESISKLQNLKSLYLNKNKLAVL 176

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  I     +  LD   N +Q +P E+    +L+ L +  N +   P++I   L  L  L
Sbjct: 177 PESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESI-GELEHLKEL 235

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L +N L  +P+     +  L+ L L YN +  LP  P F  L HL+++ L   ++   P
Sbjct: 236 HLSHNRLTFLPA-SIAQLKTLKDLYLLYNKLTGLP--PGFGKLQHLKDINLSHNRITTFP 292

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             I +L QL+ L L  N L S+P    NL  L  L L+DN +  LP
Sbjct: 293 IAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLP 338


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 236/537 (43%), Gaps = 98/537 (18%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEA-----VDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           R+L+D P +VY+  D +G+  K           LQ+L LA + ++ +  ++  L  L ++
Sbjct: 29  RALKD-PTKVYR-LDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIV 86

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SHN+L +LP  + +L  L +L+++ N I ++P  I     L   +   N +K+LP+ L
Sbjct: 87  DLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAEL 146

Query: 134 GRCLNLSDFKA-------------SNNCITSLPEDLADCSKMSKLDVEG------NKLTV 174
            +   L+  KA              N   T+L E L   +++ KL++         KL  
Sbjct: 147 TQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKK 206

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L N        L  L  + N L  +P+ +GSL  L  L L  N + ++P  I     L +
Sbjct: 207 LKN--------LEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKK 258

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             +  N +  LP ELGKL +L  LDL++N+LK    E  +L  L  LDLS N L  LP E
Sbjct: 259 LNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQE 318

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +     L KL L GN L  L  +L N      L+ L                        
Sbjct: 319 LTNAQALEKLNLRGNALTQLPKNLGN------LQQL------------------------ 348

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                 K L+L+   L  +P  + +   +  LDL  N++++LP  L     L+ L L +N
Sbjct: 349 ------KRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKN 402

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
            +   P++I   L +L  L    N L  +P +    +  L+ ++L+YN            
Sbjct: 403 ALTKLPESI-GKLQNLESLDSWGNALEGLP-ESIGGLKKLKKMNLAYN------------ 448

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS-LQSIPEGFKNLTSLTELDLS 529
                       QL E P  + +L+ L+ L+L  NS LQ +P+   NL +L    + 
Sbjct: 449 ------------QLTELPESLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQ 493



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 198/458 (43%), Gaps = 80/458 (17%)

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI------------- 190
           A     TS    L D +K+ +LD+ G KL  +S N I  +T L EL              
Sbjct: 19  AKEKVYTSWQRALKDPTKVYRLDLSGQKLKAISRN-IHVFTRLQELKLAQDQLDSINSEV 77

Query: 191 ----------ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                      S N L  +PE +  L  L  L+L  N+I  +P+ I+    L    +  N
Sbjct: 78  TALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGN 137

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKE------------------------YCVEACQLR 276
            +  LPAEL +LS+L TL      L +                        Y +E   LR
Sbjct: 138 PIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLR 197

Query: 277 ------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                       L VL L+NN+L  LP E+G + +L++L L  N L+T+   +  G    
Sbjct: 198 QIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEI--GDLQQ 255

Query: 325 LLKY-LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           L K  L+    E    E    K+             ++L L    L  +P E+ +   + 
Sbjct: 256 LKKLNLKMNRVEGLPKELGKLKQ------------LEQLDLYNNRLKTVPKELGKLTALK 303

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           KLDLSRN +Q LP EL++  +L+ L L  N +   P   L +L  L  L LD N L  +P
Sbjct: 304 KLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKN-LGNLQQLKRLNLDANRLVGLP 362

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            +    +  L+ LDL  N +  LPE+     L  L+ L LR+  L + P  I +LQ L  
Sbjct: 363 -ESLGKLKNLESLDLRENALKKLPES--LGGLEKLKNLQLRKNALTKLPESIGKLQNLES 419

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LD   N+L+ +PE    L  L +++L+ N ++ LP  L
Sbjct: 420 LDSWGNALEGLPESIGGLKKLKKMNLAYNQLTELPESL 457



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 38/254 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L+ VP E+ K                L+KL L+ N ++ L ++L N   L  
Sbjct: 281 QLDLYNNRLKTVPKELGK-------------LTALKKLDLSRNRLQNLPQELTNAQALEK 327

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N L++LP  +G L  LK L++  N ++ +P+ +G    L   D   N LK+LP S
Sbjct: 328 LNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPES 387

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG    L + +   N +T LPE +     +  LD               SW         
Sbjct: 388 LGGLEKLKNLQLRKNALTKLPESIGKLQNLESLD---------------SWG-------- 424

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELGK 251
            N L G+PE+IG L +L +++L  N++  +P S+    +L    + NN+ L  LP  LG 
Sbjct: 425 -NALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPKSLGN 483

Query: 252 LSKLGTLDLHSNQL 265
           L  L +  +  ++L
Sbjct: 484 LKNLQSFKMQFDKL 497



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
           N   ++L +LQ + L   QL + P  + +L+ L  L+L+ N ++ +P G   L  L  L+
Sbjct: 74  NSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLN 133

Query: 528 LSDNNISALPPELVSV 543
           +  N I  LP EL  +
Sbjct: 134 IVGNPIKKLPAELTQL 149


>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
           27064]
          Length = 309

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 139/266 (52%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N   +  + +  L  L VL++  N LS +P+ +G L  ++ L+++ N +  +
Sbjct: 24  LTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSV 83

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-KASNNCITSLPEDLADCSKMSKL 165
           P EIG+ + L   D   N+L ++P SLG    LS +   S+N ITS+P+ L     +  L
Sbjct: 84  PAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYL 143

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L          L EL    N L G+P +IG+L  L    L  NR+  +P  
Sbjct: 144 NITDNRLTALPER-FGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE 202

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I G   L E  + +N ++ALP  +G L +L  LDL +N+L+       +L RL+ LDL N
Sbjct: 203 IGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRN 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L  LPP +  +  L KL L  NPL
Sbjct: 263 NRLHELPPTLAALPRLEKLDLRWNPL 288



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 143/315 (45%), Gaps = 21/315 (6%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           +A   +  N L  LPA+LG+L +L  L L SNQ   +      L  L VL L  N LS +
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  +G +  +R L L GN     R S V     AL +     L  NE ++   +  D+  
Sbjct: 61  PSGLGGLREIRVLNLAGN-----RLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTG 115

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +       S+ L L    ++++P  +   G +  L+++ N +  LP      ASL+ L L
Sbjct: 116 L-------SRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRL 168

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPEN 468
             N++   P +I  +L  L    L  N L  +P +  G  D+  L+++D    + +LP+ 
Sbjct: 169 YHNRLTGLPRSI-GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMD--NRVTALPDT 225

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L  L  L LR  +LR  P  I RL +L  LDL  N L  +P     L  L +LDL
Sbjct: 226 --IGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDL 283

Query: 529 SDNNISALP-PELVS 542
             N ++  P P  VS
Sbjct: 284 RWNPLALDPLPAWVS 298



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 129/292 (44%), Gaps = 42/292 (14%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           ++ LDLS N L  LP ++G++  L +L L  N       +++      +L   R+ L  N
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGL-SN 59

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             S     +E             + L+L G  LS++P+EI     +  LDL  N + ++P
Sbjct: 60  VPSGLGGLRE------------IRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIP 107

Query: 397 PELSSCASL-QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P L     L + L LS NKI   PD+ L  L  L  L + +N L  +P + F D+  L+ 
Sbjct: 108 PSLGDVTGLSRYLYLSDNKITSVPDS-LCRLGHLRYLNITDNRLTALP-ERFGDLASLRE 165

Query: 456 LDLSYN------------------------IASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N                        +  LPE      L  L+EL L   ++   P
Sbjct: 166 LRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE--IGGLADLRELRLMDNRVTALP 223

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             I  L +L  LDL  N L+++P+    L  LT LDL +N +  LPP L ++
Sbjct: 224 DTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAAL 275



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           + L L+ N I  + + L  L  L  LN++ N+L+ LP   G+L  L+ L +  N +  +P
Sbjct: 118 RYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLP 177

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
             IG+   L +     N+L  LP  +G   +L + +  +N +T+LP+ +    ++++LD+
Sbjct: 178 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 237

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+                        L  +P+ IG L RL  LDL  NR+  +P +++
Sbjct: 238 RNNE------------------------LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLA 273

Query: 228 GCCSLAEFYMGNN--ALSALPAELGKLSKLG 256
               L +  +  N  AL  LPA +  L + G
Sbjct: 274 ALPRLEKLDLRWNPLALDPLPAWVSSLEQRG 304



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +++ +   L++L L HN +  L   +  L  L   ++  N+L+ LP  IG L  L+ L +
Sbjct: 155 ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRL 214

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +PD IG    L + D  +N+L+ +P ++GR   L+     NN +  LP  LA 
Sbjct: 215 MDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAA 274

Query: 159 CSKMSKLDVEGNKLTV 174
             ++ KLD+  N L +
Sbjct: 275 LPRLEKLDLRWNPLAL 290


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 153/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPPTISQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG+L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL +     N + +LPE +  C  + +LDV  NKL +L +  I     L +L  S+
Sbjct: 195 SMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDE-IGDLEKLDDLTVSQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P +IG L +L  L   +N I  +  +I  C +L E Y+  N L+ +P+ LG L 
Sbjct: 254 NCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L +  N L 
Sbjct: 314 SLRTLNLDKNQLKELPPTIGGC-TSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 YL 374



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 189/396 (47%), Gaps = 29/396 (7%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N++
Sbjct: 25  LQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  +++
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +P
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPS-ISQLKQLRRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I  L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L +
Sbjct: 192 NEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTV 251

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N L+       +L +LS+L    N+++ L P IG    L ++ LT N L  + SSL N
Sbjct: 252 SQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGN 311

Query: 320 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 LK LR+  L +N+  E   T    I   T LSV    LSL    +  +P EI  
Sbjct: 312 ------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIEQLPLEIGR 357

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
              +  LD+  N +  LP  ++    L+ L LS N+
Sbjct: 358 LENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 393



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 176/385 (45%), Gaps = 48/385 (12%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENED 338
           L L++ SL+ +P +IG++  LR L +  N LRT+       P+ + LK LR   L  NE 
Sbjct: 134 LGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTV------PPSISQLKQLRRLDLGHNE- 186

Query: 339 SEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                  +DL   I+M   L    +EL ++  +L A+P  I +   + +LD+S N +  L
Sbjct: 187 ------LDDLPNEISMLENL----EELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLL 236

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+     L  L +S+N ++  P +I   L  LS LK D N + Q+             
Sbjct: 237 PDEIGDLEKLDDLTVSQNCLQVLPSSI-GRLKKLSMLKADRNAITQL------------- 282

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                        P   S   L E+YL    L E P+ +  L+ LR L+L +N L+ +P 
Sbjct: 283 ------------TPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPP 330

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
                TSL+ L L DN I  LP E+
Sbjct: 331 TIGGCTSLSVLSLRDNLIEQLPLEI 355



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K LSL    +  +PS+I     + +L+L  N + +LP E+ +C  L+ L LS N I   P
Sbjct: 63  KILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLP 122

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I + L+S++ L L++  L Q+P D                            L +L+ 
Sbjct: 123 PTI-SQLTSMTSLGLNDISLTQMPHD-------------------------IGQLRNLRS 156

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L +R   LR  P  I +L+QLR LDL  N L  +P     L +L EL +  N++ ALP  
Sbjct: 157 LEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPES 216

Query: 540 LV 541
           +V
Sbjct: 217 IV 218


>gi|391336550|ref|XP_003742642.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Metaseiulus
           occidentalis]
          Length = 1488

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 207/461 (44%), Gaps = 87/461 (18%)

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P   G    ++ +D S ++++ +P+EIG   +L +   +SN +KELP  L R   L  F 
Sbjct: 7   PIFRGSNRRVERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFT 66

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
           AS+N I  +P+D                        I +W +L EL  SKN ++ +PE +
Sbjct: 67  ASDNEIQEIPQD------------------------IGAWQLLQELDLSKNDISDIPEGL 102

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L  L  LDL QN +   P  +    +L   Y+ + AL+ALP   G LS L  L+L  N
Sbjct: 103 RHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLNDVALAALPVAFGMLSSLTILELRDN 162

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            LK       QL+ L  LDL +N +  L P IG++ +L +L L  NPL            
Sbjct: 163 SLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWLDCNPL------------ 210

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
                   SRLP +            I   +RL    K L +    L A+P+EI +   +
Sbjct: 211 --------SRLPGD------------IGKLSRL----KCLDVSESRLEALPNEICQLSSL 246

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           + L LS+N + +LP ++    +L  L + +N I   PD+ L    SL  L L +N L QV
Sbjct: 247 SDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHIPDS-LGYCESLQELILTDNELTQV 305

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           P                         P   +L  L  L + R  L+  P DI +L++L +
Sbjct: 306 P-------------------------PDIGNLTKLTNLNIDRNLLQRLPPDIGKLEKLTM 340

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L L +N L  +P    NL+SL  +D+S N +  LP  + S+
Sbjct: 341 LSLRENRLSELPLEIGNLSSLHVMDISGNRLKNLPISMASL 381



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 189/400 (47%), Gaps = 43/400 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++++  +H+N+  + E++     L  L ++ N + ELP  +  L  L+    S N I +I
Sbjct: 16  VERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDNEIQEI 75

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG+   L + D S N + ++P  L    NL     S NC+   P+ L D   ++ L 
Sbjct: 76  PQDIGAWQLLQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALY 135

Query: 167 VEGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +    L  L  +  +++S T+L EL    N L  +P++ G L  L RLDL  N I  +  
Sbjct: 136 LNDVALAALPVAFGMLSSLTIL-EL--RDNSLKNLPDSFGQLKHLERLDLGSNEIEELSP 192

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLS 283
            I    SL E ++  N LS LP ++GKLS+L  LD+  ++L+    E CQ   LS L LS
Sbjct: 193 VIGRLESLEELWLDCNPLSRLPGDIGKLSRLKCLDVSESRLEALPNEICQLSSLSDLLLS 252

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP +IGK+ TL  L +  N +  +         P  L Y  S            
Sbjct: 253 QNLLTKLPKDIGKLRTLTILKVDQNHISHI---------PDSLGYCESL----------- 292

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                           +EL L    L+ +P +I    ++T L++ RN +Q LPP++    
Sbjct: 293 ----------------QELILTDNELTQVPPDIGNLTKLTNLNIDRNLLQRLPPDIGKLE 336

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L  L L  N++ + P  I  +LSSL  + +  N L+ +P
Sbjct: 337 KLTMLSLRENRLSELPLEI-GNLSSLHVMDISGNRLKNLP 375



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 24/247 (9%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L++L L  N IE+L   +  L  L  L +  N LS LP  IG+L  LK LDV
Sbjct: 169 DSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWLDCNPLSRLPGDIGKLSRLKCLDV 228

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S + +  +P+EI   ++L     S N L +LP  +G+   L+  K   N I+ +P+ L  
Sbjct: 229 SESRLEALPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHIPDSLGY 288

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           C  + +L +  N+LT +  + I + T LT L   +NLL  +P  IG L +L  L L +NR
Sbjct: 289 CESLQELILTDNELTQVPPD-IGNLTKLTNLNIDRNLLQRLPPDIGKLEKLTMLSLRENR 347

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
                                  LS LP E+G LS L  +D+  N+LK   +    LRL 
Sbjct: 348 -----------------------LSELPLEIGNLSSLHVMDISGNRLKNLPISMASLRLK 384

Query: 279 VLDLSNN 285
            L L+ N
Sbjct: 385 ALWLAEN 391


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 30/310 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA          D++ L L++  +  L +++  L  L +LN+  N+L+ LP  I
Sbjct: 30  TYHNLTEA-----LQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI 84

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L++  N    +P++IG    L +   S NQL   P+ +G+  NL +   S N
Sbjct: 85  GKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVN 144

Query: 148 CITSLPEDLADCSKMSK-----------------------LDVEGNKLTVLSNNLIASWT 184
            +T+LP D+    K+ +                       LD+ GN+LT L    I    
Sbjct: 145 QLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE-IGELK 203

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL   KN L  +P  IG L  L  L +  N++ ++P  I    +L E Y+  N L  
Sbjct: 204 NLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKT 263

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  LDLH N+LK    E  +L+ L+VLDL NN L  LP EIG++ +L  L
Sbjct: 264 LPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVL 323

Query: 304 LLTGNPLRTL 313
            L  N L+TL
Sbjct: 324 DLRNNELKTL 333



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 152/320 (47%), Gaps = 38/320 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P E+              E  +L+ L L  N +  L  ++  L  L +L
Sbjct: 47  LDLSNKRLTTLPKEI-------------GELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  IG+L  L+ L +SFN +   P++IG    L +   S NQL  LP+ +
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDI 153

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L       N + +L +++    ++  LD+ GN+LT L    I     L EL   K
Sbjct: 154 GKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE-IGELKNLRELHLYK 212

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L +  N++ ++P  I    +L E Y+  N L  LP E+G+L 
Sbjct: 213 NQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQ 272

Query: 254 KLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLSG 289
            L  LDLH N+LK    E  +L+                        L+VLDL NN L  
Sbjct: 273 NLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKT 332

Query: 290 LPPEIGKMTTLRKLLLTGNP 309
           LP EIGK+  LRKL L   P
Sbjct: 333 LPNEIGKLKELRKLHLDDIP 352



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 38/352 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S+ +L+ LP  IGEL  L+ L++  N +  +P+EIG    L   
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +   NQ   LP+ +G+  NL +   S N +T+ P D+     + +L +  N+LT L N+ 
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L   +N L  + + IG L  L  LDL+ N++ ++P  I    +L E ++  
Sbjct: 153 IGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYK 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP ++G+L  L  L + SNQLK    E  +L+ L  L L  N L  LP EIG++ 
Sbjct: 213 NQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQ 272

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L  N L+TL         P  +  L++                       L+V 
Sbjct: 273 NLTVLDLHINELKTL---------PKEIGELQN-----------------------LTV- 299

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
              L L    L  +P EI E   +T LDL  N ++ LP E+     L+ L L
Sbjct: 300 ---LDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHL 348



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 63/346 (18%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L+L++N++ ++P+ I    +L    +  N  +ALP ++GKL  L
Sbjct: 54  LTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNL 113

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL  +  +  QL+ L  L LS N L+ LP +IGK+  L +L L  N L+TL 
Sbjct: 114 QELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLS 173

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +          YL+                        L V    L L G  L+ +P 
Sbjct: 174 KEI---------GYLKE-----------------------LQV----LDLNGNQLTTLPK 197

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI E   + +L L +N ++ LP ++    +LQ L +  N++K  P  I   L +L  L L
Sbjct: 198 EIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEI-GELQNLQELYL 256

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
             N L+ +P +   ++  L +LDL  N                        +L+  P +I
Sbjct: 257 YTNQLKTLPKE-IGELQNLTVLDLHIN------------------------ELKTLPKEI 291

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             LQ L +LDL  N L+++P+    L SLT LDL +N +  LP E+
Sbjct: 292 GELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI 337



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 115/248 (46%), Gaps = 37/248 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PN++ K                L++L L  N ++ L +++  L  L V
Sbjct: 138 ELHLSVNQLTTLPNDIGK-------------LQKLERLSLIENQLKTLSKEIGYLKELQV 184

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L+ LP  IGEL  L+ L +  N +  +P++IG    L      SNQLK LP  
Sbjct: 185 LDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKE 244

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +     N + +LP+++ +   ++ LD+  N+L  L                 
Sbjct: 245 IGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTL----------------- 287

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L  L  LDL  N + ++P  I    SL    + NN L  LP E+GKL
Sbjct: 288 -------PKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKL 340

Query: 253 SKLGTLDL 260
            +L  L L
Sbjct: 341 KELRKLHL 348



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 42/306 (13%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN-NSLSGLPPEIG 295
           + N  L+ LP E+G+L  L  L+L+ NQL     E  +L+   L   + N  + LP +IG
Sbjct: 49  LSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIG 108

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  L++L L+ N L T  + +        L+ LR                         
Sbjct: 109 KLKNLQELHLSFNQLTTFPNDI------GQLQNLR------------------------- 137

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                EL L    L+ +P++I +  ++ +L L  N ++ L  E+     LQ L L+ N++
Sbjct: 138 -----ELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQL 192

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P  I   L +L  L L  N L+ +P+D   ++  LQ+L +  N + +LP+      L
Sbjct: 193 TTLPKEI-GELKNLRELHLYKNQLKTLPND-IGELKNLQVLHIGSNQLKTLPK--EIGEL 248

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQELYL   QL+  P +I  LQ L +LDL  N L+++P+    L +LT LDL +N + 
Sbjct: 249 QNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELK 308

Query: 535 ALPPEL 540
            LP E+
Sbjct: 309 TLPKEI 314


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLKNLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG    L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 337



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 155/333 (46%), Gaps = 42/333 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +        LK L+
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI------GQLKNLQ 166

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                         +L+L+   L A+P+EI +   + +L LS N
Sbjct: 167 ------------------------------KLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           L  +P+    L +L  L L++N +S+   E + 
Sbjct: 313 LTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQ 345



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 147/307 (47%), Gaps = 23/307 (7%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                    P  +  L++ +L  + ++E +   ++ I    +L      L L    L+ +
Sbjct: 225 ---------PKEIGQLQNLKLLYSVNNELTILPQE-IGQLQKLQY----LYLSHNQLTTL 270

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   + +L L+ N +  LP E+    +LQT I   N++   P  I   L +L  L
Sbjct: 271 PKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI-GQLQNLQWL 329

Query: 433 KLDNNPL 439
           KL+NN L
Sbjct: 330 KLNNNQL 336



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 528 LSDNNISALPPEL 540
           L DN ++ LP E+
Sbjct: 216 LGDNQLTILPKEI 228


>gi|301103829|ref|XP_002901000.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101338|gb|EEY59390.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1178

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 226/501 (45%), Gaps = 64/501 (12%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           ED    P+L +  +   KLS   + I  L  LKSL +S N + +IP  I     L + D 
Sbjct: 215 EDAEQAPILNMSGLDAWKLS---SRIWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDV 271

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S NQL  LPS L    +L+   AS+N I +    L    ++  LD+              
Sbjct: 272 SFNQLTRLPSCLQTTTSLTSICASHNLIQTFSPKLWKLREIRYLDL-------------- 317

Query: 182 SWTMLTELIASKNLLNGMPET------IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
           S+  L EL   +  L  + ET      +G L  L  L L  N+++ +P SI  C  L   
Sbjct: 318 SYNRLKELPFVEGDLKLLRETGEWQVGVGLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLL 377

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
            + NN LS+L  E+  L+ L  + LH N L E       L  L  LDL++NSL  LP  I
Sbjct: 378 DISNNQLSSLSDEISALTSLHRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTLPESI 437

Query: 295 GKMTTLRKLLLTGNPLRTLRSS-----------LVNGPTPALLKYLRSRLPENEDSEAST 343
           G +  L+ L L  N LR L +            L N P    L+     LP  E   AS+
Sbjct: 438 GMLRNLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASS 497

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
               ++T A          SL+ +  S +           KL L+ N++QE P  +   A
Sbjct: 498 C--GIVTFA----------SLDFLKDSPVE----------KLRLNHNALQEFPLLIGHAA 535

Query: 404 ---SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              +LQ L LS + +   P A+L   S L    L +N LR +P++    +  L++L+LS 
Sbjct: 536 MQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPTE-IGHLRRLEVLNLSS 594

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           N + +LP+    + LP L++L     QL + P  +  L QL  L++S N L+S+P     
Sbjct: 595 NTLQALPDE--LTQLPRLRQLKCDHNQLGQLPLRLGNLVQLTKLNVSFNRLRSMPTSLME 652

Query: 520 LTSLTELDLSDNNISALPPEL 540
           +T L  L  SDN ++  PP L
Sbjct: 653 MTQLQSLYASDNLMATPPPAL 673



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 222/503 (44%), Gaps = 88/503 (17%)

Query: 39  DKW------WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           D W      W    L+ L+L+ N + ++   +++L  L  L+VS N+L+ LP+ +     
Sbjct: 229 DAWKLSSRIWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTS 288

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP----------------SSLGRC 136
           L S+  S N I     ++     +   D S N+LKELP                  +G  
Sbjct: 289 LTSICASHNLIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGEWQVGVGLL 348

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            +L   + SNN +  +P+ +  CS ++ LD+  N+L+ LS+  I++ T L  +I   N L
Sbjct: 349 EHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDE-ISALTSLHRMILHHNAL 407

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + +PE IG+L  L  LDL  N ++++P SI    +L    + +N L  LP E G LS+L 
Sbjct: 408 HELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLR 467

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP----EIGKMTTLRKLLLTGNPLRT 312
            LDL +N  K   +EA    L  ++  + S  G+      +  K + + KL L  N L+ 
Sbjct: 468 HLDLDNNP-KLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSPVEKLRLNHNALQE 526

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                     P L+ +                          +  T +EL L   +L+ +
Sbjct: 527 F---------PLLIGH------------------------AAMQDTLQELDLSDSHLTQV 553

Query: 373 P-SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           P + +     +   DLS NS++ LP E+     L+ L LS N ++  PD  LT L  L  
Sbjct: 554 PLAVLLYCSHLQYFDLSSNSLRVLPTEIGHLRRLEVLNLSSNTLQALPDE-LTQLPRLRQ 612

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           LK D+N L Q+P     ++  L  L++S+N                        +LR  P
Sbjct: 613 LKCDHNQLGQLPL-RLGNLVQLTKLNVSFN------------------------RLRSMP 647

Query: 492 TDILRLQQLRILDLSQNSLQSIP 514
           T ++ + QL+ L  S N + + P
Sbjct: 648 TSLMEMTQLQSLYASDNLMATPP 670



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 34/338 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPL 69
           L+LS   L+++P  V  +     E  +W   V     LQ L L++N + ++ + +     
Sbjct: 315 LDLSYNRLKELPF-VEGDLKLLRETGEWQVGVGLLEHLQVLRLSNNQLVEVPKSIEKCSH 373

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT+L++S+N+LS L   I  L  L  + +  N++ ++P+ IG+   L + D + N L  L
Sbjct: 374 LTLLDISNNQLSSLSDEISALTSLHRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTL 433

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN-KLTVLSNNL--------- 179
           P S+G   NL      +N +  LP +    S++  LD++ N KL  L             
Sbjct: 434 PESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNNPKLITLEAFFRHLPSVEFL 493

Query: 180 ---------IASWTMLTE-----LIASKNLLNGMPETIGSLS---RLIRLDLHQNRILSI 222
                     AS   L +     L  + N L   P  IG  +    L  LDL  + +  +
Sbjct: 494 SASSCGIVTFASLDFLKDSPVEKLRLNHNALQEFPLLIGHAAMQDTLQELDLSDSHLTQV 553

Query: 223 PSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           P ++   CS  +++ + +N+L  LP E+G L +L  L+L SN L+    E  QL RL  L
Sbjct: 554 PLAVLLYCSHLQYFDLSSNSLRVLPTEIGHLRRLEVLNLSSNTLQALPDELTQLPRLRQL 613

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
              +N L  LP  +G +  L KL ++ N LR++ +SL+
Sbjct: 614 KCDHNQLGQLPLRLGNLVQLTKLNVSFNRLRSMPTSLM 651



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 168/412 (40%), Gaps = 93/412 (22%)

Query: 183 WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           W +  L  L+ S+N L  +P  I  L  L  LD+  N++  +PS +    SL      +N
Sbjct: 238 WNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTSLTSICASHN 297

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-----------------SVLDLS 283
            +     +L KL ++  LDL  N+LKE       L+L                  VL LS
Sbjct: 298 LIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGEWQVGVGLLEHLQVLRLS 357

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  +P  I K + L  L ++ N L +L                              
Sbjct: 358 NNQLVEVPKSIEKCSHLTLLDISNNQLSSL------------------------------ 387

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              D I+  T L      + L    L  +P  I     + +LDL+ NS+  LP  +    
Sbjct: 388 --SDEISALTSL----HRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLR 441

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP--------LRQVPS----------- 444
           +L+TL L  N+++  P+    SLS L  L LDNNP         R +PS           
Sbjct: 442 NLKTLTLVSNQLRLLPNE-FGSLSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGI 500

Query: 445 ------DGFKDIPMLQILDLSYNIASLPENPPFSSLPH------LQELYLRRMQLREAPT 492
                 D  KD P ++ L L++N  +L E P    + H      LQEL L    L + P 
Sbjct: 501 VTFASLDFLKDSP-VEKLRLNHN--ALQEFPLL--IGHAAMQDTLQELDLSDSHLTQVPL 555

Query: 493 DIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +L     L+  DLS NSL+ +P    +L  L  L+LS N + ALP EL  +
Sbjct: 556 AVLLYCSHLQYFDLSSNSLRVLPTEIGHLRRLEVLNLSSNTLQALPDELTQL 607


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 139/266 (52%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N   +  + +  L  L VL++  N LS +P+ +G L  ++ L+++ N +  +
Sbjct: 110 LTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSV 169

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-KASNNCITSLPEDLADCSKMSKL 165
           P EIG+ + L   D   N+L ++P SLG    LS +   S+N ITS+P+ L     +  L
Sbjct: 170 PAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYL 229

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L          L EL    N L G+P +IG+L  L    L  NR+  +P  
Sbjct: 230 NITDNRLTALPER-FGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE 288

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I G   L E  + +N ++ALP  +G L +L  LDL +N+L+       +L RL+ LDL N
Sbjct: 289 IGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRN 348

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L  LPP +  +  L KL L  NPL
Sbjct: 349 NRLHELPPTLAALPRLEKLDLRWNPL 374



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 165/371 (44%), Gaps = 49/371 (13%)

Query: 73  LNVSHNKLSELPAA---IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L+     +  LP A   I  L  L +LD+SFN +  +P ++G    L +    SNQ    
Sbjct: 64  LSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRF 123

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++     L       N ++++P  L    ++  L++ GN+L+                
Sbjct: 124 PDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLS---------------- 167

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAE 248
                    +P  IG+LSRL  LDL  N +  IP S+     L+ + Y+ +N ++++P  
Sbjct: 168 --------SVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDS 219

Query: 249 LGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           L +L  L  L++  N+L    E   +   LR   L L +N L+GLP  IG +  LR+  L
Sbjct: 220 LCRLGHLRYLNITDNRLTALPERFGDLASLR--ELRLYHNRLTGLPRSIGALRELREAHL 277

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
            GN L  L   +        L  LR  RL +N  +    T   L+ + TRL + + E   
Sbjct: 278 MGNRLTGLPEEIGG------LADLRELRLMDNRVTALPDTIGGLVRL-TRLDLRNNE--- 327

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP-DAIL 423
               L A+P  I     +T LDL  N + ELPP L++   L+ L L  N +   P  A +
Sbjct: 328 ----LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWV 383

Query: 424 TSLSSLSCLKL 434
           +SL    C+ L
Sbjct: 384 SSLEQRGCVVL 394



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 155/343 (45%), Gaps = 24/343 (6%)

Query: 207 SRLIRLDLHQNRILSIPSS---ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            +++ L   +  + S+P +   I+    LA   +  N L  LPA+LG+L +L  L L SN
Sbjct: 59  GKVVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSN 118

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           Q   +      L  L VL L  N LS +P  +G +  +R L L GN     R S V    
Sbjct: 119 QFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGN-----RLSSVPAEI 173

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            AL +     L  NE ++   +  D+  +       S+ L L    ++++P  +   G +
Sbjct: 174 GALSRLHTLDLGHNELTDIPPSLGDVTGL-------SRYLYLSDNKITSVPDSLCRLGHL 226

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L+++ N +  LP      ASL+ L L  N++   P +I  +L  L    L  N L  +
Sbjct: 227 RYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI-GALRELREAHLMGNRLTGL 285

Query: 443 PSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           P +  G  D+  L+++D    + +LP+      L  L  L LR  +LR  P  I RL +L
Sbjct: 286 PEEIGGLADLRELRLMD--NRVTALPDT--IGGLVRLTRLDLRNNELRAVPDAIGRLDRL 341

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP-PELVS 542
             LDL  N L  +P     L  L +LDL  N ++  P P  VS
Sbjct: 342 THLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVS 384



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 139/320 (43%), Gaps = 43/320 (13%)

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GK+  L   +     L E   E  +L  L+ LDLS N L  LP ++G++  L +L L  N
Sbjct: 59  GKVVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSN 118

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                  +++      +L   R+ L  N  S     +E             + L+L G  
Sbjct: 119 QFSRFPDAVLGLTGLQVLSLYRNGL-SNVPSGLGGLRE------------IRVLNLAGNR 165

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QTLILSRNKIKDWPDAILTSLS 427
           LS++P+EI     +  LDL  N + ++PP L     L + L LS NKI   PD+ L  L 
Sbjct: 166 LSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDS-LCRLG 224

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN------------------------IA 463
            L  L + +N L  +P + F D+  L+ L L +N                        + 
Sbjct: 225 HLRYLNITDNRLTALP-ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLT 283

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LPE      L  L+EL L   ++   P  I  L +L  LDL  N L+++P+    L  L
Sbjct: 284 GLPEE--IGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRL 341

Query: 524 TELDLSDNNISALPPELVSV 543
           T LDL +N +  LPP L ++
Sbjct: 342 THLDLRNNRLHELPPTLAAL 361



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           + L L+ N I  + + L  L  L  LN++ N+L+ LP   G+L  L+ L +  N +  +P
Sbjct: 204 RYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLP 263

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
             IG+   L +     N+L  LP  +G   +L + +  +N +T+LP+ +    ++++LD+
Sbjct: 264 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 323

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+                        L  +P+ IG L RL  LDL  NR+  +P +++
Sbjct: 324 RNNE------------------------LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLA 359

Query: 228 GCCSLAEFYMGNN--ALSALPAELGKLSKLG 256
               L +  +  N  AL  LPA +  L + G
Sbjct: 360 ALPRLEKLDLRWNPLALDPLPAWVSSLEQRG 390



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +++ +   L++L L HN +  L   +  L  L   ++  N+L+ LP  IG L  L+ L +
Sbjct: 241 ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRL 300

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +PD IG    L + D  +N+L+ +P ++GR   L+     NN +  LP  LA 
Sbjct: 301 MDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAA 360

Query: 159 CSKMSKLDVEGNKLTV 174
             ++ KLD+  N L +
Sbjct: 361 LPRLEKLDLRWNPLAL 376


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 21/347 (6%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG    L +L L  N+I  IP S+     L E YMG NAL+A+P E+GKL 
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLK 191

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  L+L  N++ +     C L +L+ L +  N+L+ +P EIGK+ +++ L L  N +  
Sbjct: 192 NMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEK 251

Query: 313 LRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           +  SL      AL      +L E N    A T   D IT    + +    L L   N++ 
Sbjct: 252 IPDSLC-----AL-----EQLTELNVRYNALTAIPDEITKLKSMKI----LDLSSNNIAK 297

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           IP  +    ++T+L +  +++  +P E++   S++ L LS +K    PD++ T L  L+ 
Sbjct: 298 IPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCT-LEQLTK 356

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREA 490
           L +  N L  +P D    +  L+IL+L++ NIA +P++    +L  L EL +    L   
Sbjct: 357 LNMHYNALTAIP-DEITKLKSLKILNLNHNNIAKIPDS--LCALEQLTELNMVSNALTAI 413

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           P +I +L+ ++ L+LS N +  IP+    L  LTELD+  N ++++P
Sbjct: 414 PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIP 460



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 175/381 (45%), Gaps = 61/381 (16%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  E  +LQKL L+ N I K+ + L  L  LT L + +N L+ +P  IG+L  +  L+++
Sbjct: 140 KIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLT 199

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           FN I KIPD + +   L +     N L  +P  +G+  ++   K +NN I  +P+ L   
Sbjct: 200 FNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCAL 259

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++++L+V  N LT                         +P+ I  L  +  LDL  N I
Sbjct: 260 EQLTELNVRYNALT------------------------AIPDEITKLKSMKILDLSSNNI 295

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP S+     L E YMG++AL+A+P E+ KL  +  LDL  ++  +     C L +L+
Sbjct: 296 AKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLT 355

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L++  N+L+ +P EI K+ +L+ L L  N +  +  SL      AL             
Sbjct: 356 KLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLC-----AL------------- 397

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                  E L            EL++    L+AIP EI +   +  L+LS N I ++P  
Sbjct: 398 -------EQLT-----------ELNMVSNALTAIPDEISKLKSMKTLNLSFNKIAKIPDS 439

Query: 399 LSSCASLQTLILSRNKIKDWP 419
           L +   L  L +  N +   P
Sbjct: 440 LCALEQLTELDMMSNALTSIP 460



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 160/307 (52%), Gaps = 19/307 (6%)

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
           Y  NN L+ +P ++G+  +L  L L SN++ +     C L +L+ L +  N+L+ +P EI
Sbjct: 128 YTQNNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEI 187

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           GK+  +  L LT N +  +  SL      AL +     +  N    A T   D I     
Sbjct: 188 GKLKNMNILNLTFNKIAKIPDSLC-----ALEQLTELYMEYN----ALTAIPDEIGKLKS 238

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           + +    L L   N+  IP  +    ++T+L++  N++  +P E++   S++ L LS N 
Sbjct: 239 MKI----LKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNN 294

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           I   PD+ L +L  L+ L + ++ L  +P D    +  ++ILDLS++  A +P++    +
Sbjct: 295 IAKIPDS-LCALEQLTELYMGSDALTAIP-DEITKLKSMKILDLSFSKFAKIPDS--LCT 350

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L +L +    L   P +I +L+ L+IL+L+ N++  IP+    L  LTEL++  N +
Sbjct: 351 LEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNAL 410

Query: 534 SALPPEL 540
           +A+P E+
Sbjct: 411 TAIPDEI 417



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 18/261 (6%)

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ +P +IG+   L+KL L+ N +  +  SL      AL +     +  N    A T
Sbjct: 131 NNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLC-----ALEQLTELYMGYN----ALT 181

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              D I     +++    L+L    ++ IP  +    ++T+L +  N++  +P E+    
Sbjct: 182 AIPDEIGKLKNMNI----LNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLK 237

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           S++ L L+ N I+  PD+ L +L  L+ L +  N L  +P D    +  ++ILDLS N I
Sbjct: 238 SMKILKLNNNNIEKIPDS-LCALEQLTELNVRYNALTAIP-DEITKLKSMKILDLSSNNI 295

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
           A +P++    +L  L ELY+    L   P +I +L+ ++ILDLS +    IP+    L  
Sbjct: 296 AKIPDS--LCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQ 353

Query: 523 LTELDLSDNNISALPPELVSV 543
           LT+L++  N ++A+P E+  +
Sbjct: 354 LTKLNMHYNALTAIPDEITKL 374



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 32/266 (12%)

Query: 14  LNLSNRSLRDVPN---------EVYKNFDE-AGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           LNL+   +  +P+         E+Y  ++      D+  +   ++ L L +NNIEK+ + 
Sbjct: 196 LNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDS 255

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  L  LT LNV +N L+ +P  I +L  +K LD+S N+I KIPD + +   L +    S
Sbjct: 256 LCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGS 315

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL-------- 175
           + L  +P  + +  ++     S +    +P+ L    +++KL++  N LT +        
Sbjct: 316 DALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLK 375

Query: 176 --------SNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
                    NN+      + +   LTEL    N L  +P+ I  L  +  L+L  N+I  
Sbjct: 376 SLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKSMKTLNLSFNKIAK 435

Query: 222 IPSSISGCCSLAEFYMGNNALSALPA 247
           IP S+     L E  M +NAL+++P+
Sbjct: 436 IPDSLCALEQLTELDMMSNALTSIPS 461


>gi|348578535|ref|XP_003475038.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cavia porcellus]
          Length = 871

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 231/511 (45%), Gaps = 57/511 (11%)

Query: 49  KLILAHNNIEKL---KEDLRNLPL--------LTVLNVSHNKLSELPAAIGELHMLKSLD 97
           K IL H NI +L      + N P         L +LNVS NKL  +P  +  L  L+ LD
Sbjct: 240 KEILHHENIRQLFLNDNYIENFPSPGVGSLRNLEILNVSKNKLRHIPDGLPNLQNLRILD 299

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           + +N +   P  +     L+  +   N +  LP  +    NL      +N +T L  ++ 
Sbjct: 300 MEYNKLTIFPKALCFLPKLISLNLVGNMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIF 359

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             SK+ +L +  NKL V+S   I ++  L  LI  KNLL  +PE I     L  L L  N
Sbjct: 360 QLSKIKELKLADNKLEVISPK-IENFKELRILILDKNLLKNIPERISYCVMLECLSLSDN 418

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           +++ +P +I    +L + ++  N++  +  ++  L+ + +L+   N +K   +E    R 
Sbjct: 419 KLIDLPKNIYKLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKNVPIEIKNCRK 478

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ ++L+ N +   P  +  + +L  L   GN +                    S++P  
Sbjct: 479 LTKVELNYNKILQFPVGLCALDSLYYLSFNGNSI--------------------SQIP-- 516

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             ++ S +K+ L             L L    L      +     +  L+L +N I+++P
Sbjct: 517 --ADVSFSKQLL------------HLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIP 562

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
           P +S+  SL  LIL  NK + +P  + T L +L  L L  N L+ +PS+  +++  +Q L
Sbjct: 563 PSISNMISLHVLILCSNKFEIFPKELCT-LENLQVLDLSENQLQTIPSE-IRNLKGVQKL 620

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRR---MQLREAPTDILRLQQLRILDLSQNSLQS 512
           + S N     P       L  L+EL + +    +L   P ++  + QL+ LD+S N+++ 
Sbjct: 621 NFSSNQFTRFP--TELCQLQSLEELDISQANGTKLTRLPEELSNMTQLKKLDISNNAIRE 678

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           IP     L SL      +N IS LPP  +++
Sbjct: 679 IPTNIGELRSLVSFYACNNQISYLPPSFLTL 709



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 212/493 (43%), Gaps = 67/493 (13%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N I  L +++R L  L +L + HNKL+ L   I +L  +K L ++ N +  I  +I 
Sbjct: 323 LVGNMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIE 382

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L       N LK +P  +  C+ L     S+N +  LP+++     + KL V  N 
Sbjct: 383 NFKELRILILDKNLLKNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLRKLHVNRNS 442

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  ++ + I+  T +  L  S N++  +P  I +  +L +++L+ N+IL  P  +    S
Sbjct: 443 IVGITED-ISHLTNICSLEFSGNMIKNVPIEIKNCRKLTKVELNYNKILQFPVGLCALDS 501

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L       N++S +PA++    +L  L+L+ N+L  +    C L  L  L+L  N +  +
Sbjct: 502 LYYLSFNGNSISQIPADVSFSKQLLHLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKI 561

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP I  M +L  L+L  N        L                          T E+L  
Sbjct: 562 PPSISNMISLHVLILCSNKFEIFPKELC-------------------------TLENL-- 594

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
                    + L L    L  IPSEI     + KL+ S N     P EL    SL+ L +
Sbjct: 595 ---------QVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFTRFPTELCQLQSLEELDI 645

Query: 411 SR---NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           S+    K+   P+  L++++ L  L + NN +R++P++                      
Sbjct: 646 SQANGTKLTRLPEE-LSNMTQLKKLDISNNAIREIPTN---------------------- 682

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L  L   Y    Q+   P   L L++L+ L+LS N+L ++P    NL SL E+ 
Sbjct: 683 ---IGELRSLVSFYACNNQISYLPPSFLTLKELQQLNLSGNNLTALPSAIHNLVSLKEIK 739

Query: 528 LSDNNISALPPEL 540
             DN +   P E+
Sbjct: 740 FDDNPLLRPPMEI 752



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 17/405 (4%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   +++L LA N +E +   + N   L +L +  N L  +P  I    ML+ L +S N
Sbjct: 359 FQLSKIKELKLADNKLEVISPKIENFKELRILILDKNLLKNIPERISYCVMLECLSLSDN 418

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            ++ +P  I     L K   + N +  +   +    N+   + S N I ++P ++ +C K
Sbjct: 419 KLIDLPKNIYKLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKNVPIEIKNCRK 478

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++K+++  NK+      L A    L  L  + N ++ +P  +    +L+ L+L++N++L 
Sbjct: 479 LTKVELNYNKILQFPVGLCA-LDSLYYLSFNGNSISQIPADVSFSKQLLHLELNENKLLV 537

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
               +    +L    +G N +  +P  +  +  L  L L SN+ + +  E C L  L VL
Sbjct: 538 FADHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVLILCSNKFEIFPKELCTLENLQVL 597

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DLS N L  +P EI  +  ++KL  + N              P  L  L+S L E + S+
Sbjct: 598 DLSENQLQTIPSEIRNLKGVQKLNFSSNQFTRF---------PTELCQLQS-LEELDISQ 647

Query: 341 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           A+ TK  L  +   LS  +  K+L +    +  IP+ I E   +       N I  LPP 
Sbjct: 648 ANGTK--LTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLVSFYACNNQISYLPPS 705

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             +   LQ L LS N +   P AI  +L SL  +K D+NPL + P
Sbjct: 706 FLTLKELQQLNLSGNNLTALPSAI-HNLVSLKEIKFDDNPLLRPP 749



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 201/436 (46%), Gaps = 30/436 (6%)

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +    NL     S+N I+ +P+++     + +L +  N +    +  + S 
Sbjct: 210 NELSSLPHEILLLNNLRILDVSHNQISHMPKEILHHENIRQLFLNDNYIENFPSPGVGSL 269

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  SKN L  +P+ + +L  L  LD+  N++   P ++     L    +  N + 
Sbjct: 270 RNLEILNVSKNKLRHIPDGLPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVGNMIG 329

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +LP E+ +L  L  L L  N+L    VE  QL ++  L L++N L  + P+I     LR 
Sbjct: 330 SLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELRI 389

Query: 303 LLLTGNPLRTL----------------RSSLVNGPTPAL-LKYLRSRLPENEDSEASTTK 345
           L+L  N L+ +                 + L++ P     LK LR +L  N +S    T 
Sbjct: 390 LILDKNLLKNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLR-KLHVNRNSIVGIT- 447

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           ED+  +    S     L   G  +  +P EI    ++TK++L+ N I + P  L +  SL
Sbjct: 448 EDISHLTNICS-----LEFSGNMIKNVPIEIKNCRKLTKVELNYNKILQFPVGLCALDSL 502

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
             L  + N I   P  +  S   L  L+L+ N L  V +D    +  L+ L+L  N I  
Sbjct: 503 YYLSFNGNSISQIPADVSFS-KQLLHLELNENKLL-VFADHLCSLMNLKFLNLGKNQIEK 560

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +P  P  S++  L  L L   +    P ++  L+ L++LDLS+N LQ+IP   +NL  + 
Sbjct: 561 IP--PSISNMISLHVLILCSNKFEIFPKELCTLENLQVLDLSENQLQTIPSEIRNLKGVQ 618

Query: 525 ELDLSDNNISALPPEL 540
           +L+ S N  +  P EL
Sbjct: 619 KLNFSSNQFTRFPTEL 634


>gi|60327198|gb|AAX19022.1| Hcr2-p1.2 [Solanum pimpinellifolium]
          Length = 991

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 256/537 (47%), Gaps = 60/537 (11%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L++NNI   +  ++ NL  L  L+++ N++S  +P  IG L  L+ + + FN+ +
Sbjct: 97  LENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRI-FNNHL 155

Query: 105 K--IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG   +L K     N L   +P+SLG   NLS     NN ++ S+PE++    
Sbjct: 156 NGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLR 215

Query: 161 KMSKLDVEGNKLT-----------------VLSNNL-------IASWTMLTELIASKNLL 196
            ++KL +  N L+                 +  N L       I     LT+L    N L
Sbjct: 216 SLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFL 275

Query: 197 NG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           +G +P ++G+L+ L RLDL+ N++  SIP  I    SL    +G NAL+  +PA LG L+
Sbjct: 276 SGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLN 335

Query: 254 KLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
            L  L L++NQL     E    LR L+ L L NN LSG +P  +GK+     + L  N L
Sbjct: 336 NLFMLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQL 395

Query: 311 RTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
                   +G  P  + YLRS     L EN  + +       +     L + + +LS   
Sbjct: 396 --------SGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLS--- 444

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
               +IP EI     +T LDL  N++   +P  L +  +L  L L  N++       +  
Sbjct: 445 ---GSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGY 501

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSLPHLQELYLRR 484
           LSSL+ L L NN L  +    F ++  LQ L L+ N   + E P F  +L  L+ LY+ R
Sbjct: 502 LSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDN-NLIGEIPSFVCNLTSLELLYMPR 560

Query: 485 MQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPPE 539
             L+ + P  +  +  L +L +S NS    +P    NLTSL  LD   NN+    P+
Sbjct: 561 NNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQ 617



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 254/561 (45%), Gaps = 86/561 (15%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI- 103
           LQ + + +N++   + E++  L  LT L++  N LS  +PA++G L+ L SL +  N + 
Sbjct: 145 LQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLS 204

Query: 104 MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT------------ 150
             IP+EIG   +L K     N L   + +SLG   NLS     +N ++            
Sbjct: 205 GSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRS 264

Query: 151 -------------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
                        S+P  L + + +S+LD+  NKL+      I     LT L   +N LN
Sbjct: 265 LTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALN 324

Query: 198 G-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +P ++G+L+ L  L L+ N++  SIP  I    SL +  +GNN LS  +PA LGKL+ 
Sbjct: 325 GSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNN 384

Query: 255 LGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
             ++ L +NQL     E    LR L+ LDLS N+L+G +P  +G +  L  L L  N L 
Sbjct: 385 FFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQL- 443

Query: 312 TLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
                  +G  P  + YLRS     L EN  + +       +   +RL + + +LS    
Sbjct: 444 -------SGSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLS---- 492

Query: 368 NLSAIPSEIWEAGEITKLDLSRNS-------------------------IQELPPELSSC 402
              +IP EI     +T L L  NS                         I E+P  + + 
Sbjct: 493 --GSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNL 550

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYN 461
            SL+ L + RN +K      L ++S L  L + +N    ++PS    ++  L+ILD   N
Sbjct: 551 TSLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSS-ISNLTSLKILDFGRN 609

Query: 462 I--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGF 517
               ++P+   F ++  LQ   ++  +L    PT+      L  L+L  N L+  IP   
Sbjct: 610 NLEGAIPQ--CFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSL 667

Query: 518 KNLTSLTELDLSDNNISALPP 538
            N   L  LDL DN ++   P
Sbjct: 668 DNCKKLQVLDLGDNQLNDTFP 688



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 228/491 (46%), Gaps = 37/491 (7%)

Query: 70  LTVLNVSH-NKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK 127
           LT+ N S    L   P +   L  L++LD+S N+I + IP EIG+ T LV  D ++NQ+ 
Sbjct: 75  LTITNASVIGTLYAFPFS--SLPFLENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQIS 132

Query: 128 -ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             +P  +G    L   +  NN +   +PE++     ++KL +  N L+      + +   
Sbjct: 133 GTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNN 192

Query: 186 LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 243
           L+ L    N L+G +PE IG L  L +L L  N +  SI +S+    +L+  Y+ +N LS
Sbjct: 193 LSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLS 252

Query: 244 A-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTT 299
             +P E+G L  L  L L  N L      +      LS LDL NN LSG +P EIG + +
Sbjct: 253 GSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRS 312

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRL 355
           L  L L  N L        NG  PA L  L +     L  N+ S +   +   +   T+L
Sbjct: 313 LTYLDLGENAL--------NGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTKL 364

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNK 414
           S+ +  LS       +IP+ + +      + L  N +   +P E+    SL  L LS N 
Sbjct: 365 SLGNNFLS------GSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENA 418

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFS 472
           +     A L +L++L  L L NN L     +    +  L  LDL  N    S+P +    
Sbjct: 419 LNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPAS--LG 476

Query: 473 SLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSD 530
           +L +L  LYL   QL  + P +I  L  L  L L  NSL   IP  F N+ +L  L L+D
Sbjct: 477 NLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLND 536

Query: 531 NNISALPPELV 541
           NN+    P  V
Sbjct: 537 NNLIGEIPSFV 547



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 217/486 (44%), Gaps = 58/486 (11%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++  N L   +PA++G L+ L  L +  N +
Sbjct: 432 NLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQL 491

Query: 104 -MKIPDEIGSATALVKFDCSSNQLKEL-PSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG  ++L      +N L  L P+S G   NL   F   NN I  +P  + + +
Sbjct: 492 SGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLT 551

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  N L       + + + L  L  S N  +G +P +I +L+ L  LD  +N +
Sbjct: 552 SLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNL 611

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQ 274
             +IP       SL  F M NN LS  LP        L +L+LH N+L++   + ++ C+
Sbjct: 612 EGAIPQCFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCK 671

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSR 332
            +L VLDL +N L+   P  +G +  LR L LT N L   +RSS V    P L     SR
Sbjct: 672 -KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGVEIMFPDLRIIDLSR 730

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
              ++D   S   E L  M T +  T +E S E    S +         +TK        
Sbjct: 731 NAFSQDLPTSLF-EHLKGMRT-VDKTMEEPSYEIYYDSVVV--------VTK-------- 772

Query: 393 QELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
             L  E+    SL T+I LS NK +    ++L  L ++  L + +N L+         + 
Sbjct: 773 -GLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLS 831

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +L+ LDLS+N  S                        E P  +  L  L  L+LS N LQ
Sbjct: 832 ILESLDLSFNQLS-----------------------GEIPQQLASLTFLEFLNLSHNYLQ 868

Query: 512 S-IPEG 516
             IP+G
Sbjct: 869 GCIPQG 874


>gi|242091834|ref|XP_002436407.1| hypothetical protein SORBIDRAFT_10g001970 [Sorghum bicolor]
 gi|241914630|gb|EER87774.1| hypothetical protein SORBIDRAFT_10g001970 [Sorghum bicolor]
          Length = 978

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 225/476 (47%), Gaps = 50/476 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLN 138
            E+  AIG+L  L+ +D+  N +  +IPDEIG   +L   D S N L  ++P S+ +   
Sbjct: 83  GEISPAIGQLKSLQFVDLKLNKLTGQIPDEIGDCVSLKYLDLSGNLLYGDIPFSISKLKQ 142

Query: 139 LSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L D    NN +T  +P  L+    +  LD+  NKLT     LI    +L  L    N L 
Sbjct: 143 LEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQYLGLRGNSLT 202

Query: 198 G-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +   +  L+ L   D+  N +  +IP  I  C S     +  N +S  +P  +G L +
Sbjct: 203 GTLSPDMCQLTGLWYFDVRGNNLTGTIPEGIGNCTSFEILDISYNQISGEIPYNIGYL-Q 261

Query: 255 LGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           + TL L  N+L     E   L   L+VLDLS N L G +PP +G ++   KL L GN L 
Sbjct: 262 VATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKL- 320

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  P  L  + S+L                   + L +   EL      +  
Sbjct: 321 -------TGHIPPELGNM-SKL-------------------SYLQLNDNEL------VGT 347

Query: 372 IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP+E+ +  E+ +L+L+ N+++  +P  +SSC++L    +  N++     A    L SL+
Sbjct: 348 IPAELGKLTELFELNLANNNLEGHIPANISSCSALNKFNVYGNRLNGSIPAGFQELESLT 407

Query: 431 CLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR- 488
            L L +N  + Q+PS+    I  L  LDLSYN  S P  P    L HL EL L +  L  
Sbjct: 408 YLNLSSNNFKGQIPSE-LGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLTG 466

Query: 489 EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNN-ISALPPELVS 542
             P +   L+ ++++D+S N+L   +PE    L +L  L L++NN +  +P +L +
Sbjct: 467 SVPAEFGNLRSVQVIDISSNNLTGYLPEELGQLQNLDSLILNNNNLVGEIPAQLAN 522



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 187/440 (42%), Gaps = 65/440 (14%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ LIL +N +   +   L  +P L  L+++ NKL+ ++P  I    +L+ L +  NS+ 
Sbjct: 143 LEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQYLGLRGNSLT 202

Query: 105 KI--PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
               PD +   T L  FD   N                      N   ++PE + +C+  
Sbjct: 203 GTLSPD-MCQLTGLWYFDVRGN----------------------NLTGTIPEGIGNCTSF 239

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS- 221
             LD+  N+++      I    + T  +    L+  +PE IG +  L  LDL +N ++  
Sbjct: 240 EILDISYNQISGEIPYNIGYLQVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGP 299

Query: 222 IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC-VEACQL-RLS 278
           IP  +       + Y+  N L+  +P ELG +SKL  L L+ N+L      E  +L  L 
Sbjct: 300 IPPILGNLSYTGKLYLHGNKLTGHIPPELGNMSKLSYLQLNDNELVGTIPAELGKLTELF 359

Query: 279 VLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RL 333
            L+L+NN+L G +P  I   + L K  + GN L        NG  PA  + L S     L
Sbjct: 360 ELNLANNNLEGHIPANISSCSALNKFNVYGNRL--------NGSIPAGFQELESLTYLNL 411

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELS------------LEGMNLS------AIPSE 375
             N       ++   I     L ++  E S            L  +NLS      ++P+E
Sbjct: 412 SSNNFKGQIPSELGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLTGSVPAE 471

Query: 376 IWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 +  +D+S N++   LP EL    +L +LIL+ N +     A L +  SL  L L
Sbjct: 472 FGNLRSVQVIDISSNNLTGYLPEELGQLQNLDSLILNNNNLVGEIPAQLANCFSLITLNL 531

Query: 435 D-NNPLRQVPS-DGFKDIPM 452
             NN    VPS   F   PM
Sbjct: 532 SYNNFTGHVPSAKNFSKFPM 551



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 30/182 (16%)

Query: 64  LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
            + L  LT LN+S N    ++P+ +G +  L +LD+S+N     +P  IG    L++ + 
Sbjct: 400 FQELESLTYLNLSSNNFKGQIPSELGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNL 459

Query: 122 SSNQL-KELPSSLG--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           S N L   +P+  G  R + + D  +SNN    LPE+L     +  L        +L+NN
Sbjct: 460 SKNHLTGSVPAEFGNLRSVQVIDI-SSNNLTGYLPEELGQLQNLDSL--------ILNNN 510

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYM 237
                          NL+  +P  + +   LI L+L  N     +PS+ +      E ++
Sbjct: 511 ---------------NLVGEIPAQLANCFSLITLNLSYNNFTGHVPSAKNFSKFPMESFV 555

Query: 238 GN 239
           GN
Sbjct: 556 GN 557


>gi|148233354|ref|NP_001086369.1| leucine rich repeat containing 1 [Xenopus laevis]
 gi|49523200|gb|AAH75175.1| Scrp1 protein [Xenopus laevis]
 gi|83642783|dbj|BAE54373.1| scribble-related protein 1 [Xenopus laevis]
          Length = 524

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 196/422 (46%), Gaps = 52/422 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++  +RSL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N++ E+P +I     L+  D S N + ++PD      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLA 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L     +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LDV  N+L  
Sbjct: 129 SLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG+L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ L L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTELILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L                               KE  I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSL------------------------------PKE--IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L+V      +    LS IPSEI +A E+   D++ N +  LP  L+S   L+ L LS 
Sbjct: 335 CSLNV----FCVRENRLSRIPSEIAQATELHVFDVAGNRLTHLPLSLTS-LKLKALWLSD 389

Query: 413 NK 414
           N+
Sbjct: 390 NQ 391



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 188/453 (41%), Gaps = 88/453 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S++ +P+EI   + +L +    +NQL+ELP    + + L     S+N I  
Sbjct: 14  VESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        IA++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------IANFMQLVELDVSRNEIPEIPESISFCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     SL    + + +L  LP  +G LS L +L+L  N L      
Sbjct: 110 ADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLL------ 163

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                           + LP  + ++  L +L +  N L  L                  
Sbjct: 164 ----------------TFLPESLAQLHRLEELDVGNNELYNL------------------ 189

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             PE              T+ +   +  K+L L+G  L+ +P EI     +  LDLS N 
Sbjct: 190 --PE--------------TIGSLYKL--KDLWLDGNQLADLPPEIGNLKNLLCLDLSENK 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ LP E+S   SL  L++S N I+  PD I   L +LS LK+D N L Q+ +D   +  
Sbjct: 232 LERLPEEISGLKSLTDLLVSHNSIEVLPDGI-GKLKNLSILKVDQNRLMQL-TDCIGECE 289

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L  L L+ N +  LP +     L  L  L + R +L   P +I     L +  + +N L
Sbjct: 290 SLTELILTENQLLVLPRS--IGKLKKLCNLNIDRNKLMSLPKEIGGCCSLNVFCVRENRL 347

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             IP      T L   D++ N ++ LP  L S+
Sbjct: 348 SRIPSEIAQATELHVFDVAGNRLTHLPLSLTSL 380



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +P+ F  L  L +L LSDN I 
Sbjct: 13  HVESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
           pulchellus]
          Length = 463

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 195/430 (45%), Gaps = 72/430 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ ++  L DVP+EV+ N++             L++L L  N I+ L   L +   L  L
Sbjct: 16  LDYAHHGLEDVPSEVF-NYERT-----------LEELYLNANQIKDLPRPLFHCHGLRKL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N +  LP A+  L  L+ LD+S N++++IPD I     L   + S N + +LP   
Sbjct: 64  NLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGF 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + LN+     ++  +  LP +    SK+  L++  N L VL                  
Sbjct: 124 TQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVL------------------ 165

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+++  L+ L RLD+ QN    +P  I    SL E +  +N L++LP+ +G L 
Sbjct: 166 ------PKSMARLTELSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHL- 218

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                                ++L+ LD S N +S +  EI  MT L  L LT N L+ +
Sbjct: 219 ---------------------IKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKI 257

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  L +L++      D     T  D I   ++L    +EL +    + ++P
Sbjct: 258 ---------PETLGFLQNLTTLRLDDNHLATLPDSIGQLSKL----EELIINSNEIDSLP 304

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           S I     +T L    N +++LPPE+ SC+ L+ L L  N++ + PD  L  LSSL  + 
Sbjct: 305 STIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDE-LGHLSSLRVVN 363

Query: 434 LDNNPLRQVP 443
           L  N LR +P
Sbjct: 364 LSGNQLRHLP 373



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 197/464 (42%), Gaps = 86/464 (18%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLP-LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +++ L  AH+ +E +  ++ N    L  L ++ N++ +LP  +   H L+ L++S N I 
Sbjct: 12  EVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQ 71

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  + S  +L + D S N + E+P ++  C  LS  +AS N +  LPE       + +
Sbjct: 72  TLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQ 131

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +    L  L  N     + L  L   +N L  +P+++  L+ L RLD+ QN    +P 
Sbjct: 132 LYLNDTFLEYLPANF-GRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPE 190

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I    SL E +  +N L++LP+ +G L                      ++L+ LD S 
Sbjct: 191 VIGSLPSLTELWCDSNRLTSLPSYMGHL----------------------IKLTYLDASR 228

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N +S +  EI  MT L  L LT N L+ +         P  L +L++      D     T
Sbjct: 229 NRISFIADEIENMTMLSDLTLTTNKLQKI---------PETLGFLQNLTTLRLDDNHLAT 279

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             D I   ++L    +EL +    + ++PS I     +T L    N +++LPPE+ SC+ 
Sbjct: 280 LPDSIGQLSKL----EELIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSK 335

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L L  N++ + PD  L  LSSL  + L  N                           
Sbjct: 336 LRVLSLRDNRLCNVPDE-LGHLSSLRVVNLSGN--------------------------- 367

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
                                QLR  P  + +L  L  L LSQN
Sbjct: 368 ---------------------QLRHLPVSLAKLGGLHALWLSQN 390



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 5/283 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + + + +++++L L    +E L  +   L  L +L +  N L  LP ++  L  L  LD+
Sbjct: 121 EGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDI 180

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N   ++P+ IGS  +L +  C SN+L  LPS +G  + L+   AS N I+ + +++ +
Sbjct: 181 GQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIEN 240

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +S L +  NKL  +   L      LT L    N L  +P++IG LS+L  L ++ N 
Sbjct: 241 MTMLSDLTLTTNKLQKIPETL-GFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNE 299

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I S+PS+I    +L      +N L  LP E+G  SKL  L L  N+L     E   L  L
Sbjct: 300 IDSLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSL 359

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN---PLRTLRSSL 317
            V++LS N L  LP  + K+  L  L L+ N   PL  L+S +
Sbjct: 360 RVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQTKPLVLLQSDV 402



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 190/453 (41%), Gaps = 88/453 (19%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++ LD + + +  +P E+      L +   ++NQ+K+LP  L  C  L     S+N I +
Sbjct: 13  VRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQT 72

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP  L+    + +LD+                        SKN +  +P+ I     L  
Sbjct: 73  LPPALSSLISLEELDI------------------------SKNNVIEIPDNIKGCKCLSI 108

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           ++   N +  +P   +   ++ + Y+ +  L  LPA  G+LSKL                
Sbjct: 109 VEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKL---------------- 152

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                  +L+L  N L  LP  + ++T L +L +  N                      +
Sbjct: 153 ------KILELRENHLKVLPKSMARLTELSRLDIGQNDF--------------------T 186

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            LPE   S  S T                EL  +   L+++PS +    ++T LD SRN 
Sbjct: 187 ELPEVIGSLPSLT----------------ELWCDSNRLTSLPSYMGHLIKLTYLDASRNR 230

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           I  +  E+ +   L  L L+ NK++  P+  L  L +L+ L+LD+N L  +P D    + 
Sbjct: 231 ISFIADEIENMTMLSDLTLTTNKLQKIPET-LGFLQNLTTLRLDDNHLATLP-DSIGQLS 288

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ L ++ N I SLP       L +L  L      L + P +I    +LR+L L  N L
Sbjct: 289 KLEELIINSNEIDSLPST--IGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRL 346

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            ++P+   +L+SL  ++LS N +  LP  L  +
Sbjct: 347 CNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKL 379


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++P  
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ L  E+GKL  L  L+LHSNQL     E  QL+ L  L LS 
Sbjct: 251 IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSY 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  LP EIG++  L++L L  N L  L
Sbjct: 311 NRLVILPKEIGQLQNLQELNLWNNQLTAL 339



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 162/352 (46%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S    + LP  I +L  L+ L +  N +  +P EIG    L + + SSNQL  LP 
Sbjct: 52  VLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP ++     +  L +  N+LT L          L EL  
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE-SGKLENLQELNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GK
Sbjct: 171 SDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGK 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL    +E  +L+ L  L+LS N L+ L  EIGK+  L+ L L  N L
Sbjct: 231 LQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  + T        LSL    L 
Sbjct: 291 TTLSKEI----------------------------EQLKNLQT--------LSLSYNRLV 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P EI +   + +L+L  N +  LP E+    +LQTL L +N++  +P  I
Sbjct: 315 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L  +P E+              +  +LQ L L  N +  L +++  L  L  L
Sbjct: 168 LNLSDNQLTTLPQEI-------------GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L +L++S N +  +P EIG    L   + S NQL  L   +
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL D    +N +T+L +++     +  L +  N+L +L    I     L EL    
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE-IGQLQNLQELNLWN 333

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           N L  +P  IG L  L  L L++NR+++ P  I    +L   Y+G
Sbjct: 334 NQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLG 378



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L G N + +P +I +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 528 LSDNNISALPPEL 540
           LSDN ++ LP E+
Sbjct: 216 LSDNQLTTLPIEI 228



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 5/173 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +P EI +   + +L+LS N +  LP E+    +LQ L L  N++   P  I   L +
Sbjct: 83  LKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI-GKLQN 141

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L +N L  +P +  K +  LQ L+LS N + +LP+      L +LQ L L+  QL
Sbjct: 142 LQTLYLSSNQLTTLPRESGK-LENLQELNLSDNQLTTLPQ--EIGQLQNLQTLNLKSNQL 198

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                +I +L+ L+ L+LS N L ++P     L +L  L+LSDN ++ LP E+
Sbjct: 199 TTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEI 251



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 236 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 282

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 283 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 213 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSDNQLTTLPIEIGKLQNLHT 259

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N+L+ L   IG+L  L+ L++  N +  +  EI     L     S N+L  LP  
Sbjct: 260 LNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE 319

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           +G+  NL +    NN +T+LP ++     +  L +  N+L
Sbjct: 320 IGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRL 359


>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
           pisum]
          Length = 559

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 207/453 (45%), Gaps = 57/453 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L +VP+ VYK  D             L  L L  N I  + +D+  L  L +L
Sbjct: 153 LDLRHNKLTEVPDVVYK-LDT------------LTTLFLRFNRIRTVSDDISKLVNLVML 199

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL + IG+L  + + DVS N +  +P+EIG+   L   D   N+L ++P ++
Sbjct: 200 SLRENKIKELSSGIGKLDKVVTFDVSHNHLEHLPEEIGNCIQLSTLDLQHNELVDIPETI 259

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N + +LP  L++C++M + +VEGN L+ L + L+ +   +  +  ++
Sbjct: 260 GNLTLLTRLGLRYNRLKNLPNSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMNSITLAR 319

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  ++ I +D      N+I  IP  I S    L +  M +NAL++LP ++
Sbjct: 320 NSFTAYP--TGGPAQFIAVDSINFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSLPLDV 377

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L++ +N + +   +   L+ L VL LSNN L  LP  IG +  LR L L  N
Sbjct: 378 GSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEEN 437

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL         P  + YLR                             ++L L+   
Sbjct: 438 KLETL---------PQEIGYLREL---------------------------QKLILQSNQ 461

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L ++P  I     +  L +  N +  LP E+ +  +L+ L ++ N+        L   S 
Sbjct: 462 LLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLENLEALYINDNQSLHHLPFELALCSK 521

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
           L  L ++N PL Q+  D  K  P L +  L  N
Sbjct: 522 LQLLGIENCPLSQL-GDAVKGGPSLVMTYLKVN 553



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 233/522 (44%), Gaps = 71/522 (13%)

Query: 22  RDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS 81
           + +  +  K      +  +W       +L L+ + + K+   +R+   LT L +  NKL 
Sbjct: 63  KKIVQDATKEIQNCNDSSEW-------RLDLSKSGLTKVPITIRDATQLTELYLYGNKLI 115

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            LP+ IG L  L++L +S NS+  +PD + + T+L   D   N+L E+P  + +   L+ 
Sbjct: 116 TLPSEIGCLTNLQTLALSENSLTCLPDSLANLTSLKVLDLRHNKLTEVPDVVYKLDTLTT 175

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N I ++ +D++    +  L +  NK+  LS+  I     +     S N L  +PE
Sbjct: 176 LFLRFNRIRTVSDDISKLVNLVMLSLRENKIKELSSG-IGKLDKVVTFDVSHNHLEHLPE 234

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG+  +L  LDL  N ++ IP +I     L    +  N L  LP  L           +
Sbjct: 235 EIGNCIQLSTLDLQHNELVDIPETIGNLTLLTRLGLRYNRLKNLPNSLS----------N 284

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
            N++ E+ VE             N LS LP   G +  L+++    N +   R+S    P
Sbjct: 285 CNRMDEFNVEG------------NMLSCLPD--GLLVNLKEM----NSITLARNSFTAYP 326

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAG 380
           T    ++                            +    ++ E   +  IP  I+ +A 
Sbjct: 327 TGGPAQF----------------------------IAVDSINFEHNKIDKIPYGIFSKAN 358

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +TKL++  N++  LP ++ S  ++  L ++ N I   PD I   L SL  L L NN L+
Sbjct: 359 YLTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITKLPDDI-QYLQSLEVLILSNNLLK 417

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
           ++P+    ++  L++LDL  N + +LP+   +  L  LQ+L L+  QL   P  I  L  
Sbjct: 418 RLPA-TIGNLQKLRVLDLEENKLETLPQEIGY--LRELQKLILQSNQLLSLPRAIGHLTN 474

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           L  L + +N L ++PE    L +L  L ++DN ++  LP EL
Sbjct: 475 LAYLSVGENKLSTLPEEIGTLENLEALYINDNQSLHHLPFEL 516


>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
          Length = 561

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 210/448 (46%), Gaps = 58/448 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I  + ED+RNL  L  L
Sbjct: 154 LDLRHNKLCEIPDVVYK-------------LTSLITLYLRFNRIRVVGEDIRNLKNLITL 200

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ + PA IGEL  L +LD + N    + +EIG+   L       N+L +LP S+
Sbjct: 201 SLRGNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSI 260

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL+      N +T++P  L+ C  + + +VEGN+++ L   L++S + L+ L  S+
Sbjct: 261 GYLRNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSR 320

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  +G  S+      ++L  N++  IP  I S    L +  M  N L++LP ++
Sbjct: 321 NAFNSYP--VGGPSQFTNVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDI 378

Query: 250 GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +N L +   + +C   L VL LSNN+L  +P  IG +  LR L L  N
Sbjct: 379 GSWQNMVELNLGTNHLTKVPDDISCLQSLEVLILSNNNLRKIPSSIGNLRKLRVLDLEEN 438

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L       P    LK L+                       RL V S +       
Sbjct: 439 RLEGL------PPEIGFLKDLQ-----------------------RLIVQSNQ------- 462

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           LSA+P  +     +T L +  N++  LP E+ +  SL+TL ++ N ++ + P   L   +
Sbjct: 463 LSALPRALGHLVNLTYLSVGENNLSYLPEEIGTLESLETLYINDNPQLHNLPFE-LALCT 521

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           +L  + ++N PL Q+P +     P   I
Sbjct: 522 NLQIMSIENCPLSQIPPEIVAGGPSFVI 549



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 213/474 (44%), Gaps = 43/474 (9%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +SI +IP  + + T LV+F   SN+L  LP  +G  +NL     S N +TSLP+ 
Sbjct: 85  LDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLPDT 144

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA+  K+  LD+  NKL  + + ++   T L  L    N +  + E I +L  LI L L 
Sbjct: 145 LANLEKLRVLDLRHNKLCEIPD-VVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLSLR 203

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N+I   P+ I     LA     +N    L  E+G    L TL L  N+L +       L
Sbjct: 204 GNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSIGYL 263

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           R L+ L L  N L+ +P  + K   L +  + GN +    S L  G   +L       L 
Sbjct: 264 RNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQI----SQLPEGLLSSLSNLSSLTLS 319

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQ 393
            N  +          T           ++LE   +  IP  I+  A  +TKL+++ N + 
Sbjct: 320 RNAFNSYPVGGPSQFT-------NVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLT 372

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP ++ S  ++  L L  N +   PD I + L SL  L L NN LR++PS    ++  L
Sbjct: 373 SLPLDIGSWQNMVELNLGTNHLTKVPDDI-SCLQSLEVLILSNNNLRKIPSS-IGNLRKL 430

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           ++LDL  N +  LP  P    L  LQ L ++  QL   P  +  L  L  L + +N+L  
Sbjct: 431 RVLDLEENRLEGLP--PEIGFLKDLQRLIVQSNQLSALPRALGHLVNLTYLSVGENNLSY 488

Query: 513 IPEGFKNLTSLTELDLSDNN------------------------ISALPPELVS 542
           +PE    L SL  L ++DN                         +S +PPE+V+
Sbjct: 489 LPEEIGTLESLETLYINDNPQLHNLPFELALCTNLQIMSIENCPLSQIPPEIVA 542



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 203/443 (45%), Gaps = 25/443 (5%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S++ + ++PSS+    +L +F   +N +T+LP ++     +  L +  N LT L 
Sbjct: 83  LRLDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLP 142

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           + L A+   L  L    N L  +P+ +  L+ LI L L  NRI  +   I    +L    
Sbjct: 143 DTL-ANLEKLRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLS 201

Query: 237 MGNNALSALPAELGKLSKLGTLDL---HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           +  N +   PA +G+L+ L TLD    HS  L E  +  C + L  L L +N L  LP  
Sbjct: 202 LRGNKIRQPPAGIGELTGLATLDAAHNHSEHLSEE-IGNC-MCLQTLHLQHNELLDLPQS 259

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +  L  L L  N L  +  SL             +++ +  +   S+         +
Sbjct: 260 IGYLRNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLS 319

Query: 354 RLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 400
           R +  S              ++LE   +  IP  I+  A  +TKL+++ N +  LP ++ 
Sbjct: 320 RNAFNSYPVGGPSQFTNVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDIG 379

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
           S  ++  L L  N +   PD I + L SL  L L NN LR++PS    ++  L++LDL  
Sbjct: 380 SWQNMVELNLGTNHLTKVPDDI-SCLQSLEVLILSNNNLRKIPSS-IGNLRKLRVLDLEE 437

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           N +  LP  P    L  LQ L ++  QL   P  +  L  L  L + +N+L  +PE    
Sbjct: 438 NRLEGLP--PEIGFLKDLQRLIVQSNQLSALPRALGHLVNLTYLSVGENNLSYLPEEIGT 495

Query: 520 LTSLTELDLSDN-NISALPPELV 541
           L SL  L ++DN  +  LP EL 
Sbjct: 496 LESLETLYINDNPQLHNLPFELA 518


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNVLPNKLEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 KEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNVLPNK-LEQLQNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 173/404 (42%), Gaps = 73/404 (18%)

Query: 171 KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 26  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 85

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 86  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 145

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 146 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 191

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 192 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 229

Query: 400 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 437
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 289

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 290 QLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKLEQ 346

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 347 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L E++  L  L  L + +N+L+ LP  + +L  L+SLD+  N +  
Sbjct: 303 NLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 362

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L   +   NQL  LP  + +  NL      NN + S
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|60327200|gb|AAX19023.1| Hcr2-p1.1 [Solanum pimpinellifolium]
          Length = 991

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 256/537 (47%), Gaps = 60/537 (11%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L++NNI   +  ++ NL  L  L+++ N++S  +P  IG L  L+ + + FN+ +
Sbjct: 97  LENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRI-FNNHL 155

Query: 105 K--IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG   +L K     N L   +P+SLG   NLS     NN ++ S+PE++    
Sbjct: 156 NGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLR 215

Query: 161 KMSKLDVEGNKLT-----------------VLSNNL-------IASWTMLTELIASKNLL 196
            ++KL +  N L+                 +  N L       I     LT+L    N L
Sbjct: 216 SLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFL 275

Query: 197 NG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           +G +P ++G+L+ L RLDL+ N++  SIP  I    SL    +G NAL+  +PA LG L+
Sbjct: 276 SGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLN 335

Query: 254 KLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
            L  L L++NQL     E    LR L+ L L NN LSG +P  +GK+     + L  N L
Sbjct: 336 NLFMLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQL 395

Query: 311 RTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
                   +G  P  + YLRS     L EN  + +       +     L + + +LS   
Sbjct: 396 --------SGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLS--- 444

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
               +IP EI     +T LDL  N++   +P  L +  +L  L L  N++       +  
Sbjct: 445 ---GSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGY 501

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSLPHLQELYLRR 484
           LSSL+ L L NN L  +    F ++  LQ L L+ N   + E P F  +L  L+ LY+ R
Sbjct: 502 LSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDN-NLIGEIPSFVCNLTSLELLYMPR 560

Query: 485 MQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPPE 539
             L+ + P  +  +  L +L +S NS    +P    NLTSL  LD   NN+    P+
Sbjct: 561 NNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQ 617



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 160/551 (29%), Positives = 258/551 (46%), Gaps = 66/551 (11%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI- 103
           LQ + + +N++   + E++  L  LT L++  N LS  +PA++G L+ L SL +  N + 
Sbjct: 145 LQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLS 204

Query: 104 MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT------------ 150
             IP+EIG   +L K     N L   + +SLG   NLS     +N ++            
Sbjct: 205 GSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRS 264

Query: 151 -------------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
                        S+P  L + + +S+LD+  NKL+      I     LT L   +N LN
Sbjct: 265 LTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALN 324

Query: 198 G-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +P ++G+L+ L  L L+ N++  SIP  I    SL +  +GNN LS  +PA LGKL+ 
Sbjct: 325 GSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNN 384

Query: 255 LGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
             ++ L +NQL     E    LR L+ LDLS N+L+G +P  +G +  L  L L  N L 
Sbjct: 385 FFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLS 444

Query: 312 T----------------LRSSLVNGPTPALLKYLR--SRLPENEDSEASTTKEDLITMAT 353
                            L+ + +NG  PA L  L   SRL    +  + +  E++  +++
Sbjct: 445 GSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSS 504

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSR 412
             ++     SL G+    IP+       +  L L+ N+ I E+P  + +  SL+ L + R
Sbjct: 505 LTNLYLGNNSLNGL----IPASFGNMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPR 560

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENP 469
           N +K      L ++S L  L + +N    ++PS    ++  L+ILD   N    ++P+  
Sbjct: 561 NNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSS-ISNLTSLKILDFGRNNLEGAIPQ-- 617

Query: 470 PFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELD 527
            F ++  LQ   ++  +L    PT+      L  L+L  N L+  IP    N   L  LD
Sbjct: 618 CFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLD 677

Query: 528 LSDNNISALPP 538
           L DN ++   P
Sbjct: 678 LGDNQLNDTFP 688



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 228/491 (46%), Gaps = 37/491 (7%)

Query: 70  LTVLNVSH-NKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK 127
           LT+ N S    L   P +   L  L++LD+S N+I + IP EIG+ T LV  D ++NQ+ 
Sbjct: 75  LTITNASVIGTLYAFPFS--SLPFLENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQIS 132

Query: 128 -ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             +P  +G    L   +  NN +   +PE++     ++KL +  N L+      + +   
Sbjct: 133 GTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNN 192

Query: 186 LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 243
           L+ L    N L+G +PE IG L  L +L L  N +  SI +S+    +L+  Y+ +N LS
Sbjct: 193 LSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLS 252

Query: 244 A-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTT 299
             +P E+G L  L  L L  N L      +      LS LDL NN LSG +P EIG + +
Sbjct: 253 GSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRS 312

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRL 355
           L  L L  N L        NG  PA L  L +     L  N+ S +   +   +   T+L
Sbjct: 313 LTYLDLGENAL--------NGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTKL 364

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNK 414
           S+ +  LS       +IP+ + +      + L  N +   +P E+    SL  L LS N 
Sbjct: 365 SLGNNFLS------GSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENA 418

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFS 472
           +     A L +L++L  L L NN L     +    +  L  LDL  N    S+P +    
Sbjct: 419 LNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPAS--LG 476

Query: 473 SLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSD 530
           +L +L  LYL   QL  + P +I  L  L  L L  NSL   IP  F N+ +L  L L+D
Sbjct: 477 NLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLND 536

Query: 531 NNISALPPELV 541
           NN+    P  V
Sbjct: 537 NNLIGEIPSFV 547



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 216/486 (44%), Gaps = 58/486 (11%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++  N L   +PA++G L+ L  L +  N +
Sbjct: 432 NLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQL 491

Query: 104 -MKIPDEIGSATALVKFDCSSNQLKEL-PSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG  ++L      +N L  L P+S G   NL   F   NN I  +P  + + +
Sbjct: 492 SGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLT 551

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  N L       + + + L  L  S N  +G +P +I +L+ L  LD  +N +
Sbjct: 552 SLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNL 611

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQ 274
             +IP       SL  F M NN LS  LP        L +L+LH N+L++   + ++ C+
Sbjct: 612 EGAIPQCFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCK 671

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSR 332
            +L VLDL +N L+   P  +G +  LR L LT N L   +RSS      P L     SR
Sbjct: 672 -KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSR 730

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
              ++D   S   E L  M T +  T +E S E    S +         +TK        
Sbjct: 731 NAFSQDLPTSLF-EHLKGMRT-VDKTMEEPSYEIYYDSVVV--------VTK-------- 772

Query: 393 QELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
             L  E+    SL T+I LS NK +    ++L  L ++  L + +N L+         + 
Sbjct: 773 -GLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLS 831

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +L+ LDLS+N  S                        E P  +  L  L  L+LS N LQ
Sbjct: 832 ILESLDLSFNQLS-----------------------GEIPQQLASLTFLEFLNLSHNYLQ 868

Query: 512 S-IPEG 516
             IP+G
Sbjct: 869 GCIPQG 874


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 15/371 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P EIG+
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGN 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + +LP ++  C  L+    S+N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T+L +N I S T L  L A  NLL  +P +I  L +L  LDL QN + ++P+ I    SL
Sbjct: 141 TLLPSN-IGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY+  N+L++LP  +     L  LD+  NQ+        ++  L+ L++S N +  LP
Sbjct: 200 REFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              G++  L+ L    N L  L S +  G   +L +     L +N  ++   T  DL  +
Sbjct: 260 SSFGELKRLQMLKADRNSLHNLTSEI--GKCQSLTELY---LGQNFLTDLPDTIGDLRQL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T        L+++  NLS IP  I     +T L L +N + ELP  +  C +L  L ++
Sbjct: 315 TT--------LNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVA 366

Query: 412 RNKIKDWPDAI 422
            NK+   P  +
Sbjct: 367 SNKLPHLPFTV 377



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 183/422 (43%), Gaps = 47/422 (11%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S + L+ +PS + R   L D   + N I  L   L     +  LDV  N+L VL   
Sbjct: 18  IDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAE 77

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I + T L EL  ++N +  +P+T+ +   L  L+L  N    +P +I  C S+    + 
Sbjct: 78  -IGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLN 136

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
             +L+ LP+ +G L+ L  L+   N L+   +   +LR L  LDL  N L  LP EIGK+
Sbjct: 137 ETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKL 196

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMATR 354
           T+LR+  +  N L +L  S+        L    +   RLPEN     + T          
Sbjct: 197 TSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLT---------- 246

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                 +L++    +  +PS   E   +  L   RNS+  L  E+  C SL  L L +N 
Sbjct: 247 ------DLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNF 300

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           + D PD I   L  L+ L +D N L  +P D   +   L +L L  NI            
Sbjct: 301 LTDLPDTI-GDLRQLTTLNVDCNNLSDIP-DTIGNCKSLTVLSLRQNI------------ 346

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
                       L E P  I + + L +LD++ N L  +P   K L  L  L LS+N   
Sbjct: 347 ------------LTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQ 394

Query: 535 AL 536
           ++
Sbjct: 395 SI 396



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N+I KL + ++N  LLT LN+S N  + LP  I E   +  L ++  S+  +
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 107 PDEIGSAT-----------------------ALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IGS T                        L + D   N+L+ LP+ +G+  +L +F 
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +TSLP+ ++ C  + +LDV  N++  L  NL      LT+L  S N +  +P + 
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL-GRMPNLTDLNISINEIIELPSSF 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L RL  L   +N + ++ S I  C SL E Y+G N L+ LP  +G L +L TL++  N
Sbjct: 263 GELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCN 322

Query: 264 QLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L +    +  C+  L+VL L  N L+ LP  IGK   L  L +  N L
Sbjct: 323 NLSDIPDTIGNCK-SLTVLSLRQNILTELPMTIGKCENLTVLDVASNKL 370



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 160/363 (44%), Gaps = 48/363 (13%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I  +  L +L  + N +  +   + SL  L  LD+  N +  +P+ I     L E  +  
Sbjct: 32  IFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNR 91

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+++ LP  +     L TL+L SN         C+   +++L L+  SL+ LP  IG +T
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L    N LRT+  S+V       L+ L                             
Sbjct: 152 NLRVLEARDNLLRTIPLSIVE------LRKL----------------------------- 176

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L A+P+EI +   + +  +  NS+  LP  +S C  L  L +S N+I   
Sbjct: 177 -EELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRL 235

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS----YNIASLPENPPFSSL 474
           P+  L  + +L+ L +  N + ++PS  F ++  LQ+L       +N+ S          
Sbjct: 236 PEN-LGRMPNLTDLNISINEIIELPS-SFGELKRLQMLKADRNSLHNLTS-----EIGKC 288

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L ELYL +  L + P  I  L+QL  L++  N+L  IP+   N  SLT L L  N ++
Sbjct: 289 QSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILT 348

Query: 535 ALP 537
            LP
Sbjct: 349 ELP 351



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N I +L E+L  +P LT LN+S N++ ELP++ GEL  L+ L    NS+  +
Sbjct: 222 LDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   +L +     N L +LP ++G    L+      N ++ +P+ + +C  ++ L 
Sbjct: 282 TSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS 341

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +  N LT L    I     LT L  + N L  +P T+  L +L  L L +N+  SI
Sbjct: 342 LRQNILTELPMT-IGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 44/276 (15%)

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +C+  ACQ ++  +D S ++L  +P +I +   L  L LT N ++ L   L +      L
Sbjct: 5   FCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFS------L 58

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           ++LR                        L V+  EL++       +P+EI    ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNELAV-------LPAEIGNLTQLIELN 88

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L+RNSI +LP  + +C  L TL LS N     P+ I    SS++ L L+   L  +PS+ 
Sbjct: 89  LNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETI-CECSSITILSLNETSLTLLPSN- 146

Query: 447 FKDIPMLQILDLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              +  L++L+   N   L    P S   L  L+EL L + +L   P +I +L  LR   
Sbjct: 147 IGSLTNLRVLEARDN---LLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +  NSL S+P+       L +LD+S+N I  LP  L
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL 239



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 26/163 (15%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  +D S++++Q +P ++     L+ L L+ N IK+  D  L SL  L  L + +N L 
Sbjct: 14  QVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLRILDVSDNELA 72

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            +P++                           +L  L EL L R  + + P  +   + L
Sbjct: 73  VLPAE-------------------------IGNLTQLIELNLNRNSIAKLPDTMQNCKLL 107

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L+LS N    +PE     +S+T L L++ +++ LP  + S+
Sbjct: 108 TTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSL 150



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 469 PPFSSLP---HLQELYLRRMQ--LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           P F  LP     Q   + R Q  L+  P+DI R ++L  L+L+ N+++ +     +L  L
Sbjct: 2   PAFFCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHL 61

Query: 524 TELDLSDNNISALPPEL 540
             LD+SDN ++ LP E+
Sbjct: 62  RILDVSDNELAVLPAEI 78


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 15/371 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P EIG+
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGN 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + +LP ++  C  L+    S+N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T+L +N I S T L  L A  NLL  +P +I  L +L  LDL QN + ++P+ I    SL
Sbjct: 141 TLLPSN-IGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY+  N+L++LP  +     L  LD+  NQ+        ++  L+ L++S N +  LP
Sbjct: 200 REFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              G++  L+ L    N L  L S +  G   +L +     L +N  ++   T  DL  +
Sbjct: 260 SSFGELKRLQMLKADRNSLHNLTSEI--GKCQSLTELY---LGQNFLTDLPDTIGDLRQL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T        L+++  NLS IP  I     +T L L +N + ELP  +  C +L  L ++
Sbjct: 315 TT--------LNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVA 366

Query: 412 RNKIKDWPDAI 422
            NK+   P  +
Sbjct: 367 SNKLPHLPFTV 377



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 183/422 (43%), Gaps = 47/422 (11%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S + L+ +PS + R   L D   + N I  L   L     +  LDV  N+L VL   
Sbjct: 18  IDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAE 77

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I + T L EL  ++N +  +P+T+ +   L  L+L  N    +P +I  C S+    + 
Sbjct: 78  -IGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLN 136

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
             +L+ LP+ +G L+ L  L+   N L+   +   +LR L  LDL  N L  LP EIGK+
Sbjct: 137 ETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKL 196

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMATR 354
           T+LR+  +  N L +L  S+        L    +   RLPEN     + T          
Sbjct: 197 TSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLT---------- 246

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                 +L++    +  +PS   E   +  L   RNS+  L  E+  C SL  L L +N 
Sbjct: 247 ------DLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNF 300

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           + D PD I   L  L+ L +D N L  +P D   +   L +L L  NI            
Sbjct: 301 LTDLPDTI-GDLRQLTTLNVDCNNLSDIP-DTIGNCKSLTVLSLRQNI------------ 346

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
                       L E P  I + + L +LD++ N L  +P   K L  L  L LS+N   
Sbjct: 347 ------------LTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQ 394

Query: 535 AL 536
           ++
Sbjct: 395 SI 396



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N+I KL + ++N  LLT LN+S N  + LP  I E   +  L ++  S+  +
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 107 PDEIGSAT-----------------------ALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IGS T                        L + D   N+L+ LP+ +G+  +L +F 
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +TSLP+ ++ C  + +LDV  N++  L  NL      LT+L  S N +  +P + 
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL-GRMPNLTDLNISINEIIELPSSF 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L RL  L   +N + ++ S I  C SL E Y+G N L+ LP  +G L +L TL++  N
Sbjct: 263 GELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCN 322

Query: 264 QLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L +    +  C+  L+VL L  N L+ LP  IGK   L  L +  N L
Sbjct: 323 NLSDIPDTIGNCK-SLTVLSLRQNILTELPMTIGKCENLTVLDVASNKL 370



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 160/363 (44%), Gaps = 48/363 (13%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I  +  L +L  + N +  +   + SL  L  LD+  N +  +P+ I     L E  +  
Sbjct: 32  IFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNR 91

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+++ LP  +     L TL+L SN         C+   +++L L+  SL+ LP  IG +T
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L    N LRT+  S+V       L+ L                             
Sbjct: 152 NLRVLEARDNLLRTIPLSIVE------LRKL----------------------------- 176

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L A+P+EI +   + +  +  NS+  LP  +S C  L  L +S N+I   
Sbjct: 177 -EELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRL 235

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS----YNIASLPENPPFSSL 474
           P+  L  + +L+ L +  N + ++PS  F ++  LQ+L       +N+ S          
Sbjct: 236 PEN-LGRMPNLTDLNISINEIIELPS-SFGELKRLQMLKADRNSLHNLTS-----EIGKC 288

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L ELYL +  L + P  I  L+QL  L++  N+L  IP+   N  SLT L L  N ++
Sbjct: 289 QSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILT 348

Query: 535 ALP 537
            LP
Sbjct: 349 ELP 351



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N I +L E+L  +P LT LN+S N++ ELP++ GEL  L+ L    NS+  +
Sbjct: 222 LDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   +L +     N L +LP ++G    L+      N ++ +P+ + +C  ++ L 
Sbjct: 282 TSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS 341

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +  N LT L    I     LT L  + N L  +P T+  L +L  L L +N+  SI
Sbjct: 342 LRQNILTELPMT-IGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 44/276 (15%)

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +C+  ACQ ++  +D S ++L  +P +I +   L  L LT N ++ L   L +      L
Sbjct: 5   FCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFS------L 58

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           ++LR                        L V+  EL++       +P+EI    ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNELAV-------LPAEIGNLTQLIELN 88

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L+RNSI +LP  + +C  L TL LS N     P+ I    SS++ L L+   L  +PS+ 
Sbjct: 89  LNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETI-CECSSITILSLNETSLTLLPSN- 146

Query: 447 FKDIPMLQILDLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              +  L++L+   N   L    P S   L  L+EL L + +L   P +I +L  LR   
Sbjct: 147 IGSLTNLRVLEARDN---LLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +  NSL S+P+       L +LD+S+N I  LP  L
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL 239



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 26/163 (15%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  +D S++++Q +P ++     L+ L L+ N IK+  D  L SL  L  L + +N L 
Sbjct: 14  QVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLRILDVSDNELA 72

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            +P++                           +L  L EL L R  + + P  +   + L
Sbjct: 73  VLPAE-------------------------IGNLTQLIELNLNRNSIAKLPDTMQNCKLL 107

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L+LS N    +PE     +S+T L L++ +++ LP  + S+
Sbjct: 108 TTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSL 150



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 469 PPFSSLP---HLQELYLRRMQ--LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           P F  LP     Q   + R Q  L+  P+DI R ++L  L+L+ N+++ +     +L  L
Sbjct: 2   PAFFCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHL 61

Query: 524 TELDLSDNNISALPPEL 540
             LD+SDN ++ LP E+
Sbjct: 62  RILDVSDNELAVLPAEI 78


>gi|297846638|ref|XP_002891200.1| hypothetical protein ARALYDRAFT_473694 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337042|gb|EFH67459.1| hypothetical protein ARALYDRAFT_473694 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1123

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 241/513 (46%), Gaps = 50/513 (9%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L  L L HN +   +  DL N+  +T L +SHNKL+  +P+++G L  L  L +  N +
Sbjct: 154 NLTVLDLHHNYLTGVIPPDLGNMESMTYLELSHNKLTGSIPSSLGNLKNLTVLYLYQNYL 213

Query: 104 MK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
              IP E+G+  +++  + S+N+L   +PSSLG   NL+     +N +T  +P +L +  
Sbjct: 214 TGVIPPELGNMESMIDLELSTNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNME 273

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            M  L++  NKLT    + + +   LT L   KN L G +P  +G++  +  LDL +N++
Sbjct: 274 SMIDLELSDNKLTGSIPSSLGNLKNLTVLYLYKNYLTGVIPPELGNMESMTYLDLSENKL 333

Query: 220 L-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--L 275
             SIPSS+    +L   Y+ +N L+  +P ELG L  +  L+L  N+L      +     
Sbjct: 334 TGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNLESMIDLELSDNKLTGSIPSSLGNLK 393

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            L+VL L +N L+G +PPE+G M ++  L L+ N L         G  P+          
Sbjct: 394 NLTVLYLHHNYLTGVIPPELGNMESMIDLALSQNNL--------TGSIPS---------- 435

Query: 335 ENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
               S  + TK E L      LS T             IP  +  + E+T+L L  N+  
Sbjct: 436 ----SFGNFTKLESLYLRDNHLSGT-------------IPRGVANSSELTELLLDINNFT 478

Query: 394 ELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
              PE +     LQ   L  N ++      L    SL   K   N      S+ F   P 
Sbjct: 479 GFLPENICKGGKLQNFSLDYNHLEGHIPKSLRDCKSLIRAKFVGNKFIGNISEAFGVYPD 538

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ 511
           L  +DLS+N  +   +  +   P L  L +    +  A P +I  ++QL  LDLS N+L 
Sbjct: 539 LDFIDLSHNKFNGEISSNWQKSPKLGALIMSNNNITGAIPPEIWNMKQLGELDLSTNNLT 598

Query: 512 S-IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             +PE   NLT L++L L+ N +S   P  +S 
Sbjct: 599 GELPEAIGNLTGLSKLLLNGNKLSGRVPTGLSF 631



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 240/526 (45%), Gaps = 74/526 (14%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFD 120
           +L N+  +  L +S NKL+  +P+++G L  L  L +  N +   IP E+G+  +++  +
Sbjct: 220 ELGNMESMIDLELSTNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMIDLE 279

Query: 121 CSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNN 178
            S N+L   +PSSLG   NL+      N +T  +P +L +   M+ LD+  NKLT    +
Sbjct: 280 LSDNKLTGSIPSSLGNLKNLTVLYLYKNYLTGVIPPELGNMESMTYLDLSENKLTGSIPS 339

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFY 236
            + +   LT L    N L G +P  +G+L  +I L+L  N++  SIPSS+    +L   Y
Sbjct: 340 SLGNLKNLTVLYLHHNYLTGVIPPELGNLESMIDLELSDNKLTGSIPSSLGNLKNLTVLY 399

Query: 237 MGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPP 292
           + +N L+  +P ELG +  +  L L  N L      +     +L  L L +N LSG +P 
Sbjct: 400 LHHNYLTGVIPPELGNMESMIDLALSQNNLTGSIPSSFGNFTKLESLYLRDNHLSGTIPR 459

Query: 293 EIGKMTTLRKLLL--------------TGNPLR--TLRSSLVNGPTPALLK----YLRSR 332
            +   + L +LLL               G  L+  +L  + + G  P  L+     +R++
Sbjct: 460 GVANSSELTELLLDINNFTGFLPENICKGGKLQNFSLDYNHLEGHIPKSLRDCKSLIRAK 519

Query: 333 LPENED----SEASTTKEDLITMATRLSVTSKELS-------------LEGMNLS-AIPS 374
              N+     SEA     DL  +    +  + E+S             +   N++ AIP 
Sbjct: 520 FVGNKFIGNISEAFGVYPDLDFIDLSHNKFNGEISSNWQKSPKLGALIMSNNNITGAIPP 579

Query: 375 EIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           EIW   ++ +LDLS N++  ELP  + +   L  L+L+ NK+                  
Sbjct: 580 EIWNMKQLGELDLSTNNLTGELPEAIGNLTGLSKLLLNGNKLSG---------------- 623

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
                  +VP+ G   +  L+ LDLS N  S      F S   L E+ L +         
Sbjct: 624 -------RVPT-GLSFLTNLESLDLSSNRFSSQIPQTFDSFLKLHEMNLSKNNFDGRIPG 675

Query: 494 ILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 538
           + +L QL  LDLS N L   IP    +L SL +L+LS NN+S   P
Sbjct: 676 LTKLTQLTHLDLSHNQLDGEIPSQLSSLQSLDKLNLSHNNLSGFIP 721



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 219/489 (44%), Gaps = 55/489 (11%)

Query: 93  LKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCIT 150
           L S+D+S N     IP + G+ + L+ FD S+N L +E+P SLG   NL+     +N +T
Sbjct: 107 LASIDLSMNRFSGTIPPQFGNLSKLIYFDLSTNHLTREIPPSLGNLKNLTVLDLHHNYLT 166

Query: 151 S-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSR 208
             +P DL +   M+ L++  NKLT    + + +   LT L   +N L G +P  +G++  
Sbjct: 167 GVIPPDLGNMESMTYLELSHNKLTGSIPSSLGNLKNLTVLYLYQNYLTGVIPPELGNMES 226

Query: 209 LIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLK 266
           +I L+L  N++  SIPSS+    +L   Y+ +N L+  +P ELG +  +  L+L  N+L 
Sbjct: 227 MIDLELSTNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMIDLELSDNKLT 286

Query: 267 EYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                +      L+VL L  N L+G +PPE+G M ++  L L+ N L         G  P
Sbjct: 287 GSIPSSLGNLKNLTVLYLYKNYLTGVIPPELGNMESMTYLDLSENKL--------TGSIP 338

Query: 324 ALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
           + L  L+  + L  + +        +L  + + + +   +  L G    +IPS +     
Sbjct: 339 SSLGNLKNLTVLYLHHNYLTGVIPPELGNLESMIDLELSDNKLTG----SIPSSLGNLKN 394

Query: 382 ITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           +T L L  N +   +PPEL +  S+  L LS+N +     +   + + L  L L +N L 
Sbjct: 395 LTVLYLHHNYLTGVIPPELGNMESMIDLALSQNNLTGSIPSSFGNFTKLESLYLRDNHLS 454

Query: 441 QVPSDGFKDIPMLQ--ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-- 496
                G  +   L   +LD++     LPEN        LQ   L    L       LR  
Sbjct: 455 GTIPRGVANSSELTELLLDINNFTGFLPEN--ICKGGKLQNFSLDYNHLEGHIPKSLRDC 512

Query: 497 -----------------------LQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNN 532
                                     L  +DLS N     I   ++    L  L +S+NN
Sbjct: 513 KSLIRAKFVGNKFIGNISEAFGVYPDLDFIDLSHNKFNGEISSNWQKSPKLGALIMSNNN 572

Query: 533 IS-ALPPEL 540
           I+ A+PPE+
Sbjct: 573 ITGAIPPEI 581



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 197/445 (44%), Gaps = 46/445 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFD 120
           +L N+  +T L++S NKL+  +P+++G L  L  L +  N +   IP E+G+  +++  +
Sbjct: 316 ELGNMESMTYLDLSENKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNLESMIDLE 375

Query: 121 CSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-------------------------SLPE 154
            S N+L   +PSSLG   NL+     +N +T                         S+P 
Sbjct: 376 LSDNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMIDLALSQNNLTGSIPS 435

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLD 213
              + +K+  L +  N L+      +A+ + LTEL+   N   G +PE I    +L    
Sbjct: 436 SFGNFTKLESLYLRDNHLSGTIPRGVANSSELTELLLDINNFTGFLPENICKGGKLQNFS 495

Query: 214 LHQNRILS-IPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L  N +   IP S+  C SL    ++GN  +  +    G    L  +DL  N+       
Sbjct: 496 LDYNHLEGHIPKSLRDCKSLIRAKFVGNKFIGNISEAFGVYPDLDFIDLSHNKFNGEISS 555

Query: 272 ACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
             Q   +L  L +SNN+++G +PPEI  M  L +L L+ N L       + G    L K 
Sbjct: 556 NWQKSPKLGALIMSNNNITGAIPPEIWNMKQLGELDLSTNNLTGELPEAI-GNLTGLSKL 614

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L   L  N+ S    T    +T    L ++S   S      S IP       ++ +++LS
Sbjct: 615 L---LNGNKLSGRVPTGLSFLTNLESLDLSSNRFS------SQIPQTFDSFLKLHEMNLS 665

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
           +N+     P L+    L  L LS N++     + L+SL SL  L L +N L       F+
Sbjct: 666 KNNFDGRIPGLTKLTQLTHLDLSHNQLDGEIPSQLSSLQSLDKLNLSHNNLSGFIPTTFE 725

Query: 449 DIPMLQILDLSYNI--ASLPENPPF 471
            +  L  +D+S N     LP+NP F
Sbjct: 726 SMKALTFIDISNNKLEGPLPDNPAF 750



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 28/243 (11%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSAT 114
           I  + E     P L  +++SHNK   E+ +   +   L +L +S N+I   IP EI +  
Sbjct: 526 IGNISEAFGVYPDLDFIDLSHNKFNGEISSNWQKSPKLGALIMSNNNITGAIPPEIWNMK 585

Query: 115 ALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKL 172
            L + D S+N L  ELP ++G    LS    + N ++  +P  L+  + +  LD+  N+ 
Sbjct: 586 QLGELDLSTNNLTGELPEAIGNLTGLSKLLLNGNKLSGRVPTGLSFLTNLESLDLSSNRF 645

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCS 231
           +        S+  L E+  SKN  +G    +  L++L  LDL  N++   IPS +S   S
Sbjct: 646 SSQIPQTFDSFLKLHEMNLSKNNFDGRIPGLTKLTQLTHLDLSHNQLDGEIPSQLSSLQS 705

Query: 232 LAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 290
           L +  + +N LS  +P     +  L                      + +D+SNN L G 
Sbjct: 706 LDKLNLSHNNLSGFIPTTFESMKAL----------------------TFIDISNNKLEGP 743

Query: 291 PPE 293
            P+
Sbjct: 744 LPD 746



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDG-FKDIPMLQILDLSYNIASLPENPPFSSLPH 476
           W      S  S+  L L +N +     D  F  +P L  +DLS N  S    P F +L  
Sbjct: 71  WYGVFCNSRGSIEKLNLTDNAIEGTFQDFPFSSLPNLASIDLSMNRFSGTIPPQFGNLSK 130

Query: 477 LQELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS 534
           L    L    L RE P  +  L+ L +LDL  N L   IP    N+ S+T L+LS N ++
Sbjct: 131 LIYFDLSTNHLTREIPPSLGNLKNLTVLDLHHNYLTGVIPPDLGNMESMTYLELSHNKLT 190

Query: 535 ALPP 538
              P
Sbjct: 191 GSIP 194


>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
 gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
          Length = 333

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 183/389 (47%), Gaps = 67/389 (17%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + SLP ++   S +S L + GN L  L +  I   T L  L  + N L  +PE +G L+ 
Sbjct: 8   LKSLPAEIGQLSDLSTLRLTGNMLFTLPSE-IGFLTSLKILKLNDNRLRSLPEEVGFLAS 66

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL---PAELGKLSKLGTLDLHSNQL 265
           LI LDL  N++ S+ + ++   SL   ++GNN LS+L   PAE+G+L+ L  L L +N+L
Sbjct: 67  LILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKL 126

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            +   E  QL RL+ L+L NN L+ LPPEIG+   L +L L+ N L TL + +    T  
Sbjct: 127 TDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLG 186

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LL                                    +L+   L+++P E W A  + K
Sbjct: 187 LL------------------------------------NLDNNQLTSLPLENWPATYLEK 210

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L LS N +  LP ++     L  L LSRN++   P  I   L+SL  L+L  N L  +P+
Sbjct: 211 LHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEI-GQLTSLQVLRLLVNKLTSLPA 269

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           +                            L  L++LYL   +L   P +I +L  L +LD
Sbjct: 270 E-------------------------IGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLD 304

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  N L S+P+    LTSL  L L +N +
Sbjct: 305 LQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 5/272 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL  L L  N +  L  ++  L  L +L ++ N+L  LP  +G L  L  LD+S N +  
Sbjct: 20  DLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASLILLDLSGNQLTS 79

Query: 106 IPDEIGSATALVKFDCSSNQ---LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  E+    +L      +NQ   L  LP+ +G+  +L++    NN +T LP ++    ++
Sbjct: 80  LNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQLERL 139

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++L+++ NKLT L    I  +  L EL  S N L  +P  IG +  L  L+L  N++ S+
Sbjct: 140 NRLNLDNNKLTTLPPE-IGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSL 198

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P        L + ++  N L+ LPA++G+   L  LDL  NQL     E  QL  L VL 
Sbjct: 199 PLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEIGQLTSLQVLR 258

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  N L+ LP EIG++ +LRKL L+ N L +L
Sbjct: 259 LLVNKLTSLPAEIGQLASLRKLYLSWNELTSL 290



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 118/219 (53%), Gaps = 2/219 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L + +NKL++LPA I +L  L  L++  N +  +P EIG    L +   S NQL  L
Sbjct: 116 LTELYLDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTL 175

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+   L      NN +TSLP +    + + KL + GNKLT L    I  +  L  L
Sbjct: 176 PAEIGQIYTLGLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAK-IGQFKDLWLL 234

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S+N L  +P  IG L+ L  L L  N++ S+P+ I    SL + Y+  N L++LPAE+
Sbjct: 235 DLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEI 294

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
           G+L+ L  LDL  NQL     E  QL  L +L L  N L
Sbjct: 295 GQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 166/357 (46%), Gaps = 59/357 (16%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG LS L  L L  N + ++PS I    SL    + +N L +LP E+G L+ L
Sbjct: 8   LKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASL 67

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNN---SLSGLPPEIGKMTTLRKLLLTGNPLR 311
             LDL  NQL     E  +L+ L  L + NN   SL+ LP EIG++T+L +L L  N L 
Sbjct: 68  ILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLT 127

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L + +V                                   RL+     L+L+   L+ 
Sbjct: 128 DLPAEIVQ--------------------------------LERLN----RLNLDNNKLTT 151

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI-----KDWPDAILTSL 426
           +P EI +  ++ +L LS N +  LP E+    +L  L L  N++     ++WP       
Sbjct: 152 LPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSLPLENWPA------ 205

Query: 427 SSLSCLKLDNNPLRQVPS--DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
           + L  L L  N L  +P+    FKD   L +LDLS N + +LP       L  LQ L L 
Sbjct: 206 TYLEKLHLSGNKLTTLPAKIGQFKD---LWLLDLSRNQLTTLPAE--IGQLTSLQVLRLL 260

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             +L   P +I +L  LR L LS N L S+P     LTSL  LDL  N ++++P E+
Sbjct: 261 VNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLDLQYNQLTSVPDEI 317



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 14/229 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L N  L D+P E+              +   L +L L +N +  L  ++     L  L
Sbjct: 119 LYLDNNKLTDLPAEIV-------------QLERLNRLNLDNNKLTTLPPEIGQFRDLGEL 165

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +SHN+L+ LPA IG+++ L  L++  N +  +P E   AT L K   S N+L  LP+ +
Sbjct: 166 TLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKI 225

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L     S N +T+LP ++   + +  L +  NKLT L    I     L +L  S 
Sbjct: 226 GQFKDLWLLDLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAE-IGQLASLRKLYLSW 284

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
           N L  +P  IG L+ L  LDL  N++ S+P  I    SL    +G N L
Sbjct: 285 NELTSLPAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T G LNL N  L  +P E              W A  L+KL L+ N +  L   +     
Sbjct: 184 TLGLLNLDNNQLTSLPLEN-------------WPATYLEKLHLSGNKLTTLPAKIGQFKD 230

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S N+L+ LPA IG+L  L+ L +  N +  +P EIG   +L K   S N+L  L
Sbjct: 231 LWLLDLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSL 290

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           P+ +G+  +L       N +TS+P+++   + +  L +  N+L
Sbjct: 291 PAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 8/186 (4%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    L ++P+EI +  +++ L L+ N +  LP E+    SL+ L L+ N+++  P+ 
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFSSLPHL 477
           +   L+SL  L L  N L  + ++    +  L  L +  N    + SLP       L  L
Sbjct: 61  V-GFLASLILLDLSGNQLTSLNAE-LARLKSLGYLHVGNNQLSSLTSLPAE--IGQLTSL 116

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            ELYL   +L + P +I++L++L  L+L  N L ++P        L EL LS N ++ LP
Sbjct: 117 TELYLDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLP 176

Query: 538 PELVSV 543
            E+  +
Sbjct: 177 AEIGQI 182


>gi|358339444|dbj|GAA47507.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 620

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 229/483 (47%), Gaps = 70/483 (14%)

Query: 50  LILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           L L+H  +++L   +  +LP LT L +  NKL+ LPA+IG+L  L+ L +  N + ++P 
Sbjct: 138 LDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARLPK 197

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+   T L   D   N+L+                       +LPE L    ++  L ++
Sbjct: 198 EMAKLTGLEVLDLRHNRLE----------------------GNLPECLPSLKQLKSLFLK 235

Query: 169 GNKLTVLSNNLIASWTMLTELIASKN-LLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            NKL+ +S   I +   LT L+  +N L N +P+ IG L+ L  LDL  N+I S+P +I 
Sbjct: 236 FNKLSNISG--IENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPENIG 293

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNN 285
            C +L    + +N L  LP  +G L  L  L +  NQL E    +  C L L   ++ +N
Sbjct: 294 NCTALKSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANCVL-LDEFNVESN 352

Query: 286 SLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED-SEAST 343
            LS LP E +  +  L  + L+       R+   + PT    ++ ++ +  N D ++ +T
Sbjct: 353 QLSSLPDELLLSLPNLVNITLS-------RNHFTDFPTGGPGQF-KNCISLNVDYNQITT 404

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             + + + ATRL+     L+L   N++  +PS++     + +L+L  N +  LP E+   
Sbjct: 405 IPQSIFSEATRLN----RLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGEL 460

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
             L+ L L+ N+++  PD I T LS L  L LD+N L  +P D                 
Sbjct: 461 QHLEVLELNFNQLRVLPDEI-TKLSKLRILGLDSNELESLPED----------------- 502

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                    S L  LQEL +   +L   P  +  L +L+++   +N +Q +P    N+++
Sbjct: 503 --------LSGLVSLQELNVLSNRLTTFPRSVENLPKLKVIKAGENDIQRLPPELGNMSA 554

Query: 523 LTE 525
           L E
Sbjct: 555 LQE 557



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 197/401 (49%), Gaps = 42/401 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK 105
           L+ L L  N +  +   + NL  LT L +  N L ++LP  IG+L  L +LD+S N I  
Sbjct: 229 LKSLFLKFNKLSNIS-GIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITS 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ IG+ TAL   +   NQL+ LP+S+G   NLS      N +  +P+ LA+C  + + 
Sbjct: 288 LPENIGNCTALKSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANCVLLDEF 347

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPS 224
           +VE N+L+ L + L+ S   L  +  S+N     P    G     I L++  N+I +IP 
Sbjct: 348 NVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLNVDYNQITTIPQ 407

Query: 225 SI-SGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           SI S    L    + +N ++ L P++L   S +  L+L SN+L     E  +L+ L VL+
Sbjct: 408 SIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLE 467

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L+ N L  LP EI K++ LR L L  N L +L                       ED   
Sbjct: 468 LNFNQLRVLPDEITKLSKLRILGLDSNELESLP----------------------EDLSG 505

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             + ++L  ++ RL+   + +     NL  +  ++ +AGE        N IQ LPPEL +
Sbjct: 506 LVSLQELNVLSNRLTTFPRSVE----NLPKL--KVIKAGE--------NDIQRLPPELGN 551

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            ++LQ L L+ N   +     L+   +L  L L+N PLR +
Sbjct: 552 MSALQELHLNDNLNLNSLPVELSLCKNLKILSLENCPLRDI 592



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 191/421 (45%), Gaps = 55/421 (13%)

Query: 152 LPEDLADC--SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           L  +LA+C  SK + LD+   +L  L N +      LTEL    N L  +P +IG L+ L
Sbjct: 123 LYRELAECRESKNNVLDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHL 182

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEY 268
            RL + QN +  +P  ++    L    + +N L   LP  L  L +L +L L  N+L   
Sbjct: 183 RRLSIQQNMLARLPKEMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNI 242

Query: 269 ----------CVEACQ--------------LRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                     C+   Q                L+ LDLSNN ++ LP  IG  T L+ L 
Sbjct: 243 SGIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPENIGNCTALKSLN 302

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L+ L +S+ N      L+ L         S+ S     L+ +   L+  V   E 
Sbjct: 303 LQHNQLQRLPNSIGN------LRNL---------SKLSIKYNQLVEIPQSLANCVLLDEF 347

Query: 363 SLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPP----ELSSCASLQTLILSRNKIKD 417
           ++E   LS++P E+      +  + LSRN   + P     +  +C SL    +  N+I  
Sbjct: 348 NVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLN---VDYNQITT 404

Query: 418 WPDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
            P +I +  + L+ L L DNN    VPSD      ++++   S  + SLP       L H
Sbjct: 405 IPQSIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAE--IGELQH 462

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ L L   QLR  P +I +L +LRIL L  N L+S+PE    L SL EL++  N ++  
Sbjct: 463 LEVLELNFNQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTF 522

Query: 537 P 537
           P
Sbjct: 523 P 523



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 38/293 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL +  L+ +PN +                 +L KL + +N + ++ + L N  LL  
Sbjct: 300 SLNLQHNQLQRLPNSI-------------GNLRNLSKLSIKYNQLVEIPQSLANCVLLDE 346

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
            NV  N+LS LP  +               ++ +P+       LV    S N   + P+ 
Sbjct: 347 FNVESNQLSSLPDEL---------------LLSLPN-------LVNITLSRNHFTDFPTG 384

Query: 133 L-GRCLNLSDFKASNNCITSLPEDL-ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             G+  N        N IT++P+ + ++ +++++L++  N +T L  + +  W+ + EL 
Sbjct: 385 GPGQFKNCISLNVDYNQITTIPQSIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELN 444

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P  IG L  L  L+L+ N++  +P  I+    L    + +N L +LP +L 
Sbjct: 445 LGSNRLTSLPAEIGELQHLEVLELNFNQLRVLPDEITKLSKLRILGLDSNELESLPEDLS 504

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  L  L++ SN+L  +      L +L V+    N +  LPPE+G M+ L++
Sbjct: 505 GLVSLQELNVLSNRLTTFPRSVENLPKLKVIKAGENDIQRLPPELGNMSALQE 557



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDW 418
           + LS++   L+ +P E+ +   +  LDL  N ++  LP  L S   L++L L  NK+ + 
Sbjct: 183 RRLSIQQNMLARLPKEMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNI 242

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
             + + +L  L+CL L  N L+    D    +  L  LDLS N I SLPEN    +   L
Sbjct: 243 --SGIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPEN--IGNCTAL 298

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + L L+  QL+  P  I  L+ L  L +  N L  IP+   N   L E ++  N +S+LP
Sbjct: 299 KSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANCVLLDEFNVESNQLSSLP 358

Query: 538 PELV 541
            EL+
Sbjct: 359 DELL 362



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 455 ILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           +LDLS+  +  LP N  F  LP L ELYL   +L   P  I +L  LR L + QN L  +
Sbjct: 137 VLDLSHCELQQLP-NGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARL 195

Query: 514 PEGFKNLTSLTELDLSDNNISALPPE 539
           P+    LT L  LDL  N +    PE
Sbjct: 196 PKEMAKLTGLEVLDLRHNRLEGNLPE 221



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 48/194 (24%)

Query: 41  WWEAVDLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           + EA  L +L L  NNI  L   DL +   +  LN+  N+L+ LPA IGEL  L+ L+++
Sbjct: 410 FSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLELN 469

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQL--------------------------------- 126
           FN +  +PDEI   + L      SN+L                                 
Sbjct: 470 FNQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFPRSVENL 529

Query: 127 -------------KELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
                        + LP  LG    L +     N  + SLP +L+ C  +  L +E   L
Sbjct: 530 PKLKVIKAGENDIQRLPPELGNMSALQELHLNDNLNLNSLPVELSLCKNLKILSLENCPL 589

Query: 173 TVLSNNLIASWTML 186
             +  N++   + +
Sbjct: 590 RDIERNVVEGGSAM 603


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 184/398 (46%), Gaps = 43/398 (10%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           K SN+ + +LP+++     +  LD+  N+L  L    I     L +L  ++N L  +PE 
Sbjct: 152 KNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKE-IGKLQNLQKLNLTRNRLANLPEE 210

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++ ++P  I    +L    + NN L+ LP E+GKL KL  L L +
Sbjct: 211 IGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLEN 270

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  +L+ L  L LSNN L+ LP EIGK+  L++L L  N L TL        
Sbjct: 271 NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTL-------- 322

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++      D    TT  + I    +L    K+L   G   + +P EIW    
Sbjct: 323 -PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKL----KKLYSSGNQFTTVPEEIWNLQN 377

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L+L  N +  LP E+ +  +LQ L LS N++   P  I   L +L  L L +N L  
Sbjct: 378 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEI-GKLQNLQLLYLSDNQLTT 436

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           +P    K+I  LQ                     +LQELYLR  QL   P +I  LQ L 
Sbjct: 437 LP----KEIGKLQ---------------------NLQELYLRDNQLTTLPKEIENLQSLE 471

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            L LS N L S PE    L  L    L   NI  L P+
Sbjct: 472 YLYLSDNPLTSFPEEIGKLQHLKWFRLE--NIPTLLPQ 507



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 188/419 (44%), Gaps = 51/419 (12%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA-------HNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           VY N  EA +        D+Q L L        ++ +  L +++  L  L  L++S N+L
Sbjct: 127 VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 181

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ L+++ N +  +P+EIG    L +   + NQL  LP  + +  NL 
Sbjct: 182 MTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQ 241

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN +T+LP+++    K+  L +E N+LT L    I     L  L  S N L  +P
Sbjct: 242 WLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGKLQNLQWLGLSNNQLTTLP 300

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L L  N++ ++P  I    +L E  +  N L+ LP E+ KL KL  L  
Sbjct: 301 KEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYS 360

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQ      E   L+ L  L+L +N L+ LP EIG +  L+ L L+ N L TL      
Sbjct: 361 SGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKE--- 417

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                        I     L +    L L    L+ +P EI + 
Sbjct: 418 -----------------------------IGKLQNLQL----LYLSDNQLTTLPKEIGKL 444

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             + +L L  N +  LP E+ +  SL+ L LS N +  +P+ I   L  L   +L+N P
Sbjct: 445 QNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEI-GKLQHLKWFRLENIP 502



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+ K               +LQKL L  N +  L E++  L  L  L
Sbjct: 174 LDLSSNQLMTLPKEIGK-------------LQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ LP  I +L  L+ L ++ N +  +P EIG    L      +NQL  LP  +
Sbjct: 221 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     SNN +T+LP+++     + +L +E N+LT L    I     L EL    
Sbjct: 281 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKE-IGKLQNLQELRLDY 339

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE I  L +L +L    N+  ++P  I    +L    + +N L++LP E+G L 
Sbjct: 340 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 399

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  +L+ L +L LS+N L+ LP EIGK+  L++L L  N L T
Sbjct: 400 NLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTT 459

Query: 313 LRSSLVN 319
           L   + N
Sbjct: 460 LPKEIEN 466



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 16/310 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E    D     +        +LQ L L +N +  L +
Sbjct: 196 KLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 255

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L++ +N+L+ LP  IG+L  L+ L +S N +  +P EIG    L +    
Sbjct: 256 EIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLE 315

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL + +   N +T+LPE++    K+ KL   GN+ T +   +   
Sbjct: 316 NNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI--- 372

Query: 183 WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           W +  L  L    N L  +P+ IG+L  L  L L  N++ ++P  I    +L   Y+ +N
Sbjct: 373 WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 432

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+GKL  L  L L  NQL     E   L+ L  L LS+N L+  P EIGK+  
Sbjct: 433 QLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQH 492

Query: 300 LRKLLLTGNP 309
           L+   L   P
Sbjct: 493 LKWFRLENIP 502



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 161/344 (46%), Gaps = 42/344 (12%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L  LDL  N+++++P  I    +L +  +  N L+ LP E+GKL  L  L
Sbjct: 161 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L  NQL     E  +L+ L  L L+NN L+ LP EIGK+  L  L L  N L TL   +
Sbjct: 221 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 280

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G    L                                  + L L    L+ +P EI 
Sbjct: 281 --GKLQNL----------------------------------QWLGLSNNQLTTLPKEIG 304

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   + +L L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L    N
Sbjct: 305 KLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEI-EKLQKLKKLYSSGN 363

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
               VP + + ++  LQ L+L  N + SLP+     +L +LQ LYL   QL   P +I +
Sbjct: 364 QFTTVPEEIW-NLQNLQALNLYSNQLTSLPKE--IGNLQNLQLLYLSDNQLATLPKEIGK 420

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LQ L++L LS N L ++P+    L +L EL L DN ++ LP E+
Sbjct: 421 LQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEI 464


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 176/383 (45%), Gaps = 64/383 (16%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 43  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 161

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 162 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 221

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                             R  
Sbjct: 282 LQNLQELNLEYN---------------------------------------------RFE 296

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              KE++ +  NL  +              LSRN +  LP E+     L++L L  N++ 
Sbjct: 297 AFPKEIT-QFQNLQKL-------------HLSRNQLTTLPKEIGRLQKLESLGLDHNQLA 342

Query: 417 DWPDAILTSLSSLSCLKLDNNPL 439
             P+ I   L +L  L L NNPL
Sbjct: 343 TLPEEI-KQLKNLKKLYLHNNPL 364



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 152/303 (50%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 56  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 162

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 221

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L  L LS N L+ LP EIG++  L  L L  N L
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 341

Query: 311 RTL 313
            TL
Sbjct: 342 ATL 344



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 182/403 (45%), Gaps = 74/403 (18%)

Query: 139 LSDFKASNN------CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L+ F A  N        T+L E L + +++  LD+  +KL +L                 
Sbjct: 24  LTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKIL----------------- 66

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+L
Sbjct: 67  -------PKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQL 119

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L 
Sbjct: 120 QNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL- 178

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--L 369
                              + LPE      S  K                LSL G N   
Sbjct: 179 -------------------TILPEEIGQLESLRK----------------LSLGGKNKPF 203

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +L
Sbjct: 204 TILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKNL 262

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
             L L  N L  +P +    +  LQ L+L YN   + P+    +   +LQ+L+L R QL 
Sbjct: 263 LVLDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKE--ITQFQNLQKLHLSRNQLT 319

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 320 TLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 362



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 39/276 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L  +P E+              +  +L+ L L +N +  L E++  L  L  
Sbjct: 101 ELHLQNNQLTTLPEEI-------------GQLQNLKVLHLNNNQLTTLPEEIGKLQNLQE 147

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS--------- 123
           LN+  N+L+ LP  IG L  L+ L +S N +  +P+EIG   +L K              
Sbjct: 148 LNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILP 207

Query: 124 ----------------NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                           N+L  LP  +G+  NL       N +T LP+++     +  LD+
Sbjct: 208 KEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDL 267

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+LT+L    I     L EL    N     P+ I     L +L L +N++ ++P  I 
Sbjct: 268 SGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIG 326

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
               L    + +N L+ LP E+ +L  L  L LH+N
Sbjct: 327 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 362



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 143/324 (44%), Gaps = 71/324 (21%)

Query: 229 CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 21  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 80

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             NN L+ LP EIGK+  L++L L  N L TL                    PE      
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTL--------------------PEE----- 115

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 116 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 164

Query: 402 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P    K+I  LQ     
Sbjct: 165 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILP----KEITQLQ----- 214

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                           +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 215 ----------------NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L  LDLS N ++ LP E+  +
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQL 282



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 24/176 (13%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L +L++  N+L+ LP  IG+L  L  LD+S N +  
Sbjct: 215 NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L + +   N+ +  P  + +  NL     S N +T+LP+++    K+  L
Sbjct: 275 LPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESL 334

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            ++ N+L  L                        PE I  L  L +L LH N +LS
Sbjct: 335 GLDHNQLATL------------------------PEEIKQLKNLKKLYLHNNPLLS 366


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 85  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 145 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 204

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 205 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 263

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 324 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 383

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 384 KLYLHNNPL 392



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 171/369 (46%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 191

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 192 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 251

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 252 NKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT--------- 302

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P+++ +   
Sbjct: 303 -----------LPEN------------IGQLQRLQT----LYLGNNQLNVLPNKLEQLQN 335

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 336 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 392

Query: 442 VPSDGFKDI 450
            PS+  + I
Sbjct: 393 -PSEKIERI 400



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 38  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 91

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 92  QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 151

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 152 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 211

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 212 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 258

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 259 KEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI-GQLQRLQTLY 317

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 318 LGNNQLNVLPNK-LEQLQNLESLDLEHN------------------------QLNALPKE 352

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 353 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 390



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 173/404 (42%), Gaps = 73/404 (18%)

Query: 171 KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 12  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 71

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 72  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 131

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 132 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 177

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 178 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 215

Query: 400 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 437
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 216 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 275

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 276 QLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKLEQ 332

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 333 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 376



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L E++  L  L  L + +N+L+ LP  + +L  L+SLD+  N +  
Sbjct: 289 NLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 348

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L   +   NQL  LP  + +  NL      NN + S
Sbjct: 349 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 394


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS    + +P E+              +  +L+KL L+ N I+ + +++  L  L  
Sbjct: 24  TLDLSANRFKTLPKEI-------------GQLKNLRKLNLSANQIKTIPKEIEKLQKLQS 70

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S NQ+K +P  
Sbjct: 71  LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKK 130

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  LD+  N+LT L    I     L +L   
Sbjct: 131 IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHLQNLQDLYLV 189

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+G+L
Sbjct: 190 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQL 249

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 250 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 308



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L++S N I  IP EI     L      +NQL  LP 
Sbjct: 24  TLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQ 83

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+   L       N +T+LP+++     +  L++  N++  +    I     L  L  
Sbjct: 84  EIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKK-IEKLQKLQSLGL 142

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL  NR+ ++P  I    +L + Y+ +N L+ LP E+G+
Sbjct: 143 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 202

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L
Sbjct: 203 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 262

Query: 311 RTL 313
            TL
Sbjct: 263 TTL 265



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN+S N++  +P  I +L  L+SL +  N +  +P EIG
Sbjct: 27  LSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 86

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+  NL     S N I ++P+ +    K+  L ++ N+
Sbjct: 87  QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQ 146

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L  L  S N L  +P+ IG L  L  L L  N++  +P+ I    +
Sbjct: 147 LTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKN 205

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + NN L+ L  E+ +L  L +LDL SNQL  +  E  QL+ L VLDL +N L+ L
Sbjct: 206 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTL 265

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 266 PEGIGQLKNLQTLDLDSNQLTTL 288



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 113 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 172

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 173 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 232

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 233 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 291

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 292 IGQLQNLQELFLNNNQLSS 310



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 149/330 (45%), Gaps = 63/330 (19%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L +  +  N +  +P E+ KL KL +L L +NQL     E
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE 84

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL +L  L L  N L+ LP EIG++  L+ L L+ N ++T+   +        L+ L+
Sbjct: 85  IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEK------LQKLQ 138

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                              L L+   L+ +P EI +   +  LDLS N
Sbjct: 139 S------------------------------LGLDNNQLTTLPQEIGQLQNLQSLDLSTN 168

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+I
Sbjct: 169 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KEI 223

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
             LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N L
Sbjct: 224 EQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 262

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 263 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 292



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L       +P EI +   + KL+LS N I+ +P 
Sbjct: 2   QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPK 60

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+     LQ+L L  N++   P  I   L  L  L L  N L  +P +    +  L+ L+
Sbjct: 61  EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 118

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           LSYN I ++P+      L  LQ L L   QL   P +I +LQ L+ LDLS N L ++P+ 
Sbjct: 119 LSYNQIKTIPKK--IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 176

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             +L +L +L L  N ++ LP E+
Sbjct: 177 IGHLQNLQDLYLVSNQLTILPNEI 200


>gi|440297287|gb|ELP89981.1| leucine-rich repeat-containing protein 33 precursor, putative
           [Entamoeba invadens IP1]
          Length = 858

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 242/509 (47%), Gaps = 71/509 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N+++K  + ++ L  LT LN+S N+++++    G +  L+ +D+S N I+ I
Sbjct: 73  LKTLDLSSNHLKKFSKSIK-LTSLTELNMSINQITKISDEFGTMQALRYIDMSINRILAI 131

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +   + L   D S+N L   P+ L     L   K  +N I ++P  ++  + +  LD
Sbjct: 132 PKHMSKLSNLTFIDMSNNLLNNFPTPLLELTGLVVLKVKDNKIATIPNGMSKMASLQILD 191

Query: 167 VEGN----------KLTVLS------------NNLIASWTMLTELIASKNLLNGMPETIG 204
           +  N          KLT LS            N+ IA+ T + E+  S +LL  +P++  
Sbjct: 192 ISNNRIDKITPSLCKLTKLSVLDVSANPVNEINDQIANLTTIKEINFSYSLLKTLPKSFM 251

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           SL  L +L L    +   PS +    +++E  + N  L     ++ +L K G +DL SNQ
Sbjct: 252 SLIGLKKLTLQHTSVKVPPSGLQKFTNVSELNLSNGELE----KVTELPKSGDIDLSSNQ 307

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           + E  +   +  +  L+LS+N L    P I K++ ++ L++  N L         G  P 
Sbjct: 308 IVEMDLPEMEYGIHKLNLSSNKLKDF-PNIKKLSVIKTLIIQKNML---------GSVP- 356

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                E+++T  T L+    EL L   + ++ P  I     + +
Sbjct: 357 ---------------------EEMLT-GTSLT----ELDLSSNSFNSFPMAITTCTNLVR 390

Query: 385 LDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           L++S N +  LP    SC A L+ L+L  N I   PD  ++ L++L+ L L++N L ++P
Sbjct: 391 LNMSNNYLDSLPDISYSCLAKLEELLLGINIIDRLPDT-MSELTNLTSLHLEHNKLSKIP 449

Query: 444 SDGFKDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
              F    M +++ L  N   +PE P  FS L +L+ L L    +++  T I  L  ++ 
Sbjct: 450 ESLFS---MGRLVGLFLNCNQIPELPEKFSLLTNLEMLELSCNFIKDV-TPITNLVAIKD 505

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           LDLS N + + P    ++TSL  LDLS N
Sbjct: 506 LDLSTNEILTCPSNLCSMTSLKSLDLSYN 534



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 237/531 (44%), Gaps = 76/531 (14%)

Query: 75  VSHNK-LSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V H K L E P+     E+  L S+D+S N I ++P +I S   L K   + N +K LP+
Sbjct: 7   VKHAKNLIEFPSEEVKKEIKNLVSIDISMNRIQELPSQINSLPKLQKLRANDNMIKTLPN 66

Query: 132 SLG---------------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +                      +  +L++   S N IT + ++      +  +D+  N
Sbjct: 67  QINIPTLKTLDLSSNHLKKFSKSIKLTSLTELNMSINQITKISDEFGTMQALRYIDMSIN 126

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  +  ++ +  + LT +  S NLLN  P  +  L+ L+ L +  N+I +IP+ +S   
Sbjct: 127 RILAIPKHM-SKLSNLTFIDMSNNLLNNFPTPLLELTGLVVLKVKDNKIATIPNGMSKMA 185

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           SL    + NN +  +   L KL+KL  LD+ +N + E   +   L  +  ++ S + L  
Sbjct: 186 SLQILDISNNRIDKITPSLCKLTKLSVLDVSANPVNEINDQIANLTTIKEINFSYSLLKT 245

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPE 335
           LP     +  L+KL        TL+ + V  P   L K+                + LP+
Sbjct: 246 LPKSFMSLIGLKKL--------TLQHTSVKVPPSGLQKFTNVSELNLSNGELEKVTELPK 297

Query: 336 NEDSEASTTK---EDLITMA-------------------TRLSVTSKELSLEGMNLSAIP 373
           + D + S+ +    DL  M                     +LSV  K L ++   L ++P
Sbjct: 298 SGDIDLSSNQIVEMDLPEMEYGIHKLNLSSNKLKDFPNIKKLSVI-KTLIIQKNMLGSVP 356

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            E+     +T+LDLS NS    P  +++C +L  L +S N +   PD   + L+ L  L 
Sbjct: 357 EEMLTGTSLTELDLSSNSFNSFPMAITTCTNLVRLNMSNNYLDSLPDISYSCLAKLEELL 416

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N + ++P D   ++  L  L L +N ++ +PE+    S+  L  L+L   Q+ E P 
Sbjct: 417 LGINIIDRLP-DTMSELTNLTSLHLEHNKLSKIPES--LFSMGRLVGLFLNCNQIPELPE 473

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               L  L +L+LS N ++ +     NL ++ +LDLS N I   P  L S+
Sbjct: 474 KFSLLTNLEMLELSCNFIKDVTP-ITNLVAIKDLDLSTNEILTCPSNLCSM 523



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 196/479 (40%), Gaps = 94/479 (19%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LSN +  D+ N +  NF          E   L  L +  N I  +   +  +  L +L++
Sbjct: 138 LSNLTFIDMSNNLLNNFPTP-----LLELTGLVVLKVKDNKIATIPNGMSKMASLQILDI 192

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL------ 129
           S+N++ ++  ++ +L  L  LDVS N + +I D+I + T + + + S + LK L      
Sbjct: 193 SNNRIDKITPSLCKLTKLSVLDVSANPVNEINDQIANLTTIKEINFSYSLLKTLPKSFMS 252

Query: 130 -----------------PSSLGRCLNLSDFKASNN---CITSLPE----DLA-------D 158
                            PS L +  N+S+   SN     +T LP+    DL+       D
Sbjct: 253 LIGLKKLTLQHTSVKVPPSGLQKFTNVSELNLSNGELEKVTELPKSGDIDLSSNQIVEMD 312

Query: 159 CSKM----SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
             +M     KL++  NKL    N  I   +++  LI  KN+L  +PE + + + L  LDL
Sbjct: 313 LPEMEYGIHKLNLSSNKLKDFPN--IKKLSVIKTLIIQKNMLGSVPEEMLTGTSLTELDL 370

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEAC 273
             N   S P +I+ C +L    M NN L +LP      L+KL  L L  N +        
Sbjct: 371 SSNSFNSFPMAITTCTNLVRLNMSNNYLDSLPDISYSCLAKLEELLLGINIIDRLPDTMS 430

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L  L+ L L +N LS +P  +  M  L  L L  N +                      
Sbjct: 431 ELTNLTSLHLEHNKLSKIPESLFSMGRLVGLFLNCNQI--------------------PE 470

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           LPE         K  L+T    L     ELS    N     + I     I  LDLS N I
Sbjct: 471 LPE---------KFSLLTNLEML-----ELSC---NFIKDVTPITNLVAIKDLDLSTNEI 513

Query: 393 QELPPELSSCASLQTLILSRN----KIKDWP---DAILTSLSSLSCLKLDNNPLRQVPS 444
              P  L S  SL++L LS N      +++P    + LT L++  C   D   L +  S
Sbjct: 514 LTCPSNLCSMTSLKSLDLSYNGDFSSTENFPMFFASTLTRLTNFHCTINDKVKLNKFAS 572



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 40/251 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+D PN                                     ++ L ++  L
Sbjct: 323 LNLSSNKLKDFPN-------------------------------------IKKLSVIKTL 345

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N L  +P  +     L  LD+S NS    P  I + T LV+ + S+N L  LP   
Sbjct: 346 IIQKNMLGSVPEEMLTGTSLTELDLSSNSFNSFPMAITTCTNLVRLNMSNNYLDSLPDIS 405

Query: 134 GRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             CL  L +     N I  LP+ +++ + ++ L +E NKL+ +  +L  S   L  L  +
Sbjct: 406 YSCLAKLEELLLGINIIDRLPDTMSELTNLTSLHLEHNKLSKIPESLF-SMGRLVGLFLN 464

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +PE    L+ L  L+L  N I  + + I+   ++ +  +  N +   P+ L  +
Sbjct: 465 CNQIPELPEKFSLLTNLEMLELSCNFIKDV-TPITNLVAIKDLDLSTNEILTCPSNLCSM 523

Query: 253 SKLGTLDLHSN 263
           + L +LDL  N
Sbjct: 524 TSLKSLDLSYN 534


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 171/369 (46%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 205

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 206 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 265

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 266 NKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT--------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P+++ +   
Sbjct: 317 -----------LPEN------------IGQLQRLQT----LYLGNNQLNVLPNKLEQLQN 349

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 350 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 406

Query: 442 VPSDGFKDI 450
            PS+  + I
Sbjct: 407 -PSEKIERI 414



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 KEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNVLPNK-LEQLQNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 160/369 (43%), Gaps = 63/369 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L  L+L  N+++++P  I    +L + ++  N L ALP E+G+L  L
Sbjct: 61  LTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNL 120

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L+ NQL     E  QL+ L  L+L++N L+ LP +I ++  L+ L L  N   ++ 
Sbjct: 121 QKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSIL 180

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L+ L S                              L L+   L+ +P 
Sbjct: 181 KEI------GQLQNLES------------------------------LGLDHNQLNVLPK 204

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------------ 422
           EI +   +  L L  N +  LP E+    +LQ L L  N++   P  I            
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 423 ----------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
                     +  L +L  LKL  N L  +P +    +  LQ LDL  N + +LPEN   
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--I 321

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L  LQ LYL   QL   P  + +LQ L  LDL  N L ++P+    L  L  L+L  N
Sbjct: 322 GQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYN 381

Query: 532 NISALPPEL 540
            ++ LP E+
Sbjct: 382 QLATLPEEI 390


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 176/389 (45%), Gaps = 66/389 (16%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +LN+S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + ++ +++     + KL ++ N+LT                          P+ IG L 
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLT------------------------AFPKEIGKLQ 185

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++ + P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL  
Sbjct: 186 NLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT 245

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L +L  L+L  N L+ +P EIG++  L+ L L+ N  +T+         P   
Sbjct: 246 IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEF 296

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L++                            K LSL+   L+A+P EI +   +  L+
Sbjct: 297 GQLKNL---------------------------KMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKI 415
           L  N +  +P E+    +LQTL L  N+ 
Sbjct: 330 LDANQLITIPKEIGQLQNLQTLYLRNNQF 358



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 144/302 (47%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+         + N+++     K  E +  L KL L++N +  L  +
Sbjct: 75  LNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVE 134

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+ +N+L  +   I +L  L+ L +  N +   P EIG    L     S+
Sbjct: 135 IGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSN 194

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL   P  +G+  NL +   SNN +T+ P+++    K+  L +  N+LT + N  I   
Sbjct: 195 NQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNE-IGKL 253

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L L  N+  +IP       +L    +  N L+
Sbjct: 254 QKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLT 313

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ALP E+GKL  L  L+L +NQL     E  QL+ L  L L NN  S     I +   +RK
Sbjct: 314 ALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRK 368

Query: 303 LL 304
           LL
Sbjct: 369 LL 370



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 150/346 (43%), Gaps = 39/346 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   + S NQL  LP  + +  NL +   + N   + 
Sbjct: 49  VRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 109 PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 144

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E 
Sbjct: 145 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 204

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 255

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
               N D    TT    I     L V    L L       IP E  +   +  L L  N 
Sbjct: 256 LQELNLDVNQLTTIPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQ 311

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +  LP E+    +L+ L L  N++   P  I   L +L  L L NN
Sbjct: 312 LTALPKEIGKLKNLKMLNLDANQLITIPKEI-GQLQNLQTLYLRNN 356



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 146/352 (41%), Gaps = 84/352 (23%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +PE IG L  L  L+L  N+++ +P  I    +L E ++  N     P E
Sbjct: 52  LILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 111

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 112 IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+T+   +                            E L  +        ++L L+   
Sbjct: 150 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 173

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 174 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 232

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 233 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 267

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 319



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L A+P +I +   +  L+LS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQEL 98

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 216 SNNQLTTFPKEI 227


>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
           SHOC-2-like [Cavia porcellus]
          Length = 584

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 208/436 (47%), Gaps = 56/436 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IG+L  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                         P  + YL+                          +   +L L    
Sbjct: 459 XFDH---------CPNEIAYLK-------------------------DLQXNKLVLTNNQ 484

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLS 427
           L+ +P  I     +T L L  N +  LP E+ +  +L+ L L+ N  +   P   L   S
Sbjct: 485 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE-LALCS 543

Query: 428 SLSCLKLDNNPLRQVP 443
            LS + ++N PL  +P
Sbjct: 544 KLSIMSIENCPLSHLP 559



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 219/455 (48%), Gaps = 28/455 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQ--ELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +  L+ LDL  N      N   + L  LQ  +L L   QL   P  I  L  L  L L +
Sbjct: 447 LRKLRELDLEENXFDHCPNE-IAYLKDLQXNKLVLTNNQLTTLPRGIGHLTNLTHLGLGE 505

Query: 508 NSLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
           N L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 506 NLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 540



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP
Sbjct: 219 MLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 277



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 39/205 (19%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV--KFDC 121
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N     P+EI     L   K   
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDHCPNEIAYLKDLQXNKLVL 480

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LA 157
           ++NQL  LP  +G   NL+      N +T LPE+                        LA
Sbjct: 481 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 540

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIAS 182
            CSK+S + +E   L+ L   ++A 
Sbjct: 541 LCSKLSIMSIENCPLSHLPPQIVAG 565


>gi|413953384|gb|AFW86033.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 550

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 232/485 (47%), Gaps = 51/485 (10%)

Query: 73  LNVSH-NKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KEL 129
           LN+S+ N   E+  AIG+L  L+ +D+  N +  +IPDEIG   +L   D S N L  ++
Sbjct: 77  LNLSNLNLGGEISPAIGQLKSLQFVDLKLNKLTGQIPDEIGDCVSLKYLDLSGNLLYGDI 136

Query: 130 PSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P S+ +   L D    NN +T  +P  L+    +  LD+  NKLT     LI    +L  
Sbjct: 137 PFSISKLKQLEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQY 196

Query: 189 LIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-L 245
           L    N L G +   +  L+ L   D+  N +  +IP  I  C S     +  N +S  +
Sbjct: 197 LGLRGNSLTGTLSPDMCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEI 256

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRK 302
           P  +G L ++ TL L  N+L     E   L   L+VLDLS N L G +PP +G ++   K
Sbjct: 257 PYNIGYL-QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK 315

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L         G  P  L  + S+L                   + L +   EL
Sbjct: 316 LYLHGNKLT--------GHIPPELGNM-SKL-------------------SYLQLNDNEL 347

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
                 +  IP+E+ +  E+ +L+L+ N+++  +P  +SSC++L    +  N++     A
Sbjct: 348 ------VGTIPAELGKLTELFELNLANNNLEGHIPANISSCSALNKFNVYGNRLNGSIPA 401

Query: 422 ILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
               L SL+ L L +N  + Q+PS+    I  L  LDLSYN  S P  P    L HL EL
Sbjct: 402 GFQKLESLTYLNLSSNSFKGQIPSE-LGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLEL 460

Query: 481 YLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LP 537
            L +  L    P +   L+ ++++D+S N+L   +PE    L +L  L L++N+++  +P
Sbjct: 461 NLSKNHLTGSVPAEFGNLRSVQVIDMSSNNLSGYLPEELGQLQNLDSLILNNNSLAGEIP 520

Query: 538 PELVS 542
            +L +
Sbjct: 521 AQLAN 525



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 190/406 (46%), Gaps = 35/406 (8%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ LIL +N +   +   L  +P L  L+++ NKL+ ++P  I    +L+ L +  NS+ 
Sbjct: 146 LEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQYLGLRGNSLT 205

Query: 105 KI--PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
               PD +   T L  FD   N L   +P  +G C +      S N I+  +P ++    
Sbjct: 206 GTLSPD-MCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEIPYNIGYL- 263

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
           +++ L ++GN+L      +I     L  L  S+N L G +P  +G+LS   +L LH N++
Sbjct: 264 QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKL 323

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYC---VEACQ 274
              IP  +     L+   + +N L   +PAELGKL++L  L+L +N L+ +    + +C 
Sbjct: 324 TGHIPPELGNMSKLSYLQLNDNELVGTIPAELGKLTELFELNLANNNLEGHIPANISSCS 383

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-- 331
             L+  ++  N L+G +P    K+ +L  L L+ N  +        G  P+ L ++ +  
Sbjct: 384 -ALNKFNVYGNRLNGSIPAGFQKLESLTYLNLSSNSFK--------GQIPSELGHIVNLD 434

Query: 332 --RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L  NE S         +     L+++   L+       ++P+E      +  +D+S 
Sbjct: 435 TLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLT------GSVPAEFGNLRSVQVIDMSS 488

Query: 390 NSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           N++   LP EL    +L +LIL+ N +     A L +  SL  L +
Sbjct: 489 NNLSGYLPEELGQLQNLDSLILNNNSLAGEIPAQLANCFSLVSLYV 534


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 203/435 (46%), Gaps = 34/435 (7%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LSN++L  +P EV+             E  +++ L+L  N++E L  ++  LP L  LNV
Sbjct: 1   LSNKNLETIPQEVF-------------EIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNV 47

Query: 76  SHN-KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           S+N +L +LP  +G    L  + +   S+ +IP  + S   L   D   N+L+ +P  + 
Sbjct: 48  SNNHRLEDLPDEVGNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDIS 107

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
               L +   + N + SLP+ +     + KL +  NKLT L + L  +   L EL    N
Sbjct: 108 NLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDEL-GNLLFLRELWLRDN 166

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P +IG +  L+RL+L +N++  +P  +    SL    +  N L ++PA++G+LS 
Sbjct: 167 KLMTLPASIGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSN 226

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  N+L +   + C L  L  L +  N +   P  + +++ L  L    N +  L
Sbjct: 227 LEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFL 286

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL----EGMNL 369
              +        L+YLR      E S AS   ED       L+   K L L     G   
Sbjct: 287 PRDI------GKLRYLR------ELSIASNEFEDFPEEVLDLTSLEK-LYLGQWGGGEKF 333

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + IP EI     +  L L  N+ + +P  + +   L+ L L  NK++  PD I + L +L
Sbjct: 334 TVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNI-SFLRNL 392

Query: 430 SCLKLDNNPLRQVPS 444
             L +  N L+++P+
Sbjct: 393 RSLDVGTNRLKRLPT 407



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 200/437 (45%), Gaps = 67/437 (15%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC-ITSLPEDLADCSKMSK 164
           IP E+     +       N L+ LP  +G   NL     SNN  +  LP+++ +  K++ 
Sbjct: 9   IPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEVGNAQKLAH 68

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +                       LI     L  +P  + SL  L  LDL +N++ SIP 
Sbjct: 69  IS----------------------LIHCS--LQQIPAVVLSLKGLDILDLDRNKLQSIPD 104

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            IS    L E ++  N L +LP  +G L                      + L  L LS 
Sbjct: 105 DISNLQVLRELWLTGNQLESLPDSIGLL----------------------MNLQKLGLSR 142

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP E+G +  LR+L L  N L TL +S+       ++  LR  L EN+    +  
Sbjct: 143 NKLTSLPDELGNLLFLRELWLRDNKLMTLPASI-----GEMVNLLRLNLEENK---LTYL 194

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E++  M + L      L LEG NL +IP++I +   + +L LS N + +LP ++ +  +
Sbjct: 195 PEEMGKMESLLV-----LRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLEN 249

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L + +N+I+++P+  L+ LS+L  L  + N +  +P D  K   + ++   S     
Sbjct: 250 LKELAMGKNRIEEFPEG-LSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFED 308

Query: 465 LPENPPFSSLPHLQELYLRRMQLREA----PTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            PE      L  L++LYL +    E     P +I  L +LR+L L  N+ +++P+  +NL
Sbjct: 309 FPEE--VLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENL 366

Query: 521 TSLTELDLSDNNISALP 537
             L EL L  N + ALP
Sbjct: 367 RHLRELYLDHNKLEALP 383



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 173/388 (44%), Gaps = 44/388 (11%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N ++ + +D+ NL +L  L ++ N+L  LP +IG L  L+ L +S N +  +PDE+G
Sbjct: 94  LDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELG 153

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L +     N+L  LP+S+G  +NL       N +T LPE++     +  L +EGN 
Sbjct: 154 NLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNN 213

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  +    I   + L EL  S+N L  +PE + +L  L  L + +NRI   P  +S   +
Sbjct: 214 LRSIPAQ-IGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSN 272

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL----SNNS 286
           L   +   N ++ LP ++GKL  L  L + SN+ +++  E   L  L  L L        
Sbjct: 273 LESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEK 332

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            + +P EIG +  LR L L  N  R +  S+ N      L++LR                
Sbjct: 333 FTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIEN------LRHLR---------------- 370

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                         EL L+   L A+P  I     +  LD+  N ++ LP  L     L+
Sbjct: 371 --------------ELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLK 416

Query: 407 TLILSRNKIKDWP--DAILTSLSSLSCL 432
              + +N    +P  D     + ++ C 
Sbjct: 417 KFNVEKNPQLVYPPQDVCKQGIKAIFCF 444



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 189/427 (44%), Gaps = 49/427 (11%)

Query: 14  LNLSN-RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           LN+SN   L D+P       DE G   K      L  + L H +++++   + +L  L +
Sbjct: 45  LNVSNNHRLEDLP-------DEVGNAQK------LAHISLIHCSLQQIPAVVLSLKGLDI 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  NKL  +P  I  L +L+ L ++ N +  +PD IG    L K   S N+L  LP  
Sbjct: 92  LDLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG  L L +    +N + +LP  + +   + +L++E NKLT L   +    ++L   +  
Sbjct: 152 LGNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEG 211

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG LS L  L L +N+++ +P  +    +L E  MG N +   P  L +L
Sbjct: 212 NN-LRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           S L +L  + N++     +  +LR L  L +++N     P E+  +T+L KL L      
Sbjct: 271 SNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSLEKLYLG----- 325

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                                  +    E  T   + I    RL V    L L+      
Sbjct: 326 -----------------------QWGGGEKFTVIPEEIGTLVRLRV----LGLDSNAFRN 358

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I     + +L L  N ++ LP  +S   +L++L +  N++K  P   L  L+ L  
Sbjct: 359 VPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLP-TCLDKLTRLKK 417

Query: 432 LKLDNNP 438
             ++ NP
Sbjct: 418 FNVEKNP 424



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 20/263 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E V+L +L L  N +  L E++  +  L VL +  N L  +PA IG+L  L+ L +S N 
Sbjct: 177 EMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENK 236

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++K+P+++ +   L +     N+++E P  L R  NL    A+ N I  LP D+     +
Sbjct: 237 LVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYL 296

Query: 163 SKLDVEGNK----------LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
            +L +  N+          LT L    +  W               +PE IG+L RL  L
Sbjct: 297 RELSIASNEFEDFPEEVLDLTSLEKLYLGQW-------GGGEKFTVIPEEIGTLVRLRVL 349

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L  N   ++P SI     L E Y+ +N L ALP  +  L  L +LD+ +N+LK    C+
Sbjct: 350 GLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCL 409

Query: 271 EACQLRLSVLDLSNNSLSGLPPE 293
           +    RL   ++  N     PP+
Sbjct: 410 DKLT-RLKKFNVEKNPQLVYPPQ 431



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 6/172 (3%)

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSL 426
           NL  IP E++E  EI  L L  N ++ LP E+ +  +L+ L +S N +++D PD +  + 
Sbjct: 5   NLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV-GNA 63

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
             L+ + L +  L+Q+P+     +  L ILDL  N + S+P++   S+L  L+EL+L   
Sbjct: 64  QKLAHISLIHCSLQQIPAVVLS-LKGLDILDLDRNKLQSIPDD--ISNLQVLRELWLTGN 120

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QL   P  I  L  L+ L LS+N L S+P+   NL  L EL L DN +  LP
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLP 172



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 18/306 (5%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS-LSGLPPEI 294
           + N  L  +P E+ ++ ++  L L  N L+    E   L  L  L++SNN  L  LP E+
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G    L  + L    L+ + + +++     +L   R++L         +  +D+  +   
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKL--------QSIPDDISNLQV- 111

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                +EL L G  L ++P  I     + KL LSRN +  LP EL +   L+ L L  NK
Sbjct: 112 ----LRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNK 167

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           +   P +I   + +L  L L+ N L  +P +  K   +L +     N+ S+P       L
Sbjct: 168 LMTLPASI-GEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQ--IGQL 224

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +L+EL L   +L + P D+  L+ L+ L + +N ++  PEG   L++L  L  + N I+
Sbjct: 225 SNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIA 284

Query: 535 ALPPEL 540
            LP ++
Sbjct: 285 FLPRDI 290



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 23/266 (8%)

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LSN +L  +P E+ ++  +  LLL  N L +L   +   P    L+YL        +   
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPN---LRYL--------NVSN 49

Query: 342 STTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +   EDL   +  A +L+     +SL   +L  IP+ +     +  LDL RN +Q +P +
Sbjct: 50  NHRLEDLPDEVGNAQKLA----HISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDD 105

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +S+   L+ L L+ N+++  PD+I   L +L  L L  N L  +P D   ++  L+ L L
Sbjct: 106 ISNLQVLRELWLTGNQLESLPDSI-GLLMNLQKLGLSRNKLTSLP-DELGNLLFLRELWL 163

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
             N + +LP +     + +L  L L   +L   P ++ +++ L +L L  N+L+SIP   
Sbjct: 164 RDNKLMTLPAS--IGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQI 221

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
             L++L EL LS+N +  LP ++ ++
Sbjct: 222 GQLSNLEELGLSENKLVKLPEDVCNL 247


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 3/273 (1%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++S N+L++LP+ I EL  L +L++S N + ++P EIG   +L  FD S NQL +L
Sbjct: 18  LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+      N +  L  ++ +   ++ LD+  NKLT L    I     L  L
Sbjct: 78  PPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPE-IGELNNLKTL 136

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
            +S N L  +P  I  L  L  L L  N ++ +P  I+   +L    +  N L  LP+++
Sbjct: 137 YSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKI 196

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L  L  LDL  NQL +   E  +L+ L+ LDLS N L+ LPPEI ++  L  L L  N
Sbjct: 197 TELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFEN 256

Query: 309 PLRTLRSSLVNGPTPALLKYLR-SRLPENEDSE 340
           PL +L   +V+    A+  YL+ S+  EN +++
Sbjct: 257 PLISLPPEIVSQGVKAIFTYLKQSKTTENNEAK 289



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 137/250 (54%), Gaps = 2/250 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N + +L  ++  L  LT LN+S N+L++LP+ IGEL  L S D+S N + +
Sbjct: 17  NLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQ 76

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL +L   +    NL+    S N +T LP ++ + + +  L
Sbjct: 77  LPPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTL 136

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
               N+LT L    I     LTEL  S NL+  +P  I  L  L  L++++N+++ +PS 
Sbjct: 137 YSSSNQLTQLPLE-ITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSK 195

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I+   +L +  +  N L+ LP E+ +L  L TLDL  NQL +   E  +L+ L+ LDL  
Sbjct: 196 ITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFE 255

Query: 285 NSLSGLPPEI 294
           N L  LPPEI
Sbjct: 256 NPLISLPPEI 265



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 37/253 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS   L  +P+E+              E   L    L+ N + +L  ++  L  LT+
Sbjct: 43  TLNLSGNQLTQLPSEI-------------GELKSLTSFDLSVNQLTQLPPEIGELKNLTI 89

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LNV  N+L +L   I EL  L +LD+S N + ++P EIG    L     SSNQL +LP  
Sbjct: 90  LNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLE 149

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL++   S+N +  LP ++ +   ++ L+V  N+L  L                 
Sbjct: 150 ITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQL----------------- 192

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  I  L  L +LDL +N++  +P  I+   +L    +  N L+ LP E+ +L
Sbjct: 193 -------PSKITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAEL 245

Query: 253 SKLGTLDLHSNQL 265
             L TLDL  N L
Sbjct: 246 KNLTTLDLFENPL 258



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 42/290 (14%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TLDL  NQL +   E  +L+ L+ L+LS N L+ LP EIG++ +L    L+ N L  L
Sbjct: 18  LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L   R++L                                   +  +P
Sbjct: 78  PPEIGELKNLTILNVYRNQL-----------------------------------IQLLP 102

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI E   +T LDLS N + +LPPE+    +L+TL  S N++   P  I T L +L+ L 
Sbjct: 103 -EITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEI-TKLKNLTELY 160

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L +N + ++P +   ++  L  L++  N +  LP     + L +L++L L R QL + P 
Sbjct: 161 LSSNLMIRLPLE-ITELKNLTTLNVYRNQLIQLPSK--ITELKNLKKLDLSRNQLAQLPP 217

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +I  L+ L  LDLS+N L  +P     L +LT LDL +N + +LPPE+VS
Sbjct: 218 EIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFENPLISLPPEIVS 267



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 137/274 (50%), Gaps = 41/274 (14%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
           EA +  L+ LDLS N L+ LP EI ++  L  L L+GN L                    
Sbjct: 12  EAYEKNLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQL-------------------- 51

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           ++LP    SE    K          S+TS +LS+    L+ +P EI E   +T L++ RN
Sbjct: 52  TQLP----SEIGELK----------SLTSFDLSVN--QLTQLPPEIGELKNLTILNVYRN 95

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            + +L PE++   +L TL LS NK+   P  I   L++L  L   +N L Q+P +  K +
Sbjct: 96  QLIQLLPEITELKNLTTLDLSLNKLTQLPPEI-GELNNLKTLYSSSNQLTQLPLEITK-L 153

Query: 451 PMLQILDLSYNIA-SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L  L LS N+   LP     + L +L  L + R QL + P+ I  L+ L+ LDLS+N 
Sbjct: 154 KNLTELYLSSNLMIRLP--LEITELKNLTTLNVYRNQLIQLPSKITELKNLKKLDLSRNQ 211

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  +P     L +LT LDLS N ++ LPPE+  +
Sbjct: 212 LAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAEL 245



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L  + N + +L  ++  L  LT L +S N +  LP  I EL  L +L+V  N 
Sbjct: 129 ELNNLKTLYSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQ 188

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++++P +I     L K D S NQL +LP  +    NL+    S N +  LP ++A+   +
Sbjct: 189 LIQLPSKITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNL 248

Query: 163 SKLDVEGNKLT-----VLSNNLIASWTMLTELIASKN 194
           + LD+  N L      ++S  + A +T L +   ++N
Sbjct: 249 TTLDLFENPLISLPPEIVSQGVKAIFTYLKQSKTTEN 285


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 193/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D+RNLP L+ L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITAVEKDVRNLPRLSTL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P  I     +T L L  N +  LP E+     +Q
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRLLWMQ 520



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 214/451 (47%), Gaps = 48/451 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + + +L RL  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P G  +LT+LT L L +N ++ LP E+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 197/419 (47%), Gaps = 44/419 (10%)

Query: 128 ELPSSLGRCL--NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           E+   L +C   N      S   I  LP  + + +++++L +  NKL  L    +     
Sbjct: 89  EVTKELNKCREENSMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAE-VGCLVN 147

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SL   Y+  N ++A+
Sbjct: 148 LMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAV 207

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             ++  L +L TL +  N++K+   E  +L  L  LD+++N L  LP EIG  T +  L 
Sbjct: 208 EKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLD 267

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  ++ N                                   LS  ++ L L
Sbjct: 268 LQHNELLDLPDTIGN-----------------------------------LSSLNR-LGL 291

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAIL 423
               LSAIP  + +   + +L+L  N+I  LP  L SS   L +L L+RN  + +P    
Sbjct: 292 RYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGP 351

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
           +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   + EL L
Sbjct: 352 SQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNL 409

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
              QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 410 ATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 195/405 (48%), Gaps = 42/405 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  ++ +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 AVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITAVEKD-VRNLPRLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N       
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 50/97 (51%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ LIL++N ++KL   L NL  L  L++  NKL  LP  I  L  L+ L ++ N + 
Sbjct: 425 VSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLT 484

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            +P  IG  T L       N L  LP  +GR L + D
Sbjct: 485 TLPRGIGHLTNLTHLGLGENLLTHLPEEIGRLLWMQD 521


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNVLPNKVEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 160/369 (43%), Gaps = 63/369 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L  L+L  N+++++P  I    +L + ++  N L ALP E+G+L  L
Sbjct: 61  LTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNL 120

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L+ NQL     E  QL+ L  L+L++N L+ LP +I ++  L+ L L  N   ++ 
Sbjct: 121 QKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSIL 180

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L+ L S                              L L+   L+ +P 
Sbjct: 181 KEI------GQLQNLES------------------------------LGLDHNQLNVLPK 204

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------------ 422
           EI +   +  L L  N +  LP E+    +LQ L L  N++   P  I            
Sbjct: 205 EIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 423 ----------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
                     +  L +L  LKL  N L  +P +    +  LQ LDL  N + +LPEN   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--I 321

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L  LQ LYL   QL   P  + +LQ L  LDL  N L ++P+    L  L  L+L  N
Sbjct: 322 GQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYN 381

Query: 532 NISALPPEL 540
            ++ LP E+
Sbjct: 382 QLATLPEEI 390


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 141/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L LAHN +  L ED+  L  L  L + HN+ + +   IG+L  L+SL +  N +  
Sbjct: 142 NLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV 201

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  +G+  NL      NN +T+LP+++     + KL
Sbjct: 202 LPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKL 261

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKLT L    I     L +L   +N L  +P+ IG L  L  LDL  N++ ++P +
Sbjct: 262 LLNKNKLTTLPEE-IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPEN 320

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L   Y+GNN L+ LP ++ +L  L +LDL  NQL     E  +L +L  L+L  
Sbjct: 321 IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKY 380

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EI ++  L+KL L  NPL
Sbjct: 381 NQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 EEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNFLPNK-VEQLQNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 98

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+GKL  L  L+L  NQL     
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPE 158

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 209

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 210 RN---------------------------LESLGLDHNQLNVLPKEIGQLQNLQILHLRN 242

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 243 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 300

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +LQ L  LDL  N
Sbjct: 301 LQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHN 358

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 359 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|324504718|gb|ADY42033.1| Leucine-rich repeat protein soc-2 [Ascaris suum]
          Length = 587

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 41/418 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  +  ++  L  L ++++  NK+ ELPA IG++  L    +S+N
Sbjct: 191 YQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDLRENKIRELPATIGQISSLLVCLLSYN 250

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  IPDEIG  T L + D   N L  LPS++G   NL       N +  LP  +++C K
Sbjct: 251 HLRTIPDEIGQCTELTQLDLQHNDLVSLPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHK 310

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 220
           + +  VE N+L  L + ++ S   L  +  S+N L   P       +  + +++  N I 
Sbjct: 311 LEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPAGGPQQFASAVTINMEHNSIS 370

Query: 221 SIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            IP  I +    L +  +  N L+++P ++G  + +  L+L +NQL+    +  +L  L 
Sbjct: 371 KIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLSTNQLRVLPDDIDKLINLE 430

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           VL LSNN L  LP +IG +  LR+L L  N L ++ S +                     
Sbjct: 431 VLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVPSEI--------------------- 469

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     +T  T+L + S +       L ++P  I     +T L    N++  LP E
Sbjct: 470 --------GFVTTLTKLWIQSNK-------LVSLPRTIGNLTNLTDLRAGENNLTSLPEE 514

Query: 399 LSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           + +  SL++L ++ N  + + P   L   +SL  + ++N PL Q+P +     P L I
Sbjct: 515 IGNLDSLKSLYINDNSSLHNLPFE-LALCASLEIMSIENCPLSQIPPEITAGGPSLVI 571



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 198/423 (46%), Gaps = 84/423 (19%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S++ I S+P  + D  ++++L +  NKLT L +  I +   LT+L  S+N L  +P+++ 
Sbjct: 110 SSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHE-IGNLVNLTKLGLSENGLTSLPDSLS 168

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L++L  LDL  N++  IP  I    SL   ++  N + ++ AE+G+L +L  +DL  N+
Sbjct: 169 ALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDLRENK 228

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           ++E                      LP  IG++++L   LL+ N LRT+           
Sbjct: 229 IRE----------------------LPATIGQISSLLVCLLSYNHLRTI----------- 255

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                 D I   T L+    +L L+  +L ++PS +     + +
Sbjct: 256 ---------------------PDEIGQCTELT----QLDLQHNDLVSLPSTMGNLSNLIR 290

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L +  N ++ LPP +S+C  L+  I+  N+++  PD +LTSL +L  + L  N L   P+
Sbjct: 291 LGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPA 350

Query: 445 DGFKDIPMLQILDLSYN-IASLP----------------ENPPFSSLP-------HLQEL 480
            G +       +++ +N I+ +P                EN   +S+P        + EL
Sbjct: 351 GGPQQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKEN-GLTSMPLDMGAWTAMTEL 409

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L   QLR  P DI +L  L +L LS N L+ +P     L  L ELDL +N + ++P E+
Sbjct: 410 NLSTNQLRVLPDDIDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVPSEI 469

Query: 541 VSV 543
             V
Sbjct: 470 GFV 472



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 209/461 (45%), Gaps = 79/461 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L KL L+ N +  L + L  L  L  L++ HNKL E+P  I ++  L++L + +N I+
Sbjct: 148 VNLTKLGLSENGLTSLPDSLSALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIV 207

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  EIG    L   D   N+++ELP+++G+  +L     S N + ++P+++  C+++++
Sbjct: 208 SVGAEIGRLKRLKMIDLRENKIRELPATIGQISSLLVCLLSYNHLRTIPDEIGQCTELTQ 267

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L  L                        P T+G+LS LIRL +  N++  +P 
Sbjct: 268 LDLQHNDLVSL------------------------PSTMGNLSNLIRLGIRYNKLRYLPP 303

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE---------------- 267
            +S C  L EF + +N L ALP   L  L  L T++L  N+L                  
Sbjct: 304 GMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPAGGPQQFASAVTIN 363

Query: 268 ----------YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
                     + + A    L+ L+L  N L+ +P ++G  T + +L L+ N LR L    
Sbjct: 364 MEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLSTNQLRVLPDDI 423

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             L+N     L      +LP    S+    K+             +EL LE   L ++PS
Sbjct: 424 DKLINLEVLVLSNNQLKKLP----SQIGALKK------------LRELDLEENELDSVPS 467

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI     +TKL +  N +  LP  + +  +L  L    N +   P+ I  +L SL  L +
Sbjct: 468 EIGFVTTLTKLWIQSNKLVSLPRTIGNLTNLTDLRAGENNLTSLPEEI-GNLDSLKSLYI 526

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++N           ++P    L  S  I S+ EN P S +P
Sbjct: 527 NDN-------SSLHNLPFELALCASLEIMSI-ENCPLSQIP 559



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 153/347 (44%), Gaps = 42/347 (12%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LS   LR +P+E+              +  +L +L L HN++  L   + NL  L  L +
Sbjct: 247 LSYNHLRTIPDEI-------------GQCTELTQLDLQHNDLVSLPSTMGNLSNLIRLGI 293

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSS-- 132
            +NKL  LP  +   H L+   V  N +  +PD  + S   L   + S N+L   P+   
Sbjct: 294 RYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPAGGP 353

Query: 133 -----------------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                                    +   L+      N +TS+P D+   + M++L++  
Sbjct: 354 QQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLST 413

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L VL ++ I     L  L+ S N L  +P  IG+L +L  LDL +N + S+PS I   
Sbjct: 414 NQLRVLPDD-IDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVPSEIGFV 472

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS-L 287
            +L + ++ +N L +LP  +G L+ L  L    N L     E   L  L  L +++NS L
Sbjct: 473 TTLTKLWIQSNKLVSLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYINDNSSL 532

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LP E+    +L  + +   PL  +   +  G    +++YL+ + P
Sbjct: 533 HNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 579



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 28/233 (12%)

Query: 335 ENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           EN++     +  D++++ T +   V   EL L    L+A+P EI     +TKL LS N +
Sbjct: 101 ENDEKRLDLSSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGL 160

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLS 430
             LP  LS+   L+TL L  NK+ + P  I                      +  L  L 
Sbjct: 161 TSLPDSLSALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLK 220

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            + L  N +R++P+     I  L +  LSYN + ++P+         L +L L+   L  
Sbjct: 221 MIDLRENKIRELPAT-IGQISSLLVCLLSYNHLRTIPDE--IGQCTELTQLDLQHNDLVS 277

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            P+ +  L  L  L +  N L+ +P G  N   L E  +  N + ALP  +++
Sbjct: 278 LPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLT 330



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 456 LDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDLS  +I S+P +     L  L EL+L + +L   P +I  L  L  L LS+N L S+P
Sbjct: 107 LDLSSSDIVSIPTS--IRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGLTSLP 164

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
           +    LT L  LDL  N +  +PP +  +
Sbjct: 165 DSLSALTQLETLDLRHNKLCEIPPVIYQI 193


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 208/428 (48%), Gaps = 41/428 (9%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +DR L+   T+  L+LS+  L ++P  +              +   L +L L+ NN+  +
Sbjct: 14  IDRCLRDGSTT--LDLSSLGLSEIPESLS-------------DLTHLARLDLSENNLSDI 58

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              LR+LP LT LN+  N L  +   +G+L  L+ LD+  N + + PD +G+  AL + +
Sbjct: 59  PSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELN 118

Query: 121 CSSNQLKELPSSLGRC-----LNLSDFKA------SNNCITSLPEDLADCSKMSKLDVEG 169
            S N L  LP +L        LNLS              +T+LPE L + + +++LD+  
Sbjct: 119 LSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSS 178

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L   ++ + T LT L  S N L  +P+T+G+L+ L +L L+ N++ ++P ++   
Sbjct: 179 NRLTALP-EVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNL 237

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
             L E  + +N L+ LP  LG L+ L  L L+ NQL         L  L+ LDLS+N L+
Sbjct: 238 TDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLT 297

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G +T L   +   N L  +   L +     LL    +RL         TT  D 
Sbjct: 298 TLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNRL---------TTLPDT 348

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +   T L++    LSL G  L+A+P  +    ++T L+L  N +  LP  L     L  +
Sbjct: 349 LGNLTSLTM----LSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLPDLTWI 404

Query: 409 ILSRNKIK 416
            LS N I 
Sbjct: 405 NLSGNPID 412



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 201/416 (48%), Gaps = 49/416 (11%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           + ++ E L +L  L  L++S N LS++P+++ +L  L  L++  N +  + D +G    L
Sbjct: 32  LSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTL 91

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG------N 170
              D   N L + P SLG  + L++   S N +++LP+ L + + +++L++         
Sbjct: 92  EVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPE 151

Query: 171 KLTVLSNNLIASW----TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
               L    +  W    T LTEL  S N L  +PE +G+L+ L  L+L  NR+ ++P ++
Sbjct: 152 FFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTL 211

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL +  +  N L+ALP  LG L+ L  LDL SN+L         L  L++L L  N
Sbjct: 212 GNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGN 271

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP  +G +T L +L L+ N L TL         P +L  L                
Sbjct: 272 QLTALPETLGNLTNLTELDLSSNRLTTL---------PEVLGNLT--------------- 307

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            DL T     ++           L+A+P  + +  ++T L LS N +  LP  L +  SL
Sbjct: 308 -DLTTFIAHDNL-----------LTAVPEWLGDITDLTLLGLSGNRLTTLPDTLGNLTSL 355

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             L L  N++   P+  L +L+ L+ L+L NN L  +P +   D+P L  ++LS N
Sbjct: 356 TMLSLYGNQLTALPET-LGNLTDLTDLELWNNRLTALP-ESLGDLPDLTWINLSGN 409



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N +  L E L NL  LT L++S N+L+ LP  +G L  L  L +  N +  +
Sbjct: 217 LTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTAL 276

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G+ T L + D SSN+L  LP  LG   +L+ F A +N +T++PE L D + ++ L 
Sbjct: 277 PETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLG 336

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT L + L  + T LT L    N L  +PET+G+L+ L  L+L  NR+ ++P S+
Sbjct: 337 LSGNRLTTLPDTL-GNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESL 395

Query: 227 SGCCSLAEFYMGNNALSA 244
                L    +  N + A
Sbjct: 396 GDLPDLTWINLSGNPIDA 413



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 205/454 (45%), Gaps = 84/454 (18%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCL--NLSDFKASNNCITSLPEDLADCSKMSKLD 166
           EIG  TA  + D              RCL    +    S+  ++ +PE L+D + +++LD
Sbjct: 4   EIGRRTAHARID--------------RCLRDGSTTLDLSSLGLSEIPESLSDLTHLARLD 49

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L+ + ++L      LTEL    N L  + +T+G L  L  LDL +N +   P S+
Sbjct: 50  LSENNLSDIPSSL-RDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSL 108

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS--------------NQLKEYCVEA 272
               +L E  +  N LSALP  L  L+ L  L+L S                L E+    
Sbjct: 109 GNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNL 168

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
             L  + LDLS+N L+ LP  +G +T L  L L+GN L TL  +L N             
Sbjct: 169 TDL--TELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGN------------- 213

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                   AS TK                LSL G  L+A+P  +    ++T+LDLS N +
Sbjct: 214 -------LASLTK----------------LSLYGNQLTALPETLGNLTDLTELDLSSNRL 250

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             LP  L + ASL  L L  N++   P+  L +L++L+ L L +N L  +P        +
Sbjct: 251 TTLPDTLGNLASLTMLSLYGNQLTALPET-LGNLTNLTELDLSSNRLTTLPE------VL 303

Query: 453 LQILDLSYNIA------SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             + DL+  IA      ++PE      +  L  L L   +L   P  +  L  L +L L 
Sbjct: 304 GNLTDLTTFIAHDNLLTAVPE--WLGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLY 361

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L ++PE   NLT LT+L+L +N ++ALP  L
Sbjct: 362 GNQLTALPETLGNLTDLTDLELWNNRLTALPESL 395


>gi|428164826|gb|EKX33838.1| hypothetical protein GUITHDRAFT_81033, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 204/408 (50%), Gaps = 17/408 (4%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
              + +  +L  L L  N I+ +   ++++  L +LN S+NK+  LP  IG+L+ LK+  
Sbjct: 18  ASSFLQLTNLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKIGSLPLEIGKLNSLKTFI 77

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +S+N +  +P  IG  TAL +   S+NQ+  LP  LG   +L++    +N +   P ++ 
Sbjct: 78  MSYNLLTTLPPTIGGMTALTELSVSNNQITRLPPILGVMTSLTEVNIQDNFLDQHPVEVV 137

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + + + +L +E N+L+ +    I+  + LT L  S N L  +P +IG+LS L  L L+ N
Sbjct: 138 EHALLLQLKLELNRLSNIPPE-ISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDN 196

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P  +          + NN ++ +P ++G L+ L  L L  N +        +++ 
Sbjct: 197 KLTRLPIELGHLSPTMLSRLDNNDITIIPVQVGNLTSLTELWLEGNNIMFLSSSIGKMQD 256

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY-LRSRLPE 335
           L VL + NN L  LP EIG + TL +L +  N ++ L         PA +K+    R   
Sbjct: 257 LKVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKVL---------PADIKHCFNLRKLS 307

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            + +  ST   D++   T L    + L++    +  +P  +     + KL + +N ++ L
Sbjct: 308 LQHNLLSTVSADVLQSLTNL----ESLNISRNQIVYVPGTVGCLHALQKLRMDQNQVRSL 363

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           P E+  C+SL  L ++ N+    PD  L+S S L+ L +  N   Q+P
Sbjct: 364 PSEIGGCSSLTLLSITCNQFSSLPDE-LSSCSLLTALHISGNRFFQLP 410



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 198/426 (46%), Gaps = 19/426 (4%)

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +L   + + N+LKE  SS  +  NL +   + N I  +P  +   + +  L+   NK+ 
Sbjct: 2   VSLRTLNLAGNRLKEFASSFLQLTNLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKIG 61

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L   I S NLL  +P TIG ++ L  L +  N+I  +P  +    SL 
Sbjct: 62  SLPLE-IGKLNSLKTFIMSYNLLTTLPPTIGGMTALTELSVSNNQITRLPPILGVMTSLT 120

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
           E  + +N L   P E+ + + L  L L  N+L     E  +L  L+ L+ S+N L  LPP
Sbjct: 121 EVNIQDNFLDQHPVEVVEHALLLQLKLELNRLSNIPPEISRLSTLTFLNFSHNQLRTLPP 180

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IG ++ L  L L  N L  L   L    +P +L    SRL  N+ +       +L ++ 
Sbjct: 181 SIGTLSNLTVLYLNDNKLTRLPIEL-GHLSPTML----SRLDNNDITIIPVQVGNLTSLT 235

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                   EL LEG N+  + S I +  ++  L +  N +  LP E+ +  +L  L +  
Sbjct: 236 --------ELWLEGNNIMFLSSSIGKMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPF 287

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
           N+IK  P A +    +L  L L +N L  V +D  + +  L+ L++S N I  +P     
Sbjct: 288 NEIKVLP-ADIKHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGT--V 344

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L  LQ+L + + Q+R  P++I     L +L ++ N   S+P+   + + LT L +S N
Sbjct: 345 GCLHALQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGN 404

Query: 532 NISALP 537
               LP
Sbjct: 405 RFFQLP 410



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 29/248 (11%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH--MLKSLDVSFNSIMKIPDE 109
            +HN +  L   +  L  LTVL ++ NKL+ LP  +G L   ML  LD   N I  IP +
Sbjct: 170 FSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIELGHLSPTMLSRLDN--NDITIIPVQ 227

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC--------------------- 148
           +G+ T+L +     N +  L SS+G+  +L      NN                      
Sbjct: 228 VGNLTSLTELWLEGNNIMFLSSSIGKMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPF 287

Query: 149 --ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
             I  LP D+  C  + KL ++ N L+ +S +++ S T L  L  S+N +  +P T+G L
Sbjct: 288 NEIKVLPADIKHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCL 347

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L +L + QN++ S+PS I GC SL    +  N  S+LP EL   S L  L +  N+  
Sbjct: 348 HALQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFF 407

Query: 267 EY--CVEA 272
           +   C+E+
Sbjct: 408 QLPRCIES 415


>gi|356570674|ref|XP_003553510.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Glycine max]
          Length = 1018

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 164/538 (30%), Positives = 245/538 (45%), Gaps = 46/538 (8%)

Query: 38  GDKWWEAVDLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKS 95
           G K   A  ++KL L+H N+  ++  D++ L  LT LN+  N  S  LP +I  L  L S
Sbjct: 66  GIKCNSAGAVEKLDLSHKNLSGRVSNDIQRLESLTSLNLCCNAFSTPLPKSIANLTTLNS 125

Query: 96  LDVSFN-SIMKIPDEIGSATALVKFDCSSNQLK-ELPSSLGR--CLNLSDFKASNNCITS 151
           LDVS N  I   P  +G A  LV  + SSN+    LP  L    CL + D + S   + S
Sbjct: 126 LDVSQNLFIGDFPLGLGRALRLVALNASSNEFSGSLPEDLANASCLEMLDLRGSF-FVGS 184

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLI 210
           +P+  ++  K+  L + GN LT      +   + L  +I   N    G+P+  G+L+ L 
Sbjct: 185 VPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEHMILGYNEFEGGIPDEFGNLTNLK 244

Query: 211 RLDLH-QNRILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLK-E 267
            LDL   N    IP  +     L   ++ NN     +P  +G ++ L  LDL  N L  +
Sbjct: 245 YLDLAVANLGGEIPGGLGELKLLNTVFLYNNNFDGRIPPAIGNMTSLQLLDLSDNMLSGK 304

Query: 268 YCVEACQLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              E  QL+ L +L+   N LSG +P   G +  L  L L  N L        +GP P+ 
Sbjct: 305 IPSEISQLKNLKLLNFMGNKLSGPVPSGFGDLQQLEVLELWNNSL--------SGPLPSN 356

Query: 326 LKY-------------LRSRLPENEDSEASTTKEDLITMATRLSVTSK--------ELSL 364
           L               L   +PE   S+ + TK  L   A    + S          + +
Sbjct: 357 LGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFTGPIPSSLSMCPSLVRVRI 416

Query: 365 EGMNLSA-IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAI 422
           +   LS  +P  + + G++ +L+L+ NS+   +P ++SS  SL  + LSRNK+     + 
Sbjct: 417 QNNFLSGTVPVGLGKLGKLQRLELANNSLSGGIPDDISSSTSLSFIDLSRNKLHSSLPST 476

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 482
           + S+  L    + NN L     D F+D P L +LDLS N  S       +S   L  L L
Sbjct: 477 VLSIPDLQAFMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNL 536

Query: 483 RRMQL-REAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 538
           +  QL  E P  + ++  L +LDLS NSL   IPE F    +L  L++S N +    P
Sbjct: 537 QNNQLTSEIPKALAKMPTLAMLDLSNNSLTGQIPESFGVSPALEALNVSYNKLEGPVP 594



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 33/191 (17%)

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--IQELPPELSSCASLQTLILSR 412
           L+ +S E S       ++P ++  A  +  LDL R S  +  +P   S+   L+ L LS 
Sbjct: 150 LNASSNEFS------GSLPEDLANASCLEMLDL-RGSFFVGSVPKSFSNLHKLKFLGLSG 202

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
           N +       L  LSSL  + L  N       D F ++  L+ LDL+  +A+L       
Sbjct: 203 NNLTGKIPGELGQLSSLEHMILGYNEFEGGIPDEFGNLTNLKYLDLA--VANLGG----- 255

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDN 531
                           E P  +  L+ L  + L  N+    IP    N+TSL  LDLSDN
Sbjct: 256 ----------------EIPGGLGELKLLNTVFLYNNNFDGRIPPAIGNMTSLQLLDLSDN 299

Query: 532 NISALPPELVS 542
            +S   P  +S
Sbjct: 300 MLSGKIPSEIS 310


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+  ++ D+P E  KN               L  L L  N   +L E +     +T+L
Sbjct: 87  LNLNRNTITDIP-ETLKNCKL------------LTNLHLNGNPFTRLPESICECTSITIL 133

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++   L+ LPA IG L  L+ LD   N +  IP+ I     L + D   N+++ELP  +
Sbjct: 134 SLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKI 193

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +F    N + SLP+ ++DC  + +LDV  N+L+ L +NL  + T LT+L  S 
Sbjct: 194 GKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNL-GNMTSLTDLNISS 252

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P +IG+L RL  L   +N +  +   I  C SL E Y+G N LS LP  +G L 
Sbjct: 253 NEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLR 312

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +L TL++  N L E    +  C+  L+VL L  N L+ LP  IG+   +  L +  N L 
Sbjct: 313 QLTTLNVDCNNLSEIPETIGNCK-SLTVLSLRQNILTELPMTIGRCENMTVLDVASNKLP 371

Query: 312 TL 313
            L
Sbjct: 372 NL 373



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 195/426 (45%), Gaps = 47/426 (11%)

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +G    +   D SS+ L+ +P+ + R   L D   + N I  L   L    ++  LDV  
Sbjct: 9   MGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSD 68

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L+VL  + I   T L EL  ++N +  +PET+ +   L  L L+ N    +P SI  C
Sbjct: 69  NELSVLPPD-IGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICEC 127

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            S+    + +  L+ LPA +G L  L  LD   N L+       +L+ L  LDL  N + 
Sbjct: 128 TSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIE 187

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTK 345
            LP +IGK+T+LR+  +  N L++L  S+ +      L       SRLP+N  +      
Sbjct: 188 ELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGN------ 241

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              +T  T L+++S E+         +PS I     +  L   RNS+ +L PE+  C SL
Sbjct: 242 ---MTSLTDLNISSNEII-------ELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSL 291

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
             + L +N + D PD I   L  L+ L +D N L ++P +   +   L +L L  NI   
Sbjct: 292 TEMYLGQNYLSDLPDTI-GDLRQLTTLNVDCNNLSEIP-ETIGNCKSLTVLSLRQNI--- 346

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
                                L E P  I R + + +LD++ N L ++P   K L  L  
Sbjct: 347 ---------------------LTELPMTIGRCENMTVLDVASNKLPNLPFTVKVLYKLQA 385

Query: 526 LDLSDN 531
           L LS+N
Sbjct: 386 LWLSEN 391



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 198/416 (47%), Gaps = 51/416 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +   R   S++ S+ +L+ +P ++++ F +            L+ L L  NNI++L   L
Sbjct: 9   MGCQRQVDSVDRSSSNLQAIPTDIFR-FRK------------LEDLNLTMNNIKELDRRL 55

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L VL+VS N+LS LP  IG L  L  L+++ N+I  IP+ + +   L     + N
Sbjct: 56  FTLRRLRVLDVSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGN 115

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
               LP S+  C +++    ++  +T LP ++     +  LD   N L  + N+ IA   
Sbjct: 116 PFTRLPESICECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNS-IAELK 174

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL   +N +  +P+ IG L+ L    +  N + S+P SIS C +L +  + +N LS 
Sbjct: 175 NLEELDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSR 234

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP  LG ++ L  L++ SN++ E       L RL +L    NSL+ L PEIG+  +L ++
Sbjct: 235 LPDNLGNMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEM 294

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N                   YL S LP+        T  DL  + T        L+
Sbjct: 295 YLGQN-------------------YL-SDLPD--------TIGDLRQLTT--------LN 318

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++  NLS IP  I     +T L L +N + ELP  +  C ++  L ++ NK+ + P
Sbjct: 319 VDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCENMTVLDVASNKLPNLP 374



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 98/173 (56%), Gaps = 5/173 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LS +P +I    ++ +L+L+RN+I ++P  L +C  L  L L+ N     P++I    +S
Sbjct: 71  LSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESIC-ECTS 129

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           ++ L L++  L  +P++    +  L++LD   N + ++P +   + L +L+EL L + ++
Sbjct: 130 ITILSLNDTTLTILPAN-IGLLVNLRVLDARENHLRTIPNS--IAELKNLEELDLGQNEI 186

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            E P  I +L  LR   +  N LQS+P+   +  +L +LD+SDN +S LP  L
Sbjct: 187 EELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNL 239



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 19/272 (6%)

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +C+   CQ ++  +D S+++L  +P +I +   L  L LT N ++ L   L         
Sbjct: 5   FCLPMGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLF-------- 56

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
              R R+ +  D+E S    D+  +   +     EL+L    ++ IP  +     +T L 
Sbjct: 57  TLRRLRVLDVSDNELSVLPPDIGHLTQLI-----ELNLNRNTITDIPETLKNCKLLTNLH 111

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L+ N    LP  +  C S+  L L+   +   P A +  L +L  L    N LR +P + 
Sbjct: 112 LNGNPFTRLPESICECTSITILSLNDTTLTILP-ANIGLLVNLRVLDARENHLRTIP-NS 169

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             ++  L+ LDL  N I  LP+      L  L+E Y+    L+  P  I   + L  LD+
Sbjct: 170 IAELKNLEELDLGQNEIEELPQK--IGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDV 227

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           S N L  +P+   N+TSLT+L++S N I  LP
Sbjct: 228 SDNRLSRLPDNLGNMTSLTDLNISSNEIIELP 259


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 164/322 (50%), Gaps = 15/322 (4%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P EIG    L K + SSN+++++P SL     L++     N +T++P++++   
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            M  L++  NK+  + ++L A    LTEL    N L  +P+ IG L  L  L L+ N+I 
Sbjct: 61  NMKILNLSSNKIAKIPDSLCA-LEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIA 119

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            IP S+     L E YMG++AL+A+P  +GKL  +  L L  N++++     C L +L+ 
Sbjct: 120 KIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTE 179

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L++  N+L+ +P EIGK+ +++ L L  N    +  SL           L      N  S
Sbjct: 180 LNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLC---------ALEQLTELNMKS 230

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A T+  D I+    +    K L+L    +  IP  +    ++T+L++  N++  +P E+
Sbjct: 231 NALTSIPDEISKLKSM----KTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEI 286

Query: 400 SSCASLQTLILSRNKIKDWPDA 421
               S++ L L  NK    PD+
Sbjct: 287 GKLKSMKILNLKSNKFAKIPDS 308



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 153/297 (51%), Gaps = 23/297 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +LQKL L+ N IEK+ E L  L  LT LNV +N L+ +P  I +L  +K L++S N 
Sbjct: 12  ECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNK 71

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I KIPD + +   L +     N L  +P  +G+  +L+  K +NN I  +P+ L    ++
Sbjct: 72  IAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQL 131

Query: 163 SKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMP 200
           ++L +  + LT + + +                      + +   LTEL    N L  +P
Sbjct: 132 TELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  +  L+L  N+   IP S+     L E  M +NAL+++P E+ KL  + TL+L
Sbjct: 192 DEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNL 251

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            +N +++     C L +L+ L++  N+L+ +P EIGK+ +++ L L  N    +  S
Sbjct: 252 SANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIPDS 308



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 138/249 (55%), Gaps = 2/249 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+S NK+ ++P ++  L  L  L+V +N++  IPDEI     +   + SSN++ ++
Sbjct: 16  LQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNKIAKI 75

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P SL     L++     N +T++P+++     ++ L +  NK+  + ++L A    LTEL
Sbjct: 76  PDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCA-LEQLTEL 134

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               + L  +P+ IG L  +  L L +N I  IP S+     L E  M  NAL+A+P E+
Sbjct: 135 YMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEI 194

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GKL  +  L+L SN+  +     C L +L+ L++ +N+L+ +P EI K+ +++ L L+ N
Sbjct: 195 GKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSAN 254

Query: 309 PLRTLRSSL 317
            +  +  SL
Sbjct: 255 TIEKIPDSL 263



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 40/345 (11%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG    L +L+L  N+I  IP S+     L E  +  NAL+A+P E+ KL 
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  L+L SN++ +     C L +L+ L +  N+L+ +P EIGK+ +L  L L  N +  
Sbjct: 61  NMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAK 120

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +  SL      AL +     +     S+A T   D I     + +    L L+   +  I
Sbjct: 121 IPDSLC-----ALEQLTELYM----GSDALTAIPDAIGKLKSMKI----LKLDENEIEKI 167

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  +    ++T+L++  N++  +P E+    S++ L L  NK    PD+ L +L  L+ L
Sbjct: 168 PDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDS-LCALEQLTEL 226

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            + +N L  +P +                          S L  ++ L L    + + P 
Sbjct: 227 NMKSNALTSIPDE-------------------------ISKLKSMKTLNLSANTIEKIPD 261

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +  L+QL  L++  N+L +IP+    L S+  L+L  N  + +P
Sbjct: 262 SLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIP 306



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 27/307 (8%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKE-----YCVEACQLRLSVLDLSNNSLSGLPPEI 294
           N L+ +P E+G+  +L  L+L SN++++     Y +E    +L+ L++  N+L+ +P EI
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALE----QLTELNVRYNALTAIPDEI 56

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
            K+  ++ L L+ N +  +  SL      AL +     +  N    A T   D I     
Sbjct: 57  SKLKNMKILNLSSNKIAKIPDSLC-----ALEQLTELYMEYN----ALTAIPDEIGKLKS 107

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L++    L L    ++ IP  +    ++T+L +  +++  +P  +    S++ L L  N+
Sbjct: 108 LNI----LKLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENE 163

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           I+  PD+ L +L  L+ L +  N L  +P D    +  ++IL+L  N  A +P++    +
Sbjct: 164 IEKIPDS-LCALEQLTELNMKYNALTAIP-DEIGKLKSMKILNLRSNKFAKIPDS--LCA 219

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L EL ++   L   P +I +L+ ++ L+LS N+++ IP+    L  LTEL++  N +
Sbjct: 220 LEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNAL 279

Query: 534 SALPPEL 540
           +A+P E+
Sbjct: 280 TAIPDEI 286


>gi|3894393|gb|AAC78596.1| Hcr2-5D [Solanum lycopersicum var. cerasiforme]
          Length = 1016

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 171/562 (30%), Positives = 256/562 (45%), Gaps = 80/562 (14%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L++NNI   +  ++ NL  L  L+++ N++S  +P  IG L  L+ + + FN+ +
Sbjct: 97  LENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRI-FNNHL 155

Query: 105 K--IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG   +L K     N L   +P+SLG   NLS  F   N     +PE++    
Sbjct: 156 NGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLR 215

Query: 161 KMSKLDVEGNKLT----------------VLSNNL--------IASWTMLTELIASKNLL 196
            ++KL ++ N L+                 L NN         I     LT+L    N L
Sbjct: 216 SLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFL 275

Query: 197 NG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           +G +P ++G+L+ L RLDL+ N++  SIP  I    SL    +G NAL+  +PA LG L+
Sbjct: 276 SGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLN 335

Query: 254 KLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
            L  L L++NQL     E    LR L+ LDL  N+L+G +P  +G +  L +L L  N L
Sbjct: 336 NLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKL 395

Query: 311 RTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                   +G  P  + YLRS   L   E++   +    L  +     +      L G  
Sbjct: 396 --------SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSG-- 445

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQ-------------------------ELPPELSSCA 403
             +IP EI     +T+L L  NS+                           +P E+   +
Sbjct: 446 --SIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLS 503

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           SL  L L  N +     A L +L++LS L L NN L       F ++  LQ L LS N  
Sbjct: 504 SLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDN-D 562

Query: 464 SLPENPPF-SSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNL 520
            + E P F  +L  L+ LY+ R  L+ + P  +  +  L IL +S NS +  +P    NL
Sbjct: 563 LIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNL 622

Query: 521 TSLTELDLSDNNISALPPELVS 542
           TSL  LD   NN+    P+   
Sbjct: 623 TSLKILDFGRNNLEGAIPQFFG 644



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 234/494 (47%), Gaps = 35/494 (7%)

Query: 67  LPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSSN 124
           LP L  L++S+N +S  +P  IG L  L  LD++ N I   IP +IGS   L      +N
Sbjct: 94  LPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNN 153

Query: 125 QLKE-LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            L   +P  +G   +L+      N ++ S+P  L + + +S L +  N+L+      I  
Sbjct: 154 HLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGY 213

Query: 183 WTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNN 240
              LT+L    N L+G +P ++G+L+ L  L L+ N++  SIP  I    SL +  +G N
Sbjct: 214 LRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGIN 273

Query: 241 ALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGK 296
            LS  +PA LG L+ L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G 
Sbjct: 274 FLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGN 333

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMA 352
           +  L  L L  N L        +G  P  + YLRS     L EN  + +       +   
Sbjct: 334 LNNLFMLYLYNNQL--------SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNL 385

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILS 411
           +RL + + +LS       +IP EI     +T LDL  N++   +P  L +  +L  L L 
Sbjct: 386 SRLDLYNNKLS------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLY 439

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENP 469
            N++       +  LSSL+ L L NN L         ++  L +L L  N    S+PE  
Sbjct: 440 NNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI 499

Query: 470 PFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELD 527
            +  L  L EL+L    L  + P  +  L  L  L L  N L  SIP  F N+ +L  L 
Sbjct: 500 GY--LSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLF 557

Query: 528 LSDNNISALPPELV 541
           LSDN++    P  V
Sbjct: 558 LSDNDLIGEIPSFV 571



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 237/531 (44%), Gaps = 96/531 (18%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++  N LS  +PA++G L+ L  LD+  N +
Sbjct: 240 NLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKL 299

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT----------- 150
              IP+EIG   +L   D   N L   +P+SLG   NL      NN ++           
Sbjct: 300 SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLR 359

Query: 151 --------------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                         S+P  L + + +S+LD+  NKL+      I     LT L   +N L
Sbjct: 360 SLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENAL 419

Query: 197 NG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           NG +P ++G+L+ L  L L+ N++  SIP  I    SL E Y+GNN+L+  +PA LG L+
Sbjct: 420 NGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLN 479

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  L L++NQL                        +P EIG +++L +L L  N L   
Sbjct: 480 NLFMLYLYNNQLS---------------------GSIPEEIGYLSSLTELFLGNNSL--- 515

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                NG  PA L  L +                     +RL + + +LS       +IP
Sbjct: 516 -----NGSIPASLGNLNN--------------------LSRLYLYNNQLS------GSIP 544

Query: 374 SEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           +       +  L LS N  I E+P  + +  SL+ L +SRN +K      L ++S L  L
Sbjct: 545 ASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHIL 604

Query: 433 KLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLRE 489
            + +N  R ++PS    ++  L+ILD   N    ++P+   F ++  LQ   ++  +L  
Sbjct: 605 SMSSNSFRGELPSS-ISNLTSLKILDFGRNNLEGAIPQ--FFGNISSLQVFDMQNNKLSG 661

Query: 490 A-PTDILRLQQLRILDLSQNSL-QSIPEGFKNLTSLTELDLSDNNISALPP 538
             PT+      L  L+L  N L   IP    N   L  LDL DN ++   P
Sbjct: 662 TLPTNFSIGCSLISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFP 712



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 77/490 (15%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L + +N L   +PA++G L+ L  L +  N +
Sbjct: 432 NLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQL 491

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG  ++L +    +N L   +P+SLG   NLS     NN ++ S+P    +  
Sbjct: 492 SGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMR 551

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  N L     + + + T L  L  S+N L G +P+ +G++S L  L +  N  
Sbjct: 552 NLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSF 611

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKL-----------GTL-------- 258
              +PSSIS   SL     G N L  A+P   G +S L           GTL        
Sbjct: 612 RGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGC 671

Query: 259 -----DLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNP 309
                +LH N+L +     ++ C+ +L VLDL +N L+   P  +G +  LR L LT N 
Sbjct: 672 SLISLNLHGNELADEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNK 730

Query: 310 LRT-LRSSLVNGPTPAL---------------------LKYLRSRLPENEDSEASTTKED 347
           L   +RSS      P L                     LK +R+     E+    +  +D
Sbjct: 731 LHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDD 790

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQ 406
            + + T      K L LE + + ++          T +DLS N  +  +P  L    +++
Sbjct: 791 SVVVVT------KGLELEIVRILSL---------YTIIDLSSNKFEGHIPSVLGDLIAIR 835

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--AS 464
            L +S N ++ +  + L SLS L  L L  N L          +  L++L+LS+N     
Sbjct: 836 VLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGC 895

Query: 465 LPENPPFSSL 474
           +P+ P F + 
Sbjct: 896 IPQGPQFRTF 905



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 26/253 (10%)

Query: 70  LTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQLK 127
           L  LN+  N+L+ E+P ++     L+ LD+  N +    P  +G+   L     +SN+L 
Sbjct: 673 LISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLH 732

Query: 128 ELPSSLG--------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               S G        R ++LS    S +  TSL E L     + K   E +  +   +++
Sbjct: 733 GPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSV 792

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
           +         + +K L     E +  LS    +DL  N+    IPS +    ++    + 
Sbjct: 793 V---------VVTKGL---ELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVS 840

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIG 295
           +NAL   +P+ LG LS L +LDL  NQL     +  A    L VL+LS+N L G  P+  
Sbjct: 841 HNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQGP 900

Query: 296 KMTTLRKLLLTGN 308
           +  T       GN
Sbjct: 901 QFRTFESNSYEGN 913


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 KEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNFLPNK-VEQLQNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 173/404 (42%), Gaps = 73/404 (18%)

Query: 171 KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 26  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 85

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 86  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 145

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 146 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 191

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 192 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 229

Query: 400 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 437
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 289

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 290 QLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQ 346

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 347 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 46/398 (11%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP ++     +  L+++ N+L  L    I     L +L  SKN
Sbjct: 52  RILNLSGSK-----LTTLPGEIGKLQNLQLLNLDDNQLIALPKE-IGKLQNLQQLHLSKN 105

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L  L +L L++N++ +IP  I    +L E  + +N L+ LP ++ +L +
Sbjct: 106 QLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQR 165

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++  L  L L  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +       +L +LR       +++ +T  +++  +     +   +  L     + +P
Sbjct: 226 PKEIGQLQNLQIL-HLR-------NNQLTTLPKEIGQLQNLQKLLLNKNKL-----TTLP 272

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + KL L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L 
Sbjct: 273 EEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI-GQLQRLQTLY 331

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L  +P+   + +  L+ LDL +N                        QL   P +
Sbjct: 332 LGNNQLNFLPNK-VEQLQNLESLDLEHN------------------------QLNALPKE 366

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           I +LQ+L+ L+L  N L ++PE  K L +L +L L +N
Sbjct: 367 IGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 98

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+G+L  L  L+L  NQL     
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 209

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 210 RN---------------------------LESLGLDHNQLNVLPKEIGQLQNLQILHLRN 242

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 243 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 300

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +LQ L  LDL  N
Sbjct: 301 LQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHN 358

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 359 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|413953385|gb|AFW86034.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 1007

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 232/485 (47%), Gaps = 51/485 (10%)

Query: 73  LNVSH-NKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KEL 129
           LN+S+ N   E+  AIG+L  L+ +D+  N +  +IPDEIG   +L   D S N L  ++
Sbjct: 77  LNLSNLNLGGEISPAIGQLKSLQFVDLKLNKLTGQIPDEIGDCVSLKYLDLSGNLLYGDI 136

Query: 130 PSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P S+ +   L D    NN +T  +P  L+    +  LD+  NKLT     LI    +L  
Sbjct: 137 PFSISKLKQLEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQY 196

Query: 189 LIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-L 245
           L    N L G +   +  L+ L   D+  N +  +IP  I  C S     +  N +S  +
Sbjct: 197 LGLRGNSLTGTLSPDMCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEI 256

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRK 302
           P  +G L ++ TL L  N+L     E   L   L+VLDLS N L G +PP +G ++   K
Sbjct: 257 PYNIGYL-QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK 315

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L         G  P  L  + S+L                   + L +   EL
Sbjct: 316 LYLHGNKL--------TGHIPPELGNM-SKL-------------------SYLQLNDNEL 347

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
                 +  IP+E+ +  E+ +L+L+ N+++  +P  +SSC++L    +  N++     A
Sbjct: 348 ------VGTIPAELGKLTELFELNLANNNLEGHIPANISSCSALNKFNVYGNRLNGSIPA 401

Query: 422 ILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
               L SL+ L L +N  + Q+PS+    I  L  LDLSYN  S P  P    L HL EL
Sbjct: 402 GFQKLESLTYLNLSSNSFKGQIPSE-LGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLEL 460

Query: 481 YLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LP 537
            L +  L    P +   L+ ++++D+S N+L   +PE    L +L  L L++N+++  +P
Sbjct: 461 NLSKNHLTGSVPAEFGNLRSVQVIDMSSNNLSGYLPEELGQLQNLDSLILNNNSLAGEIP 520

Query: 538 PELVS 542
            +L +
Sbjct: 521 AQLAN 525



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 37/426 (8%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ LIL +N +   +   L  +P L  L+++ NKL+ ++P  I    +L+ L +  NS+ 
Sbjct: 146 LEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQYLGLRGNSLT 205

Query: 105 KI--PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
               PD +   T L  FD   N L   +P  +G C +      S N I+  +P ++    
Sbjct: 206 GTLSPD-MCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEIPYNIGYL- 263

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
           +++ L ++GN+L      +I     L  L  S+N L G +P  +G+LS   +L LH N++
Sbjct: 264 QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKL 323

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYC---VEACQ 274
              IP  +     L+   + +N L   +PAELGKL++L  L+L +N L+ +    + +C 
Sbjct: 324 TGHIPPELGNMSKLSYLQLNDNELVGTIPAELGKLTELFELNLANNNLEGHIPANISSCS 383

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-- 331
             L+  ++  N L+G +P    K+ +L  L L+ N  +        G  P+ L ++ +  
Sbjct: 384 -ALNKFNVYGNRLNGSIPAGFQKLESLTYLNLSSNSFK--------GQIPSELGHIVNLD 434

Query: 332 --RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L  NE S         +     L+++   L+       ++P+E      +  +D+S 
Sbjct: 435 TLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLT------GSVPAEFGNLRSVQVIDMSS 488

Query: 390 NSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPSD-G 446
           N++   LP EL    +L +LIL+ N +     A L +  SL  L L  NN    VPS   
Sbjct: 489 NNLSGYLPEELGQLQNLDSLILNNNSLAGEIPAQLANCFSLVSLNLSYNNFSGHVPSSKN 548

Query: 447 FKDIPM 452
           F   PM
Sbjct: 549 FSKFPM 554



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 64  LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
            + L  LT LN+S N    ++P+ +G +  L +LD+S+N     +P  IG    L++ + 
Sbjct: 403 FQKLESLTYLNLSSNSFKGQIPSELGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNL 462

Query: 122 SSNQL-KELPSSLG--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           S N L   +P+  G  R + + D  +SNN    LPE+L     +  L +  N L      
Sbjct: 463 SKNHLTGSVPAEFGNLRSVQVIDM-SSNNLSGYLPEELGQLQNLDSLILNNNSLAGEIPA 521

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
            +A+   L  L  S N  +G   +  + S+        N +L +    S C
Sbjct: 522 QLANCFSLVSLNLSYNNFSGHVPSSKNFSKFPMESFMGNLMLHVYCQDSSC 572


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E             +  +  +L+KL L+ N I+ + +
Sbjct: 24  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 83

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 84  EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 143

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 144 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 202

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 203 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 262

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 263 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 322

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 323 ELFLNNNQL 331



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 27  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 86

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 87  KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 146

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 147 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 205

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 206 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 265

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 266 PKEIGQLKNLQVLDLGSNQLTTL 288



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 138

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 139 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 190

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 191 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 245

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 246 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQ 284

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 285 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 315



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 136 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 196 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 255

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 256 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 314

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 315 IGQLQNLQELFLNNNQLSS 333



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 2   QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 60

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 61  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 118

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + +LP+      L +L+ L L   Q++  P  I +LQ+L+ L L  N L ++P+ 
Sbjct: 119 LPKNQLTTLPQE--IGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 176

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L  LDLS N ++ LP E+
Sbjct: 177 IGQLQNLQSLDLSTNRLTTLPQEI 200


>gi|391331045|ref|XP_003739961.1| PREDICTED: protein LAP2-like [Metaseiulus occidentalis]
          Length = 544

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 183/407 (44%), Gaps = 45/407 (11%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLP-LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           E  D+Q L  +H  ++++  ++ N    L  L +  N+L ELP  +   H L+ L    N
Sbjct: 12  ETEDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRLTFQDN 71

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P  I S T L   D S N + E+P S+  C  LS   AS N I+ LPE       
Sbjct: 72  DVQHLPAAISSLTQLTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPESFTQLVS 131

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L +    L  L  NL    + L  L   +N L  +P+++  L++L+RLD+ QN  + 
Sbjct: 132 LEELYLNDTLLEFLPANL-GRLSKLRILELRENHLKALPKSMARLTQLVRLDIGQNDFVD 190

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 277
           +P  +    SL E +  +N LS LP  LG L +L  LD  +N++   C+E    +    L
Sbjct: 191 MPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRIS--CIEDNAFKNLTNL 248

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L +S+N L+  P  IGK+T L  L    N L  L  SL  G    L            
Sbjct: 249 VDLTVSSNRLTRFPETIGKLTKLTTLRADDNQLLGLPDSL--GYCSLL------------ 294

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                 +EL   G ++  +P  I    +++ L +  N + ELP 
Sbjct: 295 ----------------------EELIANGNHMEYLPGTIGLLRQLSLLMVDSNWLDELPA 332

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           E+ SC  L+ L    NK+ D PD I   LS+L  L +  N LR +P+
Sbjct: 333 EIGSCNELKILSARDNKLVDLPDEI-GHLSNLKVLSVSANRLRYLPA 378



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 26/297 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP---------------------- 84
           L  L L+ NNI ++ E +R   LL+ ++ S N +S+LP                      
Sbjct: 86  LTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPESFTQLVSLEELYLNDTLLEFL 145

Query: 85  -AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
            A +G L  L+ L++  N +  +P  +   T LV+ D   N   ++P  +G  ++L++  
Sbjct: 146 PANLGRLSKLRILELRENHLKALPKSMARLTQLVRLDIGQNDFVDMPEVVGSLVSLTELW 205

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +N ++ LP  L +  ++  LD   N+++ + +N   + T L +L  S N L   PETI
Sbjct: 206 CDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAFKNLTNLVDLTVSSNRLTRFPETI 265

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L++L  L    N++L +P S+  C  L E     N +  LP  +G L +L  L + SN
Sbjct: 266 GKLTKLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEYLPGTIGLLRQLSLLMVDSN 325

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L E   E  +C   L +L   +N L  LP EIG ++ L+ L ++ N LR L ++L 
Sbjct: 326 WLDELPAEIGSCN-ELKILSARDNKLVDLPDEIGHLSNLKVLSVSANRLRYLPATLT 381



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 185/461 (40%), Gaps = 89/461 (19%)

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC-SSNQLKELPSSLGRCLNLSDF 142
           P   GE   +++LD S  ++ ++P+EI +    ++  C  +NQL ELP  L  C  L   
Sbjct: 7   PCFKGETEDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRL 66

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N +  LP                          I+S T LT L  S+N ++ +PE+
Sbjct: 67  TFQDNDVQHLPA------------------------AISSLTQLTHLDLSRNNISEIPES 102

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I     L  +D   N I  +P S +   SL E Y+ +  L  LPA LG+LSKL  L+L  
Sbjct: 103 IRGCKLLSSVDASVNPISKLPESFTQLVSLEELYLNDTLLEFLPANLGRLSKLRILELRE 162

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N LK       +L +L  LD+  N    +P  +G + +L +L    N L  L        
Sbjct: 163 NHLKALPKSMARLTQLVRLDIGQNDFVDMPEVVGSLVSLTELWCDSNRLSYL-------- 214

Query: 322 TPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
            P  L  L+  R  +  ++  S  +++     T L     +L++    L+  P  I +  
Sbjct: 215 -PGFLGNLQQLRYLDASNNRISCIEDNAFKNLTNLV----DLTVSSNRLTRFPETIGKLT 269

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++T L    N +  LP  L  C+ L+ LI + N ++  P  I   L  LS L +D+N   
Sbjct: 270 KLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEYLPGTI-GLLRQLSLLMVDSN--- 325

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
                                                         L E P +I    +L
Sbjct: 326 ---------------------------------------------WLDELPAEIGSCNEL 340

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +IL    N L  +P+   +L++L  L +S N +  LP  L 
Sbjct: 341 KILSARDNKLVDLPDEIGHLSNLKVLSVSANRLRYLPATLT 381


>gi|413953386|gb|AFW86035.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 985

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 232/485 (47%), Gaps = 51/485 (10%)

Query: 73  LNVSH-NKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KEL 129
           LN+S+ N   E+  AIG+L  L+ +D+  N +  +IPDEIG   +L   D S N L  ++
Sbjct: 77  LNLSNLNLGGEISPAIGQLKSLQFVDLKLNKLTGQIPDEIGDCVSLKYLDLSGNLLYGDI 136

Query: 130 PSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P S+ +   L D    NN +T  +P  L+    +  LD+  NKLT     LI    +L  
Sbjct: 137 PFSISKLKQLEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQY 196

Query: 189 LIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-L 245
           L    N L G +   +  L+ L   D+  N +  +IP  I  C S     +  N +S  +
Sbjct: 197 LGLRGNSLTGTLSPDMCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEI 256

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRK 302
           P  +G L ++ TL L  N+L     E   L   L+VLDLS N L G +PP +G ++   K
Sbjct: 257 PYNIGYL-QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK 315

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L GN L         G  P          PE  +          ++  + L +   EL
Sbjct: 316 LYLHGNKL--------TGHIP----------PELGN----------MSKLSYLQLNDNEL 347

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
                 +  IP+E+ +  E+ +L+L+ N+++  +P  +SSC++L    +  N++     A
Sbjct: 348 ------VGTIPAELGKLTELFELNLANNNLEGHIPANISSCSALNKFNVYGNRLNGSIPA 401

Query: 422 ILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
               L SL+ L L +N  + Q+PS+    I  L  LDLSYN  S P  P    L HL EL
Sbjct: 402 GFQKLESLTYLNLSSNSFKGQIPSE-LGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLEL 460

Query: 481 YLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LP 537
            L +  L    P +   L+ ++++D+S N+L   +PE    L +L  L L++N+++  +P
Sbjct: 461 NLSKNHLTGSVPAEFGNLRSVQVIDMSSNNLSGYLPEELGQLQNLDSLILNNNSLAGEIP 520

Query: 538 PELVS 542
            +L +
Sbjct: 521 AQLAN 525



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 37/426 (8%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ LIL +N +   +   L  +P L  L+++ NKL+ ++P  I    +L+ L +  NS+ 
Sbjct: 146 LEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQNKLTGDIPRLIYWNEVLQYLGLRGNSLT 205

Query: 105 KI--PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
               PD +   T L  FD   N L   +P  +G C +      S N I+  +P ++    
Sbjct: 206 GTLSPD-MCQLTGLWYFDIRGNNLTGTIPEGIGNCTSFEILDISYNQISGEIPYNIGYL- 263

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
           +++ L ++GN+L      +I     L  L  S+N L G +P  +G+LS   +L LH N++
Sbjct: 264 QVATLSLQGNRLIGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKL 323

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYC---VEACQ 274
              IP  +     L+   + +N L   +PAELGKL++L  L+L +N L+ +    + +C 
Sbjct: 324 TGHIPPELGNMSKLSYLQLNDNELVGTIPAELGKLTELFELNLANNNLEGHIPANISSCS 383

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-- 331
             L+  ++  N L+G +P    K+ +L  L L+ N  +        G  P+ L ++ +  
Sbjct: 384 -ALNKFNVYGNRLNGSIPAGFQKLESLTYLNLSSNSFK--------GQIPSELGHIVNLD 434

Query: 332 --RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L  NE S         +     L+++   L+       ++P+E      +  +D+S 
Sbjct: 435 TLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLT------GSVPAEFGNLRSVQVIDMSS 488

Query: 390 NSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPSD-G 446
           N++   LP EL    +L +LIL+ N +     A L +  SL  L L  NN    VPS   
Sbjct: 489 NNLSGYLPEELGQLQNLDSLILNNNSLAGEIPAQLANCFSLVSLNLSYNNFSGHVPSSKN 548

Query: 447 FKDIPM 452
           F   PM
Sbjct: 549 FSKFPM 554



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 64  LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
            + L  LT LN+S N    ++P+ +G +  L +LD+S+N     +P  IG    L++ + 
Sbjct: 403 FQKLESLTYLNLSSNSFKGQIPSELGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNL 462

Query: 122 SSNQL-KELPSSLG--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           S N L   +P+  G  R + + D  +SNN    LPE+L     +  L +  N L      
Sbjct: 463 SKNHLTGSVPAEFGNLRSVQVIDM-SSNNLSGYLPEELGQLQNLDSLILNNNSLAGEIPA 521

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
            +A+   L  L  S N  +G   +  + S+        N +L +    S C
Sbjct: 522 QLANCFSLVSLNLSYNNFSGHVPSSKNFSKFPMESFMGNLMLHVYCQDSSC 572


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 181/348 (52%), Gaps = 33/348 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--DLQKLI------LA 53
           +L+ ART   L L    ++D+P + ++     + G  D   + +  D+ + +      ++
Sbjct: 36  VLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNIS 95

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N+I +L E+++    L VL++S N L++LP  I +L  +K L+++  S++++P +IG+ 
Sbjct: 96  RNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNL 155

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L   +C  N L+ +P +L     L      NN + SLP+ L++ + +  L ++GN LT
Sbjct: 156 SKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLT 215

Query: 174 VLSNNL----------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
            L +++                      I     +T+L  S N ++ +PE+IG L  L  
Sbjct: 216 SLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSI 275

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L + QNRI  +PSSI    ++ E  +  N L+ LPA +G L K+ TL++  NQL+    E
Sbjct: 276 LKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPE 335

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             +   L++L + +N L+ LP E+G  T LR L ++GN L  L  SL 
Sbjct: 336 LGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISLA 383



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 24/239 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N +E L + L  L  L  L +  N L+ LP +IG+LH +  +D+S N +  +
Sbjct: 181 LEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESV 240

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG   ++     S N +  LP S+G+   LS  K   N I+ LP  + D        
Sbjct: 241 PETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGD-------- 292

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                           W  +TEL+ ++NLL  +P +IG+L ++  L++ +N++  +P  +
Sbjct: 293 ----------------WPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPEL 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C SL    + +N L+ LP ELG  + L  L++  N+L    +    L+L  L LS N
Sbjct: 337 GKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISLASLKLKALWLSEN 395



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 175/379 (46%), Gaps = 52/379 (13%)

Query: 96  LDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLS-------------- 140
           +D   +S++ +P+++   A  L +    +NQ+K+LP    R + L               
Sbjct: 22  IDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPA 81

Query: 141 ---------DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
                    D   S N I  LPE++  C  +  LD+ GN LT L + +        +L+ 
Sbjct: 82  DIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGIC-------QLVC 134

Query: 192 SKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
            K+L      L  MP+ IG+LS+L  ++  +N + SIP ++     L +  +GNN L +L
Sbjct: 135 MKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESL 194

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  L +L+ L  L L  N L        +L  +  +DLS N L  +P  IG + ++  L 
Sbjct: 195 PDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLT 254

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L+ N +  L  S+    T ++LK  ++R+     S+  ++  D   +         EL L
Sbjct: 255 LSHNFIDALPESIGKLKTLSILKVDQNRI-----SKLPSSIGDWPNIT--------ELML 301

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L+ +P+ I    ++T L++ RN ++ LPPEL  C+SL  L +  N +   P   L 
Sbjct: 302 TENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTE-LG 360

Query: 425 SLSSLSCLKLDNNPLRQVP 443
           + ++L  L +  N L  +P
Sbjct: 361 NATNLRVLNVSGNRLDCLP 379



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 24/388 (6%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           DC     +D   + L V+  +++     L EL+   N +  +P+    L +L +L L  N
Sbjct: 20  DC-----IDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDN 74

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
            +  IP+ I+    L +  +  N ++ LP  +     L  LD+  N L +     CQL  
Sbjct: 75  ELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVC 134

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           +  L+L++ SL  +P +IG ++ L+ +    N L+++  +L +      L    + L   
Sbjct: 135 MKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESL 194

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            DS         ++  T L    ++L L+G +L+++P  I +   I  +DLS N ++ +P
Sbjct: 195 PDS---------LSELTNL----RDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVP 241

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             +    S+  L LS N I   P++I   L +LS LK+D N + ++PS    D P +  L
Sbjct: 242 ETIGDLHSITDLTLSHNFIDALPESI-GKLKTLSILKVDQNRISKLPS-SIGDWPNITEL 299

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L+ N +  LP +    +L  +  L + R QL   P ++ +   L IL +  N L  +P 
Sbjct: 300 MLTENLLTELPAS--IGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPT 357

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
              N T+L  L++S N +  LP  L S+
Sbjct: 358 ELGNATNLRVLNVSGNRLDCLPISLASL 385


>gi|431908903|gb|ELK12494.1| Leucine-rich repeat and death domain-containing protein LOC401387
           [Pteropus alecto]
          Length = 827

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 262/572 (45%), Gaps = 61/572 (10%)

Query: 13  SLNLSNRSLRDVPNEV-------YKNFDE----AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++       Y   DE    + EG +  +   L+ L L  N +    
Sbjct: 150 TVNLKAKGLQEFPKDILKIKYVKYLYLDENQIKSFEGAESCDLTGLEILSLQDNGLSTFP 209

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            +++ L  L +LNVSHN++S +P  I +L  ++ L ++ N I   P  + S   L     
Sbjct: 210 SEIQLLHNLKILNVSHNQISHIPKEISQLRNIRQLFLNNNYIENFPSGLESLRNLEILSL 269

Query: 122 SSNQLKELPSSLGRCLNLS-----------------------DFKASNNCITSLPEDLAD 158
           + N L+ +P++L    NLS                           + N I+SLP+++ +
Sbjct: 270 AKNNLRYIPNTLCILKNLSVLNLEYNQLTIFPKVLCFLPKLISLNLTGNLISSLPKEIRE 329

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              + KL ++ NKLT L   +     M  EL  + N +  +   I +   L  L L +N 
Sbjct: 330 LKNLEKLLMDHNKLTFLPVEIFRLLKM-QELQLTDNKIEVISHKIENFKELRILILDKNL 388

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           +  IP  IS C  L    + +N L+ LP  + KL  L  L ++ N +     +   L  +
Sbjct: 389 LKEIPEKISHCVMLECLSLSDNKLTELPKNIHKLKSLRKLHVNRNNIVRIPEDISYLNNM 448

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++ +P EI     + K+ L+ N +      L    +   L YL   +  N 
Sbjct: 449 FSLEFSGNIITDVPIEIKNCRKITKVKLSYNKIIHFPVGLCALDS---LHYL--NINGNY 503

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSE-IWEAGEITKLDLSRNSIQEL 395
            SE          +   +S + + L LE   N   I SE +    ++  LDL +N I+++
Sbjct: 504 ISE----------VPVDISFSKQLLHLEFNENKLLIFSEHLCSLIKLQYLDLGKNQIRKI 553

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +S+ ASL  LIL  NK + +P  + T L++L  L    N ++++PS+   ++  +Q 
Sbjct: 554 PACISNMASLHVLILCCNKFETFPIDVCT-LANLQVLDFSENQIKKIPSE-ICNLKGIQK 611

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQ 511
           L++S N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++
Sbjct: 612 LNISNNQFIYFP--IELCQLQSLEELNISQINGTKLTRLPEELFNMTQLKRLDISNNAIR 669

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            IP     L SL  L+  +N IS LPP  +S+
Sbjct: 670 EIPRNIGELKSLVSLNAYNNQISYLPPSFLSL 701



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 248/541 (45%), Gaps = 31/541 (5%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LN+S+  +  +P E+   +N  +    + + E          +L+ L LA NN+  +   
Sbjct: 221 LNVSHNQISHIPKEISQLRNIRQLFLNNNYIENFPSGLESLRNLEILSLAKNNLRYIPNT 280

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  L  L+VLN+ +N+L+  P  +  L  L SL+++ N I  +P EI     L K     
Sbjct: 281 LCILKNLSVLNLEYNQLTIFPKVLCFLPKLISLNLTGNLISSLPKEIRELKNLEKLLMDH 340

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  + R L + + + ++N I  +   + +  ++  L ++ N L  +    I+  
Sbjct: 341 NKLTFLPVEIFRLLKMQELQLTDNKIEVISHKIENFKELRILILDKNLLKEIPEK-ISHC 399

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            ML  L  S N L  +P+ I  L  L +L +++N I+ IP  IS   ++       N ++
Sbjct: 400 VMLECLSLSDNKLTELPKNIHKLKSLRKLHVNRNNIVRIPEDISYLNNMFSLEFSGNIIT 459

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +P E+    K+  + L  N++  + V  C L  L  L+++ N +S +P +I     L  
Sbjct: 460 DVPIEIKNCRKITKVKLSYNKIIHFPVGLCALDSLHYLNINGNYISEVPVDISFSKQLLH 519

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L    N L      L      +L+K     L +N+  +      ++ ++   +   +K  
Sbjct: 520 LEFNENKLLIFSEHLC-----SLIKLQYLDLGKNQIRKIPACISNMASLHVLILCCNK-- 572

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
                     P ++     +  LD S N I+++P E+ +   +Q L +S N+   +P  +
Sbjct: 573 ------FETFPIDVCTLANLQVLDFSENQIKKIPSEICNLKGIQKLNISNNQFIYFPIEL 626

Query: 423 --LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
             L SL  L+  +++   L ++P + F ++  L+ LD+S N I  +P N     L  L  
Sbjct: 627 CQLQSLEELNISQINGTKLTRLPEELF-NMTQLKRLDISNNAIREIPRN--IGELKSLVS 683

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L     Q+   P   L L  L+ L+LS N+L ++P G  NL SL +++  DN +   P E
Sbjct: 684 LNAYNNQISYLPPSFLSLNDLQQLNLSGNNLTALPSGIYNLFSLKDINFDDNPLLRPPME 743

Query: 540 L 540
           +
Sbjct: 744 I 744



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 8/219 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + LQ L L  N I K+   + N+  L VL +  NK    P  +  L  L+ LD S N I 
Sbjct: 538 IKLQYLDLGKNQIRKIPACISNMASLHVLILCCNKFETFPIDVCTLANLQVLDFSENQIK 597

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLPEDLADC 159
           KIP EI +   + K + S+NQ    P  L +      LN+S    +   +T LPE+L + 
Sbjct: 598 KIPSEICNLKGIQKLNISNNQFIYFPIELCQLQSLEELNISQINGTK--LTRLPEELFNM 655

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +++ +LD+  N +  +  N I     L  L A  N ++ +P +  SL+ L +L+L  N +
Sbjct: 656 TQLKRLDISNNAIREIPRN-IGELKSLVSLNAYNNQISYLPPSFLSLNDLQQLNLSGNNL 714

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
            ++PS I    SL +    +N L   P E+ K  +L T+
Sbjct: 715 TALPSGIYNLFSLKDINFDDNPLLRPPMEICKGKQLYTI 753


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 171/369 (46%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 191

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 192 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 251

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 252 NKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT--------- 302

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P+++ +   
Sbjct: 303 -----------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQN 335

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 336 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 392

Query: 442 VPSDGFKDI 450
            PS+  + I
Sbjct: 393 -PSEKIERI 400



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 85  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 145 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 204

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 205 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 263

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 324 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 383

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 384 KLYLHNNPL 392



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 26  NITEVLKNPQNVRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 84

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+G+L  L  L+L  NQL     
Sbjct: 85  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 145 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 195

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 196 RNL---------------------------ESLGLDHNQLNVLPKEIGQLQNLQILHLRN 228

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 229 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 286

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +LQ L  LDL  N
Sbjct: 287 LQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHN 344

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 345 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 376


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 2/222 (0%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  ++  +P+ IG  T L +     NQL  LP S+G+   L+     +N +  LPE 
Sbjct: 23  LDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPES 82

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           ++  ++++ L +  N+L VL  + I+  T LTEL  S N L  +PE+IG L++L RLDLH
Sbjct: 83  ISQLTQLTSLSLHDNQLAVLPES-ISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLH 141

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++  +P SI     L    + NN L+ LP  +G+L++L  LDL +NQL +      QL
Sbjct: 142 TNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQL 201

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            +L+ LDL NN L+ LP  IG++T LR+L L  N L  L  S
Sbjct: 202 TQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLPKS 243



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 164/334 (49%), Gaps = 20/334 (5%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           N+  L E +  L  LT L +  N+L+ LP +IG+L  L  L +  N +  +P+ I   T 
Sbjct: 29  NLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQ 88

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L       NQL  LP S+ +   L++   S N +T LPE +   +++++LD+  N+LTVL
Sbjct: 89  LTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVL 148

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
             + I   T LT L  S N L  +PE+IG L++L  LDL  N++  +P SI     L E 
Sbjct: 149 PES-IGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTEL 207

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSLSGLPPEI 294
            + NN L+ LP  +G+L++L  L LH+N+L            L +LDL  N+  G+PPE+
Sbjct: 208 DLRNNELTTLPESIGQLTQLRELSLHTNELTVLPKSLQHLTLLRLLDLRGNTDLGIPPEV 267

Query: 295 GK--------MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            +        +    +LL    PL   +  LV G        L +RL  N+ ++     E
Sbjct: 268 IEDRFDSDRILDYYFRLLEDRRPLNEAKLILV-GRGEVGKTSLVNRLVYNQFNQGEEKTE 326

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                   +S+T  +L L G    A+   IW+ G
Sbjct: 327 G-------ISITKWDLMLHGH--EAVRLNIWDFG 351



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 1/200 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L E +  L  LT L++  N+L+ LP +I +L  L SL +  N +  +
Sbjct: 43  LTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVL 102

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I   T L + D S+NQL  LP S+G+   L+      N +T LPE +   +++++LD
Sbjct: 103 PESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLD 162

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L  + I   T LTEL    N L  +PE+IG L++L  LDL  N + ++P SI
Sbjct: 163 LSNNQLTDLPES-IGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESI 221

Query: 227 SGCCSLAEFYMGNNALSALP 246
                L E  +  N L+ LP
Sbjct: 222 GQLTQLRELSLHTNELTVLP 241



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 1/203 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L E +  L  LT L++  N+L+ LP +I +L  L  LD+S N +  +
Sbjct: 66  LTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVL 125

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L + D  +NQL  LP S+G+   L+    SNN +T LPE +   +++++LD
Sbjct: 126 PESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELD 185

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L  + I   T LTEL    N L  +PE+IG L++L  L LH N +  +P S+
Sbjct: 186 LPNNQLTDLPES-IGQLTQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLPKSL 244

Query: 227 SGCCSLAEFYMGNNALSALPAEL 249
                L    +  N    +P E+
Sbjct: 245 QHLTLLRLLDLRGNTDLGIPPEV 267



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 118/260 (45%), Gaps = 41/260 (15%)

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           +LDLS  +LS LP  IG++T L +L L  N L  L  S+                     
Sbjct: 22  ILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQ------------------- 62

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     +T  TRLS+   +L++       +P  I +  ++T L L  N +  LP  
Sbjct: 63  ----------LTQLTRLSLHDNQLAV-------LPESISQLTQLTSLSLHDNQLAVLPES 105

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +S    L  L LS N++   P++I   L+ L+ L L  N L  +P +    +  L  LDL
Sbjct: 106 ISQLTQLTELDLSTNQLTVLPESI-GQLNQLTRLDLHTNQLTVLP-ESIGQLTQLTRLDL 163

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           S N +  LPE+     L  L EL L   QL + P  I +L QL  LDL  N L ++PE  
Sbjct: 164 SNNQLTDLPES--IGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESI 221

Query: 518 KNLTSLTELDLSDNNISALP 537
             LT L EL L  N ++ LP
Sbjct: 222 GQLTQLRELSLHTNELTVLP 241



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 24/217 (11%)

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           + +E L  +    S  S+ L L G+NLS++P  I +  ++T+L L  N +  LP  +   
Sbjct: 4   SMREALRRIKNTRSKLSEILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQL 63

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
             L  L L  N++   P++I + L+ L+ L L +N L  +P +    +  L  LDLS N 
Sbjct: 64  TQLTRLSLHDNQLAVLPESI-SQLTQLTSLSLHDNQLAVLP-ESISQLTQLTELDLSTNQ 121

Query: 462 IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +  LPE+                          L  L  L L   QL + P  I +L QL
Sbjct: 122 LTVLPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQL 181

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             LDL  N L  +PE    LT LTELDL +N ++ LP
Sbjct: 182 TELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLP 218


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 23/287 (8%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           +   L E L+N   + VL+++  KL+ LP  IG L  L+ LD+SFN+I  +P EIG+  +
Sbjct: 25  DFHTLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQS 84

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   +   N+L  LP  +G+  +L       N +T+LP+++     + +L +  N+LT +
Sbjct: 85  LQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTI 144

Query: 176 SNNL----------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
                                     I     L E+ ++ N L  +P+ IG+L  L +L 
Sbjct: 145 PKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLY 204

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N+I  +P  I     L + Y+ +N ++ LP E+G L KL  L L  NQL     E  
Sbjct: 205 LSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIG 264

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           QLR L VL L +N+L+ +P EIGK+  L+ L L  N L TL   + N
Sbjct: 265 QLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIEN 311



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 25/287 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L+ N I  L +++ NL  L  LN+  N+L+ LP  IG+L  L+ L +  N +  +
Sbjct: 62  LQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTL 121

Query: 107 PDEIGSATA-----------------------LVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P EIG   +                       L +   S NQL  +P  + +  NL +  
Sbjct: 122 PKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMD 181

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
           ++NN + +LP+++ +   + KL +  NK+T+L    I +   L +L  S N +  +P+ I
Sbjct: 182 SNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE-IGNLQHLQKLYLSSNKITILPKEI 240

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L +L  L L  N++ ++P  I    +L   Y+ +N L+ +P E+GKL  L TL L  N
Sbjct: 241 GNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRN 300

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L     E   L+ L  LDLSNN L+  P EIGK+  L+ L L   P
Sbjct: 301 KLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWLRLENIP 347



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 69/349 (19%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG+L  L +LDL  N I  +P  I    SL +  +  N L+ LP E+GKL  L
Sbjct: 49  LTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSL 108

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
             L L  NQL                      + LP EIGK+ +L++L+L  N L T+  
Sbjct: 109 QRLTLWENQL----------------------TTLPKEIGKLQSLQELILGKNQLTTIPK 146

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                     L+YL+                               LSL    L+AIP E
Sbjct: 147 EFWQ------LQYLQR------------------------------LSLSFNQLTAIPKE 170

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   + ++D + N ++ LP E+ +   LQ L LS NKI   P  I  +L  L  L L 
Sbjct: 171 IEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEI-GNLQHLQKLYLS 229

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           +N +  +P    K+I  LQ L+  Y     + +LP+      L +L+ LYL    L   P
Sbjct: 230 SNKITILP----KEIGNLQKLEYLYLEVNQLTTLPKE--IGQLRNLKVLYLDHNNLANIP 283

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +I +LQ L+ L L +N L ++P+  +NL SL  LDLS+N +++ P E+
Sbjct: 284 KEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPEEI 332



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 106/204 (51%), Gaps = 9/204 (4%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D+E   T  + +   T++ V    L L    L+A+P EI     + KLDLS N+I  LP 
Sbjct: 22  DAEDFHTLNEALQNPTQVRV----LHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQ 77

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+ +  SLQ L L  N++   P  I   L SL  L L  N L  +P +  K +  LQ L 
Sbjct: 78  EIGNLQSLQDLNLWENELTTLPKEI-GKLQSLQRLTLWENQLTTLPKEIGK-LQSLQELI 135

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + ++P+   F  L +LQ L L   QL   P +I +LQ L+ +D + N L+++P+ 
Sbjct: 136 LGKNQLTTIPKE--FWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKE 193

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
             NL  L +L LS N I+ LP E+
Sbjct: 194 IGNLQHLQKLYLSSNKITILPKEI 217


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 2/273 (0%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+  +L++L L +N +  L +++  L  L +L++  N+L+ LP  IG+L  L+ LD++ N
Sbjct: 41  WQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNN 100

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG    L      +NQL  LP  + +  NL D   S N  T LP+++     
Sbjct: 101 QLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQN 160

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L    I     L ELI   + L  +P+ IG L  L  L L  N++  
Sbjct: 161 LGSLIMRHNQLKTLPKE-IGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTI 219

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L      NN L+ LP E+G L  L TLDL +NQLK    E  QL+ L  L
Sbjct: 220 LPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLREL 279

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            LS N L  LP E+G++  LR L L  N L TL
Sbjct: 280 YLSANQLKTLPKEVGQLKNLRDLSLDNNQLETL 312



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 155/347 (44%), Gaps = 42/347 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++   KL+ LP  I +L  L+ L +  N +  +P EIG    L      +NQL  LP 
Sbjct: 25  VLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPK 84

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
            +G+  NL     +NN +T+LP+++     +  L +  N+LTVL   +   W +  L +L
Sbjct: 85  EIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEI---WQLKNLEDL 141

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N    +P+ IG L  L  L +  N++ ++P  I    +L E  + ++ L  LP E+
Sbjct: 142 DLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEI 201

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L L +NQL     E  QL+ L  L   NN L+ LP EIG +  L  L L  N
Sbjct: 202 GQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNN 261

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+TL   +        LK LR                              EL L    
Sbjct: 262 QLKTLPKEV------GQLKNLR------------------------------ELYLSANQ 285

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           L  +P E+ +   +  L L  N ++ LP E+    +L+ L L  N I
Sbjct: 286 LKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDANPI 332



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 23/265 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L +L++  N+L+ LP  I +L  L+ LD+S NS   
Sbjct: 91  NLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTI 150

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQLK LP  +G+  NL +    ++ + +LP+++     +  L
Sbjct: 151 LPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHL 210

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L   +     +LT L +  N L  +P+ IG L  L+ LDL  N++ ++P  
Sbjct: 211 SLRNNQLTILPKEIEQLKNLLT-LSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKE 269

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +    +L E Y+  N L  LP E+G+L  L                        L L NN
Sbjct: 270 VGQLKNLRELYLSANQLKTLPKEVGQLKNLRD----------------------LSLDNN 307

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  LP E+G++  LR L L  NP+
Sbjct: 308 QLETLPKEVGQLKNLRWLFLDANPI 332



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 161/346 (46%), Gaps = 45/346 (13%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL + ++  +P  I    +L E  + NN L+ LP E+G L  L  L L++NQL     E
Sbjct: 26  LDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKE 85

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  LDL+NN L+ LP EIG +  L+ L L  N L  L   +        LK L 
Sbjct: 86  IGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQ------LKNL- 138

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGE 381
                          EDL       ++  KE+          +    L  +P EI +   
Sbjct: 139 ---------------EDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKN 183

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L L  + ++ LP E+     LQ L L  N++   P  I   L +L  L  DNN L  
Sbjct: 184 LGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEI-EQLKNLLTLSSDNNQLTV 242

Query: 442 VPSDGFKDIPMLQ---ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           +P    K+I +LQ    LDL  N + +LP+      L +L+ELYL   QL+  P ++ +L
Sbjct: 243 LP----KEIGLLQNLVTLDLRNNQLKTLPKE--VGQLKNLRELYLSANQLKTLPKEVGQL 296

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + LR L L  N L+++P+    L +L  L L  N I  LP +L  +
Sbjct: 297 KNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDANPI--LPKKLKRI 340



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 155/342 (45%), Gaps = 40/342 (11%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ + S    K L  +L   L++         +T LP+++     + +L ++ N+LT L 
Sbjct: 1   MQAEQSGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTL- 59

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
                                  P+ IG L  L  L L+ N++  +P  I    +L    
Sbjct: 60  -----------------------PKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLD 96

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + NN L+ LP E+G L  L  L L++NQL     E  QL+ L  LDLS NS + LP EIG
Sbjct: 97  LNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIG 156

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRSRLPENEDSEASTTKE 346
           ++  L  L++  N L+TL   +  G    L         LK L   + + +D +  + + 
Sbjct: 157 RLQNLGSLIMRHNQLKTLPKEI--GQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRN 214

Query: 347 DLITMATRLSVTSKE---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           + +T+  +     K    LS +   L+ +P EI     +  LDL  N ++ LP E+    
Sbjct: 215 NQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLK 274

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +L+ L LS N++K  P  +   L +L  L LDNN L  +P +
Sbjct: 275 NLRELYLSANQLKTLPKEV-GQLKNLRDLSLDNNQLETLPKE 315



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 13/159 (8%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G L L +  L+ +P E+              +  DLQ L L +N +  L +++  L  L 
Sbjct: 185 GELILEHSQLKTLPKEI-------------GQLKDLQHLSLRNNQLTILPKEIEQLKNLL 231

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L+  +N+L+ LP  IG L  L +LD+  N +  +P E+G    L +   S+NQLK LP 
Sbjct: 232 TLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPK 291

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +G+  NL D    NN + +LP+++     +  L ++ N
Sbjct: 292 EVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 12  GSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           GSL + +  L+ +P E+   KN  E               LIL H+ ++ L +++  L  
Sbjct: 162 GSLIMRHNQLKTLPKEIGQLKNLGE---------------LILEHSQLKTLPKEIGQLKD 206

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++ +N+L+ LP  I +L  L +L    N +  +P EIG    LV  D  +NQLK L
Sbjct: 207 LQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTL 266

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           P  +G+  NL +   S N + +LP+++     +  L ++ N+L  L
Sbjct: 267 PKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETL 312



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 11/207 (5%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E S T    +T A +  +  + L L    L+ +P EIW+   + +L L  N +  LP 
Sbjct: 2   QAEQSGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPK 61

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ--- 454
           E+    +L+ L L  N++   P  I   L +L  L L+NN L  +P    K+I +LQ   
Sbjct: 62  EIGLLQNLKILHLYANQLTILPKEI-GQLKNLEYLDLNNNQLTTLP----KEIGLLQNLK 116

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           IL L  N +  LP+      L +L++L L        P +I RLQ L  L +  N L+++
Sbjct: 117 ILHLYANQLTVLPKE--IWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTL 174

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P+    L +L EL L  + +  LP E+
Sbjct: 175 PKEIGQLKNLGELILEHSQLKTLPKEI 201


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 164/328 (50%), Gaps = 12/328 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           KL L  NPL + + + +    P  + Y 
Sbjct: 398 KLYLHNNPLPSEKIARIRKLLPQCIIYF 425



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 170/369 (46%), Gaps = 42/369 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + +LPED+    ++  L +  N+   +    I     L  L    N LN +P+ 
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE-IGQLQNLESLGLDHNQLNVLPKE 205

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+ 
Sbjct: 206 IGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNK 265

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T         
Sbjct: 266 NKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT--------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                      LPEN            I    RL      L L    L+ +P+++ +   
Sbjct: 317 -----------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQN 349

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL  
Sbjct: 350 LESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL-- 406

Query: 442 VPSDGFKDI 450
            PS+    I
Sbjct: 407 -PSEKIARI 414



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 98

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+G+L  L  L+L  NQL     
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 209

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 210 RN---------------------------LESLGLDHNQLNVLPKEIGQLQNLQILHLRN 242

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 243 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 300

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +LQ L  LDL  N
Sbjct: 301 LQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHN 358

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 359 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|320165725|gb|EFW42624.1| hypothetical protein CAOG_07756 [Capsaspora owczarzaki ATCC 30864]
          Length = 880

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 252/544 (46%), Gaps = 42/544 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL-KEDLRNLPLLT 71
           +L L+N  L  +P+  +                 L +L+L +N I  +       L  L 
Sbjct: 111 TLQLNNNWLSAIPSSAFTGLTA------------LIQLLLNNNQITTVPSSAFTGLTALQ 158

Query: 72  VLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKEL 129
           +L + +N+++ +   A   L  L++L +  N I+ +     S   AL      +NQ+  +
Sbjct: 159 ILYLHNNQIATVAINAFSGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTV 218

Query: 130 PSSLGRCLN-LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           P++    L+ L+  + +NN ++++P       + + +L ++ N++T +  N  +  T L 
Sbjct: 219 PANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALIQLRLDTNQITTVPANAFSGLTALI 278

Query: 188 ELIASKNLLNGMPETIGSL-SRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSAL 245
            L    N +  +     S  + L++L L+ N+I +IPSS ++G  +L + Y+ NN ++++
Sbjct: 279 YLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSALTGLSALTQLYLYNNQITSV 338

Query: 246 PAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPP-EIGKMTTLR 301
           PA     L+ L  L L +N +      A     +L+ LDLS N L+ +P      +T L 
Sbjct: 339 PANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALT 398

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +LLL  N L  + SS   G T  +  YL        +++ +T   +  T  T L     +
Sbjct: 399 QLLLFNNWLSAVPSSAFTGLTALIYLYL-------NNNQITTVAANAFTGLTAL----VQ 447

Query: 362 LSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWP 419
           L L G  ++ IP+  +     + +L L  N I  +     +    L  L LS N+I   P
Sbjct: 448 LQLYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLP 507

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHL 477
                 L++++ L L NN L  VPS  F  +  LQ L L YN  I ++  N  F+ L  L
Sbjct: 508 ANAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYL-YNNQITTVAAN-AFTGLTAL 565

Query: 478 QELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISA 535
            +L+L R Q+   P      L  L  L L+ N + +I    F +LT LT LD+S+N I++
Sbjct: 566 VQLHLYRNQITTIPASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITS 625

Query: 536 LPPE 539
           LP  
Sbjct: 626 LPAN 629



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 234/545 (42%), Gaps = 81/545 (14%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELP 130
           +  V+ N  S  P A+ +L +        N I  IP   +   +AL +    +NQ+  +P
Sbjct: 287 ITTVATNAFSG-PTALVQLQLYG------NQITTIPSSALTGLSALTQLYLYNNQITSVP 339

Query: 131 SSLGRCLN-LSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           ++    L  L+D + SNN ITS L       +K++ LD+  N+LT +     +  T LT+
Sbjct: 340 ANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQ 399

Query: 189 LIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIPS-SISGCCSLAEFYMGNNALSALP 246
           L+   N L+ +P +    L+ LI L L+ N+I ++ + + +G  +L +  +  N ++ +P
Sbjct: 400 LLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQLQLYGNQITTIP 459

Query: 247 AE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPP-EIGKMTTLRK 302
           A     LS L  L L+SN++    V A      LS+L+LSNN ++ LP      +T + +
Sbjct: 460 ASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPANAFAGLTAMTQ 519

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTS-- 359
           L L  N L  + SS   G T     YL +       + A T    L+ +   R  +T+  
Sbjct: 520 LSLYNNSLSAVPSSAFTGLTALQALYLYNNQITTVAANAFTGLTALVQLHLYRNQITTIP 579

Query: 360 ----------KELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP----------- 397
                      +L L    ++ I +  + +  ++T LD+S N I  LP            
Sbjct: 580 ASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQ 639

Query: 398 --------------ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
                           +   +LQ L L  N+I        TSL++L  L+L  N +  +P
Sbjct: 640 LHLYNNLFSTVPSSAFTGLTALQALFLFNNQISSVAANAFTSLTALIQLQLYGNLITTIP 699

Query: 444 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR------- 496
           +  F  +  L +L L  N  S   +  F+ L  L +L L   Q+   P +          
Sbjct: 700 AGAFSGLSKLNLLQLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIY 759

Query: 497 ------------------LQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALP 537
                             L  L+ L L+ N++ +I    F  LT+L  LDLSD+ I+++P
Sbjct: 760 LSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIP 819

Query: 538 PELVS 542
             + S
Sbjct: 820 ANVFS 824



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 223/486 (45%), Gaps = 45/486 (9%)

Query: 64  LRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIP-DEIGSATALVKFDC 121
              L  LT L + +N LS +P+ A   L  L  L ++ N I  +  +     TALV+   
Sbjct: 391 FSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQLQL 450

Query: 122 SSNQLKELPSSLGRCLN-LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNL 179
             NQ+  +P+S    L+ L      +N IT++  +     + +S L++  N++T L  N 
Sbjct: 451 YGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPANA 510

Query: 180 IASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIPS-SISGCCSLAEFYM 237
            A  T +T+L    N L+ +P +    L+ L  L L+ N+I ++ + + +G  +L + ++
Sbjct: 511 FAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLYNNQITTVAANAFTGLTALVQLHL 570

Query: 238 GNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEAC--QLRLSVLDLSNNSLSGLPP-E 293
             N ++ +PA     LS L  L L+SN++      A     +L+ LD+SNN ++ LP   
Sbjct: 571 YRNQITTIPASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITSLPANA 630

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
              +T + +L L  N   T+ SS   G T     +L +    +  + A T+   LI    
Sbjct: 631 FTGLTAMTQLHLYNNLFSTVPSSAFTGLTALQALFLFNNQISSVAANAFTSLTALI---- 686

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                  +L L G  ++ IP+  +    ++KL+L                    L L  N
Sbjct: 687 -------QLQLYGNLITTIPAGAFSG--LSKLNL--------------------LQLYNN 717

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
            +   P +  T L++L+ L+LD N +  VP++ F  +  L  L L  N  +      F+ 
Sbjct: 718 WLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLSLYGNQITTISASAFAG 777

Query: 474 LPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDN 531
           L  LQ LYL    +   A      L  L  LDLS + + SIP   F +L +L +L+L +N
Sbjct: 778 LTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNN 837

Query: 532 NISALP 537
            +SA+P
Sbjct: 838 WLSAVP 843



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 24/343 (6%)

Query: 206 LSRLIRLDLHQNRILSIPS-SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSN 263
           L+ L  + L  N+I ++P+ + SG  +L    + NN LSA+P+     L+ L  L L++N
Sbjct: 82  LTALTYMRLDTNQITTVPANAFSGLSTLNTLQLNNNWLSAIPSSAFTGLTALIQLLLNNN 141

Query: 264 QLKEYCVEACQ--LRLSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           Q+      A      L +L L NN ++ +       +T L+ L L  N + T+ ++  +G
Sbjct: 142 QITTVPSSAFTGLTALQILYLHNNQIATVAINAFSGLTALQTLYLYNNQIITVATNAFSG 201

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA- 379
              A L+ LR      + ++ +T   +  +  ++L      L L    LSAIPS  +   
Sbjct: 202 --LAALQVLRL-----DTNQITTVPANAFSGLSKL----NTLQLNNNWLSAIPSSAFTGL 250

Query: 380 GEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             + +L L  N I  +P    S   +L  L L  N+I        +  ++L  L+L  N 
Sbjct: 251 TALIQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQ 310

Query: 439 LRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           +  +PS     +  L  L L YN  I S+P N  FS L  L +L L    +     +   
Sbjct: 311 ITTIPSSALTGLSALTQLYL-YNNQITSVPAN-GFSGLTALTDLRLSNNTITSILANAFT 368

Query: 497 -LQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALP 537
            L +L  LDLS N L SIP G F  LT+LT+L L +N +SA+P
Sbjct: 369 GLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLFNNWLSAVP 411



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 6/198 (3%)

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP-ELSSC 402
              L  + T +  T+  L L+   +++I S  +     +T + L  N I  +P    S  
Sbjct: 47  SRSLTAIPTGIPATTTTLYLQSNQITSISSSAFTGLTALTYMRLDTNQITTVPANAFSGL 106

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
           ++L TL L+ N +   P +  T L++L  L L+NN +  VPS  F  +  LQIL L  N 
Sbjct: 107 STLNTLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQITTVPSSAFTGLTALQILYLHNNQ 166

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPE-GFKN 519
           IA++  N  FS L  LQ LYL   Q+    T+    L  L++L L  N + ++P   F  
Sbjct: 167 IATVAIN-AFSGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVPANAFSG 225

Query: 520 LTSLTELDLSDNNISALP 537
           L+ L  L L++N +SA+P
Sbjct: 226 LSKLNTLQLNNNWLSAIP 243



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 148/369 (40%), Gaps = 92/369 (24%)

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           G+P T  +L       L  N+I SI SS  +G  +L    +  N ++ +PA     S L 
Sbjct: 56  GIPATTTTL------YLQSNQITSISSSAFTGLTALTYMRLDTNQITTVPAN--AFSGLS 107

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRS 315
           TL+                    L L+NN LS +P      +T L +LLL  N + T+ S
Sbjct: 108 TLN-------------------TLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQITTVPS 148

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           S   G T   + YL                  + T+A          +  G+        
Sbjct: 149 SAFTGLTALQILYLH--------------NNQIATVAIN--------AFSGLT------- 179

Query: 376 IWEAGEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 +  L L  N I  +     S  A+LQ L L  N+I   P    + LS L+ L+L
Sbjct: 180 -----ALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVPANAFSGLSKLNTLQL 234

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR----- 488
           +NN L  +PS  F  +  L  L L  N I ++P N  FS L  L  LYL   Q+      
Sbjct: 235 NNNWLSAIPSSAFTGLTALIQLRLDTNQITTVPAN-AFSGLTALIYLYLYNNQITTVATN 293

Query: 489 --EAPTDILRLQ------------------QLRILDLSQNSLQSIPE-GFKNLTSLTELD 527
               PT +++LQ                   L  L L  N + S+P  GF  LT+LT+L 
Sbjct: 294 AFSGPTALVQLQLYGNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLR 353

Query: 528 LSDNNISAL 536
           LS+N I+++
Sbjct: 354 LSNNTITSI 362


>gi|443290345|ref|ZP_21029439.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
 gi|385886672|emb|CCH17513.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
          Length = 1135

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 25/289 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W A  L++L++  N + +L   +     LT LNV  NKL ELP A+     L+ LD+ +N
Sbjct: 113 WTA--LKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYN 170

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +PD + + T L       N+L  LP ++     L++    +N +T+LP+ +A  + 
Sbjct: 171 QVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVAAWTA 230

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +++L ++ N+LTVL    +A+WT L+ L    N L  +P+ + + + L  LDL+ N++  
Sbjct: 231 LNELHLDDNQLTVLPEA-VAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQLTV 289

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P +++    L + Y+ +N L+ALP  +G  +                       L+ L 
Sbjct: 290 LPDAVAAWTDLTDLYLESNRLTALPDAVGGWNA----------------------LTDLF 327

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
           +  N L+ LP  IG++  LR L++ GNPL     +     T ALL +LR
Sbjct: 328 MEGNDLTALPGAIGRLAKLRMLVVDGNPLPPEVLAAETEGTEALLAFLR 376



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 16/317 (5%)

Query: 95  SLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           SLD++ N++  +PD + +A T+L+  D SSN L  LP ++     L     S N +T+LP
Sbjct: 48  SLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDTVAAWTALERLVLSGNRLTALP 107

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + +A  + + +L ++ N+L  L +  +A WT LT+L   +N L  +P+ + + + L RLD
Sbjct: 108 DAVAAWTALKRLVMDRNRLGELPHA-VAGWTALTQLNVDRNKLGELPDAVAAWTALERLD 166

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEA 272
           +  N++ ++P +++    L   Y+ +N L+ALP  +   + L  L L SNQL       A
Sbjct: 167 MDYNQVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVA 226

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+ L L +N L+ LP  +   T L  L L  N L  L  ++       LL    ++
Sbjct: 227 AWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQ 286

Query: 333 LPENEDSEASTTK-EDLITMATRLSV---------TSKELSLEGMNLSAIPSEIWEAGEI 382
           L    D+ A+ T   DL   + RL+             +L +EG +L+A+P  I   G +
Sbjct: 287 LTVLPDAVAAWTDLTDLYLESNRLTALPDAVGGWNALTDLFMEGNDLTALPGAI---GRL 343

Query: 383 TKLDLSRNSIQELPPEL 399
            KL +       LPPE+
Sbjct: 344 AKLRMLVVDGNPLPPEV 360



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 3/270 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           D+  L LA+NN+  L + +      L VL++S N L+ LP  +     L+ L +S N + 
Sbjct: 45  DVVSLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDTVAAWTALERLVLSGNRLT 104

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD + + TAL +     N+L ELP ++     L+      N +  LP+ +A  + + +
Sbjct: 105 ALPDAVAAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALER 164

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N++  L +  +A+WT L  L    N L  +P+ + + + L  L L  N++ ++P 
Sbjct: 165 LDMDYNQVRALPDA-VAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPD 223

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDLS 283
           +++   +L E ++ +N L+ LP  +   ++L  L L SN+L       A    L++LDL 
Sbjct: 224 AVAAWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLY 283

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP  +   T L  L L  N L  L
Sbjct: 284 DNQLTVLPDAVAAWTDLTDLYLESNRLTAL 313



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 17/302 (5%)

Query: 145 SNNCITSLPEDLADC-SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
           +NN + +LP+ +A   + +  LD+  N LT L +  +A+WT L  L+ S N L  +P+ +
Sbjct: 52  ANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDT-VAAWTALERLVLSGNRLTALPDAV 110

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            + + L RL + +NR+  +P +++G  +L +  +  N L  LP  +   + L  LD+  N
Sbjct: 111 AAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYN 170

Query: 264 QLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           Q++      A   RL VL L +N L+ LP  +   T L +L L  N L  L  ++     
Sbjct: 171 QVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVA---- 226

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            A        L +N+     T   + +   T LS     L L    L+A+P  +     +
Sbjct: 227 -AWTALNELHLDDNQ----LTVLPEAVAAWTELS----GLHLRSNRLTALPDAVAAWTAL 277

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           T LDL  N +  LP  +++   L  L L  N++   PDA+    ++L+ L ++ N L  +
Sbjct: 278 TLLDLYDNQLTVLPDAVAAWTDLTDLYLESNRLTALPDAV-GGWNALTDLFMEGNDLTAL 336

Query: 443 PS 444
           P 
Sbjct: 337 PG 338



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 20/319 (6%)

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 279
           I ++ +G  +L    +    L+ L  +    + + +LDL +N L      V A    L V
Sbjct: 13  IDAATTGHVNLGGLGLTPEDLTELLRDTPAFADVVSLDLANNNLGTLPDAVAAAWTSLIV 72

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS+N L+ LP  +   T L +L+L+GN L  L  ++        L   R+RL E   +
Sbjct: 73  LDLSSNGLTALPDTVAAWTALERLVLSGNRLTALPDAVAAWTALKRLVMDRNRLGELPHA 132

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A  T                +L+++   L  +P  +     + +LD+  N ++ LP  +
Sbjct: 133 VAGWT-------------ALTQLNVDRNKLGELPDAVAAWTALERLDMDYNQVRALPDAV 179

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           ++   L  L L  N++   PDA+  + ++L+ L LD+N L  +P D       L  L L 
Sbjct: 180 AAWTRLDVLYLDDNELTALPDAV-AAWTALNELHLDSNQLTALP-DAVAAWTALNELHLD 237

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N +  LPE    ++   L  L+LR  +L   P  +     L +LDL  N L  +P+   
Sbjct: 238 DNQLTVLPE--AVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQLTVLPDAVA 295

Query: 519 NLTSLTELDLSDNNISALP 537
             T LT+L L  N ++ALP
Sbjct: 296 AWTDLTDLYLESNRLTALP 314



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 162/391 (41%), Gaps = 44/391 (11%)

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           +NL     +   +T L  D    + +  LD+  N L  L + + A+WT L  L  S N L
Sbjct: 21  VNLGGLGLTPEDLTELLRDTPAFADVVSLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGL 80

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+T+ + + L RL L  NR+ ++P +++   +L    M  N L  LP  +   + L 
Sbjct: 81  TALPDTVAAWTALERLVLSGNRLTALPDAVAAWTALKRLVMDRNRLGELPHAVAGWTALT 140

Query: 257 TLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L++  N+L E     A    L  LD+  N +  LP  +   T L  L L  N L  L  
Sbjct: 141 QLNVDRNKLGELPDAVAAWTALERLDMDYNQVRALPDAVAAWTRLDVLYLDDNELTAL-- 198

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                                          D +   T L+    EL L+   L+A+P  
Sbjct: 199 ------------------------------PDAVAAWTALN----ELHLDSNQLTALPDA 224

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           +     + +L L  N +  LP  +++   L  L L  N++   PDA+  + ++L+ L L 
Sbjct: 225 VAAWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAV-AAWTALTLLDLY 283

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           +N L  +P D       L  L L  N + +LP+         L +L++    L   P  I
Sbjct: 284 DNQLTVLP-DAVAAWTDLTDLYLESNRLTALPD--AVGGWNALTDLFMEGNDLTALPGAI 340

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
            RL +LR+L +  N L   PE     T  TE
Sbjct: 341 GRLAKLRMLVVDGNPLP--PEVLAAETEGTE 369


>gi|291234857|ref|XP_002737364.1| PREDICTED: leucine rich repeat containing 7-like, partial
           [Saccoglossus kowalevskii]
          Length = 1578

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 191/433 (44%), Gaps = 64/433 (14%)

Query: 24  VPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           VP E+Y+ F+++           L++L L  NNI+ L   L +   L  L  S N+L  L
Sbjct: 307 VPEEIYE-FEKS-----------LEELYLDSNNIKDLPRPLFHCHNLRKLGASDNELCVL 354

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P AI  L  L+ LD+S N IM +PD I     L   + S N + +LP    + LNL+   
Sbjct: 355 PPAIASLVNLEELDISKNGIMDLPDNIKCCKTLNMVELSVNPIGKLPDGFTQLLNLTHLY 414

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--NLIASWTMLTELIASKNLLNGMPE 201
            ++  +  LP +     K+  L++  N L  L     ++ +   LTEL    N L+ +P 
Sbjct: 415 LNDTFLDYLPANFGRLVKLKILEIRENHLKSLPKYPEVVGTLVNLTELWVDSNTLSKIPS 474

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG+L RL   D  +N+I S+P  + G  SL + ++  N L  LP  +GKLSKL TL + 
Sbjct: 475 FIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPESIGKLSKLSTLKVD 534

Query: 262 SNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            NQL    Y +    + +  L L+ N L  LPP IG +  +R L +  N L  L S L  
Sbjct: 535 DNQLSMLPYSI-GGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSEL-- 591

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                   ++R                               LSL G  L  +P E+   
Sbjct: 592 ----GSCSHIRL------------------------------LSLRGNKLEVLPDELGRI 617

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK-------DWPDAILTSLSSLSCL 432
             +T ++LS N ++ LP       +LQ L LS N+ K       DW +     +  L+C 
Sbjct: 618 SRLTVVNLSNNRLKYLPFNFCKLKNLQALWLSDNQSKPLIPLQTDWDEYYQNRI--LTCF 675

Query: 433 KLDNNPLRQVPSD 445
                P  ++P D
Sbjct: 676 MFPQQP--RLPDD 686



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 182/423 (43%), Gaps = 87/423 (20%)

Query: 141 DFKASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           DFK  N  +  +PE++ +  K + +L ++ N +  L   L      L +L AS N L  +
Sbjct: 298 DFKHCN--LLFVPEEIYEFEKSLEELYLDSNNIKDLPRPLFHCHN-LRKLGASDNELCVL 354

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  I SL  L  LD+ +N I+ +P +I  C +L    +  N +  LP    +L       
Sbjct: 355 PPAIASLVNLEELDISKNGIMDLPDNIKCCKTLNMVELSVNPIGKLPDGFTQL------- 407

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                          L L+ L L++  L  LP   G++  L+ L +  N L++L      
Sbjct: 408 ---------------LNLTHLYLNDTFLDYLPANFGRLVKLKILEIRENHLKSL------ 446

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                       + PE               + T +++T  EL ++   LS IPS I   
Sbjct: 447 -----------PKYPE--------------VVGTLVNLT--ELWVDSNTLSKIPSFIGNL 479

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +   D S+N I+ LPPE+    SL  + LS N +K  P++I   LS LS LK+D+N L
Sbjct: 480 KRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPESI-GKLSKLSTLKVDDNQL 538

Query: 440 RQVPSDGFKDIPMLQILDLSYNIASLPENPP------------------------FSSLP 475
             +P   +    M+ + +L  N+  L E PP                          S  
Sbjct: 539 SMLP---YSIGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSELGSCS 595

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           H++ L LR  +L   P ++ R+ +L +++LS N L+ +P  F  L +L  L LSDN    
Sbjct: 596 HIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLKYLPFNFCKLKNLQALWLSDNQSKP 655

Query: 536 LPP 538
           L P
Sbjct: 656 LIP 658



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 440 RQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
           R  PS     +  +++LD  + N+  +PE   +     L+ELYL    +++ P  +    
Sbjct: 281 RGCPSCFTSQVDEIKVLDFKHCNLLFVPEEI-YEFEKSLEELYLDSNNIKDLPRPLFHCH 339

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            LR L  S N L  +P    +L +L ELD+S N I  LP
Sbjct: 340 NLRKLGASDNELCVLPPAIASLVNLEELDISKNGIMDLP 378


>gi|196010173|ref|XP_002114951.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
 gi|190582334|gb|EDV22407.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
          Length = 426

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 41/334 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  R+  +LNLS+  +  +P             D   +  +L  L+L   +I +L +D+
Sbjct: 99  IRFCRSLNTLNLSSNPVERLP-------------DSITQLRNLTYLMLNDISIVELPDDI 145

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            +L  LTVL    N +  LP +I EL +L+ LD+  N I ++PD +GS   L +    +N
Sbjct: 146 GSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDTN 205

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----- 179
           Q+K+LP+S+GR  NL     S NC+ SLP+++ +   ++ L +  N L  L +++     
Sbjct: 206 QIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRNLTDLLLSSNLLQFLPSSIGKLRN 265

Query: 180 -----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                            I     LTEL+ ++N L  +P TIG L ++  L+  +N + SI
Sbjct: 266 LSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNADKNFLTSI 325

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           PS I  C +L    + +N L  LP+++GKL KL  LD+  N+L+   +   QL +  + L
Sbjct: 326 PSEIGNCTNLTVLSLRDNHLDHLPSQIGKLKKLTVLDVCGNRLESLPITVAQLNVKAIWL 385

Query: 283 SNN----SLSGLPPEI--GKMTTLRKLLLTGNPL 310
           S N    S+  LP  +  GK   L   LL   PL
Sbjct: 386 SENQSKPSVKLLPETLSDGKTEVLTCFLLPQQPL 419



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 211/454 (46%), Gaps = 55/454 (12%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYK--------NFDEAGEGD---KWWEAVDLQKLI 51
           RI    R   S++ S+ SL  VP+++Y+        N D     +   +++  + L+ L 
Sbjct: 4   RIFLCNRQIESVDKSHCSLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLS 63

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N I++L  ++ +L  L  LN+  N++ ++P AI     L +L++S N + ++PD I 
Sbjct: 64  LEDNEIKRLPMEISSLTKLVELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSIT 123

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L     +   + ELP  +G  +NL+  +A  N I  LP+ + + + + +LD+  N+
Sbjct: 124 QLRNLTYLMLNDISIVELPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANE 183

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  L ++L  S   L EL+   N +  +P +IG LS L  +DL +N + S+P  I    +
Sbjct: 184 IQELPDSL-GSLLHLKELLLDTNQIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRN 242

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L +  + +N L  LP+ +GKL  L  L L  N+++E       L  L+ L L+ N L  L
Sbjct: 243 LTDLLLSSNLLQFLPSSIGKLRNLSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQL 302

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IGK+  +  L                                N D    T+    I 
Sbjct: 303 PGTIGKLGKMNNL--------------------------------NADKNFLTSIPSEIG 330

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
             T L+V    LSL   +L  +PS+I +  ++T LD+  N ++ LP  ++   +++ + L
Sbjct: 331 NCTNLTV----LSLRDNHLDHLPSQIGKLKKLTVLDVCGNRLESLPITVAQ-LNVKAIWL 385

Query: 411 SRNKIKDWPDAILTSLSS-----LSCLKLDNNPL 439
           S N+ K     +  +LS      L+C  L   PL
Sbjct: 386 SENQSKPSVKLLPETLSDGKTEVLTCFLLPQQPL 419



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 177/452 (39%), Gaps = 111/452 (24%)

Query: 91  HMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
             ++S+D S  S+  +PD+I      L + +  +NQ++ELP    R L L +    +N I
Sbjct: 10  RQIESVDKSHCSLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEI 69

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
             L                                               P  I SL++L
Sbjct: 70  KRL-----------------------------------------------PMEISSLTKL 82

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + L+L QN I  IP +I  C SL    + +N +  LP  + +L  L  L L+   + E  
Sbjct: 83  VELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLTYLMLNDISIVELP 142

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            +   L  L+VL+   N +  LP  I ++T L +L L  N ++ L               
Sbjct: 143 DDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQEL--------------- 187

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                    DS  S      + + T               +  +P+ I     +  +DLS
Sbjct: 188 --------PDSLGSLLHLKELLLDTN-------------QIKKLPTSIGRLSNLESIDLS 226

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++ LP E+ +  +L  L+LS N ++  P +I   L +LS LKLD N + ++ +    
Sbjct: 227 ENCVESLPDEIGNVRNLTDLLLSSNLLQFLPSSI-GKLRNLSMLKLDINRIEEISAT--- 282

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
                                    L  L EL L    L++ P  I +L ++  L+  +N
Sbjct: 283 ----------------------IGGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNADKN 320

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L SIP    N T+LT L L DN++  LP ++
Sbjct: 321 FLTSIPSEIGNCTNLTVLSLRDNHLDHLPSQI 352



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 369 LSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           LSA+P +I+     + +L+L  N IQELPP+      L+ L L  N+IK  P  I +SL+
Sbjct: 22  LSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEI-SSLT 80

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
            L  L L  N +  +P +  +    L  L+LS N +  LP++   + L +L  L L  + 
Sbjct: 81  KLVELNLRQNEIYDIP-EAIRFCRSLNTLNLSSNPVERLPDS--ITQLRNLTYLMLNDIS 137

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           + E P DI  L  L +L+  +N ++ +P+    LT L  LDL  N I  LP  L S
Sbjct: 138 IVELPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGS 193



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 30/215 (13%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           RL    +EL+L+   +  +P + +   ++  L L  N I+ LP E+SS   L  L L +N
Sbjct: 31  RLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEISSLTKLVELNLRQN 90

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPF 471
           +I D P+AI     SL+ L L +NP+ ++P      +++  L + D+S  I  LP++   
Sbjct: 91  EIYDIPEAI-RFCRSLNTLNLSSNPVERLPDSITQLRNLTYLMLNDIS--IVELPDD--I 145

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN------------ 519
            SL +L  L  R   ++  P  I  L  L  LDL  N +Q +P+   +            
Sbjct: 146 GSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDTN 205

Query: 520 -----------LTSLTELDLSDNNISALPPELVSV 543
                      L++L  +DLS+N + +LP E+ +V
Sbjct: 206 QIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNV 240



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP-PFSSLPHL 477
           PD I      L  L LD N ++++P   F+   +L++ +LS     +   P   SSL  L
Sbjct: 26  PDQIYRLHRCLEELNLDANQIQELPPQFFR---LLKLRNLSLEDNEIKRLPMEISSLTKL 82

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL LR+ ++ + P  I   + L  L+LS N ++ +P+    L +LT L L+D +I  LP
Sbjct: 83  VELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLTYLMLNDISIVELP 142

Query: 538 PELVSV 543
            ++ S+
Sbjct: 143 DDIGSL 148


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 44/370 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P+++ +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPNKVEQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +  LDL  N +  LP E+     LQTL L  N++   P+ I   L +L  L L NNPL 
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI-KQLKNLKKLYLHNNPL- 406

Query: 441 QVPSDGFKDI 450
             PS+  + I
Sbjct: 407 --PSEKIERI 414



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           ++ E L +   +  L++ G+KLT L    I     L  L    N L  +P+ IG L  L 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGE-IGKLQNLQLLNLDDNQLIALPKEIGKLQNLQ 98

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L L +N+++++P  I    +L +  +  N L+A+P E+G+L  L  L+L  NQL     
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL RL  L L +N  + +  EIG++  L  L L  N L  L         P  +  L
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVL---------PKEIGQL 209

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R+                            + L L+   L+ +P EI +   +  L L  
Sbjct: 210 RN---------------------------LESLGLDHNQLNVLPKEIGQLQNLQILHLRN 242

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L+L++NK+   P+ I   L +L  LKL  N L  +P +    
Sbjct: 243 NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEI-GQLQNLQKLKLYENQLTTLPKE-IGQ 300

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +LQ L  LDL  N
Sbjct: 301 LQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHN 358

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L ++P+    L  L  L+L  N ++ LP E+
Sbjct: 359 QLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 24/309 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L + +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPQTITQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL +  I     L +L  ++
Sbjct: 195 GMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDE-IGDLEKLDDLTVAQ 253

Query: 194 NLLNGMPETIGS-------LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           N L  +P +IG+       L +L  L   +N I  +  +I  C +L E Y+  N L+ +P
Sbjct: 254 NCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIP 313

Query: 247 AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           + LG L  L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L 
Sbjct: 314 SSLGNLKSLRTLNLDKNQLKELPPTIGGCT-SLSVLSLRDNLIEQLPLEIGRLENLRVLD 372

Query: 305 LTGNPLRTL 313
           +  N L  L
Sbjct: 373 VCNNRLNYL 381



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 36/404 (8%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           +L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N+
Sbjct: 24  NLQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENE 71

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  ++
Sbjct: 72  VIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSM 131

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +    ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +
Sbjct: 132 TSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPS-ISELNQLRRLDLGHNELDDL 190

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  IG L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L 
Sbjct: 191 PNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLT 250

Query: 260 LHSNQLK--------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +  N L+           V     +LS+L    N+++ L P IG    L ++ LT N L 
Sbjct: 251 VAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLT 310

Query: 312 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            + SSL N      LK LR+  L +N+  E   T    I   T LSV    LSL    + 
Sbjct: 311 EIPSSLGN------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIE 356

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
            +P EI     +  LD+  N +  LP  ++    L+ L LS N+
Sbjct: 357 QLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 400



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 170/387 (43%), Gaps = 45/387 (11%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSIS-----ELNQLRRLDLGHNELD 188

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +        I M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP E+
Sbjct: 189 DLPNE----IGMLENL----EELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEI 240

Query: 400 SSCASLQTLILSRNKIKDWP------DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
                L  L +++N ++  P      D +   L  LS LK D N + Q+           
Sbjct: 241 GDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQL----------- 289

Query: 454 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
                          P   S   L E+YL    L E P+ +  L+ LR L+L +N L+ +
Sbjct: 290 --------------TPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKEL 335

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P      TSL+ L L DN I  LP E+
Sbjct: 336 PPTIGGCTSLSVLSLRDNLIEQLPLEI 362



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K LSL    +  +PS+I     + +L+L  N + +LP E+ +C  L+ L LS N I   P
Sbjct: 63  KILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLP 122

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I T L+S++ L L++  L Q+P D                            L +L+ 
Sbjct: 123 QTI-TQLTSMTSLGLNDISLTQMPHD-------------------------IGHLRNLRS 156

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L +R   LR  P  I  L QLR LDL  N L  +P     L +L EL +  N++ ALP  
Sbjct: 157 LEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPES 216

Query: 540 LV 541
           ++
Sbjct: 217 II 218


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 190/419 (45%), Gaps = 51/419 (12%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA-------HNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           VY N  EA +        D+Q L L        ++ +  L +++  L  L  L++S N+L
Sbjct: 93  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ L+++ N +  +P+EIG    L +   + NQL  LP  + +  NL 
Sbjct: 148 MTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQ 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN +T+LP+++    K+  L +E N+LT L    I     L  L  S N L  +P
Sbjct: 208 WLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGKLQNLQWLGLSNNQLTTLP 266

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L L  N++ ++P  I    +L E  +  N L+ LP E+ KL KL  L  
Sbjct: 267 KEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYS 326

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQ      E   L+ L  L+L +N L+ LP EIG +  L+ L L+ N L TL      
Sbjct: 327 SGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKE--- 383

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                        I     L +    L L    L+ +P EI + 
Sbjct: 384 -----------------------------IGKLQNLQL----LYLSDNQLTTLPKEIGKL 410

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             + +L LS N +  LP E+ +  SL+ L LS N +  +P+ I   L  L  L+L+N P
Sbjct: 411 QNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEI-GKLQHLKWLRLENIP 468



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 184/398 (46%), Gaps = 43/398 (10%)

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           K SN+ + +LP+++     +  LD+  N+L  L    I     L +L  ++N L  +PE 
Sbjct: 118 KNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKE-IGKLQNLQKLNLTRNRLANLPEE 176

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L  N++ ++P  I    +L    + NN L+ LP E+GKL KL  L L +
Sbjct: 177 IGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLEN 236

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  +L+ L  L LSNN L+ LP EIGK+  L++L L  N L TL        
Sbjct: 237 NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTL-------- 288

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++      D    TT  + I    +L    K+L   G   + +P EIW    
Sbjct: 289 -PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKL----KKLYSSGNQFTTVPEEIWNLQN 343

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L+L  N +  LP E+ +  +LQ L LS N++   P  I   L +L  L L +N L  
Sbjct: 344 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEI-GKLQNLQLLYLSDNQLTT 402

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           +P    K+I  LQ                     +LQELYL   QL   P +I  LQ L 
Sbjct: 403 LP----KEIGKLQ---------------------NLQELYLSDNQLATLPKEIENLQSLE 437

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            L LS N L S PE    L  L  L L   NI  L P+
Sbjct: 438 YLYLSDNPLTSFPEEIGKLQHLKWLRLE--NIPTLLPQ 473



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+ K               +LQKL L  N +  L E++  L  L  L
Sbjct: 140 LDLSSNQLMTLPKEIGK-------------LQNLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ LP  I +L  L+ L ++ N +  +P EIG    L      +NQL  LP  +
Sbjct: 187 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 246

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     SNN +T+LP+++     + +L +E N+LT L    I     L EL    
Sbjct: 247 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKE-IGKLQNLQELRLDY 305

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE I  L +L +L    N+  ++P  I    +L    + +N L++LP E+G L 
Sbjct: 306 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 365

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  +L+ L +L LS+N L+ LP EIGK+  L++L L+ N L T
Sbjct: 366 NLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLAT 425

Query: 313 LRSSLVN 319
           L   + N
Sbjct: 426 LPKEIEN 432



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 16/310 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E    D     +        +LQ L L +N +  L +
Sbjct: 162 KLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 221

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L++ +N+L+ LP  IG+L  L+ L +S N +  +P EIG    L +    
Sbjct: 222 EIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLE 281

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL + +   N +T+LPE++    K+ KL   GN+ T +   +   
Sbjct: 282 NNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI--- 338

Query: 183 WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           W +  L  L    N L  +P+ IG+L  L  L L  N++ ++P  I    +L   Y+ +N
Sbjct: 339 WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 398

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+GKL  L  L L  NQL     E   L+ L  L LS+N L+  P EIGK+  
Sbjct: 399 QLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQH 458

Query: 300 LRKLLLTGNP 309
           L+ L L   P
Sbjct: 459 LKWLRLENIP 468



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 164/344 (47%), Gaps = 42/344 (12%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L  LDL  N+++++P  I    +L +  +  N L+ LP E+GKL  L  L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L  NQL     E  +L+ L  L L+NN L+ LP EIGK+  L  L L  N L TL    
Sbjct: 187 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL---- 242

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                P  +  L++                            + L L    L+ +P EI 
Sbjct: 243 -----PKEIGKLQNL---------------------------QWLGLSNNQLTTLPKEIG 270

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   + +L L  N +  LP E+    +LQ L L  N++   P+ I   L  L  L    N
Sbjct: 271 KLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEI-EKLQKLKKLYSSGN 329

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
               VP + + ++  LQ L+L  N + SLP+     +L +LQ LYL   QL   P +I +
Sbjct: 330 QFTTVPEEIW-NLQNLQALNLYSNQLTSLPKE--IGNLQNLQLLYLSDNQLATLPKEIGK 386

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LQ L++L LS N L ++P+    L +L EL LSDN ++ LP E+
Sbjct: 387 LQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEI 430


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 130/243 (53%), Gaps = 25/243 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT          T+L E   
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLT----------TLLQE--- 158

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                      IG L  L +L+L +NR+ ++P+ I    +L E Y+ NN L+ LP E+G+
Sbjct: 159 -----------IGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L +L   NN L+ LP EIG++  L++L L  N L
Sbjct: 208 LKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQL 267

Query: 311 RTL 313
            TL
Sbjct: 268 TTL 270



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 14/270 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L  L  L L+ N++ ++P  I    +L  F   NN L+ 
Sbjct: 233 NLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTM 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           LP E+G+L  L  L L++NQL     E  Q
Sbjct: 293 LPQEIGQLQNLQWLKLNNNQLSSQEEERIQ 322



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 2/267 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L  L  L L+ NQL     E  QL+ L      
Sbjct: 227 EIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISF 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           NN L+ LP EIG++  L+ L L  N L
Sbjct: 287 NNQLTMLPQEIGQLQNLQWLKLNNNQL 313



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 138/306 (45%), Gaps = 44/306 (14%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQS 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L++                   +    SV ++        L+ +P
Sbjct: 225 ---------PKEIGQLQN-------------------LKLLYSVNNE--------LTTLP 248

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   + +L L+ N +  LP E+    +LQT I   N++   P  I   L +L  LK
Sbjct: 249 KEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI-GQLQNLQWLK 307

Query: 434 LDNNPL 439
           L+NN L
Sbjct: 308 LNNNQL 313



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 146/307 (47%), Gaps = 48/307 (15%)

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+ +L  L +LDL +NQ K    E  QL+ L  L+L NN L  LP EIG++  
Sbjct: 59  KLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQN 118

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L+L+ N L T          P  +  L++                            
Sbjct: 119 LQTLILSVNRLTTF---------PQEIGQLKNL--------------------------- 142

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L+L+   L+ +  EI +   + KL+L +N ++ LP E+    +LQ L LS N++   P
Sbjct: 143 QKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 202

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI----ASLPENPPFSSLP 475
           + I   L +L  L L +N L  +P    K+I  LQ L L Y++     +LP+      L 
Sbjct: 203 EEI-GQLKNLQALILGDNQLTILP----KEIGQLQNLKLLYSVNNELTTLPK--EIGQLE 255

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +LQELYL   QL   P +I +L+ L+      N L  +P+    L +L  L L++N +S+
Sbjct: 256 NLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSS 315

Query: 536 LPPELVS 542
              E + 
Sbjct: 316 QEEERIQ 322



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L  LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 528 LSDNNISALPPEL 540
           L DN ++ LP E+
Sbjct: 216 LGDNQLTILPKEI 228


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 207/459 (45%), Gaps = 62/459 (13%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++ +I  L  ++  L  L  L+     L+ LP  +G L  L  L ++ N +  +P 
Sbjct: 86  KLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPA 145

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG+ T L +   + N+L  L + +G    L   + + N + +LP ++   +++ KL+V 
Sbjct: 146 EIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVG 205

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT L    I+  T L EL    N    +P  IG+LS L  L +  N++ ++PS I  
Sbjct: 206 SNQLTTLPAE-ISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGN 264

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L E Y+  N L ALPAE+G L  L  L L SNQL E                     
Sbjct: 265 LTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSE--------------------- 303

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP EIG +  LR L L  N L TL +++        LK L          E    K DL
Sbjct: 304 -LPTEIGLVGDLRILCLEENLLTTLPNTI------GQLKCLE---------ELRIWKNDL 347

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +                     A+P EI     +  LD+S N +   P +++    LQ L
Sbjct: 348 V---------------------ALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKL 386

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            ++ N + D PD I   L  L  L L  N L  +P+ G   +  LQ LDL YN   +  +
Sbjct: 387 NVAENGLTDLPDEI-NQLVKLEELNLGGNNLTSLPA-GLAKLQKLQNLDLRYNELEVLPS 444

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
             F +L +LQEL L    L   P +I +L++L+ L L  
Sbjct: 445 EVF-ALSNLQELNLMGNYLTTIPVEITKLKKLQYLYLQH 482



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 47/412 (11%)

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             N +    S   I+ LP ++A  + + KLD     LT+L    + + T L +L  ++N 
Sbjct: 81  VFNQAKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPE-VGALTNLYKLRLNRNE 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+L++L  L +  NR+ ++ + I     L +  +  N L ALPAE+GKL++L
Sbjct: 140 LTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++ SNQL     E   L  L  L + NN  + LP EIG ++ L+ L ++ N L TL 
Sbjct: 200 KKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S + N                                      T +EL +E   L A+P+
Sbjct: 260 SEIGN------------------------------------LTTLQELYIEENQLIALPA 283

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI     +  L L  N + ELP E+     L+ L L  N +   P+ I   L  L  L++
Sbjct: 284 EIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNTI-GQLKCLEELRI 342

Query: 435 DNNPLRQVP--SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
             N L  +P   D  K+   L  LD+S+N +++ P     + L  LQ+L +    L + P
Sbjct: 343 WKNDLVALPLEIDSLKN---LHTLDISFNKLSTFP--LQITQLEGLQKLNVAENGLTDLP 397

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +I +L +L  L+L  N+L S+P G   L  L  LDL  N +  LP E+ ++
Sbjct: 398 DEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFAL 449



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 180/396 (45%), Gaps = 61/396 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L KL L  N +  L  ++ NL  L  L ++ N+LS L A IG L  L+ L+++ N ++ 
Sbjct: 129 NLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVA 188

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L K +  SNQL  LP+ +    +L +    NN  T+LP ++   S +  L
Sbjct: 189 LPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFL 248

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-------------------- 205
            V  N+L  L +  I + T L EL   +N L  +P  IG+                    
Sbjct: 249 YVSDNQLATLPSE-IGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTE 307

Query: 206 ---LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              +  L  L L +N + ++P++I     L E  +  N L ALP E+  L  L TLD+  
Sbjct: 308 IGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISF 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L  + ++  QL  L  L+++ N L+ LP EI ++  L +L L GN L +L + L    
Sbjct: 368 NKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGL---- 423

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
             A L+ L++                              L L    L  +PSE++    
Sbjct: 424 --AKLQKLQN------------------------------LDLRYNELEVLPSEVFALSN 451

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           + +L+L  N +  +P E++    LQ L L    I +
Sbjct: 452 LQELNLMGNYLTTIPVEITKLKKLQYLYLQHGLISE 487



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 47/274 (17%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L + +N    L  ++  L  L  L VS N+L+ LP+ IG L  L+ L +  N ++ +
Sbjct: 222 LEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIAL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-------------------------RCL---- 137
           P EIG+  +L      SNQL ELP+ +G                         +CL    
Sbjct: 282 PAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELR 341

Query: 138 -----------------NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
                            NL     S N +++ P  +     + KL+V  N LT L +  I
Sbjct: 342 IWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDE-I 400

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL    N L  +P  +  L +L  LDL  N +  +PS +    +L E  +  N
Sbjct: 401 NQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGN 460

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            L+ +P E+ KL KL  L L    + E  +E  +
Sbjct: 461 YLTTIPVEITKLKKLQYLYLQHGLISEQELERVK 494



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 13/111 (11%)

Query: 441 QVPSDGFKDIPMLQI----------LDLSY-NIASLPENPPFSSLPHLQELYLRRMQLRE 489
           + P+   KD+  L++          L+LSY +I+ LP     + L HLQ+L    + L  
Sbjct: 62  EAPNTDVKDLESLEVEHIMVFNQAKLNLSYKHISVLP--AEIAGLTHLQKLDCMAIGLTI 119

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P ++  L  L  L L++N L  +P    NLT L EL ++DN +SAL  E+
Sbjct: 120 LPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEI 170


>gi|358336649|dbj|GAA32880.2| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 586

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 190/420 (45%), Gaps = 43/420 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA--AIGELHMLKSLDVS 99
           +  V+L  L++  N I  + +D+  L  L VL+V  NK+  LP+   I +L  L +LDVS
Sbjct: 192 YSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLSVRENKIRSLPSNPGIEKLTQLMTLDVS 251

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+EI     L   +   N+L+ LP S+G    L       N +  LP  +A C
Sbjct: 252 HNHLEQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLERVGLRYNHLECLPASMAQC 311

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNR 218
             + +L++EGN +  L   L+A    L+ L+ S+N     P       + +  L++  N+
Sbjct: 312 DNLLELNIEGNNIVQLPEGLLAHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQ 371

Query: 219 ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           I  IP  I S    LA+  M +N L++LP ++     L  L+L +NQL +   +   L  
Sbjct: 372 ISKIPFGIFSRASHLAKLNMKDNQLASLPPDIKSWEVLVELNLGTNQLTKLPDDVEHLVN 431

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL LSNN L  +PP I ++  L+ L L  N L  L         P  +  L       
Sbjct: 432 LEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECL---------PLEIGQL------- 475

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                 +  + LI  + RL              + +P  I     +  L +  N +Q LP
Sbjct: 476 ------SELQRLIVQSNRL--------------TELPRTIGMLQSLIHLAVGENDLQRLP 515

Query: 397 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           PE+     L+TL L+ N  + D P   L    SL  + ++N PL Q+P +     P L I
Sbjct: 516 PEIGDLHKLETLYLNDNPNLNDLPTE-LGMCFSLQIMSIENCPLSQIPVEVTAGGPSLVI 574



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 219/479 (45%), Gaps = 50/479 (10%)

Query: 71  TVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           T L++S  +L  LP +I +L   L+ L +  N ++ +P EIG    L       N L  L
Sbjct: 105 TRLDLSKGQLHSLPPSIRDLAGHLRELYLYCNKLVSLPPEIGLLPHLEILMLQENSLSRL 164

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P SL  C NL      +N +  +P  +     ++ L +  N++ V+ ++ I+  T L  L
Sbjct: 165 PDSLAGCTNLRMLDIRHNKLCEIPPVIYSLVNLTHLLMRFNRIRVVDDD-ISKLTKLQVL 223

Query: 190 IASKNLLNGMPETIG--SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
              +N +  +P   G   L++L+ LD+  N +  +P  I  C  L    + +N L +LP 
Sbjct: 224 SVRENKIRSLPSNPGIEKLTQLMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPE 283

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR---LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            +G+L  L  + L  N L+  C+ A   +   L  L++  N++  LP   G +  LRKL 
Sbjct: 284 SIGELRLLERVGLRYNHLE--CLPASMAQCDNLLELNIEGNNIVQLPE--GLLAHLRKL- 338

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
                     SSLV         Y R+  P       S                 + L++
Sbjct: 339 ----------SSLV-----VSRNYFRAFPPGGPQQFTSI----------------QSLNM 367

Query: 365 EGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           +   +S IP  I+  A  + KL++  N +  LPP++ S   L  L L  N++   PD + 
Sbjct: 368 DHNQISKIPFGIFSRASHLAKLNMKDNQLASLPPDIKSWEVLVELNLGTNQLTKLPDDV- 426

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L +L  L L NN L+++P    +++  LQ+LDL  N +  LP       L  LQ L +
Sbjct: 427 EHLVNLEVLILSNNQLKRIPPT-IQELKKLQLLDLEENHLECLPLE--IGQLSELQRLIV 483

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           +  +L E P  I  LQ L  L + +N LQ +P    +L  L  L L+DN N++ LP EL
Sbjct: 484 QSNRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDNPNLNDLPTEL 542



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 211/463 (45%), Gaps = 73/463 (15%)

Query: 86  AIGELHMLKS-----LDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNL 139
           A+ E+H  +      LD+S   +  +P  I   A  L +     N+L  LP  +G   +L
Sbjct: 92  ALKEIHRCREENTTRLDLSKGQLHSLPPSIRDLAGHLRELYLYCNKLVSLPPEIGLLPHL 151

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
                  N ++ LP+ LA C+ +  LD+  NKL  +   +I S   LT L+   N +  +
Sbjct: 152 EILMLQENSLSRLPDSLAGCTNLRMLDIRHNKLCEIPP-VIYSLVNLTHLLMRFNRIRVV 210

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
            + I  L++L  L + +N+I S+PS+                       + KL++L TLD
Sbjct: 211 DDDISKLTKLQVLSVRENKIRSLPSN---------------------PGIEKLTQLMTLD 249

Query: 260 LHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +  N L++    ++ CQ +L+ L+L +N L  LP  IG++  L ++ L  N L  L +S+
Sbjct: 250 VSHNHLEQVPEEIQHCQ-KLTTLNLQHNELRSLPESIGELRLLERVGLRYNHLECLPASM 308

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                                       ++L+           EL++EG N+  +P  + 
Sbjct: 309 AQC-------------------------DNLL-----------ELNIEGNNIVQLPEGLL 332

Query: 378 -EAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
               +++ L +SRN  +  PP       S+Q+L +  N+I   P  I +  S L+ L + 
Sbjct: 333 AHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQISKIPFGIFSRASHLAKLNMK 392

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           +N L  +P D  K   +L  L+L  N +  LP++     L +L+ L L   QL+  P  I
Sbjct: 393 DNQLASLPPD-IKSWEVLVELNLGTNQLTKLPDD--VEHLVNLEVLILSNNQLKRIPPTI 449

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L++L++LDL +N L+ +P     L+ L  L +  N ++ LP
Sbjct: 450 QELKKLQLLDLEENHLECLPLEIGQLSELQRLIVQSNRLTELP 492



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 13/167 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A     LN+ +  L  +P ++           K WE   L +L L  N + KL +D
Sbjct: 379 IFSRASHLAKLNMKDNQLASLPPDI-----------KSWEV--LVELNLGTNQLTKLPDD 425

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  L VL +S+N+L  +P  I EL  L+ LD+  N +  +P EIG  + L +    S
Sbjct: 426 VEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRLIVQS 485

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           N+L ELP ++G   +L       N +  LP ++ D  K+  L +  N
Sbjct: 486 NRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDN 532



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           HL+ELYL   +L   P +I  L  L IL L +NSL  +P+     T+L  LD+  N +  
Sbjct: 127 HLRELYLYCNKLVSLPPEIGLLPHLEILMLQENSLSRLPDSLAGCTNLRMLDIRHNKLCE 186

Query: 536 LPPELVSV 543
           +PP + S+
Sbjct: 187 IPPVIYSL 194


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 50  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 170 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 228

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 229 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 288

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 289 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 348

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 349 ELFLNNNQL 357



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 53  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 112

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 113 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 172

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 173 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 231

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 232 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 291

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 292 PKEIGQLKNLQVLDLGSNQLTTL 314



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 271

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 272 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 311 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 341



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 162 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 282 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 341 IGQLQNLQELFLNNNQLSS 359



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 87  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + +LP+      L +L+ L L   Q++  P  I +LQ+L+ L L  N L ++P+ 
Sbjct: 145 LPKNQLTTLPQE--IGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L  LDLS N ++ LP E+
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEI 226


>gi|299115332|emb|CBN74150.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 1385

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 215/509 (42%), Gaps = 87/509 (17%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L++N + ++  DL  +  L  +N  HN++  +P  +  L  LK L +  N I   
Sbjct: 346 LQRLDLSNNRLYRISPDLAGMESLVDVNFRHNRIQAIPDELEALTKLKHLQLGHNLISGF 405

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG---------------RCLN-LSDFKASNNCIT 150
              I   ++L   D   N+LKE+P  +G               R L  L     S N + 
Sbjct: 406 RGNIYLISSLETLDLGHNRLKEVPLQVGDLQLLKRTREWEIGLRLLRELVTLDVSYNRLK 465

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           + P  + +C  +  L ++ NKL  +   ++   T LT L  S N L G+P TI SLS L 
Sbjct: 466 TWPPQVEECRNLRDLRLDHNKLQEVP-AIVGDNTALTNLNLSGNSLKGLPHTINSLSALA 524

Query: 211 RLDLHQNR-----ILSIPSSISG--CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           RLDL  N+     IL +     G    SL    +  N L+  P  +     L  LD+ +N
Sbjct: 525 RLDLSDNKLKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNN 584

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            +K + ++   LR +  L L    L   P  IG +  L  L  + N + TL  S+     
Sbjct: 585 PIKNWSLDVSNLRKMKHLRLRGVGLDRCPEGIGHLNKLESLDFSENHIDTLDQSMA---- 640

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            AL K                                K+L L G N+  + S +     +
Sbjct: 641 -ALFKL-------------------------------KKLGLRGNNIRDLGSCVGSMISL 668

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           T LD   N+++ + PELS C +L+TL +S   I   PD  L+ L+ L  L+  +N LR +
Sbjct: 669 TSLDAGGNNLELISPELSRCTALETLDVSGGTINQLPDG-LSMLTRLRVLRAQDNGLRAI 727

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
           P                         P F +L  L+EL L   QL   P  ++ L ++R 
Sbjct: 728 P-------------------------PDFQTLTALEELRLGGNQLSSLPASLITLTKMRY 762

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
            +LS+NS++S P   +    LT L LS N
Sbjct: 763 AELSRNSMESPPPVTRQWPLLTHLVLSRN 791



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 22/174 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L  + N+I+ L + +  L  L  L +  N + +L + +G +  L SLD   N++  I
Sbjct: 622 LESLDFSENHIDTLDQSMAALFKLKKLGLRGNNIRDLGSCVGSMISLTSLDAGGNNLELI 681

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             E+   TAL   D S   + +LP  L     L   +A +N + ++P D    + + +L 
Sbjct: 682 SPELSRCTALETLDVSGGTINQLPDGLSMLTRLRVLRAQDNGLRAIPPDFQTLTALEELR 741

Query: 167 VEGNKLTVLSNNLIA----------------------SWTMLTELIASKNLLNG 198
           + GN+L+ L  +LI                        W +LT L+ S+N L G
Sbjct: 742 LGGNQLSSLPASLITLTKMRYAELSRNSMESPPPVTRQWPLLTHLVLSRNPLRG 795


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 66/389 (16%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + ++ +++     + KL ++ N+LT LS                        + IG L 
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTALS------------------------KEIGKLQ 185

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++ + P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL  
Sbjct: 186 NLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT 245

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L +L  L+L  N L+ +P EIG++  L+ L L+ N  +T+         P   
Sbjct: 246 IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEF 296

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L++                            K LSL+   L+A+P EI +   +  L+
Sbjct: 297 GQLKNL---------------------------KMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKI 415
           L  N +  +P E+    +LQTL L  N+ 
Sbjct: 330 LDANQLTTIPKEIGQLQNLQTLYLRNNQF 358



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 146/333 (43%), Gaps = 39/333 (11%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 122 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 157

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 158 IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 217

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 218 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 268

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L       IP E  +   +  L L  N +  LP E+    +
Sbjct: 269 IPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKN 324

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           L+ L L  N++   P  I   L +L  L L NN
Sbjct: 325 LKMLNLDANQLTTIPKEI-GQLQNLQTLYLRNN 356



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 10/290 (3%)

Query: 19  RSLRDVPN--EVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           + +R + N  E++ N+++     K  E +  L KL L++N +  L  ++  L  L  LN+
Sbjct: 87  KEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNL 146

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
            +N+L  +   I +L  L+ L +  N +  +  EIG    L     S+NQL   P  +G+
Sbjct: 147 WNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGK 206

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +   SNN +T+ P+++    K+  L +  N+LT + N  I     L EL    N 
Sbjct: 207 LQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNE-IGKLQKLQELNLDVNQ 265

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L L  N+  +IP       +L    +  N L+ALP E+GKL  L
Sbjct: 266 LTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNL 325

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             L+L +NQL     E  QL+ L  L L NN  S     I +   +RKLL
Sbjct: 326 KMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRKLL 370



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 148/352 (42%), Gaps = 84/352 (23%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N L+  P E
Sbjct: 52  LILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKE 111

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 112 IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+T+   +                            E L  +        ++L L+   
Sbjct: 150 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 173

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A+  EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 174 LTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 232

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 233 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 267

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 319



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  L   P E+ K               +LQ+L L++N +    +++  L  L  
Sbjct: 189 SLFLSNNQLTTFPKEIGK-------------LQNLQELYLSNNQLTTFPKEIGKLQKLQW 235

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P  IG+L  L+ L++  N +  IP EIG    L     S NQ K +P  
Sbjct: 236 LGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVE 295

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            G+  NL       N +T+LP+++     +  L+++ N+LT +
Sbjct: 296 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTI 338



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL     +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 216 SNNQLTTFPKEI 227



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L  N +  +  ++  L  L  
Sbjct: 212 ELYLSNNQLTTFPKEI-------GKLQK------LQWLGLGDNQLTTIPNEIGKLQKLQE 258

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 259 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 318

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N +T++P+++     +  L +  N+ ++
Sbjct: 319 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSI 360


>gi|344270739|ref|XP_003407201.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Loxodonta africana]
          Length = 865

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 242/533 (45%), Gaps = 59/533 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE     L NL  L +L
Sbjct: 223 LNVSHNQISHIPKEI----SQLG---------NIRQLFFNNNYIESFPPGLENLGNLEIL 269

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  +P  I  L  L+ L + +N +   P  +     L+  + + N ++ LP  +
Sbjct: 270 NLAKNKLKHIPETIYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIRSLPKEI 329

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    KM +L +  NKL V+S   I ++  L  L   K
Sbjct: 330 EELKNLESLSLDHNNLTFLAVEIFQLLKMKELHLANNKLEVISYK-IGNFKELRILTLDK 388

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  + E I     L  L L+ N ++ +P +I    +L   ++  N++  +  ++  L+
Sbjct: 389 NLLKEVSEKISHCIMLECLSLNDNELVELPKNIHKLKNLRTLHVNRNSILKITEDISHLN 448

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +L+   N + +  +E    R ++ ++LS N +   P  +  + +L  L+  GN +  
Sbjct: 449 NLCSLEFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFPVGLCALDSLYYLIFNGNYI-- 506

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                             S +P     + S +K+ L      L     +L L   +L ++
Sbjct: 507 ------------------SEIP----VDISFSKQLL-----HLEFNENKLHLFSEHLCSL 539

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
            +       +  L+L +N I ++PP +S+  SL  LIL  NK + +P   L +L +L  L
Sbjct: 540 IN-------LEYLNLGKNQISKIPPFISNMVSLHVLILCHNKFETFPTE-LCALENLQVL 591

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM---QLR 488
            L  N ++ +PSD   ++  +Q L+ S N     P       L  L+EL + ++   +L 
Sbjct: 592 DLSENQMQTIPSD-ICNLKGIQKLNFSSNQFVCFP--IELCHLQSLEELNISQINGRKLT 648

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             P ++  + QL+ LD+S N+++ IP        L  L+  +N IS LPP  +
Sbjct: 649 RLPEELFNMIQLKELDISNNAIREIPRNVGESRCLVSLNACNNQISCLPPSFL 701



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 229/534 (42%), Gaps = 81/534 (15%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           ++NL  + L++ PN++ K         K+ + + L K     N I+  + D  +L  L +
Sbjct: 153 TVNLEAKDLQEFPNDILK--------VKYVKYLYLDK-----NQIKTFQVDSSDLLGLEI 199

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  NK+S LP+ I  L  L+ L+VS N I  IP EI                    S 
Sbjct: 200 LSLKENKISSLPSEIPVLSNLRILNVSHNQISHIPKEI--------------------SQ 239

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG   N+     +NN I S P  L +   +  L++  NKL                    
Sbjct: 240 LG---NIRQLFFNNNYIESFPPGLENLGNLEILNLAKNKLK------------------- 277

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +PETI +L  L  L L  N++   P ++     L    +  N + +LP E+ +L
Sbjct: 278 -----HIPETIYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIRSLPKEIEEL 332

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L +L L  N L    VE  QL ++  L L+NN L  +  +IG    LR L L  N L+
Sbjct: 333 KNLESLSLDHNNLTFLAVEIFQLLKMKELHLANNKLEVISYKIGNFKELRILTLDKNLLK 392

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            +   + +      L      L +NE  E       L  + T        L +   ++  
Sbjct: 393 EVSEKISHCIMLECLS-----LNDNELVELPKNIHKLKNLRT--------LHVNRNSILK 439

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           I  +I     +  L+ S N I ++P E+ +C  +  + LS NKI  +P   L +L SL  
Sbjct: 440 ITEDISHLNNLCSLEFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFPVG-LCALDSLYY 498

Query: 432 LKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASLP-ENPPFSSLPHLQELYLRRMQLRE 489
           L  + N + ++P D  F      Q+L L +N   L   +    SL +L+ L L + Q+ +
Sbjct: 499 LIFNGNYISEIPVDISFSK----QLLHLEFNENKLHLFSEHLCSLINLEYLNLGKNQISK 554

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            P  I  +  L +L L  N  ++ P     L +L  LDLS+N +  +P ++ ++
Sbjct: 555 IPPFISNMVSLHVLILCHNKFETFPTELCALENLQVLDLSENQMQTIPSDICNL 608



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I K+   + N+  L VL + HNK    P  +  L  L+ LD+S N + 
Sbjct: 540 INLEYLNLGKNQISKIPPFISNMVSLHVLILCHNKFETFPTELCALENLQVLDLSENQMQ 599

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP +I +   + K + SSNQ    P  L    +L +   S      +T LPE+L +  +
Sbjct: 600 TIPSDICNLKGIQKLNFSSNQFVCFPIELCHLQSLEELNISQINGRKLTRLPEELFNMIQ 659

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +LD+  N +  +  N +     L  L A  N ++ +P +   L+ L +L+L  N + +
Sbjct: 660 LKELDISNNAIREIPRN-VGESRCLVSLNACNNQISCLPPSFLFLNDLQQLNLSGNNLTA 718

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 719 LPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 755


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 14/317 (4%)

Query: 22  RDV-PNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           RD   N+VY++F+EA +      A+D++ L L  N +  L +++  L  L  LN+ +N+ 
Sbjct: 19  RDAEKNKVYRDFNEALKN-----AMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQF 73

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           + LP  IG L  L+SL +  N +  +P EIG    L   D   N+L+ LP  +G+  NL 
Sbjct: 74  TALPQEIGTLQNLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLK 133

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                +N +T+LP+++     +  L +  ++LT      I +   L EL  S   L   P
Sbjct: 134 RLYLVDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQE-IGTLQNLKELSLSSTQLTTFP 192

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L +L  L L   +++++   I    +L    + +N  +  P E+GKL KL  L L
Sbjct: 193 KEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFL 252

Query: 261 HSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+L     E   L+  V L+L+NN L  LP  IG++ +L+ L L+GNP  T    +V 
Sbjct: 253 EHNRLTTLSEEIVGLQKIVKLNLANNQLRTLPQGIGQLQSLKDLNLSGNPFTTFPQEIVG 312

Query: 320 GPTPALLKYLRSRLPEN 336
                 LK+L+  + EN
Sbjct: 313 ------LKHLKRLVLEN 323



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 151/336 (44%), Gaps = 34/336 (10%)

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           K D E NK+    N  + +   +  L    N L  +P+ IG L +L  L+L  N+  ++P
Sbjct: 18  KRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             I    +L    + +N L +LP E+G+L  L  LDL  N+L+    E  QL+ L  L L
Sbjct: 78  QEIGTLQNLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYL 137

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            +N L+ LP EIG +  L+ L L+ + L T    +        L+ L+         E S
Sbjct: 138 VDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQEI------GTLQNLK---------ELS 182

Query: 343 TTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            +   L T    +    K  EL L    L  +  EI +   +  LDLS N     P E+ 
Sbjct: 183 LSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIG 242

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
               L+ L L  N++    + I+  L  +  L L NN LR +P  G   +  L+ L+LS 
Sbjct: 243 KLRKLEYLFLEHNRLTTLSEEIV-GLQKIVKLNLANNQLRTLP-QGIGQLQSLKDLNLSG 300

Query: 461 NIASLPENPPFSSLPHLQEL----YLRRMQLREAPT 492
           N        PF++ P  QE+    +L+R+ L   PT
Sbjct: 301 N--------PFTTFP--QEIVGLKHLKRLVLENIPT 326



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 142/310 (45%), Gaps = 42/310 (13%)

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
           Y+ +N L+ LP E+G+L KL  L+L +NQ      E   L+ L  L L +N L  LP EI
Sbjct: 44  YLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLESLPKEI 103

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++  L+ L L  N L +L         P  +  L++                       
Sbjct: 104 GRLQNLQNLDLIYNRLESL---------PKEIGQLQN----------------------- 131

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                K L L   +L+ +P EI     +  L LS + +     E+ +  +L+ L LS  +
Sbjct: 132 ----LKRLYLVDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQ 187

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           +  +P  I   L  L  L L +  L  + S     +  L++LDLS N   + P+      
Sbjct: 188 LTTFPKEI-GQLQKLEELYLPSTQLVTL-SKEIGQLQNLKLLDLSDNQFTTFPKE--IGK 243

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L+ L+L   +L     +I+ LQ++  L+L+ N L+++P+G   L SL +L+LS N  
Sbjct: 244 LRKLEYLFLEHNRLTTLSEEIVGLQKIVKLNLANNQLRTLPQGIGQLQSLKDLNLSGNPF 303

Query: 534 SALPPELVSV 543
           +  P E+V +
Sbjct: 304 TTFPQEIVGL 313



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 6/131 (4%)

Query: 412 RNKI-KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           +NK+ +D+ +A+  ++  +  L L++N L  +P +    +  L+ L+L  N   +LP+  
Sbjct: 23  KNKVYRDFNEALKNAMD-VRILYLESNQLTTLPQE-IGRLQKLEELNLRNNQFTALPQE- 79

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              +L +LQ L L   +L   P +I RLQ L+ LDL  N L+S+P+    L +L  L L 
Sbjct: 80  -IGTLQNLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLV 138

Query: 530 DNNISALPPEL 540
           DN+++ LP E+
Sbjct: 139 DNHLTTLPQEI 149


>gi|395818930|ref|XP_003782862.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Otolemur garnettii]
          Length = 901

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 243/560 (43%), Gaps = 75/560 (13%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE 89
           K FD    GD     + L+ L L  N +  L  ++  L  L +LNVSHN++  +P  I +
Sbjct: 184 KTFDGTDSGD----LLGLEILSLQENELLSLPSEIHLLHNLRILNVSHNQIPHIPVEISQ 239

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           L  ++ L    N I  +P ++ +   L   +   N+LK +P +L    NL+      N +
Sbjct: 240 LGNIRQLFFDNNYIENLPSDLANLRNLEILNLGKNKLKLIPDTLPSLKNLNVLNLEYNQL 299

Query: 150 TSLPEDLADCSKMSKLDVEG-----------------------NKLTVLSNNLIASWTML 186
           T  P+ L    K+  L++ G                       NKLT L+   I     +
Sbjct: 300 TIFPKALCFLPKLMSLNLTGNLIKSLPKEIKELKNLEKLLLDHNKLTFLAVQ-IFQLLKI 358

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL  + N L  +   I +   L  L L +N + +IP  IS C  L    + +N L+ LP
Sbjct: 359 KELQLADNKLEVISHKIENFRELRILMLDKNLLKNIPEKISYCVMLECLSLSDNKLTELP 418

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             + KL  L  L ++ N +     +   L  +S L+ S N ++ +P EI     + K+ L
Sbjct: 419 KNIHKLKNLRKLHVNRNHMVGITEDILHLHNISSLEFSGNIITDIPIEIKNCQKITKIEL 478

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +R     L    +   L +  + + E               +   +S   + L LE
Sbjct: 479 NYNEIRYFPVGLCALDSLYYLSFNGNYISE---------------IPADISFNKQLLHLE 523

Query: 366 -GMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
              N   I SE +     +  LDL +N I ++PP +S+  SL  LIL  NK + +P  + 
Sbjct: 524 FNENKFLIFSEYFCSLINLRYLDLGKNQISKIPPSISNMISLHVLILCYNKFEIFPRELC 583

Query: 424 TSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLSY- 460
           T L +L  L L  N LR++PS+                F   P+       L+ L+LS  
Sbjct: 584 T-LENLRVLDLSENHLRKIPSEICNLKGIQKLNFASNQFTYFPIELCQLQSLEELNLSQI 642

Query: 461 ---NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
               + SLPE    S++  L+EL +   ++RE P +I  L+ L  L    N +  +P  F
Sbjct: 643 NGRKLTSLPEE--LSNMTQLKELDVSNNEIREIPRNIGELRNLVSLYAHNNHISYLPPSF 700

Query: 518 KNLTSLTELDLSDNNISALP 537
            +L  L +L+LS NN++ALP
Sbjct: 701 LSLNHLQQLNLSGNNLTALP 720



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 211/477 (44%), Gaps = 68/477 (14%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++  N+L  LP+ I  LH L+ L+VS N I  IP EI     + +    +N ++ L
Sbjct: 197 LEILSLQENELLSLPSEIHLLHNLRILNVSHNQIPHIPVEISQLGNIRQLFFDNNYIENL 256

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS L    NL       N +  +P+ L     ++ L++E N+LT+               
Sbjct: 257 PSDLANLRNLEILNLGKNKLKLIPDTLPSLKNLNVLNLEYNQLTIF-------------- 302

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+ +  L +L+ L+L  N I S+P  I    +L +  + +N L+ L  ++
Sbjct: 303 ----------PKALCFLPKLMSLNLTGNLIKSLPKEIKELKNLEKLLLDHNKLTFLAVQI 352

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L K+  L L  N+L+    +    R L +L L  N L  +P +I     L  L L+ N
Sbjct: 353 FQLLKIKELQLADNKLEVISHKIENFRELRILMLDKNLLKNIPEKISYCVMLECLSLSDN 412

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L  ++        LK LR                              +L +   +
Sbjct: 413 KLTELPKNIHK------LKNLR------------------------------KLHVNRNH 436

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           +  I  +I     I+ L+ S N I ++P E+ +C  +  + L+ N+I+ +P   L +L S
Sbjct: 437 MVGITEDILHLHNISSLEFSGNIITDIPIEIKNCQKITKIELNYNEIRYFPVG-LCALDS 495

Query: 429 LSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQ 486
           L  L  + N + ++P+D  F      Q+L L +N    L  +  F SL +L+ L L + Q
Sbjct: 496 LYYLSFNGNYISEIPADISFNK----QLLHLEFNENKFLIFSEYFCSLINLRYLDLGKNQ 551

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + + P  I  +  L +L L  N  +  P     L +L  LDLS+N++  +P E+ ++
Sbjct: 552 ISKIPPSISNMISLHVLILCYNKFEIFPRELCTLENLRVLDLSENHLRKIPSEICNL 608



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 18/392 (4%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K    V L+ L L+ N + +L +++  L  L  L+V+ N +  +   I  LH + SL+ 
Sbjct: 396 EKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNHMVGITEDILHLHNISSLEF 455

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N I  IP EI +   + K + + N+++  P  L    +L     + N I+ +P D++ 
Sbjct: 456 SGNIITDIPIEIKNCQKITKIELNYNEIRYFPVGLCALDSLYYLSFNGNYISEIPADISF 515

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++  L+   NK  + S     S   L  L   KN ++ +P +I ++  L  L L  N+
Sbjct: 516 NKQLLHLEFNENKFLIFSE-YFCSLINLRYLDLGKNQISKIPPSISNMISLHVLILCYNK 574

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-- 276
               P  +    +L    +  N L  +P+E+  L  +  L+  SNQ   + +E CQL+  
Sbjct: 575 FEIFPRELCTLENLRVLDLSENHLRKIPSEICNLKGIQKLNFASNQFTYFPIELCQLQSL 634

Query: 277 --LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L++  ++   L+ LP E+  MT L++L ++ N +R +  ++        L+ L S   
Sbjct: 635 EELNLSQINGRKLTSLPEELSNMTQLKELDVSNNEIREIPRNI------GELRNLVSLYA 688

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
            N  +  S      +++        ++L+L G NL+A+PS I +   + ++    N +  
Sbjct: 689 HN--NHISYLPPSFLSLNHL-----QQLNLSGNNLTALPSGIHKLSSLKEIHFDDNPLLR 741

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
            P E+     L T+     +  +  + IL  +
Sbjct: 742 PPMEICKGKQLYTITCYLQRADERDEKILEKI 773



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 8/226 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
            + +   ++L+ L L  N I K+   + N+  L VL + +NK    P  +  L  L+ LD
Sbjct: 533 SEYFCSLINLRYLDLGKNQISKIPPSISNMISLHVLILCYNKFEIFPRELCTLENLRVLD 592

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSL 152
           +S N + KIP EI +   + K + +SNQ    P  L +      LNLS        +TSL
Sbjct: 593 LSENHLRKIPSEICNLKGIQKLNFASNQFTYFPIELCQLQSLEELNLSQINGRK--LTSL 650

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE+L++ +++ +LDV  N++  +  N I     L  L A  N ++ +P +  SL+ L +L
Sbjct: 651 PEELSNMTQLKELDVSNNEIREIPRN-IGELRNLVSLYAHNNHISYLPPSFLSLNHLQQL 709

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +L  N + ++PS I    SL E +  +N L   P E+ K  +L T+
Sbjct: 710 NLSGNNLTALPSGIHKLSSLKEIHFDDNPLLRPPMEICKGKQLYTI 755



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 4/157 (2%)

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           ++L    +QE P ++      + L L +N+IK +       L  L  L L  N L  +PS
Sbjct: 153 VNLVAKGLQEFPKDILKIKYTKYLYLDKNQIKTFDGTDSGDLLGLEILSLQENELLSLPS 212

Query: 445 DGFKDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +    +  L+IL++S+N   +P  P   S L ++++L+     +   P+D+  L+ L IL
Sbjct: 213 E-IHLLHNLRILNVSHN--QIPHIPVEISQLGNIRQLFFDNNYIENLPSDLANLRNLEIL 269

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +L +N L+ IP+   +L +L  L+L  N ++  P  L
Sbjct: 270 NLGKNKLKLIPDTLPSLKNLNVLNLEYNQLTIFPKAL 306


>gi|426235983|ref|XP_004011955.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Ovis
           aries]
          Length = 1246

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 170/320 (53%), Gaps = 17/320 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLK 61
           S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L 
Sbjct: 16  SVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S   + ++P+      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGTPLSRLPEGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              +  +L+ S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E  +  N 
Sbjct: 196 ---LPNDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL 252

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L+ALP  LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE+     
Sbjct: 253 LTALPHSLGKLTKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAE 311

Query: 300 LRKLLLTGNPLRTLRSSLVN 319
           L  L + GN L++L  +L +
Sbjct: 312 LHVLDVAGNRLQSLPFALTH 331



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 42/353 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 74  LPPEVANFMQLVELDV------------------------SRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D     +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGTPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPAS 169

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L +L  LDL  N L  LP  +G +     LLL+ N L+ L   +      ++LK  +
Sbjct: 170 LSFLVKLEQLDLGGNDLEVLPDTLGALPN--DLLLSQNLLQRLPDGIGQLKQLSILKVDQ 227

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +RL   E +EA    E+L            EL L    L+A+P  + +  ++T L++ RN
Sbjct: 228 NRL--CEVTEAIGDCENL-----------SELILTENLLTALPHSLGKLTKLTNLNVDRN 274

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            ++ LPPE+  C +L  L L  N++   P   L   + L  L +  N L+ +P
Sbjct: 275 HLEALPPEIGGCVALSVLSLRDNRLAVLPPE-LAHTAELHVLDVAGNRLQSLP 326



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 28/185 (15%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S + +EL L+   L  +P   +    + KL LS N IQ LPPE+++   L  L +SRN
Sbjct: 33  RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN 92

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 472
            I + P++I                         K    L+I D S   ++ LPE   F+
Sbjct: 93  DIPEIPESI-------------------------KFCKALEIADFSGTPLSRLPEG--FT 125

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L  L L  + L+  P D+  L  L  L+L +N L+S+P     L  L +LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 533 ISALP 537
           +  LP
Sbjct: 186 LEVLP 190



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 24/305 (7%)

Query: 241 ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           +L A+P E+ + S+ L  L L +NQL+E      +L  L  L LS+N +  LPPE+    
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L ++ N +  +         P  +K+ ++     E ++ S T    +        +
Sbjct: 83  QLVELDVSRNDIPEI---------PESIKFCKAL----EIADFSGTPLSRLPEGFTQLRS 129

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L+L  ++L A+P ++     +  L+L  N ++ LP  LS    L+ L L  N ++  
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVL 189

Query: 419 PDAILTSLSSL-SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
           PD    +L +L + L L  N L+++P DG   +  L IL +  N +  + E        +
Sbjct: 190 PD----TLGALPNDLLLSQNLLQRLP-DGIGQLKQLSILKVDQNRLCEVTEA--IGDCEN 242

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L EL L    L   P  + +L +L  L++ +N L+++P       +L+ L L DN ++ L
Sbjct: 243 LSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVL 302

Query: 537 PPELV 541
           PPEL 
Sbjct: 303 PPELA 307



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 43/352 (12%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L  L +L L  N I  +P  ++    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D     L        QLR L+ L L++ SL  LP ++G +  L  L 
Sbjct: 98  PESIKFCKALEIADFSGTPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L++L +SL       L+K  +  L  N          DL  +   L     +L L
Sbjct: 158 LRENLLKSLPASLS-----FLVKLEQLDLGGN----------DLEVLPDTLGALPNDLLL 202

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L  +P  I +  +++ L + +N + E+   +  C +L  LIL+ N +   P + L 
Sbjct: 203 SQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHS-LG 261

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L+ L+ L +D N L  +P                         P       L  L LR 
Sbjct: 262 KLTKLTNLNVDRNHLEALP-------------------------PEIGGCVALSVLSLRD 296

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            +L   P ++    +L +LD++ N LQS+P    +L +L  L L++N    +
Sbjct: 297 NRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHL-NLKALWLAENQAQPM 347



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L+  P +I R  + L  L L  N L+ +P+ F  L +L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQ 72

Query: 535 ALPPELV 541
            LPPE+ 
Sbjct: 73  RLPPEVA 79


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E             +  +  +L+KL L+ N I+ + +
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 113 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 231

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 232 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 291

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 292 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 351

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 352 ELFLNNNQL 360



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 162/360 (45%), Gaps = 39/360 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 98

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 157

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 158 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 217

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 218 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI-- 275

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P EI + 
Sbjct: 276 --------------------------EQLQNL--------KSLDLRSNQLTIFPKEIGQL 301

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  LDL  N +  LP  +    +LQTL L  N++   P  I   L +L  L L+NN L
Sbjct: 302 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI-GQLQNLQELFLNNNQL 360



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 56  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 115

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 116 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 175

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 176 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 234

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 235 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 294

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 295 PKEIGQLKNLQVLDLGSNQLTTL 317



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 114 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 167

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 168 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 219

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 220 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 274

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 275 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 313

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 314 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 344



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 165 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 225 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 285 DLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 343

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 344 IGQLQNLQELFLNNNQLSS 362



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 6/205 (2%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+ E   T  DL T A +  +  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EEFEQQETYTDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 88

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 89  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 146

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 147 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 204

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  LDLS N ++ LP E+
Sbjct: 205 EIGQLQNLQSLDLSTNRLTTLPQEI 229


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 98  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 217 NRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EI ++  L+ L L  N L T
Sbjct: 277 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTT 336

Query: 313 L 313
           +
Sbjct: 337 I 337



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 166 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 225 EIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 285 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 36/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 133

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 134 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 193

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     + +L +  N+LT+L        
Sbjct: 194 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL-------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 246 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L VLDL +N L+ +P EIG++  L+ 
Sbjct: 290 TFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNLQ- 348

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 349 LYLNNNQL 356



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 159/348 (45%), Gaps = 40/348 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL      +N  T L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTIL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L +  N+LT L                        P  IG L  L  L
Sbjct: 108 PKEVEKLENLKELSLGSNRLTTL------------------------PNEIGQLKNLRVL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+  +IP  I    +L    +GNN L+ALP E+G+L  L +LDL SN+L     E 
Sbjct: 144 KLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 203

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL +L  L LS N L+ LP EIG++  L++L L  N L  L + +        L YLRS
Sbjct: 204 GQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTL-YLRS 262

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                  +  +T  +D+  +        K L L    L+  P EI +   +  LDL  N 
Sbjct: 263 -------NRLTTLSKDIEQLQNL-----KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ 310

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +  LP E+    +LQ L L  N++   P  I   L +L  L L+NN L
Sbjct: 311 LTTLPEEIEQLKNLQVLDLGSNQLTTIPKEI-GQLQNLQ-LYLNNNQL 356



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 177/402 (44%), Gaps = 93/402 (23%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS      N   +LP+++     + +L++  N+LT+L                   
Sbjct: 49  RVLNLSA-----NRFKTLPKEIGKLKNLQELNLNKNQLTIL------------------- 84

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ IG L  L +L+LH N+   +P  +    +L E  +G+N L+ LP E+G+L  
Sbjct: 85  -----PKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKN 139

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++  L+ L L  N L TL
Sbjct: 140 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 199

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            + +              +L + +D   ST +                       L+ +P
Sbjct: 200 PNEI-------------GQLQKLQDLYLSTNR-----------------------LTTLP 223

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   + +L L  N +  LP E+    +LQTL L  N++      I   L +L  L 
Sbjct: 224 NEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI-EQLQNLKSLD 282

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L   P +  + +  LQ+LDL  N                        QL   P +
Sbjct: 283 LWNNQLTTFPKE-IEQLKNLQVLDLGSN------------------------QLTTLPEE 317

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           I +L+ L++LDL  N L +IP+    L +L +L L++N +S+
Sbjct: 318 IEQLKNLQVLDLGSNQLTTIPKEIGQLQNL-QLYLNNNQLSS 358



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 141/302 (46%), Gaps = 39/302 (12%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
            LNL +     +P EV K  N  E   G        ++  +  +L+ L L HN  + + +
Sbjct: 96  KLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK 155

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+ +N+L+ LP  IG+L  LKSLD+  N +  +P+EIG    L     S
Sbjct: 156 EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLS 215

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP+ +G+  NL +    +N +T LP ++     +  L +  N+LT LS +    
Sbjct: 216 TNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD---- 271

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                               I  L  L  LDL  N++ + P  I    +L    +G+N L
Sbjct: 272 --------------------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQL 311

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + LP E+ +L  L  LDL SNQL     E  QL+   L L+NN LS    E      +RK
Sbjct: 312 TTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNLQLYLNNNQLSSEEKE-----RIRK 366

Query: 303 LL 304
           LL
Sbjct: 367 LL 368



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 165/350 (47%), Gaps = 49/350 (14%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQE 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L +N L  +P++    +  LQ L L  N + +L ++     L +L+ L L   QL   
Sbjct: 235 LYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD--IEQLQNLKSLDLWNNQLTTF 291

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P +I +L+ L++LDL  N L ++PE  + L +L  LDL  N ++ +P E+
Sbjct: 292 PKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEI 341



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L 
Sbjct: 87  EIGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLK 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P  
Sbjct: 145 LTHNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L +L LS N ++ LP E+
Sbjct: 203 IGQLQKLQDLYLSTNRLTTLPNEI 226


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 137/240 (57%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + +
Sbjct: 152 NLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+  +L+  D S N+L++LP  +G  ++L+D   S N I SLPE +    K+S L
Sbjct: 212 IPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L  + I +   L+EL+ ++N L  +P +IG L RL  L+  +N++LS+P  
Sbjct: 272 KVDQNQLAYLPES-IGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GC SL  F +  N L+ +P+EL + ++L  LD+  N+L    +    L+L  L LS N
Sbjct: 331 IGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTLQLKALWLSEN 390



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 163/354 (46%), Gaps = 41/354 (11%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK----------------------NF------- 32
           D I +  R+   L L    LRD+P + ++                      NF       
Sbjct: 29  DEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELD 88

Query: 33  ----DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
               D  G  D       LQ    + N + KL E    L  LT L+++   L  LP  IG
Sbjct: 89  VSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIG 148

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L SL++  N +  +P+ +     L + D  +N+L  LP S+G  ++L D     N 
Sbjct: 149 NLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNH 208

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +P +L +   +  LDV  NKL  L   +      LT+L+ S+N ++ +PE+IG L +
Sbjct: 209 LTEIPAELGNIKSLLCLDVSENKLEKLPEEM-GGLVSLTDLLVSQNNIDSLPESIGKLRK 267

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL--- 265
           L  L + QN++  +P SI  C SL+E  +  N L +LP  +GKL +L  L+   NQL   
Sbjct: 268 LSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSL 327

Query: 266 -KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            KE  +  C   L+V  +  N L+ +P E+ + T L  L ++GN L  L  SL 
Sbjct: 328 PKE--IGGCS-SLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLT 378



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 166/360 (46%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  IP+ I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILGI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L +      +LR L+ L +++ SL  LP  IG ++ L  L 
Sbjct: 98  PDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL             S+L + E+ +    +   +  +    V+ K+L L
Sbjct: 158 LRENVLTFLPESL-------------SQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G +L+ IP+E+     +  LD+S N +++LP E+    SL  L++S+N I   P++I  
Sbjct: 205 DGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L  +P +   +   L  L L+ N + SLP +     L  L  L   
Sbjct: 264 KLRKLSILKVDQNQLAYLP-ESIGNCESLSELVLTENQLQSLPRS--IGKLKRLFHLNCD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R QL   P +I     L +  + +N L  IP      T L  LD+S N ++ LP  L ++
Sbjct: 321 RNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTL 380



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 190/444 (42%), Gaps = 72/444 (16%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++++D    S++ +PDEI     +L +    +NQL++LP    + + L     S+N I  
Sbjct: 14  VETIDKRHCSLLYVPDEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQI 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P +                        IA++  L EL  S+N + G+P++I     L  
Sbjct: 74  IPAE------------------------IANFMQLVELDVSRNDILGIPDSISHCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S +   +L    + + +L  LP  +G LS L +L+L  N L      
Sbjct: 110 ADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPES 169

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL +L  LDL NN L  LP  IG + +L+ L L GN L  + + L N  +   L    
Sbjct: 170 LSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSE 229

Query: 331 SRL---PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           ++L   PE               M   +S+T  +L +   N+ ++P  I +  +++ L +
Sbjct: 230 NKLEKLPEE--------------MGGLVSLT--DLLVSQNNIDSLPESIGKLRKLSILKV 273

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
            +N +  LP  + +C SL  L+L+ N+++  P +I   L  L  L  D N L  +P +  
Sbjct: 274 DQNQLAYLPESIGNCESLSELVLTENQLQSLPRSI-GKLKRLFHLNCDRNQLLSLPKE-- 330

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                                        L    +R  +L   P+++ +  +L +LD+S 
Sbjct: 331 -----------------------IGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSG 367

Query: 508 NSLQSIPEGFKNLTSLTELDLSDN 531
           N L  +P     L  L  L LS+N
Sbjct: 368 NRLTHLPLSLTTL-QLKALWLSEN 390



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 141/309 (45%), Gaps = 42/309 (13%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 289
           SL E  +  N L  LP +  +L KL  L L  N+++    E A  ++L  LD+S N + G
Sbjct: 37  SLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILG 96

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P  I     L+    +GNPL                    ++LPE+             
Sbjct: 97  IPDSISHCKALQVADFSGNPL--------------------TKLPES------------F 124

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           T    L+     LS+  ++L  +P  I     +  L+L  N +  LP  LS    L+ L 
Sbjct: 125 TELRNLTC----LSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELD 180

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           L  N++   P +I   L SL  L LD N L ++P++   +I  L  LD+S N +  LPE 
Sbjct: 181 LGNNELYSLPQSI-GHLVSLKDLWLDGNHLTEIPAE-LGNIKSLLCLDVSENKLEKLPEE 238

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L  L +L + +  +   P  I +L++L IL + QN L  +PE   N  SL+EL L
Sbjct: 239 --MGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVL 296

Query: 529 SDNNISALP 537
           ++N + +LP
Sbjct: 297 TENQLQSLP 305



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 25/220 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N++ ++  +L N+  L  L+VS NKL +LP  +G L  L  L VS N+I 
Sbjct: 197 VSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNID 256

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ IG    L       NQL  LP S+G C +LS+   + N + SLP  +    ++  
Sbjct: 257 SLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFH 316

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+ + N+L                          +P+ IG  S L    + +NR+  IPS
Sbjct: 317 LNCDRNQLL------------------------SLPKEIGGCSSLNVFCVRENRLTRIPS 352

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +S    L    +  N L+ LP  L  L +L  L L  NQ
Sbjct: 353 ELSQATELHVLDVSGNRLTHLPLSLTTL-QLKALWLSENQ 391


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  +L     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLQSLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLS 337



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG   +L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 42/325 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L     
Sbjct: 113 IGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSL----- 165

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                        ++L+L+   L A+P+EI +   + +L LS N
Sbjct: 166 -----------------------------QKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNIS 534
           L  +P     L +L  L L++N +S
Sbjct: 313 LTMLPNEIGQLQNLQWLKLNNNQLS 337



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 148/307 (48%), Gaps = 23/307 (7%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQS 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                    P  +  L++ +L  + ++E +   ++ I    +L      L L    L+ +
Sbjct: 225 ---------PKEIGQLQNLKLLYSVNNELTILPQE-IGQLQKLQY----LYLSHNQLTTL 270

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   + +L L+ N +  LP E+    +LQT I   N++   P+ I   L +L  L
Sbjct: 271 PKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEI-GQLQNLQWL 329

Query: 433 KLDNNPL 439
           KL+NN L
Sbjct: 330 KLNNNQL 336



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 63/301 (20%)

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+ +L  L +LDL +NQ K    E  QL+ L  L+L NN L  LP EIG++ +
Sbjct: 59  KLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQS 118

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L+L+ N L T          P  +  L++                            
Sbjct: 119 LQTLILSVNRLTTF---------PQEIGQLKNL--------------------------- 142

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L+L+   L+ +  EI +   + KL+L +N ++ LP E+    +LQ L LS N++   P
Sbjct: 143 QKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 202

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           + I   L +L  L L +N L  +P    K+I  LQ L L Y++ +               
Sbjct: 203 EEI-GQLKNLQALILGDNQLTILP----KEIGQLQNLKLLYSVNN--------------- 242

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
                 +L   P +I +LQ+L+ L LS N L ++P+    L +L EL L+DN ++ LP E
Sbjct: 243 ------ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 540 L 540
           +
Sbjct: 297 I 297



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L  N++K+ P  I   L SL  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQSLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L  LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 528 LSDNNISALPPEL 540
           L DN ++ LP E+
Sbjct: 216 LGDNQLTILPKEI 228


>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Mus musculus]
          Length = 524

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 191/392 (48%), Gaps = 56/392 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           LS +P  I     +T L L  N +  LP E+ 
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 213/451 (47%), Gaps = 48/451 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +L +L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P G  +LT+LT L L +N ++ LP E+
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 42/400 (10%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S   I  LP  + + +++++L +  NKL  L    +     L  L  S+N L  +P+++ 
Sbjct: 108 SKRSIHILPPSVKELTQLTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLD 166

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L +L  LDL  N++  IPS +    SL   Y+  N ++ +  ++  L KL  L +  N+
Sbjct: 167 NLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENK 226

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +K+   E  +L  L  LD+++N L  LP EIG  T +  L L  N L  L  ++ N    
Sbjct: 227 IKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN---- 282

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          LS  ++ L L    LSAIP  + +   + 
Sbjct: 283 -------------------------------LSSLNR-LGLRYNRLSAIPRSLAKCSALE 310

Query: 384 KLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +L+L  N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++
Sbjct: 311 ELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKI 370

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P   F    +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L 
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLE 428

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 429 VLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 42/405 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNDLL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 25/180 (13%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L+ +P  IG L+ L  L L                       G N L+ LP E+G+
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGL-----------------------GENLLTHLPEEIGR 515



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLPKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N+      
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ LIL++N ++KL   L NL  L  L++  NKL  LP  I  L  L+ L ++ N + 
Sbjct: 425 VSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLS 484

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
            +P  IG  T L       N L  LP  +GR L +
Sbjct: 485 TLPRGIGHLTNLTHLGLGENLLTHLPEEIGRNLRV 519


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 171/357 (47%), Gaps = 40/357 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+ L L  N L TL         P  +  L++                         
Sbjct: 283 LQNLQVLDLYQNRLTTL---------PKEIGQLQN------------------------- 308

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+ L L  N
Sbjct: 309 --LQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 153/303 (50%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 57  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 163

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 222

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++  L  L L  N L
Sbjct: 283 LQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 342

Query: 311 RTL 313
            TL
Sbjct: 343 ATL 345



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 9/289 (3%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y N  EA +       +DL     + + ++ L +++  L  L +LN  +N+L+ LP  I
Sbjct: 40  LYTNLTEALKNPNEVRILDL-----SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEI 94

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L +  N +  +P+EIG    L     ++NQL  LP  +G+  NL +     N
Sbjct: 95  GKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN 154

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNL-LNGMPETIGS 205
            +  LP+++     + +L +  N+LT+L    I     L +L +  KN     +P+ I  
Sbjct: 155 RLNILPKEIGRLQNLQELYLSLNRLTILPEE-IGQLESLRKLSLGGKNKPFTILPKEITQ 213

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L L  NR+  +P  I    +L    +  N L+ LP E+G+L  L  LDL  NQL
Sbjct: 214 LQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQL 273

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                E  QL+ L VLDL  N L+ LP EIG++  L+KL L+ N L TL
Sbjct: 274 TILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTL 322



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 167/344 (48%), Gaps = 44/344 (12%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 368
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  N L  +P +    +  LQ+LDL  N + +LP+      L +LQ+L+L R QL
Sbjct: 263 LLVLDLSGNQLTILPKE-ITQLQNLQVLDLYQNRLTTLPKE--IGQLQNLQKLHLSRNQL 319

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
              P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 320 TTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 123/276 (44%), Gaps = 39/276 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L  +P E+              +  +L+ L L +N +  L E++  L  L  
Sbjct: 102 ELHLQNNQLTTLPEEI-------------GQLQNLKVLHLNNNQLTTLPEEIGKLQNLQE 148

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS--------- 123
           LN+  N+L+ LP  IG L  L+ L +S N +  +P+EIG   +L K              
Sbjct: 149 LNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILP 208

Query: 124 ----------------NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                           N+L  LP  +G+  NL       N +T LP+++     +  LD+
Sbjct: 209 KEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDL 268

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+LT+L    I     L  L   +N L  +P+ IG L  L +L L +N++ ++P  I 
Sbjct: 269 SGNQLTILPKE-ITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIG 327

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
               L    + +N L+ LP E+ +L  L  L LH+N
Sbjct: 328 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 141/324 (43%), Gaps = 71/324 (21%)

Query: 229 CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 116

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 117 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 165

Query: 402 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 166 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 210

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 211 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
           L +L  LDLS N ++ LP E+  +
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQL 283



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 24/176 (13%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L +L++  N+L+ LP  IG+L  L  LD+S N +  
Sbjct: 216 NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L   D   N+L  LP  +G+  NL     S N +T+LP+++    K+  L
Sbjct: 276 LPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 335

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            ++ N+L  L                        PE I  L  L +L LH N +LS
Sbjct: 336 GLDHNQLATL------------------------PEEIKQLKNLKKLYLHNNPLLS 367


>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
          Length = 524

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 191/392 (48%), Gaps = 56/392 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           LS +P  I     +T L L  N +  LP E+ 
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 213/451 (47%), Gaps = 48/451 (10%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  +   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +L +L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYLR 330
             L+ L L  N LS +P  + K + L +L L  N + TL     SSLV   +  L +   
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           +  L+ LDL  N                        +L   P +I  L+ L+ L L+ N 
Sbjct: 447 LRKLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQ 482

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++P G  +LT+LT L L +N ++ LP E+
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 42/400 (10%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S   I  LP  + + +++++L +  NKL  L    +     L  L  S+N L  +P+++ 
Sbjct: 108 SKRSIHILPPSVKELTQLTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLD 166

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L +L  LDL  N++  IPS +    SL   Y+  N ++ +  ++  L KL  L +  N+
Sbjct: 167 NLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENK 226

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +K+   E  +L  L  LD+++N L  LP EIG  T +  L L  N L  L  ++ N    
Sbjct: 227 IKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN---- 282

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          LS  ++ L L    LSAIP  + +   + 
Sbjct: 283 -------------------------------LSSLNR-LGLRYNRLSAIPRSLAKCSALE 310

Query: 384 KLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           +L+L  N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++
Sbjct: 311 ELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKI 370

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           P   F    +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L 
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLE 428

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +L LS N L+ +P G  NL  L ELDL +N + +LP E+ 
Sbjct: 429 VLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 42/405 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNDLL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 25/180 (13%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L+ +P  IG L+ L  L L                       G N L+ LP E+G+
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGL-----------------------GENLLTHLPEEIGR 515



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 49/230 (21%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLPKLS 218

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN------ 532
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N+      
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 533 ----------------------------------------ISALPPELVS 542
                                                   IS LP  L+S
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 328



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 48/93 (51%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ LIL++N ++KL   L NL  L  L++  NKL  LP  I  L  L+ L ++ N + 
Sbjct: 425 VSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLS 484

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
            +P  IG  T L       N L  LP  +GR L
Sbjct: 485 TLPRGIGHLTNLTHLGLGENLLTHLPEEIGRNL 517


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 49  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 96  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 156 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 215 NRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 274

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EI ++  L+ L L  N L T
Sbjct: 275 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTT 334

Query: 313 L 313
           L
Sbjct: 335 L 335



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 44  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 103

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 104 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 163

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 164 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L + Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 223 EIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 282

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 283 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 312



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 156/322 (48%), Gaps = 17/322 (5%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S+N+ K LP  +G+  NL +   + N +T LP+++     + KL++  N+ T+L   
Sbjct: 49  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 108

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L EL    N L  +P  IG L  L  L L  N+  +IP  I    +L    +G
Sbjct: 109 -VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLG 167

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           NN L+ALP E+G+L  L +LDL SN+L     E  QL +L  L LS N L+ LP EIG++
Sbjct: 168 NNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQL 227

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L  L + +        L YLRS       +  +T  +D+  +      
Sbjct: 228 QNLQDLYLGSNQLTILPNEIGQLKNLQTL-YLRS-------NRLTTLSKDIEQLQNL--- 276

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             K L L    L+  P EI +   +  LDL  N +  LP E+    +LQ L L  N++  
Sbjct: 277 --KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTT 334

Query: 418 WPDAILTSLSSLSCLKLDNNPL 439
            P+ I   L +L  L L+NN L
Sbjct: 335 LPEGI-GQLQNLQ-LYLNNNQL 354



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 145/308 (47%), Gaps = 36/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 72  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 131

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 132 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 191

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     +  L +  N+LT+L        
Sbjct: 192 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTIL-------- 243

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 244 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 287

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L VLDL +N L+ LP  IG++  L+ 
Sbjct: 288 TFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNLQ- 346

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 347 LYLNNNQL 354



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 177/402 (44%), Gaps = 93/402 (23%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS      N   +LP+++     + +L++  N+LT+L                   
Sbjct: 47  RVLNLSA-----NRFKTLPKEIGKLKNLQELNLNKNQLTIL------------------- 82

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ IG L  L +L+LH N+   +P  +    +L E  +G+N L+ LP E+G+L  
Sbjct: 83  -----PKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKN 137

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++  L+ L L  N L TL
Sbjct: 138 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 197

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            + +              +L + +D   ST +                       L+ +P
Sbjct: 198 PNEI-------------GQLQKLQDLYLSTNR-----------------------LTTLP 221

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   +  L L  N +  LP E+    +LQTL L  N++      I   L +L  L 
Sbjct: 222 NEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI-EQLQNLKSLD 280

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L NN L   P +  + +  LQ+LDL  N                        QL   P +
Sbjct: 281 LWNNQLTTFPKE-IEQLKNLQVLDLGSN------------------------QLTTLPEE 315

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           I +L+ L++LDL  N L ++PEG   L +L +L L++N +S+
Sbjct: 316 IEQLKNLQVLDLGSNQLTTLPEGIGQLQNL-QLYLNNNQLSS 356



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 132/263 (50%), Gaps = 12/263 (4%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
            LNL +     +P EV K  N  E   G        ++  +  +L+ L L HN  + + +
Sbjct: 94  KLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+ +N+L+ LP  IG+L  LKSLD+  N +  +P+EIG    L     S
Sbjct: 154 EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLS 213

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP+ +G+  NL D    +N +T LP ++     +  L +  N+LT LS + I  
Sbjct: 214 TNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD-IEQ 272

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N L   P+ I  L  L  LDL  N++ ++P  I    +L    +G+N L
Sbjct: 273 LQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQL 332

Query: 243 SALPAELGKLSKLGTLDLHSNQL 265
           + LP  +G+L  L  L L++NQL
Sbjct: 333 TTLPEGIGQLQNL-QLYLNNNQL 354



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 163/347 (46%), Gaps = 49/347 (14%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 30  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 89

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 90  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 149

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T+   +        LK L++                              L+L    L+A
Sbjct: 150 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 173

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 174 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQD 232

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L +N L  +P++    +  LQ L L  N + +L ++     L +L+ L L   QL   
Sbjct: 233 LYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD--IEQLQNLKSLDLWNNQLTTF 289

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           P +I +L+ L++LDL  N L ++PE  + L +L  LDL  N ++ LP
Sbjct: 290 PKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLP 336



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 38/236 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L  +PNE+ +                                 L+NL     
Sbjct: 163 TLNLGNNQLTALPNEIGQ---------------------------------LQNLK---S 186

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +S N +  +P+EIG    L      SNQL  LP+ 
Sbjct: 187 LDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE 246

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+L +D+     +  LD+  N+LT      I     L  L   
Sbjct: 247 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLG 305

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
            N L  +PE I  L  L  LDL  N++ ++P  I    +L + Y+ NN LS+   E
Sbjct: 306 SNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNL-QLYLNNNQLSSEEKE 360



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 26  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 84

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L 
Sbjct: 85  EIGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLK 142

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P  
Sbjct: 143 LTHNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE 200

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L  L +L LS N ++ LP E+
Sbjct: 201 IGQLQKLQDLYLSTNRLTTLPNEI 224


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 190/402 (47%), Gaps = 43/402 (10%)

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           D + ++N +T LP+++     + +L++  NKLT L    I     L  L   +N L  +P
Sbjct: 55  DLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEE-IGQLQNLQILHLCENQLTTLP 113

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L RL  L L  N++ ++P  I    +L E  +    LS LP E+GKL KL  L L
Sbjct: 114 KEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSL 173

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+      E  QL+ L +L L  N L+ LP EI  +  L++L L  N L TL      
Sbjct: 174 DLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITL------ 227

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              P  +  LR+                            K L+LE   L  IP EI + 
Sbjct: 228 ---PKEIGKLRN---------------------------LKILNLEDNQLMIIPKEIEQL 257

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             + KL+L RN +  L   +    +L+ L L  N++   P  I   L +L  L L NN L
Sbjct: 258 ENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEI-GKLQNLKILNLCNNEL 316

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
             + S+G   +  LQ LDL +N + +LP+      L +L+ L L   QL   P  I +LQ
Sbjct: 317 TTL-SNGIGRLQNLQKLDLRFNQLTTLPK--EIGKLQNLKVLDLYNNQLTTLPKKIGKLQ 373

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L++LDL  N L ++P+    L +L +L+L+ N ++ LP ++
Sbjct: 374 NLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDI 415



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 183/395 (46%), Gaps = 39/395 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +  L E++  L  L +L++  N+L+ LP  IG+L  L+ L ++ N +  
Sbjct: 75  NLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTT 134

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L + + +  QL  LP  +G+   L       N  T+LP+++     +  L
Sbjct: 135 LPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQIL 194

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L   +I     L EL  + N L  +P+ IG L  L  L+L  N+++ IP  
Sbjct: 195 YLRANQLTNLPKEII-HLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKE 253

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +G N L+ L   +G L  L  L L  NQL     E  +L+ L +L+L N
Sbjct: 254 IEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCN 313

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L   IG++  L+KL L  N L TL   +  G    L                   
Sbjct: 314 NELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEI--GKLQNL------------------- 352

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          K L L    L+ +P +I +   +  LDL  N +  LP E+    +
Sbjct: 353 ---------------KVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQN 397

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+ L L+ N++   P  I   L  L+ L L NNP+
Sbjct: 398 LRQLNLNHNQLTILPKDI-EQLKKLNTLSLRNNPI 431



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 10/177 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV-----DLQKLILAH---NNIE 58
           R    LNL +  L  +P E+   +N  +   G      +     DLQ L   H   N + 
Sbjct: 235 RNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLT 294

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L +LN+ +N+L+ L   IG L  L+ LD+ FN +  +P EIG    L  
Sbjct: 295 TLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKV 354

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            D  +NQL  LP  +G+  NL       N +T+LP+++     + +L++  N+LT+L
Sbjct: 355 LDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTIL 411



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 7/167 (4%)

Query: 380 GEITKLDLSRN--SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
            E+  LDL  N   +  LP E+    +LQ L L+ NK+   P+ I   L +L  L L  N
Sbjct: 49  NEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEI-GQLQNLQILHLCEN 107

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
            L  +P +    +  LQIL L++N + +LPE      L +LQEL L   QL   P +I +
Sbjct: 108 QLTTLPKE-IGQLQRLQILHLAHNKLTTLPE--EIGQLQNLQELNLNGWQLSTLPKEIGK 164

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           LQ+L++L L  N   ++P+    L +L  L L  N ++ LP E++ +
Sbjct: 165 LQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHL 211



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N +  L +++  L  L VL++ +N+L+ LP  IG+L  LK LD+ +N +  
Sbjct: 328 NLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTT 387

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L + + + NQL  LP  + +   L+     NN I S
Sbjct: 388 LPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLRNNPIAS 433


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P E+              +  +L+KL L+ N I+ + +++  L  L  L
Sbjct: 74  LNLNKNQLTILPKEI-------------GQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 120

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S NQ+K +P  +
Sbjct: 121 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 180

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L      NN +T+LP+++     +  LD+  N+LT L    I     L +L    
Sbjct: 181 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHLQNLQDLYLVS 239

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+G+L 
Sbjct: 240 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 299

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L TL+L SNQL        QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 300 NLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 50  ILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------ 179
            + +   L      NN +T+LP+++    K+  L +  N+LT L   +            
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 180 ----------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                     I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I   
Sbjct: 170 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 229

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+
Sbjct: 230 QNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 289

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
             P EIG++  L+ L L  N L TL
Sbjct: 290 TFPKEIGQLKNLQTLNLGSNQLTTL 314



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 156/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 271

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L+ L+L  N 
Sbjct: 272 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 311 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 341



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 162 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 282 DLRSNQLTTFPKE-IGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 341 IGQLQNLQELFLNNNQLSS 359



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 87  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 144

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+ 
Sbjct: 145 LPKNQLTTLPQE--IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
              L +L  LDLS N ++ LP E+
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEI 226


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 197/413 (47%), Gaps = 50/413 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N +M++P        L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + + 
Sbjct: 136 NDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPES-VG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL K                      LS+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKK----------------------LSILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
             L    L+ IP+E+ +A E+  LDL+ N +  LP  L++   L+ L LS N+
Sbjct: 340 FCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTA-LKLKALWLSDNQ 391



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 157/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L  L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIHSLPESVGALLCL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  L  N L  IP      T L  LDL+ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTAL 380



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R + + +EL L+   L  +P + ++  ++ KL LS N IQ LPPE+++   L  L +SRN
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I + P++I +   +L       NPL ++P   F ++  L  L ++  ++ SLPEN    
Sbjct: 93  DIPEIPESI-SFCKALQIADFSGNPLMRLPK-SFPELENLTCLSVNDVSLQSLPEN--IG 148

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L +L  L LR   L   P  + +L++L  LDL  N + S+PE    L  L +L L  N 
Sbjct: 149 NLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQ 208

Query: 533 ISALPPEL 540
           +S LP E+
Sbjct: 209 LSELPQEI 216



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|260788670|ref|XP_002589372.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
 gi|229274549|gb|EEN45383.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
          Length = 445

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 192/429 (44%), Gaps = 44/429 (10%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +    +K D S+  L  +P  +    +L     SNN +TS+PE +    K+ +LD + N 
Sbjct: 11  TVNGRLKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNT 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I S   LT L    N L+ +P  +  L +L +L +  N++   PS +    +
Sbjct: 71  LTSLP-QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPN 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    +  N L   P  + KL KL TL ++ NQL E     C L  L VL +SNN LS  
Sbjct: 130 LEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTF 189

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L + GN L  + S + + P   +L    + L     S      E L  
Sbjct: 190 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNL-----STFPPGVEKLQK 244

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +        +EL + G  L+ +PS +     +  L +  N I+ LP +++  A L+TL +
Sbjct: 245 V--------RELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSV 296

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ---VPSDGFKDIPMLQILDLSYNIASLPE 467
              +  ++P  +L  L +L  L    N  R+   VP D   ++  L +L L YN+     
Sbjct: 297 PGCQFDEFPRQVL-HLKTLEELYAGQNGGRKFDMVP-DEVGNLQHLWLLSLEYNL----- 349

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                              LR  P+ +  L  LR++ L  N   + PE    L ++ +LD
Sbjct: 350 -------------------LRTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMEKLD 390

Query: 528 LSDNNISAL 536
           + +NNI+ L
Sbjct: 391 IRNNNITRL 399



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 200/474 (42%), Gaps = 73/474 (15%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++  +  + E++ ++  L  L+VS+NKL+ +P A+G L  L  LD  +N++  +P 
Sbjct: 17  KLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQ 76

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            IGS   L       N+L  LP  + +   L+     NN +T  P  +     +  L+V 
Sbjct: 77  AIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEVS 136

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NKL                           P  +  L +L  L ++ N++  +P  +  
Sbjct: 137 YNKLP------------------------NFPPVVEKLQKLRTLYINGNQLTEVPPGVCL 172

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +L    + NN LS  P  + KL KL  L ++ NQL E     C L  L VL + NN+L
Sbjct: 173 LPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNL 232

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTT 344
           S  PP + K+  +R+L + GN L  + S +   P   +L    +   RLP +        
Sbjct: 233 STFPPGVEKLQKVRELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPND-------- 284

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL---PPELSS 401
               +T   RL    K LS+ G      P ++     + +L   +N  ++    P E+ +
Sbjct: 285 ----VTRLARL----KTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGN 336

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
              L  L L  N ++  P + ++ L +L  ++L NN       D F ++           
Sbjct: 337 LQHLWLLSLEYNLLRTLP-STMSHLHNLRVVQLPNNKF-----DTFPEV----------- 379

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                       LP +++L +R   +    T + R  +LR LD+S N L   P+
Sbjct: 380 ---------LCELPAMEKLDIRNNNITRLLTALHRADKLRDLDVSGNPLTYPPQ 424



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 179/425 (42%), Gaps = 49/425 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 18  LDLSNQGLTSIPEEVF-------------DITDLEFLDVSNNKLTSIPEAVGRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  +N L+ LP AIG L  L  L +  N +  +P  +     L K    +NQL   PS +
Sbjct: 65  DADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGV 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL   + S N + + P  +    K+  L + GN+LT +    +     L  L  S 
Sbjct: 125 CSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPG-VCLLPNLEVLSVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +PS +    +L    + NN LS  P  + KL 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQ 243

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           K+  L ++ NQL E     C L  L VL +  N +  LP ++ ++  L+ L + G     
Sbjct: 244 KVRELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDE 303

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                     P  + +L+             T E+L                 G     +
Sbjct: 304 F---------PRQVLHLK-------------TLEELYAGQN-----------GGRKFDMV 330

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P E+     +  L L  N ++ LP  +S   +L+ + L  NK   +P+ +L  L ++  L
Sbjct: 331 PDEVGNLQHLWLLSLEYNLLRTLPSTMSHLHNLRVVQLPNNKFDTFPE-VLCELPAMEKL 389

Query: 433 KLDNN 437
            + NN
Sbjct: 390 DIRNN 394



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 45/350 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+T+      ++LDL    + SIP  +     L    + NN L+++P  +G+L KL
Sbjct: 5   LNLQPQTVNGR---LKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKL 61

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD   N L         L +L+ L + +N LS LPP + K+  L KL +  N L    
Sbjct: 62  YRLDADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFP 121

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S + + P   +L+   ++LP                                      P 
Sbjct: 122 SGVCSLPNLEVLEVSYNKLPN------------------------------------FPP 145

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            + +  ++  L ++ N + E+PP +    +L+ L +S NK+  +P  +   L  L  L +
Sbjct: 146 VVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGV-EKLQKLRELYI 204

Query: 435 DNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N L +VPS G   +P L++L + + N+++ P  P    L  ++ELY+   QL E P+ 
Sbjct: 205 YGNQLTEVPS-GVCSLPNLEVLSVYNNNLSTFP--PGVEKLQKVRELYIYGNQLTEVPSG 261

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +  L  L +L +  N ++ +P     L  L  L +        P +++ +
Sbjct: 262 VCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVLHL 311



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 51/335 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL + +N +      + +LP L VL VS+NKL   P  + +L  L++L ++ N + ++
Sbjct: 107 LTKLFIGNNQLTGFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEV 166

Query: 107 PD--------EIGSAT---------------ALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P         E+ S +                L +     NQL E+PS +    NL    
Sbjct: 167 PPGVCLLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLS 226

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             NN +++ P  +    K+ +L + GN+LT + +  +     L  L    N +  +P  +
Sbjct: 227 VYNNNLSTFPPGVEKLQKVRELYIYGNQLTEVPSG-VCLLPNLEVLSVGMNPIRRLPNDV 285

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA---------------------- 241
             L+RL  L +   +    P  +    +L E Y G N                       
Sbjct: 286 TRLARLKTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSL 345

Query: 242 ----LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
               L  LP+ +  L  L  + L +N+   +    C+L  +  LD+ NN+++ L   + +
Sbjct: 346 EYNLLRTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMEKLDIRNNNITRLLTALHR 405

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
              LR L ++GNPL      +    T A++ +L+ 
Sbjct: 406 ADKLRDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQ 440


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E L+N   + +LN+ H  L+ LP  IG L  L+ LD+    +  +P EIG    L + D 
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDL 90

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +SNQL + P  +G    L      +N   +LP+++    K+  L++  N+LT L N  I 
Sbjct: 91  TSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNE-IG 149

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L    +G+N 
Sbjct: 150 KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQ 209

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP E+GKL KLG L+L  NQL+    E  +LR L  LDL++N L  LP EIG +  L
Sbjct: 210 LGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269

Query: 301 R 301
           R
Sbjct: 270 R 270



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 31/223 (13%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +DL+KL      I +L+        L  L+++ N+L++ P  IG L  LK L +  N 
Sbjct: 65  ERLDLEKLTTLPKEIGRLQN-------LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQ 117

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P EIG    L   + S+NQL  LP+ +G+  +L     SNN +TSLP+++     +
Sbjct: 118 FATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNL 177

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+                        L  +P+ IG L  L  LDL  N++ ++
Sbjct: 178 QYLDLFYNQ------------------------LGNLPKEIGKLRNLEWLDLGSNQLGNL 213

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I     L E  +  N L +LP E+GKL KL  LDL SNQL
Sbjct: 214 PQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL  +      +TSLP+++    ++ +LD+E  KLT L    I     L EL  + N
Sbjct: 42  RILNLGHY-----PLTSLPQEIGTLQRLERLDLE--KLTTLPKE-IGRLQNLEELDLTSN 93

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG+L RL  L L  N+  ++P  I     L    + NN L+ LP E+GKL  
Sbjct: 94  QLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRS 153

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L +NQL     E  +LR L  LDL  N L  LP EIGK+  L  L L  N L   
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQL--- 210

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                              LP+             I    +L     EL L G  L ++P
Sbjct: 211 -----------------GNLPQE------------IGKLQKLG----ELELSGNQLRSLP 237

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            EI +  ++ KLDL+ N + +LP E+ +   L+ 
Sbjct: 238 QEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRLRA 271



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 1/182 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N + K  +++  L  L  L++  N+ + LP  IG+L  L+ L++S N +  
Sbjct: 84  NLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTT 143

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG   +L +   S+NQL  LP  + +  NL       N + +LP+++     +  L
Sbjct: 144 LPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWL 203

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  S N L  +P+ IG L +L +LDL  N+++ +P  
Sbjct: 204 DLGSNQLGNLPQE-IGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262

Query: 226 IS 227
           I 
Sbjct: 263 IG 264



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 34/239 (14%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG+L RL RLDL   ++ ++P  I    +L E  + +N L+  P E+G L +L
Sbjct: 51  LTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQRL 108

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L SNQ      E  +LR L  L+LSNN L+ LP EIGK+ +L++L L+ N L +L 
Sbjct: 109 KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL- 167

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----LEGMNLS 370
                   P  +  LR+              + L     +L    KE+     LE ++L 
Sbjct: 168 --------PQEINKLRNL-------------QYLDLFYNQLGNLPKEIGKLRNLEWLDLG 206

Query: 371 A-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +     +P EI +  ++ +L+LS N ++ LP E+     L+ L L+ N++   P  I T
Sbjct: 207 SNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGT 265



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N    L +++  L  L  LN+S+N+L+ LP  IG+L  LK L +S N +  +
Sbjct: 108 LKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL 167

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L   D   NQL  LP  +G+  NL      +N + +LP+++    K+ +L+
Sbjct: 168 PQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELE 227

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           + GN+L  L    I     L +L  + N L  +P+ IG+L RL
Sbjct: 228 LSGNQLRSLPQE-IGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 131/308 (42%), Gaps = 88/308 (28%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +G+  L++LP E+G L +L  LDL                          L+ LP EIG+
Sbjct: 46  LGHYPLTSLPQEIGTLQRLERLDLEK------------------------LTTLPKEIGR 81

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L +L LT N L                    ++ P+             I    RL 
Sbjct: 82  LQNLEELDLTSNQL--------------------AKFPQE------------IGTLQRL- 108

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              K LSLE    + +P EI +  ++  L+LS N +  LP E+    SL+ L LS N++ 
Sbjct: 109 ---KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLT 165

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             P  I              N LR            LQ LDL YN + +LP+      L 
Sbjct: 166 SLPQEI--------------NKLRN-----------LQYLDLFYNQLGNLPKE--IGKLR 198

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +L+ L L   QL   P +I +LQ+L  L+LS N L+S+P+    L  L +LDL+ N +  
Sbjct: 199 NLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVK 258

Query: 536 LPPELVSV 543
           LP E+ ++
Sbjct: 259 LPQEIGTL 266



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 7/180 (3%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+L    L+++P EI     + +LDL +  +  LP E+    +L+ L L+ N++  +P  
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLEK--LTTLPKEIGRLQNLEELDLTSNQLAKFPQE 101

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I T L  L  L L++N    +P +    +  L+ L+LS N + +LP       L  L+ L
Sbjct: 102 IGT-LQRLKWLSLESNQFATLPKE-IGKLRKLEWLNLSNNQLTTLPNE--IGKLRSLKRL 157

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YL   QL   P +I +L+ L+ LDL  N L ++P+    L +L  LDL  N +  LP E+
Sbjct: 158 YLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEI 217


>gi|323452027|gb|EGB07902.1| hypothetical protein AURANDRAFT_64486 [Aureococcus anophagefferens]
          Length = 979

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 253/562 (45%), Gaps = 48/562 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD-KWWEAVDLQKLILAHNNIEKLKE 62
           +L+ AR SG L LS+R LR +P E Y    E  + D K+WE V+L+ L    N  ++L  
Sbjct: 12  VLRRARASGFLELSDRRLRALPVEAYAPTPEDLDPDEKFWEIVELRSLDATGNLFDELPG 71

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           D R++  L  L V  N+L  LP  I  +L  L+ LD   N I  +P   G   +L     
Sbjct: 72  DWRSVGTLRQLRVGKNRLCALPEGIFADLPNLEVLDCGDNQIRHLPGFQGCGASLKTLLA 131

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNN----CITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
             N+L+ L + +     L       N    C+  LPE      ++ K+D E   LTV+  
Sbjct: 132 PRNRLQALDAGVLGLAALEALDVGGNVDLKCLPRLPE------RLQKVDAENCGLTVVDR 185

Query: 178 NLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
               + T    L  SKN L+ G+   +     L  LDL  N + +   +I    +L+  +
Sbjct: 186 LPEEART----LCLSKNRLSEGV--DVRHCRWLTYLDLRSNGMATY--AIPDLPNLSHVF 237

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI 294
           +G+N L  +  E      L  +DL +N+L+     + AC   L  +D SNN L  +P  +
Sbjct: 238 LGHNGLGDVALEKPS-DALAHVDLGANRLRHLPPALGACGG-LQSIDASNNDLGEVPAAL 295

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-----ENEDSEASTTKED-- 347
           G +  L +L L GNPLRTLR  L+      L  YLR+R P     E E +  S++ +D  
Sbjct: 296 GYLPKLHRLSLEGNPLRTLRRDLLTQGCDRLKAYLRTRGPSLLPEEAELARPSSSGDDRL 355

Query: 348 ---LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL---PPELSS 401
               +    R   +   L L+G  L   P    +A  I     + + + E    P + + 
Sbjct: 356 DLRFLANGVRDPESRGVLDLKGRKLERCPLSRDDARTIRDDLAADDGLDEYVADPRKRAL 415

Query: 402 CASLQTLILSRNKIKDWPD-AILTSLS-SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
            A +Q +  S N +   P+ A+L  L  +LS LKL  N L  +P      +P L+ LD  
Sbjct: 416 VAKVQVVDASNNDLAQPPEAAVLLELGPALSELKLCRNKLSALPLAALARVP-LKRLDCR 474

Query: 460 YNIASLPEN----PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IP 514
            N     E      P  +  HL EL     +LR  P  +     LR L L +N++   + 
Sbjct: 475 ENAIDRDEFLDAVSPLGA--HLTELDASSNRLRAVPRSVFACVALRSLRLPRNAIAGDLQ 532

Query: 515 EGFKNLTSLTELDLSDNNISAL 536
            G+  L SL  LD++DN +++L
Sbjct: 533 RGWGALVSLETLDVADNRLTSL 554



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQL 265
           + L  LD   NR+ ++P S+  C +L    +  NA++  L    G L  L TLD+  N+L
Sbjct: 492 AHLTELDASSNRLRAVPRSVFACVALRSLRLPRNAIAGDLQRGWGALVSLETLDVADNRL 551

Query: 266 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                     RL VLDL+NNS+  +PPE+G    LR L+L GNP R++R++ +   TP +
Sbjct: 552 TSLGDVHAAPRLRVLDLANNSIRNVPPELGLCPELRTLVLHGNPQRSVRAADLPRDTPKV 611

Query: 326 LKYLRSRLPENEDSEASTTKE 346
           L  LR RLP N    A +  E
Sbjct: 612 LAKLRDRLPANVGDRAPSPLE 632


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 172/380 (45%), Gaps = 71/380 (18%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS      N   +LP+++     + +L++  N+LT+L                   
Sbjct: 49  RVLNLSA-----NRFKTLPKEIGKLKNLQELNLNKNQLTIL------------------- 84

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ IG L  L +L+L+ N+   +P  +    +L E Y+G+N L+ LP E+G+L  
Sbjct: 85  -----PKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKN 139

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  NQ K    E  QL+ L  L+L  N L+ LP EIG++  L+ L L  N L  L
Sbjct: 140 LRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTAL 199

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            + +        L+ L+S                              L L    L+ +P
Sbjct: 200 PNEI------GQLQNLQS------------------------------LYLSTNRLTTLP 223

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           +EI +   +  L L  N +  LP E+    +LQTL L  N+    P  I   L +L  L+
Sbjct: 224 NEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEI-GKLQNLQRLE 282

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L+ N L+ +P  G   +  LQ LDL YN    LPE      L +LQELYLR  QL   P 
Sbjct: 283 LNYNQLKTLPK-GIGQLQNLQWLDLGYNQFTILPE--EIGKLKNLQELYLRDNQLTTIPE 339

Query: 493 DILRLQQLRILDLSQNSLQS 512
           +I +LQ L+ L L  N L S
Sbjct: 340 EIGQLQNLQELYLRDNQLSS 359



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 145/301 (48%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L   + + NQ K +P  +
Sbjct: 98  NLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N +T+LP ++     +  L +  N+LT L N  I     L  L  S 
Sbjct: 158 GQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNE-IGQLQNLQSLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+  N  + LP E+GKL 
Sbjct: 217 NRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L+ NQLK       QL+ L  LDL  N  + LP EIGK+  L++L L  N L T
Sbjct: 277 NLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTT 336

Query: 313 L 313
           +
Sbjct: 337 I 337



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 12/287 (4%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  
Sbjct: 73  ELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPN 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL ++HN+   +P  IG+L  L++L++ +N +  +P+EIG    L      
Sbjct: 133 EIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLG 192

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SNQL  LP+ +G+  NL     S N +T+LP ++     +  L +  N+LT+L N  I  
Sbjct: 193 SNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNE-IGQ 251

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N    +P+ IG L  L RL+L+ N++ ++P  I    +L    +G N  
Sbjct: 252 LKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQF 311

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           + LP E+GKL  L  L L  NQL     E  QL+ L  L L +N LS
Sbjct: 312 TILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLS 358



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 123/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K +   NQ   LP 
Sbjct: 50  VLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL +    +N +T+LP ++     +  L++  N+   +    I     L  L  
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKE-IGQLKNLQTLNL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  L L  N++ ++P+ I    +L   Y+  N L+ LP E+G+
Sbjct: 169 GYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L SNQL     E  QL+ L  L L  N  + LP EIGK+  L++L L  N L
Sbjct: 229 LQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQL 288

Query: 311 RTL 313
           +TL
Sbjct: 289 KTL 291



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 156/348 (44%), Gaps = 39/348 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL      +N  T L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L +  N+LT L N  I     L  L  + N    +P+ IG L  L  L
Sbjct: 108 PKEVEKLENLKELYLGSNQLTTLPNE-IGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ ++P+ I    +L   Y+G+N L+ALP E+G+L  L +L L +N+L     E 
Sbjct: 167 NLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI 226

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L +N L+ LP EIG++  L+ L L  N   TL   +  G    L      
Sbjct: 227 GQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEI--GKLQNL------ 278

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       + L L    L  +P  I +   +  LDL  N 
Sbjct: 279 ----------------------------QRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQ 310

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
              LP E+    +LQ L L  N++   P+ I   L +L  L L +N L
Sbjct: 311 FTILPEEIGKLKNLQELYLRDNQLTTIPEEI-GQLQNLQELYLRDNQL 357



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 163/350 (46%), Gaps = 49/350 (14%)

Query: 200 PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFK 151

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGYNQLTA 175

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+EI +   +  L L  N +  LP E+    +LQ+L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI-GQLQNLQS 234

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L L +N L  +P++    +  LQ L L YN   +LP+      L +LQ L L   QL+  
Sbjct: 235 LYLGSNQLTILPNE-IGQLKNLQTLYLRYNQFTTLPK--EIGKLQNLQRLELNYNQLKTL 291

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           P  I +LQ L+ LDL  N    +PE    L +L EL L DN ++ +P E+
Sbjct: 292 PKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEI 341



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 27/226 (11%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD------------ 445
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++            
Sbjct: 87  EIGQLKNLRKLNLYDNQFTILPKEV-EKLENLKELYLGSNQLTTLPNEIGQLKNLRVLEL 145

Query: 446 ---GFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
               FK IP        LQ L+L YN + +LP       L +LQ LYL   QL   P +I
Sbjct: 146 THNQFKTIPKEIGQLKNLQTLNLGYNQLTALPN--EIGQLKNLQSLYLGSNQLTALPNEI 203

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +LQ L+ L LS N L ++P     L +L  L L  N ++ LP E+
Sbjct: 204 GQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEI 249


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 192/402 (47%), Gaps = 80/402 (19%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK--------------NLLNGMPET 202
           A   + ++LD+ GN LTVL  + I   T L +LI  K              N L+ +P  
Sbjct: 13  AAREEWTELDLSGNDLTVLPPD-IGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPRE 71

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L +L  L +  N++  +P  I    SL    +G N +  LP E+G+L+ L +LDL  
Sbjct: 72  IGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRY 131

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+++E   E  QL  L  L+LS N++  LPPEIG++T           L++L  S  N  
Sbjct: 132 NKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTA----------LQSLDLSFFN-- 179

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                                                         N+  +P +I++   
Sbjct: 180 ----------------------------------------------NIQELPPQIFQLTS 193

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  L LS N IQELP E+    SLQ+L LS NKI++ P  IL  L+SL  L L  N +++
Sbjct: 194 LQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQE 252

Query: 442 VPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           +P++  + +  LQ L+L S NI  LP  P    L  LQ L L    ++E P +IL+L  L
Sbjct: 253 LPAEILQ-LTSLQSLNLYSNNIQELP--PEILQLTSLQSLNLGGNNIQELPPEILQLTSL 309

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           + L+L  N++Q +P   + L +L +LDL  N +  +PPE++ 
Sbjct: 310 QSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPL-PIPPEILG 350



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 178/359 (49%), Gaps = 73/359 (20%)

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           TEL  S N L  +P  IG L+ L +L L + +       I+G       ++GN  LSALP
Sbjct: 19  TELDLSGNDLTVLPPDIGKLTHLKKLILGKYQ-YDDEGDIAG-------FIGN-KLSALP 69

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L +L  L +  NQL+E   E  QL  L  L+L  N +  LPPEIG++T+L+ L L
Sbjct: 70  REIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDL 129

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N ++ L       P    L  L+S                              L+L 
Sbjct: 130 RYNKIQEL------PPEIGQLTSLQS------------------------------LNLS 153

Query: 366 GMNLSAIPSEIWEAGEITKLDLSR-NSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           G N+  +P EI +   +  LDLS  N+IQELPP++    SLQ+L LS NKI++ P  IL 
Sbjct: 154 GNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEIL- 212

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L+SL  L L  N ++++P++         IL L+                 LQ L+L  
Sbjct: 213 QLTSLQSLHLSFNKIQELPAE---------ILQLT----------------SLQSLHLSF 247

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +++E P +IL+L  L+ L+L  N++Q +P     LTSL  L+L  NNI  LPPE++ +
Sbjct: 248 NKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQL 306



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 146/270 (54%), Gaps = 11/270 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +A N +++L  ++  L  L  LN+  NK+ ELP  IG+L  L+SLD+ +N I ++
Sbjct: 78  LEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQEL 137

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----RCLNLSDFKASNNCITSLPEDLADCSK 161
           P EIG  T+L   + S N ++ELP  +G     + L+LS F    N I  LP  +   + 
Sbjct: 138 PPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFF----NNIQELPPQIFQLTS 193

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  NK+  L   ++   T L  L  S N +  +P  I  L+ L  L L  N+I  
Sbjct: 194 LQSLHLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQE 252

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL    + +N +  LP E+ +L+ L +L+L  N ++E   E  QL  L  L
Sbjct: 253 LPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSL 312

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L +N++  LPPEI ++  L+KL L  NPL
Sbjct: 313 NLRSNNIQELPPEIRQLPNLKKLDLRSNPL 342



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 13/266 (4%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L  ++  L  L  L ++ N+L ELP  I +L  L+SL++  N I ++P EIG  T
Sbjct: 63  NKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLT 122

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L   D   N+++ELP  +G+  +L     S N I  LP ++   + +  LD+       
Sbjct: 123 SLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLS------ 176

Query: 175 LSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
             NN+      I   T L  L  S N +  +P  I  L+ L  L L  N+I  +P+ I  
Sbjct: 177 FFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQ 236

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             SL   ++  N +  LPAE+ +L+ L +L+L+SN ++E   E  QL  L  L+L  N++
Sbjct: 237 LTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNI 296

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTL 313
             LPPEI ++T+L+ L L  N ++ L
Sbjct: 297 QELPPEILQLTSLQSLNLRSNNIQEL 322



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 42/325 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           NKLS LP  IG+LH L+ L ++ N + ++P EI   T+L   +   N+++ELP  +G+  
Sbjct: 63  NKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLT 122

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLL 196
           +L       N I  LP ++   + +  L++ GN +  L    I   T L  L ++  N +
Sbjct: 123 SLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPE-IGQLTALQSLDLSFFNNI 181

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  I  L+ L  L L  N+I  +P+ I    SL   ++  N +  LPAE+ +L+ L 
Sbjct: 182 QELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQ 241

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +L L  N+++E   E  QL  L  L+L +N++  LPPEI ++T+L+ L L GN ++ L  
Sbjct: 242 SLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPP 301

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPS 374
            +                                     L +TS + L+L   N+  +P 
Sbjct: 302 EI-------------------------------------LQLTSLQSLNLRSNNIQELPP 324

Query: 375 EIWEAGEITKLDLSRNSIQELPPEL 399
           EI +   + KLDL  N +  +PPE+
Sbjct: 325 EIRQLPNLKKLDLRSNPL-PIPPEI 348



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 4/250 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N I++L  ++  L  L  L++ +NK+ ELP  IG+L  L+SL++S N+I ++
Sbjct: 101 LQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQEL 160

Query: 107 PDEIGSATALVKFDCS-SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EIG  TAL   D S  N ++ELP  + +  +L     S N I  LP ++   + +  L
Sbjct: 161 PPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NK+  L   ++   T L  L  S N +  +P  I  L+ L  L+L+ N I  +P  
Sbjct: 221 HLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    SL    +G N +  LP E+ +L+ L +L+L SN ++E   E  QL  L  LDL +
Sbjct: 280 ILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRS 339

Query: 285 NSLSGLPPEI 294
           N L  +PPEI
Sbjct: 340 NPLP-IPPEI 348



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 141/283 (49%), Gaps = 28/283 (9%)

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           N+L +   +A +   + LDLS N L+ LPP+IGK+T L+KL+L              G  
Sbjct: 4   NELLQLIEQAAREEWTELDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDD------EGDI 57

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              +    S LP              I    +L    +EL +    L  +P EI +   +
Sbjct: 58  AGFIGNKLSALPRE------------IGQLHQL----EELQIALNQLQELPPEILQLTSL 101

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L+L  N IQELPPE+    SLQ+L L  NKI++ P  I   L+SL  L L  N ++++
Sbjct: 102 QSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEI-GQLTSLQSLNLSGNNIQEL 160

Query: 443 PSDGFKDIPMLQILDLSY--NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
           P +    +  LQ LDLS+  NI  LP  P    L  LQ L+L   +++E P +IL+L  L
Sbjct: 161 PPE-IGQLTALQSLDLSFFNNIQELP--PQIFQLTSLQSLHLSFNKIQELPAEILQLTSL 217

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + L LS N +Q +P     LTSL  L LS N I  LP E++ +
Sbjct: 218 QSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQL 260



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH-NNIEKLKEDLRNLPLLT 71
           SLNLS  +++++P E+              +   LQ L L+  NNI++L   +  L  L 
Sbjct: 149 SLNLSGNNIQELPPEI-------------GQLTALQSLDLSFFNNIQELPPQIFQLTSLQ 195

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S NK+ ELPA I +L  L+SL +SFN I ++P EI   T+L     S N+++ELP+
Sbjct: 196 SLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPA 255

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L      +N I  LP ++   + +  L++ GN +  L   ++   T L  L  
Sbjct: 256 EILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEIL-QLTSLQSLNL 314

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
             N +  +P  I  L  L +LDL  N  L IP  I G     E
Sbjct: 315 RSNNIQELPPEIRQLPNLKKLDLRSNP-LPIPPEILGSKEWYE 356


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 165/371 (44%), Gaps = 39/371 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI-- 274

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P EI + 
Sbjct: 275 --------------------------EQLQNL--------KSLDLRSNQLTIFPKEIGQL 300

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  LDL  N +  LP  +    +LQTL L  N++   P  I   L +L  L L+NN L
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI-GQLQNLQELFLNNNQL 359

Query: 440 RQVPSDGFKDI 450
                  F++ 
Sbjct: 360 SSQEKKEFENF 370



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 294 PKEIGQLKNLQVLDLGSNQLTTL 316



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 273

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 343



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 43/370 (11%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +  S    +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    
Sbjct: 31  ESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE- 89

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  
Sbjct: 90  IGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPK 149

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++ 
Sbjct: 150 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 209

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L+ N L TL         P  + +L++              +DL  ++ +L++ 
Sbjct: 210 NLQSLDLSTNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI- 246

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                        +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +
Sbjct: 247 -------------LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 293

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P  I   L +L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +L
Sbjct: 294 PKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQ--EIGQLQNL 349

Query: 478 QELYLRRMQL 487
           QEL+L   QL
Sbjct: 350 QELFLNNNQL 359



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  LDLS N ++ LP E+
Sbjct: 204 EIGQLQNLQSLDLSTNRLTTLPQEI 228


>gi|357115982|ref|XP_003559764.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710-like [Brachypodium distachyon]
          Length = 1232

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 247/517 (47%), Gaps = 58/517 (11%)

Query: 45  VDLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNS 102
           V L+ L+L+ N +  ++  ++  +  L  LN S N L   +P  IG L  L  LD+S N+
Sbjct: 81  VKLRFLVLSDNQVSGEIPREIGKMSHLVELNFSCNHLVGPIPPEIGHLKHLSILDLSKNN 140

Query: 103 IMK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADC 159
           +   IP  +   T L       NQL   +P  LG  +NL     SNN IT  +P +L++ 
Sbjct: 141 LSNSIPTNMSDLTKLTILYLDQNQLSGYIPIGLGYLMNLEYLALSNNFITGPIPTNLSNL 200

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNR 218
           + +  L +  N+L+      +     +  L  S+N L G +P ++G+L++L  L LH+N+
Sbjct: 201 TNLVGLYIWHNRLSGHIPQELGHLVNIKYLELSENTLTGPIPNSLGNLTKLTWLFLHRNQ 260

Query: 219 ILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ-- 274
           +   +P  +     L    +  N L+  +P+  G LSKL TL L+ N+L  +        
Sbjct: 261 LSGDLPQEVGYLADLERLMLHTNNLTGSIPSIFGNLSKLITLHLYGNKLHGWIPREVGYL 320

Query: 275 LRLSVLDLSNNSLSGL-PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           + L  L L NN+L+ + P  +G +T L KL L  N         + GP P  L YL    
Sbjct: 321 VNLEELALENNTLTNIIPYSLGNLTKLTKLYLYNNQ--------ICGPIPHELGYL---- 368

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-IPSEIWEAGEITKLDLSRNSI 392
                                  +  +E++LE   L+  IP  +    ++T L+L  N +
Sbjct: 369 -----------------------INLEEMALENNTLTGSIPYTLGNLTKLTTLNLFENQL 405

Query: 393 -QELPPELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKD 449
            Q++P EL +  +L+TL++  N +    PD+ L +L+ LS L L +N L   +P+D    
Sbjct: 406 SQDIPRELGNLVNLETLMIYGNTLTGSIPDS-LGNLTKLSTLYLHHNQLSGHLPND-LGT 463

Query: 450 IPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLS 506
           +  L+ L LSYN  I S+P      +L  L  LYL   QL  + P ++ +L  L  L LS
Sbjct: 464 LINLEDLRLSYNRLIGSIPN--ILGNLTKLTTLYLVSNQLSASIPKELGKLANLEGLILS 521

Query: 507 QNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +N+L  SIP    NLT L  L L  N +S   P+ +S
Sbjct: 522 ENTLSGSIPNSLGNLTKLITLYLVQNQLSGSIPQEIS 558



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 254/570 (44%), Gaps = 76/570 (13%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI 103
           DL++L+L  NN+   +     NL  L  L++  NKL   +P  +G L  L+ L +  N++
Sbjct: 274 DLERLMLHTNNLTGSIPSIFGNLSKLITLHLYGNKLHGWIPREVGYLVNLEELALENNTL 333

Query: 104 MKI-PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
             I P  +G+ T L K    +NQ+   +P  LG  +NL +    NN +T S+P  L + +
Sbjct: 334 TNIIPYSLGNLTKLTKLYLYNNQICGPIPHELGYLINLEEMALENNTLTGSIPYTLGNLT 393

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNR- 218
           K++ L++  N+L+      + +   L  L+   N L G +P+++G+L++L  L LH N+ 
Sbjct: 394 KLTTLNLFENQLSQDIPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLSTLYLHHNQL 453

Query: 219 ------------------------ILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
                                   I SIP+ +     L   Y+ +N LSA +P ELGKL+
Sbjct: 454 SGHLPNDLGTLINLEDLRLSYNRLIGSIPNILGNLTKLTTLYLVSNQLSASIPKELGKLA 513

Query: 254 KLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
            L  L L  N L      +     +L  L L  N LSG +P EI K+ +L +L L+ N L
Sbjct: 514 NLEGLILSENTLSGSIPNSLGNLTKLITLYLVQNQLSGSIPQEISKLMSLVELELSYNNL 573

Query: 311 R----------------TLRSSLVNGPTPALL----KYLRSRLPENE---DSEASTTKED 347
                            T   + + GP P+ L      +R RL  N+   D        D
Sbjct: 574 SGVLPSGLCAGGLLKNFTAAGNNLTGPLPSSLLSCTSLVRLRLDGNQLEGDIGEMEVYPD 633

Query: 348 LITMATRLSVTSKELSLEGMNLS--------------AIPSEIWEAGEITKLDLSRNSIQ 393
           L+ +    +  S +LS      S               IP  I +  ++ KLD+S N ++
Sbjct: 634 LVYIDISSNKLSGQLSHRWGECSKLTLLRASKNNIAGGIPPSIGKLSDLRKLDVSSNKLE 693

Query: 394 -ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
            ++P E+ + + L  L+L  N +       + SL++L  L L +N L        +    
Sbjct: 694 GQMPREIGNISMLFKLVLCGNLLHGNIPQEIGSLTNLEHLDLSSNNLTGPIPRSIEHCLK 753

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQNSL 510
           LQ L L++N            L  LQ L      L +   P+ +  LQ+L  L+LS N+L
Sbjct: 754 LQFLKLNHNHLDGTIPMELGMLVDLQILVDLGDNLFDGTIPSQLSGLQKLEALNLSHNAL 813

Query: 511 Q-SIPEGFKNLTSLTELDLSDNNISALPPE 539
             SIP  F+++ SL  +D+S N +    P+
Sbjct: 814 SGSIPPSFQSMASLISMDVSYNKLEGPVPQ 843



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 253/542 (46%), Gaps = 67/542 (12%)

Query: 45  VDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNS 102
           V+++ L L+ N +   +   L NL  LT L +  N+LS +LP  +G L  L+ L +  N+
Sbjct: 225 VNIKYLELSENTLTGPIPNSLGNLTKLTWLFLHRNQLSGDLPQEVGYLADLERLMLHTNN 284

Query: 103 IM-KIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITSL-PEDLADC 159
           +   IP   G+ + L+      N+L   +P  +G  +NL +    NN +T++ P  L + 
Sbjct: 285 LTGSIPSIFGNLSKLITLHLYGNKLHGWIPREVGYLVNLEELALENNTLTNIIPYSLGNL 344

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNR 218
           +K++KL +  N++     + +     L E+    N L G +P T+G+L++L  L+L +N+
Sbjct: 345 TKLTKLYLYNNQICGPIPHELGYLINLEEMALENNTLTGSIPYTLGNLTKLTTLNLFENQ 404

Query: 219 I-LSIPSSISGCCSLAEFYM-GNNALSALPAELGKLSKLGTLDLHSNQLKEYC------- 269
           +   IP  +    +L    + GN    ++P  LG L+KL TL LH NQL  +        
Sbjct: 405 LSQDIPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLSTLYLHHNQLSGHLPNDLGTL 464

Query: 270 --VEACQL-----------------RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNP 309
             +E  +L                 +L+ L L +N LS  +P E+GK+  L  L+L+ N 
Sbjct: 465 INLEDLRLSYNRLIGSIPNILGNLTKLTTLYLVSNQLSASIPKELGKLANLEGLILSENT 524

Query: 310 LR-TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           L  ++ +SL N     L K +   L +N+ S  S  +E    ++  +S+   ELS    N
Sbjct: 525 LSGSIPNSLGN-----LTKLITLYLVQNQLS-GSIPQE----ISKLMSLVELELSYN--N 572

Query: 369 LSAI-PSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKD-------WP 419
           LS + PS +   G +     + N++   LP  L SC SL  L L  N+++        +P
Sbjct: 573 LSGVLPSGLCAGGLLKNFTAAGNNLTGPLPSSLLSCTSLVRLRLDGNQLEGDIGEMEVYP 632

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           D +   +SS        N L    S  + +   L +L  S N  +    P    L  L++
Sbjct: 633 DLVYIDISS--------NKLSGQLSHRWGECSKLTLLRASKNNIAGGIPPSIGKLSDLRK 684

Query: 480 LYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALP 537
           L +   +L  + P +I  +  L  L L  N L   IP+   +LT+L  LDLS NN++   
Sbjct: 685 LDVSSNKLEGQMPREIGNISMLFKLVLCGNLLHGNIPQEIGSLTNLEHLDLSSNNLTGPI 744

Query: 538 PE 539
           P 
Sbjct: 745 PR 746



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 154/347 (44%), Gaps = 51/347 (14%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIM 104
           L  L L  N +   + +++  L  L  L +S+N LS  LP+ +    +LK+   + N++ 
Sbjct: 539 LITLYLVQNQLSGSIPQEISKLMSLVELELSYNNLSGVLPSGLCAGGLLKNFTAAGNNLT 598

Query: 105 K-IPDEIGSATALVKFDCSSNQLK------------------------ELPSSLGRCLNL 139
             +P  + S T+LV+     NQL+                        +L    G C  L
Sbjct: 599 GPLPSSLLSCTSLVRLRLDGNQLEGDIGEMEVYPDLVYIDISSNKLSGQLSHRWGECSKL 658

Query: 140 SDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           +  +AS NN    +P  +   S + KLDV  NKL       I + +ML +L+   NLL+G
Sbjct: 659 TLLRASKNNIAGGIPPSIGKLSDLRKLDVSSNKLEGQMPREIGNISMLFKLVLCGNLLHG 718

Query: 199 -MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKL 255
            +P+ IGSL+ L  LDL  N +   IP SI  C  L    + +N L   +P ELG L  L
Sbjct: 719 NIPQEIGSLTNLEHLDLSSNNLTGPIPRSIEHCLKLQFLKLNHNHLDGTIPMELGMLVDL 778

Query: 256 GTL-DLHSNQLKEYC---VEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
             L DL  N         +   Q +L  L+LS+N+LSG +PP    M +L  + ++ N L
Sbjct: 779 QILVDLGDNLFDGTIPSQLSGLQ-KLEALNLSHNALSGSIPPSFQSMASLISMDVSYNKL 837

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
                    GP P      +SRL E    E     + L  +   LS+
Sbjct: 838 E--------GPVP------QSRLFEEAPIEWFVHNKQLCGVVKGLSL 870



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 188/421 (44%), Gaps = 58/421 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+    N  + S+P  +    K+  L + GN++       +A+   L  L+ S N
Sbjct: 36  RSLDLSN----NELVGSIPSSIEVLVKLRALLLRGNQIRGSIPPALANLVKLRFLVLSDN 91

Query: 195 LLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPAELGK 251
            ++G +P  IG +S L+ L+   N ++  IP  I     L+   +  N LS ++P  +  
Sbjct: 92  QVSGEIPREIGKMSHLVELNFSCNHLVGPIPPEIGHLKHLSILDLSKNNLSNSIPTNMSD 151

Query: 252 LSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGN 308
           L+KL  L L  NQL  Y        + L  L LSNN ++G +P  +  +T L  L +  N
Sbjct: 152 LTKLTILYLDQNQLSGYIPIGLGYLMNLEYLALSNNFITGPIPTNLSNLTNLVGLYIWHN 211

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L        +G  P  L +L                           V  K L L    
Sbjct: 212 RL--------SGHIPQELGHL---------------------------VNIKYLELSENT 236

Query: 369 LSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           L+  IP+ +    ++T L L RN +  +LP E+   A L+ L+L  N +     +I  +L
Sbjct: 237 LTGPIPNSLGNLTKLTWLFLHRNQLSGDLPQEVGYLADLERLMLHTNNLTGSIPSIFGNL 296

Query: 427 SSLSCLKLDNNPLRQ-VPSD-GFKDIPMLQILDLSYNIASLPENPPFS--SLPHLQELYL 482
           S L  L L  N L   +P + G+    ++ + +L+    +L    P+S  +L  L +LYL
Sbjct: 297 SKLITLHLYGNKLHGWIPREVGY----LVNLEELALENNTLTNIIPYSLGNLTKLTKLYL 352

Query: 483 RRMQL-REAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPE 539
              Q+    P ++  L  L  + L  N+L  SIP    NLT LT L+L +N +S  +P E
Sbjct: 353 YNNQICGPIPHELGYLINLEEMALENNTLTGSIPYTLGNLTKLTTLNLFENQLSQDIPRE 412

Query: 540 L 540
           L
Sbjct: 413 L 413



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 118/269 (43%), Gaps = 39/269 (14%)

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L  LDLSNN L G +P  I  +  LR LLL GN +R           PAL   ++ R   
Sbjct: 35  LRSLDLSNNELVGSIPSSIEVLVKLRALLLRGNQIR-------GSIPPALANLVKLRFLV 87

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQE 394
             D++ S                             IP EI +   + +L+ S N  +  
Sbjct: 88  LSDNQVS---------------------------GEIPREIGKMSHLVELNFSCNHLVGP 120

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +PPE+     L  L LS+N + +     ++ L+ L+ L LD N L      G   +  L+
Sbjct: 121 IPPEIGHLKHLSILDLSKNNLSNSIPTNMSDLTKLTILYLDQNQLSGYIPIGLGYLMNLE 180

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS- 512
            L LS N  + P     S+L +L  LY+   +L    P ++  L  ++ L+LS+N+L   
Sbjct: 181 YLALSNNFITGPIPTNLSNLTNLVGLYIWHNRLSGHIPQELGHLVNIKYLELSENTLTGP 240

Query: 513 IPEGFKNLTSLTELDLSDNNISA-LPPEL 540
           IP    NLT LT L L  N +S  LP E+
Sbjct: 241 IPNSLGNLTKLTWLFLHRNQLSGDLPQEV 269


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 232/519 (44%), Gaps = 44/519 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL DVP EV+            +E   L+ L+   N I +L   L     L  L
Sbjct: 19  LDYSHHSLTDVPTEVF-----------VYERT-LETLLCQSNRITELPRQLFMCHGLKYL 66

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L  +P AI  L  L+ L++S N++  IPD + S   L+  D S N L++LP ++
Sbjct: 67  DLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETI 126

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + + D   ++  +  LP +    + +  L++  N L +L  +L  S T L  L   +
Sbjct: 127 TNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRS-TDLLRLDIGQ 185

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N     PE IG  S+L  L +  N    IP+ I    +L      NN +  L  E+G  S
Sbjct: 186 NEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPEIGYCS 245

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L  N L +      QL  L+ L L NN L  +P  IG++  L +L+L  N +  
Sbjct: 246 RLEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDK 305

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L SS+       LL+ L+     N D          I    +LSV    LS+    L+ I
Sbjct: 306 LPSSI------GLLRKLQYL---NVDENMLRVIPPEIGSCAKLSV----LSVRSNKLTKI 352

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI     +  L+L RNS+  LP  L +C +L  L LS N+ K      L  + S    
Sbjct: 353 PPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLSENQSKP-----LVPMHS---- 403

Query: 433 KLDNNPLRQVPSDG-FKDIPM----LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
           ++D N   QV +   F  +P+    +++ ++     S+P +  F  +    +   +  QL
Sbjct: 404 EVDPNTYEQVLTCFLFPQVPLTPIDIKLENVKSEAQSVPRHISFVDMKPAVKTNEKPGQL 463

Query: 488 REAPTDI---LRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           R APT     LR       ++ ++  Q +P   +N   +
Sbjct: 464 RRAPTPYPKELRAMAKHARNIHKDGTQDVPPPMQNAVHI 502



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 184/397 (46%), Gaps = 22/397 (5%)

Query: 152 LPEDLADCSK-----MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           +P D   C +     + +LD   + LT +   +      L  L+   N +  +P  +   
Sbjct: 1   MPFDFLCCVRPGVEDIVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMC 60

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  LDL  N + +IP++IS   +L    +  N L+++P  +  L  L  LDL  N L+
Sbjct: 61  HGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLE 120

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +       L  +  L L++  L  LP   G++  LR L L  N L  L  SL        
Sbjct: 121 KLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRS----- 175

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
              LR  + +NE  +      ++I   ++L    KEL ++  + + IP+ I     +  L
Sbjct: 176 TDLLRLDIGQNEFQQFP----EVIGRFSKL----KELWIDSNSFTIIPAVIKPLDNLIHL 227

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           + S N I+EL PE+  C+ L+ L LS N +   PD I   LS+L+ LKLDNN L  +P  
Sbjct: 228 EASNNMIEELAPEIGYCSRLEDLTLSVNSLTQLPDTI-GQLSNLTALKLDNNRLYSIPES 286

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             +   + +++ +S  I  LP +     L  LQ L +    LR  P +I    +L +L +
Sbjct: 287 IGQLKNLEELMLMSNYIDKLPSS--IGLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSV 344

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
             N L  IP    +LTSL  L+L  N++S LP  L++
Sbjct: 345 RSNKLTKIPPEIGHLTSLRVLNLVRNSLSYLPQSLLN 381



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 455 ILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           I++L Y+  SL + P   F     L+ L  +  ++ E P  +     L+ LDLS N LQ+
Sbjct: 16  IVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQA 75

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           IP    +L +L  L+LS N ++++P  + S+
Sbjct: 76  IPTAISSLVNLQHLNLSRNTLASIPDNMKSL 106


>gi|301780096|ref|XP_002925464.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Ailuropoda melanoleuca]
          Length = 869

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 232/502 (46%), Gaps = 48/502 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++++L   +N IE     L +L  L +L+++ NKL  +P  +  L  LK LD+ +N +  
Sbjct: 244 NIRQLFFNNNYIENFPSGLESLGNLEILSLAKNKLRHIPDTLSSLKNLKVLDLEYNQLTI 303

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L+    + N +  LP  +    NL      +N +T L  ++    KM +L
Sbjct: 304 FPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDHNKLTFLAVEIFQLLKMKEL 363

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKL V+S+  I ++  L  LI  KNLL  +PE I     L  L L  N++  +P +
Sbjct: 364 QLTDNKLQVISHK-IENFKELKILILDKNLLKEIPEKISHCVMLECLSLSYNKLTGLPKN 422

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLS 283
           I    +L + ++  N +  +P ++ +L+ +  L+   N + +  +E   C+ +++ ++LS
Sbjct: 423 IYKLKNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNIITDVPIEVKNCK-KITKVELS 481

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N +   P  +  + +L  L   GN +                    S +P     + S 
Sbjct: 482 HNKIMYFPVGLCALDSLYYLNFNGNYI--------------------SEIP----VDISF 517

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           +K+ L             L L    L      +     +  LDL  N I+++PP +S+  
Sbjct: 518 SKQLL------------NLELNKNKLLIFSEHLCSLINLEYLDLGENQIRKIPPSISNMV 565

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
           SL  LIL  NK + +P  + T L +L  L L  N ++ +PSD   ++  +Q L+++ N  
Sbjct: 566 SLHALILCCNKFEAFPIEVCT-LENLQVLDLSINQIQTIPSD-ICNLKRIQKLNIASNQF 623

Query: 463 ASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
              P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ IP     
Sbjct: 624 IYFP--TELCQLQSLEELNISQINGRKLTRLPEELSNMTQLKRLDISNNAIREIPRNIGE 681

Query: 520 LTSLTELDLSDNNISALPPELV 541
           L SL  L+  +N IS LPP  +
Sbjct: 682 LRSLVSLNAHNNQISYLPPSFL 703



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 39/416 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++ + +++L L  N ++ +   + N   L +L +  N L E+P  I    ML+ L +S+N
Sbjct: 355 FQLLKMKELQLTDNKLQVISHKIENFKELKILILDKNLLKEIPEKISHCVMLECLSLSYN 414

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P  I     L K   + N +  +P  + R  N+   + S N IT +P ++ +C K
Sbjct: 415 KLTGLPKNIYKLKNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNIITDVPIEVKNCKK 474

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++K+++  NK+      L A    L  L  + N ++ +P  I    +L+ L+L++N++L 
Sbjct: 475 ITKVELSHNKIMYFPVGLCA-LDSLYYLNFNGNYISEIPVDISFSKQLLNLELNKNKLLI 533

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
               +    +L    +G N +  +P  +  +  L  L L  N+ + + +E C L  L VL
Sbjct: 534 FSEHLCSLINLEYLDLGENQIRKIPPSISNMVSLHALILCCNKFEAFPIEVCTLENLQVL 593

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP-------------LRTLRSSLVNGPTPALLK 327
           DLS N +  +P +I  +  ++KL +  N              L  L  S +NG       
Sbjct: 594 DLSINQIQTIPSDICNLKRIQKLNIASNQFIYFPTELCQLQSLEELNISQINGRK----- 648

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RLPE    E S      +T   RL +++         +  IP  I E   +  L+ 
Sbjct: 649 --LTRLPE----ELSN-----MTQLKRLDISNNA-------IREIPRNIGELRSLVSLNA 690

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
             N I  LPP       LQ L LS N +   P+ I  +L SL  +  D+NPL + P
Sbjct: 691 HNNQISYLPPSFLCLNDLQQLNLSGNNLTVLPNGI-HNLFSLKEINFDDNPLLRPP 745



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 218/534 (40%), Gaps = 103/534 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK-EDLRNLPLLT 71
           ++N+  + L++ P ++ K         K+ + + L K     N I+  K  D  +L  L 
Sbjct: 154 TVNIKAKGLQEFPKDILK--------IKYVKYLYLDK-----NQIKSFKGADSGDLLGLE 200

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS LP  I  L  L+ L+VS N I  I  EI                    S
Sbjct: 201 ILSLQENGLSSLPPEIQLLRNLRILNVSHNQISHIAKEI--------------------S 240

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            LG   N+     +NN I + P  L     +  L +  NKL  + + L +S   L  L  
Sbjct: 241 QLG---NIRQLFFNNNYIENFPSGLESLGNLEILSLAKNKLRHIPDTL-SSLKNLKVLDL 296

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L   P+ +  L +LI L L  N I S+P  I    +L +  + +N L+ L  E+ +
Sbjct: 297 EYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDHNKLTFLAVEIFQ 356

Query: 252 LSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L K+  L L  N+L+   + +E  +  L +L L  N L  +P +I     L  L L+ N 
Sbjct: 357 LLKMKELQLTDNKLQVISHKIENFK-ELKILILDKNLLKEIPEKISHCVMLECLSLSYNK 415

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L  L  ++        LK LR                              +L +   N+
Sbjct: 416 LTGLPKNIYK------LKNLR------------------------------KLHVNRNNI 439

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
             IP +I     +  L+ S N I ++P E+ +C  +  + LS NKI  +P   L +L SL
Sbjct: 440 VRIPEDISRLNNMFILEFSGNIITDVPIEVKNCKKITKVELSHNKIMYFPVG-LCALDSL 498

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L  + N + ++P            +D+S++               L  L L + +L  
Sbjct: 499 YYLNFNGNYISEIP------------VDISFS-------------KQLLNLELNKNKLLI 533

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               +  L  L  LDL +N ++ IP    N+ SL  L L  N   A P E+ ++
Sbjct: 534 FSEHLCSLINLEYLDLGENQIRKIPPSISNMVSLHALILCCNKFEAFPIEVCTL 587



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I K+   + N+  L  L +  NK    P  +  L  L+ LD+S N I 
Sbjct: 542 INLEYLDLGENQIRKIPPSISNMVSLHALILCCNKFEAFPIEVCTLENLQVLDLSINQIQ 601

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP +I +   + K + +SNQ    P+ L +  +L +   S      +T LPE+L++ ++
Sbjct: 602 TIPSDICNLKRIQKLNIASNQFIYFPTELCQLQSLEELNISQINGRKLTRLPEELSNMTQ 661

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +LD+                        S N +  +P  IG L  L+ L+ H N+I  
Sbjct: 662 LKRLDI------------------------SNNAIREIPRNIGELRSLVSLNAHNNQISY 697

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           +P S      L +  +  N L+ LP  +  L  L  ++   N L    +E C+
Sbjct: 698 LPPSFLCLNDLQQLNLSGNNLTVLPNGIHNLFSLKEINFDDNPLLRPPMEICK 750


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 181/394 (45%), Gaps = 40/394 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT L N  I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE-IEQLKNLQVLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ I  L  L  L LH NR+ ++   I    +L    + NN L+ LP E+ +
Sbjct: 170 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQ 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L  NQ   +  E  QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L
Sbjct: 230 LKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 289

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         P  ++ L++                            K L L    L+
Sbjct: 290 ITL---------PKEIEQLKN---------------------------LKSLDLSYNQLT 313

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P E+ +   +  LDL  N ++ LP E+    +LQTL LS N++   P  I   L +L 
Sbjct: 314 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEI-GQLQNLL 372

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
            L L  N L  +P++  + +  LQ L L+ N  S
Sbjct: 373 WLSLVYNQLTTLPNE-IEQLKNLQTLYLNNNQFS 405



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L  +
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +P+EI     L   D  S
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT L N  I   
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQL 230

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L   Y+ +N L 
Sbjct: 231 KNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI 290

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP EI ++  L+ 
Sbjct: 291 TLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQT 350

Query: 303 LLLTGNPLRTL 313
           L L+ N L TL
Sbjct: 351 LFLSNNQLTTL 361



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 172/351 (49%), Gaps = 19/351 (5%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 55  SRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 114

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL SNQL     E  QL+ L +L L +N L+ LP EI ++  L+ L L  N L
Sbjct: 115 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQL 174

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL YL S    N  +  S   E L  +        K L L    L+
Sbjct: 175 TVLPQEIEQLKNLQLL-YLHS----NRLTTLSKDIEQLQNL--------KSLDLSNNQLT 221

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P+EI +   +  L LS N     P E+    +L+ L L+ N+I   P+ I   L  L 
Sbjct: 222 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQ 280

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L +N L  +P +  + +  L+ LDLSYN +  LP+      L +LQ L LR  QL+ 
Sbjct: 281 YLYLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKT 337

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L+ L+ L LS N L ++P+    L +L  L L  N ++ LP E+
Sbjct: 338 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEI 388



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 148 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 206

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 207 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 266

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 267 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL----------- 315

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 316 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 362

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+G+L  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 363 QEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 406



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 212 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 271

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 272 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 331

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T+LP+++     +  L +  N+LT L N
Sbjct: 332 NNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPN 386



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +++LDLS   + +LP       L +LQ LYL   QL   P +I +L+ L++L L  N L 
Sbjct: 49  VRVLDLSRQELKTLP--IEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 106

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++P   + L +L  LDL  N ++ LP E+
Sbjct: 107 TLPNEIEQLKNLQVLDLGSNQLTVLPQEI 135


>gi|307205957|gb|EFN84083.1| Protein LAP2 [Harpegnathos saltator]
          Length = 1018

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 201/435 (46%), Gaps = 57/435 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++ +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LQLNHCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N++S LP AI  L  L+ LD+S NSI ++PD I    +L   D S N  +  P ++
Sbjct: 70  SLSDNEVSTLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N +  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNMMTLPKSM-SRLVNLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  IP +I     L  F    NA+  LP E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  ++L SN++ E     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DISIMNLSSNEMYELPDTLCYLRTVVTLKIDDNQLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L SS+       LL+ L                                L+ +   L A+
Sbjct: 309 LPSSI------GLLRKLHC------------------------------LNADNNYLRAL 332

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI     ++ L L  N++  +PPEL   +SL+ L L  N IK  P ++L +LS+L  L
Sbjct: 333 PAEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSML-NLSNLKAL 391

Query: 433 KLDNN------PLRQ 441
            L +N      PL+Q
Sbjct: 392 WLSDNQSQPLVPLQQ 406



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 173/434 (39%), Gaps = 108/434 (24%)

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD       L K    +N++K+LP  L +C  L     S+N +++LP  +A    +  LD
Sbjct: 34  PDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVSTLPPAIASLINLEYLD 93

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                        SKN +  +P++I     L  +D+  N     P +I
Sbjct: 94  L------------------------SKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI 129

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           +    L E Y+ +  +  LPA  G+LS L TL+                      L  N+
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLE----------------------LRENN 167

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +  LP  + ++  L++L +  N                      + LPE           
Sbjct: 168 MMTLPKSMSRLVNLQRLDIGNNDF--------------------TELPE--------VVG 199

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           DLI +         EL ++G ++  IP  I +   +   D + N+I  LP E+     + 
Sbjct: 200 DLINLT--------ELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDIS 251

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            + LS N++ + PD  L  L ++  LK+D+N L  +P+D                     
Sbjct: 252 IMNLSSNEMYELPDT-LCYLRTVVTLKIDDNQLNALPND--------------------- 289

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
                  +  L+EL + +  L   P+ I  L++L  L+   N L+++P    + T+L+ L
Sbjct: 290 ----IGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNADNNYLRALPAEIGSCTALSLL 345

Query: 527 DLSDNNISALPPEL 540
            L  NN++ +PPEL
Sbjct: 346 SLRSNNLTRVPPEL 359



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 455 ILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           I +L  N  +L + PP  F     L++LYL   ++++ P  + +  +LR+L LS N + +
Sbjct: 19  ICELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVST 78

Query: 513 IPEGFKNLTSLTELDLSDNNISALP 537
           +P    +L +L  LDLS N+I  LP
Sbjct: 79  LPPAIASLINLEYLDLSKNSIKELP 103



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L+L++  L  VP D F     L+ L L  N I  LP   P      L+ L L   ++   
Sbjct: 22  LQLNHCNLYDVPPDVFIYERTLEKLYLDANRIKDLPR--PLFQCHELRVLSLSDNEVSTL 79

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P  I  L  L  LDLS+NS++ +P+  K   SL  +D+S N     P  +  +
Sbjct: 80  PPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAITHI 132


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 153/275 (55%), Gaps = 8/275 (2%)

Query: 47  LQKLILAHNNIEKLKE---DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           LQ L +++N ++ L      LRNL +L + ++S   ++ELP  IG L +L+ L++  N +
Sbjct: 116 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDIS---IAELPEEIGSLQLLEKLELRDNCL 172

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD       L   D  +N+ +EL   +G+   LS+    +N + SLP++L +   + 
Sbjct: 173 KSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQ 232

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L++ 
Sbjct: 233 QLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVT 291

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDL 282
            +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L L
Sbjct: 292 PTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSL 351

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 352 RENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 386



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 202/442 (45%), Gaps = 80/442 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I    R +  ++  +  L  VP++V +NF              L++  L  N I++L + 
Sbjct: 8   IGPCGRHTDHIDRRHSKLEQVPDDVIRNFRT------------LEECRLDANQIKELPKH 55

Query: 64  --------LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
                      +  + +L +S N+L+ LP  IG    L  LD+S N I ++P  I    +
Sbjct: 56  RASIXXXXFFRMKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDS 115

Query: 116 LVKFDCSSNQLKELPSSLGR-------CLN----------------LSDFKASNNCITSL 152
           L   D S+N L+ LP+   +       CLN                L   +  +NC+ S+
Sbjct: 116 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSI 175

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+  AD   +  LD+  N+   LS  +I   + L+EL    N L  +P+ +G+L  L +L
Sbjct: 176 PDSFADLIHLEFLDLGANEFQELS-PVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQL 234

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL +N I ++P SISG  SL++  +  N+++ LP  LG L KL  L L+ N+L       
Sbjct: 235 DLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRL------- 287

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+V            P IG  ++L++L LT N L  L SS+ N     L+      
Sbjct: 288 ----LTVT-----------PTIGNCSSLQELYLTENFLSKLPSSIGN-----LVSMFHLN 327

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           + +N+ +E  +     I   T L++    LSL   NL  +P EI     +  LD+S N +
Sbjct: 328 VDQNQLTELPSE----IGQCTSLNI----LSLRENNLHRLPDEIGNCTRLRVLDVSGNRL 379

Query: 393 QELPPELSSCASLQTLILSRNK 414
             LP  LS C SL  L LS+N+
Sbjct: 380 DRLPFSLSRC-SLTALWLSQNQ 400



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 170/352 (48%), Gaps = 44/352 (12%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P  IGS S L+ LD+ +N I  +P+SI  C SL    + NN L +LPA 
Sbjct: 73  LTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNPLQSLPAG 132

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                   CQLR L VL L++ S++ LP EIG +  L KL L  
Sbjct: 133 F-----------------------CQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRD 169

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+++  S  +     L+      L  NE  E S     +I   ++LS    EL ++  
Sbjct: 170 NCLKSIPDSFAD-----LIHLEFLDLGANEFQELSP----VIGQLSQLS----ELWIDDN 216

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L ++P E+   G + +LDLS N I  LP  +S   SL  L LS+N I   P+  L  L 
Sbjct: 217 ELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNG-LGDLD 275

Query: 428 SLSCLKLDNNPLRQV-PSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRM 485
            L  LKL+ N L  V P+ G  +   LQ L L+ N  S LP +    +L  +  L + + 
Sbjct: 276 KLIILKLNQNRLLTVTPTIG--NCSSLQELYLTENFLSKLPSS--IGNLVSMFHLNVDQN 331

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QL E P++I +   L IL L +N+L  +P+   N T L  LD+S N +  LP
Sbjct: 332 QLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLP 383



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 397 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-------GFK 448
           P +  C      I  R+ K++  PD ++ +  +L   +LD N ++++P          F 
Sbjct: 6   PIIGPCGRHTDHIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKHRASIXXXXFF 65

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
            +  +++L LS N +  LP      S  +L EL + R  + E P  I     L+ LD+S 
Sbjct: 66  RMKRIRLLTLSDNELTRLPTG--IGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSN 123

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N LQS+P GF  L +L  L L+D +I+ LP E+ S+
Sbjct: 124 NPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSL 159


>gi|291394839|ref|XP_002713745.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           [Oryctolagus cuniculus]
          Length = 858

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 249/570 (43%), Gaps = 57/570 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           +++L  + L++ P ++ K           N     +G    +   L+ L L  N +  L 
Sbjct: 143 TVHLEAKGLQEFPQDILKIKYVKYLYLEKNQIRTFQGTDPGDLRGLEILSLQENELSSLP 202

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI------------------ 103
            +++ L  L +LNVSHN+++ +P  + +L  ++ L ++ N I                  
Sbjct: 203 PEIQLLHNLRILNVSHNQIAHIPKELSQLGNIRQLFLNNNYIETFLSDLESLGNLEILSL 262

Query: 104 -----MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
                  IPD + S   L       NQL   P SL     L     + N I SLP+++ +
Sbjct: 263 GRNKMRHIPDTLPSLKNLKVLSLEYNQLTIFPKSLCFLPKLISLNLTGNLIESLPKEIRE 322

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              + KL ++ NKLT L+  +   +  + EL  + N L  +   I +   L  L L +N 
Sbjct: 323 LKHLEKLFLDHNKLTFLAVEMFQLFK-IKELQLADNKLELISHKIENFKELRVLILDKNL 381

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + +IP  IS C  L    + +N LS LP  + KL  L  L ++ N + +   +   L ++
Sbjct: 382 LKNIPEKISSCGMLECLSLSDNKLSDLPKTIYKLKNLRKLHVNRNNIVKIVEDISHLNKM 441

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++ +P EI     + K+ L  N +      L    +   L +  + + E  
Sbjct: 442 CSLEFSGNLITDVPIEIKNCRKITKVELNYNKIIYFPEGLCALESLYYLSFSGNYISE-- 499

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                      I +    S     L+L    L      +     +  LDL +N I+++PP
Sbjct: 500 -----------IPVDISFSNQLLHLALNQNKLLIFSEHLCSLINLRYLDLGKNQIKKVPP 548

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
            +S   SL+ LIL  NK + +P  + T L +L  L    N L+ VPS+   ++  +Q L+
Sbjct: 549 SVSKMVSLRVLILYSNKFETFPVELCT-LENLQVLDFSENQLQTVPSE-ICNLKGIQKLN 606

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSI 513
            S N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ I
Sbjct: 607 FSSNQFIYFPVE--LCQLQSLEELNMSQINGRKLTRIPEELSNMTQLKNLDISNNAIREI 664

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P+    L SL  L   +N IS LPP  +S+
Sbjct: 665 PKKMGELRSLVNLYAQNNQISYLPPSFLSL 694



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 249/556 (44%), Gaps = 61/556 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+              +  ++++L L +N IE    DL +L  L +L
Sbjct: 214 LNVSHNQIAHIPKEL-------------SQLGNIRQLFLNNNYIETFLSDLESLGNLEIL 260

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  +P  +  L  LK L + +N +   P  +     L+  + + N ++ LP  +
Sbjct: 261 SLGRNKMRHIPDTLPSLKNLKVLSLEYNQLTIFPKSLCFLPKLISLNLTGNLIESLPKEI 320

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
               +L      +N +T L  ++    K+ +L +  NKL ++S+ +              
Sbjct: 321 RELKHLEKLFLDHNKLTFLAVEMFQLFKIKELQLADNKLELISHKIENFKELRVLILDKN 380

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I+S  ML  L  S N L+ +P+TI  L  L +L +++N I+ I   IS    
Sbjct: 381 LLKNIPEKISSCGMLECLSLSDNKLSDLPKTIYKLKNLRKLHVNRNNIVKIVEDISHLNK 440

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           +       N ++ +P E+    K+  ++L+ N++  +    C L  L  L  S N +S +
Sbjct: 441 MCSLEFSGNLITDVPIEIKNCRKITKVELNYNKIIYFPEGLCALESLYYLSFSGNYISEI 500

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           P +I     L  L L  N L        SL+N      L+YL   L +N+  +   +   
Sbjct: 501 PVDISFSNQLLHLALNQNKLLIFSEHLCSLIN------LRYLD--LGKNQIKKVPPSVSK 552

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           ++++   +  ++K            P E+     +  LD S N +Q +P E+ +   +Q 
Sbjct: 553 MVSLRVLILYSNK--------FETFPVELCTLENLQVLDFSENQLQTVPSEICNLKGIQK 604

Query: 408 LILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           L  S N+   +P  +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I  
Sbjct: 605 LNFSSNQFIYFPVELCQLQSLEELNMSQINGRKLTRIPEE-LSNMTQLKNLDISNNAIRE 663

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +P+      L  L  LY +  Q+   P   L L  L+ L+LS N+L ++P    NL+SL 
Sbjct: 664 IPKK--MGELRSLVNLYAQNNQISYLPPSFLSLNNLQQLNLSGNNLTALPGAICNLSSLR 721

Query: 525 ELDLSDNNISALPPEL 540
           E++  DN +   P E+
Sbjct: 722 EINFDDNPLLRPPMEI 737



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I+K+   +  +  L VL +  NK    P  +  L  L+ LD S N + 
Sbjct: 531 INLRYLDLGKNQIKKVPPSVSKMVSLRVLILYSNKFETFPVELCTLENLQVLDFSENQLQ 590

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            +P EI +   + K + SSNQ    P  L +  +L +   S      +T +PE+L++ ++
Sbjct: 591 TVPSEICNLKGIQKLNFSSNQFIYFPVELCQLQSLEELNMSQINGRKLTRIPEELSNMTQ 650

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+                        S N +  +P+ +G L  L+ L    N+I  
Sbjct: 651 LKNLDI------------------------SNNAIREIPKKMGELRSLVNLYAQNNQISY 686

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           +P S     +L +  +  N L+ALP  +  LS L  ++   N L    +E C+
Sbjct: 687 LPPSFLSLNNLQQLNLSGNNLTALPGAICNLSSLREINFDDNPLLRPPMEICK 739


>gi|3894387|gb|AAC78593.1| Hcr2-0B [Solanum lycopersicum]
          Length = 944

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 238/491 (48%), Gaps = 33/491 (6%)

Query: 67  LPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSSN 124
           LP L  L++S+N +S  +P  IG L  L  LD++ N I   IP +IGS   L      +N
Sbjct: 94  LPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNN 153

Query: 125 QLKE-LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            L   +P  +G   +L+      N ++ S+P  L + + +S L +  N+L+      I  
Sbjct: 154 HLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGY 213

Query: 183 WTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNN 240
              LT+L    N L+G +P ++G+L+ L  L L+ N++  SIP  I    SL    +G N
Sbjct: 214 LRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTYLDLGEN 273

Query: 241 ALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGK 296
           AL+  +PA LG L+ L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G 
Sbjct: 274 ALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGN 333

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMA 352
           +  L +L L  N L        +G  P  + YLRS     L EN  + +       +   
Sbjct: 334 LNNLSRLDLYNNKL--------SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNL 385

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILS 411
           +RL + + +LS       +IP EI     +TKL L  N +   +P  L +  +L  L L 
Sbjct: 386 SRLDLYNNKLS------GSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGNLNNLFMLYLY 439

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF 471
            N++       +  LSSL+ L L NN L  +    F ++  LQ L L+ N   + E P F
Sbjct: 440 NNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDN-NLIGEIPSF 498

Query: 472 -SSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDL 528
             +L  L+ LY+ R  L+ + P  +  +  L +L +S NS    +P    NLTSL  LD 
Sbjct: 499 VCNLTSLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDF 558

Query: 529 SDNNISALPPE 539
             NN+    P+
Sbjct: 559 GRNNLEGAIPQ 569



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 167/575 (29%), Positives = 258/575 (44%), Gaps = 97/575 (16%)

Query: 64  LRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDC 121
           L NL  L+ L + +N+LS  +P  IG L  L  LD+  N++   IP  +G+   L + D 
Sbjct: 235 LGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDL 294

Query: 122 SSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
            +N+L   +P  +G   +L+      N +  S+P  L + + +S+LD+  NKL+      
Sbjct: 295 YNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEE 354

Query: 180 IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYM 237
           I     LT L   +N LNG +P ++G+L+ L RLDL+ N++  SIP  I    SL +  +
Sbjct: 355 IGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTKLSL 414

Query: 238 GNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGL-PPE 293
           GNN LS  +PA LG L+ L  L L++NQL     E       L+ L L NNSL+GL P  
Sbjct: 415 GNNFLSGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPAS 474

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
            G M  L+ L L  N L     S V   T   L Y+     + +  +      DL+ ++ 
Sbjct: 475 FGNMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPRNNLKGKVPQCLGNISDLLVLSM 534

Query: 354 RLSVTSKEL------------------SLEGM------NLSAI--------------PSE 375
             +  S EL                  +LEG       N+S++              P+ 
Sbjct: 535 SSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQCFGNISSLQVFDMQNNKLSGTLPTN 594

Query: 376 IWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 +  L+L  N ++ E+P  L +C  LQ L L  N++ D     L +L  L  L+L
Sbjct: 595 FSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRL 654

Query: 435 DNNPLRQ-VPSDGFKDI-PMLQILDLSYNIASLPENPPFSSLPHLQ-------------- 478
            +N L   + S G + + P L+I+DLS N  S  ++ P S   HL+              
Sbjct: 655 TSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFS--QDLPTSLFEHLKGMRTVDKTMEVPSY 712

Query: 479 ELY----------------LRRMQLR------------EAPTDILRLQQLRILDLSQNSL 510
           E Y                +R + L               P+ +  L  +R+L++S N+L
Sbjct: 713 ERYYDDSVVVVTKGLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNAL 772

Query: 511 QS-IPEGFKNLTSLTELDLSDNNISA-LPPELVSV 543
           Q  IP    +L+ +  LDLS N +S  +P +L S+
Sbjct: 773 QGYIPSSLGSLSRVESLDLSFNQLSGEIPQQLASL 807



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 249/559 (44%), Gaps = 82/559 (14%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L++NNI   +  ++ NL  L  L+++ N++S  +P  IG L  L+ + + FN+ +
Sbjct: 97  LENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRI-FNNHL 155

Query: 105 K--IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG   +L K     N L   +P+SLG   NLS  F   N     +PE++    
Sbjct: 156 NGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLR 215

Query: 161 KMSKLDVEGNKLT----------------VLSNNL--------IASWTMLTELIASKNLL 196
            ++KL ++ N L+                 L NN         I     LT L   +N L
Sbjct: 216 SLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTYLDLGENAL 275

Query: 197 NG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           NG +P ++G+L+ L RLDL+ N++  SIP  I    SL    +G NAL+  +PA LG L+
Sbjct: 276 NGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLN 335

Query: 254 KLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
            L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G +  L +L L  N L
Sbjct: 336 NLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKL 395

Query: 311 RTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                   +G  P  + YLRS  +L    +  + +    L  +     +      L G  
Sbjct: 396 --------SGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGNLNNLFMLYLYNNQLSG-- 445

Query: 369 LSAIPSEIWEAGEITKLDLSRNS-------------------------IQELPPELSSCA 403
             +IP EI     +T L L  NS                         I E+P  + +  
Sbjct: 446 --SIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLT 503

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI- 462
           SL+ L + RN +K      L ++S L  L + +N           ++  L+ILD   N  
Sbjct: 504 SLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNL 563

Query: 463 -ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKN 519
             ++P+   F ++  LQ   ++  +L    PT+      L  L+L  N L+  IP    N
Sbjct: 564 EGAIPQ--CFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDN 621

Query: 520 LTSLTELDLSDNNISALPP 538
              L  LDL DN ++   P
Sbjct: 622 CKKLQVLDLGDNQLNDTFP 640



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 210/464 (45%), Gaps = 70/464 (15%)

Query: 90  LHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNN 147
           L  L++LD+S N+I   IP EIG+ T LV  D ++NQ+   +P  +G    L   +  NN
Sbjct: 94  LPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNN 153

Query: 148 CITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGS 205
            +   +PE++     ++KL +  N L+      + + T L+ L   +N L+G +PE IG 
Sbjct: 154 HLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGY 213

Query: 206 LSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSN 263
           L  L +L L  N +  SIP+S+    +L+  Y+ NN LS  +P E+G L  L  LDL  N
Sbjct: 214 LRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTYLDLGEN 273

Query: 264 QLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            L      +      LS LDL NN LSG +P EIG + +L  L L  N L        NG
Sbjct: 274 ALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENAL--------NG 325

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
             PA L  L +                     +RL + + +LS       +IP EI    
Sbjct: 326 SIPASLGNLNN--------------------LSRLDLYNNKLS------GSIPEEIGYLR 359

Query: 381 EITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            +T LDL  N++   +P  L +  +L  L L  NK+       +  L SL+ L L NN L
Sbjct: 360 SLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTKLSLGNNFL 419

Query: 440 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQ 498
                                   S+P +    +L +L  LYL   QL  + P +I  L 
Sbjct: 420 S----------------------GSIPAS--LGNLNNLFMLYLYNNQLSGSIPEEIGYLS 455

Query: 499 QLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPPELV 541
            L  L L  NSL   IP  F N+ +L  L L+DNN+    P  V
Sbjct: 456 SLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFV 499



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 212/461 (45%), Gaps = 43/461 (9%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L +L L +N +   + E++  L  LT L++ +N LS  +PA++G L+ L  L +  N +
Sbjct: 384 NLSRLDLYNNKLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGNLNNLFMLYLYNNQL 443

Query: 104 -MKIPDEIGSATALVKFDCSSNQLKEL-PSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG  ++L      +N L  L P+S G   NL   F   NN I  +P  + + +
Sbjct: 444 SGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLT 503

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  N L       + + + L  L  S N  +G +P +I +L+ L  LD  +N +
Sbjct: 504 SLELLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNL 563

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQ 274
             +IP       SL  F M NN LS  LP        L +L+LH N+L++   + ++ C+
Sbjct: 564 EGAIPQCFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCK 623

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSR 332
            +L VLDL +N L+   P  +G +  LR L LT N L   +RSS      P L     SR
Sbjct: 624 -KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIMFPDLRIIDLSR 682

Query: 333 LPENEDSEASTTKEDLITMAT----------------RLSVTSKELSLEGMNLSAIPSEI 376
              ++D   S   E L  M T                 + V +K L LE + + ++    
Sbjct: 683 NAFSQDLPTSLF-EHLKGMRTVDKTMEVPSYERYYDDSVVVVTKGLELEIVRILSL---- 737

Query: 377 WEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
                 T +DLS N  +  +P  L    +++ L +S N ++ +  + L SLS +  L L 
Sbjct: 738 -----YTVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSRVESLDLS 792

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSL 474
            N L          +  L+ L+LS+N     +P+ P F + 
Sbjct: 793 FNQLSGEIPQQLASLTFLEFLNLSHNYLQGCIPQGPQFRTF 833


>gi|440802431|gb|ELR23360.1| protein phosphatase 2C domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 895

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 216/496 (43%), Gaps = 45/496 (9%)

Query: 72  VLNVSHNKLSEL-PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           VL+ S  +L E  P  I     LK L +  N +  IP EI   T L   D   N++KE P
Sbjct: 125 VLDRSKKELKEWDPVEILGKKWLKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWP 184

Query: 131 SSLGRCLNLSDFKASNNCITSLP--EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           ++L     L++   + N + S P  +D+A  + + KLD+  N L      L  S   L +
Sbjct: 185 TALCSVTTLAELLLAGNRVRSFPPADDMAKLAALKKLDLSQNGLREFPEAL-CSLPALAD 243

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N L G+   IG LS L RL +  N + S+P  +     L E  + +N +++LP  
Sbjct: 244 LALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSLPEELCDLEYLQELCIADNQVTSLPEG 303

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP-----EIGKMTTLRK 302
           LGKL  L  LD+  N +     +   L  L  L+   N +  +P      E G   +L +
Sbjct: 304 LGKLVNLQKLDISENAITALPADVSGLTALQKLNAKRNKIECIPESATVTETGGFYSLTE 363

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L +  S+L       ++    +RLPE             +            L
Sbjct: 364 LNLAHNQLESWSSALWTSEALQVVNLTANRLPE-------------VPAEISYLYNLTHL 410

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L    ++ + +E+ +   +  L+LS N ++ +P +L   A+L+ L L  N++       
Sbjct: 411 HLNANRITVVANELGQLAALDTLELSFNDLEAVPADLGYLAALRVLSLGYNRLSGEALPD 470

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPP-------- 470
           L++LS+L  L L  NPL+ VP      +P L  L L      ++    EN P        
Sbjct: 471 LSALSALEQLFLAGNPLQHVPG-WVGSLPALSQLHLHLVRPSSLLFTGENAPGHGLYLAE 529

Query: 471 -------FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS--IPEGFKNLT 521
                     LP LQ L +   +L+  P  +  L  L+ L    N+L++  +P+G  +L 
Sbjct: 530 LEELPEELCGLPSLQYLDVSGNKLKALPAKLPELSGLQRLIACHNALETEGVPDGVDDLR 589

Query: 522 SLTELDLSDNNISALP 537
            L E+DLS N +  +P
Sbjct: 590 ELEEIDLSYNQLKTVP 605



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 20/412 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N + +  E L +LP L  L +  N L  L  AIG L  L  L +  NS+  +
Sbjct: 218 LKKLDLSQNGLREFPEALCSLPALADLALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSL 277

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+     L +   + NQ+  LP  LG+ +NL     S N IT+LP D++  + + KL+
Sbjct: 278 PEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSGLTALQKLN 337

Query: 167 VEGNKLTVLSNNLIASWT----MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            + NK+  +  +   + T     LTEL  + N L      + +   L  ++L  NR+  +
Sbjct: 338 AKRNKIECIPESATVTETGGFYSLTELNLAHNQLESWSSALWTSEALQVVNLTANRLPEV 397

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ IS   +L   ++  N ++ +  ELG+L+ L TL+L  N L+    +   L  L VL 
Sbjct: 398 PAEISYLYNLTHLHLNANRITVVANELGQLAALDTLELSFNDLEAVPADLGYLAALRVLS 457

Query: 282 LSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLP----- 334
           L  N LSG   P++  ++ L +L L GNPL+ +   +  G  PAL + +L    P     
Sbjct: 458 LGYNRLSGEALPDLSALSALEQLFLAGNPLQHVPGWV--GSLPALSQLHLHLVRPSSLLF 515

Query: 335 --ENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             EN         E          + S + L + G  L A+P+++ E   + +L    N+
Sbjct: 516 TGENAPGHGLYLAELEELPEELCGLPSLQYLDVSGNKLKALPAKLPELSGLQRLIACHNA 575

Query: 392 IQE--LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           ++   +P  +     L+ + LS N++K  P+++   L   + + L  NPL +
Sbjct: 576 LETEGVPDGVDDLRELEEIDLSYNQLKTVPESV-HYLKDRAHILLQGNPLDE 626



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K+L L   +L+ IP+EI E  E+  LDL  N I+E P  L S  +L  L+L+ N+++ +P
Sbjct: 148 KKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTALCSVTTLAELLLAGNRVRSFP 207

Query: 420 DAI-LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
            A  +  L++L  L L  N LR+ P +    +P L  L L  N      +P    L  L 
Sbjct: 208 PADDMAKLAALKKLDLSQNGLREFP-EALCSLPALADLALDRNYLE-GLSPAIGHLSSLT 265

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L ++   L+  P ++  L+ L+ L ++ N + S+PEG   L +L +LD+S+N I+ALP 
Sbjct: 266 RLSIKANSLKSLPEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPA 325

Query: 539 EL 540
           ++
Sbjct: 326 DV 327



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 61/337 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA-----IGELHMLKSLDVS 99
           V+LQKL ++ N I  L  D+  L  L  LN   NK+  +P +      G  + L  L+++
Sbjct: 308 VNLQKLDISENAITALPADVSGLTALQKLNAKRNKIECIPESATVTETGGFYSLTELNLA 367

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +      + ++ AL   + ++N+L E+P+ +    NL+    + N IT +  +L   
Sbjct: 368 HNQLESWSSALWTSEALQVVNLTANRLPEVPAEISYLYNLTHLHLNANRITVVANELGQL 427

Query: 160 SKMSKLDVEGNKLTVLSNNL-----------------------IASWTMLTELIASKNLL 196
           + +  L++  N L  +  +L                       +++ + L +L  + N L
Sbjct: 428 AALDTLELSFNDLEAVPADLGYLAALRVLSLGYNRLSGEALPDLSALSALEQLFLAGNPL 487

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSI------------------------SGCCSL 232
             +P  +GSL  L +L LH  R    PSS+                         G  SL
Sbjct: 488 QHVPGWVGSLPALSQLHLHLVR----PSSLLFTGENAPGHGLYLAELEELPEELCGLPSL 543

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV--EACQLR-LSVLDLSNNSLSG 289
               +  N L ALPA+L +LS L  L    N L+   V      LR L  +DLS N L  
Sbjct: 544 QYLDVSGNKLKALPAKLPELSGLQRLIACHNALETEGVPDGVDDLRELEEIDLSYNQLKT 603

Query: 290 LPPEIGKMTTLRKLLLTGNPL--RTLRSSLVNGPTPA 324
           +P  +  +     +LL GNPL   TLRS   +  TP+
Sbjct: 604 VPESVHYLKDRAHILLQGNPLDEETLRSYHTHTWTPS 640



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI     + KL L +N +  +P E++    LQ L L  N+IK+WP A L S+++L+ L
Sbjct: 138 PVEILGKKWLKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTA-LCSVTTLAEL 196

Query: 433 KLDNNPLRQVP-SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L  N +R  P +D    +  L+ LDLS N                         LRE P
Sbjct: 197 LLAGNRVRSFPPADDMAKLAALKKLDLSQN------------------------GLREFP 232

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             +  L  L  L L +N L+ +     +L+SLT L +  N++ +LP EL
Sbjct: 233 EALCSLPALADLALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSLPEEL 281


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 180/400 (45%), Gaps = 52/400 (13%)

Query: 29  YKNFDEAGEGDKWWEA---VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           Y+NFD        W+     ++ KL+L+  N+  L   L NL  L  L + +N+L  L  
Sbjct: 7   YENFDA-------WDKQRNTNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSE 59

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            I EL  L+ L +  N I+ +PD IG+ T L       N+L  LP S+G  ++L +    
Sbjct: 60  IISELDNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIR 119

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +T LPE + +  K+S                         LI   N LN +PETI +
Sbjct: 120 SNILTRLPESIGELKKLSF------------------------LILDDNNLNELPETIVN 155

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           LS L  L L  N+I +IP +I     +    + NN LS+LP   G L KL  L L  N L
Sbjct: 156 LSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNML 215

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                    L  + +L+L+NN L  +P  IG +T L K+ L  N L  L  S+ N     
Sbjct: 216 VTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCN----- 270

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEI 382
            L  L+S +  N           L T+  R+   +  + L LE   L+A+P  I +  +I
Sbjct: 271 -LTLLKSLIIMN---------NQLTTLPARIGKLNNLENLFLENNLLTALPESIGDLRKI 320

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           + L L  N +  LP +     +L TL L  N++   P+  
Sbjct: 321 SILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQLTTLPEQF 360



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 43/383 (11%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + +SKL + G  LT L  +L+ +   L +L    N L+ + E I  L  L  L L  N+I
Sbjct: 19  TNVSKLVLSGQNLTTLPPSLL-NLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKI 77

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
           +S+P SI     L    MG+N L  LP  +G L  L  LD+ SN L        +L+ LS
Sbjct: 78  VSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLS 137

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L +N+L+ LP  I  ++ L  L L  N + T+                    PEN  
Sbjct: 138 FLILDDNNLNELPETIVNLSNLTNLSLRNNKITTI--------------------PEN-- 175

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     I    ++    K + L    LS++P       ++ KL L+ N +  LP  
Sbjct: 176 ----------IGQLVKI----KNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKS 221

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
             +  +++ L L+ N++   P+ I  SL+ L  + L +N L  +P +   ++ +L+ L +
Sbjct: 222 FDNLINIKILELNNNRLIQIPENI-GSLTLLEKISLQDNKLTMLP-ESMCNLTLLKSLII 279

Query: 459 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
             N + +LP       L +L+ L+L    L   P  I  L+++ IL L  N L ++PE F
Sbjct: 280 MNNQLTTLP--ARIGKLNNLENLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQF 337

Query: 518 KNLTSLTELDLSDNNISALPPEL 540
           + LT+L  L L +N ++ LP + 
Sbjct: 338 QYLTNLNTLTLKNNQLTTLPEQF 360


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 147/287 (51%), Gaps = 4/287 (1%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNN--IEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           N+ Y+N  EA +       +DLQ     ++N  +  L +++  L  L  L +  N+L+ +
Sbjct: 124 NDKYQNLTEALQHPTDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTI 183

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P    +L  L+ L +SFN +  IP EI     L + D ++NQLK LP  +G   +L    
Sbjct: 184 PKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLY 243

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S+N IT LP+++ +   + KL +  NK+T+L    I +   L  L    N L  +P+ I
Sbjct: 244 LSSNKITILPKEIGNLQHLQKLYLSSNKITILPKE-IGNLQKLEYLYLEVNKLTTLPKEI 302

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  N + +IP  I    +L    + NN L+ LP E+G L  L TLDL++N
Sbjct: 303 GQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNN 362

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L     E   L+ L  LDLS+N L+  P EIGK+  L+ L L   P
Sbjct: 363 KLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRLENIP 409



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 137/276 (49%), Gaps = 33/276 (11%)

Query: 277 LSVLDL-------SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           + VLDL       SN+ L+ LP EIGK+ +L++L+L  N L T+            L+YL
Sbjct: 140 VRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQ------LQYL 193

Query: 330 -RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
            R  L  N+ +      E L  +        +E+      L  +P EI     + KL LS
Sbjct: 194 QRLSLSFNQLTAIPKEIEQLQNL--------QEMDSNNNQLKTLPKEIGNLQHLQKLYLS 245

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N I  LP E+ +   LQ L LS NKI   P  I  +L  L  L L+ N L  +P    K
Sbjct: 246 SNKITILPKEIGNLQHLQKLYLSSNKITILPKEI-GNLQKLEYLYLEVNKLTTLP----K 300

Query: 449 DIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
           +I  L+ L + Y    N+A++P+     +L +LQ L L   +L   P +I  LQ L+ LD
Sbjct: 301 EIGQLRNLKVLYLDHNNLANIPKE--IGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLD 358

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ N L ++P+   NL SL  LDLSDN +++ P E+
Sbjct: 359 LNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEI 394



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 6/178 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L+ N I  L +++ NL  L  L +S NK++ LP  IG L  L+ L +  N +  +
Sbjct: 239 LQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTL 298

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L       N L  +P  +G   NL     +NN +T+LP+++ +   +  LD
Sbjct: 299 PKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLD 358

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +  NKLT L    I +   L  L  S N L   PE IG L  L  L     R+ +IP+
Sbjct: 359 LNNNKLTTLPQE-IGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWL-----RLENIPT 410


>gi|45361617|ref|NP_989386.1| leucine rich repeat containing 1 [Xenopus (Silurana) tropicalis]
 gi|40675662|gb|AAH64859.1| hypothetical protein MGC75617 [Xenopus (Silurana) tropicalis]
          Length = 524

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 196/424 (46%), Gaps = 52/424 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++  + SL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N++ E+P +I     L+  D S N + ++PD      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLA 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L     +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LD+  N+L  
Sbjct: 129 SLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ L L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTELILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L                               KE  I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSL------------------------------PKE--IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L+V      +    LS IPSEI +A E+  LD++ N +  LP  L+S   L+ L LS 
Sbjct: 335 CGLNV----FCVRENRLSRIPSEIAKATELHVLDVAGNRLTHLPLSLTS-LKLKALWLSD 389

Query: 413 NKIK 416
           N+ K
Sbjct: 390 NQSK 393



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 189/453 (41%), Gaps = 88/453 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S++ +P+EI   + +L +    +NQL+ELP    + + L     S+N I  
Sbjct: 14  VESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        IA++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------IANFMQLVELDVSRNEIPEIPESISFCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     SL    + + +L  LP  +G LS L +L+L  N L      
Sbjct: 110 ADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLL------ 163

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                           + LP  + ++  L +L +  N L  L                  
Sbjct: 164 ----------------TFLPESLAQLHRLEELDIGNNELYNL------------------ 189

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             PE              T+ +   +  K+L L+G  L+ +P EI     +  LDLS N 
Sbjct: 190 --PE--------------TIGSLYKL--KDLWLDGNQLADLPPEIGHLKNLLCLDLSENK 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ LP E+S   SL  L++S N I+  PD I   L +LS LK+D N L Q+ +D   +  
Sbjct: 232 LERLPEEISGLKSLTDLLVSHNSIEVLPDGI-GKLKNLSILKVDQNRLMQL-TDCIGECE 289

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L  L L+ N +  LP +     L  L  L + R +L   P +I     L +  + +N L
Sbjct: 290 SLTELILTENQLLVLPRS--IGKLKKLCNLNIDRNKLMSLPKEIGGCCGLNVFCVRENRL 347

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             IP      T L  LD++ N ++ LP  L S+
Sbjct: 348 SRIPSEIAKATELHVLDVAGNRLTHLPLSLTSL 380



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +P+ F  L  L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|358337143|dbj|GAA55559.1| protein scribble homolog [Clonorchis sinensis]
          Length = 1361

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 135/247 (54%), Gaps = 2/247 (0%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           L+ELP   GELH+L+  ++  N +  +PD       L   D  SN+ +E+P+ LG+ +NL
Sbjct: 6   LTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLGQLVNL 65

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           ++    +N + +LP ++ +  ++ +LD+  N +  L +  I     L +L  S+N LN +
Sbjct: 66  TELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDE-IGGMVSLCDLNLSQNNLNCL 124

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P T G L +L  L L+QN++L++  SI GC  L E Y+  N L  LP  +G L+ +  L+
Sbjct: 125 PNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQELYLTENFLPTLPTTVGNLTSMFLLN 184

Query: 260 LHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           +  NQL +  VE  +   L++L L  N L  +P EIG    LR L ++GN L  L  +L 
Sbjct: 185 IDQNQLTDLPVEIGKCTSLNILSLRENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLA 244

Query: 319 NGPTPAL 325
             P  AL
Sbjct: 245 QCPLTAL 251



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+K  L  N ++ L +    L  L  L++  N+  E+P  +G+L  L  L +  N +  +
Sbjct: 19  LEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLGQLVNLTELWMDDNELKAL 78

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G+   L + D S N +  LP  +G  ++L D   S N +  LP       K++ L 
Sbjct: 79  PPEVGNMQRLQQLDLSENAINALPDEIGGMVSLCDLNLSQNNLNCLPNTFGQLKKLTVLK 138

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  L+ + I   + L EL  ++N L  +P T+G+L+ +  L++ QN++  +P  I
Sbjct: 139 LNQNQLLTLTPS-IGGCSGLQELYLTENFLPTLPTTVGNLTSMFLLNIDQNQLTDLPVEI 197

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C SL    +  N L  +P E+G   +L  LD+  N+L+   +   Q  L+ L LS N
Sbjct: 198 GKCTSLNILSLRENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLAQCPLTALWLSPN 256



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 128/289 (44%), Gaps = 37/289 (12%)

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L ELP+  G    L   +  +NC+ SLP+  A   ++  LD+  N+   +   ++     
Sbjct: 6   LTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPT-VLGQLVN 64

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LTEL    N L  +P  +G++ RL +LDL +N I ++P  I G  SL +  +  N L+ L
Sbjct: 65  LTELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDEIGGMVSLCDLNLSQNNLNCL 124

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P   G+L KL                      +VL L+ N L  L P IG  + L++L L
Sbjct: 125 PNTFGQLKKL----------------------TVLKLNQNQLLTLTPSIGGCSGLQELYL 162

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           T N L TL         P  +  L S    N D    T     I   T L++    LSL 
Sbjct: 163 TENFLPTL---------PTTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNI----LSLR 209

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
              L  IP EI     +  LD+S N ++ LP  L+ C  L  L LS N+
Sbjct: 210 ENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLAQCP-LTALWLSPNQ 257



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 24/256 (9%)

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           SL+ LP + G++  L K  L  N L++L  S        L++     L  NE  E  T  
Sbjct: 5   SLTELPTDFGELHLLEKCELRDNCLKSLPDSFAQ-----LVRLEFLDLGSNEFQEMPTVL 59

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L+ +         EL ++   L A+P E+     + +LDLS N+I  LP E+    SL
Sbjct: 60  GQLVNLT--------ELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDEIGGMVSL 111

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPMLQILDLSYNIAS 464
             L LS+N +   P+     L  L+ LKL+ N L    PS G      LQ L L+ N   
Sbjct: 112 CDLNLSQNNLNCLPNT-FGQLKKLTVLKLNQNQLLTLTPSIG--GCSGLQELYLTENF-- 166

Query: 465 LPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           LP  P  +++ +L  ++L  +   QL + P +I +   L IL L +N L+ IP+   N  
Sbjct: 167 LPTLP--TTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNILSLRENLLRRIPKEIGNCL 224

Query: 522 SLTELDLSDNNISALP 537
            L  LD+S N +  LP
Sbjct: 225 RLRVLDVSGNRLERLP 240



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+    V L  L L+ NN+  L      L  LTVL ++ N+L  L  +IG    L+ L +
Sbjct: 103 DEIGGMVSLCDLNLSQNNLNCLPNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQELYL 162

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +P  +G+ T++   +   NQL +LP  +G+C +L+      N +  +P+++ +
Sbjct: 163 TENFLPTLPTTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNILSLRENLLRRIPKEIGN 222

Query: 159 CSKMSKLDVEGNKLTVL 175
           C ++  LDV GN+L  L
Sbjct: 223 CLRLRVLDVSGNRLERL 239



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 40/279 (14%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           M + +L+ LP + G+L  L   +L  N LK       QL RL  LDL +N    +P  +G
Sbjct: 1   MNDISLTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLG 60

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L +L +  N L+ L   + N     + +  +  L EN  +        ++++    
Sbjct: 61  QLVNLTELWMDDNELKALPPEVGN-----MQRLQQLDLSENAINALPDEIGGMVSLC--- 112

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                +L+L   NL+ +P+   +  ++T L L++N +  L P +  C+ LQ L L+ N +
Sbjct: 113 -----DLNLSQNNLNCLPNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQELYLTENFL 167

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
              P  +  +L+S+  L +D N L         D+P+      S NI SL EN       
Sbjct: 168 PTLPTTV-GNLTSMFLLNIDQNQL--------TDLPVEIGKCTSLNILSLREN------- 211

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
                 LRR+     P +I    +LR+LD+S N L+ +P
Sbjct: 212 -----LLRRI-----PKEIGNCLRLRVLDVSGNRLERLP 240



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 4/103 (3%)

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L ++P+D F ++ +L+  +L  N + SLP++  F+ L  L+ L L   + +E PT + +L
Sbjct: 6   LTELPTD-FGELHLLEKCELRDNCLKSLPDS--FAQLVRLEFLDLGSNEFQEMPTVLGQL 62

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L  L +  N L+++P    N+  L +LDLS+N I+ALP E+
Sbjct: 63  VNLTELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDEI 105


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E L+N   + +LN+ H  L+ LP  IG L  L+ LD+    +  +P EIG    L + D 
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDL 90

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +SNQL + P  +G    L      +N   +LP+++    K+  L++  N+LT L N  I 
Sbjct: 91  TSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNE-IG 149

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L    +G+N 
Sbjct: 150 KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQ 209

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP E+GKL KLG L+L  NQL+    E  +LR L  LDL++N L  LP EIG +  L
Sbjct: 210 LGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269

Query: 301 R 301
           R
Sbjct: 270 R 270



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 31/223 (13%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +DL+KL      I +L+        L  L+++ N+L++ P  IG L  LK L +  N 
Sbjct: 65  ERLDLEKLTTLPKEIGRLQN-------LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQ 117

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P EIG    L   + S+NQL  LP+ +G+  +L     SNN +TSLP+++     +
Sbjct: 118 FATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNL 177

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+                        L  +P+ IG L  L  LDL  N++ ++
Sbjct: 178 QYLDLFYNQ------------------------LGNLPKEIGKLRNLEWLDLGSNQLGNL 213

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I     L E  +  N L +LP E+GKL KL  LDL SNQL
Sbjct: 214 PQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL  +      +TSLP+++    ++ +LD+E  KLT L    I     L EL  + N
Sbjct: 42  RILNLGHYP-----LTSLPQEIGTLQRLERLDLE--KLTTLPKE-IGRLQNLEELDLTSN 93

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG+L RL  L L  N+  ++P  I     L    + NN L+ LP E+GKL  
Sbjct: 94  QLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRS 153

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L +NQL     E  +LR L  LDL  N L  LP EIGK+  L  L L  N L   
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQL--- 210

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                              LP+             I    +L     EL L G  L ++P
Sbjct: 211 -----------------GNLPQE------------IGKLQKLG----ELELSGNQLRSLP 237

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            EI +  ++ KLDL+ N + +LP E+ +   L+ 
Sbjct: 238 QEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRLRA 271



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 1/182 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N + K  +++  L  L  L++  N+ + LP  IG+L  L+ L++S N +  
Sbjct: 84  NLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTT 143

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG   +L +   S+NQL  LP  + +  NL       N + +LP+++     +  L
Sbjct: 144 LPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWL 203

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  S N L  +P+ IG L +L +LDL  N+++ +P  
Sbjct: 204 DLGSNQLGNLPQE-IGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262

Query: 226 IS 227
           I 
Sbjct: 263 IG 264



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 34/239 (14%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG+L RL RLDL   ++ ++P  I    +L E  + +N L+  P E+G L +L
Sbjct: 51  LTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQRL 108

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L SNQ      E  +LR L  L+LSNN L+ LP EIGK+ +L++L L+ N L +L 
Sbjct: 109 KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL- 167

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS----LEGMNLS 370
                   P  +  LR+              + L     +L    KE+     LE ++L 
Sbjct: 168 --------PQEINKLRNL-------------QYLDLFYNQLGNLPKEIGKLRNLEWLDLG 206

Query: 371 A-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +     +P EI +  ++ +L+LS N ++ LP E+     L+ L L+ N++   P  I T
Sbjct: 207 SNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGT 265



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N    L +++  L  L  LN+S+N+L+ LP  IG+L  LK L +S N +  +
Sbjct: 108 LKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL 167

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L   D   NQL  LP  +G+  NL      +N + +LP+++    K+ +L+
Sbjct: 168 PQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELE 227

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           + GN+L  L    I     L +L  + N L  +P+ IG+L RL
Sbjct: 228 LSGNQLRSLPQE-IGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL L    L+  P EI     +  L L  N    LP E+     L+ L LS N++   P
Sbjct: 86  EELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLP 145

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + I   L SL  L L NN L  +P +    +  LQ LDL YN + +LP+      L +L+
Sbjct: 146 NEI-GKLRSLKRLYLSNNQLTSLPQE-INKLRNLQYLDLFYNQLGNLPKE--IGKLRNLE 201

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L   QL   P +I +LQ+L  L+LS N L+S+P+    L  L +LDL+ N +  LP 
Sbjct: 202 WLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQ 261

Query: 539 ELVSV 543
           E+ ++
Sbjct: 262 EIGTL 266



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 123/288 (42%), Gaps = 65/288 (22%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +G+  L++LP E+G L +L  LDL                          L+ LP EIG+
Sbjct: 46  LGHYPLTSLPQEIGTLQRLERLDLEK------------------------LTTLPKEIGR 81

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L +L LT N L                    ++ P+             I    RL 
Sbjct: 82  LQNLEELDLTSNQL--------------------AKFPQE------------IGTLQRL- 108

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              K LSLE    + +P EI +  ++  L+LS N +  LP E+    SL+ L LS N++ 
Sbjct: 109 ---KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLT 165

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             P  I   L +L  L L  N L  +P +    +  L+ LDL  N + +LP+      L 
Sbjct: 166 SLPQEI-NKLRNLQYLDLFYNQLGNLPKE-IGKLRNLEWLDLGSNQLGNLPQE--IGKLQ 221

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            L EL L   QLR  P +I +L++L  LDL+ N L  +P+    L  L
Sbjct: 222 KLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 5/173 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI     + +LDL+ N + + P E+ +   L+ L L  N+    P  I   L  
Sbjct: 72  LTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEI-GKLRK 130

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L NN L  +P++    +  L+ L LS N + SLP+    + L +LQ L L   QL
Sbjct: 131 LEWLNLSNNQLTTLPNE-IGKLRSLKRLYLSNNQLTSLPQE--INKLRNLQYLDLFYNQL 187

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I +L+ L  LDL  N L ++P+    L  L EL+LS N + +LP E+
Sbjct: 188 GNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEI 240



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 7/180 (3%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L+L    L+++P EI     + +LDL +  +  LP E+    +L+ L L+ N++  +P  
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLEK--LTTLPKEIGRLQNLEELDLTSNQLAKFPQE 101

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I T L  L  L L++N    +P +    +  L+ L+LS N + +LP       L  L+ L
Sbjct: 102 IGT-LQRLKWLSLESNQFATLPKE-IGKLRKLEWLNLSNNQLTTLPNE--IGKLRSLKRL 157

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           YL   QL   P +I +L+ L+ LDL  N L ++P+    L +L  LDL  N +  LP E+
Sbjct: 158 YLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEI 217


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 165/363 (45%), Gaps = 39/363 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D  +   L  LN+S+  L E P +I  L  L+ L +  N+ + +P EI   + L   D S
Sbjct: 210 DFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFS 269

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N L  +P  +GR  +L +   + N I  L E+L + SK++KL++  N    L N  I  
Sbjct: 270 ENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNA-IGQ 328

Query: 183 WTMLTEL-IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             +L EL I   + L  +PE+IG LS L RL + ++ ++S+P SI     L    M NN 
Sbjct: 329 LKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNR 388

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           +  LP   G L  L  L +H N+L +       LR L  LDLS N L+ LP  I  M  L
Sbjct: 389 IRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENL 448

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
             L+L  N L TL  S+                            E L +++  ++    
Sbjct: 449 TILVLDNNELTTLPFSI-------------------------GQLECLTSLSAYINT--- 480

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
                   +  +PS + +   +  L+LS N+IQ+LP  +   +SL  L +S NK   +P 
Sbjct: 481 --------IKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVLDISDNKFSRFPK 532

Query: 421 AIL 423
            I 
Sbjct: 533 VIF 535



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 76/546 (13%)

Query: 25  PNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           P++++ + +EA          D+ KL L   +I+     + ++  L  L++S N +  +P
Sbjct: 29  PDKIFFDLEEAARN-----PSDVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIP 83

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
             I +L  LK LD+  NS+  +P    +   L      +N+ KELP  L     L   K 
Sbjct: 84  EEIDKLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKI 143

Query: 145 SNNCITSLPEDLADCSKMSKLDVEG-------NKLTVLSNNLIA--SWTMLTELIASKNL 195
             N I SLPE     + +S L ++         K  V +N   A  S +++  L  S   
Sbjct: 144 RENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQF 203

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               P    S + L  L+L    +   P SI     L   ++G N   ++PAE+ +LS  
Sbjct: 204 TLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLS-- 261

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                                L  LD S N+L+ +P EIG+++ L++L L  N ++ L  
Sbjct: 262 --------------------HLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSE 301

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIP 373
           +L       L K  +  L +N   +       L  +        +EL + G N  L+ IP
Sbjct: 302 NL-----GELSKLTKLNLTKNAFQQLPNAIGQLKLL--------EELHI-GFNDFLTKIP 347

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I +   + +L + ++ +  LP  +     L+ L +  N+I+  P++    L SL  L+
Sbjct: 348 ESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPES-FGDLESLKYLR 406

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP--------------ENPPFSSLPH-- 476
           +  N L Q+P D F ++ +L+ LDLS N + +LP              +N   ++LP   
Sbjct: 407 IHKNKLTQLP-DSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNNELTTLPFSI 465

Query: 477 -----LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
                L  L      ++  P+ + +L+ L  L+LS N++Q +P   ++L+SL  LD+SDN
Sbjct: 466 GQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVLDISDN 525

Query: 532 NISALP 537
             S  P
Sbjct: 526 KFSRFP 531



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 34/213 (15%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL L    +  IP EI +   +  LDL  NS+  LP    +   L+ L +  NK K+ P
Sbjct: 70  EELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELP 129

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQI---------------------- 455
           D  L+ L  L  LK+  N +  +P   +GF  + ML I                      
Sbjct: 130 DE-LSLLKKLRILKIRENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAK 188

Query: 456 --------LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                   LDLS    +LP    FSS   L+ L L    L+E P  I+ L  L  L L +
Sbjct: 189 ESPSIVYHLDLSVQF-TLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGR 247

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           N+  S+P     L+ L  LD S+NN++ +P E+
Sbjct: 248 NNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEI 280



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 467 ENPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +N P S  S+ +L+EL+L    +   P +I +L+ L+ LDL  NSL ++P  F+NL  L 
Sbjct: 57  KNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASFRNLNKLE 116

Query: 525 ELDLSDNNISALPPEL 540
            L +  N    LP EL
Sbjct: 117 HLSIETNKFKELPDEL 132


>gi|156375467|ref|XP_001630102.1| predicted protein [Nematostella vectensis]
 gi|156217116|gb|EDO38039.1| predicted protein [Nematostella vectensis]
          Length = 418

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 18/426 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           + +L + FN + ++PD++GS  +L +   + N L  LP    R  NL++   + N +  L
Sbjct: 1   ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEEL 60

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE L   SK+  L++ GNKL  L ++  A    LTEL   +N L+ +  +   +  L  L
Sbjct: 61  PESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVL 120

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYC 269
           +L  N I  +P        L    +  N +  LP   G L  L + D+  N ++   E  
Sbjct: 121 ELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERF 180

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------VNGPTP 323
             AC L     D  NN+++ LP   G +  +  L L+ N L    S+L      ++G T 
Sbjct: 181 ESACFLEHLYAD--NNNITWLPDWFGDLPNIINLCLSDNELSD--SALPDHFGSISGKTL 236

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           + L    +R+ +  DS     +   + + + ++   +     G  LS +P    +   +T
Sbjct: 237 SSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLT 296

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           KL L  N +  LP +     +L+ L + +N+I+  PD+   +LS L  L+L  N L ++P
Sbjct: 297 KLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSF-CNLSKLWFLQLSKNHLTELP 355

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            + F ++  L  L L  N ++SLP    F++L +++ L L R +L E P  +L+L+ L  
Sbjct: 356 -ENFGNLTSLVELRLDSNQLSSLP--ASFANLTNVKTLDLYRNKLSEIPRVLLKLENLMR 412

Query: 503 LDLSQN 508
           LDL  N
Sbjct: 413 LDLDGN 418



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 198/426 (46%), Gaps = 40/426 (9%)

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           ++  K   N +  LP+DL   + +++L + GN LT L + + A    LTEL  ++N L  
Sbjct: 1   ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPD-VFARLGNLTELHLNENSLEE 59

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           +PE++G LS+L  L+L  N++  +     +G  SL E  +  N LS L      +  L  
Sbjct: 60  LPESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKV 119

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L  N ++    +   LR L V++LS N++  LP   G +  L+   +TGN +  L   
Sbjct: 120 LELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPER 179

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT---MATRLSVTSKELSLEGMNLSAIP 373
                +   L++L +      D+   T   D          L ++  ELS      SA+P
Sbjct: 180 F---ESACFLEHLYA------DNNNITWLPDWFGDLPNIINLCLSDNELSD-----SALP 225

Query: 374 SEIWE--AGEITKLDLSRNSIQELPPELSSCASLQTLILSR-------------NKIKDW 418
                     ++ LDLS N I +LP  +     L+TL L               N +   
Sbjct: 226 DHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHL 285

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD+  + +++L+ L LD N +  +P D F D+  L+ LD+  N I  LP++  F +L  L
Sbjct: 286 PDSF-SQMANLTKLHLDENQVVCLPDD-FGDLVNLEWLDVGQNRIEMLPDS--FCNLSKL 341

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L L +  L E P +   L  L  L L  N L S+P  F NLT++  LDL  N +S +P
Sbjct: 342 WFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIP 401

Query: 538 PELVSV 543
             L+ +
Sbjct: 402 RVLLKL 407



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 16/295 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N+IE+L ED  NL  L V+N+S N + +LP + G L  LKS D++ N I  
Sbjct: 116 NLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIEN 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI--TSLPEDLADCS--K 161
           +P+   SA  L      +N +  LP   G   N+ +   S+N +  ++LP+     S   
Sbjct: 176 LPERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISGKT 235

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +S LD+ GN++T L ++       + EL   K L   +  TI  L R  R   + N +  
Sbjct: 236 LSSLDLSGNRITKLPDS-------MGELKELKTL--HLGSTINELER--RAFQNGNWLSH 284

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P S S   +L + ++  N +  LP + G L  L  LD+  N+++      C L +L  L
Sbjct: 285 LPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFL 344

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            LS N L+ LP   G +T+L +L L  N L +L +S  N      L   R++L E
Sbjct: 345 QLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSE 399



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +  +L KL L  N +  L +D  +L  L  L+V  N++  LP +   L  L  L +
Sbjct: 287 DSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQL 346

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N + ++P+  G+ T+LV+    SNQL  LP+S     N+       N ++ +P  L  
Sbjct: 347 SKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLK 406

Query: 159 CSKMSKLDVEGN 170
              + +LD++GN
Sbjct: 407 LENLMRLDLDGN 418


>gi|110626183|ref|NP_001007176.1| protein scribble homolog [Danio rerio]
 gi|123904207|sp|Q4H4B6.1|SCRIB_DANRE RecName: Full=Protein scribble homolog; AltName: Full=Scribble1
 gi|71000206|dbj|BAE07162.1| scribble1 [Danio rerio]
          Length = 1724

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 176/359 (49%), Gaps = 61/359 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP+E+Y+          + ++  E  K ++   +L+KL L+ N I+KL  D+ N  
Sbjct: 23  SLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFT 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD-------------------- 108
            L  L++S N +SE+P  I     L+  D S N + ++PD                    
Sbjct: 83  QLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQS 142

Query: 109 ---EIGSATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDF 142
              +IG+ + LV                       + D  SN L+ LP +LG   NL + 
Sbjct: 143 LPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLREL 202

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N ++SLP +L +  ++  LDV  N+L+ L    I+    LT+L+ S+NLL  +P++
Sbjct: 203 WLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTE-ISGLIALTDLLLSENLLEILPDS 261

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IGSL +L  L ++QNR++ +  SI  C +L E  +  N L +LP  LGKL KL  L++  
Sbjct: 262 IGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLTNLNVDR 321

Query: 263 NQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N+L     E   C + L+VL L +N L  LPPE+   T L  L + GN L+ L  +L N
Sbjct: 322 NRLSSVPAELGGC-VSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFALAN 379



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 177/358 (49%), Gaps = 39/358 (10%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     LH L+ L +S N I K+P ++ + T LV+ D S N + E+P ++  C 
Sbjct: 46  NQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQ 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LP+       ++ L +  N ++                      
Sbjct: 106 SLEIADF--SGNPLTRLPDGFTQLRGLAHLSL--NDVS---------------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+LS L+ L+L +N + S+PSS+S    L +  +G+N L  LP  LG L  L
Sbjct: 140 LQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E   LR L  LD+S N LS LP EI  +  L  LLL+ N L  L 
Sbjct: 200 RELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLLEILP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDS--------EASTTKEDLITMATRLSVTSK--ELSL 364
            S+ +    ++LK  ++RL    DS        E   T+  L ++   L    K   L++
Sbjct: 260 DSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLTNLNV 319

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +   LS++P+E+     +  L L  N + +LPPEL++   L  L ++ N++++ P A+
Sbjct: 320 DRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFAL 377



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N +E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLS 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI    AL     S N L+ LP S+G    LS  K + N +  L + + +C     
Sbjct: 234 ELPTEISGLIALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDSIGECEN--- 290

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                LTEL+ ++NLL  +P ++G L +L  L++ +NR+ S+P+
Sbjct: 291 ---------------------LTELMLTENLLQSLPRSLGKLKKLTNLNVDRNRLSSVPA 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            + GC SL    + +N L  LP EL   ++L  LD+  N+L+        L L  + L+ 
Sbjct: 330 ELGGCVSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFALANLNLKAMWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 168/373 (45%), Gaps = 40/373 (10%)

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT + + +      L EL+   N L  +P+    L  L +L L  N I  +P  ++    
Sbjct: 24  LTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQ 83

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E  +  N +S +P  +     L   D   N L        QLR L+ L L++ SL  L
Sbjct: 84  LVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSL 143

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P +IG ++ L  L L  N L++L SSL       L+K  +  L  N       T   L  
Sbjct: 144 PNDIGNLSNLVTLELRENLLKSLPSSLS-----FLVKLEQLDLGSNVLEVLPDTLGALPN 198

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +        +EL L+   LS++P E+    ++  LD+S N + ELP E+S   +L  L+L
Sbjct: 199 L--------RELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLL 250

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 470
           S N ++  PD+I  SL  LS LK++ N                +++ L+ +I    EN  
Sbjct: 251 SENLLEILPDSI-GSLKKLSILKVNQN----------------RLVHLTDSIGEC-EN-- 290

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
                 L EL L    L+  P  + +L++L  L++ +N L S+P       SL  L L D
Sbjct: 291 ------LTELMLTENLLQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRD 344

Query: 531 NNISALPPELVSV 543
           N +  LPPEL + 
Sbjct: 345 NRLGKLPPELANA 357



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 65/290 (22%)

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLR 330
           C   +  +D  + SL+ +P EI +   +L +LLL  N LR L       P P   L  LR
Sbjct: 10  CNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLREL-------PKPFFRLHNLR 62

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                         +L L    +  +P ++    ++ +LD+SRN
Sbjct: 63  ------------------------------KLGLSDNEIQKLPPDVANFTQLVELDISRN 92

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFK 448
            I E+P  +  C SL+    S N +   PD   T L  L+ L L++  L+ +P+D     
Sbjct: 93  DISEIPENIKFCQSLEIADFSGNPLTRLPDG-FTQLRGLAHLSLNDVSLQSLPNDIGNLS 151

Query: 449 DIPMLQI--------------------LDLSYNI-ASLPENPPFSSLPHLQELYLRRMQL 487
           ++  L++                    LDL  N+   LP+     +LP+L+EL+L R QL
Sbjct: 152 NLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDT--LGALPNLRELWLDRNQL 209

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
              P ++  L+QL  LD+S+N L  +P     L +LT+L LS+N +  LP
Sbjct: 210 SSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLLEILP 259


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 31/270 (11%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  L++++N+L+ LP  IG+L  L+ L +  N +  +P+EIG+   L   +  +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP  +G    L     +NN + +LP+++    ++  L +E N+L +L            
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL------------ 110

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                       P+ IG L  L  L L  NR+ S P  I     L   Y+ NN L+ LP 
Sbjct: 111 ------------PQEIGKLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPK 158

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  LDL  NQL     E   L RL  L L NN L+ LP EIGK+  L  L L+
Sbjct: 159 EIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLS 218

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           GNP  T    +V       LK+L++ + +N
Sbjct: 219 GNPFTTFPQEIVG------LKHLKTLVLQN 242



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 5/258 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L LA+N +  L  ++  L  L  L + +N+L+ LP  IG L  L+SL++  N ++ +
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITL 64

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+   L     ++NQL  LP  +G+   L      NN +  LP+++     + +L 
Sbjct: 65  PKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELI 124

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+L       I +   L  L  + N L  +P+ IG L  L  LDL  N+++++P  I
Sbjct: 125 LENNRLESFPKE-IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEI 183

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L    + NN L+ LP E+GKL KL  L+L  N    +  E   L+     L    
Sbjct: 184 GTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQEIVGLK----HLKTLV 239

Query: 287 LSGLPPEIGKMTTLRKLL 304
           L  +P  + +   +RKLL
Sbjct: 240 LQNIPALLSEKEKIRKLL 257



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 39/243 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 53  SLNLENNRLITLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L  LP  IG+L  LK L +  N +   P EIG+   L     ++NQL  LP  
Sbjct: 100 LGLENNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKE 159

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL D   S+N + +LPE++    ++  L ++ N+L  L                 
Sbjct: 160 IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATL----------------- 202

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L +L  L+L  N   + P  I G   L    + N  + AL +E  K+
Sbjct: 203 -------PKEIGKLEKLEDLNLSGNPFTTFPQEIVGLKHLKTLVLQN--IPALLSEKEKI 253

Query: 253 SKL 255
            KL
Sbjct: 254 RKL 256



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 126/282 (44%), Gaps = 54/282 (19%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  N++ ++P+ I     L    + NN L+ LP E+G L  L +L+L +N+L     E
Sbjct: 8   LHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKE 67

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L +L  L L+NN L+ LP EIGK+  L  L L  N LR L         P  +  L+
Sbjct: 68  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL---------PQEIGKLQ 118

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            KEL LE   L + P EI    ++  L L+ N
Sbjct: 119 N---------------------------LKELILENNRLESFPKEIGTLQKLQHLYLANN 151

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +L+ L LS N++   P+ I T L  L  L L NN L  +P +  K +
Sbjct: 152 QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGT-LQRLEWLSLKNNQLATLPKEIGK-L 209

Query: 451 PMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRM 485
             L+ L+LS N        PF++ P       HL+ L L+ +
Sbjct: 210 EKLEDLNLSGN--------PFTTFPQEIVGLKHLKTLVLQNI 243



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L LE   L+ +P EI     +  L+L  N +  LP E+ +   L+ L L+ N++   P  
Sbjct: 31  LRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKE 90

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           I   L  L  L L+NN LR +P +  K   + +++  +  + S P+     +L  LQ LY
Sbjct: 91  I-GKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLESFPKE--IGTLQKLQHLY 147

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   QL   P +I +LQ L+ LDLS N L ++PE    L  L  L L +N ++ LP E+
Sbjct: 148 LANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATLPKEI 206



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           P L+ L+L   QL   P +I +L++L  L L  N L ++PE    L +L  L+L +N + 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 535 ALPPELVSV 543
            LP E+ ++
Sbjct: 63  TLPKEIGTL 71


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 27/353 (7%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG--R 135
           N + +LP     L+ L+ L +S N I+KIP +I +   LV+ D S N++ ++P  +   R
Sbjct: 47  NHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLR 106

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NKLTVLSNNLIASWTMLTELIA--- 191
            L ++DF  S+N I+ LP   A  +++  L V G N ++++S  L   +  L++L++   
Sbjct: 107 SLQIADF--SSNPISRLP---AGFTQLRNLTVLGLNDMSLIS--LPQDFGCLSKLVSLEL 159

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +NLL  +PE+I  L++L RLDL  N I  +PS +    SL E ++ +N L  LP E+G 
Sbjct: 160 RENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGL 219

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  LD+  N+L+E   E   L  L+ L LS N L  LP  I K+T L  L L  N L
Sbjct: 220 LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRL 279

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL  S+  G    + + +   L EN  SE   T  +++ +          L+++  +L 
Sbjct: 280 HTLNDSI--GCCVHMQELI---LTENFLSELPATVGNMLVL--------NNLNVDRNSLV 326

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           A+PSE+    ++  L L  N +  LP EL +C  L  L +S N ++  P +++
Sbjct: 327 AVPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLV 379



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 137/255 (53%), Gaps = 4/255 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N ++ L E +  L  L  L++  N++ ELP+ +G L  L+ L +  N ++++
Sbjct: 154 LVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    LV  D S N+L+ELP  +G    L+D   S N + +LP  ++  + +S L 
Sbjct: 214 PPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ I     + ELI ++N L+ +P T+G++  L  L++ +N ++++PS +
Sbjct: 274 LDQNRLHTL-NDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSEL 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C  L    +  N L+ LPAELG   +L  LD+  N L+        L+L  + LS N 
Sbjct: 333 GNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNLQLKAVWLSENQ 392

Query: 287 LSGLP---PEIGKMT 298
              +P   P++ + T
Sbjct: 393 SQPVPTFQPDVDETT 407



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 39/380 (10%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++    L+KL L+ N+I K+  D++N   L  L+VS N++ ++P  I  L  L+  D S 
Sbjct: 56  FFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSS 115

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N I ++P        L     +   L  LP   G    L   +   N + +LPE ++  +
Sbjct: 116 NPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESISQLT 175

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           K+ +LD+  N++  L ++ +     L EL    N L  +P  IG L +L+ LD+ +NR+ 
Sbjct: 176 KLERLDLGDNEIDELPSH-VGYLPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSENRLE 234

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
            +P  I G   L + ++  N L  LP  + KL+ L  L L  N+L        C + +  
Sbjct: 235 ELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQE 294

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L+ N LS LP  +G M  L  L +  N L  + S L N                    
Sbjct: 295 LILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGN-------------------- 334

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                         +L V    LSL    L+ +P+E+   GE+  LD+S N +Q LP  L
Sbjct: 335 ------------CRQLGV----LSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSL 378

Query: 400 SSCASLQTLILSRNKIKDWP 419
            +   L+ + LS N+ +  P
Sbjct: 379 VNL-QLKAVWLSENQSQPVP 397



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 160/356 (44%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N +  +P+    L RL +L L  N I+ IPS I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++  L  L   D  SN +        QLR L+VL L++ SL  LP + G ++ L  L 
Sbjct: 99  PEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKLVSLE 158

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L+ L  S+       L K  R  L +NE  E  +    L ++        +EL L
Sbjct: 159 LRENLLKNLPESISQ-----LTKLERLDLGDNEIDELPSHVGYLPSL--------QELWL 205

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +   L  +P EI    ++  LD+S N ++ELP E+     L  L LS+N ++  P+ I +
Sbjct: 206 DHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGI-S 264

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L++LS LKLD N L  +                         N       H+QEL L  
Sbjct: 265 KLTNLSILKLDQNRLHTL-------------------------NDSIGCCVHMQELILTE 299

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L E P  +  +  L  L++ +NSL ++P    N   L  L L +N ++ LP EL
Sbjct: 300 NFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAEL 355



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S + +EL L+  ++  +P   +    + KL LS N I ++P ++ +  +L  L +SRN
Sbjct: 34  RYSNSLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
           +I D P+ I   L SL      +NP+ ++P+ GF  +  L +L L+  ++ SLP++  F 
Sbjct: 94  EIGDIPEDI-KHLRSLQIADFSSNPISRLPA-GFTQLRNLTVLGLNDMSLISLPQD--FG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L  L LR   L+  P  I +L +L  LDL  N +  +P     L SL EL L  N 
Sbjct: 150 CLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQ 209

Query: 533 ISALPPEL 540
           +  LPPE+
Sbjct: 210 LLRLPPEI 217



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ I    +SL  L LD N +R +P  GF  +  L+ L LS N I  +P +    +  +L
Sbjct: 29  PEEIFRYSNSLEELLLDANHIRDLPK-GFFRLYRLRKLGLSDNDIIKIPSD--IQNFVNL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R ++ + P DI  L+ L+I D S N +  +P GF  L +LT L L+D ++ +LP
Sbjct: 86  VELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLP 145

Query: 538 PEL 540
            + 
Sbjct: 146 QDF 148



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 13/145 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L  +PN + K               +L  L L  N +  L + +     +  L
Sbjct: 249 LHLSQNLLETLPNGISK-------------LTNLSILKLDQNRLHTLNDSIGCCVHMQEL 295

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++ N LSELPA +G + +L +L+V  NS++ +P E+G+   L       N+L  LP+ L
Sbjct: 296 ILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAEL 355

Query: 134 GRCLNLSDFKASNNCITSLPEDLAD 158
           G C  L     S N +  LP  L +
Sbjct: 356 GNCGELHVLDVSGNLLQHLPYSLVN 380



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 447 FKDIPML-----QILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQ 499
           FK IP+      QI  +    +SLP  P   F     L+EL L    +R+ P    RL +
Sbjct: 2   FKYIPIFKGCNRQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYR 61

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LR L LS N +  IP   +N  +L ELD+S N I  +P ++
Sbjct: 62  LRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDI 102


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEIEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEIEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|297846642|ref|XP_002891202.1| hypothetical protein ARALYDRAFT_891227 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337044|gb|EFH67461.1| hypothetical protein ARALYDRAFT_891227 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1007

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 248/531 (46%), Gaps = 50/531 (9%)

Query: 47  LQKLILAHNNIEKLKEDL--RNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           ++KL L  N IE   +D    +LP L  ++ S N+ S  +P   G L  L   D+S N +
Sbjct: 82  IKKLNLTGNAIEGTFQDFPFSSLPNLAYIDFSMNRFSGTIPPQFGNLFKLIYFDLSTNHL 141

Query: 104 MK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
            + IP E+G+   L     S+N+L   +PSS+G+  NL+      N +T  +P DL +  
Sbjct: 142 TREIPPELGNLQNLKGLSLSNNKLAGSIPSSIGKLKNLTVLYLYKNYLTGVIPPDLGNME 201

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            M  L++  NKLT    + + +   LT L    N L G +P  +G++  +I L L +N++
Sbjct: 202 YMIDLELSHNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMISLALSENKL 261

Query: 220 L-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--L 275
             SIPSS+    +L   Y+  N ++  +P ELG +  +  L+L  N L      +     
Sbjct: 262 TGSIPSSLGNLKNLTVLYLHQNYITGVIPPELGNMESMIDLELSQNNLTGSIPSSFGNFT 321

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLT--------------GNPLR--TLRSSLV 318
           +L  L LS N LSG +PP +   + L +L L               G  L+   L  + +
Sbjct: 322 KLKSLYLSYNHLSGAIPPGVANSSELTELQLAINNFSGFLPKNICKGGKLQFIALYDNHL 381

Query: 319 NGPTPALLK----YLRSRLPENED----SEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            GP P  L+     +R++   N+     SEA     DL  +         +LS    N  
Sbjct: 382 KGPIPKSLRDCKSLIRAKFVGNKFVGNISEAFGVYPDLNFI---------DLSHNKFN-G 431

Query: 371 AIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSS 428
            I S   ++ ++  L +S N+I   +PPE+ +   L  L LS N +  + P+AI  +L++
Sbjct: 432 EISSNWQKSPKLGALIMSNNNITGAIPPEIWNMKQLGELDLSANNLSGELPEAI-GNLTN 490

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           LS L+L+ N L      G   +  L+ LDLS N  S      F S   L E+ L R    
Sbjct: 491 LSRLRLNGNQLSGRVPAGISFLTNLESLDLSSNRFSSQIPQTFDSFLKLHEMNLSRNNFD 550

Query: 489 EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 538
                + +L QL  LDLS N L   IP    +L SL +L+LS NN+S   P
Sbjct: 551 GRIPGLTKLTQLTHLDLSHNQLDGEIPSQLSSLQSLDKLNLSHNNLSGFIP 601



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 197/449 (43%), Gaps = 54/449 (12%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFD 120
           DL N+  +  L +SHNKL+  +P+++G L  L  L +  N +   IP E+G+  +++   
Sbjct: 196 DLGNMEYMIDLELSHNKLTGSIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMISLA 255

Query: 121 CSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNN 178
            S N+L   +PSSLG   NL+      N IT  +P +L +   M  L++  N LT    +
Sbjct: 256 LSENKLTGSIPSSLGNLKNLTVLYLHQNYITGVIPPELGNMESMIDLELSQNNLTGSIPS 315

Query: 179 LIASWTMLTELIASKNLLNG-------------------------MPETIGSLSRLIRLD 213
              ++T L  L  S N L+G                         +P+ I    +L  + 
Sbjct: 316 SFGNFTKLKSLYLSYNHLSGAIPPGVANSSELTELQLAINNFSGFLPKNICKGGKLQFIA 375

Query: 214 LHQNRILS-IPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+ N +   IP S+  C SL    ++GN  +  +    G    L  +DL  N+       
Sbjct: 376 LYDNHLKGPIPKSLRDCKSLIRAKFVGNKFVGNISEAFGVYPDLNFIDLSHNKFNGEISS 435

Query: 272 ACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
             Q   +L  L +SNN+++G +PPEI  M  L +L L+ N L        +G  P  +  
Sbjct: 436 NWQKSPKLGALIMSNNNITGAIPPEIWNMKQLGELDLSANNL--------SGELPEAIGN 487

Query: 329 L----RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L    R RL  N+ S         +T    L ++S   S      S IP       ++ +
Sbjct: 488 LTNLSRLRLNGNQLSGRVPAGISFLTNLESLDLSSNRFS------SQIPQTFDSFLKLHE 541

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           ++LSRN+     P L+    L  L LS N++     + L+SL SL  L L +N L     
Sbjct: 542 MNLSRNNFDGRIPGLTKLTQLTHLDLSHNQLDGEIPSQLSSLQSLDKLNLSHNNLSGFIP 601

Query: 445 DGFKDIPMLQILDLSYNI--ASLPENPPF 471
             F+ +  L  +D+S N     LP+NP F
Sbjct: 602 TTFESMKALTFIDISNNKLEGPLPDNPAF 630



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 122/303 (40%), Gaps = 64/303 (21%)

Query: 243 SALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLR-LSVLDLSNNSLSG-LPPEIGKMTT 299
             +P + G L KL   DL +N L +E   E   L+ L  L LSNN L+G +P  IGK+  
Sbjct: 119 GTIPPQFGNLFKLIYFDLSTNHLTREIPPELGNLQNLKGLSLSNNKLAGSIPSSIGKLKN 178

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L L  N                   YL   +P            DL  M   + +  
Sbjct: 179 LTVLYLYKN-------------------YLTGVIPP-----------DLGNMEYMIDLEL 208

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDW 418
               L G    +IPS +     +T L L  N +   +PPEL +  S+ +L LS NK+   
Sbjct: 209 SHNKLTG----SIPSSLGNLKNLTVLYLHHNYLTGVIPPELGNMESMISLALSENKLTGS 264

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPH 476
             + L +L +L+ L L  N +  V      ++  +  L+LS N    S+P +  F +   
Sbjct: 265 IPSSLGNLKNLTVLYLHQNYITGVIPPELGNMESMIDLELSQNNLTGSIPSS--FGNFTK 322

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ LYL    L  A                      IP G  N + LTEL L+ NN S  
Sbjct: 323 LKSLYLSYNHLSGA----------------------IPPGVANSSELTELQLAINNFSGF 360

Query: 537 PPE 539
            P+
Sbjct: 361 LPK 363



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 8/177 (4%)

Query: 370 SAIPSEIWEAGEITKLDLSRNSI-QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
             IP +     ++   DLS N + +E+PPEL +  +L+ L LS NK+     + +  L +
Sbjct: 119 GTIPPQFGNLFKLIYFDLSTNHLTREIPPELGNLQNLKGLSLSNNKLAGSIPSSIGKLKN 178

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQ 486
           L+ L L  N L  V      ++  +  L+LS+N    S+P +    +L +L  LYL    
Sbjct: 179 LTVLYLYKNYLTGVIPPDLGNMEYMIDLELSHNKLTGSIPSS--LGNLKNLTVLYLHHNY 236

Query: 487 LREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPEL 540
           L    P ++  ++ +  L LS+N L  SIP    NL +LT L L  N I+  +PPEL
Sbjct: 237 LTGVIPPELGNMESMISLALSENKLTGSIPSSLGNLKNLTVLYLHQNYITGVIPPEL 293



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 28/243 (11%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSAT 114
           +  + E     P L  +++SHNK   E+ +   +   L +L +S N+I   IP EI +  
Sbjct: 406 VGNISEAFGVYPDLNFIDLSHNKFNGEISSNWQKSPKLGALIMSNNNITGAIPPEIWNMK 465

Query: 115 ALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKL 172
            L + D S+N L  ELP ++G   NLS  + + N ++  +P  ++  + +  LD+  N+ 
Sbjct: 466 QLGELDLSANNLSGELPEAIGNLTNLSRLRLNGNQLSGRVPAGISFLTNLESLDLSSNRF 525

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCS 231
           +        S+  L E+  S+N  +G    +  L++L  LDL  N++   IPS +S   S
Sbjct: 526 SSQIPQTFDSFLKLHEMNLSRNNFDGRIPGLTKLTQLTHLDLSHNQLDGEIPSQLSSLQS 585

Query: 232 LAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 290
           L +  + +N LS  +P     +  L                      + +D+SNN L G 
Sbjct: 586 LDKLNLSHNNLSGFIPTTFESMKAL----------------------TFIDISNNKLEGP 623

Query: 291 PPE 293
            P+
Sbjct: 624 LPD 626


>gi|353230339|emb|CCD76510.1| cell polarity protein [Schistosoma mansoni]
          Length = 1450

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 153/275 (55%), Gaps = 8/275 (2%)

Query: 47  LQKLILAHNNIEKLKE---DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           LQ L +++N ++ L      LRNL +L + ++S   ++ELP  IG L +L+ L++  N +
Sbjct: 110 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDIS---IAELPEEIGSLQLLEKLELRDNCL 166

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD       L   D  +N+ +EL   +G+   LS+    +N + SLP++L +   + 
Sbjct: 167 KSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQ 226

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L++ 
Sbjct: 227 QLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVT 285

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDL 282
            +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L L
Sbjct: 286 PTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSL 345

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 346 RENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 380



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 204/436 (46%), Gaps = 74/436 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I    R +  ++  +  L  VP++V +NF              L++  L  N I++L ++
Sbjct: 8   IGPCGRHTDHIDRRHSKLEQVPDDVIRNFRT------------LEECRLDANQIKELPKN 55

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM--KIPDEIGSATALVKFDC 121
              L  + +L +S N+L+ LP  IG    L  LD+S N ++  ++P  I    +L   D 
Sbjct: 56  SLRLTRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDV 115

Query: 122 SSNQLKELPSSLGR-------CLN----------------LSDFKASNNCITSLPEDLAD 158
           S+N L+ LP+   +       CLN                L   +  +NC+ S+P+  AD
Sbjct: 116 SNNPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFAD 175

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+   LS  +I   + L+EL    N L  +P+ +G+L  L +LDL +N 
Sbjct: 176 LIHLEFLDLGANEFQELS-PVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENL 234

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           I ++P SISG  SL++  +  N+++ LP  LG L KL  L L+ N+L           L+
Sbjct: 235 ISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRL-----------LT 283

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           V            P IG  ++L++L LT N L  L SS+ N     L+      + +N+ 
Sbjct: 284 VT-----------PTIGNCSSLQELYLTENFLSKLPSSIGN-----LVSMFHLNVDQNQL 327

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +E  +     I   T L++    LSL   NL  +P EI     +  LD+S N +  LP  
Sbjct: 328 TELPSE----IGQCTSLNI----LSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFS 379

Query: 399 LSSCASLQTLILSRNK 414
           LS C SL  L LS+N+
Sbjct: 380 LSRC-SLTALWLSQNQ 394



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 191/388 (49%), Gaps = 24/388 (6%)

Query: 156 LADCSKMS-KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           +  C + +  +D   +KL  + +++I ++  L E     N +  +P+    L+R+  L L
Sbjct: 8   IGPCGRHTDHIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKNSLRLTRIRLLTL 67

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
             N +  +P+ I    +L E  +  N +  + LPA +     L +LD+ +N L+      
Sbjct: 68  SDNELTRLPTGIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQSLPAGF 127

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           CQLR L VL L++ S++ LP EIG +  L KL L  N L+++  S  +     L+     
Sbjct: 128 CQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFAD-----LIHLEFL 182

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L  NE  E S     +I   ++LS    EL ++   L ++P E+   G + +LDLS N 
Sbjct: 183 DLGANEFQELSP----VIGQLSQLS----ELWIDDNELRSLPKELGNLGNLQQLDLSENL 234

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV-PSDGFKDI 450
           I  LP  +S   SL  L LS+N I   P+  L  L  L  LKL+ N L  V P+ G  + 
Sbjct: 235 ISTLPESISGLVSLSDLNLSQNSITHLPNG-LGDLDKLIILKLNQNRLLTVTPTIG--NC 291

Query: 451 PMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L L+ N  S LP +    +L  +  L + + QL E P++I +   L IL L +N+
Sbjct: 292 SSLQELYLTENFLSKLPSS--IGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENN 349

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALP 537
           L  +P+   N T L  LD+S N +  LP
Sbjct: 350 LHRLPDEIGNCTRLRVLDVSGNRLDRLP 377



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 7/151 (4%)

Query: 397 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P +  C      I  R+ K++  PD ++ +  +L   +LD N ++++P +  + +  +++
Sbjct: 6   PIIGPCGRHTDHIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKNSLR-LTRIRL 64

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRR--MQLREAPTDILRLQQLRILDLSQNSLQS 512
           L LS N +  LP      S  +L EL + R  M   E P  I     L+ LD+S N LQS
Sbjct: 65  LTLSDNELTRLPTG--IGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQS 122

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +P GF  L +L  L L+D +I+ LP E+ S+
Sbjct: 123 LPAGFCQLRNLRVLCLNDISIAELPEEIGSL 153


>gi|321460320|gb|EFX71363.1| hypothetical protein DAPPUDRAFT_60262 [Daphnia pulex]
          Length = 481

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 167/368 (45%), Gaps = 61/368 (16%)

Query: 14  LNLSNRSLRDVPNEVYKN--------FDEAGEGD---KWWEAVDLQKLILAHNNIEKLKE 62
           L+  + SL DVP EV+ +         D     D     +    L++L L+ N I  L  
Sbjct: 14  LDYEHSSLSDVPAEVFNHERTLEILRLDCNQIADLPRPLFHCHGLKELWLSDNEIALLPP 73

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD-------------- 108
            L +L  L VL+VS N L+E+P AI  L  L  LD+S N + K+P+              
Sbjct: 74  ALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGATKLLSLESLNLS 133

Query: 109 ---------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
                      G  T L   +   NQL  LP S+ R   L       N +  LPE +   
Sbjct: 134 DTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQNDLCDLPEVVGSI 193

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG--------------------- 198
             +++L V+GNKL VL    +     L  L AS+N L+G                     
Sbjct: 194 PSLTELWVDGNKLDVLP-EFVGHLQNLVHLDASRNCLHGIAPTIGLCKSLTDLSLTSNNL 252

Query: 199 --MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L+ L  L +  NR+  +P S+    +L E   G N LS LPA +G L KL 
Sbjct: 253 ANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIGLLRKLE 312

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           TL L+ N L+E  VE  +CQ RL+VL L  N L  LPPE+G ++ LR + L+ N L  L 
Sbjct: 313 TLMLNENLLEELPVELGSCQ-RLTVLSLRKNRLEHLPPEMGHLSRLRVVNLSCNRLLHLP 371

Query: 315 SSLVNGPT 322
            S +  P+
Sbjct: 372 VSFLKLPS 379



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 192/450 (42%), Gaps = 69/450 (15%)

Query: 93  LKSLDVSFNSIMKIPDEIGS---ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           ++ LD   +S+  +P E+ +      +++ DC  NQ+ +LP  L  C  L +   S+N I
Sbjct: 11  VQVLDYEHSSLSDVPAEVFNHERTLEILRLDC--NQIADLPRPLFHCHGLKELWLSDNEI 68

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
             LP  LA    +  LDV                        SKN L  +P+ I  L  L
Sbjct: 69  ALLPPALASLIHLQVLDV------------------------SKNSLTEVPDAISGLKAL 104

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           I LDL  N +  +P   +   SL    + +  L  LPA  G+L+KL  L+L  NQL    
Sbjct: 105 IILDLSVNPLGKLPEGATKLLSLESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLP 164

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
               +L  L  LD+  N L  LP  +G + +L +L + GN L  L         P  + +
Sbjct: 165 KSMARLTALKRLDMGQNDLCDLPEVVGSIPSLTELWVDGNKLDVL---------PEFVGH 215

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L++ +      +AS      I     L  +  +LSL   NL+ +P EI +   +T L + 
Sbjct: 216 LQNLV----HLDASRNCLHGIAPTIGLCKSLTDLSLTSNNLANLPEEIGDLTLLTVLRVD 271

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N +  LP  +   ++L+ L   +N++   P +I   L  L  L L+ N L ++P +   
Sbjct: 272 DNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASI-GLLRKLETLMLNENLLEELPVE--- 327

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
                                   S   L  L LR+ +L   P ++  L +LR+++LS N
Sbjct: 328 ----------------------LGSCQRLTVLSLRKNRLEHLPPEMGHLSRLRVVNLSCN 365

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L  +P  F  L SL+ L LS+     + P
Sbjct: 366 RLLHLPVSFLKLPSLSALWLSEAQTKPVVP 395



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 63/270 (23%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C++  +  + VLD  ++SLS +P E+     TL  L L  N +  L       P P    
Sbjct: 3   CLKPEEDDVQVLDYEHSSLSDVPAEVFNHERTLEILRLDCNQIADL-------PRPLFHC 55

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           +                               KEL L    ++ +P  +     +  LD+
Sbjct: 56  H-----------------------------GLKELWLSDNEIALLPPALASLIHLQVLDV 86

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+NS+ E+                       PDAI + L +L  L L  NPL ++P    
Sbjct: 87  SKNSLTEV-----------------------PDAI-SGLKALIILDLSVNPLGKLPEGAT 122

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           K + +  +      +  LP N  F  L  L+ L LR  QL   P  + RL  L+ LD+ Q
Sbjct: 123 KLLSLESLNLSDTFLEFLPAN--FGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQ 180

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           N L  +PE   ++ SLTEL +  N +  LP
Sbjct: 181 NDLCDLPEVVGSIPSLTELWVDGNKLDVLP 210


>gi|297681099|ref|XP_002818262.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pongo abelii]
          Length = 861

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 254/570 (44%), Gaps = 57/570 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N +  L 
Sbjct: 146 TVNLEAKGLQEFPRDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 205

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            +++ L  L +LNVSHN +S +P  I +L  ++ L    N I   P ++     L     
Sbjct: 206 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 265

Query: 122 SSNQLKELPSSLG-----RCLNLS------------------DFKASNNCITSLPEDLAD 158
             N+L+ +P +L      R LNL                       + N I+SLP+++ +
Sbjct: 266 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKE 325

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N 
Sbjct: 326 LKNLETLLLDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNL 384

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + SIP  IS C  L    + +N L+ LP  + KL  L  L ++ N + +       L  +
Sbjct: 385 LKSIPEKISCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNNI 444

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++G+P EI     + K+ L+ N +      L    +   L YL        
Sbjct: 445 CSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYL-------- 493

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSRNSIQEL 395
               S +   +  +   +S + + L LE   N   I SE +     +  LDL +N I+++
Sbjct: 494 ----SVSGNCISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKI 549

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q 
Sbjct: 550 PASISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQK 607

Query: 456 LDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           L+ S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ I
Sbjct: 608 LNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI 667

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P     L +L  L   +N IS LPP L+S+
Sbjct: 668 PRNIGELRNLVSLHAYNNQISYLPPSLLSL 697



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 250/557 (44%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE    DL  L  L +L
Sbjct: 217 LNVSHNHISHIPKEI----SQLG---------NIRQLFFYNNYIENFPSDLECLGNLEIL 263

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  +P  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 264 SLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 323

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    K+ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 324 KELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHK-IENFRELRILILDK 382

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L  L +L +++N ++ I  SIS   
Sbjct: 383 NLLKSIPEKISCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLN 442

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N++  + +  C L  L  L +S N +S 
Sbjct: 443 NICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVSGNCISE 502

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L+ N L        SL+N      L+YL   L +N+  +   +  
Sbjct: 503 IPVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LQYLD--LGKNQIKKIPASIS 554

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++   +   +K            P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 555 NMISLHVLILCCNK--------FETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ 606

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L  S N+   +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I 
Sbjct: 607 KLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIR 665

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL
Sbjct: 666 EIPRN--IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSL 723

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 724 KEINFDDNPLLRPPMEI 740



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 185/409 (45%), Gaps = 43/409 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L  L+ L V+ N+++K
Sbjct: 374 ELRILILDKNLLKSIPEKISCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVK 433

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  +   + S N I   P  L     +  L
Sbjct: 434 ITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYL 493

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 494 SVSGNCISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKIPAS 552

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 553 ISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSS 612

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 613 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 667

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 668 ----PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 718

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
               + +++   N +   P E+     L T+     +  +  + IL  +
Sbjct: 719 NLFSLKEINFDDNPLLRPPMEICKGKQLYTIACYLQRADERDEKILEKI 767



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +   ++LQ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD+
Sbjct: 528 EHFCSLINLQYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDL 587

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLP 153
           S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T LP
Sbjct: 588 SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRLP 645

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L+
Sbjct: 646 GELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLN 704

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 705 LSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 749


>gi|335295357|ref|XP_003130183.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sus scrofa]
          Length = 855

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 251/557 (45%), Gaps = 61/557 (10%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LN+S+  +  +P E+     + G         ++++L L +N IE     L +L  L +
Sbjct: 211 TLNVSHNQISHIPKEL----SQLG---------NIRQLFLNNNCIEGSPSGLESLGNLEI 257

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN++ NKL  +P  +  L  L+ L++ +N +   P  +     L+  + + N +  LP  
Sbjct: 258 LNLAKNKLRHIPDTLSSLKKLRGLNLEYNQLTIFPKALCFLPKLISLNLTGNLISSLPKE 317

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           +    NL      +N +T L  ++    +M +L +  NKL V+S+ +             
Sbjct: 318 IKELKNLEKLLLDHNKLTFLAVEIFRLLRMKELQLTDNKLEVISHKIENFRELRILVLDK 377

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I+   ML  L  S N L  +P+ I  L  L +L +++N I+ IP  IS   
Sbjct: 378 NLLKDVPENISHCVMLEFLSLSDNKLTELPKNIHKLKNLRKLHINRNNIIKIPEDISHLN 437

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           ++       N ++  P E+    K+  ++L  N++  + +  C L  L  L  + N +S 
Sbjct: 438 NMFSLEFAGNIITDFPIEIKNCRKITKVELSYNKIIYFPLGLCALESLYYLSFNGNYISE 497

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L    N L        SL+N      L+YL   L +N+  +   +  
Sbjct: 498 IPEDISFSKQLLHLEFNENKLLIFSEHLCSLIN------LEYL--DLGKNKIKKIPPSIS 549

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +++++   +   +K        L   P E+     +  LDLS N IQ +PPE+ +   +Q
Sbjct: 550 NMVSLHVLILCCNK--------LETFPIEVCTLENLQVLDLSENQIQNIPPEICNLKGIQ 601

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L +S N+   +P  +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I 
Sbjct: 602 KLNISSNQFIYFPIELCQLQSLEELNISQINGRKLTRLPEE-LCNMIQLKELDISNNAIR 660

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P +     L  L  L     Q+R  P   L L  L+ L+LS N+L ++P G  NL SL
Sbjct: 661 EMPRS--IGELRSLVSLKAYNNQIRYLPPSXLSLNALQQLNLSGNNLTALPSGIYNLFSL 718

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 719 KEINFDDNPLLRPPMEI 735



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 260/550 (47%), Gaps = 52/550 (9%)

Query: 13  SLNLSNRSLRDVPNEVYK-NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE-DLRNLPLL 70
           ++NL  + L++ P ++ K N+              ++ L L  N I+  K  D  +L  L
Sbjct: 141 TVNLKAKGLQEFPKDILKTNY--------------VKYLNLDENKIKSFKGVDPSDLLGL 186

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            +L++  N LS LP+ I  LH LK+L+VS N I  IP E+     + +   ++N ++  P
Sbjct: 187 EILSMKENGLSSLPSEIQLLHNLKTLNVSHNQISHIPKELSQLGNIRQLFLNNNCIEGSP 246

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           S L    NL     + N +  +P+ L+   K+  L++E N+LT+    L      L +LI
Sbjct: 247 SGLESLGNLEILNLAKNKLRHIPDTLSSLKKLRGLNLEYNQLTIFPKAL----CFLPKLI 302

Query: 191 A---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +   + NL++ +P+ I  L  L +L L  N++  +   I     + E  + +N L  +  
Sbjct: 303 SLNLTGNLISSLPKEIKELKNLEKLLLDHNKLTFLAVEIFRLLRMKELQLTDNKLEVISH 362

Query: 248 ELGKLSKLGTLDLHSNQLKE------YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++    +L  L L  N LK+      +CV      L  L LS+N L+ LP  I K+  LR
Sbjct: 363 KIENFRELRILVLDKNLLKDVPENISHCV-----MLEFLSLSDNKLTELPKNIHKLKNLR 417

Query: 302 KLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL---ITMATRL 355
           KL +  N +  +    S L N  +      + +  P    +    TK +L     +   L
Sbjct: 418 KLHINRNNIIKIPEDISHLNNMFSLEFAGNIITDFPIEIKNCRKITKVELSYNKIIYFPL 477

Query: 356 SVTSKE----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            + + E    LS  G  +S IP +I  + ++  L+ + N +      L S  +L+ L L 
Sbjct: 478 GLCALESLYYLSFNGNYISEIPEDISFSKQLLHLEFNENKLLIFSEHLCSLINLEYLDLG 537

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
           +NKIK  P +I +++ SL  L L  N L   P +    +  LQ+LDLS N I ++P  P 
Sbjct: 538 KNKIKKIPPSI-SNMVSLHVLILCCNKLETFPIE-VCTLENLQVLDLSENQIQNIP--PE 593

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ---NSLQSIPEGFKNLTSLTELD 527
             +L  +Q+L +   Q    P ++ +LQ L  L++SQ     L  +PE   N+  L ELD
Sbjct: 594 ICNLKGIQKLNISSNQFIYFPIELCQLQSLEELNISQINGRKLTRLPEELCNMIQLKELD 653

Query: 528 LSDNNISALP 537
           +S+N I  +P
Sbjct: 654 ISNNAIREMP 663



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L+ L L  N I+K+   + N+  L VL +  NKL   P  +  L  L+ LD+S N I 
Sbjct: 529 INLEYLDLGKNKIKKIPPSISNMVSLHVLILCCNKLETFPIEVCTLENLQVLDLSENQIQ 588

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN---NCITSLPEDLADCSK 161
            IP EI +   + K + SSNQ    P  L +  +L +   S      +T LPE+L +  +
Sbjct: 589 NIPPEICNLKGIQKLNISSNQFIYFPIELCQLQSLEELNISQINGRKLTRLPEELCNMIQ 648

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +LD+  N +  +  + I     L  L A  N +  +P +  SL+ L +L+L  N + +
Sbjct: 649 LKELDISNNAIREMPRS-IGELRSLVSLKAYNNQIRYLPPSXLSLNALQQLNLSGNNLTA 707

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 708 LPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 744


>gi|115460588|ref|NP_001053894.1| Os04g0618700 [Oryza sativa Japonica Group]
 gi|113565465|dbj|BAF15808.1| Os04g0618700 [Oryza sativa Japonica Group]
          Length = 1183

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 230/493 (46%), Gaps = 75/493 (15%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI- 103
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 340 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 399

Query: 104 MKIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 400 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 459

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 460 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 519

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 520 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 579

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L    +  + G   A +  ++  L  
Sbjct: 580 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRL----AGAIPGAVIASMSNVQMYL-- 633

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A T                           AIP+EI     +  +DLS N +   
Sbjct: 634 NLSNNAFT--------------------------GAIPAEIGGLVMVQTIDLSNNQLSGG 667

Query: 395 LPPELSSCASLQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPL-RQVPSDGFKDIPM 452
           +P  L+ C +L +L LS N +  + P  +   L  L+ L +  N L  ++P+D       
Sbjct: 668 VPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPAD------- 720

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ 511
                              ++L H+Q L + R     A P  +  L  LR L+LS N+ +
Sbjct: 721 ------------------IAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFE 762

Query: 512 S-IPEG--FKNLT 521
             +P+G  F+NLT
Sbjct: 763 GPVPDGGVFRNLT 775



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 231/543 (42%), Gaps = 81/543 (14%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFD 120
           DL NL    +L +  N+ S  +P  +G    L  L++  N    +IP E+G  T L    
Sbjct: 240 DLSNL---QILQLYENRFSGHIPRELGRCKNLTLLNIFSNGFTGEIPGELGELTNLEVMR 296

Query: 121 CSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNN 178
              N L  E+P SL RC++L +   S N +   +P +L +   + +L +  N+L      
Sbjct: 297 LYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPA 356

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFY 236
            + +   LT L  S+N L+G +P +IGSL  L RL +  N +   IP+SIS C  LA   
Sbjct: 357 SLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANAS 416

Query: 237 MGNNALSA-LPAELGKLSKLGTLDLHSNQLK----EYCVEACQLR--------------- 276
           M  N  S  LPA LG+L  L  L L  N L     +   +  QL+               
Sbjct: 417 MSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSR 476

Query: 277 -------LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLK 327
                  L+VL L  N+LSG +P EIG MT L  L L  N     + +S+ N  +  LL 
Sbjct: 477 LVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLD 536

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RL     +E    ++      T L   S   +        IP  +     ++ LDL
Sbjct: 537 LGHNRLDGVFPAEVFELRQ-----LTILGAGSNRFA------GPIPDAVANLRSLSFLDL 585

Query: 388 SRNSIQ-ELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSC-LKLDNNPLRQVPS 444
           S N +   +P  L     L TL LS N++    P A++ S+S++   L L NN       
Sbjct: 586 SSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIP 645

Query: 445 DGFKDIPMLQILDLSYN--------------------------IASLPENPPFSSLPHLQ 478
                + M+Q +DLS N                             LP N  F  L  L 
Sbjct: 646 AEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTGELPANL-FPQLDLLT 704

Query: 479 ELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISAL 536
            L +    L  E P DI  L+ ++ LD+S+N+   +IP    NLT+L  L+LS N     
Sbjct: 705 TLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFEGP 764

Query: 537 PPE 539
            P+
Sbjct: 765 VPD 767



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 241/530 (45%), Gaps = 63/530 (11%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 147 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 206

Query: 104 -MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 207 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 266

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 267 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 303

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 304 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 363

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 364 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 423

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           GP PA L  L+S   L   ++S A    +DL        +   E S  G     +   + 
Sbjct: 424 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTG----GLSRLVG 479

Query: 378 EAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           + G +T L L  N++  E+P E+ +   L +L L RN+      A ++++SSL  L L +
Sbjct: 480 QLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGH 539

Query: 437 NPLRQV-PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDI 494
           N L  V P++ F ++  L IL    N  + P     ++L  L  L L    L    P  +
Sbjct: 540 NRLDGVFPAEVF-ELRQLTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAAL 598

Query: 495 LRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTE--LDLSDNNIS-ALPPEL 540
            RL QL  LDLS N L  +IP       S  +  L+LS+N  + A+P E+
Sbjct: 599 GRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIPAEI 648



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 206/491 (41%), Gaps = 93/491 (18%)

Query: 64  LRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           L N+  L V++++ N  +  +P  +G L  L+ L VS N     IP  + + +A+     
Sbjct: 118 LGNISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALAL 177

Query: 122 SSNQL-KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + N L   +PS +G   NL  F+A  NN    LP  +A    +  +D+  N+L+      
Sbjct: 178 NVNNLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLS------ 231

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
                              +P  IG LS L  L L++NR    IP  +  C +L    + 
Sbjct: 232 -----------------GSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCKNLTLLNIF 274

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL--DLSNNSLSG-LPPEI 294
           +N  +  +P ELG+L+ L  + L+ N L      + +  +S+L  DLS N L+G +PPE+
Sbjct: 275 SNGFTGEIPGELGELTNLEVMRLYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPEL 334

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++ +L++L L  N L         G  PA L                    +L+ + T 
Sbjct: 335 GELPSLQRLSLHANRLA--------GTVPASLT-------------------NLVNL-TI 366

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 413
           L ++   LS        +P+ I     + +L +  NS+  ++P  +S+C  L    +S N
Sbjct: 367 LELSENHLS------GPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFN 420

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
                  A L  L SL  L L  N L   +P D F D   LQ LDLS       EN    
Sbjct: 421 LFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLF-DCGQLQKLDLS-------ENSFTG 472

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDN 531
            L  L                + +L  L +L L  N+L   IPE   N+T L  L L  N
Sbjct: 473 GLSRL----------------VGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRN 516

Query: 532 NISALPPELVS 542
             +   P  +S
Sbjct: 517 RFAGHVPASIS 527



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 63/332 (18%)

Query: 39  DKWWEAVDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSL 96
           D  ++   LQKL L+ N+    L   +  L  LTVL +  N LS E+P  IG +  L SL
Sbjct: 452 DDLFDCGQLQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISL 511

Query: 97  DVSFNSIM-KIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LP 153
            +  N     +P  I + ++L   D   N+L    P+ +     L+   A +N     +P
Sbjct: 512 KLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIP 571

Query: 154 EDLADCSKMSKLDVEGNKL--TV--------------LSNNLIASWTMLTELIAS----- 192
           + +A+   +S LD+  N L  TV              LS+N +A   +   +IAS     
Sbjct: 572 DAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAG-AIPGAVIASMSNVQ 630

Query: 193 ------KNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA 244
                  N   G +P  IG L  +  +DL  N++   +P++++GC +L    +  N+L+ 
Sbjct: 631 MYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTG 690

Query: 245 --------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
                                     +PA++  L  + TLD+  N        A      
Sbjct: 691 ELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTA 750

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 751 LRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGN 782


>gi|125591656|gb|EAZ32006.1| hypothetical protein OsJ_16186 [Oryza sativa Japonica Group]
          Length = 1174

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 230/493 (46%), Gaps = 75/493 (15%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI- 103
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 104 MKIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L    +  + G   A +  ++  L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRL----AGAIPGAVIASMSNVQMYL-- 624

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A T                           AIP+EI     +  +DLS N +   
Sbjct: 625 NLSNNAFT--------------------------GAIPAEIGGLVMVQTIDLSNNQLSGG 658

Query: 395 LPPELSSCASLQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPL-RQVPSDGFKDIPM 452
           +P  L+ C +L +L LS N +  + P  +   L  L+ L +  N L  ++P+D       
Sbjct: 659 VPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPAD------- 711

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ 511
                              ++L H+Q L + R     A P  +  L  LR L+LS N+ +
Sbjct: 712 ------------------IAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFE 753

Query: 512 S-IPEG--FKNLT 521
             +P+G  F+NLT
Sbjct: 754 GPVPDGGVFRNLT 766



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 231/543 (42%), Gaps = 81/543 (14%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFD 120
           DL NL    +L +  N+ S  +P  +G    L  L++  N    +IP E+G  T L    
Sbjct: 231 DLSNL---QILQLYENRFSGHIPRELGRCKNLTLLNIFSNGFTGEIPGELGELTNLEVMR 287

Query: 121 CSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNN 178
              N L  E+P SL RC++L +   S N +   +P +L +   + +L +  N+L      
Sbjct: 288 LYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPA 347

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFY 236
            + +   LT L  S+N L+G +P +IGSL  L RL +  N +   IP+SIS C  LA   
Sbjct: 348 SLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANAS 407

Query: 237 MGNNALSA-LPAELGKLSKLGTLDLHSNQLK----EYCVEACQLR--------------- 276
           M  N  S  LPA LG+L  L  L L  N L     +   +  QL+               
Sbjct: 408 MSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSR 467

Query: 277 -------LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLK 327
                  L+VL L  N+LSG +P EIG MT L  L L  N     + +S+ N  +  LL 
Sbjct: 468 LVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLD 527

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RL     +E    ++      T L   S   +        IP  +     ++ LDL
Sbjct: 528 LGHNRLDGVFPAEVFELRQ-----LTILGAGSNRFA------GPIPDAVANLRSLSFLDL 576

Query: 388 SRNSIQ-ELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSC-LKLDNNPLRQVPS 444
           S N +   +P  L     L TL LS N++    P A++ S+S++   L L NN       
Sbjct: 577 SSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIP 636

Query: 445 DGFKDIPMLQILDLSYN--------------------------IASLPENPPFSSLPHLQ 478
                + M+Q +DLS N                             LP N  F  L  L 
Sbjct: 637 AEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTGELPANL-FPQLDLLT 695

Query: 479 ELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISAL 536
            L +    L  E P DI  L+ ++ LD+S+N+   +IP    NLT+L  L+LS N     
Sbjct: 696 TLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFEGP 755

Query: 537 PPE 539
            P+
Sbjct: 756 VPD 758



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 241/530 (45%), Gaps = 63/530 (11%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           GP PA L  L+S   L   ++S A    +DL        +   E S  G     +   + 
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTG----GLSRLVG 470

Query: 378 EAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           + G +T L L  N++  E+P E+ +   L +L L RN+      A ++++SSL  L L +
Sbjct: 471 QLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGH 530

Query: 437 NPLRQV-PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDI 494
           N L  V P++ F ++  L IL    N  + P     ++L  L  L L    L    P  +
Sbjct: 531 NRLDGVFPAEVF-ELRQLTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAAL 589

Query: 495 LRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTE--LDLSDNNIS-ALPPEL 540
            RL QL  LDLS N L  +IP       S  +  L+LS+N  + A+P E+
Sbjct: 590 GRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIPAEI 639



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 206/491 (41%), Gaps = 93/491 (18%)

Query: 64  LRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           L N+  L V++++ N  +  +P  +G L  L+ L VS N     IP  + + +A+     
Sbjct: 109 LGNISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALAL 168

Query: 122 SSNQL-KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + N L   +PS +G   NL  F+A  NN    LP  +A    +  +D+  N+L+      
Sbjct: 169 NVNNLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLS------ 222

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
                              +P  IG LS L  L L++NR    IP  +  C +L    + 
Sbjct: 223 -----------------GSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCKNLTLLNIF 265

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL--DLSNNSLSG-LPPEI 294
           +N  +  +P ELG+L+ L  + L+ N L      + +  +S+L  DLS N L+G +PPE+
Sbjct: 266 SNGFTGEIPGELGELTNLEVMRLYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPEL 325

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++ +L++L L  N L         G  PA L                    +L+ + T 
Sbjct: 326 GELPSLQRLSLHANRLA--------GTVPASLT-------------------NLVNL-TI 357

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 413
           L ++   LS        +P+ I     + +L +  NS+  ++P  +S+C  L    +S N
Sbjct: 358 LELSENHLS------GPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFN 411

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
                  A L  L SL  L L  N L   +P D F D   LQ LDLS       EN    
Sbjct: 412 LFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLF-DCGQLQKLDLS-------ENSFTG 463

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDN 531
            L  L                + +L  L +L L  N+L   IPE   N+T L  L L  N
Sbjct: 464 GLSRL----------------VGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRN 507

Query: 532 NISALPPELVS 542
             +   P  +S
Sbjct: 508 RFAGHVPASIS 518



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 63/332 (18%)

Query: 39  DKWWEAVDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSL 96
           D  ++   LQKL L+ N+    L   +  L  LTVL +  N LS E+P  IG +  L SL
Sbjct: 443 DDLFDCGQLQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISL 502

Query: 97  DVSFNSIM-KIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LP 153
            +  N     +P  I + ++L   D   N+L    P+ +     L+   A +N     +P
Sbjct: 503 KLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIP 562

Query: 154 EDLADCSKMSKLDVEGNKL--TV--------------LSNNLIASWTMLTELIAS----- 192
           + +A+   +S LD+  N L  TV              LS+N +A   +   +IAS     
Sbjct: 563 DAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAG-AIPGAVIASMSNVQ 621

Query: 193 ------KNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA 244
                  N   G +P  IG L  +  +DL  N++   +P++++GC +L    +  N+L+ 
Sbjct: 622 MYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTG 681

Query: 245 --------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
                                     +PA++  L  + TLD+  N        A      
Sbjct: 682 ELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTA 741

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 742 LRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGN 773


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEIEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEIEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|38344325|emb|CAE02151.2| OSJNBa0058K23.7 [Oryza sativa Japonica Group]
          Length = 1174

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 230/493 (46%), Gaps = 75/493 (15%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI- 103
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 104 MKIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L    +  + G   A +  ++  L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRL----AGAIPGAVIASMSNVQMYL-- 624

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A T                           AIP+EI     +  +DLS N +   
Sbjct: 625 NLSNNAFT--------------------------GAIPAEIGGLVMVQTIDLSNNQLSGG 658

Query: 395 LPPELSSCASLQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPL-RQVPSDGFKDIPM 452
           +P  L+ C +L +L LS N +  + P  +   L  L+ L +  N L  ++P+D       
Sbjct: 659 VPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPAD------- 711

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ 511
                              ++L H+Q L + R     A P  +  L  LR L+LS N+ +
Sbjct: 712 ------------------IAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFE 753

Query: 512 S-IPEG--FKNLT 521
             +P+G  F+NLT
Sbjct: 754 GPVPDGGVFRNLT 766



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 231/543 (42%), Gaps = 81/543 (14%)

Query: 63  DLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFD 120
           DL NL    +L +  N+ S  +P  +G    L  L++  N    +IP E+G  T L    
Sbjct: 231 DLSNL---QILQLYENRFSGHIPRELGRCKNLTLLNIFSNGFTGEIPGELGELTNLEVMR 287

Query: 121 CSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNN 178
              N L  E+P SL RC++L +   S N +   +P +L +   + +L +  N+L      
Sbjct: 288 LYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPA 347

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFY 236
            + +   LT L  S+N L+G +P +IGSL  L RL +  N +   IP+SIS C  LA   
Sbjct: 348 SLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANAS 407

Query: 237 MGNNALSA-LPAELGKLSKLGTLDLHSNQLK----EYCVEACQLR--------------- 276
           M  N  S  LPA LG+L  L  L L  N L     +   +  QL+               
Sbjct: 408 MSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSR 467

Query: 277 -------LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLK 327
                  L+VL L  N+LSG +P EIG MT L  L L  N     + +S+ N  +  LL 
Sbjct: 468 LVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLD 527

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +RL     +E    ++      T L   S   +        IP  +     ++ LDL
Sbjct: 528 LGHNRLDGVFPAEVFELRQ-----LTILGAGSNRFA------GPIPDAVANLRSLSFLDL 576

Query: 388 SRNSIQ-ELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSC-LKLDNNPLRQVPS 444
           S N +   +P  L     L TL LS N++    P A++ S+S++   L L NN       
Sbjct: 577 SSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIP 636

Query: 445 DGFKDIPMLQILDLSYN--------------------------IASLPENPPFSSLPHLQ 478
                + M+Q +DLS N                             LP N  F  L  L 
Sbjct: 637 AEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTGELPANL-FPQLDLLT 695

Query: 479 ELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISAL 536
            L +    L  E P DI  L+ ++ LD+S+N+   +IP    NLT+L  L+LS N     
Sbjct: 696 TLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFEGP 755

Query: 537 PPE 539
            P+
Sbjct: 756 VPD 758



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 241/530 (45%), Gaps = 63/530 (11%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           GP PA L  L+S   L   ++S A    +DL        +   E S  G     +   + 
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTG----GLSRLVG 470

Query: 378 EAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           + G +T L L  N++  E+P E+ +   L +L L RN+      A ++++SSL  L L +
Sbjct: 471 QLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGH 530

Query: 437 NPLRQV-PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDI 494
           N L  V P++ F ++  L IL    N  + P     ++L  L  L L    L    P  +
Sbjct: 531 NRLDGVFPAEVF-ELRQLTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAAL 589

Query: 495 LRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTE--LDLSDNNIS-ALPPEL 540
            RL QL  LDLS N L  +IP       S  +  L+LS+N  + A+P E+
Sbjct: 590 GRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIPAEI 639



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 206/491 (41%), Gaps = 93/491 (18%)

Query: 64  LRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           L N+  L V++++ N  +  +P  +G L  L+ L VS N     IP  + + +A+     
Sbjct: 109 LGNISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALAL 168

Query: 122 SSNQL-KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + N L   +PS +G   NL  F+A  NN    LP  +A    +  +D+  N+L+      
Sbjct: 169 NVNNLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLS------ 222

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
                              +P  IG LS L  L L++NR    IP  +  C +L    + 
Sbjct: 223 -----------------GSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCKNLTLLNIF 265

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL--DLSNNSLSG-LPPEI 294
           +N  +  +P ELG+L+ L  + L+ N L      + +  +S+L  DLS N L+G +PPE+
Sbjct: 266 SNGFTGEIPGELGELTNLEVMRLYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPEL 325

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++ +L++L L  N L         G  PA L                    +L+ + T 
Sbjct: 326 GELPSLQRLSLHANRLA--------GTVPASLT-------------------NLVNL-TI 357

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 413
           L ++   LS        +P+ I     + +L +  NS+  ++P  +S+C  L    +S N
Sbjct: 358 LELSENHLS------GPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFN 411

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFS 472
                  A L  L SL  L L  N L   +P D F D   LQ LDLS       EN    
Sbjct: 412 LFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLF-DCGQLQKLDLS-------ENSFTG 463

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDN 531
            L  L                + +L  L +L L  N+L   IPE   N+T L  L L  N
Sbjct: 464 GLSRL----------------VGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRN 507

Query: 532 NISALPPELVS 542
             +   P  +S
Sbjct: 508 RFAGHVPASIS 518



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 63/332 (18%)

Query: 39  DKWWEAVDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSL 96
           D  ++   LQKL L+ N+    L   +  L  LTVL +  N LS E+P  IG +  L SL
Sbjct: 443 DDLFDCGQLQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISL 502

Query: 97  DVSFNSIM-KIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LP 153
            +  N     +P  I + ++L   D   N+L    P+ +     L+   A +N     +P
Sbjct: 503 KLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIP 562

Query: 154 EDLADCSKMSKLDVEGNKL--TV--------------LSNNLIASWTMLTELIAS----- 192
           + +A+   +S LD+  N L  TV              LS+N +A   +   +IAS     
Sbjct: 563 DAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAG-AIPGAVIASMSNVQ 621

Query: 193 ------KNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA 244
                  N   G +P  IG L  +  +DL  N++   +P++++GC +L    +  N+L+ 
Sbjct: 622 MYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTG 681

Query: 245 --------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
                                     +PA++  L  + TLD+  N        A      
Sbjct: 682 ELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTA 741

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 742 LRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGN 773


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 194/433 (44%), Gaps = 76/433 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   L  
Sbjct: 26  TLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQSLHK 73

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +LP  
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG 133

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + LNL+    ++  +  LP +    +K+  L++  N+L +L                 
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML----------------- 176

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +G L
Sbjct: 177 -------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSL 229

Query: 253 SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  N L
Sbjct: 230 KQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+                              LI++        +EL      + 
Sbjct: 289 MYLPDSIGG----------------------------LISV--------EELDCSFNEVE 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           A+PS I E   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  +  L 
Sbjct: 313 ALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQKLK 371

Query: 431 CLKLDNNPLRQVP 443
            + L +N L+ +P
Sbjct: 372 VINLSDNRLKNLP 384



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEEAVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GLLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404


>gi|167376881|ref|XP_001734192.1| leucine-rich repeat containing protein [Entamoeba dispar SAW760]
 gi|165904420|gb|EDR29643.1| leucine-rich repeat containing protein, putative [Entamoeba dispar
           SAW760]
          Length = 861

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 234/530 (44%), Gaps = 74/530 (13%)

Query: 75  VSHNK-LSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V H K L+E P      E+  +  +DVS N I +IP +I S   L KF  + N +K LPS
Sbjct: 10  VKHAKNLTEFPQEEVKKEIKTVVLIDVSMNRIQEIPSQINSIAKLQKFRGNDNMIKTLPS 69

Query: 132 SLG---------------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +                      +  +L++   S N IT + +D      +  +D+  N
Sbjct: 70  QINIPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSIN 129

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  +  +L +  T LT +  S NLL   P  +  LS LI L + +N+I +IP+ +S   
Sbjct: 130 RIQSVPKHL-SKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMS 188

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L    + NN +  +   L KL+KL  LD+ +N + E   +   L  +  +D+S + L  
Sbjct: 189 NLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKT 248

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPE 335
           LP     +  LRKL        TL+ + V  P   L K+ +              + LP 
Sbjct: 249 LPKSFMSLVGLRKL--------TLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 336 NEDSEASTTK------EDLITMATRLSVTS---------------KELSLEGMNLSAIPS 374
           + D + S  +       D+     +L++                 K L L+   L +IP 
Sbjct: 301 SGDIDLSCNQIIELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E++    +T LDLS NS    P  +++C +L  L +S N +   PD      + L  L L
Sbjct: 361 EMFTGSSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYNCFAKLEALLL 420

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N + ++P +   ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P  
Sbjct: 421 GINIIDRLP-ETMSELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEK 477

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  L IL+LS N ++ I     NL  + +LDLS N I   P +L  +
Sbjct: 478 FSLLTNLEILELSCNYIKEITP-IVNLVGIKDLDLSTNQIEKCPSDLCGM 526



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 189/420 (45%), Gaps = 60/420 (14%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L +  N I  +   +  +  L +L++S+NK+ ++  ++ +L  L  LDVS N I +I D+
Sbjct: 170 LKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQ 229

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-- 167
           I + T + + D S + LK LP S    + L      +  +   P  L   +K+S+L++  
Sbjct: 230 IQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSN 289

Query: 168 -EGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            E  K+T L  S ++  S   + EL         +P+   S+    +L+L QNR+   P 
Sbjct: 290 GEFEKVTELPCSGDIDLSCNQIIEL--------DLPDMEYSIH---KLNLGQNRLKDFP- 337

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           +I     +    +  N L ++P E+   S L  LDL SN    +   +  C   L VL++
Sbjct: 338 NIKCLREIKTLILQKNMLGSIPLEMFTGSSLTALDLSSNSFNAFPMSITTCT-NLVVLNM 396

Query: 283 SNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           SNN L  LP         L  LLL  N +                     RLPE      
Sbjct: 397 SNNYLDSLPDISYNCFAKLEALLLGINII--------------------DRLPE------ 430

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                   TM+   ++T+  L LE   LS IP  ++   ++ +L L+ N I ELP + S 
Sbjct: 431 --------TMSELTNLTT--LHLEHNKLSKIPESLFSMTKLVELFLNCNQIPELPEKFSL 480

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L+ L LS N IK+    +  +L  +  L L  N + + PSD    +  L+ LDLSYN
Sbjct: 481 LTNLEILELSCNYIKEITPIV--NLVGIKDLDLSTNQIEKCPSD-LCGMTSLRSLDLSYN 537



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 30/186 (16%)

Query: 358 TSKELSLEGMNLSAIPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           T  ++     NL+  P E    E   +  +D+S N IQE+P +++S A LQ    + N I
Sbjct: 5   TETKIVKHAKNLTEFPQEEVKKEIKTVVLIDVSMNRIQEIPSQINSIAKLQKFRGNDNMI 64

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           K  P  I                          +IP L+ LDLS N   L        L 
Sbjct: 65  KTLPSQI--------------------------NIPSLKTLDLSSN--HLKRFCKSIKLT 96

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L E+ L   Q+ +   D   L  LR +DLS N +QS+P+    LTSLT +D+S+N +++
Sbjct: 97  SLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTS 156

Query: 536 LPPELV 541
            P  L+
Sbjct: 157 FPTPLL 162


>gi|313227075|emb|CBY22222.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 36/348 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILA 53
            K  R   S   ++  L  VP EVY++     E             ++++ V+L+KL L+
Sbjct: 12  FKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLS 71

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N++  L +++  L  L  L++S N L  +P  I  L +L+S+D S N + +IP+ + + 
Sbjct: 72  DNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +L     ++  L+  P + G    L   +A  N + +LPE + +   +  LD+  N++T
Sbjct: 132 ASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEIT 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L        + L EL    N L  +PE+IG L  L   D  +N++  IP SIS C +++
Sbjct: 192 KLPEKF-GKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNIS 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVE---------------- 271
              +  N LS LP  +G L KL  L + +N+L E       CV                 
Sbjct: 251 VLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPE 310

Query: 272 --ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             AC  RL VL+L  N ++ LP +IGK   LR L L  N L  +  ++
Sbjct: 311 SVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETI 358



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L    N +  L E +  LP L  L++  N++++LP   G+L  L  L +  N +  +
Sbjct: 157 LETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSL 216

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L   D + N+L+++P S+  C+N+S      N ++ LP  +    K+S+L 
Sbjct: 217 PESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELT 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ NKL  L+ + I     LTELI ++NL+  +PE++  L RL  L+L +NRI  +P  I
Sbjct: 277 VDNNKLCELTES-IGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKI 335

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L   ++  N L  +P  +G L  L TLD+  N+L        QL +  + LS N 
Sbjct: 336 GKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLSANQ 395

Query: 287 LSGL 290
              L
Sbjct: 396 AQPL 399



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 44/363 (12%)

Query: 219 ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           + S+P  +     SL E  +G+N +  LP +  KL  L  L+L  N L     E  QL +
Sbjct: 28  LASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSK 87

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------ 330
           L  LDLS N L  +P  I  +  L  +  + NP+  +  ++VN    A LK+L+      
Sbjct: 88  LVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL---ASLKHLKINAISL 144

Query: 331 SRLPENEDS----EASTTKEDLITM--------------------ATRLSVTSKELS--- 363
            R PEN       E    +E+++                       T+L     +LS   
Sbjct: 145 ERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLL 204

Query: 364 ---LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
              ++  +L+++P  I     +T  D ++N ++++P  +S+C ++  L L  N +   P 
Sbjct: 205 ELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPH 264

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           +I  SL  LS L +DNN L ++     + + + +++     I  LPE+   + L  L  L
Sbjct: 265 SI-GSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPES--VACLCRLGVL 321

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L R ++   P  I + + LR+L L +N L+ IPE   +L +L  LD++ N +  LP  L
Sbjct: 322 NLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSL 381

Query: 541 VSV 543
           + +
Sbjct: 382 LQL 384



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D     V++  L L  N +  L   + +L  L+ L V +NKL EL  +IG+   L  L +
Sbjct: 241 DSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELIL 300

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N I  +P+ +     L   +   N++  LP  +G+C  L       N +  +PE + D
Sbjct: 301 TENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGD 360

Query: 159 CSKMSKLDVEGNKLTVLSNNLI 180
              +  LDV GN+L  L ++L+
Sbjct: 361 LKNLQTLDVAGNRLDYLPDSLL 382


>gi|442618952|ref|NP_001262545.1| flyers-cup, isoform G [Drosophila melanogaster]
 gi|440217397|gb|AGB95927.1| flyers-cup, isoform G [Drosophila melanogaster]
          Length = 759

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 165/366 (45%), Gaps = 65/366 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSR 332
           K L  R
Sbjct: 395 KTLHDR 400



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 568 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 627

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 628 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 687

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 688 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 747

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 748 AIMSYLRDRIP 758



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 138/285 (48%), Gaps = 21/285 (7%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 219

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L C
Sbjct: 220 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDC 278

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N + ++P   F+    L  L  S N   +      S+LPHL+ L LR  ++ E P
Sbjct: 279 LYLQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELP 336

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            ++  L+ L  LD+S N++  +P    +L  L  L +  N I  +
Sbjct: 337 DELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 539 ELVSV 543
           +LV++
Sbjct: 246 DLVNM 250



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 31/185 (16%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQT-LILSRNK 414
           ++ L++    L+++P ++++      +  +D +RN +  LP  L     L T L+LS N 
Sbjct: 558 TRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNV 617

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           I   P  I +  + +S L L NN L  +P++                         F  L
Sbjct: 618 IGYVPQFI-SQFTRISFLNLSNNLLNDLPTE-------------------------FGVL 651

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNI 533
             L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  L+ LDL +N+I
Sbjct: 652 NTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDI 711

Query: 534 SALPP 538
             +PP
Sbjct: 712 ETVPP 716


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 172/387 (44%), Gaps = 46/387 (11%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 57  RQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 116

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 117 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 176

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 177 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 235

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQ K    E  QL  L  LDL NN L  LP 
Sbjct: 236 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPK 295

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  L+ L L+ N L  L   +  G    LL                          
Sbjct: 296 EIEQLKNLQTLFLSNNQLTILPQEI--GKLKNLL-------------------------- 327

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                    LSL    L+ +P+EI +   +  L+   N I  L  E+    +L+ L L+ 
Sbjct: 328 --------WLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNN 379

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPL 439
           N++   P  I   L +L  L L+N+ L
Sbjct: 380 NQLTTLPKEI-GQLKNLKKLYLNNHQL 405



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 135/269 (50%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 118 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 178 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N    +P+ IG L  L  LDL  N++ ++P  
Sbjct: 238 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L VL+  +
Sbjct: 297 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N ++ L  EIG++  L+ L L  N L TL
Sbjct: 357 NQITTLSQEIGQLQNLKVLFLNNNQLTTL 385



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 200/450 (44%), Gaps = 72/450 (16%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ + + F  +M +  EI +       +      K+L  +L   L++   + S   + +L
Sbjct: 10  LQKITIYFLFLMNLSCEIQAE------EVEPGTYKDLTKALQNPLDVRVLELSRQELKTL 63

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P ++     + +L +  N+LTVL                        P+ I  L  L  L
Sbjct: 64  PIEIGQLKNLQRLYLHYNQLTVL------------------------PQEIEQLKNLQLL 99

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  NR+ ++P  I    +L    +G+N L+ LP E+ +L  L  L LHSN+L     + 
Sbjct: 100 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI 159

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  LDLSNN L+ LP EI ++  L+ L L+ N                       
Sbjct: 160 EQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF--------------------- 198

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                    A+  KE  I     L V    L L    ++ +P+EI +  ++  L LS N 
Sbjct: 199 ---------ATFPKE--IGQLQNLKV----LFLNNNQITILPNEIAKLKKLQYLYLSDNQ 243

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +  LP E+    +LQTL LS N+ K  P  I   L +L  L L NN L+ +P +  + + 
Sbjct: 244 LITLPKEIEQLKNLQTLDLSYNQFKIIPKEI-GQLENLQTLDLRNNQLKTLPKE-IEQLK 301

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            LQ L LS N +  LP+      L +L  L L   QL   P +I +L+ L++L+   N +
Sbjct: 302 NLQTLFLSNNQLTILPQ--EIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQI 359

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++ +    L +L  L L++N ++ LP E+
Sbjct: 360 TTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 389



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 120/263 (45%), Gaps = 34/263 (12%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 167 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N    IP EIG    L   D  
Sbjct: 227 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLR 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L       
Sbjct: 287 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL------- 339

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P  I  L  L  L+   N+I ++   I    +L   ++ NN L
Sbjct: 340 -----------------PNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQL 382

Query: 243 SALPAELGKLSKLGTLDLHSNQL 265
           + LP E+G+L  L  L L+++QL
Sbjct: 383 TTLPKEIGQLKNLKKLYLNNHQL 405


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 192/437 (43%), Gaps = 76/437 (17%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
            T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N  
Sbjct: 3   ETVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQ 50

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +
Sbjct: 51  SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 110

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP    + LNL+    ++  +  LP +    +K+  L++  N+L +L             
Sbjct: 111 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML------------- 157

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  
Sbjct: 158 -----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGF 206

Query: 249 LGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L + 
Sbjct: 207 IGSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKID 265

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L  L  S+                                       V+ +EL    
Sbjct: 266 ENQLMYLPDSIGG------------------------------------LVSIEELDCSF 289

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  +
Sbjct: 290 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDM 348

Query: 427 SSLSCLKLDNNPLRQVP 443
             L  + L +N L+ +P
Sbjct: 349 QKLKVINLSDNRLKNLP 365



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 199/451 (44%), Gaps = 88/451 (19%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           E   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +N
Sbjct: 1   EEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDN 60

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +T+LP  +A+   + +LDV                        SKN +   PE I +  
Sbjct: 61  DLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNCK 96

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL            
Sbjct: 97  VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL------------ 144

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + ++T L +L L  N    +         P +L+
Sbjct: 145 ----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVLE 185

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L                              KE  ++G  L+ IP  I    ++T LD+
Sbjct: 186 QLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLDV 218

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D  
Sbjct: 219 SKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSI 276

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L 
Sbjct: 277 GGLVSIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLH 334

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 335 SNKLETLPEEMGDMQKLKVINLSDNRLKNLP 365



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 73  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 132

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 133 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 192

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 193 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 252

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 253 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 312

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 313 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 372

Query: 299 TLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
            L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 373 QLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 416


>gi|260788680|ref|XP_002589377.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
 gi|229274554|gb|EEN45388.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
          Length = 470

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 194/450 (43%), Gaps = 63/450 (14%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +    +K D S+  L  +P  +    +L     SNN +TS+PE +    K+S+LD +GN 
Sbjct: 11  TVNGHLKLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IGSL ++  L ++ N++  +P  +    +
Sbjct: 71  LTSL------------------------PQAIGSLQKMTDLYINDNQLTEVPPGVCSLPN 106

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL + NN LS  
Sbjct: 107 LEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTF 166

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L +  N L  + S + + P   +L    + L     S      E L  
Sbjct: 167 PPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNL-----STFPLGVEKLQK 221

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +        +EL + G  L+ +PS +     +  L +  N++   P  +     ++ L +
Sbjct: 222 V--------RELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVRKLYI 273

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIP--ML 453
             N++ + P  +   L +L  L +  NP+R++P+D                F + P  +L
Sbjct: 274 YGNQLTEVPSGVCL-LPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVL 332

Query: 454 QILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            +  L    A       F  +P       HL+ L L    LR  P+ +  L  LR++ L 
Sbjct: 333 HLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSHLHNLRVVQLP 392

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N   + PE    L ++ +LD+ +NNI+ L
Sbjct: 393 NNKFDTFPEVLCELPAMAKLDIRNNNITRL 422



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 208/473 (43%), Gaps = 48/473 (10%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++  +  + E++  +  L  L VS+NKL+ +P AIG L  L  LD   N +  +P 
Sbjct: 17  KLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLPQ 76

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            IGS   +     + NQL E+P  +    NL      NN +++ P  +    K+ +L + 
Sbjct: 77  AIGSLQKMTDLYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYIN 136

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT +    + S   L  L    N L+  P  +  L +L  L ++ N++  +PS +  
Sbjct: 137 DNQLTEVPPG-VCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCS 195

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +L    + NN LS  P  + KL K+  L ++ NQL E     C L  L VL + NN+L
Sbjct: 196 LPNLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNL 255

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           S  P  + K+  +RKL + GN L  + S                                
Sbjct: 256 STFPLGVEKLQKVRKLYIYGNQLTEVPSG------------------------------- 284

Query: 348 LITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            + +   L V S      GMN +  +P+++     +  L +      E P ++    +L+
Sbjct: 285 -VCLLPNLEVLSV-----GMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVLHLKTLE 338

Query: 407 TLILSRNKIKDW---PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 462
            L   +N  + +   PD +  +L  L  L L+NN LR +PS     +  L+++ L  N  
Sbjct: 339 ELYAGQNGGRKFDMVPDEV-GNLQHLRLLSLENNFLRTLPST-MSHLHNLRVVQLPNNKF 396

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            + PE      LP + +L +R   +    T + R  +LR LD+S N L   P+
Sbjct: 397 DTFPE--VLCELPAMAKLDIRNNNITRLLTALHRADKLRDLDVSGNPLTYPPQ 447



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 42/350 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE + +++ L  L +  N++ SIP +I     L+      N L++LP  +G L K+
Sbjct: 25  LTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLPQAIGSLQKM 84

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L ++ NQL E     C L  L VL + NN LS  PP + K+  LR+L +  N L  + 
Sbjct: 85  TDLYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVP 144

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             + + P   +L    ++L                                    S  P 
Sbjct: 145 PGVCSLPNLEVLGVGNNKL------------------------------------STFPP 168

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            + +  ++ +L ++ N + E+P  + S  +L+ L +  N +  +P  +   L  +  L +
Sbjct: 169 GVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGV-EKLQKVRELYI 227

Query: 435 DNNPLRQVPSDGFKDIPMLQILD-LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N L +VPS G   +P L++L   + N+++ P       L  +++LY+   QL E P+ 
Sbjct: 228 YGNQLTEVPS-GVCSLPNLEVLSVFNNNLSTFPLG--VEKLQKVRKLYIYGNQLTEVPSG 284

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +  L  L +L +  N ++ +P     L  L  L +        P +++ +
Sbjct: 285 VCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVLHL 334



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 51/341 (14%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N + ++   + +LP L VL V +NKLS  P  + +L  L+ L ++ N + ++
Sbjct: 130 LRELYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEV 189

Query: 107 PDEIGSATAL-----------------------VKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  + S   L                        +     NQL E+PS +    NL    
Sbjct: 190 PSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLS 249

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             NN +++ P  +    K+ KL + GN+LT + +  +     L  L    N +  +P  +
Sbjct: 250 VFNNNLSTFPLGVEKLQKVRKLYIYGNQLTEVPSG-VCLLPNLEVLSVGMNPIRRLPNDV 308

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG------------------------- 238
             L+RL  L +   +    P  +    +L E Y G                         
Sbjct: 309 TRLARLKTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSL 368

Query: 239 -NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
            NN L  LP+ +  L  L  + L +N+   +    C+L  ++ LD+ NN+++ L   + +
Sbjct: 369 ENNFLRTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMAKLDIRNNNITRLLTALHR 428

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
              LR L ++GNPL      +    T A++ +L+    + E
Sbjct: 429 ADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEARKGE 469



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 5/184 (2%)

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           +L L    L++IP E++   ++  L +S N +  +P  +     L  L    N +   P 
Sbjct: 17  KLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLPQ 76

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
           AI  SL  ++ L +++N L +VP  G   +P L++L +  N +++ P  P    L  L+E
Sbjct: 77  AI-GSLQKMTDLYINDNQLTEVPP-GVCSLPNLEVLGVGNNKLSTFP--PGVEKLQKLRE 132

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LY+   QL E P  +  L  L +L +  N L + P G + L  L EL ++DN ++ +P  
Sbjct: 133 LYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSG 192

Query: 540 LVSV 543
           + S+
Sbjct: 193 VCSL 196



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 31/257 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +NN+      +  L  +  L +  N+L+E+P+ +  L  L+ L V  N++  
Sbjct: 198 NLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLST 257

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL--NLSDFKASNNCITSLPEDLADCSKMS 163
            P  +     + K     NQL E+PS  G CL  NL       N I  LP D+   +++ 
Sbjct: 258 FPLGVEKLQKVRKLYIYGNQLTEVPS--GVCLLPNLEVLSVGMNPIRRLPNDVTRLARLK 315

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKN--------------------------LLN 197
            L V G +       ++   T L EL A +N                           L 
Sbjct: 316 TLSVPGCQFDEFPRQVLHLKT-LEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLR 374

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P T+  L  L  + L  N+  + P  +    ++A+  + NN ++ L   L +  KL  
Sbjct: 375 TLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMAKLDIRNNNITRLLTALHRADKLRD 434

Query: 258 LDLHSNQLKEYCVEACQ 274
           LD+  N L     + C+
Sbjct: 435 LDVSGNPLTYPPQDVCK 451


>gi|313220970|emb|CBY31803.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 36/348 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILA 53
            K  R   S   ++  L  VP EVY++     E             ++++ V+L+KL L+
Sbjct: 12  FKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLS 71

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N++  L +++  L  L  L++S N L  +P  I  L +L+S+D S N + +IP+ + + 
Sbjct: 72  DNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +L     ++  L+  P + G    L   +A  N + +LPE + +   +  LD+  N++T
Sbjct: 132 ASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEIT 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L        + L EL    N L  +PE+IG L  L   D  +N++  IP SIS C +++
Sbjct: 192 KLPEKF-GKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNIS 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVE---------------- 271
              +  N LS LP  +G L KL  L + +N+L E       CV                 
Sbjct: 251 VLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPE 310

Query: 272 --ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             AC  RL VL+L  N ++ LP +IGK   LR L L  N L  +  ++
Sbjct: 311 SVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETI 358



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L    N +  L E +  LP L  L++  N++++LP   G+L  L  L +  N +  +
Sbjct: 157 LETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSL 216

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L   D + N+L+++P S+  C+N+S      N ++ LP  +    K+S+L 
Sbjct: 217 PESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELT 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ NKL  L+ + I     LTELI ++NL+  +PE++  L RL  L+L +NRI  +P  I
Sbjct: 277 VDNNKLCELTES-IGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKI 335

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L   ++  N L  +P  +G L  L TLD+  N+L        QL +  + LS N 
Sbjct: 336 GKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLSANQ 395

Query: 287 LSGL 290
              L
Sbjct: 396 AQPL 399



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 44/363 (12%)

Query: 219 ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           + S+P  +     SL E  +G+N +  LP +  KL  L  L+L  N L     E  QL +
Sbjct: 28  LASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSK 87

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------ 330
           L  LDLS N L  +P  I  +  L  +  + NP+  +  ++VN    A LK+L+      
Sbjct: 88  LVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL---ASLKHLKINAISL 144

Query: 331 SRLPENEDS----EASTTKEDLITM--------------------ATRLSVTSKELS--- 363
            R PEN       E    +E+++                       T+L     +LS   
Sbjct: 145 ERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLL 204

Query: 364 ---LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
              ++  +L+++P  I     +T  D ++N ++++P  +S+C ++  L L  N +   P 
Sbjct: 205 ELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPH 264

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           +I  SL  LS L +DNN L ++     + + + +++     I  LPE+   + L  L  L
Sbjct: 265 SI-GSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPES--VACLCRLGVL 321

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L R ++   P  I + + LR+L L +N L+ IPE   +L +L  LD++ N +  LP  L
Sbjct: 322 NLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSL 381

Query: 541 VSV 543
           + +
Sbjct: 382 LQL 384



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D     V++  L L  N +  L   + +L  L+ L V +NKL EL  +IG+   L  L +
Sbjct: 241 DSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELIL 300

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N I  +P+ +     L   +   N++  LP  +G+C  L       N +  +PE + D
Sbjct: 301 TENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGD 360

Query: 159 CSKMSKLDVEGNKLTVLSNNLI 180
              +  LDV GN+L  L ++L+
Sbjct: 361 LKNLQTLDVAGNRLDYLPDSLL 382


>gi|407040320|gb|EKE40068.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba nuttalli P19]
          Length = 861

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 245/488 (50%), Gaps = 29/488 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N++++  + ++ L  LT +N+S N+++++    G LH L+ +D+S N I  +
Sbjct: 76  LKTLDLSSNHLKRFCKSIK-LTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSV 134

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +   T+L   D S+N L   P+ L    +L   K   N IT++P  ++  S +  LD
Sbjct: 135 PKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQILD 194

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  ++ +L    T L+ L  S N +N + + I +L+ +  +D+  + + ++P S 
Sbjct: 195 ISNNKIDKITPSL-CKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L +  + + ++   PA L K +K+  L+L + + ++     C      +DLS N 
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCS---GDIDLSCNQ 310

Query: 287 LSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +  L  P++    ++ KL L  N L+         P    LK +++ + + ++   S   
Sbjct: 311 IVELDLPDME--YSIHKLNLGQNRLKDF-------PNIKCLKEIKTLILQ-KNMLGSIPL 360

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC-AS 404
           E    M T  S+T+ +LS    N  A P  I     +  L++S N +  LP    SC A 
Sbjct: 361 E----MFTGTSLTALDLSSNSFN--AFPMSITTCTNLVLLNMSNNYLDSLPDISYSCFAK 414

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L+L  N I   P+  ++ L++L+ L L++N L ++P   F    M ++++L  N   
Sbjct: 415 LEALLLGINIIDRLPET-MSELTNLTTLHLEHNKLSKIPESLFS---MTKLVELFLNCNQ 470

Query: 465 LPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +PE P  FS L +L+ L L    ++E  T I+ L  ++ LDLS N ++  P     +TSL
Sbjct: 471 IPELPEKFSLLTNLEILELSCNYIKEI-TPIVNLVGVKDLDLSTNQIEKCPSDLCGMTSL 529

Query: 524 TELDLSDN 531
             LDLS N
Sbjct: 530 RSLDLSYN 537



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 235/530 (44%), Gaps = 74/530 (13%)

Query: 75  VSHNK-LSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V H K L+E P      EL  +  +DVS N I +IP +I S   L KF  + N +K LPS
Sbjct: 10  VKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPS 69

Query: 132 SLG---------------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +                      +  +L++   S N IT + +D      +  +D+  N
Sbjct: 70  QINIPTLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSIN 129

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  +  +L +  T LT +  S NLL   P  +  LS LI L + +N+I +IP+ +S   
Sbjct: 130 RIQSVPKHL-SKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMS 188

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L    + NN +  +   L KL+KL  LD+ +N + E   +   L  +  +D+S + L  
Sbjct: 189 NLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKT 248

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPE 335
           LP     +  LRKL        TL+ + V  P   L K+ +              + LP 
Sbjct: 249 LPKSFMSLVGLRKL--------TLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 336 NEDSEASTTK------EDLITMATRLSVTS---------------KELSLEGMNLSAIPS 374
           + D + S  +       D+     +L++                 K L L+   L +IP 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLKEIKTLILQKNMLGSIPL 360

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E++    +T LDLS NS    P  +++C +L  L +S N +   PD   +  + L  L L
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVLLNMSNNYLDSLPDISYSCFAKLEALLL 420

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N + ++P +   ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P  
Sbjct: 421 GINIIDRLP-ETMSELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEK 477

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  L IL+LS N ++ I     NL  + +LDLS N I   P +L  +
Sbjct: 478 FSLLTNLEILELSCNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM 526



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 198/444 (44%), Gaps = 64/444 (14%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L +  N I  +   +  +  L +L++S+NK+ ++  ++ +L  L  LDVS N I +I D+
Sbjct: 170 LKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQ 229

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-- 167
           I + T + + D S + LK LP S    + L      +  +   P  L   +K+S+L++  
Sbjct: 230 IQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSN 289

Query: 168 -EGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            E  K+T L  S ++  S   + EL         +P+   S+    +L+L QNR+   P 
Sbjct: 290 GEFEKVTELPCSGDIDLSCNQIVEL--------DLPDMEYSIH---KLNLGQNRLKDFP- 337

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           +I     +    +  N L ++P E+   + L  LDL SN    +   +  C   L +L++
Sbjct: 338 NIKCLKEIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSITTCT-NLVLLNM 396

Query: 283 SNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           SNN L  LP         L  LLL  N +                     RLPE      
Sbjct: 397 SNNYLDSLPDISYSCFAKLEALLLGINII--------------------DRLPE------ 430

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                   TM+   ++T+  L LE   LS IP  ++   ++ +L L+ N I ELP + S 
Sbjct: 431 --------TMSELTNLTT--LHLEHNKLSKIPESLFSMTKLVELFLNCNQIPELPEKFSL 480

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L+ L LS N IK+    +  +L  +  L L  N + + PSD    +  L+ LDLSYN
Sbjct: 481 LTNLEILELSCNYIKEITPIV--NLVGVKDLDLSTNQIEKCPSD-LCGMTSLRSLDLSYN 537

Query: 462 --IASLPENPPF--SSLPHLQELY 481
              +S    P F  SSL  L   +
Sbjct: 538 GDYSSTENFPMFFTSSLTRLTNFH 561



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 30/186 (16%)

Query: 358 TSKELSLEGMNLSAIPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           T  ++     NL+  P E    E   +  +D+S N IQE+P +++S   LQ    + N I
Sbjct: 5   TETKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMI 64

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           K  P  I                          +IP L+ LDLS N   L        L 
Sbjct: 65  KTLPSQI--------------------------NIPTLKTLDLSSN--HLKRFCKSIKLT 96

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L E+ L   Q+ +   D   L  LR +DLS N +QS+P+    LTSLT +D+S+N +++
Sbjct: 97  SLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTS 156

Query: 536 LPPELV 541
            P  L+
Sbjct: 157 FPTPLL 162


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 194/433 (44%), Gaps = 76/433 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   L  
Sbjct: 26  TLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQSLHK 73

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +LP  
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG 133

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + LNL+    ++  +  LP +    +K+  L++  N+L +L                 
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML----------------- 176

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +G L
Sbjct: 177 -------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSL 229

Query: 253 SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  N L
Sbjct: 230 KQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+                              LI++        +EL      + 
Sbjct: 289 MYLPDSIGG----------------------------LISV--------EELDCSFNEVE 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           A+PS I E   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  +  L 
Sbjct: 313 ALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQKLK 371

Query: 431 CLKLDNNPLRQVP 443
            + L +N L+ +P
Sbjct: 372 VINLSDNRLKNLP 384



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEEAVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404


>gi|390355646|ref|XP_003728599.1| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 643

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 212/497 (42%), Gaps = 51/497 (10%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           K KE++     L    +SH  +  L  A   +  +  L++++NS+  +P++I S    ++
Sbjct: 15  KGKEEIGEAVDLESQGLSHFDIGALRVAGTCIRNITELNLNYNSLSTLPNDIASVLPRIQ 74

Query: 119 FDC-SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
             C S N LKELP+ LG    L    A+ N I+ LP  L    K+  L + GN+L  LS 
Sbjct: 75  ILCLSGNDLKELPAVLGSLEELRSLSANENEISLLPVSLFHLPKLEDLHLLGNRLKQLSP 134

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           + I     L  L    N L   P T G L  L  L+  +N + ++P +     +LA   +
Sbjct: 135 D-ICHLKTLRNLTLEDNQLCDFPSTFGDLESLHTLEASENNLEALPKNFGNLRNLAVLNV 193

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYC-----VEACQLRLSVLDLSNNSLSGLPP 292
             N L  LP   G L  L  +DL +N L E          C ++ S  D   N L   PP
Sbjct: 194 SRNKLLELPDSFGDLPSLQYVDLSNNYLPELTPRLASASRCLVKFSAAD---NLLKRFPP 250

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IG++T ++++ L  N                   Y+   LPE+  + +  T   +   A
Sbjct: 251 WIGELTHIQEIYLGNN-------------------YIEHELPEHFGTVSGNTLRHMDVGA 291

Query: 353 TRLSVTSKELSL--------EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             L        L         G ++  I    ++ G         N I  LP       +
Sbjct: 292 NFLDHLPSSFGLLRNVETLHFGSHIMEIERRAFQNG---------NRITHLPESFGLMLN 342

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L+ L L  N +   P++    L +L    +  N LR++P+  F  +  L+   LS N I 
Sbjct: 343 LRHLRLDENSLNCLPES-FGDLYALEYFDVGQNVLRKLPA-SFSRLGSLKTCLLSKNNIE 400

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LPE+  F +L  L+ L + R QLRE P    +L  L+ LDL +N L+  P     LT+L
Sbjct: 401 RLPED--FGNLRSLERLRINRNQLRELPASFNQLVNLQTLDLVENRLREFPACLNQLTNL 458

Query: 524 TELDLSDNNISALPPEL 540
             + L DN+     PE+
Sbjct: 459 VRVALDDNDFELDIPEV 475



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 201/466 (43%), Gaps = 62/466 (13%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y+     G+ ++  EAVDL+   L+H +I  L+     +  +T LN+++N LS L    
Sbjct: 8   MYRTGQSKGK-EEIGEAVDLESQGLSHFDIGALRVAGTCIRNITELNLNYNSLSTL---- 62

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC-SSNQLKELPSSLGRCLNLSDFKASN 146
                              P++I S    ++  C S N LKELP+ LG    L    A+ 
Sbjct: 63  -------------------PNDIASVLPRIQILCLSGNDLKELPAVLGSLEELRSLSANE 103

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I+ LP  L    K+  L + GN+L  LS + I     L  L    N L   P T G L
Sbjct: 104 NEISLLPVSLFHLPKLEDLHLLGNRLKQLSPD-ICHLKTLRNLTLEDNQLCDFPSTFGDL 162

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+  +N + ++P +     +LA   +  N L  LP   G L  L  +DL +N L 
Sbjct: 163 ESLHTLEASENNLEALPKNFGNLRNLAVLNVSRNKLLELPDSFGDLPSLQYVDLSNNYLP 222

Query: 267 EYC-----VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---------- 311
           E          C ++ S  D   N L   PP IG++T ++++ L  N +           
Sbjct: 223 ELTPRLASASRCLVKFSAAD---NLLKRFPPWIGELTHIQEIYLGNNYIEHELPEHFGTV 279

Query: 312 ---TLRSSLVNG----PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-------- 356
              TLR   V        P+    LR+    +  S     +        R++        
Sbjct: 280 SGNTLRHMDVGANFLDHLPSSFGLLRNVETLHFGSHIMEIERRAFQNGNRITHLPESFGL 339

Query: 357 -VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +  + L L+  +L+ +P    +   +   D+ +N +++LP   S   SL+T +LS+N I
Sbjct: 340 MLNLRHLRLDENSLNCLPESFGDLYALEYFDVGQNVLRKLPASFSRLGSLKTCLLSKNNI 399

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
           +  P+    +L SL  L+++ N LR++P+  F  +  LQ LDL  N
Sbjct: 400 ERLPED-FGNLRSLERLRINRNQLRELPA-SFNQLVNLQTLDLVEN 443



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 198/464 (42%), Gaps = 46/464 (9%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDE------AGEGDKWWEAV-----DLQKLILAHNNI 57
           R    LNL+  SL  +PN++            +G   K   AV     +L+ L    N I
Sbjct: 47  RNITELNLNYNSLSTLPNDIASVLPRIQILCLSGNDLKELPAVLGSLEELRSLSANENEI 106

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
             L   L +LP L  L++  N+L +L   I  L  L++L +  N +   P   G   +L 
Sbjct: 107 SLLPVSLFHLPKLEDLHLLGNRLKQLSPDICHLKTLRNLTLEDNQLCDFPSTFGDLESLH 166

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
             + S N L+ LP + G   NL+    S N +  LP+   D   +  +D+  N L  L+ 
Sbjct: 167 TLEASENNLEALPKNFGNLRNLAVLNVSRNKLLELPDSFGDLPSLQYVDLSNNYLPELTP 226

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIP---SSISGCCSLA 233
            L ++   L +  A+ NLL   P  IG L+ +  + L  N I   +P    ++SG  +L 
Sbjct: 227 RLASASRCLVKFSAADNLLKRFPPWIGELTHIQEIYLGNNYIEHELPEHFGTVSG-NTLR 285

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
              +G N L  LP+  G L  + TL   S  + E    A Q        + N ++ LP  
Sbjct: 286 HMDVGANFLDHLPSSFGLLRNVETLHFGS-HIMEIERRAFQ--------NGNRITHLPES 336

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
            G M  LR L L  N L  L  S   G   AL  +                   L    +
Sbjct: 337 FGLMLNLRHLRLDENSLNCLPESF--GDLYALEYF----------DVGQNVLRKLPASFS 384

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           RL  + K   L   N+  +P +      + +L ++RN ++ELP   +   +LQTL L  N
Sbjct: 385 RLG-SLKTCLLSKNNIERLPEDFGNLRSLERLRINRNQLRELPASFNQLVNLQTLDLVEN 443

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           +++++P A L  L++L  + LD+N       D   DIP +  LD
Sbjct: 444 RLREFP-ACLNQLTNLVRVALDDN-------DFELDIPEVNNLD 479



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 6/185 (3%)

Query: 361 ELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           EL+L   +LS +P++I      I  L LS N ++ELP  L S   L++L  + N+I   P
Sbjct: 51  ELNLNYNSLSTLPNDIASVLPRIQILCLSGNDLKELPAVLGSLEELRSLSANENEISLLP 110

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
            ++   L  L  L L  N L+Q+  D    +  L+ L L  N +   P    F  L  L 
Sbjct: 111 VSLF-HLPKLEDLHLLGNRLKQLSPD-ICHLKTLRNLTLEDNQLCDFPST--FGDLESLH 166

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L      L   P +   L+ L +L++S+N L  +P+ F +L SL  +DLS+N +  L P
Sbjct: 167 TLEASENNLEALPKNFGNLRNLAVLNVSRNKLLELPDSFGDLPSLQYVDLSNNYLPELTP 226

Query: 539 ELVSV 543
            L S 
Sbjct: 227 RLASA 231


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----------------------IASWTM 185
            + ++ +++     + KL ++ N+LT LS  +                      I     
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLTTI 318



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 74  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 133

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL  L   +G+  NL     SNN +T+ P+++     + +L
Sbjct: 134 ISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 193

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 194 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 252

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 253 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 312

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 313 NQLTTIPKEIGQLQNLQTLYLRNNQL 338



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 10/290 (3%)

Query: 19  RSLRDVPN--EVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           + +R + N  E++ N+++     K  E +  L KL L++N +  L  ++  L  L  LN+
Sbjct: 67  KEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNL 126

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
            +N+L  +   I +L  L+ L +  N +  +  EIG    L     S+NQL   P  +G+
Sbjct: 127 WNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGK 186

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +   SNN +T+ P+++    K+  L +  N+LT + N  I     L EL    N 
Sbjct: 187 LQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNE-IGKLQKLQELNLDVNQ 245

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L L  N+  +IP       +L    +  N L+ALP E+GKL  L
Sbjct: 246 LTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNL 305

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             L+L +NQL     E  QL+ L  L L NN LS     I +   +RKLL
Sbjct: 306 KMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS-----IEEKERIRKLL 350



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 147/335 (43%), Gaps = 39/335 (11%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 42  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 101

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 102 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 137

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 138 IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 197

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 198 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 248

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L       IP E  +   +  L L  N +  LP E+    +
Sbjct: 249 IPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKN 304

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+ L L  N++   P  I   L +L  L L NN L
Sbjct: 305 LKMLNLDANQLTTIPKEI-GQLQNLQTLYLRNNQL 338



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 137/302 (45%), Gaps = 42/302 (13%)

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP ++G+L  L  LDL  NQL     E  QL+ L  L L+ N L+  P EI ++ +
Sbjct: 38  KLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKS 97

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L KL L+ N L  L         P  +  L++                            
Sbjct: 98  LHKLYLSNNQLTIL---------PVEIGQLQNL--------------------------- 121

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL+L    L  I  EI +   + KL L  N +  L  E+    +L++L LS N++  +P
Sbjct: 122 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFP 181

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L +L  L L NN L   P +  K +  LQ L L  N + ++P       L  LQ
Sbjct: 182 KEI-GKLQNLQELYLSNNQLTTFPKEIGK-LQKLQWLGLGDNQLTTIPN--EIGKLQKLQ 237

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L   QL   P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP 
Sbjct: 238 ELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 297

Query: 539 EL 540
           E+
Sbjct: 298 EI 299



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  L   P E+ K               +LQ+L L++N +    +++  L  L  
Sbjct: 169 SLFLSNNQLTTFPKEIGK-------------LQNLQELYLSNNQLTTFPKEIGKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P  IG+L  L+ L++  N +  IP EIG    L     S NQ K +P  
Sbjct: 216 LGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            G+  NL       N +T+LP+++     +  L+++ N+LT +
Sbjct: 276 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTI 318



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL     +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 196 SNNQLTTFPKEI 207



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+ K                LQ L L  N +  +  ++  L  L  
Sbjct: 192 ELYLSNNQLTTFPKEIGK-------------LQKLQWLGLGDNQLTTIPNEIGKLQKLQE 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 239 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N +T++P+++     +  L +  N+L++
Sbjct: 299 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSI 340


>gi|449704403|gb|EMD44652.1| leucinerich repeat-containing protein [Entamoeba histolytica KU27]
          Length = 861

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 235/530 (44%), Gaps = 74/530 (13%)

Query: 75  VSHNK-LSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V H K L+E P      EL  +  +DVS N I +IP +I S   L KF  + N +K LPS
Sbjct: 10  VKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPS 69

Query: 132 SLG---------------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +                      +  +L++   S N IT + +D      +  +D+  N
Sbjct: 70  QINIPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSIN 129

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  +  +L +  T LT +  S NLL   P  +  LS LI L + +N+I +IP+ +S   
Sbjct: 130 RIQSVPKHL-SKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMS 188

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L    + NN +  +   L KL+KL  LD+ +N + E   +   L  +  +D+S + L  
Sbjct: 189 NLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKT 248

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPE 335
           LP     +  LRKL        TL+ + V  P   L K+ +              + LP 
Sbjct: 249 LPKSFMSLVGLRKL--------TLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 336 NEDSEASTTK------EDLITMATRLSVTS---------------KELSLEGMNLSAIPS 374
           + D + S  +       D+     +L++                 K L L+   L +IP 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E++    +T LDLS NS    P  +++C +L  L +S N +   PD   +  + L  L L
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYSCFAKLEALLL 420

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N + ++P +   ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P  
Sbjct: 421 GINIIDRLP-ETMSELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEK 477

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  L IL+LS N ++ I     NL  + +LDLS N I   P +L  +
Sbjct: 478 FSLLTNLEILELSCNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM 526



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 242/490 (49%), Gaps = 33/490 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N++++  + ++ L  LT +N+S N+++++    G LH L+ +D+S N I  +
Sbjct: 76  LKTLDLSSNHLKRFCKSIK-LTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSV 134

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +   T+L   D S+N L   P+ L    +L   K   N IT++P  ++  S +  LD
Sbjct: 135 PKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQILD 194

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  ++ +L    T L+ L  S N +N + + I +L+ +  +D+  + + ++P S 
Sbjct: 195 ISNNKIDKITPSL-CKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L +  + + ++   PA L K +K+  L+L + + ++     C      +DLS N 
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCS---GDIDLSCNQ 310

Query: 287 LSGLP-PEIGKMTTLRKLLLTGNPLRTLRS--SLVNGPTPALLKYLRSRLPENEDSEAST 343
           +  L  P++    ++ KL L  N L+   +   L    T  L K +   +P         
Sbjct: 311 IVELDLPDME--YSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIP--------- 359

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC- 402
                + M T  S+T+ +LS    N  A P  I     +  L++S N +  LP    SC 
Sbjct: 360 -----LEMFTGTSLTALDLSSNSFN--AFPMSITTCTNLVVLNMSNNYLDSLPDISYSCF 412

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           A L+ L+L  N I   P+  ++ L++L+ L L++N L ++P   F    M ++++L  N 
Sbjct: 413 AKLEALLLGINIIDRLPET-MSELTNLTTLHLEHNKLSKIPESLFS---MTKLVELFLNC 468

Query: 463 ASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
             +PE P  FS L +L+ L L    ++E  T I+ L  ++ LDLS N ++  P     +T
Sbjct: 469 NQIPELPEKFSLLTNLEILELSCNYIKEI-TPIVNLVGVKDLDLSTNQIEKCPSDLCGMT 527

Query: 522 SLTELDLSDN 531
           SL  LDLS N
Sbjct: 528 SLRSLDLSYN 537



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 30/186 (16%)

Query: 358 TSKELSLEGMNLSAIPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           T  ++     NL+  P E    E   +  +D+S N IQE+P +++S   LQ    + N I
Sbjct: 5   TETKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMI 64

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           K  P  I                          +IP L+ LDLS N   L        L 
Sbjct: 65  KTLPSQI--------------------------NIPSLKTLDLSSN--HLKRFCKSIKLT 96

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L E+ L   Q+ +   D   L  LR +DLS N +QS+P+    LTSLT +D+S+N +++
Sbjct: 97  SLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTS 156

Query: 536 LPPELV 541
            P  L+
Sbjct: 157 FPTPLL 162


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 151/296 (51%), Gaps = 15/296 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           ++Y++  EA     + +  D+  L L++  I+ L   + NL  L  L++ +N+L+ LP  
Sbjct: 32  KIYRDLREA-----FQKPSDVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKE 86

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+LH L+SL +  NS+  +P+EIG    L +   S N L  LP ++GR  NL     S 
Sbjct: 87  IGQLHNLQSLCLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSV 146

Query: 147 NCIT--------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           N  +         + E++ D   + +L++ GN+LT+L    I     L +L  S+N L  
Sbjct: 147 NLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTMLPKE-IGKLQSLEKLDLSENSLAI 205

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L RL L  NR+ + P  I    +L E  +  N L+ LP E+ +   L  L
Sbjct: 206 LPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLREL 265

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  N+L     E  +L+ L  L L  N L+ LP EIGK   L +L L GN L TL
Sbjct: 266 SLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 164/374 (43%), Gaps = 65/374 (17%)

Query: 58  EKLKEDLRNLPL----LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           EK+  DLR        + +L +S+ ++  LP  I  L  L+ LD+ +N +  +P EIG  
Sbjct: 31  EKIYRDLREAFQKPSDVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQL 90

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L  LP  +G   NL +   S+N + +LPE++     +  LD+  N   
Sbjct: 91  HNLQSLCLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN--- 147

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
                 + S    +E I       G+ E IG L  L  L+L  NR+  +P  I    SL 
Sbjct: 148 ------LRSLIFRSEEI-------GISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLE 194

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           +  +  N+L+ LP E+G+L  L  L L  N+L  +  E  +L+ L  LDLS N L+ LP 
Sbjct: 195 KLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPK 254

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI +   LR+L L GN L TL   +        LK L                       
Sbjct: 255 EISRFQNLRELSLEGNRLSTLPKEI------GRLKNL----------------------- 285

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                  KELSL G  L+ +P EI +   + +L L  N +  LP E+     L +L LS+
Sbjct: 286 -------KELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSK 338

Query: 413 N--------KIKDW 418
           N        +I+ W
Sbjct: 339 NPLSVYEKKRIQKW 352



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS--------ELPAAIGELHMLKSLD 97
           +L++L L+HN +  L E++  L  L VL++S N  S         +   IG+L  LK L+
Sbjct: 115 NLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELN 174

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           ++ N +  +P EIG   +L K D S N L  LP  +GR  NL       N +T+ P+++ 
Sbjct: 175 LTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIG 234

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +LD+  N L +L    I+ +  L EL    N L+ +P+ IG L  L  L L  N
Sbjct: 235 KLQNLEELDLSENLLAILPKE-ISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN 293

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           R+ ++P  I    +L E  +  N L+ LP E+GKL  L +L+L  N L  Y  +  Q
Sbjct: 294 RLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSVYEKKRIQ 350



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 147/311 (47%), Gaps = 40/311 (12%)

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
            Y+ N  + +LP ++  L  L  LDL  NQL     E  QL  L  L L  NSLS LP E
Sbjct: 50  LYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEE 109

Query: 294 IGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           IG +  L++L L+ N L TL  +   L N     L   LRS +  +E+   S    DL  
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQN 169

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +        KEL+L G  L+ +P EI +   + KLDLS NS+  LP E+    +L+ L L
Sbjct: 170 L--------KELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSL 221

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
             N++  +P  I          KL N                L+ LDLS N +A LP+  
Sbjct: 222 KGNRLTTFPKEI---------GKLQN----------------LEELDLSENLLAILPKE- 255

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
             S   +L+EL L   +L   P +I RL+ L+ L L  N L ++P+      +L EL L 
Sbjct: 256 -ISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLE 314

Query: 530 DNNISALPPEL 540
            N ++ LP E+
Sbjct: 315 GNRLTTLPKEI 325



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 1/185 (0%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G  ++  +  +L++L L  N +  L +++  L  L  L++S N L+ LP  IG L  
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LK L +  N +   P EIG    L + D S N L  LP  + R  NL +     N +++L
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTL 275

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L + GN+LT L    I  +  L EL    N L  +P+ IG L  L  L
Sbjct: 276 PKEIGRLKNLKELSLGGNRLTTLPKE-IGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSL 334

Query: 213 DLHQN 217
           +L +N
Sbjct: 335 NLSKN 339



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P E+ K                L+KL L+ N++  L +++  L  L  L
Sbjct: 173 LNLTGNRLTMLPKEIGK-------------LQSLEKLDLSENSLAILPKEIGRLQNLKRL 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  P  IG+L  L+ LD+S N +  +P EI     L +     N+L  LP  +
Sbjct: 220 SLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           GR  NL +     N +T+LP+++     + +L +EGN+LT L
Sbjct: 280 GRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 13/171 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS  SL  +P E+ +               +L++L L  N +    +++  L  L  
Sbjct: 195 KLDLSENSLAILPKEIGR-------------LQNLKRLSLKGNRLTTFPKEIGKLQNLEE 241

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N L+ LP  I     L+ L +  N +  +P EIG    L +     N+L  LP  
Sbjct: 242 LDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKE 301

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           +G+  NL + +   N +T+LP+++     +  L++  N L+V     I  W
Sbjct: 302 IGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSVYEKKRIQKW 352


>gi|390343687|ref|XP_003725942.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Strongylocentrotus purpuratus]
          Length = 744

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 227/494 (45%), Gaps = 20/494 (4%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  +I  +  D   L  L  L+V+   L E+P+ +  L  L SL +   S+ + P  I 
Sbjct: 125 LSEEDISVIPPDTFELDFLNYLSVTCLPLYEIPSGLSYLQQLDSLTLRECSLTEFPGSIC 184

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L   D S N+++E+P+ +    +L     S+N +T+LP +     K+  + +  NK
Sbjct: 185 ALPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKLICVFLSQNK 244

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L  N I+    +  L  + N+L  +P+ +  L +L++L L  N + ++P+ I    +
Sbjct: 245 LTSLPAN-ISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTLPADIEYLFN 303

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E ++  N+   LP ++  L +L  L L  N ++E   E  +L +L VLDL  N L+ +
Sbjct: 304 LQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTV 363

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EI  +  L  L L  N L +L  ++       L K +   +  NE +E        I 
Sbjct: 364 PQEICLLLNLVFLGLGSNRLTSLPDNM-----NRLYKLVEFLVGNNELTE--------IP 410

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
               L    + L L   ++S +P EI    ++  L L  N I   PP     +  + L  
Sbjct: 411 DDLSLLSQLQVLDLSNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSF 470

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
            RN +   P  +   + SL  + + NN L Q P +   ++  LQ LDLS N I+S+P + 
Sbjct: 471 DRNLLSRLPSEV-KHMKSLQSVTITNNRLTQFPKE-LCEVRTLQFLDLSQNLISSVPAS- 527

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L +L++  L          ++  L+ L  L +S N +  I E       L  LDLS
Sbjct: 528 -VRRLQNLEKFILNENTFTAITPEMCTLKNLVSLSMSDNQITEICEEVSMYQRLEALDLS 586

Query: 530 DNNISALPPELVSV 543
           +N     PPE+ ++
Sbjct: 587 NNQFPVFPPEIWTI 600



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 236/510 (46%), Gaps = 45/510 (8%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LPLL  L++S N++ E+P  I  L  L+ +D+S N +  +P+E      L+    S N+L
Sbjct: 186 LPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKLICVFLSQNKL 245

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM- 185
             LP+++    N+   + +NN +  LP+ +    ++ KL + GN L  L  ++   + + 
Sbjct: 246 TSLPANISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTLPADIEYLFNLQ 305

Query: 186 ---------------------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                L EL  S+N +  +   I  L++L  LDL  N + ++P 
Sbjct: 306 ELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTVPQ 365

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 283
            I    +L    +G+N L++LP  + +L KL    + +N+L E   + +   +L VLDLS
Sbjct: 366 EICLLLNLVFLGLGSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVLDLS 425

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSE 340
           NN +S LP EI  +  +  L L GN + T       L      +  + L SRLP    SE
Sbjct: 426 NNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNLLSRLP----SE 481

Query: 341 ASTTK--EDLITMATRLSVTSKEL----SLEGMNL-----SAIPSEIWEAGEITKLDLSR 389
               K  + +     RL+   KEL    +L+ ++L     S++P+ +     + K  L+ 
Sbjct: 482 VKHMKSLQSVTITNNRLTQFPKELCEVRTLQFLDLSQNLISSVPASVRRLQNLEKFILNE 541

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N+   + PE+ +  +L +L +S N+I +  + + +    L  L L NN     P + +  
Sbjct: 542 NTFTAITPEMCTLKNLVSLSMSDNQITEICEEV-SMYQRLEALDLSNNQFPVFPPEIWT- 599

Query: 450 IPMLQILDL--SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           I  L+IL       + +    P   +   L+E+Y++   L   P  I  L +LRI   S 
Sbjct: 600 ILRLRILHFIQEKGVKASFLQPAIYNCQDLEEIYVQHNCLTMIPNTIRSLSKLRIFCASD 659

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           N L  IPE F  L +L  L L  N I +LP
Sbjct: 660 NCLMDIPEVFCELKNLEVLKLERNQIKSLP 689



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 226/547 (41%), Gaps = 93/547 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           L+E P +I  L +L+ LD+S N I +IP EI   ++L + D S NQL  LP+       L
Sbjct: 176 LTEFPGSICALPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKL 235

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
                S N +TSLP +++    +  L++  N L  L    +     L +L    N L  +
Sbjct: 236 ICVFLSQNKLTSLPANISHLRNIQVLEMNNNMLKWLPKQ-VCLLDQLVKLSLCGNYLQTL 294

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  I  L  L  L L QN    +P  I     L E Y+  N +  + +E+ KL+KL  LD
Sbjct: 295 PADIEYLFNLQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLD 354

Query: 260 LHSNQLKEYCVEACQL-----------RLSVL---------------------------- 280
           L +N+L     E C L           RL+ L                            
Sbjct: 355 LGTNELNTVPQEICLLLNLVFLGLGSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLS 414

Query: 281 --------DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYL 329
                   DLSNN +S LP EI  +  +  L L GN + T       L      +  + L
Sbjct: 415 LLSQLQVLDLSNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNL 474

Query: 330 RSRLPENEDSEASTTK--EDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWE 378
            SRLP    SE    K  + +     RL+   KEL    +L+ ++LS     ++P+ +  
Sbjct: 475 LSRLP----SEVKHMKSLQSVTITNNRLTQFPKELCEVRTLQFLDLSQNLISSVPASVRR 530

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + K  L+ N+   + PE+ +  +L +L +S N+I +  + + +    L  L L NN 
Sbjct: 531 LQNLEKFILNENTFTAITPEMCTLKNLVSLSMSDNQITEICEEV-SMYQRLEALDLSNNQ 589

Query: 439 LRQVPSDGFKDIPMLQILDL--SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
               P + +  I  L+IL       + +    P   +   L+E+Y++   L   P  I  
Sbjct: 590 FPVFPPEIWT-ILRLRILHFIQEKGVKASFLQPAIYNCQDLEEIYVQHNCLTMIPNTIRS 648

Query: 497 LQQLRI-----------------------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +LRI                       L L +N ++S+P  F+ L+ L  L L  N +
Sbjct: 649 LSKLRIFCASDNCLMDIPEVFCELKNLEVLKLERNQIKSLPINFEMLSELRVLRLDTNPL 708

Query: 534 SALPPEL 540
           +  P E+
Sbjct: 709 AHPPSEV 715



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 190/457 (41%), Gaps = 80/457 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +LQ+L L  N+   L   +  LP L  L +S N + E+ + I +L  L+ LD+  N + 
Sbjct: 302 FNLQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELN 361

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED--------- 155
            +P EI     LV     SN+L  LP ++ R   L +F   NN +T +P+D         
Sbjct: 362 TVPQEICLLLNLVFLGLGSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQV 421

Query: 156 --------------LADCSKMSKLDVEGNKLTV---------------LSNNL------- 179
                         +A   +++ L ++GN+++                   NL       
Sbjct: 422 LDLSNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNLLSRLPSE 481

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +     L  +  + N L   P+ +  +  L  LDL QN I S+P+S+    +L +F +  
Sbjct: 482 VKHMKSLQSVTITNNRLTQFPKELCEVRTLQFLDLSQNLISSVPASVRRLQNLEKFILNE 541

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N  +A+  E+  L  L +L +  NQ+ E C E     RL  LDLSNN     PPEI  + 
Sbjct: 542 NTFTAITPEMCTLKNLVSLSMSDNQITEICEEVSMYQRLEALDLSNNQFPVFPPEIWTIL 601

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR L       + +++S           +L+  +   +D E    + + +TM       
Sbjct: 602 RLRILHFIQE--KGVKAS-----------FLQPAIYNCQDLEEIYVQHNCLTM------- 641

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                        IP+ I    ++     S N + ++P       +L+ L L RN+IK  
Sbjct: 642 -------------IPNTIRSLSKLRIFCASDNCLMDIPEVFCELKNLEVLKLERNQIKSL 688

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P      LS L  L+LD NPL   PS+  +   M QI
Sbjct: 689 P-INFEMLSELRVLRLDTNPLAHPPSEVCEGGAMDQI 724


>gi|313229869|emb|CBY07574.1| unnamed protein product [Oikopleura dioica]
          Length = 622

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 237/523 (45%), Gaps = 61/523 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIM 104
           +L K  ++ N I+ +   +     L  +N+++N L +LP  +G++   LK L+VS NS+ 
Sbjct: 98  NLSKFDMSKNKIKSVPRSISKANKLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLK 157

Query: 105 KIPDEI----GSATA--------------------LVKFDCSSNQLKELPSSLGRCLNLS 140
           K+P  +    G+  A                    +     ++N ++E+P S  + + L 
Sbjct: 158 KLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALFLANNDIEEIPESFSKLMYLL 217

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN + SLP  + + + ++ LD+  N++  L  +       L  L  S N L  +P
Sbjct: 218 QLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLP 277

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            ++G+LS +  L+L  N+I +IP +I GC  L +F +  N L +    L  L+ L   +L
Sbjct: 278 NSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQNLLISC-DNLSGLASLEIANL 336

Query: 261 HSNQLKEYCVEACQLRL---SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            SN++     E  +L+L   + +DLS N LS           L  L L+G  L +L   +
Sbjct: 337 SSNRI----AEIAELKLDSIAQIDLSKNELSS-------CENLEDLKLSGCGLESLDEFI 385

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  L+        EN  SE STT   LI     L       +L    LS++P  I 
Sbjct: 386 -----SKLIFLQHIDFSENNISEISTT---LINRWRYLRTA----NLSKNQLSSLPKGIR 433

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
               + KLDLS N   E         +L  L L+ N I+  P      L SL  + L +N
Sbjct: 434 NMQHLGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKN-FGELKSLRFVDLSHN 492

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH--LQELYLRRMQLREAPTDI 494
            + ++PS+    I  L  L  + N I   P+N     L H  LQE+ L   +++E PT I
Sbjct: 493 EIEELPSEQLDTISSLHFLKATNNKITVFPDN-----LQHLRLQEIDLSDNEIKELPTAI 547

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             ++ +R ++L  NSL+ IP+  + + SL  L++  N +   P
Sbjct: 548 RNMKTVRKMNLQNNSLELIPDQIEKMASLRVLNIEGNFLRFYP 590



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 232/497 (46%), Gaps = 66/497 (13%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-----------DLQKLI 51
           ++ +  R    LN+S  SL+ +P  VY         D    ++            ++ L 
Sbjct: 138 KVGQIGRQLKILNVSGNSLKKLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALF 197

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           LA+N+IE++ E    L  L  L++++NK++ LP+ IG ++ L SLD+  N + ++P++ G
Sbjct: 198 LANNDIEEIPESFSKLMYLLQLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFG 257

Query: 112 S-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
               +L   + S N+L+ LP+SLG   ++ +   SNN I ++PE +  C ++ K D+  N
Sbjct: 258 RLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQN 317

Query: 171 --------------KLTVLSNNLIASWTML------------TELIASKNL--------- 195
                         ++  LS+N IA    L             EL + +NL         
Sbjct: 318 LLISCDNLSGLASLEIANLSSNRIAEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCG 377

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  + E I  L  L  +D  +N I  I ++ I+    L    +  N LS+LP  +  +  
Sbjct: 378 LESLDEFISKLIFLQHIDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPKGIRNMQH 437

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           LG LDL  N+  E+      LR L+ L L+NN +   P   G++ +LR + L+ N +  L
Sbjct: 438 LGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEEL 497

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            S  ++  T + L +L++      +++ +   ++L  +  RL    +E+ L    +  +P
Sbjct: 498 PSEQLD--TISSLHFLKA-----TNNKITVFPDNLQHL--RL----QEIDLSDNEIKELP 544

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           + I     + K++L  NS++ +P ++   ASL+ L +  N ++ +P    + +S    LK
Sbjct: 545 TAIRNMKTVRKMNLQNNSLELIPDQIEKMASLRVLNIEGNFLRFYPKCFASGMSKCEILK 604

Query: 434 LDN----NPLRQVPSDG 446
            +      P+  +P D 
Sbjct: 605 ENQRSKRKPIADLPEDA 621



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 219/497 (44%), Gaps = 87/497 (17%)

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           FN I K+P+ IG  + L   +   N +K++P S+G+  NLS F  S N I S+P  ++  
Sbjct: 60  FNVIKKVPNGIGKISRLRNLELQGNDIKKIPKSVGKLKNLSKFDMSKNKIKSVPRSISKA 119

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-------- 211
           +K+  +++  N L  L   +      L  L  S N L  +P+++  L   +         
Sbjct: 120 NKLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLKKLPKSVYVLRGAVNASDNKISS 179

Query: 212 ----------------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
                           L L  N I  IP S S    L +  + NN +++LP+ +G ++ L
Sbjct: 180 LPGVTSTKKTKPTIEALFLANNDIEEIPESFSKLMYLLQLDLANNKVASLPSTIGNINYL 239

Query: 256 GTLDLHSNQLKEYCVEACQLRLSV--LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +LDL +N++ E   +  +L+ S+  L+LS N L  LP  +G ++ + +L L+ N + T+
Sbjct: 240 TSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIATI 299

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
             ++       L+K+                 ++L+     LS  +   SLE  NLS+  
Sbjct: 300 PETIFG--CKRLIKF--------------DISQNLLISCDNLSGLA---SLEIANLSS-- 338

Query: 374 SEIWEAGE-----ITKLDLSRNSIQELPPELSSCASLQTLIL------------------ 410
           + I E  E     I ++DLS+N       ELSSC +L+ L L                  
Sbjct: 339 NRIAEIAELKLDSIAQIDLSKN-------ELSSCENLEDLKLSGCGLESLDEFISKLIFL 391

Query: 411 -----SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
                S N I +    ++     L    L  N L  +P  G +++  L  LDLS+N    
Sbjct: 392 QHIDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPK-GIRNMQHLGKLDLSFNKFTE 450

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSL 523
             EN  F  L  L EL L    ++  P +   L+ LR +DLS N ++ +P E    ++SL
Sbjct: 451 FDEN--FKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEELPSEQLDTISSL 508

Query: 524 TELDLSDNNISALPPEL 540
             L  ++N I+  P  L
Sbjct: 509 HFLKATNNKITVFPDNL 525



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 176/369 (47%), Gaps = 39/369 (10%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N++  +P  IG +SRL  L+L  N I  IP S+    +L++F M  N + ++P  + K +
Sbjct: 61  NVIKKVPNGIGKISRLRNLELQGNDIKKIPKSVGKLKNLSKFDMSKNKIKSVPRSISKAN 120

Query: 254 KLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLL-LTGNPL 310
           KL T++L++N L++   +  Q+  +L +L++S NSL  LP  +     LR  +  + N +
Sbjct: 121 KLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLKKLPKSV---YVLRGAVNASDNKI 177

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L        T   ++ L   L  N+  E   +   L+ +         +L L    ++
Sbjct: 178 SSLPGVTSTKKTKPTIEALF--LANNDIEEIPESFSKLMYLL--------QLDLANNKVA 227

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSL 429
           ++PS I     +T LDL  N + ELP +      SLQ L LS NK++  P++ L +LS +
Sbjct: 228 SLPSTIGNINYLTSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLPNS-LGTLSHI 286

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN---------------IASLPENPPFSSL 474
             L L NN +  +P   F    +++  D+S N               IA+L  N     +
Sbjct: 287 EELNLSNNQIATIPETIFGCKRLIK-FDISQNLLISCDNLSGLASLEIANLSSN----RI 341

Query: 475 PHLQELYLRRM-QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
             + EL L  + Q+  +  ++   + L  L LS   L+S+ E    L  L  +D S+NNI
Sbjct: 342 AEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCGLESLDEFISKLIFLQHIDFSENNI 401

Query: 534 SALPPELVS 542
           S +   L++
Sbjct: 402 SEISTTLIN 410


>gi|356503642|ref|XP_003520615.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Glycine max]
          Length = 1026

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 242/529 (45%), Gaps = 46/529 (8%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNS-I 103
           ++ L L+H N+  ++  D++ L  LT LN+  N  S  LP +I  L  L SLDVS N  I
Sbjct: 82  VEILDLSHKNLSGRVSNDIQRLKSLTSLNLCCNAFSTPLPKSIANLTTLNSLDVSQNFFI 141

Query: 104 MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRC--LNLSDFKASNNCITSLPEDLADCS 160
              P  +G A  LV  + SSN+    LP  L     L + D + S   + S+P+  ++  
Sbjct: 142 GNFPLALGRAWRLVALNASSNEFSGSLPEDLANASSLEVLDLRGSF-FVGSVPKSFSNLH 200

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLIRLDLH-QNR 218
           K+  L + GN LT      +   + L  +I   N    G+PE  G+L+ L  LDL   N 
Sbjct: 201 KLKFLGLSGNNLTGKIPGELGQLSSLEYMILGYNEFEGGIPEEFGNLTNLKYLDLAVANL 260

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLK-EYCVEACQLR 276
              IP  +     L   ++ NN     +P  +  ++ L  LDL  N L  +   E  QL+
Sbjct: 261 GGEIPGGLGELKLLNTVFLYNNNFEGRIPPAISNMTSLQLLDLSDNMLSGKIPAEISQLK 320

Query: 277 -LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY------ 328
            L +L+   N LSG +PP  G +  L  L L  N L        +GP P+ L        
Sbjct: 321 NLKLLNFMGNKLSGPVPPGFGDLPQLEVLELWNNSL--------SGPLPSNLGKNSHLQW 372

Query: 329 -------LRSRLPENEDSEASTTKEDLITMATRLSVTSK--------ELSLEGMNLSA-I 372
                  L   +PE   S+ + TK  L   A   S+ S          + ++   LS  +
Sbjct: 373 LDVSSNSLSGEIPETLCSQGNLTKLILFNNAFTGSIPSSLSMCPSLVRVRIQNNFLSGTV 432

Query: 373 PSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           P  + + G++ +L+L+ NS+   +P ++SS  SL  + LSRNK+     + + S+ +L  
Sbjct: 433 PVGLGKLGKLQRLELANNSLSGGIPDDISSSTSLSFIDLSRNKLHSSLPSTVLSIPNLQA 492

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EA 490
             + NN L     D F+D P L +LDLS N  S       +S   L  L L+  QL  E 
Sbjct: 493 FMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEI 552

Query: 491 PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 538
           P  + ++  L +LDLS NSL   IPE F    +L  L++S N +    P
Sbjct: 553 PKALGKMPTLAMLDLSNNSLTGQIPESFGISPALEALNVSFNKLEGPVP 601



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           +   P  +  A  +  L+ S N     LP +L++ +SL+ L L  +          ++L 
Sbjct: 141 IGNFPLALGRAWRLVALNASSNEFSGSLPEDLANASSLEVLDLRGSFFVGSVPKSFSNLH 200

Query: 428 SLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRR 484
            L  L L  N L  ++P +    +  L+ + L YN     +PE   F +L +L+ L L  
Sbjct: 201 KLKFLGLSGNNLTGKIPGE-LGQLSSLEYMILGYNEFEGGIPEE--FGNLTNLKYLDLAV 257

Query: 485 MQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPPELVS 542
             L  E P  +  L+ L  + L  N+ +  IP    N+TSL  LDLSDN +S   P  +S
Sbjct: 258 ANLGGEIPGGLGELKLLNTVFLYNNNFEGRIPPAISNMTSLQLLDLSDNMLSGKIPAEIS 317


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 137/264 (51%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+ N I+ + +++  L  L  L +  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQ+K +P  + +   L      NN +T+LP+++     +  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L +L    N L  +P  IG L  L  L+L  NR+ ++   
Sbjct: 215 DLSTNRLTTLPQE-IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+  P E+G+L  L  LDL SNQL        QL+ L VL L+N
Sbjct: 274 IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNN 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L+ LP EIG++  L++L L  N
Sbjct: 334 NQLTTLPKEIGQLKNLQELYLNNN 357



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 149/302 (49%), Gaps = 15/302 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS    + +P E+ K               +LQ+L L  N +  L +++  L  L  
Sbjct: 52  TLDLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRK 98

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N++  +P  I +L  L+ L +  N +  +P EIG    L       NQL  LP  
Sbjct: 99  LNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 158

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N I ++P+++    K+  L ++ N+LT L    I     L  L  S
Sbjct: 159 IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE-IGQLQNLQSLDLS 217

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++  +P+ I    +L    + NN L+ L  E+ +L
Sbjct: 218 TNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 277

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L +LDL SNQL  +  E  QL+ L VLDL +N L+ LP  IG++  L+ L L  N L 
Sbjct: 278 QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLT 337

Query: 312 TL 313
           TL
Sbjct: 338 TL 339



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 161/358 (44%), Gaps = 39/358 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI-- 274

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P EI + 
Sbjct: 275 --------------------------EQLQNL--------KSLDLRSNQLTIFPKEIGQL 300

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
             +  LDL  N +  LP  +    +L+ L L+ N++   P  I   L +L  L L+NN
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKEI-GQLKNLQELYLNNN 357



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L  N L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 273

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  L L++N ++ LP E+
Sbjct: 313 LTTLPEGIGQLQNLKVLFLNNNQLTTLPKEI 343



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 24/220 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+                         P+ IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTI------------------------FPKEIGQLKNLQVLDLGSNQLTTLPEG 319

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L   ++ NN L+ LP E+G+L  L  L L++NQ 
Sbjct: 320 IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQF 359



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 43/370 (11%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +  S    +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    
Sbjct: 31  ESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE- 89

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L +L  S N +  +P+ I  L +L  L L +N++ ++P  I     L   Y+  
Sbjct: 90  IGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPK 149

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++ 
Sbjct: 150 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 209

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L+ N L TL         P  + +L++              +DL  ++ +L++ 
Sbjct: 210 NLQSLDLSTNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI- 246

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
                        +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +
Sbjct: 247 -------------LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 293

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P  I   L +L  L L +N L  +P +G   +  L++L L+ N + +LP+      L +L
Sbjct: 294 PKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLQNLKVLFLNNNQLTTLPK--EIGQLKNL 349

Query: 478 QELYLRRMQL 487
           QELYL   Q 
Sbjct: 350 QELYLNNNQF 359



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+SE+ T  +    +   L V +  L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKVRT--LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +L+ L LS N+IK  P  I   L  L  L L  N L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQWLYLPKNQLTTLPQE-IGQLQKLQWL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  LDLS N ++ LP E+
Sbjct: 204 EIGQLQNLQSLDLSTNRLTTLPQEI 228


>gi|67468662|ref|XP_650359.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
 gi|56466974|gb|EAL44972.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
          Length = 861

 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 235/530 (44%), Gaps = 74/530 (13%)

Query: 75  VSHNK-LSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V H K L+E P      EL  +  +DVS N I +IP +I S   L KF  + N +K LPS
Sbjct: 10  VKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPS 69

Query: 132 SLG---------------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +                      +  +L++   S N IT + +D      +  +D+  N
Sbjct: 70  QINIPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSIN 129

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  +  +L +  T LT +  S NLL   P  +  LS LI L + +N+I +IP+ +S   
Sbjct: 130 RIQSVPKHL-SKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMS 188

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L    + NN +  +   L KL+KL  LD+ +N + E   +   L  +  +D+S + L  
Sbjct: 189 NLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKT 248

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPE 335
           LP     +  LRKL        TL+ + V  P   L K+ +              + LP 
Sbjct: 249 LPKSFMSLVGLRKL--------TLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 336 NEDSEASTTK------EDLITMATRLSVTS---------------KELSLEGMNLSAIPS 374
           + D + S  +       D+     +L++                 K L L+   L +IP 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           E++    +T LDLS NS    P  +++C +L  L +S N +   PD   +  + L  L L
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYSCFAKLEALLL 420

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N + ++P +   ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P  
Sbjct: 421 GINIIDRLP-ETMNELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEK 477

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              L  L IL+LS N ++ I     NL  + +LDLS N I   P +L  +
Sbjct: 478 FSLLTNLEILELSCNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM 526



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 187/420 (44%), Gaps = 60/420 (14%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L +  N I  +   +  +  L +L++S+NK+ ++  ++ +L  L  LDVS N I +I D+
Sbjct: 170 LKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQ 229

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-- 167
           I + T + + D S + LK LP S    + L      +  +   P  L   +K+S+L++  
Sbjct: 230 IQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSN 289

Query: 168 -EGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            E  K+T L  S ++  S   + EL         +P+   S+    +L+L QNR+   P 
Sbjct: 290 GEFEKVTELPCSGDIDLSCNQIVEL--------DLPDMEYSIH---KLNLGQNRLKDFP- 337

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 282
           +I     +    +  N L ++P E+   + L  LDL SN    +   +  C   L VL++
Sbjct: 338 NIKCLREIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSITTCT-NLVVLNM 396

Query: 283 SNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           SNN L  LP         L  LLL  N +                     RLPE      
Sbjct: 397 SNNYLDSLPDISYSCFAKLEALLLGINII--------------------DRLPE------ 430

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             T  +L  + T        L LE   LS IP  ++   ++ +L L+ N I ELP + S 
Sbjct: 431 --TMNELTNLTT--------LHLEHNKLSKIPESLFSMTKLVELFLNCNQIPELPEKFSL 480

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
             +L+ L LS N IK+    +  +L  +  L L  N + + PSD    +  L+ LDLSYN
Sbjct: 481 LTNLEILELSCNYIKEITPIV--NLVGVKDLDLSTNQIEKCPSD-LCGMTSLRSLDLSYN 537



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 30/186 (16%)

Query: 358 TSKELSLEGMNLSAIPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           T  ++     NL+  P E    E   +  +D+S N IQE+P +++S   LQ    + N I
Sbjct: 5   TETKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMI 64

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           K  P  I                          +IP L+ LDLS N   L        L 
Sbjct: 65  KTLPSQI--------------------------NIPSLKTLDLSSN--HLKRFCKSIKLT 96

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L E+ L   Q+ +   D   L  LR +DLS N +QS+P+    LTSLT +D+S+N +++
Sbjct: 97  SLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTS 156

Query: 536 LPPELV 541
            P  L+
Sbjct: 157 FPTPLL 162


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 37/379 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++S   ++E+P  IG+L  L+ LD+  N I +IP+ IG  T L K     N++ E+
Sbjct: 19  VTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEI 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +  NL       N IT +PE +   + + KL +  N++T +    I     L  L
Sbjct: 79  PGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPK-FIGYLNNLQLL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S+N +  +PE I  L+ L  L LH N+I  IP  I    +L    +  N ++ +P  +
Sbjct: 138 GLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFI 197

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           GKL+ L  L L  NQ+ E                      +P  IGK+T L+ L   GN 
Sbjct: 198 GKLTNLQNLGLTGNQITE----------------------IPEFIGKLTNLQLLYFGGNQ 235

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +  +   +       +L   ++++         T   + I     L +    L+L    +
Sbjct: 236 ITEMPECIGQLNNLQILNLWKNQI---------TEMPECIGQLNNLQI----LNLWKNQI 282

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + IP  I +   + +LDL  N I E+P  +    +LQ L L+ N+I + P+ I   L++L
Sbjct: 283 TEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECI-GQLTNL 341

Query: 430 SCLKLDNNPLRQVPSDGFK 448
             L LDNNPL  V    ++
Sbjct: 342 QKLILDNNPLNPVVRSAYQ 360



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 4   ILKAARTSGS-LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           I KAAR   + L+LS + + ++P  +              +  +LQ+L L  N I ++ E
Sbjct: 11  IEKAAREGVTELDLSGKGITEIPECIG-------------QLTNLQELDLRENQITEIPE 57

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L  L +  NK++E+P  I +L  L+ L +  N I +IP+ IG  T L K   S
Sbjct: 58  CIGQLTNLKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLS 117

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQ+ E+P  +G   NL     S N IT +PE ++  + +  L +  NK+T +    I  
Sbjct: 118 ANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIP-ECIGQ 176

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T L  L+   N +  +PE IG L+ L  L L  N+I  IP  I    +L   Y G N +
Sbjct: 177 LTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQI 236

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +P  +G+L+ L  L+L  NQ+ E      QL  L +L+L  N ++ +P  IG++  L+
Sbjct: 237 TEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLNNLQ 296

Query: 302 KLLLTGNPL 310
           +L L  N +
Sbjct: 297 ELDLDDNKI 305



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 167/357 (46%), Gaps = 48/357 (13%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           +TEL  S   +  +PE IG L+ L  LDL +N+I  IP  I    +L +  +G N ++ +
Sbjct: 19  VTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEI 78

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P  + +L+ L  L L  NQ+ E                      +P  IG++T L+KL L
Sbjct: 79  PGCISQLTNLRFLGLWENQITE----------------------IPEFIGQLTNLKKLSL 116

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKE 361
           + N +  +         P  + YL +     L  N+ +E      + I+  T L    + 
Sbjct: 117 SANQITEI---------PKFIGYLNNLQLLGLSRNQITEIP----ECISQLTNL----QN 159

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L    ++ IP  I +   +  L L  N I E+P  +    +LQ L L+ N+I + P+ 
Sbjct: 160 LYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEF 219

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I   L++L  L    N + ++P +    +  LQIL+L  N I  +PE      L +LQ L
Sbjct: 220 I-GKLTNLQLLYFGGNQITEMP-ECIGQLNNLQILNLWKNQITEMPEC--IGQLNNLQIL 275

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L + Q+ E P  I +L  L+ LDL  N +  IPE    L +L EL L++N I+ +P
Sbjct: 276 NLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIP 332



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 175/406 (43%), Gaps = 64/406 (15%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E  +   + + D S   + E+P  +G+  NL +     N IT +PE +   + + KL + 
Sbjct: 12  EKAAREGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIG 71

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+T +    I+  T L  L   +N +  +PE IG L+ L +L L  N+I  IP  I  
Sbjct: 72  KNKITEIPG-CISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGY 130

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L    +  N ++ +P  + +L+ L  L LH N++ E                     
Sbjct: 131 LNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITE--------------------- 169

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            +P  IG++T L+ L+L GN +                    + +PE             
Sbjct: 170 -IPECIGQLTNLQNLVLIGNQI--------------------TEIPE------------F 196

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           I   T L    + L L G  ++ IP  I +   +  L    N I E+P  +    +LQ L
Sbjct: 197 IGKLTNL----QNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQIL 252

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            L +N+I + P+ I   L++L  L L  N + ++P +    +  LQ LDL  N I  +PE
Sbjct: 253 NLWKNQITEMPECI-GQLNNLQILNLWKNQITEIP-ECIGQLNNLQELDLDDNKITEIPE 310

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
                 L +LQEL L   Q+ E P  I +L  L+ L L  N L  +
Sbjct: 311 C--IGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPLNPV 354



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 28/214 (13%)

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I  A R  VT  EL L G  ++ IP  I +   + +LDL  N I E+P  +    +L+
Sbjct: 9   EIIEKAAREGVT--ELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLK 66

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP---------------SDGFKDIP 451
            LI+ +NKI + P  I + L++L  L L  N + ++P               ++   +IP
Sbjct: 67  KLIIGKNKITEIPGCI-SQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIP 125

Query: 452 M-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
                   LQ+L LS N I  +PE    S L +LQ LYL   ++ E P  I +L  L+ L
Sbjct: 126 KFIGYLNNLQLLGLSRNQITEIPEC--ISQLTNLQNLYLHDNKITEIPECIGQLTNLQNL 183

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L  N +  IPE    LT+L  L L+ N I+ +P
Sbjct: 184 VLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIP 217



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 73/127 (57%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L    N I ++ E +  L  L +LN+  N+++E+P  IG+L+ L+ L++  N I +
Sbjct: 225 NLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITE 284

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ IG    L + D   N++ E+P  +G+ +NL +   + N IT +PE +   + + KL
Sbjct: 285 IPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKL 344

Query: 166 DVEGNKL 172
            ++ N L
Sbjct: 345 ILDNNPL 351


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 198/430 (46%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  SL+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTSLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  L
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+N++  LP  IG +  L  L +  
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCE-SLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+  G   A+           ED + S  + + +  +    +  +  + +  
Sbjct: 286 NQLMYLPDSI--GGLTAI-----------EDLDCSFNEIEALPSSIGHLIQIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI      T L L  N ++ LP E+     L+ + LS N++++ P +  T L 
Sbjct: 333 FLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFS-FTRLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 199/457 (43%), Gaps = 98/457 (21%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + SLD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTILPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L                       
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERL----------------------- 189

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                 L  NE +E     E L  +        KE  ++G  L+ IP  +    ++T LD
Sbjct: 190 -----DLGSNEFTEVPEVLEQLSGL--------KEFWMDGNKLTYIPGFLGNLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ-----LREAPTDILRLQQL 500
              +  ++ LD S+N I +LP     SS+ HL  + +R        L + P +I   +  
Sbjct: 295 IGGLTAIEDLDCSFNEIEALP-----SSIGHL--IQIRTFAADHNFLTQLPPEIGTWKSA 347

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +L L  N L+S+PE   ++  L  ++LSDN +  LP
Sbjct: 348 TVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLP 384



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 20/242 (8%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLP 475
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P  F  L 
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPANFGRLT 161

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++ 
Sbjct: 162 KLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY 221

Query: 536 LP 537
           +P
Sbjct: 222 IP 223


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 164/366 (44%), Gaps = 39/366 (10%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
            +  +L+ +P AIG L  L+ L+++ + +  +P EIG    L     + N+L  LP  +G
Sbjct: 56  FNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIG 115

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL     S N +TSLP+++     + +LD+  N+ T L    I     L EL  S N
Sbjct: 116 QLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKE-IGQLQNLQELDLSGN 174

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
               +P+ IG L  L +LDL  NR  ++P  +    SL E  +  N  + LP E+ +   
Sbjct: 175 QFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQN 234

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +  L+L  NQL     E  Q + L  LDLS N  + LP EIG++  L  L L+GN   T 
Sbjct: 235 IRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTF 294

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +              R  EN            IT           L L+   L A+P
Sbjct: 295 PKEV--------------RRQEN------------ITW----------LYLDDNQLKALP 318

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI +   +  L L  N +  LP E+    +LQ L LS+N+   +P  I   L +L  L+
Sbjct: 319 KEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEI-EQLQNLKLLR 377

Query: 434 LDNNPL 439
           L +N  
Sbjct: 378 LYSNSF 383



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 134/269 (49%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  + +  L +++  L  L  L ++ N+LS LP  IG+L  LK L +S N +  
Sbjct: 73  NLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTS 132

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D SSN+   LP  +G+  NL +   S N  T+LP+++     + KL
Sbjct: 133 LPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKL 192

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+ T L    +     L EL  S N    +P+ I     +  L+L  N++ S+   
Sbjct: 193 DLSNNRFTTLPKE-VGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKE 251

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRLSVLDLSN 284
           I    +L    +  N  + LP E+G+L  L TL+L  N+   +  E   Q  ++ L L +
Sbjct: 252 IGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDD 311

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  LP EIG+   L  L L GN L +L
Sbjct: 312 NQLKALPKEIGQFQHLEGLFLKGNQLTSL 340



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 132/288 (45%), Gaps = 23/288 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L  L +S N+L+ LP  IG+L  L+ LD+S N    
Sbjct: 96  NLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTT 155

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D S NQ   LP  +G+  NL     SNN  T+LP+++     + +L
Sbjct: 156 LPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEEL 215

Query: 166 DVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETI 203
           D+ GN+ T L   +                      I  +  L  L  SKN    +P+ I
Sbjct: 216 DLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEI 275

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L+L  NR  + P  +    ++   Y+ +N L ALP E+G+   L  L L  N
Sbjct: 276 GQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGN 335

Query: 264 QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           QL     E      L  LDLS N  +  P EI ++  L+ L L  N  
Sbjct: 336 QLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSF 383



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 185/417 (44%), Gaps = 87/417 (20%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           F  +  QL  +P+++GR  NL   + + + +TSLP+++     +  L +  N+L+ L   
Sbjct: 54  FLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSL--- 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ IG L  L RL L  N++ S+P  I    +L E  + 
Sbjct: 111 ---------------------PQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLS 149

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N  + LP E+G+L  L  LDL  NQ      E  QL+ L  LDLSNN  + LP E+G++
Sbjct: 150 SNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQL 209

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L +L L+GN   TL         P   K +R R               L     +L+ 
Sbjct: 210 QSLEELDLSGNQFTTL---------P---KEIRRR----------QNIRWLNLAGNQLTS 247

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
            SK              EI +   +  LDLS+N    LP E+    +L+TL LS N+   
Sbjct: 248 LSK--------------EIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTT 293

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 477
           +P  +     +++ L LD+N L+ +P    K+I   Q                     HL
Sbjct: 294 FPKEVRRQ-ENITWLYLDDNQLKALP----KEIGQFQ---------------------HL 327

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           + L+L+  QL   P +I +LQ L+ LDLS+N   + P+  + L +L  L L  N+ S
Sbjct: 328 EGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFS 384



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 46/343 (13%)

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           PE +  LS L     ++ ++ SIP++I    +L    +  + L++LP E+G+L  L  L 
Sbjct: 46  PENVFELSFL----FNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLF 101

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L+ N+L     E  QL+ L  L LS N L+ LP EIG++  L++L L+ N   TL     
Sbjct: 102 LNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTL----- 156

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
               P  +  L++                            +EL L G   + +P EI +
Sbjct: 157 ----PKEIGQLQN---------------------------LQELDLSGNQFTTLPKEIGQ 185

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + KLDLS N    LP E+    SL+ L LS N+    P  I     ++  L L  N 
Sbjct: 186 LQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEI-RRRQNIRWLNLAGNQ 244

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  + S        LQ LDLS N   +LP+      L +L+ L L   +    P ++ R 
Sbjct: 245 LTSL-SKEIGQFQNLQGLDLSKNRFTTLPK--EIGQLQNLETLNLSGNRFTTFPKEVRRQ 301

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + +  L L  N L+++P+       L  L L  N +++LP E+
Sbjct: 302 ENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLPKEI 344



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N    L +++  L  L  L++S+N+ + LP  +G+L  L+ LD+S N    
Sbjct: 165 NLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTT 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     +   + + NQL  L   +G+  NL     S N  T+LP+++     +  L
Sbjct: 225 LPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH---------- 215
           ++ GN+ T      +     +T L    N L  +P+ IG    L  L L           
Sbjct: 285 NLSGNRFTTFPKE-VRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLPKE 343

Query: 216 -------------QNRILSIPSSISGCCSLAEFYMGNNALS 243
                        +NR  + P  I    +L    + +N+ S
Sbjct: 344 IEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFS 384



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N    L +++  L  L  LN+S N+ +  P  +     +  L +  N +  
Sbjct: 257 NLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKA 316

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  + +  NL     S N  T+ P+++     +  L
Sbjct: 317 LPKEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLL 376

Query: 166 DVEGNKLTV 174
            +  N  ++
Sbjct: 377 RLYSNSFSL 385


>gi|161086957|ref|NP_766467.2| leucine-rich repeat and death domain-containing protein 1 [Mus
           musculus]
 gi|341940918|sp|Q8C0R9.2|LRRD1_MOUSE RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|187954881|gb|AAI41027.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
 gi|219520514|gb|AAI45171.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
          Length = 853

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 229/494 (46%), Gaps = 25/494 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L  ++N I ++ ++L  L  +  L ++ N +  LP+ +  L  L++L +  N +  
Sbjct: 206 NLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTY 265

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD + S   L   +   NQL     SL     L+    + N I SLP+++ +   +  L
Sbjct: 266 IPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESL 325

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ NKLT L+   I     + EL  + N L  +   I +   L  L+L +N + SIP  
Sbjct: 326 LMDHNKLTFLAVE-IFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKK 384

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           IS C +L    + +N +  LP ++ KL  L  L ++ N++     E   L  + +L+ S 
Sbjct: 385 ISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSG 444

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P EI     + ++ L  N +      L    +   L +  + + E         
Sbjct: 445 NQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE--------- 495

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I +    S     L L    L+     +     +  LDL++N I  +P  +S+  S
Sbjct: 496 ----IPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVS 551

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  LILS NK + +P   L SL +L  L +  N L+++P +  K +  +Q L+LS NI +
Sbjct: 552 LHVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEISK-LKRIQKLNLSNNIFT 609

Query: 465 LPENPPFS--SLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
              N P     L  L+EL + +    +L   P ++  + QL+IL++S N+++ IP+    
Sbjct: 610 ---NFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDIPKNIGE 666

Query: 520 LTSLTELDLSDNNI 533
           L SL     S+N I
Sbjct: 667 LRSLVSFYASNNQI 680



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 71/538 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE-DLRNLPLLT 71
           ++NL  + L++ P ++ K                ++ L L  N I+  +  D  +L  L 
Sbjct: 139 TVNLDAKGLQEFPVDIVK-------------VKYVKYLYLDKNQIKNFQGIDPGDLLGLE 185

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS +P  I   H LK L+ S+N I +IP E+     + +   +SN +  LPS
Sbjct: 186 ILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPS 245

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L     L       N +T +P+ L+    +  L++E N+LT+ S +L      L  L  
Sbjct: 246 GLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSL-CFLPKLNSLNL 304

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N++  +P+ +  L  L  L +  N++  +   I     + E ++ +N L A+  ++  
Sbjct: 305 TGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIEN 364

Query: 252 LSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +L  L+L  N L+       +CV      L  L LS+N++  LP +I K+  LR+L +
Sbjct: 365 FKELRLLNLDKNLLQSIPKKISHCV-----NLESLSLSDNNIEELPKKIRKLKNLRQLHV 419

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELS 363
             N                                       +ITM   +S  S    L 
Sbjct: 420 NRN--------------------------------------KMITMTEEISHLSNIHILE 441

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
             G  ++ +P EI    +IT+++L+ N+I   P  L +  SL  L  + N I + P  + 
Sbjct: 442 FSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMS 501

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
            S   L  L+L+ N L  V S     +  L+ LDL+ N I ++P     S++  L  L L
Sbjct: 502 FS-KQLLHLELNRNKL-TVFSKHLCSLTNLEYLDLAKNQIMTIPS--CISAMVSLHVLIL 557

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              +    P ++  L+ LR+LD+S+N LQ IP     L  + +L+LS+N  +  P EL
Sbjct: 558 SDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVEL 615



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 186/417 (44%), Gaps = 59/417 (14%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NNIE+L + +R L  L  L+V+ NK+  +   I  L  +  L+ S
Sbjct: 384 KISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFS 443

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P D++  
Sbjct: 444 GNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFS 503

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NKLTV S +L                         SL+ L  LDL +N+I
Sbjct: 504 KQLLHLELNRNKLTVFSKHLC------------------------SLTNLEYLDLAKNQI 539

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
           ++IPS IS   SL    + +N   + P EL  L  L  LD+  N+L++  +E  +L R+ 
Sbjct: 540 MTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQ 599

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L+LSNN  +  P E+ ++ TL +L ++    + L                 +RLPE   
Sbjct: 600 KLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKL-----------------TRLPEE-- 640

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     ++  T+L +    L++    +  IP  I E   +     S N I  LP  
Sbjct: 641 ----------VSHMTQLKI----LNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSS 686

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             S   LQ+L L  N +   P  I   LSSL  +  D+NPL + P +  K   M  I
Sbjct: 687 FLSLEVLQSLDLRGNNMTALPSGIY-KLSSLKEINFDDNPLMRPPMEICKGKEMHMI 742



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 211/498 (42%), Gaps = 67/498 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N I  L +++R L  L  L + HNKL+ L   I +L  +K L ++ N +  I
Sbjct: 299 LNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI 358

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             +I +   L   +   N L+ +P  +  C+NL     S+N I  LP+ +     + +L 
Sbjct: 359 SPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLH 418

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NK+  ++   I+  + +  L  S N +  +P  I +  ++ R++L+ N I+  P  +
Sbjct: 419 VNRNKMITMTEE-ISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGL 477

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL       N +S +P ++    +L  L+L+ N+L  +    C L  L  LDL+ N
Sbjct: 478 CALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKN 537

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  +P  I  M +L  L+L+ N   +    L +      LK LR               
Sbjct: 538 QIMTIPSCISAMVSLHVLILSDNKFESFPKELCS------LKNLRV-------------- 577

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                           L +    L  IP EI +   I KL+LS N     P EL    +L
Sbjct: 578 ----------------LDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTL 621

Query: 406 QTLILSR---NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           + L +S+    K+   P+ + + ++ L  L + NN ++ +P +                 
Sbjct: 622 EELNISQTSGKKLTRLPEEV-SHMTQLKILNISNNAIKDIPKN----------------- 663

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                      L  L   Y    Q+   P+  L L+ L+ LDL  N++ ++P G   L+S
Sbjct: 664 --------IGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSS 715

Query: 523 LTELDLSDNNISALPPEL 540
           L E++  DN +   P E+
Sbjct: 716 LKEINFDDNPLMRPPMEI 733


>gi|3894383|gb|AAC78591.1| disease resistance protein [Solanum lycopersicum var. cerasiforme]
          Length = 968

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 246/516 (47%), Gaps = 36/516 (6%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L++NNI   +  ++ NL  L  L+++ N++S  +P  IG L  L+ + + FN+ +
Sbjct: 97  LENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRI-FNNHL 155

Query: 105 K--IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EIG   +L K     N L   +P+SLG   NLS  F   N     +PE++    
Sbjct: 156 NGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLR 215

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            ++KL ++ N L+      + +   L+ L    N L+G +PE IG L  L +L L  N +
Sbjct: 216 SLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFL 275

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-- 275
             SIP+S+    +L+   + NN LS  +P E+G L  L  LDL  N L      +     
Sbjct: 276 SGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPSSLGNLN 335

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            LS LDL NN LSG +P EIG + +L  L L  N L        NG  PA L  L +   
Sbjct: 336 NLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENAL--------NGSIPASLGNLNNLFM 387

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N+ S +   +   ++  T L + +  L+       +IP+ +     +  L L  N
Sbjct: 388 LYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLN------GSIPASLGNLNNLFMLYLYNN 441

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
            +   +P E+   +SL  L L  N +     A L +L++LS L L NN L       F +
Sbjct: 442 QLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGN 501

Query: 450 IPMLQILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQ 507
           +  LQ L LS N   + E P F  +L  L+ LY+ R  L+ + P  +  +  L IL +S 
Sbjct: 502 MRNLQTLFLSDN-DLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSS 560

Query: 508 NSLQS-IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           NS +  +P    NLTSL  LD   NN+    P+   
Sbjct: 561 NSFRGELPSSISNLTSLKILDFGRNNLEGAIPQFFG 596



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 242/514 (47%), Gaps = 40/514 (7%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLK--SLDVSFNS 102
           L KL L  N +   +   L N+  L+ L +  N+LS  +P  IG L  L   SLD++F S
Sbjct: 169 LTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLS 228

Query: 103 IMKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP  +G+   L      +NQL   +P  +G   +L+      N ++ S+P  L + +
Sbjct: 229 -GSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLN 287

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +S+LD+  NKL+      I     LT L   +N LNG +P ++G+L+ L RLDL+ N++
Sbjct: 288 NLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPSSLGNLNNLSRLDLYNNKL 347

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-- 275
             SIP  I    SL    +G NAL+  +PA LG L+ L  L L++NQL     E      
Sbjct: 348 SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLS 407

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+ L L NNSL+G +P  +G +  L  L L  N L        +G  P  + YL S   
Sbjct: 408 SLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQL--------SGSIPEEIGYLSSLTE 459

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N  + +       +   +RL + + +LS       +IP+       +  L LS N
Sbjct: 460 LFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLS------GSIPASFGNMRNLQTLFLSDN 513

Query: 391 S-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFK 448
             I E+P  + +  SL+ L +SRN +K      L ++S L  L + +N  R ++PS    
Sbjct: 514 DLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSS-IS 572

Query: 449 DIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDL 505
           ++  L+ILD   N    ++P+   F ++  LQ   ++  +L    PT+      L  L+L
Sbjct: 573 NLTSLKILDFGRNNLEGAIPQ--FFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNL 630

Query: 506 SQNSL-QSIPEGFKNLTSLTELDLSDNNISALPP 538
             N L   IP    N   L  LDL DN ++   P
Sbjct: 631 HGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFP 664



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 213/490 (43%), Gaps = 77/490 (15%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L + +N L   +PA++G L+ L  L +  N +
Sbjct: 384 NLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQL 443

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG  ++L +    +N L   +P+SLG   NLS     NN ++ S+P    +  
Sbjct: 444 SGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMR 503

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  N L     + + + T L  L  S+N L G +P+ +G++S L  L +  N  
Sbjct: 504 NLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSF 563

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLD------------------ 259
              +PSSIS   SL     G N L  A+P   G +S L   D                  
Sbjct: 564 RGELPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGC 623

Query: 260 ------LHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNP 309
                 LH N+L +     ++ C+ +L VLDL +N L+   P  +G +  LR L LT N 
Sbjct: 624 SLISLNLHGNELADEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNK 682

Query: 310 LRT-LRSSLVNGPTPAL---------------------LKYLRSRLPENEDSEASTTKED 347
           L   +RSS      P L                     LK +R+     E+    +  +D
Sbjct: 683 LHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDD 742

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQ 406
            + + T      K L LE + + ++          T +DLS N  +  +P  L    +++
Sbjct: 743 SVVVVT------KGLELEIVRILSL---------YTIIDLSSNKFEGHIPSVLGDLIAIR 787

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--AS 464
            L +S N ++ +  + L SLS L  L L  N L          +  L++L+LS+N     
Sbjct: 788 VLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGC 847

Query: 465 LPENPPFSSL 474
           +P+ P F + 
Sbjct: 848 IPQGPQFRTF 857



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 26/253 (10%)

Query: 70  LTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQLK 127
           L  LN+  N+L+ E+P ++     L+ LD+  N +    P  +G+   L     +SN+L 
Sbjct: 625 LISLNLHGNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLH 684

Query: 128 ELPSSLG--------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               S G        R ++LS    S +  TSL E L     + K   E +  +   +++
Sbjct: 685 GPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSV 744

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
           +         + +K L     E +  LS    +DL  N+    IPS +    ++    + 
Sbjct: 745 V---------VVTKGL---ELEIVRILSLYTIIDLSSNKFEGHIPSVLGDLIAIRVLNVS 792

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIG 295
           +NAL   +P+ LG LS L +LDL  NQL     +  A    L VL+LS+N L G  P+  
Sbjct: 793 HNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQGP 852

Query: 296 KMTTLRKLLLTGN 308
           +  T       GN
Sbjct: 853 QFRTFESNSYEGN 865


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 42/407 (10%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           +E+L E++  L  L VL ++   +  LPA+IG+L  L+ LD+    + ++P+E+G    L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNL 153

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
              + S+NQL+ELP S+G+   L     S+N +  LP + +  +++ +L +  N L+ L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLP 213

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           +N       L  L  S+N L+ +P ++G L +L  L+L  N +  IP+ I    SL E  
Sbjct: 214 SN-FGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELD 272

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + +N +  LP E+G+L  L +L +  N+L +   E  QL+ L  L L  N L  LP   G
Sbjct: 273 LSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIALPINFG 332

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K++ L +L L+ N L  L  S+        LK L S                       L
Sbjct: 333 KLSQLEELQLSENKLEALPKSIKR------LKKLSS-----------------------L 363

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           ++ + E+ L        P        +  LDL  N I+ELP E+S   +L+ LIL  N++
Sbjct: 364 NLGNNEIYL-------FPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNEL 416

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           ++ P   L  L++L  L++ +N     P   ++   M Q+ DL  N+
Sbjct: 417 RNLP-PYLQDLTALRRLEISDNEFETFPEVLYQ---MRQLNDLILNV 459



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 172/378 (45%), Gaps = 38/378 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL    I++L   +  L  L +L++ + +L ELP  +G+L  L++L++S N + +
Sbjct: 106 NLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNLEALNLSANQLEE 165

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG   AL   D SSN+L+ELP+   +   L +   +NN ++ LP +      +  L
Sbjct: 166 LPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTL 225

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L  +L      L  L    N L  +P  IG L  L+ LDL  N I  +P  
Sbjct: 226 QLSENQLDQLPASL-GQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPE 284

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L   ++  N LS LP E  +L  L  L L  N+L    +   +L +L  L LS 
Sbjct: 285 IGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSE 344

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP  I ++  L  L L  N +                 YL    P+N    A   
Sbjct: 345 NKLEALPKSIKRLKKLSSLNLGNNEI-----------------YL---FPKN----ACNI 380

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           K  L             L LEG  +  +P EI +   +  L L  N ++ LPP L    +
Sbjct: 381 KNLLA------------LDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTA 428

Query: 405 LQTLILSRNKIKDWPDAI 422
           L+ L +S N+ + +P+ +
Sbjct: 429 LRRLEISDNEFETFPEVL 446



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 153/330 (46%), Gaps = 33/330 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +  +++L E+L  L  L  LN+S N+L ELP +IG+L  LK  D+S N + +
Sbjct: 129 NLQILDLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQE 188

Query: 106 IPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P+E                        G   AL     S NQL +LP+SLG+   L   
Sbjct: 189 LPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELL 248

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +  +N +  +P  +     + +LD+  N +  L    I     L  L  ++N L+ +P  
Sbjct: 249 ELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPE-IGQLQALKSLFITENELSQLPPE 307

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              L  L  L L +N+++++P +      L E  +  N L ALP  + +L KL +L+L +
Sbjct: 308 FAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGN 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N++  +   AC ++ L  LDL  N +  LP EI ++  L  L+L  N LR L        
Sbjct: 368 NEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNL-------- 419

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITM 351
            P L      R  E  D+E  T  E L  M
Sbjct: 420 PPYLQDLTALRRLEISDNEFETFPEVLYQM 449



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 67/449 (14%)

Query: 84  PAAIGELHMLKSLDV-SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           PA IG+   L+ L +    ++ ++P+EIG    L     +S  +K LP+S+G+  NL   
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              N  +  LPE+L     +  L++  N+L  L                        P +
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSANQLEEL------------------------PPS 169

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L   DL  NR+  +P+  S    L E  + NN LS LP+  G+L  L TL L  
Sbjct: 170 IGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSE 229

Query: 263 NQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL +         +L +L+L +N L  +P +IG++ +L +L L+ N ++ L       P
Sbjct: 230 NQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQL------PP 283

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               L+ L+S                       L +T  EL       S +P E  +   
Sbjct: 284 EIGQLQALKS-----------------------LFITENEL-------SQLPPEFAQLKN 313

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L L  N +  LP      + L+ L LS NK++  P +I   L  LS L L NN +  
Sbjct: 314 LQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSI-KRLKKLSSLNLGNNEIYL 372

Query: 442 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
            P +   +I  L  LDL  N I  LPE    S L +L+ L L   +LR  P  +  L  L
Sbjct: 373 FPKNAC-NIKNLLALDLEGNYIEELPEE--ISQLQNLEFLILYDNELRNLPPYLQDLTAL 429

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLS 529
           R L++S N  ++ PE    +  L +L L+
Sbjct: 430 RRLEISDNEFETFPEVLYQMRQLNDLILN 458



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 38/300 (12%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           +LS+  L+++PNE             + +   L++L LA+N +  L  +   L  L  L 
Sbjct: 180 DLSSNRLQELPNE-------------FSQLTQLEELALANNLLSFLPSNFGQLQALKTLQ 226

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S N+L +LPA++G+L  L+ L++  N + +IP +IG   +LV+ D S N +++LP  +G
Sbjct: 227 LSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIG 286

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +   L     + N ++ LP + A    + +L ++ NKL  L                   
Sbjct: 287 QLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIAL------------------- 327

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P   G LS+L  L L +N++ ++P SI     L+   +GNN +   P     +  
Sbjct: 328 -----PINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEIYLFPKNACNIKN 382

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  N ++E   E  QL+ L  L L +N L  LPP +  +T LR+L ++ N   T 
Sbjct: 383 LLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTALRRLEISDNEFETF 442



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 63/343 (18%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG L  L  L L+   I  +P+SI    +L    +GN  L  LP ELG+L  L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNL 153

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L +NQL+E      QL+ L + DLS+N L  LP E  ++T L +L L  N L  L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLP 213

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S+   G   AL           +  + S  + D +  +       + L L+  +L  IP+
Sbjct: 214 SNF--GQLQAL-----------KTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPA 260

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           +I +   + +LDLS N IQ+LPPE+                          L +L  L +
Sbjct: 261 QIGQLQSLVELDLSDNFIQQLPPEIGQ------------------------LQALKSLFI 296

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
             N L Q+P                         P F+ L +LQEL L+  +L   P + 
Sbjct: 297 TENELSQLP-------------------------PEFAQLKNLQELQLQENKLIALPINF 331

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +L QL  L LS+N L+++P+  K L  L+ L+L +N I   P
Sbjct: 332 GKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEIYLFP 374



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 166/380 (43%), Gaps = 47/380 (12%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  LI +   +  +P +IG L  L  LDL   ++  +P  +    +L    +  
Sbjct: 101 IGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNLEALNLSA 160

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP  +G+L  L   DL SN+L+E   E  QL +L  L L+NN LS LP   G++ 
Sbjct: 161 NQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQ 220

Query: 299 TLRKLLLTGNPLRTLRSSLVN--------------GPTPALLKYLRSRLPENEDSEASTT 344
            L+ L L+ N L  L +SL                G  PA +  L+S +           
Sbjct: 221 ALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLV----------- 269

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                           EL L    +  +P EI +   +  L ++ N + +LPPE +   +
Sbjct: 270 ----------------ELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKN 313

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           LQ L L  NK+   P      LS L  L+L  N L  +P    K +  L  L+L  N I 
Sbjct: 314 LQELQLQENKLIALPINF-GKLSQLEELQLSENKLEALPK-SIKRLKKLSSLNLGNNEIY 371

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
             P+N    ++ +L  L L    + E P +I +LQ L  L L  N L+++P   ++LT+L
Sbjct: 372 LFPKNA--CNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTAL 429

Query: 524 TELDLSDNNISALPPELVSV 543
             L++SDN     P  L  +
Sbjct: 430 RRLEISDNEFETFPEVLYQM 449


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 195/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L            E +        
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSL------------EQVPKEIFNFE 45

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
            T +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 46  KTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|356527419|ref|XP_003532308.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RCH1-like [Glycine max]
          Length = 1127

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 247/536 (46%), Gaps = 72/536 (13%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           LQ+L+++  N+   +  D+ N P L VL++S N L   +P++IG L  L++L ++ N + 
Sbjct: 104 LQRLVISGANLTGAISPDIGNCPELIVLDLSSNSLVGGIPSSIGRLKYLQNLSLNSNHLT 163

Query: 105 K-IPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNN--CITSLPEDLADCS 160
             IP EIG    L   D   N L   LP  LG+  NL   +A  N   +  +P++L DC 
Sbjct: 164 GPIPSEIGDCVNLKTLDIFDNNLSGGLPVELGKLTNLEVIRAGGNSGIVGKIPDELGDCR 223

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +S L +   K++                         +P ++G LS L  L ++   + 
Sbjct: 224 NLSVLGLADTKIS-----------------------GSLPASLGKLSMLQTLSIYSTMLS 260

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA---CQL 275
             IP  I  C  L   ++  N LS  LP E+GKL KL  + L  N       E    C+ 
Sbjct: 261 GEIPPEIGNCSELVNLFLYENGLSGFLPREIGKLQKLEKMLLWQNSFGGGIPEEIGNCR- 319

Query: 276 RLSVLDLSNNSLS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L +LD+S NSLS G+P  +G+++ L +L+L+ N         ++G  P  L  L +   
Sbjct: 320 SLKILDVSLNSLSGGIPQSLGQLSNLEELMLSNNN--------ISGSIPKALSNLTNLIQ 371

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELS------------LEGMNLS------AI 372
            +L  N+ S +   +   +T  T       +L             LE ++LS      ++
Sbjct: 372 LQLDTNQLSGSIPPELGSLTKLTVFFAWQNKLEGGIPSTLGGCKCLEALDLSYNALTDSL 431

Query: 373 PSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           P  +++   +TKL L  N I   +PPE+ +C+SL  L L  N+I       +  L+SL+ 
Sbjct: 432 PPGLFKLQNLTKLLLISNDISGPIPPEIGNCSSLIRLRLVDNRISGEIPKEIGFLNSLNF 491

Query: 432 LKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-E 489
           L L  N L   VP +   +   LQ+L+LS N  S       SSL  L+ L +   +   E
Sbjct: 492 LDLSENHLTGSVPLE-IGNCKELQMLNLSNNSLSGALPSYLSSLTRLEVLDVSMNKFSGE 550

Query: 490 APTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELVSV 543
            P  I +L  L  + LS+NS    IP      + L  LDLS NN S  +PPEL+ +
Sbjct: 551 VPMSIGQLISLLRVILSKNSFSGPIPSSLGQCSGLQLLDLSSNNFSGSIPPELLQI 606



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 233/502 (46%), Gaps = 59/502 (11%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM--KIPDEIGSA 113
           + K+ ++L +   L+VL ++  K+S  LPA++G+L ML++L + +++++  +IP EIG+ 
Sbjct: 212 VGKIPDELGDCRNLSVLGLADTKISGSLPASLGKLSMLQTLSI-YSTMLSGEIPPEIGNC 270

Query: 114 TALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNK 171
           + LV      N L   LP  +G+   L       N     +PE++ +C  +  LDV  N 
Sbjct: 271 SELVNLFLYENGLSGFLPREIGKLQKLEKMLLWQNSFGGGIPEEIGNCRSLKILDVSLNS 330

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCC 230
           L+                        G+P+++G LS L  L L  N I  SIP ++S   
Sbjct: 331 LS-----------------------GGIPQSLGQLSNLEELMLSNNNISGSIPKALSNLT 367

Query: 231 SLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNS 286
           +L +  +  N LS  +P ELG L+KL       N+L+      +  C+  L  LDLS N+
Sbjct: 368 NLIQLQLDTNQLSGSIPPELGSLTKLTVFFAWQNKLEGGIPSTLGGCKC-LEALDLSYNA 426

Query: 287 LS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLPENEDSEA 341
           L+  LPP + K+  L KLLL  N         ++GP P  +      +R RL +N  S  
Sbjct: 427 LTDSLPPGLFKLQNLTKLLLISND--------ISGPIPPEIGNCSSLIRLRLVDNRISGE 478

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELS 400
              +   +     L ++   L+       ++P EI    E+  L+LS NS+   LP  LS
Sbjct: 479 IPKEIGFLNSLNFLDLSENHLT------GSVPLEIGNCKELQMLNLSNNSLSGALPSYLS 532

Query: 401 SCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           S   L+ L +S NK   + P +I   +S L  +   N+    +PS        LQ+LDLS
Sbjct: 533 SLTRLEVLDVSMNKFSGEVPMSIGQLISLLRVILSKNSFSGPIPSS-LGQCSGLQLLDLS 591

Query: 460 YNIASLPENPPFSSLPHLQ-ELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGF 517
            N  S    P    +  L   L L    L    P +I  L +L +LDLS N+L+     F
Sbjct: 592 SNNFSGSIPPELLQIGALDISLNLSHNALSGVVPPEISSLNKLSVLDLSHNNLEGDLMAF 651

Query: 518 KNLTSLTELDLSDNNISALPPE 539
             L +L  L++S N  +   P+
Sbjct: 652 SGLENLVSLNISYNKFTGYLPD 673



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 184/400 (46%), Gaps = 45/400 (11%)

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLLNGMPETIGSLSRLI 210
            P  ++    + +L + G  LT   +  I +   L  L ++S +L+ G+P +IG L  L 
Sbjct: 94  FPSKISSFPFLQRLVISGANLTGAISPDIGNCPELIVLDLSSNSLVGGIPSSIGRLKYLQ 153

Query: 211 RLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQ--LK 266
            L L+ N +   IPS I  C +L    + +N LS  LP ELGKL+ L  +    N   + 
Sbjct: 154 NLSLNSNHLTGPIPSEIGDCVNLKTLDIFDNNLSGGLPVELGKLTNLEVIRAGGNSGIVG 213

Query: 267 EYCVEACQLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +   E    R LSVL L++  +SG LP  +GK++ L+ L        ++ S++++G  P 
Sbjct: 214 KIPDELGDCRNLSVLGLADTKISGSLPASLGKLSMLQTL--------SIYSTMLSGEIP- 264

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                    PE            +   +  +++   E  L G     +P EI +  ++ K
Sbjct: 265 ---------PE------------IGNCSELVNLFLYENGLSGF----LPREIGKLQKLEK 299

Query: 385 LDLSRNSI-QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           + L +NS    +P E+ +C SL+ L +S N +       L  LS+L  L L NN +    
Sbjct: 300 MLLWQNSFGGGIPEEIGNCRSLKILDVSLNSLSGGIPQSLGQLSNLEELMLSNNNISGSI 359

Query: 444 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRI 502
                ++  L  L L  N  S    P   SL  L   +  + +L    P+ +   + L  
Sbjct: 360 PKALSNLTNLIQLQLDTNQLSGSIPPELGSLTKLTVFFAWQNKLEGGIPSTLGGCKCLEA 419

Query: 503 LDLSQNSL-QSIPEGFKNLTSLTELDLSDNNISA-LPPEL 540
           LDLS N+L  S+P G   L +LT+L L  N+IS  +PPE+
Sbjct: 420 LDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEI 459


>gi|328773976|gb|EGF84013.1| hypothetical protein BATDEDRAFT_21667 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 485

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 188/405 (46%), Gaps = 111/405 (27%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI------------------ 87
           +LQ+L ++HN IE+L  ++ +L  L  L + HN L+ +PA +                  
Sbjct: 103 NLQRLDISHNQIEELPIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITE 162

Query: 88  -----GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                G L +LK+L+VS N ++ +  EIG+ T+LV  + +SNQ+  LP  LG  L+L +F
Sbjct: 163 IDNQFGMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEF 222

Query: 143 KASNN-CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL-LNGMP 200
              +N  + ++P  +++ + + K+++   KL+   + + A+W  +T+ +  +N  +  +P
Sbjct: 223 YIQDNRFLANIPSTMSNLTMLKKVNLGNLKLSTYPSAM-ATWANMTDFVVRQNANITEIP 281

Query: 201 ETIGSLS-----------------------RLIRLDLHQNRI--LSIPSSISGCCSLAEF 235
           +TIG L+                        L RLDL +N++   +IP +I+   S+   
Sbjct: 282 DTIGKLTGLKTLESQNCSIRILADDIGQLRNLTRLDLRKNQLSSFAIPYTITDWKSITHL 341

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
            +GNN+   +P E+                       CQL  L  LD S N L GLP +I
Sbjct: 342 QLGNNSFEIIPEEI-----------------------CQLYSLIDLDFSYNMLVGLPKQI 378

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           GK+T L KL L  N + +L + +      ALLK L+                   T+  R
Sbjct: 379 GKLTQLVKLCLNNNKIESLTTEI------ALLKSLQ-------------------TLEIR 413

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            +            LS +P EI E   + KLD+S N + +LPPEL
Sbjct: 414 FNA-----------LSRLPPEIGELSSLLKLDISENQLVDLPPEL 447



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 36/449 (8%)

Query: 116 LVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           L + + S+ QL E+ P+ L    +L    A  N +  +P D+   SK+  LD+ GN +  
Sbjct: 11  LSELNISNQQLLEIKPAMLKIHPDLVKLSAHKNQLVDIPSDIVLLSKLQILDISGNNINN 70

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPET--IGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             +NL  S T++    AS N L   P T  IG L  L RLD+  N+I  +P  ++    L
Sbjct: 71  FPHNLPPSITIIN---ASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVADLSRL 127

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLP 291
               + +N L+A+PA + KLS L  L+L  N++ E   +   L L   L++SNN L  + 
Sbjct: 128 KTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITEIDNQFGMLSLLKNLNVSNNLLVNVS 187

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
            EIG +T+L  L L  N +  L   L N  +        +R   N  S  S      +TM
Sbjct: 188 AEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEFYIQDNRFLANIPSTMSN-----LTM 242

Query: 352 ATRLSVTSKELSL-----------------EGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
             ++++ + +LS                  +  N++ IP  I +   +  L+    SI+ 
Sbjct: 243 LKKVNLGNLKLSTYPSAMATWANMTDFVVRQNANITEIPDTIGKLTGLKTLESQNCSIRI 302

Query: 395 LPPELSSCASLQTLILSRNKIKDW--PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
           L  ++    +L  L L +N++  +  P  I T   S++ L+L NN    +P +  +   +
Sbjct: 303 LADDIGQLRNLTRLDLRKNQLSSFAIPYTI-TDWKSITHLQLGNNSFEIIPEEICQLYSL 361

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +  LD SYN +  LP+      L  L +L L   ++    T+I  L+ L+ L++  N+L 
Sbjct: 362 ID-LDFSYNMLVGLPKQ--IGKLTQLVKLCLNNNKIESLTTEIALLKSLQTLEIRFNALS 418

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +P     L+SL +LD+S+N +  LPPEL
Sbjct: 419 RLPPEIGELSSLLKLDISENQLVDLPPEL 447



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 210/498 (42%), Gaps = 94/498 (18%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD------------------- 108
           P L  L+   N+L ++P+ I  L  L+ LD+S N+I   P                    
Sbjct: 33  PDLVKLSAHKNQLVDIPSDIVLLSKLQILDISGNNINNFPHNLPPSITIINASHNKLFIS 92

Query: 109 ----EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
               +IG    L + D S NQ++ELP  +     L   +  +N +T++P  +   S + K
Sbjct: 93  PLTPKIGMLKNLQRLDISHNQIEELPIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEK 152

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++T + N      ++L  L  S NLL  +   IG+L+ L+ L+L  N+I  +P 
Sbjct: 153 LNLSFNRITEIDNQF-GMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPD 211

Query: 225 SISGCCSLAEFYMGNN-ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL- 282
            +    SL EFY+ +N  L+ +P+ +  L+ L  ++L + +L  Y   A     ++ D  
Sbjct: 212 ELGNLLSLEEFYIQDNRFLANIPSTMSNLTMLKKVNLGNLKLSTYP-SAMATWANMTDFV 270

Query: 283 --SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
              N +++ +P  IGK+T L+ L                               E+++  
Sbjct: 271 VRQNANITEIPDTIGKLTGLKTL-------------------------------ESQNCS 299

Query: 341 ASTTKEDLITMA--TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                +D+  +   TRL +   +LS       AIP  I +   IT L L  NS + +P E
Sbjct: 300 IRILADDIGQLRNLTRLDLRKNQLS-----SFAIPYTITDWKSITHLQLGNNSFEIIPEE 354

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
           +    SL  L  S N +   P  I   L+ L  L L+NN +  + ++             
Sbjct: 355 ICQLYSLIDLDFSYNMLVGLPKQI-GKLTQLVKLCLNNNKIESLTTE------------- 400

Query: 459 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
                        + L  LQ L +R   L   P +I  L  L  LD+S+N L  +P    
Sbjct: 401 ------------IALLKSLQTLEIRFNALSRLPPEIGELSSLLKLDISENQLVDLPPELY 448

Query: 519 NLTSLTELDLSDNNISAL 536
            L  +T L+L  N+  A+
Sbjct: 449 LLEGVT-LELKGNHFDAV 465



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 9/222 (4%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS-IMKIPDEIGSATALVKFDCS 122
           + NL +L  +N+ + KLS  P+A+     +    V  N+ I +IPD IG  T L   +  
Sbjct: 237 MSNLTMLKKVNLGNLKLSTYPSAMATWANMTDFVVRQNANITEIPDTIGKLTGLKTLESQ 296

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITS--LPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           +  ++ L   +G+  NL+      N ++S  +P  + D   ++ L +  N   ++   + 
Sbjct: 297 NCSIRILADDIGQLRNLTRLDLRKNQLSSFAIPYTITDWKSITHLQLGNNSFEIIPEEIC 356

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
             ++++ +L  S N+L G+P+ IG L++L++L L+ N+I S+ + I+   SL    +  N
Sbjct: 357 QLYSLI-DLDFSYNMLVGLPKQIGKLTQLVKLCLNNNKIESLTTEIALLKSLQTLEIRFN 415

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKE-----YCVEACQLRL 277
           ALS LP E+G+LS L  LD+  NQL +     Y +E   L L
Sbjct: 416 ALSRLPPEIGELSSLLKLDISENQLVDLPPELYLLEGVTLEL 457



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 9/205 (4%)

Query: 342 STTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--IQELPP 397
           S  K  L+ + + + + SK   L + G N++  P  +  +  IT ++ S N   I  L P
Sbjct: 39  SAHKNQLVDIPSDIVLLSKLQILDISGNNINNFPHNLPPS--ITIINASHNKLFISPLTP 96

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           ++    +LQ L +S N+I++ P  +   LS L  L+L +N L  +P+ G   +  L+ L+
Sbjct: 97  KIGMLKNLQRLDISHNQIEELPIEV-ADLSRLKTLELHHNMLTAIPA-GVLKLSGLEKLN 154

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
           LS+N  +  +N  F  L  L+ L +    L     +I  L  L  L+L+ N +  +P+  
Sbjct: 155 LSFNRITEIDNQ-FGMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPDEL 213

Query: 518 KNLTSLTELDLSDNNISALPPELVS 542
            NL SL E  + DN   A  P  +S
Sbjct: 214 GNLLSLEEFYIQDNRFLANIPSTMS 238



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 8/190 (4%)

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           S+T    S   + +S +  +I     + +LD+S N I+ELP E++  + L+TL L  N +
Sbjct: 78  SITIINASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVADLSRLKTLELHHNML 137

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
              P  +L  LS L  L L  N + ++  + F  + +L+ L++S N+  +  +    +L 
Sbjct: 138 TAIPAGVL-KLSGLEKLNLSFNRITEI-DNQFGMLSLLKNLNVSNNLL-VNVSAEIGTLT 194

Query: 476 HLQELYLRRMQLREAPTDI---LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  L L   Q+   P ++   L L++  I D     L +IP    NLT L +++L +  
Sbjct: 195 SLVYLNLASNQITMLPDELGNLLSLEEFYIQD--NRFLANIPSTMSNLTMLKKVNLGNLK 252

Query: 533 ISALPPELVS 542
           +S  P  + +
Sbjct: 253 LSTYPSAMAT 262


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 20/302 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L + +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPQTITQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL +  I     L +L  ++
Sbjct: 195 GMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDE-IGDLEKLDDLTVAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  +  LS +++ D  +N I  +  +I  C +L E Y+  N L+ +P+ LG L 
Sbjct: 254 NCLQVLPRRLKKLS-ILKAD--RNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLK 310

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L +  N L 
Sbjct: 311 SLRTLNLDKNQLKELPPTIGGCT-SLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLN 369

Query: 312 TL 313
            L
Sbjct: 370 YL 371



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 189/398 (47%), Gaps = 36/398 (9%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N++
Sbjct: 25  LQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  +++
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +P
Sbjct: 133 SLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPS-ISELNQLRRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L +
Sbjct: 192 NEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTV 251

Query: 261 HSNQLKEYCVEACQLR---LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N     C++    R   LS+L    N+++ L P IG    L ++ LT N L  + SSL
Sbjct: 252 AQN-----CLQVLPRRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSL 306

Query: 318 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
            N      LK LR+  L +N+  E   T    I   T LSV    LSL    +  +P EI
Sbjct: 307 GN------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIEQLPLEI 352

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                +  LD+  N +  LP  ++    L+ L LS N+
Sbjct: 353 GRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 390



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 170/384 (44%), Gaps = 49/384 (12%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISE-----LNQLRRLDLGHNE-- 186

Query: 340 EASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                 +DL   I M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP
Sbjct: 187 -----LDDLPNEIGMLENL----EELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLP 237

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+     L  L +++N ++  P      L  LS LK D N + Q+              
Sbjct: 238 DEIGDLEKLDDLTVAQNCLQVLP----RRLKKLSILKADRNAITQL-------------- 279

Query: 457 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
                       P   S   L E+YL    L E P+ +  L+ LR L+L +N L+ +P  
Sbjct: 280 -----------TPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPT 328

Query: 517 FKNLTSLTELDLSDNNISALPPEL 540
               TSL+ L L DN I  LP E+
Sbjct: 329 IGGCTSLSVLSLRDNLIEQLPLEI 352



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K LSL    +  +PS+I     + +L+L  N + +LP E+ +C  L+ L LS N I   P
Sbjct: 63  KILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLP 122

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I T L+S++ L L++  L Q+P D                            L +L+ 
Sbjct: 123 QTI-TQLTSMTSLGLNDISLTQMPHD-------------------------IGHLRNLRS 156

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L +R   LR  P  I  L QLR LDL  N L  +P     L +L EL +  N++ ALP  
Sbjct: 157 LEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPES 216

Query: 540 LV 541
           +V
Sbjct: 217 IV 218


>gi|449678559|ref|XP_002158634.2| PREDICTED: leucine-rich repeat protein soc-2 homolog [Hydra
           magnipapillata]
          Length = 499

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 211/443 (47%), Gaps = 42/443 (9%)

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L +     N++ +LP  +G  +NL     + N I+SLP ++ +C K+  LD+  NK+ 
Sbjct: 36  TGLTQLFLYGNKISKLPPEIGLLVNLETLLLNENSISSLPAEIVNCKKLQMLDLRHNKIK 95

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +   ++ S   L +L+   N L  +   IG+L+ L  L L +NR+  IP +I    SL 
Sbjct: 96  EIP-PVLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPDTIGNLKSLV 154

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
              +  N L +LP E+GK                 C+E     ++ LDL++N L  LP  
Sbjct: 155 TLDLAKNHLESLPPEIGK-----------------CIE-----MNTLDLAHNELRDLPDS 192

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLV------------NGPTPALLKYLRSRLPENEDSEA 341
           IGK+T L +L L  N L +L SS+             NG +      L S    +  + +
Sbjct: 193 IGKLTALSRLGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLS 252

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 400
               E+  +   +   +   L  +   +  IP  I+ +A  +TKL+L  N I ELP +  
Sbjct: 253 RNEFENFPSDGPKQFASVTSLVFDHNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFG 312

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
           + A+L  L L  N++   PD I   L +L  L L NN L+++P     ++  L++LDL  
Sbjct: 313 TWANLDELNLGTNQLTVLPDDI-KWLVNLEVLILSNNQLKRIPR-SIGNLRKLRVLDLDE 370

Query: 461 -NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
            N+  LP    +  L  L++L L+  +L   P  I  L++L  L + +N L  +P     
Sbjct: 371 NNLECLPNEIEY--LKSLEKLLLQSNKLTTLPATIGHLKKLSYLSVGENDLTVLPPEIGA 428

Query: 520 LTSLTELDLSDN-NISALPPELV 541
           L SL +L L+DN N+ ALP  LV
Sbjct: 429 LESLEQLFLNDNKNLHALPHTLV 451



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 193/445 (43%), Gaps = 85/445 (19%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +  V L++L+L  N +  ++ ++ NL  LT+L++  N+L  +P  IG L  L +LD++ N
Sbjct: 102 YSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPDTIGNLKSLVTLDLAKN 161

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG    +   D + N+L++LP S+G+   LS      N +TSLP  +  C+ 
Sbjct: 162 HLESLPPEIGKCIEMNTLDLAHNELRDLPDSIGKLTALSRLGLRYNQLTSLPSSICQCTL 221

Query: 162 MSKLDVEGNKL----------------TVLSNNLIAS--------WTMLTELIASKNLLN 197
           + ++++E N +                  LS N   +        +  +T L+   N + 
Sbjct: 222 LQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPSDGPKQFASVTSLVFDHNKIK 281

Query: 198 GMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
            +P  I S ++ L +L+L  N I  +P       +L E  +G N L+ LP ++  L  L 
Sbjct: 282 KIPFGIFSKAQFLTKLNLKDNLIAELPLDFGTWANLDELNLGTNQLTVLPDDIKWLVNLE 341

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L +NQLK        LR L VLDL  N+L  LP EI  + +L KLLL  N L TL  
Sbjct: 342 VLILSNNQLKRIPRSIGNLRKLRVLDLDENNLECLPNEIEYLKSLEKLLLQSNKLTTL-- 399

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  PA + +L+                                             
Sbjct: 400 -------PATIGHLK--------------------------------------------- 407

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
                +++ L +  N +  LPPE+ +  SL+ L L+ NK        L    +L+ + +D
Sbjct: 408 -----KLSYLSVGENDLTVLPPEIGALESLEQLFLNDNKNLHALPHTLVLCQNLTIMNID 462

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSY 460
             PL  +P +   + P + I  L +
Sbjct: 463 ACPLSSLPQEIVANGPSVVIQYLRF 487



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 96/386 (24%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L+   L  +P E+ K              +++  L LAHN +  L + +  L  L+ 
Sbjct: 155 TLDLAKNHLESLPPEIGK-------------CIEMNTLDLAHNELRDLPDSIGKLTALSR 201

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-------------------------- 106
           L + +N+L+ LP++I +  +L+ +++  N I  +                          
Sbjct: 202 LGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPS 261

Query: 107 --PDEIGSATALVKFDCSSNQLKELPSSL-GRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             P +  S T+LV FD   N++K++P  +  +   L+     +N I  LP D    + + 
Sbjct: 262 DGPKQFASVTSLV-FD--HNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFGTWANLD 318

Query: 164 KLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +L++  N+LTVL +++   W + L  LI S N L  +P +IG+L +L  LDL +N +  +
Sbjct: 319 ELNLGTNQLTVLPDDI--KWLVNLEVLILSNNQLKRIPRSIGNLRKLRVLDLDENNLECL 376

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P+ I    SL +  + +N L+ LPA +G L KL                      S L +
Sbjct: 377 PNEIEYLKSLEKLLLQSNKLTTLPATIGHLKKL----------------------SYLSV 414

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGN------------------------PLRTLRSSLV 318
             N L+ LPPEIG + +L +L L  N                        PL +L   +V
Sbjct: 415 GENDLTVLPPEIGALESLEQLFLNDNKNLHALPHTLVLCQNLTIMNIDACPLSSLPQEIV 474

Query: 319 -NGPTPALLKYLRSRLPENEDSEAST 343
            NGP+  +++YLR   P N ++   T
Sbjct: 475 ANGPS-VVIQYLRFEGPYNGNNTLPT 499


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 151/308 (49%), Gaps = 27/308 (8%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV-------------- 75
           KN D     D+  + V LQ+L L++NNIE L + +R L  L  L++              
Sbjct: 74  KNLDRLP--DEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQ 131

Query: 76  ---------SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                     +N L++LP ++G L  LK L+V  N + ++P  IG  T+L+K + S NQL
Sbjct: 132 LTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQL 191

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            EL       +NL      +N ++ LP  +   + + KL + GN + VL  N I   T L
Sbjct: 192 SELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPAN-IEQLTSL 250

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L    N L  +P TI  L  L  L L  N +  +P  I     L +  +  N L  LP
Sbjct: 251 KHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELP 310

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           AE+G+L++L  L+L  N L +   E  QL  L  L +  N L+ +PP +G++T L++ +L
Sbjct: 311 AEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFML 370

Query: 306 TGNPLRTL 313
           + N L +L
Sbjct: 371 SNNQLTSL 378



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 139/262 (53%), Gaps = 23/262 (8%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++N + +L +   NL  L  LN+ HN+LS+LP AIG+L  L+ L +S N++  +P 
Sbjct: 183 KLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPA 242

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            I   T+L       N L++LP ++ +  +L++     N +  LP ++     + KL++ 
Sbjct: 243 NIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELS 302

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  L    I   T L +L   +NLL  +P  IG L+ L  L ++QN++ +IP ++  
Sbjct: 303 YNELKELPAE-IGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQ 361

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L  F + NN L++LP E+G LS                       LS L L NN L+
Sbjct: 362 LTALQRFMLSNNQLTSLPIEIGHLS----------------------HLSTLSLENNQLA 399

Query: 289 GLPPEIGKMTTLRKLLLTGNPL 310
            LP EI +++ L+ L LTGNP+
Sbjct: 400 TLPLEIKQLSKLKSLQLTGNPM 421



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 183/403 (45%), Gaps = 41/403 (10%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+     L+  D S   L  LP  + + + L     SNN I  L + +    ++ KLD++
Sbjct: 59  EVLYCQTLIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQ 118

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           GN+L  L   ++   T L ELI   N L  +P ++G+L++L  L++H N +  +PS+I  
Sbjct: 119 GNELAQLPP-IVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGK 177

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             SL +  +  N LS L      L  L  L+L  NQL +  +   QL  L  L LS N++
Sbjct: 178 LTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNM 237

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + LP  I ++T+L+ L L GN L  L       PT   LK L     +    +    +  
Sbjct: 238 NVLPANIEQLTSLKHLSLGGNTLEQL------PPTICKLKSLTELFLDYNYLQQLPIEIK 291

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
            +    +L ++  EL         +P+EI +  ++ +L+L +N + +LPPE+     L+ 
Sbjct: 292 YLKHLQKLELSYNELK-------ELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLEN 344

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           L + +NK+ + P  +   L++L    L NN L  +P +                      
Sbjct: 345 LWVYQNKLTNIPPTV-GQLTALQRFMLSNNQLTSLPIE---------------------- 381

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
                 L HL  L L   QL   P +I +L +L+ L L+ N +
Sbjct: 382 ---IGHLSHLSTLSLENNQLATLPLEIKQLSKLKSLQLTGNPM 421



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 48/397 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L   ++S   L  LP  + +L  L+ LD+S N+I  +  +I     L K D   N+L +L
Sbjct: 66  LIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQL 125

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +   L +     N +T LP  + + +++  L+V  N L  L              
Sbjct: 126 PPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRL-------------- 171

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P TIG L+ LI+L+L  N++  +        +L +  + +N LS LP  +
Sbjct: 172 ----------PSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAI 221

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L+ L  L L  N +        QL  L  L L  N+L  LPP I K+ +L +L L  N
Sbjct: 222 GQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYN 281

Query: 309 PLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
            L+ L         P  +KYL+      L  NE  E        I   T+L    K+L+L
Sbjct: 282 YLQQL---------PIEIKYLKHLQKLELSYNELKELPAE----IGQLTQL----KQLNL 324

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L+ +P EI +   +  L + +N +  +PP +    +LQ  +LS N++   P  I  
Sbjct: 325 GQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEI-G 383

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            LS LS L L+NN L  +P +  K +  L+ L L+ N
Sbjct: 384 HLSHLSTLSLENNQLATLPLE-IKQLSKLKSLQLTGN 419



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 40/362 (11%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +     L +L  S N +  + + I  L +L +LDL  N +  +P  +     L E  +G 
Sbjct: 83  VTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELILGY 142

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N L+ LP  +G L++L  L++H                      NN L  LP  IGK+T+
Sbjct: 143 NYLTQLPGSVGNLTQLKVLEVH----------------------NNDLFRLPSTIGKLTS 180

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L KL L+ N L  L        T  L+   +  L  N+ S+        + MA       
Sbjct: 181 LIKLNLSYNQLSELSKM-----TENLVNLQQLNLQHNQLSQ--------LPMAIGQLTAL 227

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L G N++ +P+ I +   +  L L  N++++LPP +    SL  L L  N ++  P
Sbjct: 228 QKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLP 287

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQ 478
             I   L  L  L+L  N L+++P++    +  L+ L+L  N+   LP  P    L  L+
Sbjct: 288 IEI-KYLKHLQKLELSYNELKELPAE-IGQLTQLKQLNLGQNLLTKLP--PEIGQLNCLE 343

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L++ + +L   P  + +L  L+   LS N L S+P    +L+ L+ L L +N ++ LP 
Sbjct: 344 NLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPL 403

Query: 539 EL 540
           E+
Sbjct: 404 EI 405



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 75/129 (58%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L +N +++L  +++ L  L  L +S+N+L ELPA IG+L  LK L++  N + K+
Sbjct: 273 LTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKL 332

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L       N+L  +P ++G+   L  F  SNN +TSLP ++   S +S L 
Sbjct: 333 PPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLS 392

Query: 167 VEGNKLTVL 175
           +E N+L  L
Sbjct: 393 LENNQLATL 401



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 73/125 (58%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            LQKL L++N +++L  ++  L  L  LN+  N L++LP  IG+L+ L++L V  N +  
Sbjct: 295 HLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTN 354

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  +G  TAL +F  S+NQL  LP  +G   +LS     NN + +LP ++   SK+  L
Sbjct: 355 IPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPLEIKQLSKLKSL 414

Query: 166 DVEGN 170
            + GN
Sbjct: 415 QLTGN 419


>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 315

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L   +  NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 120/266 (45%), Gaps = 15/266 (5%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T          P  +  L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF---------PEEITQL 213

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +     +      TT    I     L    K L L G  L+ +P EI +   +  L LS 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNL----KALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQTLILSRNKI 415
           N +  LP E+    +LQTLIL  N I
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L+L    L+ +P EI +   + +L LS N    LP E+    +LQ L L+ N++   P
Sbjct: 79  QKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLP 138

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + I      L  L+LDNN L  +P +    +  L++L LS N + +LPE    + L  LQ
Sbjct: 139 EEI-AQFQKLQWLRLDNNQLANLPQE-ITQLQNLELLFLSGNRLTTLPEE--IAQLRSLQ 194

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LY+   +    P +I +LQ+L+ LDL  N L ++P+    L +L  L L  N ++ LP 
Sbjct: 195 RLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPE 254

Query: 539 ELVSV 543
           E+  +
Sbjct: 255 EITQL 259



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 114/262 (43%), Gaps = 41/262 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDL+   L+ L  EIGK+  L+KL L  N L TL         P  +  LR+        
Sbjct: 58  LDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTL---------PEEIAQLRN-------- 100

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               + L L     + +P EIW+   +  LDL+ N +  LP E+
Sbjct: 101 -------------------LQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEI 141

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +    LQ L L  N++ + P  I T L +L  L L  N L  +P +    +  LQ L + 
Sbjct: 142 AQFQKLQWLRLDNNQLANLPQEI-TQLQNLELLFLSGNRLTTLPEE-IAQLRSLQRLYVY 199

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N   + PE    + L  LQ L L   QL   P +I RLQ L+ L L  N L  +PE   
Sbjct: 200 GNRFTTFPEE--ITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEIT 257

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L +L  L LS N ++ LP E+
Sbjct: 258 QLQNLQTLILSGNQLTTLPKEI 279



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           LQ L+L  N + +LPE    + L +LQ L L   Q    P +I +LQ L+ LDL+ N L 
Sbjct: 78  LQKLNLGSNRLTTLPEE--IAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLT 135

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           ++PE       L  L L +N ++ LP E+  +
Sbjct: 136 TLPEEIAQFQKLQWLRLDNNQLANLPQEITQL 167


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 155/314 (49%), Gaps = 15/314 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + R L+ A+ +G L LS+  L +VP  + K  D            +L  + L++N +  +
Sbjct: 6   LQRQLEQAKQTGELYLSDEDLTNVPLALAK-LD------------NLTLISLSNNQLTSV 52

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  LT L++S+N+L+ LP  + +L  L  L +S N    IP E+     L + D
Sbjct: 53  PPELAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELD 112

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           C SNQL  +P  L    NL+     +N +TS+P +LA    + +L +  N+LT +   L 
Sbjct: 113 CHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQEL- 171

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           A    LT L  S N L G+P  +  L  L  L L  N++ S+P  ++   +L E Y+ +N
Sbjct: 172 AQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSN 231

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L  +P EL  L  L  L L  NQL     E  QL+ L  L LS N L+ LPPE  ++  
Sbjct: 232 KLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKN 291

Query: 300 LRKLLLTGNPLRTL 313
           L  L L  N L  L
Sbjct: 292 LTWLYLRSNQLANL 305



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 150/313 (47%), Gaps = 42/313 (13%)

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
            E Y+ +  L+ +P  L KL  L  + L +NQL     E  QLR L+ LDLSNN L+ LP
Sbjct: 17  GELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLP 76

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
           PE+ ++  L  L L+ N    +         P  L +L                      
Sbjct: 77  PELAQLKNLTLLYLSNNQFTNI---------PLELTHL---------------------- 105

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
                V  +EL      L+++P E+     + KLDL  N +  +PPEL+   +L+ L LS
Sbjct: 106 -----VNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLS 160

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 470
            N++   P   L  L +L+ L L  N L  VP      +  L++L L  N + SLP  P 
Sbjct: 161 ANQLTHIPQE-LAQLRNLTLLSLSANQLTGVPP-ALAHLENLEVLSLRTNQLTSLP--PE 216

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
            + L +L+ELYLR  +L   P ++  L+ L +L LS N L S+P  F  L +L EL LS 
Sbjct: 217 LAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSG 276

Query: 531 NNISALPPELVSV 543
           N +++LPPE   +
Sbjct: 277 NQLTSLPPEFAQL 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 171/357 (47%), Gaps = 42/357 (11%)

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S   L  +P  +  L  L  + L  N++ S+P  ++    L    + NN L++LP 
Sbjct: 18  ELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPP 77

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           EL +L  L  L L +NQ     +E   L  L  LD  +N L+ +PPE+  +  L KL L 
Sbjct: 78  ELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLR 137

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L ++         P  L +L                E+L           KEL L  
Sbjct: 138 DNQLTSV---------PPELAHL----------------ENL-----------KELYLSA 161

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ IP E+ +   +T L LS N +  +PP L+   +L+ L L  N++   P   L  L
Sbjct: 162 NQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPE-LAHL 220

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           ++L  L L +N L  VP +    +  L +L LSYN + SLP  P F+ L +L+EL+L   
Sbjct: 221 ANLRELYLRSNKLINVPPE-LAHLEHLTLLSLSYNQLTSLP--PEFAQLKNLKELHLSGN 277

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
           QL   P +  +L+ L  L L  N L ++P  F  L +LTELDL DN +S + PE+++
Sbjct: 278 QLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEILA 334



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  + ++L  L  LT+L++S N+L+ +P A+  L  L+ L +  N +  
Sbjct: 153 NLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTS 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+     L +    SN+L  +P  L    +L+    S N +TSLP + A    + +L
Sbjct: 213 LPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKEL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT L     A    LT L    N L  +P     L  L  LDL  N++ +I   
Sbjct: 273 HLSGNQLTSLPPEF-AQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPE 331

Query: 226 I 226
           I
Sbjct: 332 I 332



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N +  L  +L +L  L  L +  NKL  +P  +  L  L  L +S+N +  
Sbjct: 199 NLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTS 258

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E      L +   S NQL  LP    +  NL+     +N + +LP + A    +++L
Sbjct: 259 LPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTEL 318

Query: 166 DVEGNKLTVLSNNLIASWT 184
           D+  N+L+ +S  ++A  T
Sbjct: 319 DLRDNQLSNISPEILAQGT 337


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASW-------TM 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 210 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 269

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 330 LDANQLTTI 338



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 94  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL   P  +G+  NL     SNN +T+ P+++     + +L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 214 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 333 NQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 147/335 (43%), Gaps = 39/335 (11%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 122 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 157

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 158 IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 217

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 218 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 268

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L       IP E  +   +  L L  N +  LP E+    +
Sbjct: 269 IPKEIGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKN 324

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L+ L L  N++   P  I   L +L  L L NN L
Sbjct: 325 LKMLNLDANQLTTIPKEI-GQLQNLQTLYLRNNQL 358



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 148/352 (42%), Gaps = 84/352 (23%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N L+  P E
Sbjct: 52  LILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKE 111

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 112 IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+T+   +                            E L  +        ++L L+   
Sbjct: 150 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 173

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 174 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 232

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 233 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 267

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 319



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 14/261 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  ++   L LSN  L  +P E+              +  +LQ+L L +N ++ + +++
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEI-------------GQLQNLQELNLWNNQLKTISKEI 158

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L + +N+L+  P  IG+L  LKSL +S N +   P EIG    L +   S+N
Sbjct: 159 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL   P  +G+   L      +N +T++P ++    K+ +L+++ N+LT +    I    
Sbjct: 219 QLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE-IGQLQ 277

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  S N    +P   G L  L  L L  N++ ++P  I    +L    +  N L+ 
Sbjct: 278 NLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTT 337

Query: 245 LPAELGKLSKLGTLDLHSNQL 265
           +P E+G+L  L TL L +NQL
Sbjct: 338 IPKEIGQLQNLQTLYLRNNQL 358



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 529 SDNNISALPPEL 540
           S+N ++  P E+
Sbjct: 216 SNNQLTTFPKEI 227



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L  N +  +  ++  L  L  
Sbjct: 212 ELYLSNNQLTTFPKEI-------GKLQK------LQWLGLGDNQLTTIPNEIGKLQKLQE 258

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 259 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 318

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N +T++P+++     +  L +  N+L++
Sbjct: 319 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSI 360


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 23/266 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+ +N+ + LP  IG+L  L+ L +  N + 
Sbjct: 44  LDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLT 103

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G    L  F+ ++NQL  LP+ +G+  NL      NN +T+LP+++     +  
Sbjct: 104 TLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYD 163

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKLT L          L  L  SKNLL  +P  IG L +L+ L+L  N++ ++P 
Sbjct: 164 LSLHDNKLTTLPKE-TGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPK 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I    SL E Y+G+N L  LP E+G+L  L  L L  NQ                    
Sbjct: 223 EIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQ-------------------- 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L+ +P EIG++  LR LLL  NP+
Sbjct: 263 --LTTVPKEIGQLKKLRWLLLDANPI 286



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           K+L  +L   L++     S   +T LP+++     +  L++  N+ T L N  I     L
Sbjct: 34  KDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNE-IGQLQSL 92

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL    N L  +P+ +G L  L   +L+ N++ ++P+ I    +L    + NN L+ LP
Sbjct: 93  RELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLP 152

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L LH N+L     E  QL+ L +L+LS N L+ LP EIG++  L  L L
Sbjct: 153 KEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNL 212

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           T N L TL         P  +  L+S                            +EL L 
Sbjct: 213 TYNQLTTL---------PKEIGQLQSL---------------------------RELYLG 236

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
              L  +P EI +   + +L L  N +  +P E+     L+ L+L  N I
Sbjct: 237 DNQLKTLPKEIGQLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDANPI 286



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 36/254 (14%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK  L  +P+ IG L  L  L+L  N+  ++P+ I    SL E Y+G+N L+ LP E+G+
Sbjct: 52  SKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQ 111

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L                        L V +L+NN L+ LP EIGK+  L+ L L  N L 
Sbjct: 112 LK----------------------NLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLT 149

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +        LK L   L  +++   +  KE       R+   SK L      L+ 
Sbjct: 150 TLPKEV------GQLKNLYD-LSLHDNKLTTLPKETGQLKNLRMLNLSKNL------LTI 196

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P+EI +  ++  L+L+ N +  LP E+    SL+ L L  N++K  P  I   L +L  
Sbjct: 197 LPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEI-GQLKNLRE 255

Query: 432 LKLDNNPLRQVPSD 445
           L L +N L  VP +
Sbjct: 256 LLLRHNQLTTVPKE 269



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 129/308 (41%), Gaps = 65/308 (21%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +    L+ LP E+G+L  L TL+L +NQ                       + LP EIG+
Sbjct: 51  LSKQKLTILPKEIGQLKNLQTLNLWNNQF----------------------TTLPNEIGQ 88

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           + +LR+L L  N L TL   +        LK L+                          
Sbjct: 89  LQSLRELYLGDNQLTTLPKEV------GQLKNLQV------------------------- 117

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
                  L    L+ +P+EI +   +  LDL  N +  LP E+    +L  L L  NK+ 
Sbjct: 118 -----FELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLT 172

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             P      L +L  L L  N L  +P++    +  L  L+L+YN + +LP+      L 
Sbjct: 173 TLPKET-GQLKNLRMLNLSKNLLTILPNE-IGQLKKLLSLNLTYNQLTTLPKE--IGQLQ 228

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            L+ELYL   QL+  P +I +L+ LR L L  N L ++P+    L  L  L L  N I  
Sbjct: 229 SLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDANPI-- 286

Query: 536 LPPELVSV 543
           LP EL  +
Sbjct: 287 LPKELKRI 294



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 29/227 (12%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L+L    L+ +P EI +   +  L+L  N    LP 
Sbjct: 26  QAEEPGTYKDL-TKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPN 84

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    SL+ L L  N++   P  +   L +L   +L+NN L  +P++  K +  LQ LD
Sbjct: 85  EIGQLQSLRELYLGDNQLTTLPKEV-GQLKNLQVFELNNNQLTTLPAEIGK-LKNLQHLD 142

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-------- 508
           L  N + +LP+      L +L +L L   +L   P +  +L+ LR+L+LS+N        
Sbjct: 143 LWNNQLTTLPKE--VGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNE 200

Query: 509 ---------------SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                           L ++P+    L SL EL L DN +  LP E+
Sbjct: 201 IGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEI 247


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 135/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    ++S L
Sbjct: 212 IPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 272 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           + GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    LRL  L LS+N
Sbjct: 331 VGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTLRLKALWLSDN 390



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 199/420 (47%), Gaps = 48/420 (11%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAH 54
           +  R   S++  + SL  VP E+Y+          + ++  E  K +++ V L+KL L+ 
Sbjct: 9   RCNRHVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L++S N + E+P +I     L+  D S N + ++P+      
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQ 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L     +   L+ LP ++G   NL+  +   N +T LPE LA   ++ +LD+  N+L  
Sbjct: 129 NLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYH 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++  +P  ISG  SL +
Sbjct: 189 LPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
             +  N L  LP  +GKL                       RLS+L +  N L  L   I
Sbjct: 248 LLVSQNLLQVLPDGIGKLR----------------------RLSILKVDQNKLIQLTDSI 285

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G   +L +L+LT N L++L  S+        LK L +    N D    T+    +     
Sbjct: 286 GDCESLTELVLTENQLQSLPKSI------GKLKKLNNL---NADRNKLTSLPKEVGGCCS 336

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L+V     S+    LS IPSEI +A E+  LD++ N +  LP  L++   L+ L LS N+
Sbjct: 337 LNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTT-LRLKALWLSDNQ 391



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 183/415 (44%), Gaps = 45/415 (10%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLVKLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C +L       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L  L                 C   LSV D+S   L  LP  IG +  L  L L  N L
Sbjct: 126 ELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLELRENLL 163

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
             L  SL      A L+ L    L  NE      T   L  +        K+L L+G  L
Sbjct: 164 TYLPESL------AQLQRLEELDLGNNELYHLPETIGALFNL--------KDLWLDGNQL 209

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + IP E+     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I   L  L
Sbjct: 210 AEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGI-GKLRRL 268

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
           S LK+D N L Q+ +D   D   L  L L+ N + SLP++     L  L  L   R +L 
Sbjct: 269 SILKVDQNKLIQL-TDSIGDCESLTELVLTENQLQSLPKS--IGKLKKLNNLNADRNKLT 325

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             P ++     L +  +  N L  IP      T L  LD++ N ++ LP  L ++
Sbjct: 326 SLPKEVGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL 380


>gi|147903968|ref|NP_001088252.1| uncharacterized protein LOC495083 [Xenopus laevis]
 gi|54038577|gb|AAH84248.1| LOC495083 protein [Xenopus laevis]
          Length = 524

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 136/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L+V +N+L +LP  IG L+ LK L +  N +  
Sbjct: 152 NLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLYKLKDLWLDGNQLAD 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S+N I  LP+ +     +S L
Sbjct: 212 LPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L++  I     LTE+I ++N L  +P +IG L +L  L++ +N+++S+P+ 
Sbjct: 272 KVDQNRLMQLTD-CIGECESLTEVILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPNE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F +  N LS LP+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTSLKLKALWLSDN 390



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 198/422 (46%), Gaps = 52/422 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++ ++ SL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKTHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVQLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L++S N++ E+P +I     L+  D S N + ++P+     +
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPDLS 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L+    +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LDV  N+L  
Sbjct: 129 SLICLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYD 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG+L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ + L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTEVILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L +                                 I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSLPNE--------------------------------IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L+V      +    LS +PSEI +A E+  LD++ N +  LP  L+S   L+ L LS 
Sbjct: 335 CSLNV----FCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTS-LKLKALWLSD 389

Query: 413 NK 414
           N+
Sbjct: 390 NQ 391



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 183/414 (44%), Gaps = 43/414 (10%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVESVDKTHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFF-QLVQLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C +L       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            LS L                   + LS+ D+S   L  LP  IG ++ L  L L  N L
Sbjct: 126 DLSSL-------------------ICLSINDIS---LQVLPENIGNLSNLVSLELRENLL 163

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  SL       L +     +  NE  +   T   L  +        K+L L+G  L+
Sbjct: 164 TFLPESLAQ-----LHRLEELDVGNNELYDLPETIGSLYKL--------KDLWLDGNQLA 210

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P EI     +  LDLS N ++ LP E+S   SL  L++S N I+  PD I   L +LS
Sbjct: 211 DLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGI-GKLKNLS 269

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            LK+D N L Q+ +D   +   L  + L+ N +  LP +     L  L  L + R +L  
Sbjct: 270 ILKVDQNRLMQL-TDCIGECESLTEVILTENQLLVLPRS--IGKLKKLCNLNIDRNKLMS 326

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            P +I     L +  + +N L  +P      T L  LD++ N ++ LP  L S+
Sbjct: 327 LPNEIGGCCSLNVFCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTSL 380


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G                           LI++        +EL     
Sbjct: 286 NQLMYLPDS-IGG---------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT---- 257
           TIGSL  +  L + +N+++ +P SI G  S+ E     N + ALP+ +G+L+ L T    
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 258 -------------------LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
                              L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 31/270 (11%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  L++++N+L+ LP  IG+L  L+ L +  N +  +P+EIG+   L   +  +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP  +G    L     +NN + +LP+++    ++  L +E N+L +L            
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL------------ 110

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                       P+ IG L  L  L L  NR+ ++P  I     L   Y+ NN L+ LP 
Sbjct: 111 ------------PQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPK 158

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  LDL  NQL     E   L RL  L L NN L  LP EIG++  L+ L L+
Sbjct: 159 EIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLS 218

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           GNP  T    +V       LK+L++ + +N
Sbjct: 219 GNPFTTFPQEIVG------LKHLKTLVLQN 242



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 126/258 (48%), Gaps = 5/258 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L LA+N +  L  ++  L  L  L + +N+L+ LP  IG L  L+SL++  N ++ +
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITL 64

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+   L     ++NQL  LP  +G+   L      NN +  LP+++     + +L 
Sbjct: 65  PKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELI 124

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+L  L    I +   L  L  + N L  +P+ IG L  L  LDL  N+++++P  I
Sbjct: 125 LENNRLATLPKE-IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEI 183

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L    + NN L  LP E+G+L  L  LDL  N    +  E   L+     L    
Sbjct: 184 GTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLK----HLKTLV 239

Query: 287 LSGLPPEIGKMTTLRKLL 304
           L  +P  + +   +RKLL
Sbjct: 240 LQNIPALLSEKEKIRKLL 257



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 39/243 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 53  SLNLENNRLITLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L  LP  IG+L  LK L +  N +  +P EIG+   L     ++NQL  LP  
Sbjct: 100 LGLENNQLRILPQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKE 159

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL D   S+N + +LPE++    ++  L ++ N+L  L                 
Sbjct: 160 IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTL----------------- 202

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L  L  LDL  N   + P  I G   L    + N  + AL +E  K+
Sbjct: 203 -------PQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLKTLVLQN--IPALLSEKEKI 253

Query: 253 SKL 255
            KL
Sbjct: 254 RKL 256



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 124/263 (47%), Gaps = 24/263 (9%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L L+NN L+ LP EIGK+  L  L L  N L TL   +        L+ L+S   EN
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEI------GTLQNLQSLNLEN 58

Query: 337 EDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                      LIT+   +    K   L L    L+ +P EI +   +  L L  N ++ 
Sbjct: 59  NR---------LITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRI 109

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +L+ LIL  N++   P  I T L  L  L L NN L  +P +    +  L+
Sbjct: 110 LPQEIGKLQNLKELILENNRLATLPKEIGT-LRKLQHLYLANNQLATLPKE-IGQLQNLK 167

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDLS N + +LPE     +L  L+ L L+  QLR  P +I +LQ L+ LDLS N   + 
Sbjct: 168 DLDLSDNQLVTLPEE--IGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTF 225

Query: 514 PEGFKNLTSLTELDLSDNNISAL 536
           P+    L  L  L L   NI AL
Sbjct: 226 PQEIVGLKHLKTLVLQ--NIPAL 246



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 3/179 (1%)

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L LE   L+ +P EI     +  L+L  N +  LP E+ +   L+ L L+ N++   P  
Sbjct: 31  LRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKE 90

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 481
           I   L  L  L L+NN LR +P +  K   + +++  +  +A+LP+     +L  LQ LY
Sbjct: 91  I-GKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLATLPKE--IGTLRKLQHLY 147

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L   QL   P +I +LQ L+ LDLS N L ++PE    L  L  L L +N +  LP E+
Sbjct: 148 LANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEI 206



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           P L+ L+L   QL   P +I +L++L  L L  N L ++PE    L +L  L+L +N + 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 535 ALPPELVSV 543
            LP E+ ++
Sbjct: 63  TLPKEIGTL 71


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 137/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E + +L  L  L++ +N+L  LP  IG L+ LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIGS   L+  D S N+L++LP  +     L+D   S N +  LP+ +    K+S L
Sbjct: 212 IPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L+   + +   LTEL+ ++N L  +P++IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLTQLT-EAVGNCECLTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P E+   ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTSLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 193/408 (47%), Gaps = 52/408 (12%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+          + ++  E  K +++ + L+KL L+ N I++L  ++ N  
Sbjct: 23  SLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S N + E+P +I     L+  D S N + ++P+       L     +   L+ 
Sbjct: 83  QLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSANDISLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP ++G   NL+  +   N +T LPE +A   ++ +LD+  N+L  L   + A +  L +
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYN-LKD 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P+ IGSL  L+ LD+ +N++  +P  I+G  +L +  +  N L  LP  
Sbjct: 202 LWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDG 261

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +GKL KL  L +  N+L +    V  C+  L+ L L+ N L  LP  IGK+  L      
Sbjct: 262 VGKLKKLSILKVDQNRLTQLTEAVGNCEC-LTELVLTENQLLTLPKSIGKLKKL------ 314

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L   R+ LV+ P                       KE  I     L+V     S+  
Sbjct: 315 -NILNVDRNKLVSLP-----------------------KE--IGGCCSLNV----FSVRD 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
             LS IP EI  A E+  LD++ N +  LP  L+S   L+ L LS N+
Sbjct: 345 NQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTS-LKLKALWLSDNQ 391



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 173/411 (42%), Gaps = 66/411 (16%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLIKLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C SL       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L  +   L+        L  L+ L+L  N L+ LP  +  +  L +L L  N 
Sbjct: 126 ELQNLTCLSANDISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNE 185

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L  L      G   AL                                  K+L L+G  L
Sbjct: 186 LYNLP-----GTIGALYNL-------------------------------KDLWLDGNQL 209

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           + IP EI     +  LD+S N +++LP E++   +L  L++S+N ++  PD +   L  L
Sbjct: 210 AEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGV-GKLKKL 268

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
           S LK+D N L Q+                              +   L EL L   QL  
Sbjct: 269 SILKVDQNRLTQLTE-------------------------AVGNCECLTELVLTENQLLT 303

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P  I +L++L IL++ +N L S+P+      SL    + DN +S +PPE+
Sbjct: 304 LPKSIGKLKKLNILNVDRNKLVSLPKEIGGCCSLNVFSVRDNQLSRIPPEI 354



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 5/191 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S + +EL L+   L  +P   ++  ++ KL LS N IQ LPPE+++   L  L LSRN
Sbjct: 33  RYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRN 92

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I + P++I +   SL       NPL ++P + F ++  L  L  +  ++ +LPEN    
Sbjct: 93  DIPEIPESI-SFCKSLQVADFSGNPLTRLP-ESFPELQNLTCLSANDISLQALPEN--IG 148

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L +L  L LR   L   P  +  LQ+L  LDL  N L ++P     L +L +L L  N 
Sbjct: 149 NLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQ 208

Query: 533 ISALPPELVSV 543
           ++ +P E+ S+
Sbjct: 209 LAEIPQEIGSL 219


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  L  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNLTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L    L +N L+ +P
Sbjct: 369 KLKVTNLSDNRLKNLP 384



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +L+ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNLTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEIEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L   +LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVTNLSDNRLKNLP 384



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  L  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V +LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   NL+  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEIEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVTNLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLP 269


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|147857736|emb|CAN78669.1| hypothetical protein VITISV_031289 [Vitis vinifera]
          Length = 1146

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 251/562 (44%), Gaps = 81/562 (14%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           DLQ L L+ N +   +  ++ NL  L  L +  N LS ++P+ +G+   L  L++  N  
Sbjct: 194 DLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSNQF 253

Query: 104 MK-IPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNN-CITSLPEDLADCS 160
              IP E+G+   LV      N+L   +PSSL +   L+    S N  I ++P +L    
Sbjct: 254 TGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSELGSLR 313

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  NK T      I + T LT L  S N L G +P  IGSL  L  L +H N +
Sbjct: 314 SLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLL 373

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE---ACQ 274
             SIPSSI+ C  L    +  N ++  +P  LG+L  L  L L  N++     +    C 
Sbjct: 374 EGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCS 433

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-- 331
             L++LDL+ N+ SG L P IGK+  L++L       +  ++SLV GP P  +  L    
Sbjct: 434 -NLAILDLARNNFSGVLKPGIGKLYNLQRL-------QAHKNSLV-GPIPPEIGNLTQLF 484

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L  N +S + T   +L  ++    +   + +LEG    AIP EI+E   +++L L  N 
Sbjct: 485 SLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEG----AIPEEIFELKHLSELGLGDNR 540

Query: 392 IQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL-RQVPS----- 444
               +P  +S   SL  L L+ N +     A +  LS L+ L L +N L   +P      
Sbjct: 541 FAGHIPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIAS 600

Query: 445 --------------------DGFKDIPMLQILDLSYN--IASLPEN-------------- 468
                               D    + M+QI+D+S N    S+PE               
Sbjct: 601 MKNMQIYLNFSHNFLSGPIPDEIGKLEMVQIVDMSNNNLSGSIPETLQGCRNLFNLDLSV 660

Query: 469 ---------PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGF 517
                      F+ +  L  L L R  L    P  +  ++ L  LDLSQN  +  IPE +
Sbjct: 661 NELSGPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESY 720

Query: 518 KNLTSLTELDLSDNNISALPPE 539
            N+++L +L+LS N +    PE
Sbjct: 721 ANISTLKQLNLSFNQLEGRVPE 742



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 247/580 (42%), Gaps = 83/580 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL + + +L+   N V    D  G    W EA         H N   +  DL +  +++V
Sbjct: 4   SLEVEHEALKAFKNSVAD--DPFGALADWSEANH-------HCNWSGITCDLSSNHVISV 54

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQLK-ELP 130
             +      ++   +G + +L+ LD+S NS    IP ++G  + L++ +   N L   +P
Sbjct: 55  SLMEKQLAGQISPFLGNISILQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIP 114

Query: 131 SSLGRCLNLSDFKASNNCI-TSLPEDLADCSKMSKLDVEGNKLT---------------- 173
             LG   NL      +N +  S+P+ + +C+ +  L +  N LT                
Sbjct: 115 PELGNLRNLQSLDLGSNFLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQIL 174

Query: 174 -VLSNNLIASWTM-------LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IP 223
            + SNN+I    +       L  L  S N L+G MP  IG+LS L  L L +N +   IP
Sbjct: 175 VLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIP 234

Query: 224 SSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR-LSVL 280
           S +  C  L    + +N  +  +P+ELG L +L  L L+ N+L      +  QL+ L+ L
Sbjct: 235 SELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHL 294

Query: 281 DLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL------------- 326
            +S N L G +P E+G + +L+ L        TL S+   G  PA +             
Sbjct: 295 GISENELIGTIPSELGSLRSLQVL--------TLHSNKFTGKIPAQITNLTNLTILSMSF 346

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
            +L   LP N  S  +      +T+   L        LEG    +IPS I     +  + 
Sbjct: 347 NFLTGELPSNIGSLHNLKN---LTVHNNL--------LEG----SIPSSITNCTHLVNIG 391

Query: 387 LSRNSIQ-ELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L+ N I  E+P  L    +L  L L  NK+  + PD +    S+L+ L L  N    V  
Sbjct: 392 LAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNC-SNLAILDLARNNFSGVLK 450

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRIL 503
            G   +  LQ L    N    P  P   +L  L  L L    L    P ++ +L  L+ L
Sbjct: 451 PGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQGL 510

Query: 504 DLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            L  N+L+ +IPE    L  L+EL L DN  +   P  VS
Sbjct: 511 YLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVS 550



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 248/583 (42%), Gaps = 124/583 (21%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +LQ L L  N +E  + + + N   L  L +  N L+  +P  IG L  L+ L +  N+I
Sbjct: 122 NLQSLDLGSNFLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNI 181

Query: 104 MK-IPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
           +  IP  IG    L   D S NQL   +P  +G   NL   +   N ++  +P +L  C 
Sbjct: 182 IGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCK 241

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           K+  L++  N+ T                        G+P  +G+L +L+ L L++NR+ 
Sbjct: 242 KLIYLNLYSNQFT-----------------------GGIPSELGNLVQLVALKLYKNRLN 278

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQL-KEYCVEACQL-R 276
           S IPSS+     L    +  N L   +P+ELG L  L  L LHSN+   +   +   L  
Sbjct: 279 STIPSSLFQLKYLTHLGISENELIGTIPSELGSLRSLQVLTLHSNKFTGKIPAQITNLTN 338

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L++L +S N L+G LP  IG +  L+ L        T+ ++L+ G  P+ +    + L  
Sbjct: 339 LTILSMSFNFLTGELPSNIGSLHNLKNL--------TVHNNLLEGSIPSSITNC-THLVN 389

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS---- 391
              +    T E    +    ++T   L +  M+   IP +++    +  LDL+RN+    
Sbjct: 390 IGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMS-GNIPDDLFNCSNLAILDLARNNFSGV 448

Query: 392 ---------------------IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
                                +  +PPE+ +   L +L L+ N +       L+ LS L 
Sbjct: 449 LKPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQ 508

Query: 431 CLKLDNNPLR-QVPSDGFK----------------DIPM--------------------- 452
            L LD+N L   +P + F+                 IP                      
Sbjct: 509 GLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLESLLNLYLNGNVLNGS 568

Query: 453 ----------LQILDLSYN--IASLPENPPFSSLPHLQELYL---RRMQLREAPTDILRL 497
                     L ILDLS+N  + S+P  P  +S+ ++Q +YL           P +I +L
Sbjct: 569 IPASMARLSRLAILDLSHNHLVGSIP-GPVIASMKNMQ-IYLNFSHNFLSGPIPDEIGKL 626

Query: 498 QQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPE 539
           + ++I+D+S N+L  SIPE  +   +L  LDLS N +S   PE
Sbjct: 627 EMVQIVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELSGPVPE 669



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 43/334 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN--IEKLKEDLRNLPLLT 71
            N SN ++ D+    +    + G G  +    +LQ+L  AH N  +  +  ++ NL  L 
Sbjct: 430 FNCSNLAILDLARNNFSGVLKPGIGKLY----NLQRL-QAHKNSLVGPIPPEIGNLTQLF 484

Query: 72  VLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK-E 128
            L ++ N LS  +P  + +L +L+ L +  N++   IP+EI     L +     N+    
Sbjct: 485 SLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGH 544

Query: 129 LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLT-VLSNNLIASW-TM 185
           +P ++ +  +L +   + N +  S+P  +A  S+++ LD+  N L   +   +IAS   M
Sbjct: 545 IPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIASMKNM 604

Query: 186 LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 243
              L  S N L+G +P+ IG L  +  +D+  N +  SIP ++ GC +L    +  N LS
Sbjct: 605 QIYLNFSHNFLSGPIPDEIGKLEMVQIVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELS 664

Query: 244 A--------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--L 275
                                      LP  L  +  L +LDL  N+ K    E+     
Sbjct: 665 GPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESYANIS 724

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L  L+LS N L G  PE G    +    L GNP
Sbjct: 725 TLKQLNLSFNQLEGRVPETGIFKNVSASSLVGNP 758


>gi|442618954|ref|NP_001262546.1| flyers-cup, isoform H [Drosophila melanogaster]
 gi|440217398|gb|AGB95928.1| flyers-cup, isoform H [Drosophila melanogaster]
          Length = 571

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 166/368 (45%), Gaps = 65/368 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQK 49
           + K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  
Sbjct: 59  LWKLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNN 117

Query: 50  LILAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAA 86
           L L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A
Sbjct: 118 LDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRA 177

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           +  L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      
Sbjct: 178 MYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPY 237

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP DL +   + K+D+  N LT L                        PE +G L
Sbjct: 238 NHIKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLL 273

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQL 265
            +L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++
Sbjct: 274 RKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKI 332

Query: 266 KEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            E   E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  
Sbjct: 333 TELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTR 392

Query: 325 LLKYLRSR 332
           +LK L  R
Sbjct: 393 ILKTLHDR 400



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 138/285 (48%), Gaps = 21/285 (7%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 219

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L C
Sbjct: 220 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDC 278

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N + ++P   F+    L  L  S N   +      S+LPHL+ L LR  ++ E P
Sbjct: 279 LYLQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELP 336

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            ++  L+ L  LD+S N++  +P    +L  L  L +  N I  +
Sbjct: 337 DELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 539 ELVSV 543
           +LV++
Sbjct: 246 DLVNM 250


>gi|442618950|ref|NP_001262544.1| flyers-cup, isoform F [Drosophila melanogaster]
 gi|440217396|gb|AGB95926.1| flyers-cup, isoform F [Drosophila melanogaster]
          Length = 802

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 165/366 (45%), Gaps = 65/366 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 104 KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 162

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 163 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 222

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 223 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 282

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 283 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 318

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P A    L  L  LDL  N++ E
Sbjct: 319 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 377

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 378 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 437

Query: 327 KYLRSR 332
           K L  R
Sbjct: 438 KTLHDR 443



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 611 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 670

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 671 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 730

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 731 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 790

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 791 AIMSYLRDRIP 801



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 138/285 (48%), Gaps = 21/285 (7%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 158 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 217

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 218 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 262

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L C
Sbjct: 263 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDC 321

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N + ++P   F+    L  L  S N   +      S+LPHL+ L LR  ++ E P
Sbjct: 322 LYLQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELP 379

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            ++  L+ L  LD+S N++  +P    +L  L  L +  N I  +
Sbjct: 380 DELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 424



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 136 SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 194

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 195 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 235

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 236 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 288

Query: 539 ELVSV 543
           +LV++
Sbjct: 289 DLVNM 293



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 31/185 (16%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQT-LILSRNK 414
           ++ L++    L+++P ++++      +  +D +RN +  LP  L     L T L+LS N 
Sbjct: 601 TRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNV 660

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
           I   P  I +  + +S L L NN L  +P++                         F  L
Sbjct: 661 IGYVPQFI-SQFTRISFLNLSNNLLNDLPTE-------------------------FGVL 694

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNI 533
             L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+  L+ LDL +N+I
Sbjct: 695 NTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDI 754

Query: 534 SALPP 538
             +PP
Sbjct: 755 ETVPP 759


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+  ++ D+P E  KN        K+     L  L L  N   +L E +     +T+L
Sbjct: 87  LNLNRNTITDIP-ETLKNC-------KF-----LTNLNLNGNPFTRLPESICECSSITIL 133

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++   L+ LPA IG L  L+ L+   N +  IP  I     L + D   N++++LP+ +
Sbjct: 134 SLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKI 193

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +F A  N + +LP+ ++DC  + +LDV  N++  L  NL  S + LT+L  S 
Sbjct: 194 GKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENL-GSMSSLTDLNVSM 252

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P +IG+L RL  L + +N +  +   I  C +L E Y+G N L+ LP  +G L 
Sbjct: 253 NDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDLK 312

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL++  N L E    + +C+  L+VL L  N +S LP  IGK   +  L +  N L 
Sbjct: 313 NLTTLNVDCNNLIEIPETIGSCK-SLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLT 371

Query: 312 TL 313
           +L
Sbjct: 372 SL 373



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 176/371 (47%), Gaps = 15/371 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P +IG 
Sbjct: 21  SQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSDNEVSVLPPDIGQ 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + ++P +L  C  L++   + N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECSSITILSLNDTTL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  N I S   L  L A +N L  +P +I  L +L  LDL QN I  +P+ I    SL
Sbjct: 141 TSLPAN-IGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY   N L  LP  +     L  LD+  NQ+         +  L+ L++S N +  LP
Sbjct: 200 REFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG +  L+ L +  N L  L   +  G   AL +     L +N  ++   +  DL  +
Sbjct: 260 RSIGNLKRLQMLKVERNNLTQLTPEI--GHCSALTELY---LGQNMLTDLPDSIGDLKNL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T        L+++  NL  IP  I     +T L L +N I ELP  +  C ++  L ++
Sbjct: 315 TT--------LNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVA 366

Query: 412 RNKIKDWPDAI 422
            NK+   P  +
Sbjct: 367 SNKLTSLPFTV 377



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L L  N IE L   +  L  L       N L  LP +I +  ML  LDVS N 
Sbjct: 172 ELKQLEELDLGQNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQ 231

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I ++P+ +GS ++L   + S N + ELP S+G    L   K   N +T L  ++  CS +
Sbjct: 232 INRLPENLGSMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSAL 291

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++L +  N LT L ++ I     LT L    N L  +PETIGS   L  L L QN I  +
Sbjct: 292 TELYLGQNMLTDLPDS-IGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISEL 350

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           P +I  C ++    + +N L++LP  +  L KL  L L  NQ +
Sbjct: 351 PMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQALWLSENQTQ 394



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 179/410 (43%), Gaps = 66/410 (16%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP +  R ++  D   SN  + S+P D+    K+  L++  N +  L   L  +   L  
Sbjct: 7   LPMACQRQVDSLDRSQSN--LQSVPTDIFRFRKLEDLNLTMNNIKELDRRLF-TLRHLRI 63

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N ++ +P  IG L++LI L+L++N I  IP ++  C  L    +  N  + LP  
Sbjct: 64  LDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPES 123

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           + + S +                      ++L L++ +L+ LP  IG +  LR L    N
Sbjct: 124 ICECSSI----------------------TILSLNDTTLTSLPANIGSLVNLRVLEAREN 161

Query: 309 PLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
            L+T+  S+V       LK L    L +NE        EDL     +L+ + +E   +  
Sbjct: 162 HLKTIPLSIVE------LKQLEELDLGQNE-------IEDLPAKIGKLT-SLREFYADMN 207

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
           NL  +P  I +   + +LD+S N I  LP  L S +SL  L +S N I + P +I  +L 
Sbjct: 208 NLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELPRSI-GNLK 266

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
            L  LK++ N L Q+                          P       L ELYL +  L
Sbjct: 267 RLQMLKVERNNLTQL-------------------------TPEIGHCSALTELYLGQNML 301

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            + P  I  L+ L  L++  N+L  IPE   +  SLT L L  N IS LP
Sbjct: 302 TDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELP 351



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 34/242 (14%)

Query: 14  LNLSNRSLRDVP---------NEVYKNFDEAGE-GDKWWEAVDLQKLILAHNNIEKLKED 63
           L+L    + D+P          E Y + +  G   D   +   L +L ++ N I +L E+
Sbjct: 179 LDLGQNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPEN 238

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L ++  LT LNVS N + ELP +IG L  L+ L V  N++ ++  EIG  +AL +     
Sbjct: 239 LGSMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQ 298

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L +LP S+G   NL+      N +  +PE +  C            LTVLS       
Sbjct: 299 NMLTDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCK----------SLTVLS------- 341

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                    +NL++ +P TIG    +  LD+  N++ S+P ++     L   ++  N   
Sbjct: 342 -------LRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQALWLSENQTQ 394

Query: 244 AL 245
           ++
Sbjct: 395 SI 396



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 63/271 (23%)

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +C+  ACQ ++  LD S ++L  +P +I +   L  L LT N ++ L   L        L
Sbjct: 5   FCLPMACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFT------L 58

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           ++LR                        L V+  E+S+       +P +I +  ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNEVSV-------LPPDIGQLTQLIELN 88

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L+RN+I ++P  L +C  L  L L+ N     P++I    SS++ L L++  L       
Sbjct: 89  LNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESI-CECSSITILSLNDTTL------- 140

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                            SLP N    SL +L+ L  R   L+  P  I+ L+QL  LDL 
Sbjct: 141 ----------------TSLPAN--IGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLG 182

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QN ++ +P     LTSL E     NN+  LP
Sbjct: 183 QNEIEDLPAKIGKLTSLREFYADMNNLGTLP 213



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 469 PPFSSLP-----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           P F  LP      +  L   +  L+  PTDI R ++L  L+L+ N+++ +      L  L
Sbjct: 2   PAFFCLPMACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHL 61

Query: 524 TELDLSDNNISALPPEL 540
             LD+SDN +S LPP++
Sbjct: 62  RILDVSDNEVSVLPPDI 78



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           N+ S+P +        L++L L    ++E    +  L+ LRILD+S N +  +P     L
Sbjct: 24  NLQSVPTD--IFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSDNEVSVLPPDIGQL 81

Query: 521 TSLTELDLSDNNISALPPEL 540
           T L EL+L+ N I+ +P  L
Sbjct: 82  TQLIELNLNRNTITDIPETL 101


>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 315

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L   +  NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 120/266 (45%), Gaps = 15/266 (5%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T          P  +  L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF---------PEEITQL 213

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +     +      TT    I     L    K L L G  L+ +P EI +   +  L LS 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNL----KALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQTLILSRNKI 415
           N +  LP E+    +LQTLIL  N I
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L+L    L+ +P EI +   + +L LS N    LP E+    +LQ L L+ N++   P
Sbjct: 79  QKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLP 138

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + I      L  L+LDNN L  +P +    +  L++L LS N + +LPE    + L  LQ
Sbjct: 139 EEI-AQFQKLQWLRLDNNQLANLPQE-ITQLQNLELLFLSGNRLTTLPEE--IAQLRSLQ 194

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LY+   +    P +I +LQ+L+ LDL  N L ++P+    L +L  L L  N ++ LP 
Sbjct: 195 RLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPE 254

Query: 539 ELVSV 543
           E+  +
Sbjct: 255 EITQL 259



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 114/262 (43%), Gaps = 41/262 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDL+   L+ L  EIGK+  L+KL L  N L TL         P  +  LR+        
Sbjct: 58  LDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTL---------PEEIAQLRN-------- 100

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               + L L     + +P EIW+   +  LDL+ N +  LP E+
Sbjct: 101 -------------------LQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEI 141

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +    LQ L L  N++ + P  I T L +L  L L  N L  +P +    +  LQ L + 
Sbjct: 142 AQFQKLQWLRLDNNQLANLPQEI-TQLQNLELLFLSGNRLTTLPEE-IAQLRSLQRLYVY 199

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N   + PE    + L  LQ L L   QL   P +I RLQ L+ L L  N L  +PE   
Sbjct: 200 GNRFTTFPEE--ITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEIT 257

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L +L  L LS N ++ LP E+
Sbjct: 258 QLQNLQTLILSGNQLTTLPKEI 279



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           LQ L+L  N + +LPE    + L +LQ L L   Q    P +I +LQ L+ LDL+ N L 
Sbjct: 78  LQKLNLGSNRLTTLPEE--IAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLT 135

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           ++PE       L  L L +N ++ LP E+  +
Sbjct: 136 TLPEEIAQFQKLQWLRLDNNQLANLPQEITQL 167


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|427791781|gb|JAA61342.1| Putative cytoskeletal regulator flightless-i, partial
           [Rhipicephalus pulchellus]
          Length = 956

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 195/430 (45%), Gaps = 72/430 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ ++  L DVP+EV+ N++             L++L L  N I+ L   L +   L  L
Sbjct: 16  LDYAHHGLEDVPSEVF-NYERT-----------LEELYLNANQIKDLPRPLFHCHGLRKL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N +  LP A+  L  L+ LD+S N++++IPD I     L   + S N + +LP   
Sbjct: 64  NLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGF 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + LN+     ++  +  LP +    SK+  L++  N L VL                  
Sbjct: 124 TQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVL------------------ 165

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+++  L+ L RLD+ QN    +P  I    SL E +  +N L++LP+ +G L 
Sbjct: 166 ------PKSMARLTELSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHL- 218

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                                ++L+ LD S N +S +  EI  MT L  L LT N L+ +
Sbjct: 219 ---------------------IKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKI 257

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  L +L++      D     T  D I   ++L    +EL +    + ++P
Sbjct: 258 ---------PETLGFLQNLTTLRLDDNHLATLPDSIGQLSKL----EELIINSNEIDSLP 304

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
           S I     +T L    N +++LPPE+ SC+ L+ L L  N++ + PD  L  LSSL  + 
Sbjct: 305 STIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDE-LGHLSSLRVVN 363

Query: 434 LDNNPLRQVP 443
           L  N LR +P
Sbjct: 364 LSGNQLRHLP 373



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 2/276 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + + + +++++L L    +E L  +   L  L +L +  N L  LP ++  L  L  LD+
Sbjct: 121 EGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDI 180

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N   ++P+ IGS  +L +  C SN+L  LPS +G  + L+   AS N I+ + +++ +
Sbjct: 181 GQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIEN 240

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +S L +  NKL  +   L      LT L    N L  +P++IG LS+L  L ++ N 
Sbjct: 241 MTMLSDLTLTTNKLQKIPETL-GFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNE 299

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I S+PS+I    +L      +N L  LP E+G  SKL  L L  N+L     E   L  L
Sbjct: 300 IDSLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSL 359

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            V++LS N L  LP  + K+  L  L L+ N  + L
Sbjct: 360 RVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQTKPL 395



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 188/447 (42%), Gaps = 88/447 (19%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++ LD + + +  +P E+      L +   ++NQ+K+LP  L  C  L     S+N I +
Sbjct: 13  VRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQT 72

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP  L+    + +LD+                        SKN +  +P+ I     L  
Sbjct: 73  LPPALSSLISLEELDI------------------------SKNNVIEIPDNIKGCKCLSI 108

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           ++   N +  +P   +   ++ + Y+ +  L  LPA  G+LSKL                
Sbjct: 109 VEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKL---------------- 152

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                  +L+L  N L  LP  + ++T L +L +  N                      +
Sbjct: 153 ------KILELRENHLKVLPKSMARLTELSRLDIGQNDF--------------------T 186

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            LPE   S  S T                EL  +   L+++PS +    ++T LD SRN 
Sbjct: 187 ELPEVIGSLPSLT----------------ELWCDSNRLTSLPSYMGHLIKLTYLDASRNR 230

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           I  +  E+ +   L  L L+ NK++  P+  L  L +L+ L+LD+N L  +P D    + 
Sbjct: 231 ISFIADEIENMTMLSDLTLTTNKLQKIPET-LGFLQNLTTLRLDDNHLATLP-DSIGQLS 288

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ L ++ N I SLP       L +L  L      L + P +I    +LR+L L  N L
Sbjct: 289 KLEELIINSNEIDSLPST--IGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRL 346

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALP 537
            ++P+   +L+SL  ++LS N +  LP
Sbjct: 347 CNVPDELGHLSSLRVVNLSGNQLRHLP 373


>gi|345780094|ref|XP_539413.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Canis lupus familiaris]
          Length = 875

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 263/596 (44%), Gaps = 113/596 (18%)

Query: 13  SLNLSNRSLRDVPNEV---------------YKNFDEAGEGDKWWEAVDLQKLILAHNNI 57
           ++NL  + L++ P ++                KNF  +  GD     + L+ L L  N +
Sbjct: 160 TVNLKAKGLQEFPKDILKSKSVKYLYLDGNQIKNFKGSDSGD----LLGLEILSLQENGL 215

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
             L  +++    L +LNVSHN++S +P  I +L  ++ L ++ N I   P  + S   L 
Sbjct: 216 LSLPPEIQLFHNLRILNVSHNQISHIPKEISQLGNIRQLFLNNNCIENFPSGLKSLGNLE 275

Query: 118 KFDCSSNQLKELPSSLG-----RCLNLS------------------DFKASNNCITSLPE 154
               + N+L+ +P +L      + LNL                       + N I+SLP+
Sbjct: 276 ILSLAKNKLRHIPDTLSGLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPK 335

Query: 155 DL----------ADCSKMSKLDVE-------------GNKLTVLSNNLIASWTMLTELIA 191
           ++           D +K++ L VE             GNKL V+S+  I ++  L  LI 
Sbjct: 336 EIRELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTGNKLEVISHK-IENFKELRILIL 394

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KNLL  +PE I     L  L L  N+++ +P +I    +L +  +  N +  +P ++  
Sbjct: 395 DKNLLKEVPEKISHCVMLEYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISH 454

Query: 252 LSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L+ + +L+   N + +  +E   C+ +++ ++LS N +   P  +  + +L  L   GN 
Sbjct: 455 LNNIISLEFSGNIITDIPIEVKNCK-KITKVELSYNKIMYFPVGLCALDSLYYLNFNGNY 513

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +                    S +P     + S +K+ L             L L    L
Sbjct: 514 I--------------------SEIP----VDISFSKQLL------------NLELNKNKL 537

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
                 +     +  LDL +N I+++PP +S+  SLQ LIL  NK + +P  + T L +L
Sbjct: 538 LIFSEHLCSLTNLEYLDLGKNQIRKIPPSISNMVSLQVLILCCNKFEVFPIEVCT-LENL 596

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM--- 485
             L L  N ++ VPSD   ++  +Q L++S N     P       L  L+EL + ++   
Sbjct: 597 QVLDLSINQIQNVPSD-ICNLKRIQKLNISSNQFMYFP--IELCRLQSLEELNISQINGR 653

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           +L   P ++  L QL+ LD+S N+++ IP     L SL  L+  +N IS LPP  +
Sbjct: 654 KLTRLPEELSNLTQLKRLDISDNAIREIPRNIGELRSLVSLNAYNNQISYLPPSFL 709



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 249/554 (44%), Gaps = 57/554 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L L +N IE     L++L  L +L
Sbjct: 231 LNVSHNQISHIPKEI----SQLG---------NIRQLFLNNNCIENFPSGLKSLGNLEIL 277

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ NKL  +P  +  L  LK L++ +N +   P  +     L+    + N +  LP  +
Sbjct: 278 SLAKNKLRHIPDTLSGLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEI 337

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    KM +L + GNKL V+S+  I ++  L  LI  K
Sbjct: 338 RELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTGNKLEVISHK-IENFKELRILILDK 396

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L  L +L ++ N I+ IP  IS   
Sbjct: 397 NLLKEVPEKISHCVMLEYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLN 456

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N++  + V  C L  L  L+ + N +S 
Sbjct: 457 NIISLEFSGNIITDIPIEVKNCKKITKVELSYNKIMYFPVGLCALDSLYYLNFNGNYISE 516

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P +I     L  L L  N L      L +      L+YL   L +N+  +   +  +++
Sbjct: 517 IPVDISFSKQLLNLELNKNKLLIFSEHLCSLTN---LEYLD--LGKNQIRKIPPSISNMV 571

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
           ++   +   +K            P E+     +  LDLS N IQ +P ++ +   +Q L 
Sbjct: 572 SLQVLILCCNK--------FEVFPIEVCTLENLQVLDLSINQIQNVPSDICNLKRIQKLN 623

Query: 410 LSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           +S N+   +P  +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I  +P
Sbjct: 624 ISSNQFMYFPIELCRLQSLEELNISQINGRKLTRLPEE-LSNLTQLKRLDISDNAIREIP 682

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
            N     L  L  L     Q+   P   L L  L+ L+LS N+L ++P G  NL SL E+
Sbjct: 683 RN--IGELRSLVSLNAYNNQISYLPPSFLCLNDLQQLNLSGNNLTALPIGIHNLFSLKEI 740

Query: 527 DLSDNNISALPPEL 540
           +  DN +   P E+
Sbjct: 741 NFDDNPLLRPPMEI 754



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 43/392 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++++ E + +  +L  L++S NKL ELP  I +L  L+ L V+ N+I++
Sbjct: 388 ELRILILDKNLLKEVPEKISHCVMLEYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVR 447

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP++I     ++  + S N + ++P  +  C  ++  + S N I   P  L     +  L
Sbjct: 448 IPEDISHLNNIISLEFSGNIITDIPIEVKNCKKITKVELSYNKIMYFPVGLCALDSLYYL 507

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +  GN ++ +  ++  S  +L  L  +KN L    E + SL+ L  LDL +N+I  IP S
Sbjct: 508 NFNGNYISEIPVDISFSKQLLN-LELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIPPS 566

Query: 226 ISG---------CCSLAEFY--------------MGNNALSALPAELGKLSKLGTLDLHS 262
           IS          CC+  E +              +  N +  +P+++  L ++  L++ S
Sbjct: 567 ISNMVSLQVLILCCNKFEVFPIEVCTLENLQVLDLSINQIQNVPSDICNLKRIQKLNISS 626

Query: 263 NQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           NQ   + +E C+L+    L++  ++   L+ LP E+  +T L++L ++ N +R +     
Sbjct: 627 NQFMYFPIELCRLQSLEELNISQINGRKLTRLPEELSNLTQLKRLDISDNAIREI----- 681

Query: 319 NGPTPALLKYLRSRLPENE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LRS +  N  +++ S      + +        ++L+L G NL+A+P  I 
Sbjct: 682 ----PRNIGELRSLVSLNAYNNQISYLPPSFLCLNDL-----QQLNLSGNNLTALPIGIH 732

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
               + +++   N +   P E+     L T++
Sbjct: 733 NLFSLKEINFDDNPLLRPPMEICKGKQLYTIV 764



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 17/335 (5%)

Query: 222 IPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            P  I    S+   Y+  N +     ++ G L  L  L L  N L     E      L +
Sbjct: 171 FPKDILKSKSVKYLYLDGNQIKNFKGSDSGDLLGLEILSLQENGLLSLPPEIQLFHNLRI 230

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L++S+N +S +P EI ++  +R+L L  N +    S L +     +L   +++L    D+
Sbjct: 231 LNVSHNQISHIPKEISQLGNIRQLFLNNNCIENFPSGLKSLGNLEILSLAKNKLRHIPDT 290

Query: 340 EASTTKEDLITM-ATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSR 389
            +      ++ +   +L++  K L          L G  +S++P EI E   + KL L  
Sbjct: 291 LSGLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDH 350

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  L  E+     ++ L L+ NK++     I  +   L  L LD N L++VP +    
Sbjct: 351 NKLTFLAVEIFQLLKMKELQLTGNKLEVISHKI-ENFKELRILILDKNLLKEVP-EKISH 408

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
             ML+ L LS N +  LP+N     L +L++L +    +   P DI  L  +  L+ S N
Sbjct: 409 CVMLEYLSLSCNKLMELPKN--IYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGN 466

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +  IP   KN   +T+++LS N I   P  L ++
Sbjct: 467 IITDIPIEVKNCKKITKVELSYNKIMYFPVGLCAL 501


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 190/398 (47%), Gaps = 61/398 (15%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-------------- 88
           E + L +L L+   ++ L E L  L LLT L++  N+L  LPA+IG              
Sbjct: 50  ELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQ 109

Query: 89  ---------ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
                    +L  L  L++ +N +  +P+ + +   + + D S N+L  +P  LG    L
Sbjct: 110 LETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRL 169

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +    + N + +LP   A+ +++++L++ GN+L  L  + IA+++ L+EL  S N L  +
Sbjct: 170 TKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLP-DFIANFSQLSELEISGNQLGSL 228

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           PE IG L  L  LD+  N + ++P ++    +L+   + NN L++LPA  G L +L  L 
Sbjct: 229 PEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRLS 288

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L  NQL      A Q+ RL+VLDLS+N L  LP  I + + L  L L  N L        
Sbjct: 289 LAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYNEL-------- 340

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                       + LP++            I + T L V    L++   N+ A+P  +  
Sbjct: 341 ------------TELPDD------------IGLLTELEV----LNIAHNNIGALPPSVAN 372

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
             ++T+LDLS   I  LP  +S+   L  L +   ++K
Sbjct: 373 LTKMTRLDLSSTQIPYLPKFISNLNRLCILDVRNTRMK 410



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 134/282 (47%), Gaps = 25/282 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L KL L +N +  L E L     +T L++S N+L  +P  +G    L  L++
Sbjct: 115 DSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNL 174

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +P    + T L + + S N+LK+LP  +     LS+ + S N + SLPE +  
Sbjct: 175 ARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGSLPEYIGR 234

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++  LD+ GN LT L                        PET+G L  L  LD+H NR
Sbjct: 235 LKELHHLDISGNMLTTL------------------------PETLGDLQNLSILDIHNNR 270

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + S+P++      L    + +N LS LP    ++ +L  LDL  N+L +     CQ   L
Sbjct: 271 LTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHL 330

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + L L  N L+ LP +IG +T L  L +  N +  L  S+ N
Sbjct: 331 NDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVAN 372



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 195/419 (46%), Gaps = 48/419 (11%)

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP E      L + D S  +L+ LP +LG    L++     N + SLP  + D S + +
Sbjct: 43  RIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRR 102

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L  L ++  A  T LT+L    N +  +PE + + + +  LDL  NR+L +P 
Sbjct: 103 LDLKWNQLETLPDS-FAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPL 161

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLD 281
            +     L +  +  N L  LP     L++L  L+L  N+LK+   +     Q  LS L+
Sbjct: 162 FLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQ--LSELE 219

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           +S N L  LP  IG++  L  L ++GN L T                    LPE      
Sbjct: 220 ISGNQLGSLPEYIGRLKELHHLDISGNMLTT--------------------LPE------ 253

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             T  DL  ++         L +    L+++P+     G++ +L L+ N +  LPP  + 
Sbjct: 254 --TLGDLQNLSI--------LDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQ 303

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              L  L LS N++   P+ I    S L+ L L  N L ++P D    +  L++L++++ 
Sbjct: 304 MQRLAVLDLSHNRLMQLPNFI-CQFSHLNDLHLGYNELTELPDD-IGLLTELEVLNIAHN 361

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
           NI +LP  P  ++L  +  L L   Q+   P  I  L +L ILD+ +N+   IP    N
Sbjct: 362 NIGALP--PSVANLTKMTRLDLSSTQIPYLPKFISNLNRLCILDV-RNTRMKIPLALAN 417



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 178/381 (46%), Gaps = 37/381 (9%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P    EL  L  LD+SF  +  +P+ +G    L + D   N+LK LP+S+G    L   
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL 103

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTV---------------LSNN-------LI 180
               N + +LP+  A  + ++KL++  NK+T                LS+N        +
Sbjct: 104 DLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFL 163

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            ++T LT+L  ++N L  +P    +L++L RL+L  N +  +P  I+    L+E  +  N
Sbjct: 164 GNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGN 223

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L +LP  +G+L +L  LD+  N L         L+ LS+LD+ NN L+ LP   G +  
Sbjct: 224 QLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFGNLGQ 283

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L +L L  N L  L          A+L    +RL +           + I   + L+   
Sbjct: 284 LHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQ---------LPNFICQFSHLN--- 331

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
            +L L    L+ +P +I    E+  L+++ N+I  LPP +++   +  L LS  +I   P
Sbjct: 332 -DLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLP 390

Query: 420 DAILTSLSSLSCLKLDNNPLR 440
             I ++L+ L  L + N  ++
Sbjct: 391 KFI-SNLNRLCILDVRNTRMK 410



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 183/388 (47%), Gaps = 43/388 (11%)

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P + ++   +++LD+   +L  L   L     +LTEL    N L  +P +IG LS L R
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETL-GELALLTELDLRGNELKSLPASIGDLSLLRR 102

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  N++ ++P S +    L +  +G N +++LP  L   + +  LDL  N+L    + 
Sbjct: 103 LDLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLF 162

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                RL+ L+L+ N L  LPP    +T L +L L+GN L+ L                 
Sbjct: 163 LGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQL----------------- 205

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                           D I   ++LS    EL + G  L ++P  I    E+  LD+S N
Sbjct: 206 ---------------PDFIANFSQLS----ELEISGNQLGSLPEYIGRLKELHHLDISGN 246

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP  L    +L  L +  N++   P A   +L  L  L L +N L  +P    + +
Sbjct: 247 MLTTLPETLGDLQNLSILDIHNNRLTSLP-ANFGNLGQLHRLSLAHNQLSLLPPPAAQ-M 304

Query: 451 PMLQILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L +LDLS+N   L + P F     HL +L+L   +L E P DI  L +L +L+++ N+
Sbjct: 305 QRLAVLDLSHN--RLMQLPNFICQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNN 362

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALP 537
           + ++P    NLT +T LDLS   I  LP
Sbjct: 363 IGALPPSVANLTKMTRLDLSSTQIPYLP 390



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 40/349 (11%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PET+G L+ L  LDL  N + S+P+SI     L    +  N L  LP    KL+ L
Sbjct: 64  LQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLPDSFAKLTGL 123

Query: 256 GTLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L+L  N++     V      ++ LDLS+N L  +P  +G  T L KL L  N L  L 
Sbjct: 124 TKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNLARNKLENLP 183

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
               N                             +T  TRL+++  EL         +P 
Sbjct: 184 PVCAN-----------------------------LTQLTRLNLSGNELK-------QLPD 207

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
            I    ++++L++S N +  LP  +     L  L +S N +   P+  L  L +LS L +
Sbjct: 208 FIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPET-LGDLQNLSILDI 266

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            NN L  +P++ F ++  L  L L++N  SL   PP + +  L  L L   +L + P  I
Sbjct: 267 HNNRLTSLPAN-FGNLGQLHRLSLAHNQLSLLP-PPAAQMQRLAVLDLSHNRLMQLPNFI 324

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +   L  L L  N L  +P+    LT L  L+++ NNI ALPP + ++
Sbjct: 325 CQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANL 373



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 9/202 (4%)

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +E +   ED I       +    L L    L ++P  + E   +T+LDL  N ++ LP  
Sbjct: 34  AEDNNIGEDRIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPAS 93

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL 456
           +   + L+ L L  N+++  PD+    L+ L+ L+L  N +  +P     F  I     L
Sbjct: 94  IGDLSLLRRLDLKWNQLETLPDSF-AKLTGLTKLELGYNKMTSLPEVLTAFNHITE---L 149

Query: 457 DLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           DLS N   L   P F  +   L +L L R +L   P     L QL  L+LS N L+ +P+
Sbjct: 150 DLSDN--RLLRVPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPD 207

Query: 516 GFKNLTSLTELDLSDNNISALP 537
              N + L+EL++S N + +LP
Sbjct: 208 FIANFSQLSELEISGNQLGSLP 229



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDLS+  + SLPE      L  L EL LR  +L+  P  I  L  LR LDL  N L+++P
Sbjct: 57  LDLSFRRLQSLPET--LGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLP 114

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
           + F  LT LT+L+L  N +++LP  L + 
Sbjct: 115 DSFAKLTGLTKLELGYNKMTSLPEVLTAF 143


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 191/436 (43%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD   N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDFSKNNIEMVEEGISACE-NLQDLILSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLNGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            S+N+I+ +   +S+C +LQ LILS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 FSKNNIEMVEEGISACENLQDLILSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   + + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +LI S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LD S N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLP 269


>gi|357614953|gb|EHJ69388.1| hypothetical protein KGM_05974 [Danaus plexippus]
          Length = 710

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 132/241 (54%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + LQ L L  N ++ L E L+NL  L  L++  N++ ELP  IGEL  L+ L +  N + 
Sbjct: 73  ISLQSLELRENLLKSLPESLKNLTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQ 132

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG+  AL+  D S N+L+ +P  +G   +L+D   S N + ++P  + D SK++ 
Sbjct: 133 NLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSKLAI 192

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N+L  L+ N +   T L ELI ++N L  +P++IG+L+ L  L++ +N +  IP 
Sbjct: 193 LKLDQNRLHTLNEN-VGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPL 251

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    + +N L+ LP ELG    L  LD+  N+L+        L L  + LS 
Sbjct: 252 EIGNMTLLGVLSLRDNKLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVNLELKAVWLSE 311

Query: 285 N 285
           N
Sbjct: 312 N 312



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 2/274 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N I +L      L  LTVL ++   L+ LP+  G L  L+SL++  N +  +
Sbjct: 29  LQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSLISLQSLELRENLLKSL 88

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + T L + D   N+++ELP  +G    L +    +N + +LP ++ +   +  LD
Sbjct: 89  PESLKNLTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQNLPSEIGNLKALICLD 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL  +  + I   + LT+L  S+N+L  +P  IG LS+L  L L QNR+ ++  ++
Sbjct: 149 VSENKLERIPED-IGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNENV 207

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C SL E  +  N L+ LP  +G L++L  L++  N L +  +E   +  L VL L +N
Sbjct: 208 GRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDN 267

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+ LP E+G   +L  L ++GN L+ L  +LVN
Sbjct: 268 KLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVN 301



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 129/286 (45%), Gaps = 25/286 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +  +S   + ++P  I +L  L+  D S N I ++P       AL     +   L  LPS
Sbjct: 8   IFKLSGFYIPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPS 67

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
             G  ++L   +   N + SLPE L + +K+ +LD+  N++  L    I     L EL  
Sbjct: 68  DFGSLISLQSLELRENLLKSLPESLKNLTKLERLDLGDNEIEELP-GFIGELPALQELWL 126

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG+L  LI LD+ +N++  IP  I G  SL + ++  N L  +P  +G 
Sbjct: 127 DHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGD 186

Query: 252 LSKLGTLDLHSNQLKE------YCVEACQL------------------RLSVLDLSNNSL 287
           LSKL  L L  N+L         C    +L                   L+VL++  NSL
Sbjct: 187 LSKLAILKLDQNRLHTLNENVGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSL 246

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             +P EIG MT L  L L  N L  L + L N  +  +L    +RL
Sbjct: 247 GDIPLEIGNMTLLGVLSLRDNKLTKLPNELGNCKSLHVLDVSGNRL 292



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 147/317 (46%), Gaps = 47/317 (14%)

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS    L+ FY+ +     +P ++ KL  L   D  SN +        QLR L+VL L++
Sbjct: 5   ISEIFKLSGFYIPD-----IPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLND 59

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
            SL+ LP + G + +L+ L L  N L++L  SL N     L K  R  L +NE       
Sbjct: 60  MSLTSLPSDFGSLISLQSLELRENLLKSLPESLKN-----LTKLERLDLGDNE------- 107

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                                   +  +P  I E   + +L L  N +Q LP E+ +  +
Sbjct: 108 ------------------------IEELPGFIGELPALQELWLDHNKLQNLPSEIGNLKA 143

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L  L +S NK++  P+ I   LSSL+ L L  N L  VP +G  D+  L IL L  N + 
Sbjct: 144 LICLDVSENKLERIPEDI-GGLSSLTDLHLSQNMLETVP-NGIGDLSKLAILKLDQNRLH 201

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
           +L EN        LQEL L    L E P  I  L +L +L++ +NSL  IP    N+T L
Sbjct: 202 TLNEN--VGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLL 259

Query: 524 TELDLSDNNISALPPEL 540
             L L DN ++ LP EL
Sbjct: 260 GVLSLRDNKLTKLPNEL 276



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 56/327 (17%)

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I  IP++I    AL   D SSN +  LP+   +   L+    ++  +TSLP D      +
Sbjct: 16  IPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSLISL 75

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L++                         +NLL  +PE++ +L++L RLDL  N I  +
Sbjct: 76  QSLELR------------------------ENLLKSLPESLKNLTKLERLDLGDNEIEEL 111

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P  I    +L E ++ +N L  LP+E+G L  L             C          LD+
Sbjct: 112 PGFIGELPALQELWLDHNKLQNLPSEIGNLKAL------------IC----------LDV 149

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEA 341
           S N L  +P +IG +++L  L L+ N L T+ + + +    A+LK  ++RL   NE+   
Sbjct: 150 SENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNENVGR 209

Query: 342 STTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            T+ ++LI     L+   K          L+++  +L  IP EI     +  L L  N +
Sbjct: 210 CTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDNKL 269

Query: 393 QELPPELSSCASLQTLILSRNKIKDWP 419
            +LP EL +C SL  L +S N+++  P
Sbjct: 270 TKLPNELGNCKSLHVLDVSGNRLQYLP 296



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 5/183 (2%)

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           ++ S+   L G  +  IP +I +   +   D S N I  LP   S   +L  L L+   +
Sbjct: 3   TLISEIFKLSGFYIPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSL 62

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSL 474
              P +   SL SL  L+L  N L+ +P +  K++  L+ LDL  N   + E P F   L
Sbjct: 63  TSLP-SDFGSLISLQSLELRENLLKSLP-ESLKNLTKLERLDLGDN--EIEELPGFIGEL 118

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           P LQEL+L   +L+  P++I  L+ L  LD+S+N L+ IPE    L+SLT+L LS N + 
Sbjct: 119 PALQELWLDHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLE 178

Query: 535 ALP 537
            +P
Sbjct: 179 TVP 181



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P DI +L+ L+I D S N +  +P GF  L +LT L L+D ++++LP +  S+
Sbjct: 20  PEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSL 72


>gi|432905687|ref|XP_004077467.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Oryzias
           latipes]
          Length = 724

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 124/222 (55%), Gaps = 1/222 (0%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  L  L  L++  N+L ELP +IG L  LK L +  N ++++P  +     LV  D S 
Sbjct: 167 LSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSE 226

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+ LP  LG   NL+D   S N I +LPE +    K+S L V+ N+L  L  + I S 
Sbjct: 227 NKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPES-IGSC 285

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L ELI ++N +  +P +IG L +L  L+  +N++ S+P  I GCCSL  F M +N L+
Sbjct: 286 ESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLT 345

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
            +PAEL + ++L  LD+  N+L    +    L+L  L LS N
Sbjct: 346 RIPAELSQATELHVLDVSGNRLAYLPLSLTTLQLKALWLSEN 387



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 196/429 (45%), Gaps = 69/429 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R    ++  +RSL  VP+E+++                L++L L  N I +L ++L 
Sbjct: 9   RCNRHVEVIDYRHRSLLYVPDEIFRY------------GRSLEELQLDANQIRQLPKELF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I  L +L  LDVS N + +IP+ I    AL   D S N 
Sbjct: 57  QLLKLRKLTLSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNP 116

Query: 126 LKELPSSLGR-----CLNLSDF----------KASNNCI-TSLP----EDLADCSKMSKL 165
           L  LP++        CL+++D           K+ + CI TSL       L++  K+  L
Sbjct: 117 LTRLPATFPDLQSLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYSSLSELHKLEGL 176

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L  + I + + L EL    N L  +P T+  +  L+ LD+ +N++  +P  
Sbjct: 177 DLGSNELEELPKS-IGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQE 235

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           + G  +L +  +  N++ ALP  +GKL K                      LS+L +  N
Sbjct: 236 LGGLENLTDLLVSQNSIEALPESIGKLQK----------------------LSILKVDQN 273

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP  IG   +L +L+LT N +++L         P  +  L+     N D    T+ 
Sbjct: 274 RLNCLPESIGSCESLAELILTENQIKSL---------PRSIGKLKKLFNLNCDRNQLTSL 324

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I     L+V      +    L+ IP+E+ +A E+  LD+S N +  LP  L++   L
Sbjct: 325 PKEIGGCCSLNV----FCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSLTT-LQL 379

Query: 406 QTLILSRNK 414
           + L LS N+
Sbjct: 380 KALWLSENQ 388



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 153/353 (43%), Gaps = 39/353 (11%)

Query: 199 MPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           +P+ I    R L  L L  N+I  +P  +     L +  + +N +  LP E+  L  L  
Sbjct: 27  VPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDNEIQVLPPEIANLMLLVD 86

Query: 258 LDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           LD+  N + E    +  C+  L V D S N L+ LP     + +L  L +    L+ L  
Sbjct: 87  LDVSRNDVYEIPESISHCK-ALQVADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPD 145

Query: 316 SLVNGPT----PALLKYLRSRLPENEDSEA----STTKEDLITMATRLSVTSKELSLEGM 367
                P+     +L  ++ S L E    E     S   E+L      LS   KEL L+G 
Sbjct: 146 DFGKSPSCCIPTSLASFIYSSLSELHKLEGLDLGSNELEELPKSIGNLS-NLKELWLDGN 204

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P+ +     +  LD+S N ++ LP EL    +L  L++S+N I+  P++I   L 
Sbjct: 205 QLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALPESI-GKLQ 263

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
            LS LK+D N L                         LPE+    S   L EL L   Q+
Sbjct: 264 KLSILKVDQNRLN-----------------------CLPES--IGSCESLAELILTENQI 298

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +  P  I +L++L  L+  +N L S+P+      SL    + DN ++ +P EL
Sbjct: 299 KSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAEL 351



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 60/286 (20%)

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C   + V+D  + SL  +P EI +   +L +L L  N +R L   L       LLK  + 
Sbjct: 10  CNRHVEVIDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQ-----LLKLRKL 64

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L +NE                               +  +P EI     +  LD+SRN 
Sbjct: 65  TLSDNE-------------------------------IQVLPPEIANLMLLVDLDVSRND 93

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK--- 448
           + E+P  +S C +LQ    S N +   P A    L SL CL +++  L+++P D  K   
Sbjct: 94  VYEIPESISHCKALQVADFSGNPLTRLP-ATFPDLQSLVCLSINDISLQRLPDDFGKSPS 152

Query: 449 ----------------DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
                           ++  L+ LDL  N +  LP++    +L +L+EL+L   QL E P
Sbjct: 153 CCIPTSLASFIYSSLSELHKLEGLDLGSNELEELPKS--IGNLSNLKELWLDGNQLVELP 210

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             + R++ L  LD+S+N L+ +P+    L +LT+L +S N+I ALP
Sbjct: 211 ATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIEALP 256



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 185/445 (41%), Gaps = 77/445 (17%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++ +D    S++ +PDEI     +L +    +NQ+++LP  L + L L     S+N I  
Sbjct: 14  VEVIDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDNEIQV 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        IA+  +L +L  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------IANLMLLVDLDVSRNDVYEIPESISHCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P++     SL    + + +L  LP + GK             L  +   
Sbjct: 110 ADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPDDFGKSPSCCI----PTSLASFIYS 165

Query: 272 ACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +     +L  LDL +N L  LP  IG ++ L++L L GN L  L         PA L  +
Sbjct: 166 SLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVEL---------PATLCRI 216

Query: 330 RSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R+ +  +  +++     ++L  +     +   + S+E     A+P  I +  +++ L + 
Sbjct: 217 RNLVCLDVSENKLEGLPQELGGLENLTDLLVSQNSIE-----ALPESIGKLQKLSILKVD 271

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDG 446
           +N +  LP  + SC SL  LIL+ N+IK  P +I  L  L +L+C   D N L  +P + 
Sbjct: 272 QNRLNCLPESIGSCESLAELILTENQIKSLPRSIGKLKKLFNLNC---DRNQLTSLPKE- 327

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                                         L    +R  +L   P ++ +  +L +LD+S
Sbjct: 328 ------------------------IGGCCSLNVFCMRDNRLTRIPAELSQATELHVLDVS 363

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDN 531
            N L  +P     L  L  L LS+N
Sbjct: 364 GNRLAYLPLSLTTL-QLKALWLSEN 387



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 68/340 (20%)

Query: 212 LDLHQNRILSIPSSISGCC-SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +D     +L +P  I     SL E  +  N +  LP EL +L KL  L L  N+++    
Sbjct: 17  IDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDNEIQVLPP 76

Query: 271 EACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   L L V LD+S N +  +P  I     L+    +GNPL  L         PA    L
Sbjct: 77  EIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPLTRL---------PATFPDL 127

Query: 330 RS------------RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           +S            RLP++     S        + T L+             S I S + 
Sbjct: 128 QSLVCLSINDISLQRLPDDFGKSPSCC------IPTSLA-------------SFIYSSLS 168

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           E  ++  LDL  N ++ELP  + + ++L+ L L  N++ + P A L  + +L CL +  N
Sbjct: 169 ELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELP-ATLCRIRNLVCLDVSEN 227

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
            L  +P +                            L +L +L + +  +   P  I +L
Sbjct: 228 KLEGLPQE-------------------------LGGLENLTDLLVSQNSIEALPESIGKL 262

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           Q+L IL + QN L  +PE   +  SL EL L++N I +LP
Sbjct: 263 QKLSILKVDQNRLNCLPESIGSCESLAELILTENQIKSLP 302



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N ++ +P+    L  L +L LSDN I 
Sbjct: 13  HVEVIDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ ++
Sbjct: 73  VLPPEIANL 81


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 9/287 (3%)

Query: 58  EKLKEDLRNLPLLTVLNVSHNK----LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           EK+KE  +    L +L++S+      L+ +P  + EL  ++ L++S N I +IP+ I + 
Sbjct: 12  EKIKEARK--KKLEILDLSNGYRTQPLTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNI 69

Query: 114 TALVKFDCSSNQLKELPS-SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           T LV+ D S NQ+ +LP  + G  +NL +   S N + +LPE L +   + KL +  N+L
Sbjct: 70  TNLVRLDLSRNQITKLPQKNFGNFINLIELDLSKNNLINLPESLGELPNLKKLYLSRNQL 129

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L  +L  +   LTEL  S N LN  PE++G+LS L RLDL  N +  +P  +     L
Sbjct: 130 KKLPVSL-GNLYNLTELDLSLNKLNTFPESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKL 188

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            E Y+ NN L+ LP  LG +  L  L L +NQL         L  L+ LDLS N LS LP
Sbjct: 189 TELYLWNNQLTHLPESLGNILNLSKLHLWNNQLTYLPKSIGNLSNLTSLDLSYNQLSKLP 248

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
             I  ++ L  L L+GNPL      +V+G   A+ +Y R    E +D
Sbjct: 249 ENIVNLSNLTHLDLSGNPLVVPPPEVVSGGVGAIKQYFRQLRKEGKD 295



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 19/255 (7%)

Query: 14  LNLSN----RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           L+LSN    + L ++P EV+             E   ++ L L+ N I ++ E + N+  
Sbjct: 25  LDLSNGYRTQPLTNIPEEVF-------------ELKQIRVLNLSGNRIYQIPEYISNITN 71

Query: 70  LTVLNVSHNKLSELPAA-IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L++S N++++LP    G    L  LD+S N+++ +P+ +G    L K   S NQLK+
Sbjct: 72  LVRLDLSRNQITKLPQKNFGNFINLIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKK 131

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP SLG   NL++   S N + + PE L + S +S+LD+ GN L  L +  + ++  LTE
Sbjct: 132 LPVSLGNLYNLTELDLSLNKLNTFPESLGNLSNLSRLDLVGNNLNKLPD-FLGNFYKLTE 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +PE++G++  L +L L  N++  +P SI    +L    +  N LS LP  
Sbjct: 191 LYLWNNQLTHLPESLGNILNLSKLHLWNNQLTYLPKSIGNLSNLTSLDLSYNQLSKLPEN 250

Query: 249 LGKLSKLGTLDLHSN 263
           +  LS L  LDL  N
Sbjct: 251 IVNLSNLTHLDLSGN 265



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 13/204 (6%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+KL L+ N ++KL   L NL  LT L++S NKL+  P ++G L  L  LD+  N+
Sbjct: 115 ELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPESLGNLSNLSRLDLVGNN 174

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + K+PD +G+   L +    +NQL  LP SLG  LNLS     NN +T LP+ + + S +
Sbjct: 175 LNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLHLWNNQLTYLPKSIGNLSNL 234

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKN--------LLNGMPETIGSLSRLIRLD- 213
           + LD+  N+L+ L  N I + + LT L  S N        +++G    I    R +R + 
Sbjct: 235 TSLDLSYNQLSKLPEN-IVNLSNLTHLDLSGNPLVVPPPEVVSGGVGAIKQYFRQLRKEG 293

Query: 214 ---LHQNRILSIPSSISGCCSLAE 234
              +++ ++L +  + +G  SLA+
Sbjct: 294 KDYIYEAKLLIVGEAGAGKTSLAK 317



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 21/273 (7%)

Query: 264 QLKEYCVEACQLRLSVLDLSNNS----LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + +E   EA + +L +LDLSN      L+ +P E+ ++  +R L L+GN +  +   + N
Sbjct: 9   RFREKIKEARKKKLEILDLSNGYRTQPLTNIPEEVFELKQIRVLNLSGNRIYQIPEYISN 68

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                +   +R  L  N+      TK         +++   EL L   NL  +P  + E 
Sbjct: 69  -----ITNLVRLDLSRNQ-----ITKLPQKNFGNFINLI--ELDLSKNNLINLPESLGEL 116

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             + KL LSRN +++LP  L +  +L  L LS NK+  +P++ L +LS+LS L L  N L
Sbjct: 117 PNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPES-LGNLSNLSRLDLVGNNL 175

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
            ++P D   +   L  L L  N +  LPE+    ++ +L +L+L   QL   P  I  L 
Sbjct: 176 NKLP-DFLGNFYKLTELYLWNNQLTHLPES--LGNILNLSKLHLWNNQLTYLPKSIGNLS 232

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
            L  LDLS N L  +PE   NL++LT LDLS N
Sbjct: 233 NLTSLDLSYNQLSKLPENIVNLSNLTHLDLSGN 265



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 27/170 (15%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ IP E++E  +I  L+LS N I ++P  +S+  +L  L LSRN+I             
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQIT------------ 83

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
                       ++P   F +   L  LDLS N + +LPE+     LP+L++LYL R QL
Sbjct: 84  ------------KLPQKNFGNFINLIELDLSKNNLINLPES--LGELPNLKKLYLSRNQL 129

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           ++ P  +  L  L  LDLS N L + PE   NL++L+ LDL  NN++ LP
Sbjct: 130 KKLPVSLGNLYNLTELDLSLNKLNTFPESLGNLSNLSRLDLVGNNLNKLP 179


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 184/377 (48%), Gaps = 37/377 (9%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D
Sbjct: 75  GWQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIAD 134

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            S N +M++P        L     +   L+ LP ++G   NL+  +   N +T LP+ L 
Sbjct: 135 FSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLT 194

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
              ++ +LD+  N++  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +N
Sbjct: 195 QLRRLEELDLGNNEIHSLPES-IGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 253

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
           R+  +P  ISG  SL +  +  N L  +P  +GKL K                      L
Sbjct: 254 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------L 291

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           S+L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + 
Sbjct: 292 SILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADR 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           +   S  KE  I     L+V      L    L+ IP+E+ +A E+  LDL+ N +  LP 
Sbjct: 345 NKLVSLPKE--IGGCCSLTV----FCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPL 398

Query: 398 ELSSCASLQTLILSRNK 414
            L++   L+ L LS N+
Sbjct: 399 SLTAL-KLKALWLSDNQ 414



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L  L
Sbjct: 84  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRL 143

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 144 PKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELD 203

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N + +L  S+      ALL                                 K+L L
Sbjct: 204 LGNNEIHSLPESI-----GALLCL-------------------------------KDLWL 227

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 228 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 286

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 287 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 343

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  L  N L  IP      T L  LDL+ N +  LP  L ++
Sbjct: 344 RNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTAL 403



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LD+SRN I E+P  +S C +LQ    S N + 
Sbjct: 82  VKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLM 141

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P +    L +L+CL +++  L+ +P                       D    +  L+
Sbjct: 142 RLPKS-FPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLE 200

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N I SLPE+    +L  L++L+L   QL E P +I  L+ L  LD+S+N L+ +
Sbjct: 201 ELDLGNNEIHSLPES--IGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL 258

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  +P
Sbjct: 259 PEEISGLTSLTDLVISQNLLETIP 282



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 5/167 (2%)

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           + ++  ++ KL LS N IQ LPPE+++   L  L +SRN I + P++I +   +L     
Sbjct: 77  QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESI-SFCKALQIADF 135

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             NPL ++P   F ++  L  L ++  ++ SLPEN    +L +L  L LR   L   P  
Sbjct: 136 SGNPLMRLPK-SFPELENLTCLSVNDVSLQSLPEN--IGNLYNLTSLELRENLLTYLPDS 192

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + +L++L  LDL  N + S+PE    L  L +L L  N +S LP E+
Sbjct: 193 LTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEI 239


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 101 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 160

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 161 IPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSIL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 221 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 280 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTLKLKALWLSDN 339

Query: 286 S 286
            
Sbjct: 340 Q 340



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 41/376 (10%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 63

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 123

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 124 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 182

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLS 278
            +P  I+G  SL +  +  N L  LP  +GKL KL  L +  N+L +    +  C+  L+
Sbjct: 183 CLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCE-SLT 241

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L+ N L  LP  IGK+  L  L                                N D
Sbjct: 242 ELVLTENQLQILPKSIGKLKKLNNL--------------------------------NAD 269

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
               T+    I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  
Sbjct: 270 RNKLTSLPKEIGGCCSLNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPIS 325

Query: 399 LSSCASLQTLILSRNK 414
           L++   L+ L LS N+
Sbjct: 326 LTT-LKLKALWLSDNQ 340



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LDL +N I  IP SIS C +L       N L+ L
Sbjct: 10  LRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRL 69

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P    +L  L                 C   LSV D+S   L  LP  IG +  L  L L
Sbjct: 70  PESFPELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLEL 107

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
             N L  L  SL      A L+ L    L  NE      T   L  +        K+L L
Sbjct: 108 RENLLTYLPESL------AQLQRLEELDLGNNELYHLPETIGALFNL--------KDLWL 153

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  L+ IP E+     +  LD+S N ++ LP E++   SL  L++S+N ++  PD I  
Sbjct: 154 DGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGI-G 212

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+ +D   D   L  L L+ N +  LP++     L  L  L   
Sbjct: 213 KLRKLSILKVDQNKLIQL-TDSIGDCESLTELVLTENQLQILPKS--IGKLKKLNNLNAD 269

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N ++ LP  L ++
Sbjct: 270 RNKLTSLPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL 329



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LDLSRN I E+P  +S C +LQ    S N + 
Sbjct: 8   VKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLT 67

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       +    +  L+
Sbjct: 68  RLPES-FPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLE 126

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N +  LPE     +L +L++L+L   QL E P ++  L+ L  LD+S+N L+ +
Sbjct: 127 ELDLGNNELYHLPET--IGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECL 184

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  LP
Sbjct: 185 PEEINGLTSLTDLLVSQNLLQVLP 208



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 46/95 (48%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   +   L +L+L  N ++ L + +  L  L  LN   NKL+ LP  IG    L    V
Sbjct: 232 DSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 291

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             N + +IP EI  AT L   D + N+L  LP SL
Sbjct: 292 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPISL 326



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 51/169 (30%)

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
            ++  ++ KL LS N IQ LPPE+++   L  L LSRN I + P++I       S  K  
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESI-------SFCK-- 54

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
                            LQ+ D S N +  LPE+ P                        
Sbjct: 55  ----------------ALQVADFSGNPLTRLPESFP------------------------ 74

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             LQ L  L ++  SLQ++PE   NL +L  L+L +N ++ LP  L  +
Sbjct: 75  -ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQL 122



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
           PF  L  L++L L   +++  P +I    QL  LDLS+N +  IPE      +L   D S
Sbjct: 3   PFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFS 62

Query: 530 DNNISALP---PEL 540
            N ++ LP   PEL
Sbjct: 63  GNPLTRLPESFPEL 76


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 141/274 (51%), Gaps = 4/274 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 54  LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYL 113

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L + D  +N+L  LP ++G   NL D     N +T +P+++ +   +  LD
Sbjct: 114 PESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLD 173

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL  L    I+  T LT+L+ S+NLL  +P+ IG L RL  L + QN+++ +  SI
Sbjct: 174 VSENKLECLPEE-ISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSI 232

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C SL E  +  N L +LP  +G+L KL  L+   N+L     E   C   L+V  + +
Sbjct: 233 GDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGC-CSLNVFSVRD 291

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N LS +P EI +   L  L + GN L  L  SL 
Sbjct: 292 NRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLT 325



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 135/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 99  NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLTE 158

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    ++S L
Sbjct: 159 IPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSIL 218

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 219 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKE 277

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 278 IGGCCSLNVFSVRDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLTTLKLKALWLSDN 337



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 180/374 (48%), Gaps = 37/374 (9%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 2   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSG 61

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 62  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 121

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 122 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLE 180

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
            +P  ISG  SL +  +  N L  LP  +GKL                       RLS+L
Sbjct: 181 CLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLR----------------------RLSIL 218

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            +  N L  L   IG   +L +L+LT N L++L  S+        LK L +    N D  
Sbjct: 219 KVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSI------GRLKKLNNL---NADRN 269

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             T+    I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  L+
Sbjct: 270 KLTSLPKEIGGCCSLNV----FSVRDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLT 325

Query: 401 SCASLQTLILSRNK 414
           +   L+ L LS N+
Sbjct: 326 T-LKLKALWLSDNQ 338



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 152/356 (42%), Gaps = 63/356 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LDL +N I  IP SIS C +L       N L+ L
Sbjct: 8   LRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPLTRL 67

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P    +L  L                 C   LSV D+S   L  LP  IG +  L  L L
Sbjct: 68  PESFPELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLEL 105

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
             N L  L  SL      A L+ L    L  NE      T   L  +        K+L L
Sbjct: 106 RENLLTYLPESL------AQLQRLEELDLGNNELYHLPETIGALFNL--------KDLWL 151

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  L+ IP E+     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 152 DGNQLTEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGI-G 210

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L  LS LK+D N L Q+ +D   D                           L EL L  
Sbjct: 211 KLRRLSILKVDQNKLIQL-TDSIGDC------------------------ESLTELVLTE 245

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QL+  P  I RL++L  L+  +N L S+P+      SL    + DN +S +P E+
Sbjct: 246 NQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRIPSEI 301



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LDLSRN I E+P  +S C +LQ    S N + 
Sbjct: 6   VKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPLT 65

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       +    +  L+
Sbjct: 66  RLPES-FPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLE 124

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N +  LPE     +L +L++L+L   QL E P ++  L+ L  LD+S+N L+ +
Sbjct: 125 ELDLGNNELYHLPET--IGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECL 182

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  LP
Sbjct: 183 PEEISGLTSLTDLLVSQNLLQVLP 206



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 15/253 (5%)

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--- 352
           ++  LRKL L+ N ++ L   + N      L   R+ +PE  +S +      +   +   
Sbjct: 4   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNP 63

Query: 353 -TRLSVTSKE------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            TRL  +  E      LS+  ++L A+P  I     +  L+L  N +  LP  L+    L
Sbjct: 64  LTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRL 123

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L L  N++   P+ I  +L +L  L LD N L ++P +   ++  L  LD+S N +  
Sbjct: 124 EELDLGNNELYHLPETI-GALFNLKDLWLDGNQLTEIPQE-VGNLKNLLCLDVSENKLEC 181

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LPE    S L  L +L + +  L+  P  I +L++L IL + QN L  + +   +  SLT
Sbjct: 182 LPEE--ISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLT 239

Query: 525 ELDLSDNNISALP 537
           EL L++N + +LP
Sbjct: 240 ELVLTENQLQSLP 252



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 45/95 (47%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   +   L +L+L  N ++ L + +  L  L  LN   NKL+ LP  IG    L    V
Sbjct: 230 DSIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 289

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             N + +IP EI  A  L   D + N+L  LP SL
Sbjct: 290 RDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSL 324



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
           PF  L  L++L L   +++  P +I    QL  LDLS+N +  IPE      +L   D S
Sbjct: 1   PFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFS 60

Query: 530 DNNISALP---PEL 540
            N ++ LP   PEL
Sbjct: 61  GNPLTRLPESFPEL 74


>gi|256072891|ref|XP_002572767.1| shoc2 [Schistosoma mansoni]
 gi|360043065|emb|CCD78477.1| putative shoc2 [Schistosoma mansoni]
          Length = 532

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 161/328 (49%), Gaps = 41/328 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ +  L ++P  VYK               +L  L L  N I  + E+++ L  L VL
Sbjct: 177 LDIRHNKLCEIPQVVYK-------------LHNLTHLFLRFNRIRVVDEEIKYLTKLQVL 223

Query: 74  NVSHNKLSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           ++  NK+  LPA   IG+L  L +LDVS N + ++ ++IG    L       N+L+ LP+
Sbjct: 224 SLRENKIHTLPADPGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPN 283

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           ++G    L +     N + SLP+ LA C+ + +L++EGN +  L   L+     ++ +  
Sbjct: 284 TIGDLKMLENIGLKYNHLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTL 343

Query: 192 SKNLLN----GMPETIGSL---------------------SRLIRLDLHQNRILSIPSSI 226
           S+N  N    G P+   S+                     S L +L++  N+I + P  I
Sbjct: 344 SRNYFNIFPSGGPQQFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDI 403

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  +G N L+ LP ++  L  L  L L +NQLK+  V   +L +L VLDL  N
Sbjct: 404 KSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEEN 463

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LPP+IG +  L++L++  N L +L
Sbjct: 464 HLESLPPDIGYLGELQRLVVQSNRLTSL 491



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 208/480 (43%), Gaps = 99/480 (20%)

Query: 71  TVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           T L+++  +L  LP +I ++ H LK L +  N ++ +P+EIG+  AL             
Sbjct: 105 TRLDLTKGQLHFLPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFAL------------- 151

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
                            N ++ LPE LA C+++  LD+  NKL                 
Sbjct: 152 ----------EILMVQENSLSDLPETLAQCTQLRVLDIRHNKLC---------------- 185

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE- 248
                    +P+ +  L  L  L L  NRI  +   I     L    +  N +  LPA+ 
Sbjct: 186 --------EIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLRENKIHTLPADP 237

Query: 249 -LGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            +G+L+ L TLD+  N L++    +  CQ +L  L L +N L  LP  IG +  L  + L
Sbjct: 238 GIGQLTNLITLDVSHNHLEQLSEKIGHCQ-KLCTLSLQHNELRSLPNTIGDLKMLENIGL 296

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L +                    LP            D + + T L     EL++E
Sbjct: 297 KYNHLES--------------------LP------------DSLALCTNLL----ELNIE 320

Query: 366 GMNLSAIPSEIW-EAGEITKLDLSRNSIQELP---PELSSCASLQTLILSRNKIKDWPDA 421
           G N+  +P  +     +++ + LSRN     P   P+     S+Q+L +  N+I   P  
Sbjct: 321 GNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQ--QFTSIQSLNMEYNQITRIPFG 378

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
           I +  S+L+ L + +N +   P D  K    L  L++  N +  LP++  +  L +L+ L
Sbjct: 379 IFSRASNLTKLNMKDNQIGAFPPD-IKSWTSLVELNVGTNQLTKLPDDIEY--LINLEVL 435

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L   QL++ P  I  LQ+L++LDL +N L+S+P     L  L  L +  N +++LP E+
Sbjct: 436 ILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLTSLPREI 495



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 26/207 (12%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           KEL L    L  +P+EI     +  L +  NS+ +LP  L+ C  L+ L +  NK+ + P
Sbjct: 129 KELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPETLAQCTQLRVLDIRHNKLCEIP 188

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP--- 475
             +   L +L+ L L  N +R V  +  K +  LQ+L L  N I +LP +P    L    
Sbjct: 189 QVVY-KLHNLTHLFLRFNRIRVVDEE-IKYLTKLQVLSLRENKIHTLPADPGIGQLTNLI 246

Query: 476 -------HLQELY-------------LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                  HL++L              L+  +LR  P  I  L+ L  + L  N L+S+P+
Sbjct: 247 TLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTIGDLKMLENIGLKYNHLESLPD 306

Query: 516 GFKNLTSLTELDLSDNNISALPPELVS 542
                T+L EL++  NNI  LP  L++
Sbjct: 307 SLALCTNLLELNIEGNNIWQLPEGLLT 333



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           W   V+L    +  N + KL +D+  L  L VL +S+N+L ++P  I EL  L+ LD+  
Sbjct: 406 WTSLVELN---VGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEE 462

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P +IG    L +    SN+L  LP  +GR  NL       N + S+P ++   S
Sbjct: 463 NHLESLPPDIGYLGELQRLVVQSNRLTSLPREIGRLYNLIYLAVGENELQSIPNEIVSTS 522



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 25/169 (14%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT LN+  N++   P  I     L  L+V  N + K+PD+I     L     S+NQLK++
Sbjct: 386 LTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQI 445

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++     L       N + SLP D+    ++ +L V+ N+LT                
Sbjct: 446 PVTIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLT---------------- 489

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYM 237
                    +P  IG L  LI L + +N + SIP+ I S    L + Y+
Sbjct: 490 --------SLPREIGRLYNLIYLAVGENELQSIPNEIVSTSTGLFQSYI 530



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +  A +L KL +  N I     D+++   L  LNV  N+L++LP  I  L  L+ L +S 
Sbjct: 380 FSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSN 439

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + +IP  I     L   D   N L+ LP  +G    L      +N +TSLP ++    
Sbjct: 440 NQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLTSLPREIGRLY 499

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            +  L V  N+L  + N ++++ T L +
Sbjct: 500 NLIYLAVGENELQSIPNEIVSTSTGLFQ 527


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD   N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDFSKNNIEMVEEGISACE-NLQDLILSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLNGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            S+N+I+ +   +S+C +LQ LILS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 FSKNNIEMVEEGISACENLQDLILSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   + + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +LI S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LD S N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLP 269


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 159/345 (46%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L       N +T+LP+++    K+  L +  N+LT L    I     L  L  
Sbjct: 113 EIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLNL 171

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N +  +P+ I  L +L  L L  N++ ++P  I    +L   Y+GNN L+  P E+ +
Sbjct: 172 SYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQ 231

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L+ NQL     E  QL+ L +LDLS N L  LP EI ++  L++L L  N L
Sbjct: 232 LKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQL 291

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +                            E L  + T        L L    L+
Sbjct: 292 TVLPKEI----------------------------EQLKNLQT--------LYLGYNQLT 315

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L+ N +  LP E+    +LQ L L+ N++
Sbjct: 316 VLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 360



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 141/299 (47%), Gaps = 38/299 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L  N +  L +++  L  L  
Sbjct: 99  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPKNQLTTLPQEIGQLQKLQW 145

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 146 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKE 205

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL      NN +T+ P+++     +  L +  N+LTVL                 
Sbjct: 206 IEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVL----------------- 248

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ I  L  L  LDL  N++ ++P  I    +L E  +G N L+ LP E+ +L
Sbjct: 249 -------PQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQL 301

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L TL L  NQL     E  QL+ L VL L+NN L+ LP EIG++  L++L L  N L
Sbjct: 302 KNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 360



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 164/348 (47%), Gaps = 39/348 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL     S N I ++
Sbjct: 51  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 110

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+  L +  N+LT L    I     L  L   KN L  +P+ IG L  L  L
Sbjct: 111 PKEIEKLQKLQSLYLPKNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 169

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N+I +IP  I     L    + NN L+ LP E+ +L  L TL L +N+L  +  E 
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEI 229

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L +L L +N L+ LP EI ++  L+ L L+ N L+TL         P  ++ L++
Sbjct: 230 EQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTL---------PKEIEQLKN 280

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL+L    L+ +P EI +   +  L L  N 
Sbjct: 281 ---------------------------LQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQ 313

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +  LP E+    +L+ L L+ N++   P  I   L +L  L L+NN L
Sbjct: 314 LTVLPKEIGQLQNLKVLFLNNNQLTTLPKEI-GQLKNLQELYLNNNQL 360



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 40/357 (11%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S+N+ K LP  +G+  NL +   + N +T LP+++     + KL++  N++  +   
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L   KN L  +P+ IG L +L  L L +N++ ++P  I    +L    + 
Sbjct: 114 -IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N +  +P E+ KL KL +L L +NQL     E  QL+ L  L L NN L+  P EI ++
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQL 232

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L  L         P  +K L++                          
Sbjct: 233 KNLQLLYLYDNQLTVL---------PQEIKQLKN-------------------------- 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             + L L    L  +P EI +   + +L+L  N +  LP E+    +LQTL L  N++  
Sbjct: 258 -LQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTV 316

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 474
            P  I   L +L  L L+NN L  +P +    +  LQ L L+ N  S+ E      L
Sbjct: 317 LPKEI-GQLQNLKVLFLNNNQLTTLPKE-IGQLKNLQELYLNNNQLSIEEKERIQKL 371



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 42/314 (13%)

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
           C   AE +      + L   L    K+ TLDL +N+ K    E  +L+ L  L+L+ N L
Sbjct: 25  CEIQAEEFEQQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQL 84

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + LP EIG++  LRKL L+ N ++T+   +       L K     LP+N+          
Sbjct: 85  TILPKEIGQLKNLRKLNLSANQIKTIPKEI-----EKLQKLQSLYLPKNQ---------- 129

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
                                L+ +P EI +  ++  L L +N +  LP E+    +L++
Sbjct: 130 ---------------------LTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 168

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L LS N+IK  P  I   L  L  L LDNN L  +P +  + +  LQ L L  N + + P
Sbjct: 169 LNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPKE-IEQLKNLQTLYLGNNRLTTFP 226

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +      L +LQ LYL   QL   P +I +L+ L++LDLS N L+++P+  + L +L EL
Sbjct: 227 KE--IEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQEL 284

Query: 527 DLSDNNISALPPEL 540
           +L  N ++ LP E+
Sbjct: 285 NLGYNQLTVLPKEI 298



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD-------KWWEAV-DLQKLILAHNNIEKLKE 62
           SL L N  L  +P E+   KN      G+       K  E + +LQ L L  N +  L +
Sbjct: 191 SLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQ 250

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +++ L  L +L++S+N+L  LP  I +L  L+ L++ +N +  +P EI     L      
Sbjct: 251 EIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLG 310

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            NQL  LP  +G+  NL     +NN +T+LP+++     + +L +  N+L++
Sbjct: 311 YNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSI 362


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L                       
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERL----------------------- 189

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                 L  NE +E     E L  +        KE  ++   L+ IP  I    ++T LD
Sbjct: 190 -----DLGSNEFTEVPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 44/253 (17%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEA-------------VDL 47
           M+R+ +  R    L+L +    +VP EV +    +G  + W +A               L
Sbjct: 180 MNRLTQLER----LDLGSNEFTEVP-EVLEQL--SGLKEFWMDANRLTFIPGFIGSLKQL 232

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
             L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N +M +P
Sbjct: 233 TYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLP 292

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D IG   ++ + DCS N+++ LPSS+G+  NL  F A +N +  LP +            
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPE------------ 340

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       I SW  +T L    N L  +PE +G + +L  ++L  NR+ ++P S +
Sbjct: 341 ------------IGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388

Query: 228 GCCSLAEFYMGNN 240
               L   ++ +N
Sbjct: 389 KLQQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIE 243

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +
Sbjct: 244 MVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEE 303

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD   N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P 
Sbjct: 304 LDCSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPE 362

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +     L    + +N L  LP    KL +L  + L  NQ
Sbjct: 363 EMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 20/242 (8%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLP 475
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P  F  L 
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPANFGRLT 161

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++ 
Sbjct: 162 KLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF 221

Query: 536 LP 537
           +P
Sbjct: 222 IP 223



 Score = 42.0 bits (97), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+ + +  L L  N +E L E++ ++  L V+N+S N+L  LP +  +L  L ++ +S N
Sbjct: 344 WKNITV--LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-CLNLSDFKASNNCITSLP 153
             M       + T +  F C S+  ++L  S G   L+++D + S   I  +P
Sbjct: 402 QSMLSRSFNSNFTTVSSFHCGSS--RDLHGSQGSLALSVADRRGSGGHIFRMP 452


>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 319

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 25/260 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL     S N +T+LP+++     +  LD++ N+
Sbjct: 115 RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            T+L                        P+ IG L  L  L+L  N++ ++P  I    +
Sbjct: 175 FTIL------------------------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L NN L+ L
Sbjct: 211 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 270

Query: 291 PPEIGKMTTLRKLLLTGNPL 310
           P EIG++  L+ L L  NPL
Sbjct: 271 PKEIGQLQNLQDLELLMNPL 290



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 144/322 (44%), Gaps = 47/322 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++ + P  I    +L + ++  N L+ALP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L TLDL +NQ      E  QL+ L  L+L +N L+ LP EIG++  L++L L 
Sbjct: 158 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L  L   +        L+ L++   PEN                             
Sbjct: 218 NNRLTVLPKEI------GQLQNLQTLCSPENR---------------------------- 243

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L+A+P E+ +   +  L+L  N +  LP E+    +LQ L L  N +       L  
Sbjct: 244 ---LTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS------LKE 294

Query: 426 LSSLSCLKLDNN-PLRQVPSDG 446
              +  L  D+N  LR+V  DG
Sbjct: 295 RKRIQKLFPDSNLDLREVAEDG 316



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLI---LAHNNIEKLKED 63
           L+LS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL+  P  IG+L  L+ L +S N +  +P EIG    L   D  +
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ   LP  +G+  NL      +N + +LP ++     + +L +  N+LTVL        
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL-------- 224

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG L  L  L   +NR+ ++P  +    +L    + NN L+
Sbjct: 225 ----------------PKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLT 268

Query: 244 ALPAELGKLSKLGTLDLHSN 263
            LP E+G+L  L  L+L  N
Sbjct: 269 VLPKEIGQLQNLQDLELLMN 288



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 41/267 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS  + + LP EI ++  L++L L  N L T  + +V       L+ L S   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVE------LQKLES--- 98

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                      L L    L  +P+EI     + +L L +N +  
Sbjct: 99  ---------------------------LDLSENRLVMLPNEIGRLQNLQELGLYKNKLTT 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
            P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    +  LQ
Sbjct: 132 FPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQLQNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L+ L   +N L ++
Sbjct: 190 TLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTAL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P+    L +L  L+L +N ++ LP E+
Sbjct: 248 PKEMGQLKNLQTLNLVNNRLTVLPKEI 274



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L G N + +P EI +   + +LDL  N +   P  +     L++L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESL 99

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            LS N++   P+ I   L +L  L L  N L   P +    +  LQ L LS N + +LP+
Sbjct: 100 DLSENRLVMLPNEI-GRLQNLQELGLYKNKLTTFPKE-IGQLQNLQKLWLSENRLTALPK 157

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                 L +LQ L L+  Q    P +I +LQ L+ L+L  N L ++P     L +L EL 
Sbjct: 158 E--IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELY 215

Query: 528 LSDNNISALPPEL 540
           L +N ++ LP E+
Sbjct: 216 LRNNRLTVLPKEI 228



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 164 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 224 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 166 DVEGNKLTV 174
           ++  N L++
Sbjct: 284 ELLMNPLSL 292


>gi|355749960|gb|EHH54298.1| Erbb2-interacting protein [Macaca fascicularis]
          Length = 1411

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 155/320 (48%), Gaps = 23/320 (7%)

Query: 2   DRILKAARTSGSL------NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHN 55
           ++IL+     GSL      +L +  L D+P E+ K               +L+ L L  N
Sbjct: 70  NKILRVPPAIGSLIALEELHLEDNELSDLPEELVK-------------CSNLKILDLRLN 116

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            + +L + +  L  LT L +    L++LP  I +L  L+SLDV  N +  +P  I     
Sbjct: 117 LLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKH 176

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L + D   N+L  LP ++G    L D    +N ++++P+ L  C  +  LDV  N LT L
Sbjct: 177 LRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTAL 236

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               I     L EL  ++N +  +P +IG L  L+ L    N +  +  +I  C SL E 
Sbjct: 237 PKE-IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLEL 295

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE 293
           Y+ NN L+ LPA +G L +L  L +  NQL+E    +  C  +LS+L L  N L  LP E
Sbjct: 296 YLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCS-KLSILTLRGNRLRELPLE 354

Query: 294 IGKMTTLRKLLLTGNPLRTL 313
           +G++  LR L L  N L  L
Sbjct: 355 VGRLANLRVLDLCDNILAFL 374



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L   ++ +L  D+  L  L  L+V  N+L  LP AI +L  L+ LD+  N +  +
Sbjct: 131 LTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHL 190

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +GS   L       N L  +P SL  C +L     S N +T+LP+++ D  ++ +L 
Sbjct: 191 PLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELS 250

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N++  L N+ I     L  L A  N L  +  TIG  S L+ L L  N++ ++P++I
Sbjct: 251 IAENRIAALPNS-IGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATI 309

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
            G   L+   +  N L  +P+ +G  SKL  L L  N+L+E  +E  +L  L VLDL +N
Sbjct: 310 GGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDN 369

Query: 286 SLSGLPPEIGKMTTLRKLLLT 306
            L+ LP  I  +  LR L L+
Sbjct: 370 ILAFLPFTINVLFNLRALWLS 390



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S + L EL    N +  +PE +    +L  L L QN+IL +P +I    +L E ++ +N 
Sbjct: 35  SASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNE 94

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           LS LP EL K S L  LDL  N L        +L  L+ L L   SL+ LPP+I ++  L
Sbjct: 95  LSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNL 154

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS 359
           R L +  N LR L       P    LK+LR   L  NE S        L  +        
Sbjct: 155 RSLDVRENQLRIL------PPAICQLKHLRELDLGRNELSHLPLNMGSLEVL-------- 200

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L ++   LSA+P  +   G +  LD+S+N +  LP E+     L  L ++ N+I   P
Sbjct: 201 EDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALP 260

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           ++I   L +L  LK D+N L ++                          P       L E
Sbjct: 261 NSI-GRLKNLVTLKADSNALTELV-------------------------PTIGECSSLLE 294

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL   QL   P  I  L++L +L + +N L+ IP      + L+ L L  N +  LP E
Sbjct: 295 LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLE 354

Query: 540 L 540
           +
Sbjct: 355 V 355



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 172/377 (45%), Gaps = 38/377 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N I ++ E L     L  L++  NK+  +P AIG L  L+ L +  N +  +
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+   + L   D   N L  LP  + R  +L+        +T LP D+     +  LD
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLD 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L +L    I     L EL   +N L+ +P  +GSL  L  L +  N + ++P S+
Sbjct: 159 VRENQLRILP-PAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSL 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           + C  L    +  N L+ALP E+G L +L  L +  N++        +L+ L  L   +N
Sbjct: 218 TSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ L P IG+ ++L +L L  N L TL         PA +  L+               
Sbjct: 278 ALTELVPTIGECSSLLELYLFNNQLTTL---------PATIGGLKE-------------- 314

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                    LSV    LS++   L  IPS I    +++ L L  N ++ELP E+   A+L
Sbjct: 315 ---------LSV----LSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANL 361

Query: 406 QTLILSRNKIKDWPDAI 422
           + L L  N +   P  I
Sbjct: 362 RVLDLCDNILAFLPFTI 378



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQT 407
            T + R+ V  K       NL  +P+E+  +   + +L L  N I E+P  L  C  L++
Sbjct: 9   FTCSGRVDVIEKR----QCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP 466
           L L +NKI   P AI  SL +L  L L++N L  +P +  K    L+ILDL  N+   LP
Sbjct: 65  LSLGQNKILRVPPAI-GSLIALEELHLEDNELSDLPEELVK-CSNLKILDLRLNLLTRLP 122

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +    + L  L  LYL    L + P DI +LQ LR LD+ +N L+ +P     L  L EL
Sbjct: 123 D--VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 527 DLSDNNISALP 537
           DL  N +S LP
Sbjct: 181 DLGRNELSHLP 191



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 401 SCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +C+    +I  R   + + P  +  S S L  L LD N + ++P +G      L+ L L 
Sbjct: 10  TCSGRVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIP-EGLCRCKKLRSLSLG 68

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N I  +P  P   SL  L+EL+L   +L + P ++++   L+ILDL  N L  +P+   
Sbjct: 69  QNKILRVP--PAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVT 126

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L+SLT L L + +++ LPP++
Sbjct: 127 RLSSLTHLYLFETSLTQLPPDI 148



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ELYL   Q+ E P  + R ++LR L L QN +  +P    +L +L EL L DN +S L
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 537 PPELV 541
           P ELV
Sbjct: 99  PEELV 103



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L +L L +N +  L   +  L  L+VL++  N+L E+P+AIG    L  L +  N 
Sbjct: 288 ECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNR 347

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           + ++P E+G    L   D   N L  LP ++    NL
Sbjct: 348 LRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNL 384


>gi|359483612|ref|XP_002272319.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           FLS2-like [Vitis vinifera]
          Length = 1146

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 251/562 (44%), Gaps = 81/562 (14%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           DLQ L L+ N +   +  ++ NL  L  L +  N LS ++P+ +G+   L  L++  N  
Sbjct: 194 DLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSNQF 253

Query: 104 MK-IPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNN-CITSLPEDLADCS 160
              IP E+G+   LV      N+L   +PSSL +   L+    S N  I ++P +L    
Sbjct: 254 TGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSELGSLR 313

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +  L +  NK T      I + T LT L  S N L G +P  IGSL  L  L +H N +
Sbjct: 314 SLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLL 373

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE---ACQ 274
             SIPSSI+ C  L    +  N ++  +P  LG+L  L  L L  N++     +    C 
Sbjct: 374 EGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCS 433

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-- 331
             L++LDL+ N+ SG L P IGK+  L++L       +  ++SLV GP P  +  L    
Sbjct: 434 -NLAILDLARNNFSGVLKPGIGKLYNLQRL-------QAHKNSLV-GPIPPEIGNLTQLF 484

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L  N +S + T   +L  ++    +   + +LEG    AIP EI+E   +++L L  N 
Sbjct: 485 SLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEG----AIPEEIFELKHLSELGLGDNR 540

Query: 392 IQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL-RQVPS----- 444
               +P  +S   SL  L L+ N +     A +  LS L+ L L +N L   +P      
Sbjct: 541 FAGHIPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIAS 600

Query: 445 --------------------DGFKDIPMLQILDLSYN--IASLPEN-------------- 468
                               D    + M+Q++D+S N    S+PE               
Sbjct: 601 MKNMQIYLNFSHNFLSGPIPDEIGKLEMVQVVDMSNNNLSGSIPETLQGCRNLFNLDLSV 660

Query: 469 ---------PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGF 517
                      F+ +  L  L L R  L    P  +  ++ L  LDLSQN  +  IPE +
Sbjct: 661 NELSGPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESY 720

Query: 518 KNLTSLTELDLSDNNISALPPE 539
            N+++L +L+LS N +    PE
Sbjct: 721 ANISTLKQLNLSFNQLEGRVPE 742



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 247/580 (42%), Gaps = 83/580 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL + + +L+   N V    D  G    W EA         H N   +  DL +  +++V
Sbjct: 4   SLEVEHEALKAFKNSVAD--DPFGALADWSEANH-------HCNWSGITCDLSSNHVISV 54

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQLK-ELP 130
             +      ++   +G + +L+ LD+S NS    IP ++G  + L++ +   N L   +P
Sbjct: 55  SLMEKQLAGQISPFLGNISILQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIP 114

Query: 131 SSLGRCLNLSDFKASNNCI-TSLPEDLADCSKMSKLDVEGNKLT---------------- 173
             LG   NL      +N +  S+P+ + +C+ +  L +  N LT                
Sbjct: 115 PELGNLRNLQSLDLGSNFLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQIL 174

Query: 174 -VLSNNLIASWTM-------LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IP 223
            + SNN+I    +       L  L  S N L+G MP  IG+LS L  L L +N +   IP
Sbjct: 175 VLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIP 234

Query: 224 SSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR-LSVL 280
           S +  C  L    + +N  +  +P+ELG L +L  L L+ N+L      +  QL+ L+ L
Sbjct: 235 SELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHL 294

Query: 281 DLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL------------- 326
            +S N L G +P E+G + +L+ L        TL S+   G  PA +             
Sbjct: 295 GISENELIGTIPSELGSLRSLQVL--------TLHSNKFTGKIPAQITNLTNLTILSMSF 346

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
            +L   LP N  S  +      +T+   L        LEG    +IPS I     +  + 
Sbjct: 347 NFLTGELPSNIGSLHNLKN---LTVHNNL--------LEG----SIPSSITNCTHLVNIG 391

Query: 387 LSRNSIQ-ELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L+ N I  E+P  L    +L  L L  NK+  + PD +    S+L+ L L  N    V  
Sbjct: 392 LAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNC-SNLAILDLARNNFSGVLK 450

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRIL 503
            G   +  LQ L    N    P  P   +L  L  L L    L    P ++ +L  L+ L
Sbjct: 451 PGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQGL 510

Query: 504 DLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            L  N+L+ +IPE    L  L+EL L DN  +   P  VS
Sbjct: 511 YLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVS 550



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 248/583 (42%), Gaps = 124/583 (21%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +LQ L L  N +E  + + + N   L  L +  N L+  +P  IG L  L+ L +  N+I
Sbjct: 122 NLQSLDLGSNFLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNI 181

Query: 104 MK-IPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
           +  IP  IG    L   D S NQL   +P  +G   NL   +   N ++  +P +L  C 
Sbjct: 182 IGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCK 241

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           K+  L++  N+ T                        G+P  +G+L +L+ L L++NR+ 
Sbjct: 242 KLIYLNLYSNQFT-----------------------GGIPSELGNLVQLVALKLYKNRLN 278

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQL-KEYCVEACQL-R 276
           S IPSS+     L    +  N L   +P+ELG L  L  L LHSN+   +   +   L  
Sbjct: 279 STIPSSLFQLKYLTHLGISENELIGTIPSELGSLRSLQVLTLHSNKFTGKIPAQITNLTN 338

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L++L +S N L+G LP  IG +  L+ L        T+ ++L+ G  P+ +    + L  
Sbjct: 339 LTILSMSFNFLTGELPSNIGSLHNLKNL--------TVHNNLLEGSIPSSITNC-THLVN 389

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS---- 391
              +    T E    +    ++T   L +  M+   IP +++    +  LDL+RN+    
Sbjct: 390 IGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMS-GNIPDDLFNCSNLAILDLARNNFSGV 448

Query: 392 ---------------------IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
                                +  +PPE+ +   L +L L+ N +       L+ LS L 
Sbjct: 449 LKPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQ 508

Query: 431 CLKLDNNPLR-QVPSDGFK----------------DIPM--------------------- 452
            L LD+N L   +P + F+                 IP                      
Sbjct: 509 GLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLESLLNLYLNGNVLNGS 568

Query: 453 ----------LQILDLSYN--IASLPENPPFSSLPHLQELYL---RRMQLREAPTDILRL 497
                     L ILDLS+N  + S+P  P  +S+ ++Q +YL           P +I +L
Sbjct: 569 IPASMARLSRLAILDLSHNHLVGSIP-GPVIASMKNMQ-IYLNFSHNFLSGPIPDEIGKL 626

Query: 498 QQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPE 539
           + ++++D+S N+L  SIPE  +   +L  LDLS N +S   PE
Sbjct: 627 EMVQVVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELSGPVPE 669



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 43/334 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN--IEKLKEDLRNLPLLT 71
            N SN ++ D+    +    + G G  +    +LQ+L  AH N  +  +  ++ NL  L 
Sbjct: 430 FNCSNLAILDLARNNFSGVLKPGIGKLY----NLQRL-QAHKNSLVGPIPPEIGNLTQLF 484

Query: 72  VLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK-E 128
            L ++ N LS  +P  + +L +L+ L +  N++   IP+EI     L +     N+    
Sbjct: 485 SLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGH 544

Query: 129 LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLT-VLSNNLIASW-TM 185
           +P ++ +  +L +   + N +  S+P  +A  S+++ LD+  N L   +   +IAS   M
Sbjct: 545 IPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIASMKNM 604

Query: 186 LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 243
              L  S N L+G +P+ IG L  +  +D+  N +  SIP ++ GC +L    +  N LS
Sbjct: 605 QIYLNFSHNFLSGPIPDEIGKLEMVQVVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELS 664

Query: 244 A--------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--L 275
                                      LP  L  +  L +LDL  N+ K    E+     
Sbjct: 665 GPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESYANIS 724

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L  L+LS N L G  PE G    +    L GNP
Sbjct: 725 TLKQLNLSFNQLEGRVPETGIFKNVSASSLVGNP 758


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L                      LP               
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL--------------------PELPRE------------- 345

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
            + +R +VT   +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 346 -IGSRKNVTV--MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 197/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSRKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I    ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  SL+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTSLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  L
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+N++  LP  IG +  L  L +  
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCE-SLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+  G   A+           ED + S  +                      
Sbjct: 286 NQLMYLPDSI--GGLTAI-----------EDLDCSFNE---------------------- 310

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I    +I       N + +LPPE+ +  S   L L  NK++  P+  +  + 
Sbjct: 311 -IEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N LR +P
Sbjct: 369 KLKVINLSDNRLRNLP 384



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 199/457 (43%), Gaps = 98/457 (21%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + SLD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTILPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  +    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNKLTYIPGFLGNLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ-----LREAPTDILRLQQL 500
              +  ++ LD S+N I +LP     SS+ HL  + +R        L + P +I   +  
Sbjct: 295 IGGLTAIEDLDCSFNEIEALP-----SSIGHL--IQIRTFAADHNFLTQLPPEIGTWKSA 347

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +L L  N L+S+PE   ++  L  ++LSDN +  LP
Sbjct: 348 TVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLP 384



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 24/194 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE +++ +     L  L +S N + +LP +IG L  L +L V  N +M +
Sbjct: 232 LTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG  TA+   DCS N+++ LPSS+G  + +  F A +N +T LP +           
Sbjct: 292 PDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W   T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 227 SGCCSLAEFYMGNN 240
           +    L   ++ +N
Sbjct: 388 TRLQQLTAMWLSDN 401



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 20/242 (8%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLP 475
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P  F  L 
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPANFGRLT 161

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++ 
Sbjct: 162 KLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY 221

Query: 536 LP 537
           +P
Sbjct: 222 IP 223


>gi|380814690|gb|AFE79219.1| protein LAP2 isoform 2 [Macaca mulatta]
 gi|383419995|gb|AFH33211.1| protein LAP2 isoform 2 [Macaca mulatta]
          Length = 1370

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|293357166|ref|XP_002729094.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like, partial [Rattus norvegicus]
          Length = 590

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 209/474 (44%), Gaps = 69/474 (14%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           +D S  ++  IP EI +   L +    +NQ+ E+P  +     +      NN + +L ++
Sbjct: 60  IDGSNQNLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQE 119

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASW----------TMLTE--------------LIA 191
           L   S +  LD+ GN L + S  +I             T LTE              L  
Sbjct: 120 LGSLSNLESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGL 179

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ I + ++L  + L QN   + P  +   C+L    + +N L  +P ++G 
Sbjct: 180 SENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDNKLKTIPEDIGH 239

Query: 252 LSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L +L    + SN L      +  C+ +LSVLDL++NS+  LP  + ++T L ++ L+GN 
Sbjct: 240 LVRLQKFYVASNHLMGLPESLSHCR-KLSVLDLTHNSIHSLPYSLEQLTELTEVGLSGNR 298

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L  +   L N  +  LL YLR+                               SL G+  
Sbjct: 299 LEKVPRLLCNWVSLHLL-YLRNT------------------------------SLHGLRR 327

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           S           +  LDLS+N I   P ++ +   L+ L L  NK+K  P AI +SLS L
Sbjct: 328 S-----FKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILALDDNKVKQLPPAI-SSLSKL 381

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPHLQELYLRRMQ 486
             L L  N     P + F  + + ++    D    ++SLPEN     L +L+ELY+   Q
Sbjct: 382 KILGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSKLSSLPEN--IKKLTNLKELYIENNQ 439

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L + P  +  +  L +LD   N L+ +P+       L EL L DN +S LP  L
Sbjct: 440 LEQLPASLGLMPNLEVLDCRHNLLRQLPDAICQTRDLRELLLEDNLLSRLPENL 493



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 179/429 (41%), Gaps = 53/429 (12%)

Query: 18  NRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSH 77
           N  L +VP+ + K+               L+ L L+ N +E L +++ N   L  + +  
Sbjct: 157 NTGLTEVPSGICKSLHH------------LELLGLSENYLESLPKEIVNQTKLREIYLKQ 204

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N     P  +  L  L+ +D+  N +  IP++IG    L KF  +SN L  LP SL  C 
Sbjct: 205 NHFENFPCDLCVLCNLEVIDLDDNKLKTIPEDIGHLVRLQKFYVASNHLMGLPESLSHCR 264

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
            LS    ++N I SLP  L   ++++++ + GN+L  +   L+ +W  L  L      L+
Sbjct: 265 KLSVLDLTHNSIHSLPYSLEQLTELTEVGLSGNRLEKVP-RLLCNWVSLHLLYLRNTSLH 323

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           G+  +   L  L  LDL QN I   P  I     L    + +N +  LP  +  LSKL  
Sbjct: 324 GLRRSFKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILALDDNKVKQLPPAISSLSKLKI 383

Query: 258 LDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L L  N    +  E   L    +L +     + LS LP  I K+T L++L +  N L  L
Sbjct: 384 LGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSKLSSLPENIKKLTNLKELYIENNQLEQL 443

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            +SL  G  P L              E    + +L                    L  +P
Sbjct: 444 PASL--GLMPNL--------------EVLDCRHNL--------------------LRQLP 467

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I +  ++ +L L  N +  LP  L    +L+ L L+ N ++D P  +    +      
Sbjct: 468 DAICQTRDLRELLLEDNLLSRLPENLDHLVNLKVLTLTDNLMEDPPMEVCEQGNEAIWRH 527

Query: 434 LDNNPLRQV 442
           L  N +R+V
Sbjct: 528 LKENRIRKV 536



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 143/351 (40%), Gaps = 42/351 (11%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  I +L  L  + L  N+I  IP  I     +   Y+ NN+L  L  ELG LS L
Sbjct: 67  LKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQELGSLSNL 126

Query: 256 GTLDLHSN--QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRT 312
            +LDL  N   L    V      L  L L N  L+ +P  I K +  L  L L+ N L +
Sbjct: 127 ESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGLSENYLES 186

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   +VN  T     YL+    EN   +        + +   L V    + L+   L  I
Sbjct: 187 LPKEIVNQ-TKLREIYLKQNHFENFPCD--------LCVLCNLEV----IDLDDNKLKTI 233

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P +I     + K  ++ N +  LP  LS C  L  L L+ N I   P + L  L+ L+ +
Sbjct: 234 PEDIGHLVRLQKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYS-LEQLTELTEV 292

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L  N L +VP              L  N  SL          HL  LYLR   L     
Sbjct: 293 GLSGNRLEKVPR-------------LLCNWVSL----------HL--LYLRNTSLHGLRR 327

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
               L  LR LDLSQN +   P     L  L  L L DN +  LPP + S+
Sbjct: 328 SFKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILALDDNKVKQLPPAISSL 378


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 192/404 (47%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N    LP E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 180/388 (46%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N L
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEL 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  + L   ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 190/417 (45%), Gaps = 68/417 (16%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM- 185
           K L  +L    ++ +   S   + +LP  +     + KLD+ GN+ T+LS  +   W + 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEI---WQLK 87

Query: 186 -LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L +L  + N L  +P+ IG L  L  L LH N ++++P  I    +L +  + NN L+ 
Sbjct: 88  DLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTV 147

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L SN+L     E  QL+ L  LDL++N L+ +  E+  + TL  L
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENL 207

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+T+         P  ++ L+S                            K L 
Sbjct: 208 DLRSNKLKTI---------PKEIRQLKSL---------------------------KVLM 231

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L G  L+++P EI +   +  L+L  N  Q LP E+    +L  L L  N++ ++P  + 
Sbjct: 232 LTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEV- 290

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
             L SL  L L +N +  +P +                          + LP LQEL+L 
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVE-------------------------VTQLPDLQELHLS 325

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             ++   P +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL+ N ++ +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|183233672|ref|XP_652025.2| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801462|gb|EAL46639.2| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
          Length = 850

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
            +++++LT L    N +N  P+ I  L  L  LDL  N I SIP +I    +L+E  MG 
Sbjct: 46  FSNFSLLTLLRLRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQ 105

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP E+G ++ L  + L +N LKE  +E C L +L+ +DLSNN+    P  +GK++
Sbjct: 106 NNLTSLPKEIGIMTTLVNITLPANNLKELPLEICSLTKLTFVDLSNNNFDNFPQVLGKLS 165

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 357
            +R L +  N L  L+   + G     +K+L   +L  N+ ++      +L  + +    
Sbjct: 166 NIRTLWMFYNNLNKLKG--IEG-----IKHLNQLKLLHNKFTQIPKQIFNLTELCS---- 214

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               L L+   +  IP EI E  ++ ++  +   IQ +P E+ S ++LQ L++ R+++ +
Sbjct: 215 ----LELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNE 270

Query: 418 WP---------------DAILTSLSSL---SCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +P               D+++T +S      C+ L+NN L ++     K  P   +  L+
Sbjct: 271 FPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI-----KCTPNDNVFTLN 325

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                L + P  + L  + ELYL    +++     L    L+IL L+ N L S PE   +
Sbjct: 326 LCNNHLKKIPNTTDLQTIHELYLTNNFIQQIEQTELH-SNLKILTLASNKLTSFPEKGIS 384

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
              L EL+LS+N IS LP  L + 
Sbjct: 385 YNKLKELNLSNNGISQLPNNLFTF 408



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 222/489 (45%), Gaps = 52/489 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  NNI K  + + +L  L  L++S+N ++ +P  I  L+ L  L +  N++  +P EIG
Sbjct: 57  LRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQNNLTSLPKEIG 116

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             T LV     +N LKELP  +     L+    SNN   + P+ L   S +  L +  N 
Sbjct: 117 IMTTLVNITLPANNLKELPLEICSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNN 176

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I     L +L    N    +P+ I +L+ L  L+L  N I  IP  I     
Sbjct: 177 LNKLKG--IEGIKHLNQLKLLHNKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKK 234

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
           L E    +  +  +P E+  LS L  L +  +++ E+                      P
Sbjct: 235 LKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNEF----------------------P 272

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             + KM  +  L++T + +  +  +L N             L  N+ +E   T  D +  
Sbjct: 273 RFLRKMPKISNLIITDSLITEVSCTLNNCCI---------ILENNKLTEIKCTPNDNVFT 323

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL-PPELSSCASLQTLIL 410
                     L+L   +L  IP+   +   I +L L+ N IQ++   EL S  +L+ L L
Sbjct: 324 ----------LNLCNNHLKKIPNT-TDLQTIHELYLTNNFIQQIEQTELHS--NLKILTL 370

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           + NK+  +P+  + S + L  L L NN + Q+P++ F  +P L+IL L  N + ++P + 
Sbjct: 371 ASNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNLFTFLPYLKILKLGINQLTTIPTS- 428

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L  L+EL L   +L E P +IL+L  L  L L+ N +  +P+    L +L  +D S
Sbjct: 429 -LGILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNLSQLNNLQVVDFS 487

Query: 530 DNN-ISALP 537
            NN ISALP
Sbjct: 488 SNNIISALP 496



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 208/466 (44%), Gaps = 39/466 (8%)

Query: 106 IPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP+EI     +L   D S NQ+  +  S      L+  +   N I   P+ + D   +  
Sbjct: 18  IPNEIMKLKHSLKSLDLSLNQINSIEPSFSNFSLLTLLRLRGNNINKFPDPILDLQSLKC 77

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N +T +  N++     L+ELI  +N L  +P+ IG ++ L+ + L  N +  +P 
Sbjct: 78  LDLSNNHITSIPPNIVC-LNNLSELIMGQNNLTSLPKEIGIMTTLVNITLPANNLKELPL 136

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------------HSNQLKEYC 269
            I     L    + NN     P  LGKLS + TL +               H NQLK   
Sbjct: 137 EICSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNNLNKLKGIEGIKHLNQLKLLH 196

Query: 270 VEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
            +  Q+         L  L+L NN +  +PPEI ++  L+++  T   ++ +   +V+  
Sbjct: 197 NKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLS 256

Query: 322 TPALLKYLRSRLPENEDSEASTTK-EDLI---TMATRLSVTSKE--LSLEGMNLSAIPSE 375
               L  +RSR+ E         K  +LI   ++ T +S T     + LE   L+ I  +
Sbjct: 257 NLQELVIVRSRVNEFPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI--K 314

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
                 +  L+L  N ++++P   +   ++  L L+ N I+      L S  +L  L L 
Sbjct: 315 CTPNDNVFTLNLCNNHLKKIP-NTTDLQTIHELYLTNNFIQQIEQTELHS--NLKILTLA 371

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           +N L   P  G      L+ L+LS N I+ LP N  F+ LP+L+ L L   QL   PT +
Sbjct: 372 SNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNL-FTFLPYLKILKLGINQLTTIPTSL 429

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L QL  L+LS N L   P     LTSLT L L+ N I  LP  L
Sbjct: 430 GILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNL 475



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 29/280 (10%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL L N  +R +P E+   K   E    D   + +        +LQ+L++  + + +   
Sbjct: 214 SLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNEFPR 273

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHML-----------------KSLDVSFNSIMK 105
            LR +P ++ L ++ + ++E+   +    ++                  +L++  N + K
Sbjct: 274 FLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEIKCTPNDNVFTLNLCNNHLKK 333

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+     T + +   ++N ++++  +     NL     ++N +TS PE     +K+ +L
Sbjct: 334 IPNTTDLQT-IHELYLTNNFIQQIEQTELHS-NLKILTLASNKLTSFPEKGISYNKLKEL 391

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N ++ L NNL      L  L    N L  +P ++G L++L  L+L  N++   P +
Sbjct: 392 NLSNNGISQLPNNLFTFLPYLKILKLGINQLTTIPTSLGILNQLEELNLSHNKLTEFPLN 451

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    SL   Y+ +N +  LP  L +L+ L  +D  SN +
Sbjct: 452 ILKLTSLTNLYLTHNYICDLPKNLSQLNNLQVVDFSSNNI 491


>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
 gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
          Length = 925

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 153/278 (55%), Gaps = 10/278 (3%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K W  +DL     + N + K+ E +  L  LT L + +NK++E+P  I  L  L  L++S
Sbjct: 16  KGWRELDL-----SGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLS 70

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           +N I +IP+ I   T L     S+NQ+ E+P  + +  NL     +NN I+ +PE++A  
Sbjct: 71  YNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQL 130

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + +++LD+  N++T +    IA  T L EL  S N ++ +PE I  L+ L  L L  N+I
Sbjct: 131 TNLTQLDLYNNQITEIPE-AIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSDNQI 189

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP +I+   +L + Y+ +N ++ +P  + +L+ L  LDL  NQ+ E      +L  L 
Sbjct: 190 TEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEALVKLTNLR 249

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            LDLSNN ++ +P EI      +K+L   N LR +R+S
Sbjct: 250 QLDLSNNQITEIPLEILDSKETKKIL---NYLRQIRTS 284



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 25/247 (10%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S NKL+++P AI +L  L  L +  N I +IP  I + T L++ + S NQ+ E+P +
Sbjct: 21  LDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPEA 80

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL     SNN ++ +PE++A  + +  L +  N+++                   
Sbjct: 81  ITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQIS------------------- 121

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +PE I  L+ L +LDL+ N+I  IP +I+   +L E Y+ NN +S +P E+ +L
Sbjct: 122 -----EIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQL 176

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L  NQ+ E      QL  L+ L LS+N ++ +P  I ++T LR+L L GN + 
Sbjct: 177 TNLRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQIT 236

Query: 312 TLRSSLV 318
            +  +LV
Sbjct: 237 EIPEALV 243



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 139/265 (52%), Gaps = 14/265 (5%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           AA+    L+LS   L  +P  + K               +L  L L +N I ++ + + N
Sbjct: 14  AAKGWRELDLSGNKLTKIPEAIAK-------------LTNLTGLYLHNNKITEIPQVIAN 60

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  LN+S+N++SE+P AI +L  L+ L +S N + +IP+EI   T L     ++NQ+
Sbjct: 61  LTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQI 120

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            E+P  + +  NL+     NN IT +PE +A  + + +L +  N+++ +    IA  T L
Sbjct: 121 SEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEE-IAQLTNL 179

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S N +  +PE I  L+ L  L L  N+I  IP +I+   +L +  +G N ++ +P
Sbjct: 180 RLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIP 239

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVE 271
             L KL+ L  LDL +NQ+ E  +E
Sbjct: 240 EALVKLTNLRQLDLSNNQITEIPLE 264



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 18/263 (6%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS N L+ +P  I K+T L  L L  N +  +   + N     L   ++  L  N+ S
Sbjct: 21  LDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIAN-----LTNLIQLNLSYNQIS 75

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           E      + IT  T L +    LSL    +S IP EI +   +  L L+ N I E+P E+
Sbjct: 76  EIP----EAITQLTNLRL----LSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEI 127

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +   +L  L L  N+I + P+AI   L++L  L L NN + ++P +    +  L++L LS
Sbjct: 128 AQLTNLTQLDLYNNQITEIPEAI-AQLTNLRELYLSNNQISEIPEE-IAQLTNLRLLYLS 185

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N I  +PE    + L +L +LYL   Q+ E P  I +L  LR LDL  N +  IPE   
Sbjct: 186 DNQITEIPE--AITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEALV 243

Query: 519 NLTSLTELDLSDNNISALPPELV 541
            LT+L +LDLS+N I+ +P E++
Sbjct: 244 KLTNLRQLDLSNNQITEIPLEIL 266



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 19/287 (6%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A      +LD+ GNKLT +    IA  T LT L    N +  +P+ I +L+ LI+L+L  
Sbjct: 13  AAAKGWRELDLSGNKLTKIPE-AIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSY 71

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N+I  IP +I+   +L    + NN +S +P E+ +L+ L  L L++NQ+ E   E  QL 
Sbjct: 72  NQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQLT 131

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ LDL NN ++ +P  I ++T LR+L L+ N +  +   +       LL      L +
Sbjct: 132 NLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLL-----YLSD 186

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ +E      + IT  T L+    +L L    ++ IP  I +   + +LDL  N I E+
Sbjct: 187 NQITEIP----EAITQLTNLT----DLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEI 238

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
           P  L    +L+ L LS N+I + P  IL S  +   L    N LRQ+
Sbjct: 239 PEALVKLTNLRQLDLSNNQITEIPLEILDSKETKKIL----NYLRQI 281



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 117/218 (53%), Gaps = 27/218 (12%)

Query: 344 TKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T+++L+ +  + +    +EL L G  L+ IP  I +   +T L L  N I E+P  +++ 
Sbjct: 2   TQDELLALIEQAAAKGWRELDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANL 61

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GF 447
            +L  L LS N+I + P+AI T L++L  L L NN + ++P +                 
Sbjct: 62  TNLIQLNLSYNQISEIPEAI-TQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQI 120

Query: 448 KDIP--MLQILDLS----YN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +IP  + Q+ +L+    YN  I  +PE    + L +L+ELYL   Q+ E P +I +L  
Sbjct: 121 SEIPEEIAQLTNLTQLDLYNNQITEIPE--AIAQLTNLRELYLSNNQISEIPEEIAQLTN 178

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           LR+L LS N +  IPE    LT+LT+L LSDN I+ +P
Sbjct: 179 LRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIP 216


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 164/340 (48%), Gaps = 29/340 (8%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PE+ G L RL  L+L  + + S+P S  G  SL E  + NNAL++LP   G L+ L TL
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ N L         L  L  L L NN+L+ LP   G +++L +L L GN L +L  S 
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESF 120

Query: 318 VNGPTPALLK-YLR----SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
             G   +L+  YL     + LPE     +    E L+T           L+L    L ++
Sbjct: 121 --GDLASLVTLYLHNNALASLPE-----SFGELESLVT-----------LNLHTNALKSL 162

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P    +   +  L L  N++  LP        L TL L  N +   P++    L+SL  L
Sbjct: 163 PESFGDLAILVTLYLHENALASLPESFGDLERLTTLNLYNNALASLPESF-GDLASLVTL 221

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            L++N L  +P + F  +  L+ LDL+ N +ASLPE+  F  L  L  LYLR   L   P
Sbjct: 222 YLNDNALASLP-ESFGGLESLEHLDLNDNALASLPES--FGGLASLVTLYLRNNALASLP 278

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
                L  L  L+L  N+L S+PE F  L SL  L L+DN
Sbjct: 279 ESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTLYLNDN 318



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 156/355 (43%), Gaps = 38/355 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E    L  LT LN+ ++ L+ LP + G L  L  L++  N++  +P+  G   +LV  
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             + N L  LP S G   +L      NN + SLPE     S + +L + GN L  L  + 
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPES- 119

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                 L  L    N L  +PE+ G L  L+ L+LH N + S+P S      L   Y+  
Sbjct: 120 FGDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHE 179

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           NAL++LP   G L +L TL+L++N L         L  L  L L++N+L+ LP   G + 
Sbjct: 180 NALASLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLE 239

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L  L L  N L                    + LPE+    AS     L+T+  R +  
Sbjct: 240 SLEHLDLNDNAL--------------------ASLPESFGGLAS-----LVTLYLRNNA- 273

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                     L+++P    +   +  L+L  N++  LP       SL TL L+ N
Sbjct: 274 ----------LASLPESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTLYLNDN 318



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 167/380 (43%), Gaps = 63/380 (16%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP + G L  L +L++  +++  +P+  G   +LV+ +  +N L  LP S G   +L   
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + SLPE     + +  L        +L NN +AS                +PE+
Sbjct: 61  FLNDNALASLPESFGGLASLEYL--------MLYNNALAS----------------LPES 96

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
            G LS L+ L L  N + S+P S     SL   Y+ NNAL++LP   G+L  L TL+LH+
Sbjct: 97  FGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPESFGELESLVTLNLHT 156

Query: 263 NQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N LK        L + V L L  N+L+ LP   G +  L  L L  N L           
Sbjct: 157 NALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTTLNLYNNAL----------- 205

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                    + LPE        +  DL ++ T        L L    L+++P        
Sbjct: 206 ---------ASLPE--------SFGDLASLVT--------LYLNDNALASLPESFGGLES 240

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +  LDL+ N++  LP      ASL TL L  N +   P++    LSSL  L+L NN L  
Sbjct: 241 LEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESF-GDLSSLVTLELRNNTLTS 299

Query: 442 VPSDGFKDIPMLQILDLSYN 461
           +P + F  +  L  L L+ N
Sbjct: 300 LP-ESFGGLESLVTLYLNDN 318



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +     L+ L+L +N +  L E    L  L  L +  N L+ LP + G+L  L +L +
Sbjct: 72  ESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLYL 131

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N++  +P+  G   +LV  +  +N LK LP S G    L       N + SLPE   D
Sbjct: 132 HNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGD 191

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             +++ L++  N L  L  +       L  L  + N L  +PE+ G L  L  LDL+ N 
Sbjct: 192 LERLTTLNLYNNALASLPES-FGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNA 250

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           + S+P S  G  SL   Y+ NNAL++LP   G LS L TL+L                  
Sbjct: 251 LASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELR----------------- 293

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
                NN+L+ LP   G + +L  L L  N
Sbjct: 294 -----NNTLTSLPESFGGLESLVTLYLNDN 318



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 37/205 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL   +L+ +P             + + +   L  L L  N +  L E   +L  LT 
Sbjct: 151 TLNLHTNALKSLP-------------ESFGDLAILVTLYLHENALASLPESFGDLERLTT 197

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N L+ LP + G+L  L +L ++ N++  +P+  G   +L   D + N L  LP S
Sbjct: 198 LNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPES 257

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
            G   +L      NN + SLPE   D S +  L++  N LT L                 
Sbjct: 258 FGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSL----------------- 300

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQN 217
                  PE+ G L  L+ L L+ N
Sbjct: 301 -------PESFGGLESLVTLYLNDN 318


>gi|449710204|gb|EMD49329.1| leucinerich repeat-containing protein [Entamoeba histolytica KU27]
          Length = 850

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
            +++++LT L    N +N  P+ I  L  L  LDL  N I SIP +I    +L+E  MG 
Sbjct: 46  FSNFSLLTLLRLRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQ 105

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP E+G ++ L  + L +N LKE  +E C L +L+ +DLSNN+    P  +GK++
Sbjct: 106 NNLTSLPKEIGIITTLVNITLPANNLKELPLEMCSLTKLTFVDLSNNNFDNFPQVLGKLS 165

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 357
            +R L +  N L  L+   + G     +K+L   +L  N+ ++      +L  + +    
Sbjct: 166 NIRTLWMFYNNLNKLKG--IEG-----IKHLNQLKLLHNKFTQIPKQIFNLTELCS---- 214

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               L L+   +  IP EI E  ++ ++  +   IQ +P E+ S ++LQ L++ R+++ +
Sbjct: 215 ----LELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNE 270

Query: 418 WP---------------DAILTSLSSL---SCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +P               D+++T +S      C+ L+NN L ++     K  P   +  L+
Sbjct: 271 FPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI-----KCTPNDNVFTLN 325

Query: 460 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                L + P  + L  + ELYL    +++     L    L+IL L+ N L S PE   +
Sbjct: 326 LCNNHLKKIPNTTDLQTIHELYLTNNFIQQIEQTELH-SNLKILTLASNKLTSFPEKGIS 384

Query: 520 LTSLTELDLSDNNISALPPELVSV 543
              L EL+LS+N IS LP  L + 
Sbjct: 385 YNKLKELNLSNNGISQLPNNLFTF 408



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 222/489 (45%), Gaps = 52/489 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  NNI K  + + +L  L  L++S+N ++ +P  I  L+ L  L +  N++  +P EIG
Sbjct: 57  LRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQNNLTSLPKEIG 116

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             T LV     +N LKELP  +     L+    SNN   + P+ L   S +  L +  N 
Sbjct: 117 IITTLVNITLPANNLKELPLEMCSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNN 176

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I     L +L    N    +P+ I +L+ L  L+L  N I  IP  I     
Sbjct: 177 LNKLKG--IEGIKHLNQLKLLHNKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKK 234

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
           L E    +  +  +P E+  LS L  L +  +++ E+                      P
Sbjct: 235 LKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNEF----------------------P 272

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             + KM  +  L++T + +  +  +L N             L  N+ +E   T  D +  
Sbjct: 273 RFLRKMPKISNLIITDSLITEVSCTLNNCCI---------ILENNKLTEIKCTPNDNVFT 323

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL-PPELSSCASLQTLIL 410
                     L+L   +L  IP+   +   I +L L+ N IQ++   EL S  +L+ L L
Sbjct: 324 ----------LNLCNNHLKKIPNT-TDLQTIHELYLTNNFIQQIEQTELHS--NLKILTL 370

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 469
           + NK+  +P+  + S + L  L L NN + Q+P++ F  +P L+IL L  N + ++P + 
Sbjct: 371 ASNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNLFTFLPYLKILKLGINQLTTIPTS- 428

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
               L  L+EL L   +L E P +IL+L  L  L L+ N +  +P+    L +L  +D S
Sbjct: 429 -LGILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNLSQLNNLQVVDFS 487

Query: 530 DNN-ISALP 537
            NN ISALP
Sbjct: 488 SNNIISALP 496



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 208/466 (44%), Gaps = 39/466 (8%)

Query: 106 IPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP+EI     +L   D S NQ+  +  S      L+  +   N I   P+ + D   +  
Sbjct: 18  IPNEIMKLKHSLKSLDLSLNQINSIEPSFSNFSLLTLLRLRGNNINKFPDPILDLQSLKC 77

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N +T +  N++     L+ELI  +N L  +P+ IG ++ L+ + L  N +  +P 
Sbjct: 78  LDLSNNHITSIPPNIVC-LNNLSELIMGQNNLTSLPKEIGIITTLVNITLPANNLKELPL 136

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------------HSNQLKEYC 269
            +     L    + NN     P  LGKLS + TL +               H NQLK   
Sbjct: 137 EMCSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNNLNKLKGIEGIKHLNQLKLLH 196

Query: 270 VEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
            +  Q+         L  L+L NN +  +PPEI ++  L+++  T   ++ +   +V+  
Sbjct: 197 NKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLS 256

Query: 322 TPALLKYLRSRLPENEDSEASTTK-EDLI---TMATRLSVTSKE--LSLEGMNLSAIPSE 375
               L  +RSR+ E         K  +LI   ++ T +S T     + LE   L+ I  +
Sbjct: 257 NLQELVIVRSRVNEFPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI--K 314

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
                 +  L+L  N ++++P   +   ++  L L+ N I+      L S  +L  L L 
Sbjct: 315 CTPNDNVFTLNLCNNHLKKIP-NTTDLQTIHELYLTNNFIQQIEQTELHS--NLKILTLA 371

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
           +N L   P  G      L+ L+LS N I+ LP N  F+ LP+L+ L L   QL   PT +
Sbjct: 372 SNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNL-FTFLPYLKILKLGINQLTTIPTSL 429

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             L QL  L+LS N L   P     LTSLT L L+ N I  LP  L
Sbjct: 430 GILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNL 475



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 205/468 (43%), Gaps = 73/468 (15%)

Query: 46  DLQKLILAHNNIEKLKED----------------LRNLPL-------LTVLNVSHNKLSE 82
           +L +LI+  NN+  L ++                L+ LPL       LT +++S+N    
Sbjct: 97  NLSELIMGQNNLTSLPKEIGIITTLVNITLPANNLKELPLEMCSLTKLTFVDLSNNNFDN 156

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  +G+L  +++L + +N++ K+   I     L +     N+  ++P  +     L   
Sbjct: 157 FPQVLGKLSNIRTLWMFYNNLNKLKG-IEGIKHLNQLKLLHNKFTQIPKQIFNLTELCSL 215

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +  NN I  +P ++ +  K+ ++      +  +    I S + L EL+  ++ +N  P  
Sbjct: 216 ELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEE-IVSLSNLQELVIVRSRVNEFPRF 274

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------FYMGNNALSAL 245
           +  + ++  L +  + I  +  +++ CC + E                   + NN L  +
Sbjct: 275 LRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEIKCTPNDNVFTLNLCNNHLKKI 334

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P     L  +  L L +N +++  +E  +L   L +L L++N L+  P +      L++L
Sbjct: 335 PNT-TDLQTIHELYLTNNFIQQ--IEQTELHSNLKILTLASNKLTSFPEKGISYNKLKEL 391

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSK-- 360
            L+ N +  L ++L        L YL+  +L  N+          L T+ T L + ++  
Sbjct: 392 NLSNNGISQLPNNLF-----TFLPYLKILKLGINQ----------LTTIPTSLGILNQLE 436

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK-IKDWP 419
           EL+L    L+  P  I +   +T L L+ N I +LP  LS   +LQ +  S N  I   P
Sbjct: 437 ELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNLSQLNNLQVVDFSSNNIISALP 496

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
               T++ SLS   +  N    +PS+      M Q+ ++++ I +LPE
Sbjct: 497 LIKCTTIKSLS---MAFNKNLHIPSEL---TLMKQLKNINF-IGTLPE 537



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 29/280 (10%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL L N  +R +P E+   K   E    D   + +        +LQ+L++  + + +   
Sbjct: 214 SLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNEFPR 273

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHML-----------------KSLDVSFNSIMK 105
            LR +P ++ L ++ + ++E+   +    ++                  +L++  N + K
Sbjct: 274 FLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEIKCTPNDNVFTLNLCNNHLKK 333

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+     T + +   ++N ++++  +     NL     ++N +TS PE     +K+ +L
Sbjct: 334 IPNTTDLQT-IHELYLTNNFIQQIEQTELHS-NLKILTLASNKLTSFPEKGISYNKLKEL 391

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N ++ L NNL      L  L    N L  +P ++G L++L  L+L  N++   P +
Sbjct: 392 NLSNNGISQLPNNLFTFLPYLKILKLGINQLTTIPTSLGILNQLEELNLSHNKLTEFPLN 451

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    SL   Y+ +N +  LP  L +L+ L  +D  SN +
Sbjct: 452 ILKLTSLTNLYLTHNYICDLPKNLSQLNNLQVVDFSSNNI 491


>gi|26325922|dbj|BAC26715.1| unnamed protein product [Mus musculus]
          Length = 853

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 238/538 (44%), Gaps = 71/538 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE-DLRNLPLLT 71
           ++NL  + L++ P ++ K                ++ L L  N I+  +  D  +L  L 
Sbjct: 139 TVNLDAKGLQEFPVDIVK-------------VKYVKYLYLDKNQIKNFQGIDPGDLLGLE 185

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++  N LS +P  I   H LK L+ S+N I +IP E+     + +   +SN +  LPS
Sbjct: 186 ILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPS 245

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L     L       N +T +P+ L+    +  L++E N+LT+ S +L      L  L  
Sbjct: 246 GLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSL-CFLPKLNSLNL 304

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N++  +P+ +  L  L  L +  N++  +   I     + E ++ +N L A+  ++  
Sbjct: 305 TGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIEN 364

Query: 252 LSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +L  L+L  N L+       +CV      L  L LS+N++  LP +I K+  LR+L +
Sbjct: 365 FKELRLLNLDKNLLQSIPKKISHCV-----NLESLSLSDNNIEELPKKIRKLKNLRQLHV 419

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELS 363
             N                                       +ITM   +S  S    L 
Sbjct: 420 NRN--------------------------------------KMITMTEEISHLSNIHILE 441

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
             G  ++ +P EI    +IT+++L+ N+I   P  L +  SL  L  + N I + P  + 
Sbjct: 442 FSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMS 501

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
            S   L  L+L+ N L  V S     +  L+ LDL+ N I ++P     S++  L  L L
Sbjct: 502 FS-KQLLHLELNRNKL-TVFSKHLCSLTNLEYLDLAKNQIMTIPS--CISAMVSLHVLIL 557

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              +    P ++  L+ LR+LD+S+N LQ IP     L  + +L LS+N  +  P EL
Sbjct: 558 SDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLHLSNNIFTNFPVEL 615



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 228/499 (45%), Gaps = 35/499 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L  ++N I ++ ++L  L  +  L ++ N +  LP+ +  L  L++L +  N +  
Sbjct: 206 NLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTY 265

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD + S   L   +   NQL     SL     L+    + N I SLP+++ +   +  L
Sbjct: 266 IPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESL 325

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ NKLT L+   I     + EL  + N L  +   I +   L  L+L +N + SIP  
Sbjct: 326 LMDHNKLTFLAVE-IFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKK 384

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           IS C +L    + +N +  LP ++ KL  L  L ++ N++     E   L  + +L+ S 
Sbjct: 385 ISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSG 444

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P EI     + ++ L  N +      L    +   L +  + + E         
Sbjct: 445 NQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE--------- 495

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I +    S     L L    L+     +     +  LDL++N I  +P  +S+  S
Sbjct: 496 ----IPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVS 551

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L  LILS NK + +P   L SL +L  L +  N L+++P +  K +  +Q L LS NI  
Sbjct: 552 LHVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEISK-LKRIQKLHLSNNI-- 607

Query: 465 LPENPPFSSLP-------HLQELYLRRMQLREA---PTDILRLQQLRILDLSQNSLQSIP 514
                 F++ P        L+EL + +   ++    P ++  + QL+IL++S N+++ IP
Sbjct: 608 ------FTNFPVELCQRQTLEELNISQTSGKKVTRLPEEVSHMTQLKILNISNNAIKDIP 661

Query: 515 EGFKNLTSLTELDLSDNNI 533
           +    L SL     S+N I
Sbjct: 662 KNIGELRSLVSFYASNNQI 680



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 184/417 (44%), Gaps = 59/417 (14%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NNIE+L + +R L  L  L+V+ NK+  +   I  L  +  L+ S
Sbjct: 384 KISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFS 443

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P D++  
Sbjct: 444 GNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFS 503

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NKLTV S +L                         SL+ L  LDL +N+I
Sbjct: 504 KQLLHLELNRNKLTVFSKHLC------------------------SLTNLEYLDLAKNQI 539

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
           ++IPS IS   SL    + +N   + P EL  L  L  LD+  N+L++  +E  +L R+ 
Sbjct: 540 MTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQ 599

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L LSNN  +  P E+ +  TL +L ++    + +                 +RLPE   
Sbjct: 600 KLHLSNNIFTNFPVELCQRQTLEELNISQTSGKKV-----------------TRLPEE-- 640

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     ++  T+L +    L++    +  IP  I E   +     S N I  LP  
Sbjct: 641 ----------VSHMTQLKI----LNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSS 686

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             S   LQ+L L  N +   P  I   LSSL  +  D+NPL + P +  K   M  I
Sbjct: 687 FLSLEVLQSLDLRGNNMTALPSGIY-KLSSLKEINFDDNPLMRPPMEICKGKEMHMI 742



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 210/498 (42%), Gaps = 67/498 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N I  L +++R L  L  L + HNKL+ L   I +L  +K L ++ N +  I
Sbjct: 299 LNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI 358

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             +I +   L   +   N L+ +P  +  C+NL     S+N I  LP+ +     + +L 
Sbjct: 359 SPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLH 418

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NK+  ++   I+  + +  L  S N +  +P  I +  ++ R++L+ N I+  P  +
Sbjct: 419 VNRNKMITMTEE-ISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGL 477

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL       N +S +P ++    +L  L+L+ N+L  +    C L  L  LDL+ N
Sbjct: 478 CALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKN 537

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  +P  I  M +L  L+L+ N   +    L +      LK LR               
Sbjct: 538 QIMTIPSCISAMVSLHVLILSDNKFESFPKELCS------LKNLRV-------------- 577

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                           L +    L  IP EI +   I KL LS N     P EL    +L
Sbjct: 578 ----------------LDISENKLQKIPLEISKLKRIQKLHLSNNIFTNFPVELCQRQTL 621

Query: 406 QTLILSR---NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           + L +S+    K+   P+ + + ++ L  L + NN ++ +P +                 
Sbjct: 622 EELNISQTSGKKVTRLPEEV-SHMTQLKILNISNNAIKDIPKN----------------- 663

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                      L  L   Y    Q+   P+  L L+ L+ LDL  N++ ++P G   L+S
Sbjct: 664 --------IGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSS 715

Query: 523 LTELDLSDNNISALPPEL 540
           L E++  DN +   P E+
Sbjct: 716 LKEINFDDNPLMRPPMEI 733


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G T                                   + +EL     
Sbjct: 286 NQLMYLPDS-IGGLT-----------------------------------SIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLTSIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLEILPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
            L  + L+ N  + L    + +        L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQPRTED 435



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N    +L K
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN--CQSLHK 73

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                             LSL   +L+ +P+ I     + +LD+
Sbjct: 74  ----------------------------------LSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 161/330 (48%), Gaps = 50/330 (15%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQ 48
           ++++ A T G   L+LS  +L  +P E+ K             +D+ G        VD+ 
Sbjct: 8   KVIEQAATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGY------IVDI- 60

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
                 NN+  L ++L  L  L  L V  N L+ LP+AIG+L  L++  + +N +  +P 
Sbjct: 61  ----IGNNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPR 116

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG  + L   D  SNQL  LP  +G+  +L      +N ++SLP ++   + +  LD+ 
Sbjct: 117 EIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLG 176

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L+ L                        P  IG L  L  L L++NR++ +PS I  
Sbjct: 177 DNQLSSL------------------------PREIGQLFNLQSLYLYKNRLIDLPSEIGQ 212

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
              L    +G+N LS LP E+G+LS L +L L  NQL     E  QL  L  LDLS N L
Sbjct: 213 LSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQL 272

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           S LP +IG++T L+ L+L  N L +L S +
Sbjct: 273 SSLPKKIGQLTNLQWLILHNNQLSSLPSEI 302



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 1/218 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ  +L +N +  L  ++  L  L +L++  N+LS LP  IG+L  L+ L +  N 
Sbjct: 97  QLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQ 156

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EI   T L   D   NQL  LP  +G+  NL       N +  LP ++   S +
Sbjct: 157 LSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHL 216

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L++  N+L+ L    I   + L  L   +N L+ +P     L+ L RLDL  N++ S+
Sbjct: 217 ESLNLGDNQLSNLPRE-IGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSL 275

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           P  I    +L    + NN LS+LP+E+G+L+ L +LDL
Sbjct: 276 PKKIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 159/366 (43%), Gaps = 79/366 (21%)

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRL--------------DLHQNRILSIPSSI 226
           A+   +TEL  S N L  +P  IG L++L +L              D+  N + ++P  +
Sbjct: 13  AATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKEL 72

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E  +  N L+ LP+ +G+L+ L T  L  NQL     E  QL  L +LD+ +N
Sbjct: 73  GLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSN 132

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            LS LP EIG+++ L+ L                        YLRS              
Sbjct: 133 QLSSLPREIGQLSHLQLL------------------------YLRSN------------- 155

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                                  LS++P EI +   +  LDL  N +  LP E+    +L
Sbjct: 156 ----------------------QLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNL 193

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           Q+L L +N++ D P  I   LS L  L L +N L  +P +    +  L+ L L  N ++S
Sbjct: 194 QSLYLYKNRLIDLPSEI-GQLSHLESLNLGDNQLSNLPRE-IGQLSNLRSLGLGENQLSS 251

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LP    F+ L +LQ L L   QL   P  I +L  L+ L L  N L S+P     LT+L 
Sbjct: 252 LPNE--FTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEIGQLTNLR 309

Query: 525 ELDLSD 530
            LDL+D
Sbjct: 310 SLDLAD 315



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 143/315 (45%), Gaps = 49/315 (15%)

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           +    + E  +  N L+ALP E+GKL++L  L L   Q   Y  E       ++D+  N+
Sbjct: 13  AATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQ---YDQEGY-----IVDIIGNN 64

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           LS LP E+G +  L +LL+  N L TL S+                              
Sbjct: 65  LSALPKELGLLNQLEELLVLANHLTTLPSA------------------------------ 94

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I   T L    +   L+   LS++P EI +   +  LD+  N +  LP E+   + LQ
Sbjct: 95  --IGQLTNL----QTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQ 148

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 465
            L L  N++   P  I   L++L  L L +N L  +P +    +  LQ L L  N +  L
Sbjct: 149 LLYLRSNQLSSLPREI-EQLTNLRSLDLGDNQLSSLPRE-IGQLFNLQSLYLYKNRLIDL 206

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P       L HL+ L L   QL   P +I +L  LR L L +N L S+P  F  LT+L  
Sbjct: 207 PSE--IGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQR 264

Query: 526 LDLSDNNISALPPEL 540
           LDLS N +S+LP ++
Sbjct: 265 LDLSFNQLSSLPKKI 279



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L +  L  +P E+ + F+             LQ L L  N +  L  ++  L  L  
Sbjct: 172 SLDLGDNQLSSLPREIGQLFN-------------LQSLYLYKNRLIDLPSEIGQLSHLES 218

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+LS LP  IG+L  L+SL +  N +  +P+E    T L + D S NQL  LP  
Sbjct: 219 LNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKK 278

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           +G+  NL      NN ++SLP ++   + +  LD+
Sbjct: 279 IGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           SLNL +  L ++P E+ +  N    G G+        ++ +  +LQ+L L+ N +  L +
Sbjct: 218 SLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPK 277

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
            +  L  L  L + +N+LS LP+ IG+L  L+SLD++
Sbjct: 278 KIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDLA 314


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|25396047|pir||A88684 protein AC7.2 [imported] - Caenorhabditis elegans
          Length = 613

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 201/418 (48%), Gaps = 34/418 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  + E + NL  L +L+V  NK+ ELP+AIG+L  L    VS+N
Sbjct: 208 YKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYN 267

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P+EIG   +L + D   N L ELP S+G+ +NL       N I  +P +L  C +
Sbjct: 268 HLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQ 327

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI---RLDLHQNR 218
           + +  VE N L +L  NL+     +  +  S+N L   P   G   + +    +++  N+
Sbjct: 328 LEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPA--GGPQQFVSTVTINMEHNQ 385

Query: 219 ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           I  IP  I S    L +  +  N L +LP ++G  + +  L+L +NQLK    +  +L  
Sbjct: 386 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 445

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L +L LSNN L  LP +IG +  LR+L L  N L T+ + +        L++L       
Sbjct: 446 LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEI------GFLQHL------- 492

Query: 337 EDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA--------GEITKLD 386
             ++       ++T+   +    + ++L L   NL+AIP EI E           +  L 
Sbjct: 493 --TKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSLY 550

Query: 387 LSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQV 442
           L+ NS +  LP EL+ C SL+ + +  + +   P  I     SL    L    P R V
Sbjct: 551 LNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYRGV 608



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 219/463 (47%), Gaps = 66/463 (14%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL-----PAAIGELHMLKSLD 97
           + V+L+KL L+ N +  L + L +L  L  L++ HNKL+E+     P+ I ++  L++L 
Sbjct: 158 QLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVIFLQVPSVIYKIGSLETLW 217

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           + +N I+ + ++IG+ + L   D   N+++ELPS++G+  +L     S N +T +PE++ 
Sbjct: 218 LRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIG 277

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           DC  +++LD++ N L+ L                        P +IG L  L+R+ +  N
Sbjct: 278 DCHSLTQLDLQHNDLSEL------------------------PYSIGKLVNLVRIGIRYN 313

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           +I  IPS +  C  L EF + +N L  LP   L  L K+ T++L  N+L  +     Q  
Sbjct: 314 KIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQF 373

Query: 277 LS--VLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           +S   +++ +N +S +P  I  K T L KL L  N L +L   + +  +   L    ++L
Sbjct: 374 VSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQL 433

Query: 334 PE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-------------AIPSEIWEA 379
               ED E     E L+    +L    K+L  +  NL+              +P+EI   
Sbjct: 434 KVLPEDIEKLVNLEILVLSNNQL----KKLPNQIGNLNKLRELDLEENELETVPTEIGFL 489

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD-------AILTSLSSLSCL 432
             +TKL +  N I  LP  + +  SLQ L L  N +   P+        I + L SL  L
Sbjct: 490 QHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSL 549

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
            L++N           ++P    L  S  I S+ EN P S +P
Sbjct: 550 YLNDN-------SSLHNLPFELALCQSLEIMSI-ENSPLSQIP 584



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 200/424 (47%), Gaps = 45/424 (10%)

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL----SNNL 179
           N+L  LP+ +G+ +NL     S N +TSLP+ LA    +  LD+  NKLT +      ++
Sbjct: 147 NKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVIFLQVPSV 206

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L    N +  + E IG+LS+L  LD+ +N+I  +PS+I    SL    +  
Sbjct: 207 IYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSY 266

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ +P E+G    L  LDL  N L E      +L  L  + +  N +  +P E+    
Sbjct: 267 NHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQ 326

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-DSEASTTKEDLITMATRLSV 357
            L + ++  N L+ L  +L+      L K     L  NE  +  +   +  ++  T    
Sbjct: 327 QLEEFIVESNHLQLLPPNLLT----MLPKIHTVNLSRNELTAFPAGGPQQFVSTVT---- 378

Query: 358 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
               +++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K
Sbjct: 379 ----INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLK 434

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P+ I   L +L  L L NN L+++P+                            +L  
Sbjct: 435 VLPEDI-EKLVNLEILVLSNNQLKKLPNQ-------------------------IGNLNK 468

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+EL L   +L   PT+I  LQ L  L +  N + ++P    NL SL +L L +NN++A+
Sbjct: 469 LRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAI 528

Query: 537 PPEL 540
           P E+
Sbjct: 529 PEEI 532



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 57/259 (22%)

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG++  L+KL L+ N L +L  SL                          +
Sbjct: 147 NKLTCLPTEIGQLVNLKKLGLSENALTSLPDSL-------------------------AS 181

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E L T+  R +  ++ + L+      +PS I++ G +  L L  N I  +  ++ + + 
Sbjct: 182 LESLETLDLRHNKLTEVIFLQ------VPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSK 235

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L +  NKI++ P AI   L+SL    +  N L +VP +   D   L  LDL +N   
Sbjct: 236 LKMLDVRENKIRELPSAI-GKLTSLVVCLVSYNHLTRVPEE-IGDCHSLTQLDLQHN--- 290

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
                                 L E P  I +L  L  + +  N ++ IP   ++   L 
Sbjct: 291 ---------------------DLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLE 329

Query: 525 ELDLSDNNISALPPELVSV 543
           E  +  N++  LPP L+++
Sbjct: 330 EFIVESNHLQLLPPNLLTM 348


>gi|332206768|ref|XP_003252466.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Nomascus leucogenys]
          Length = 860

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 249/568 (43%), Gaps = 53/568 (9%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N +  L 
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            +++ L  L +LNVSHN +S +P  I +L  ++ L    N I   P ++     L     
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 122 SSNQLKELPSSLG-----RCLNLS------------------DFKASNNCITSLPEDLAD 158
             N+L+ +P +L      R LNL                       + N I+SLP+++ +
Sbjct: 265 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRE 324

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N 
Sbjct: 325 LKNLETLLLDHNKLTFLAVE-IFQLLRIKELQLADNKLEVISHKIENFRELRILILDKNL 383

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + +IP  IS C  L    + +N L+ LP  + KL+ L  L ++ N + +       L  +
Sbjct: 384 LKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNI 443

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++G+P EI     + K+ L+ N +      L    +   L YL   +  N 
Sbjct: 444 CSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYL--NVNGNY 498

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            SE        I +    S     L L    L            +  LDL +N I+++P 
Sbjct: 499 ISE--------IPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 550

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
            +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q L+
Sbjct: 551 SISNMISLHVLILRCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQKLN 608

Query: 458 LSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ IP 
Sbjct: 609 FSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPR 668

Query: 516 GFKNLTSLTELDLSDNNISALPPELVSV 543
               L +L  L   +N IS LPP L+S+
Sbjct: 669 NIGELRNLVSLHAYNNQISYLPPSLLSL 696



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 251/557 (45%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEI----SQLG---------NIRQLFFYNNYIENFPSDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  +P  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    ++ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 323 RELKNLETLLLDHNKLTFLAVEIFQLLRIKELQLADNKLEVISHK-IENFRELRILILDK 381

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L+ L +L +++N ++ I  SIS   
Sbjct: 382 NLLKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLN 441

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N++  + +  C L  L  L+++ N +S 
Sbjct: 442 NICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLNVNGNYISE 501

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L+ N L        SL+N      LKYL   L +N+  +   +  
Sbjct: 502 IPVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASIS 553

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++          L L        P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 554 NMISLHV--------LILRCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ 605

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L  S N+   +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I 
Sbjct: 606 KLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIR 664

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL
Sbjct: 665 EIPRN--IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSL 722

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 723 KEINFDDNPLLRPPMEI 739



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 373 ELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVK 432

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  +   + S N I   P  L     +  L
Sbjct: 433 ITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYL 492

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 493 NVNGNYISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 551

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 552 ISNMISLHVLILRCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSS 611

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 612 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 666

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 667 ----PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 717

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 718 NLFSLKEINFDDNPL--LRPPMEICKGRQLYTIAR 750



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD+
Sbjct: 527 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILRCNKFETFPRELCTLENLQVLDL 586

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLP 153
           S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T LP
Sbjct: 587 SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRLP 644

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L+
Sbjct: 645 GELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLN 703

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 704 LSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGRQLYTI 748


>gi|397476828|ref|XP_003809793.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pan paniscus]
          Length = 860

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 251/557 (45%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEI----SQLG---------NIRQLFFYNNYIENFPTDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  +P  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    K+ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 323 RELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHK-IENFRELRILILDK 381

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L+ L +L +++N ++ I  SIS   
Sbjct: 382 NLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLN 441

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N +  + +  C L  L  L ++ N +S 
Sbjct: 442 NICSLEFSGNIITDVPIEIKNCQKIIKIELSYNNIMYFPLGLCALDSLYYLSVNGNYISE 501

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L+ N L        SL+N      LKYL   L +N+  +   +  
Sbjct: 502 IPVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASIS 553

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++   +   +K            P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 554 NMISLHVLILCCNK--------FETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ 605

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L LS N+   +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I 
Sbjct: 606 KLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIR 664

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL
Sbjct: 665 EIPRN--IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSL 722

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 723 KEINFDDNPLLRPPMEI 739



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 253/570 (44%), Gaps = 57/570 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N +  L 
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-----------------------LDV 98
            +++ L  L +LNVSHN +S +P  I +L  ++                        L +
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPTDLECLGNLEILSL 264

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  IPD + S   L   +   NQL   P +L     L     + N I+SLP+++ +
Sbjct: 265 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRE 324

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N 
Sbjct: 325 LKNLETLLMDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNL 383

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + +IP  IS C  L    + +N L+ LP  + KL+ L  L ++ N + +       L  +
Sbjct: 384 LKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNI 443

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++ +P EI     + K+ L+ N +      L    +   L YL        
Sbjct: 444 CSLEFSGNIITDVPIEIKNCQKIIKIELSYNNIMYFPLGLCALDS---LYYL-------- 492

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSRNSIQEL 395
               S     +  +   +S + + L LE   N   I SE +     +  LDL +N I+++
Sbjct: 493 ----SVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKI 548

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q 
Sbjct: 549 PASISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQK 606

Query: 456 LDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           L+LS N     P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ I
Sbjct: 607 LNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI 666

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P     L +L  L   +N IS LPP L+S+
Sbjct: 667 PRNIGELRNLVSLHAYNNQISYLPPSLLSL 696



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 373 ELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVK 432

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N + ++P  +  C  +   + S N I   P  L     +  L
Sbjct: 433 ITDSISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNNIMYFPLGLCALDSLYYL 492

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 493 SVNGNYISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 551

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 552 ISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNLSS 611

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 612 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 666

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 667 ----PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 717

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 718 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 750



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD+
Sbjct: 527 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDL 586

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLP 153
           S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T LP
Sbjct: 587 SENQLQKISSDICNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRLP 644

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L+
Sbjct: 645 GELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLN 703

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 704 LSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748


>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
          Length = 1352

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 194/426 (45%), Gaps = 51/426 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+ S+ SL  VP E++ NF++            LQ+L L  N IE+L + L N  LL  
Sbjct: 31  SLDYSHCSLETVPKEIF-NFEKT-----------LQELYLDANQIEELPKQLFNCQLLNR 78

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPAAI  L  L+ LDVS NSI   P+ I +   L   + S N + +LP  
Sbjct: 79  LSMPDNDLTVLPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEG 138

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + L+L+    ++  +  LP      +K+  L++  N+L +L                 
Sbjct: 139 FTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKML----------------- 181

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+++  L++L RLDL  N    +P  +     L E +M  N L+ LP  LG L
Sbjct: 182 -------PKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFLPGMLGTL 234

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  LD+  N L+    + C    L  L LSNN+L+ LP  IG +  L  L +  N L 
Sbjct: 235 KQLVYLDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLM 294

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  S + G T   +  L     E E   A+  +           V  +  + +   L+ 
Sbjct: 295 YLPDS-IGGLT--CIDELDCSFNEIEALPATIGQ----------CVNMRTFAADHNFLAQ 341

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P E+      T L L  N ++ LP E+     L+ + LS NK+K+ P +  T L+ L+ 
Sbjct: 342 LPPEMGNWKRATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYS-FTKLTELTA 400

Query: 432 LKLDNN 437
           + L  N
Sbjct: 401 MWLSEN 406



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 197/454 (43%), Gaps = 67/454 (14%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++ SLD S  S+  +P EI        F+ +                L +     N
Sbjct: 24  GEEEIVTSLDYSHCSLETVPKEI------FNFEKT----------------LQELYLDAN 61

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  +++L +  N LTVL    IA+   L EL  SKN +   PE I +  
Sbjct: 62  QIEELPKQLFNCQLLNRLSMPDNDLTVLP-AAIANLINLRELDVSKNSIQDFPENIKNCK 120

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   SL + Y+ +  L  LPA  G+L+KL  L+L  NQLK 
Sbjct: 121 GLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKM 180

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                 +L +L  LDL +N  + +P  + ++T L++L + GN L  L         P +L
Sbjct: 181 LPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFL---------PGML 231

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L+  +                            L +   NL  +  +I     +  L 
Sbjct: 232 GTLKQLV---------------------------YLDVSKNNLEMVDEQICGCENLQDLL 264

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPS 444
           LS N++ +LP  + +   L  L +  N++   PD+I  LT +  L C     N +  +P+
Sbjct: 265 LSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDSIGGLTCIDELDC---SFNEIEALPA 321

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              + + M         +A LP  P   +      L+L   +L   P ++  +Q+L++++
Sbjct: 322 TIGQCVNMRTFAADHNFLAQLP--PEMGNWKRATVLFLHSNKLESLPEEMGDMQKLKVIN 379

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           LS N L+++P  F  LT LT + LS+N    L P
Sbjct: 380 LSNNKLKNLPYSFTKLTELTAMWLSENQSKPLIP 413


>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
          Length = 582

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 62/349 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSK-------------------------------- 161
           G   +LS      N ++++P  L+ CS                                 
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLAR 340

Query: 162 ----------------MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
                           +  L++E N++  +   + +   +L++L    N L  +P   G+
Sbjct: 341 NCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            + ++ L+L  N++  IP  +SG  SL    + NN L  LP  LG L KL  LDL  N+L
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKL 460

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +    E   L+ L  L L+NN L+ LP  IG +T L  L L  N L  L
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 221/454 (48%), Gaps = 28/454 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + 
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP----ALLKYLR 330
             LS L L  N LS +P  + K + L +L L  N + TL  SL++         L +   
Sbjct: 284 SSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCF 343

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSR 389
              P    S+ ST                  L++E   ++ IP  I+   ++ +KL++  
Sbjct: 344 QLYPVGGPSQFSTIYS---------------LNMEHNRINKIPFGIFSRAKVLSKLNMKD 388

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  +
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGN 446

Query: 450 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           +  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L +N
Sbjct: 447 LRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

Query: 509 SLQSIPEGFKNLTSLTELDLSDN-NISALPPELV 541
            L  +PE    L +L EL L+DN N+ +LP EL 
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 96/458 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFY------------------------MGNNALSALP-AELGKLSKLGTLD 259
           S+S C +L E                          +  N     P     + S + +L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 260 LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +  N++ +  + + +    LS L++ +N L+ LP + G  T++ +L L  N L       
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL------- 414

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                        +++P  ED     + E LI              L    L  +P  + 
Sbjct: 415 -------------TKIP--EDVSGLVSLEVLI--------------LSNNLLKKLPHGLG 445

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
              ++ +LDL  N ++ LP E++    LQ L+L+ N++   P  I   L++L+ L L  N
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGEN 504

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
            L  +P    ++I  L+ L+  Y    L +NP   SLP
Sbjct: 505 LLTHLP----EEIGTLENLEELY----LNDNPNLHSLP 534



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 165/381 (43%), Gaps = 64/381 (16%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L+ L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASLQTL---------------------------------------- 408
            N + +LP  + + +SL  L                                        
Sbjct: 270 HNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSS 329

Query: 409 -------ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
                   L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++  N
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDN 389

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  NL
Sbjct: 390 QLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNL 447

Query: 521 TSLTELDLSDNNISALPPELV 541
             L ELDL +N + +LP E+ 
Sbjct: 448 RKLRELDLEENKLESLPNEIA 468



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 65/269 (24%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
           C E   +RL   DLS  S+  LP  I ++T L +L L  N L++L         PA +  
Sbjct: 97  CREENSMRL---DLSKRSIHILPSSIKELTQLTELYLYSNKLQSL---------PAEVGC 144

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                 +L+T+A           L   +L+++P  +    ++  LDL 
Sbjct: 145 LV----------------NLMTLA-----------LSENSLTSLPDSLDNLKKLRMLDLR 177

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++E+P  +    SL TL L  N+I      I  +LS LS L +  N ++Q+P++   
Sbjct: 178 HNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKIKQLPAE-IG 235

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
           ++  L  LD+++N                        QL   P +I    Q+  LDL  N
Sbjct: 236 ELCNLITLDVAHN------------------------QLEHLPKEIGNCTQITNLDLQHN 271

Query: 509 SLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L  +P+   NL+SL+ L L  N +SA+P
Sbjct: 272 ELLDLPDTIGNLSSLSRLGLRYNRLSAIP 300


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 25/257 (9%)

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           + L E L+N   + +L++++N+L+ LP  IG+L  L+ L +  N +  +P++IG    L 
Sbjct: 32  QNLIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQ 91

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                 NQLK LP  +G+  NL     S+N +TSLP+D+    K+ +L ++ N+L  L  
Sbjct: 92  VLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTL-- 149

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
                                 P+ IG L +L  L L+ N++  +P  I     L   ++
Sbjct: 150 ----------------------PKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHL 187

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
           G+N L  LP ++GKL  L  L L SNQL     +  +L+ L VLDL  N L+ LP +IGK
Sbjct: 188 GDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGK 247

Query: 297 MTTLRKLLLTGNPLRTL 313
           +  L+KL L G    T+
Sbjct: 248 LQNLQKLHLNGYEFTTI 264



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 14/247 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L  +P ++ K               +LQKL L  N +  L ED+  L  L VL
Sbjct: 47  LDLTNNQLTTLPKDIGK-------------LQNLQKLYLDGNQLTTLPEDIGYLKELQVL 93

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP  IG+L  L+ L +S N +  +P +IG    L +     NQL+ LP  +
Sbjct: 94  HLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDI 153

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L +    NN +T LP+D+    K+ +L +  N+L  L  + I     L  L    
Sbjct: 154 GKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKD-IGKLQNLRVLKLDS 212

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  LDL  N++ ++P  I    +L + ++     + +P E+G+L 
Sbjct: 213 NQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQ 272

Query: 254 KLGTLDL 260
           KL  L L
Sbjct: 273 KLQELYL 279



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 11/185 (5%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L+G  L+ +P +I    E+  L L  N ++ LP E+    +L+ L LS NK+   P
Sbjct: 68  QKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLP 127

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD--LSYN--IASLPENPPFSSLP 475
             I   L  L  L LD+N LR +P    KDI  LQ L   L YN  +  LP++     L 
Sbjct: 128 KDI-GQLQKLQRLHLDDNQLRTLP----KDIGKLQKLRELLLYNNQLTMLPKD--IGQLQ 180

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            LQ L+L   QLR  P DI +LQ LR+L L  N L ++P+    L +L  LDL  N ++ 
Sbjct: 181 KLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLAT 240

Query: 536 LPPEL 540
           LP ++
Sbjct: 241 LPKDI 245



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 3/87 (3%)

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           ILDL+ N + +LP++     L +LQ+LYL   QL   P DI  L++L++L L  N L+++
Sbjct: 46  ILDLTNNQLTTLPKD--IGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTL 103

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P+    L +L  L LS N +++LP ++
Sbjct: 104 PKEIGQLQNLRVLGLSHNKLTSLPKDI 130


>gi|421132053|ref|ZP_15592227.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356605|gb|EKP03922.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 403

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 177/352 (50%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L+ LP  IG+L  L+ L +  N +  +P+EIG    L   D + N++   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  NL     + N ++ LPE++ + ++++ L++  N+LT L   +     +LT L  
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLT-LYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N LN +P  +G L  LI L L  N+++S+P  I    +L   ++ +N  + LP E+GK
Sbjct: 169 SGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LD+  N+   +  E  +L +L+VL+LSNN L+ LP EIG++  L  L L+ N L
Sbjct: 229 LENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  +  L++                       L V    L L G NLS
Sbjct: 289 NSL---------PNEMGQLKN-----------------------LDV----LYLNGNNLS 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P EI E  +++ L L  N +  LP E+    +L TL LS NK+   P+ +
Sbjct: 313 NLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNEL 364



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 142/273 (52%), Gaps = 6/273 (2%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++W+  +L+ L L  N +  L E++R L  L VLN++ N+L+ LP  IG+L  L +L +S
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLS 169

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++  +P+E+G    L+    S N+L  LP  + +  NL      +N   +LPE++   
Sbjct: 170 GNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGKL 229

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             +  LD+  N+ +         W +  L  L  S N L  +P+ IG L  L  L L  N
Sbjct: 230 ENLKILDISRNRFSTFPKEF---WKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ S+P+ +    +L   Y+  N LS LP E+G+L KL  L L SNQL     E  QL  
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L  L LSNN L  +P E+G++  L  L L  NP
Sbjct: 347 LVTLSLSNNKLISIPNELGQLRNLSLLNLRYNP 379



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK       L+LS+  L  +P E+              + V+L++L L +N +  L E++
Sbjct: 42  LKTPNEVRILDLSSNRLTTLPKEI-------------GQLVNLERLYLLNNELTTLPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L+++ N++S  P    +L  L+ L ++ N +  +P+EI     L   + + N
Sbjct: 89  GKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL     S N + SLP ++     +  L + GNKL  L    I    
Sbjct: 149 QLTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKE-IRQLG 207

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N  N +PE IG L  L  LD+ +NR  + P        L    + NN L+ 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTT 267

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  N+L     E  QL+ L VL L+ N+LS LP EIG++  L  L
Sbjct: 268 LPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSIL 327

Query: 304 LLTGNPLRTL 313
            L  N L  L
Sbjct: 328 KLDSNQLTIL 337



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR+ ++P  I    +L   Y+ NN L+ LP E+GKL  L TLD+  N++  +  E
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L VL L+ N LS LP EI ++  L  L L  N L TL         P  +  L 
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTL---------PKEIGQL- 160

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E+L+T           L L G NL+++P+E+ +   +  L LS N
Sbjct: 161 ---------------ENLLT-----------LYLSGNNLNSLPNEMGQLKNLISLYLSGN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +L  L L  N+    P+ I   L +L  L +  N     P + +K +
Sbjct: 195 KLISLPKEIRQLGNLGILHLFDNEFNTLPEEI-GKLENLKILDISRNRFSTFPKEFWK-L 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L +L+LS N + +LP+      L +L  L+L   +L   P ++ +L+ L +L L+ N+
Sbjct: 253 KKLNVLNLSNNQLTTLPK--EIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PE    L  L+ L L  N ++ LP E+
Sbjct: 311 LSNLPEEIGELKKLSILKLDSNQLTILPKEI 341



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 28/161 (17%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLS N +  LP E+    +L+ L L  N++   P+ I          KL+N    
Sbjct: 47  EVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIG---------KLEN---- 93

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
                       L+ LD++ N I++ P+   F  L +L+ L+L   +L   P +I  L +
Sbjct: 94  ------------LKTLDITRNRISTFPK--EFWKLKNLEVLFLNGNRLSYLPEEIRELNR 139

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L +L+L+ N L ++P+    L +L  L LS NN+++LP E+
Sbjct: 140 LNVLNLNDNQLTTLPKEIGQLENLLTLYLSGNNLNSLPNEM 180


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|256078767|ref|XP_002575666.1| shoc2 [Schistosoma mansoni]
 gi|353232025|emb|CCD79380.1| putative shoc2 [Schistosoma mansoni]
          Length = 396

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 192/407 (47%), Gaps = 40/407 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK 105
           +++L L +N +  +   + NL  L  L V  N+L   +P  IG L  LK+LD+S N + K
Sbjct: 1   MKQLYLTYNKLTDISA-IGNLRFLQTLVVKSNQLQGPIPDCIGNLTQLKTLDLSKNRLTK 59

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I + IG+   L +F    NQ+ ELP S+G+   L+      NC++ LP  + +C K+++L
Sbjct: 60  ITENIGNCKLLSRFLVDYNQIDELPKSIGQLSELTVLGIKYNCLSELPVTICNCEKLTEL 119

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++EGN +T L  NL+        ++ S N  N  P  IG  ++      ++N        
Sbjct: 120 NIEGNHITQLPENLLCHLKDSLSVVLSHNDFNSFP--IGDKTQ------YKN-------- 163

Query: 226 ISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 282
                 +  F +  N L    A +L + ++L TL+L +N +        +    L  LDL
Sbjct: 164 ------VKHFRLDYNRLELFEAVQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDL 217

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S N +  LP  IG++ +L  L LT N L  L + +       L++ ++  L  N+ +   
Sbjct: 218 SYNQIGQLPDSIGELVSLEVLDLTSNRLEGLPNRI-----GELVRLVQLELESNQITSIP 272

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  + T        L+L+   LS +PS I     + KL +  N +Q LPPE+   
Sbjct: 273 LNIGQLCQLQT--------LNLDVNKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKL 324

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
            +L  L LS NK  D     L  LSSL  L +D   LRQ+P D  K+
Sbjct: 325 ENLTHLYLSNNKPLDLLPIELGMLSSLRFLGIDGCSLRQMPVDITKN 371



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 157/347 (45%), Gaps = 53/347 (15%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D       L+ L L+ N + K+ E++ N  LL+   V +N++ ELP +IG+L  L  L +
Sbjct: 39  DCIGNLTQLKTLDLSKNRLTKITENIGNCKLLSRFLVDYNQIDELPKSIGQLSELTVLGI 98

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPS--------SLGRCLNLSDFKA------ 144
            +N + ++P  I +   L + +   N + +LP         SL   L+ +DF +      
Sbjct: 99  KYNCLSELPVTICNCEKLTELNIEGNHITQLPENLLCHLKDSLSVVLSHNDFNSFPIGDK 158

Query: 145 ------------------------------------SNNCITSLPEDLADCSKMSKLDVE 168
                                               +NN IT     +     + +LD+ 
Sbjct: 159 TQYKNVKHFRLDYNRLELFEAVQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDLS 218

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N++  L ++ I     L  L  + N L G+P  IG L RL++L+L  N+I SIP +I  
Sbjct: 219 YNQIGQLPDS-IGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNIGQ 277

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS- 286
            C L    +  N LS LP+ +G L+ L  L +  N L+    E  +L  L+ L LSNN  
Sbjct: 278 LCQLQTLNLDVNKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLTHLYLSNNKP 337

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  LP E+G +++LR L + G  LR +   +    + +++KYLR  L
Sbjct: 338 LDLLPIELGMLSSLRFLGIDGCSLRQMPVDITKNGSASVIKYLRDLL 384



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 42/310 (13%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLS 288
           + + Y+  N L+ + A +G L  L TL + SNQL+     C+     +L  LDLS N L+
Sbjct: 1   MKQLYLTYNKLTDISA-IGNLRFLQTLVVKSNQLQGPIPDCIGNLT-QLKTLDLSKNRLT 58

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            +   IG    L + L+  N +  L  S                                
Sbjct: 59  KITENIGNCKLLSRFLVDYNQIDELPKS-------------------------------- 86

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQT 407
           I   + L+V    L ++   LS +P  I    ++T+L++  N I +LP  L        +
Sbjct: 87  IGQLSELTV----LGIKYNCLSELPVTICNCEKLTELNIEGNHITQLPENLLCHLKDSLS 142

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 467
           ++LS N    +P    T   ++   +LD N L    +    +   L  L+L  N     +
Sbjct: 143 VVLSHNDFNSFPIGDKTQYKNVKHFRLDYNRLELFEAVQLSENTQLTTLNLCNNNIITLD 202

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 527
                +L HL EL L   Q+ + P  I  L  L +LDL+ N L+ +P     L  L +L+
Sbjct: 203 FTGIETLKHLVELDLSYNQIGQLPDSIGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLE 262

Query: 528 LSDNNISALP 537
           L  N I+++P
Sbjct: 263 LESNQITSIP 272



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)

Query: 32  FDEAGE-GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           +++ G+  D   E V L+ L L  N +E L   +  L  L  L +  N+++ +P  IG+L
Sbjct: 219 YNQIGQLPDSIGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNIGQL 278

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC-I 149
             L++L++  N + ++P  IG+   L K     N L+ LP  +G+  NL+    SNN  +
Sbjct: 279 CQLQTLNLDVNKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLTHLYLSNNKPL 338

Query: 150 TSLPEDLADCSKMSKLDVEG 169
             LP +L   S +  L ++G
Sbjct: 339 DLLPIELGMLSSLRFLGIDG 358



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           ++ L L+ NK+ D   + + +L  L  L + +N L+    D   ++  L+ LDLS N + 
Sbjct: 1   MKQLYLTYNKLTDI--SAIGNLRFLQTLVVKSNQLQGPIPDCIGNLTQLKTLDLSKNRLT 58

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            + EN     L  L    +   Q+ E P  I +L +L +L +  N L  +P    N   L
Sbjct: 59  KITENIGNCKL--LSRFLVDYNQIDELPKSIGQLSELTVLGIKYNCLSELPVTICNCEKL 116

Query: 524 TELDLSDNNISALPPELV 541
           TEL++  N+I+ LP  L+
Sbjct: 117 TELNIEGNHITQLPENLL 134


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|55628956|ref|XP_527815.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pan troglodytes]
          Length = 860

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 252/557 (45%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEI----SQLG---------NIRQLFFYNNYIENFPTDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  +P  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    K+ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 323 RELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHK-IENFRELRILILDK 381

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L+ L +L +++N ++ I  SIS   
Sbjct: 382 NLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLN 441

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N++  + +  C L  L  L ++ N +S 
Sbjct: 442 NICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISE 501

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L+ N L        SL+N      LKYL   L +N+  +   +  
Sbjct: 502 IPVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASIS 553

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++   +   +K            P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 554 NMISLHVLILCCNK--------FETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ 605

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L LS N+   +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I 
Sbjct: 606 KLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIR 664

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL
Sbjct: 665 EIPRN--IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSL 722

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 723 KEINFDDNPLLRPPMEI 739



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 253/570 (44%), Gaps = 57/570 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N +  L 
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-----------------------LDV 98
            +++ L  L +LNVSHN +S +P  I +L  ++                        L +
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPTDLECLGNLEILSL 264

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  IPD + S   L   +   NQL   P +L     L     + N I+SLP+++ +
Sbjct: 265 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRE 324

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N 
Sbjct: 325 LKNLETLLMDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNL 383

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + +IP  IS C  L    + +N L+ LP  + KL+ L  L ++ N + +       L  +
Sbjct: 384 LKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNI 443

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L+ S N ++ +P EI     + K+ L+ N +      L    +   L YL        
Sbjct: 444 CSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYL-------- 492

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSRNSIQEL 395
               S     +  +   +S + + L LE   N   I SE +     +  LDL +N I+++
Sbjct: 493 ----SVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKI 548

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q 
Sbjct: 549 PASISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQK 606

Query: 456 LDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           L+LS N     P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ I
Sbjct: 607 LNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI 666

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P     L +L  L   +N IS LPP L+S+
Sbjct: 667 PRNIGELRNLVSLHAYNNQISYLPPSLLSL 696



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 373 ELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVK 432

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N + ++P  +  C  +   + S N I   P  L     +  L
Sbjct: 433 ITDSISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYL 492

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 493 SVNGNYISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 551

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 552 ISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNLSS 611

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 612 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 666

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 667 ----PRNIGELRNLVSLHAYNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 717

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 718 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 750



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD+
Sbjct: 527 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDL 586

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLP 153
           S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T LP
Sbjct: 587 SENQLQKISSDICNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRLP 644

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L+
Sbjct: 645 GELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLN 703

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 704 LSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748


>gi|157128242|ref|XP_001661361.1| LAP4 protein (Scribble protein) (Smell-impaired protein) [Aedes
           aegypti]
 gi|108882248|gb|EAT46473.1| AAEL002336-PA, partial [Aedes aegypti]
          Length = 626

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 141/255 (55%), Gaps = 4/255 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ ELP  +G L  L+ L +  N + K+
Sbjct: 101 LESLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKL 160

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    LV  D S N+++ELP  +G   NL+D   S N +  LP+ ++  +K++ L 
Sbjct: 161 PPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTILK 220

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L+ N I     + ELI ++N LN +P TIG+++ L  L++ +N ++S+PS +
Sbjct: 221 LDQNRLHTLNEN-IGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSEL 279

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L    +  N L+ LP+ELG   +L  LD+  N+L+        L+L  + LS N 
Sbjct: 280 GNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVNLQLKAVWLSENQ 339

Query: 287 ---LSGLPPEIGKMT 298
              L    P+I ++T
Sbjct: 340 AQPLLTFQPDIDEVT 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 164/335 (48%), Gaps = 15/335 (4%)

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           LH L+ L +S N I+K+P +I +   LV+ D S N + ++P  +    +L     S+N I
Sbjct: 6   LHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPI 65

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
             LP   +    ++ L +    LT L  +     + L  L   +NLL  +PE+I  L+ L
Sbjct: 66  HRLPAGFSQLRNLTILGLNDMSLTSLPQDF-GCLSKLESLELRENLLKHLPESISQLTNL 124

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
            RLDL  N I  +P  +    +L E ++ +N L  LP E+G L  L  LD+  N+++E  
Sbjct: 125 ERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELP 184

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E   L  L+ L LS N L  LP  I K+T L  L L  N L TL  ++  G    + + 
Sbjct: 185 EEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTILKLDQNRLHTLNENI--GQCVNMQEL 242

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           +   L EN  +E   T  ++ TM   L+V          +L ++PSE+     +  L L 
Sbjct: 243 I---LTENFLNELPYTIGNM-TMLNNLNVDRN-------SLISVPSELGNCKNLGVLSLR 291

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
            N + +LP EL +C  L  L +S N+++  P +++
Sbjct: 292 ENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLV 326



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 167/371 (45%), Gaps = 39/371 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N I KL  D++N   L  L+VS N + ++P  I  L  L+ LD S N I ++
Sbjct: 9   LRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRL 68

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P        L     +   L  LP   G    L   +   N +  LPE ++  + + +LD
Sbjct: 69  PAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESISQLTNLERLD 128

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N++  L  +L      L EL    N L  +P  IG L  L+ LD+ +NR+  +P  I
Sbjct: 129 LGDNEIEELPPHL-GYLPALQELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEI 187

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNN 285
            G  +L + ++  N L  LP  + KL+KL  L L  N+L        Q + +  L L+ N
Sbjct: 188 GGLENLTDLHLSQNLLEVLPDGISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTEN 247

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP  IG MT L       N L   R+SL++ P                 SE    K
Sbjct: 248 FLNELPYTIGNMTML-------NNLNVDRNSLISVP-----------------SELGNCK 283

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                    L V    LSL    L+ +PSE+    E+  LD+S N +Q LP  L +   L
Sbjct: 284 --------NLGV----LSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVN-LQL 330

Query: 406 QTLILSRNKIK 416
           + + LS N+ +
Sbjct: 331 KAVWLSENQAQ 341



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 25/298 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L ++ N+I  + +D+++L  L +L+ S N +  LPA   +L  L  L ++  S+  
Sbjct: 31  NLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRLPAGFSQLRNLTILGLNDMSLTS 90

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA-------- 157
           +P + G  + L   +   N LK LP S+ +  NL      +N I  LP  L         
Sbjct: 91  LPQDFGCLSKLESLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQEL 150

Query: 158 --DCSKMSK-------------LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             D +++ K             LDV  N++  L    I     LT+L  S+NLL  +P+ 
Sbjct: 151 WLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEE-IGGLENLTDLHLSQNLLEVLPDG 209

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L++L  L L QNR+ ++  +I  C ++ E  +  N L+ LP  +G ++ L  L++  
Sbjct: 210 ISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDR 269

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N L     E    + L VL L  N L+ LP E+G    L  L ++GN L+ L  SLVN
Sbjct: 270 NSLISVPSELGNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVN 327



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 153/341 (44%), Gaps = 40/341 (11%)

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           +    L RL +L L  N I+ +PS I    +L E  +  N +  +P ++  L  L  LD 
Sbjct: 1   QNFFRLHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDF 60

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            SN +        QLR L++L L++ SL+ LP + G ++ L  L L  N L+ L  S+  
Sbjct: 61  SSNPIHRLPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESIS- 119

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L    R  L +NE  E       L  +        +EL L+   L  +P EI   
Sbjct: 120 ----QLTNLERLDLGDNEIEELPPHLGYLPAL--------QELWLDHNQLQKLPPEIGLL 167

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  LD+S N ++ELP E+    +L  L LS+N ++  PD I + L+ L+ LKLD N L
Sbjct: 168 KNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGI-SKLTKLTILKLDQNRL 226

Query: 440 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
                             L+ NI             ++QEL L    L E P  I  +  
Sbjct: 227 HT----------------LNENIGQCV---------NMQELILTENFLNELPYTIGNMTM 261

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  L++ +NSL S+P    N  +L  L L +N ++ LP EL
Sbjct: 262 LNNLNVDRNSLISVPSELGNCKNLGVLSLRENKLTKLPSEL 302


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 348

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++VT    SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 349 --CKNVTVT----SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 196/476 (41%), Gaps = 111/476 (23%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY-----------------------L 482
             ++ +L+  D S N + SLP  P    L  L+ L                        L
Sbjct: 300 IGNLSLLEEFDCSCNELESLP--PTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVTSL 357

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           R  +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 358 RSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLT----------------VLSNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT                V  NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 315

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 134/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L      NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 120/266 (45%), Gaps = 15/266 (5%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T          P  +  L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF---------PEEITQL 213

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +     +      TT    I     L    K L L G  L+ +P EI +   +  L LS 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNL----KALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQTLILSRNKI 415
           N +  LP E+    +LQTLIL  N I
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 114/262 (43%), Gaps = 41/262 (15%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDL+   L+ L  EIGK+  L+KL L  N L TL         P  +  LR+        
Sbjct: 58  LDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTL---------PEEIAQLRN-------- 100

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               + L L     + +P EIW+   +  LDL+ N +  LP E+
Sbjct: 101 -------------------LQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEI 141

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +    LQ L L  N++ + P  I T L +L  L L  N L  +P +    +  LQ L + 
Sbjct: 142 AQFQKLQWLSLDNNQLANLPQEI-TQLQNLELLFLSGNRLTTLPEE-IAQLRSLQRLYVY 199

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N   + PE    + L  LQ L L   QL   P +I RLQ L+ L L  N L  +PE   
Sbjct: 200 GNRFTTFPEE--ITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEIT 257

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L +L  L LS N ++ LP E+
Sbjct: 258 QLQNLQTLILSGNQLTTLPKEI 279



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L+L    L+ +P EI +   + +L LS N    LP E+    +LQ L L+ N++   P
Sbjct: 79  QKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLP 138

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
           + I      L  L LDNN L  +P +    +  L++L LS N + +LPE    + L  LQ
Sbjct: 139 EEI-AQFQKLQWLSLDNNQLANLPQE-ITQLQNLELLFLSGNRLTTLPEE--IAQLRSLQ 194

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LY+   +    P +I +LQ+L+ LDL  N L ++P+    L +L  L L  N ++ LP 
Sbjct: 195 RLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPE 254

Query: 539 ELVSV 543
           E+  +
Sbjct: 255 EITQL 259



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 453 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           LQ L+L  N + +LPE    + L +LQ L L   Q    P +I +LQ L+ LDL+ N L 
Sbjct: 78  LQKLNLGSNRLTTLPEE--IAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLT 135

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           ++PE       L  L L +N ++ LP E+  +
Sbjct: 136 TLPEEIAQFQKLQWLSLDNNQLANLPQEITQL 167


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 35/309 (11%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLD 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL     S N +T+LP+++     +  L +  N+LT+L       
Sbjct: 172 NNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL------- 224

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 225 -----------------PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 267

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 268 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 327

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 328 ELFLNNNQL 336



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+  NL     S N I ++P+++    K+  L ++ N+
Sbjct: 115 KLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L  L  S N L  +P+ IG L  L  L L  N++  +P+ I    +
Sbjct: 175 LTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + NN L+ L  E+ +L  L +LDL SNQL  +  E  QL+ L VLDL +N L+ L
Sbjct: 234 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 294 PEGIGQLKNLQTLDLDSNQLTTL 316



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L       N +T+LP+++     +  L++  N++  +    I     L  L  
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKLQKLQSLGL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL  NR+ ++P  I    +L + Y+ +N L+ LP E+G+
Sbjct: 171 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L
Sbjct: 231 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 151/330 (45%), Gaps = 63/330 (19%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L  N L+ LP EIG++  L+ L L+ N ++T+   +        L+ L+
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEK------LQKLQ 166

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                              L L+   L+ +P EI +   +  LDLS N
Sbjct: 167 S------------------------------LGLDNNQLTTLPQEIGQLQNLQSLDLSTN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+I
Sbjct: 197 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KEI 251

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
             LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N L
Sbjct: 252 EQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 290

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 291 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 320



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWW---------------EAVDLQKLILAHNNI 57
            LNLS   ++ +P E+     E  +  +W                +  +L+ L L++N I
Sbjct: 98  KLNLSANQIKTIPKEI-----EKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQI 152

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           + + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  +P EIG    L 
Sbjct: 153 KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQ 212

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                SNQL  LP+ +G+  NL      NN +T+L +++     +  LD+  N+LT+   
Sbjct: 213 DLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 272

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
             I     L  L    N L  +PE IG L  L  LDL  N++ ++P  I    +L E ++
Sbjct: 273 E-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFL 331

Query: 238 GNNALSA 244
            NN LS+
Sbjct: 332 NNNQLSS 338



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 66/362 (18%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L            
Sbjct: 39  DLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTIL------------ 86

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                       P+ IG L  L +L+L  N+I +IP  I     L   Y+  N L+ LP 
Sbjct: 87  ------------PKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQ 134

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++  L+ L L+
Sbjct: 135 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLS 194

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  + +L++              +DL  ++ +L++         
Sbjct: 195 TNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI--------- 223

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
                +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +P  I   L
Sbjct: 224 -----LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI-GQL 277

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +LQEL+L   
Sbjct: 278 KNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQ--EIGQLQNLQELFLNNN 334

Query: 486 QL 487
           QL
Sbjct: 335 QL 336


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|330793753|ref|XP_003284947.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
 gi|325085163|gb|EGC38576.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
          Length = 509

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 201/427 (47%), Gaps = 41/427 (9%)

Query: 47  LQKLILAHNNI--EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           L++L L++N +    L  +L +L  LT L++S N+L +LP  + +L  L+ LD+S N + 
Sbjct: 85  LKQLFLSNNKLFYTPLTPNLGSLKSLTRLDLSANQLDDLPVELSKLEALEYLDISDNQLQ 144

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P E G    L  F+CS N LK LP  +   + L +   SNN +T LP  +     +S 
Sbjct: 145 SFPLEFGKLYNLQVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQICLLGLLST 204

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+V  NK                        L  +PE + S+  L  LDL  N  L    
Sbjct: 205 LNVGFNK------------------------LQQVPEELSSMVSLTDLDLKVNPPLQYVP 240

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDL 282
            +S    L +  + N  ++ LP  LG LS+L  LD+  N QLKE   + A  + L  LDL
Sbjct: 241 QLSNLRQLKKLSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDL 300

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             N++  +P EIG +  L+ L L  N L     ++ N P+         +L  + +   +
Sbjct: 301 FGNNMRIVPREIGNLINLQHLDLRQNKL-----TIDNIPSEIGKLVNLKKLLLSNNLLVA 355

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
              E  I+    L    KE       L ++P+EI E   +TK++LS N +  +PP   + 
Sbjct: 356 LPPE--ISSMKAL----KEFEASNNQLQSVPAEIGELTGLTKINLSGNKLTSIPPSFGNL 409

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
           + L    L  N+I + P+  L  L + +   L +N L ++P + F D+  L ILD+ +N 
Sbjct: 410 SELVICDLKSNEIAELPNT-LNGLKACTKFDLSHNMLTELPWE-FGDLTGLTILDVGHNP 467

Query: 463 ASLPENP 469
            ++P NP
Sbjct: 468 LTIPPNP 474



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 232/476 (48%), Gaps = 24/476 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           ++++    + +LP  +G L   K L +S N ++ IP+EIG  + +   D S N++  +P 
Sbjct: 19  IVDLRKMNIDKLPPTVGALQC-KELLLSENDLITIPEEIGKLSKVEIIDFSKNRINYIPP 77

Query: 132 SLGRCLNLSDFKASNNCI--TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            +G    L     SNN +  T L  +L     +++LD+  N+L  L   L +    L  L
Sbjct: 78  EIGSLSTLKQLFLSNNKLFYTPLTPNLGSLKSLTRLDLSANQLDDLPVEL-SKLEALEYL 136

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L   P   G L  L   +  +N + S+P  ISG   L E  + NN L+ LP ++
Sbjct: 137 DISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQI 196

Query: 250 GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L  L TL++  N+L++   E +  + L+ LDL  N      P++  +  L+KL     
Sbjct: 197 CLLGLLSTLNVGFNKLQQVPEELSSMVSLTDLDLKVNPPLQYVPQLSNLRQLKKL----- 251

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            +R L+ + +    P  L  L S L E +  +    KE    +AT +++  ++L L G N
Sbjct: 252 SIRNLQITHL----PLGLGLL-SELIELDIRDNPQLKEIPYDIATLINL--QKLDLFGNN 304

Query: 369 LSAIPSEIWEAGEITKLDLSRN--SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           +  +P EI     +  LDL +N  +I  +P E+    +L+ L+LS N +   P  I +S+
Sbjct: 305 MRIVPREIGNLINLQHLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLVALPPEI-SSM 363

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L   +  NN L+ VP++   ++  L  ++LS N + S+P  P F +L  L    L+  
Sbjct: 364 KALKEFEASNNQLQSVPAE-IGELTGLTKINLSGNKLTSIP--PSFGNLSELVICDLKSN 420

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           ++ E P  +  L+     DLS N L  +P  F +LT LT LD+  N ++  P  +V
Sbjct: 421 EIAELPNTLNGLKACTKFDLSHNMLTELPWEFGDLTGLTILDVGHNPLTIPPNPIV 476



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 51/361 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            N S  SL+ +P          GE   W   V LQ+L +++N +  L   +  L LL+ L
Sbjct: 159 FNCSKNSLKSLP----------GEISGW---VKLQELNVSNNQLTFLPNQICLLGLLSTL 205

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFN-----------------------SIMKIPDEI 110
           NV  NKL ++P  +  +  L  LD+  N                        I  +P  +
Sbjct: 206 NVGFNKLQQVPEELSSMVSLTDLDLKVNPPLQYVPQLSNLRQLKKLSIRNLQITHLPLGL 265

Query: 111 GSATALVKFDCSSN-QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           G  + L++ D   N QLKE+P  +   +NL       N +  +P ++ +   +  LD+  
Sbjct: 266 GLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREIGNLINLQHLDLRQ 325

Query: 170 NKLTVLSNNL---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           NKLT+  +N+   I     L +L+ S NLL  +P  I S+  L   +   N++ S+P+ I
Sbjct: 326 NKLTI--DNIPSEIGKLVNLKKLLLSNNLLVALPPEISSMKALKEFEASNNQLQSVPAEI 383

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-----CVEACQLRLSVLD 281
                L +  +  N L+++P   G LS+L   DL SN++ E       ++AC    +  D
Sbjct: 384 GELTGLTKINLSGNKLTSIPPSFGNLSELVICDLKSNEIAELPNTLNGLKAC----TKFD 439

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS+N L+ LP E G +T L  L +  NPL    + +V   T  ++++L+    E    + 
Sbjct: 440 LSHNMLTELPWEFGDLTGLTILDVGHNPLTIPPNPIVMKGTETIIQWLKKNEKEGRKGKV 499

Query: 342 S 342
           S
Sbjct: 500 S 500



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 164/390 (42%), Gaps = 104/390 (26%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           +DL +  I  +P ++ G     E  +  N L  +P E+GKLSK+                
Sbjct: 20  VDLRKMNIDKLPPTV-GALQCKELLLSENDLITIPEEIGKLSKV---------------- 62

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                  ++D S N ++ +PPEIG ++TL++L L+ N                  K   +
Sbjct: 63  ------EIIDFSKNRINYIPPEIGSLSTLKQLFLSNN------------------KLFYT 98

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELS----LEGMNLS-----AIPSEIWEAGEI 382
            L  N  S  S T+ DL   A +L     ELS    LE +++S     + P E  +   +
Sbjct: 99  PLTPNLGSLKSLTRLDL--SANQLDDLPVELSKLEALEYLDISDNQLQSFPLEFGKLYNL 156

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
              + S+NS++ LP E+S    LQ L +S N++   P+ I   L  LS L +  N L+QV
Sbjct: 157 QVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQICL-LGLLSTLNVGFNKLQQV 215

Query: 443 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ---------------- 486
           P +    +  L  LDL  N   L   P  S+L  L++L +R +Q                
Sbjct: 216 PEE-LSSMVSLTDLDLKVN-PPLQYVPQLSNLRQLKKLSIRNLQITHLPLGLGLLSELIE 273

Query: 487 --------LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS---- 534
                   L+E P DI  L  L+ LDL  N+++ +P    NL +L  LDL  N ++    
Sbjct: 274 LDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREIGNLINLQHLDLRQNKLTIDNI 333

Query: 535 ---------------------ALPPELVSV 543
                                ALPPE+ S+
Sbjct: 334 PSEIGKLVNLKKLLLSNNLLVALPPEISSM 363


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G T                                   + +EL     
Sbjct: 286 NQLMYLPDS-IGGLT-----------------------------------SIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLTSIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLEILPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
            L  + L+ N  + L    + +        L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQPRTED 435



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 20/281 (7%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T LN+S   L+ L + I +L  L  LD+  N +  +P EIG  + L + +   NQLK L
Sbjct: 18  VTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKVL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LT 187
           P  + +  NL++     N +  LP ++   S +++LD++ N+L+ L + +   W +  L 
Sbjct: 78  PPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEI---WQLFNLK 134

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           E     N L+ +P  IG LS L +L L  N++  +P  I    +L + Y+ +N L+ LP 
Sbjct: 135 EFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLPP 194

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+LS L  L L +NQL     E   L  L  L+L  N LS LPPEIG +  L  ++L 
Sbjct: 195 EIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILE 254

Query: 307 GNPLRTLRSSLVNG------PTPALLK--------YLRSRL 333
            NP       L  G      P P +LK        YLR +L
Sbjct: 255 ENPEEWWYDGLYLGGNPLTSPPPEILKQGIDATLAYLREQL 295



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 122/262 (46%), Gaps = 29/262 (11%)

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L++L RLDL+ N++ ++PS I     L    +G+N L  LP E+ +LS L  LDL  
Sbjct: 35  IRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKVLPPEIWQLSNLTELDLWG 94

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQLK    E  QL  L+ LDL +N LS LP EI ++  L++  L GN L  L   +  G 
Sbjct: 95  NQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVGNQLSVLPPEI--GQ 152

Query: 322 TPALLK-YLRSR----LPENEDSEASTTKEDLITMATRLSVTS---------KELSLEGM 367
              L K YL++     LP      ++ TK  L     +L+V            EL L+  
Sbjct: 153 LSNLTKLYLQNNQLTVLPPEIGQLSNLTK--LYLQDNQLTVLPPEIGELSNLTELYLQNN 210

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            LS +P EI     + +L+L  N +  LPPE+     L  +IL  N  + W D       
Sbjct: 211 QLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILEENPEEWWYDG------ 264

Query: 428 SLSCLKLDNNPLRQVPSDGFKD 449
               L L  NPL   P +  K 
Sbjct: 265 ----LYLGGNPLTSPPPEILKQ 282



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 125/288 (43%), Gaps = 63/288 (21%)

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           ++ +L+L    L     E  QL +L+ LDL NN LS LP EIG+++ L +L L  N L+ 
Sbjct: 17  QVTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKV 76

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L                    PE             I   + L+    EL L G  L  +
Sbjct: 77  LP-------------------PE-------------IWQLSNLT----ELDLWGNQLKVL 100

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EIW+   +T+LDL  N +  LP E+    +L+   L  N++   P  I   LS+L+ L
Sbjct: 101 PPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVGNQLSVLPPEI-GQLSNLTKL 159

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 492
            L NN L  +P                         P    L +L +LYL+  QL   P 
Sbjct: 160 YLQNNQLTVLP-------------------------PEIGQLSNLTKLYLQDNQLTVLPP 194

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +I  L  L  L L  N L  +P    NLT L EL+L  N +SALPPE+
Sbjct: 195 EIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEI 242


>gi|90399332|emb|CAH68341.1| H0313F03.16 [Oryza sativa Indica Group]
          Length = 1174

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 229/493 (46%), Gaps = 75/493 (15%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSI- 103
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 104 MKIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   +  +     LT L    N L+G +PE IG+L++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRRVGQLGNLTVLQLQGNALSGEIPEEIGNLTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L  + PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGMFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L    +  + G   A +  ++  L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRL----AGAIPGAVIASMSNVQMYL-- 624

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A T                           AIP+EI     +  +DLS N +   
Sbjct: 625 NLSNNAFT--------------------------GAIPAEIGGLVMVQTIDLSNNQLSGG 658

Query: 395 LPPELSSCASLQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPL-RQVPSDGFKDIPM 452
           +P  L+ C +L +L LS N +  + P  +   L  L+ L +  N L  ++P+D       
Sbjct: 659 VPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPAD------- 711

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ 511
                              ++L H+Q L + R     A P  +  L  LR L+LS N+ +
Sbjct: 712 ------------------IAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFE 753

Query: 512 S-IPEG--FKNLT 521
             +P+G  F NLT
Sbjct: 754 GPVPDGGVFGNLT 766



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 226/505 (44%), Gaps = 57/505 (11%)

Query: 64  LRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           L N+  L V++++ N  +  +P  +G L  L+ L VS N     IP  + + +A+     
Sbjct: 109 LGNISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALAL 168

Query: 122 SSNQL-KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + N L   +PS +G   NL  F+A  NN    LP  +A    +  +D+  N+L+      
Sbjct: 169 NVNNLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLS------ 222

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMG 238
                              +P  IG LS L  L L++NR    IP  +  C +L    + 
Sbjct: 223 -----------------GSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCKNLTLLNIF 265

Query: 239 NNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL--DLSNNSLSG-LPPEI 294
           +N  +  +P ELG+L+ L  + L+ N L      + +  +S+L  DLS N L+G +PPE+
Sbjct: 266 SNGFTGEIPGELGELTNLEVMRLYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPEL 325

Query: 295 GKMTTLRKLLLTGNPLR-TLRSSLVN---------------GPTPALLKYLRS--RLPEN 336
           G++ +L++L L  N L  T+ +SL N               GP PA +  LR+  RL   
Sbjct: 326 GELPSLQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQ 385

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-EL 395
            +S +       I+  T+L+  S   +L       +P+ +     +  L L +NS+  ++
Sbjct: 386 NNSLSGQIPAS-ISNCTQLANASMSFNLFS---GPLPAGLGRLQSLMFLSLGQNSLAGDI 441

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P +L  C  LQ L LS N         +  L +L+ L+L  N L     +   ++  L  
Sbjct: 442 PDDLFDCGQLQKLDLSENSFTGGLSRRVGQLGNLTVLQLQGNALSGEIPEEIGNLTKLIS 501

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-I 513
           L L  N  +       S++  LQ L L   +L    P ++  L+QL IL    N     I
Sbjct: 502 LKLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGMFPAEVFELRQLTILGAGSNRFAGPI 561

Query: 514 PEGFKNLTSLTELDLSDNNISALPP 538
           P+   NL SL+ LDLS N ++   P
Sbjct: 562 PDAVANLRSLSFLDLSSNMLNGTVP 586



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 229/527 (43%), Gaps = 82/527 (15%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           GP PA L  L+S   L   ++S A    +DL        +   E S  G     +   + 
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTG----GLSRRVG 470

Query: 378 EAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           + G +T L L  N++  E+P E+ +   L +L L RN+      A ++++SSL  L L +
Sbjct: 471 QLGNLTVLQLQGNALSGEIPEEIGNLTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGH 530

Query: 437 NPL-RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L    P++ F ++  L IL    N  + P                        P  + 
Sbjct: 531 NRLDGMFPAEVF-ELRQLTILGAGSNRFAGP-----------------------IPDAVA 566

Query: 496 RLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELV 541
            L+ L  LDLS N L  ++P     L  L  LDLS N ++   P  V
Sbjct: 567 NLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAV 613



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 63/332 (18%)

Query: 39  DKWWEAVDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSL 96
           D  ++   LQKL L+ N+    L   +  L  LTVL +  N LS E+P  IG L  L SL
Sbjct: 443 DDLFDCGQLQKLDLSENSFTGGLSRRVGQLGNLTVLQLQGNALSGEIPEEIGNLTKLISL 502

Query: 97  DVSFNSIM-KIPDEIGSATALVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITS-LP 153
            +  N     +P  I + ++L   D   N+L  + P+ +     L+   A +N     +P
Sbjct: 503 KLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGMFPAEVFELRQLTILGAGSNRFAGPIP 562

Query: 154 EDLADCSKMSKLDVEGNKL--TV--------------LSNNLIASWTMLTELIAS----- 192
           + +A+   +S LD+  N L  TV              LS+N +A   +   +IAS     
Sbjct: 563 DAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAG-AIPGAVIASMSNVQ 621

Query: 193 ------KNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA 244
                  N   G +P  IG L  +  +DL  N++   +P++++GC +L    +  N+L+ 
Sbjct: 622 MYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTG 681

Query: 245 --------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
                                     +PA++  L  + TLD+  N        A      
Sbjct: 682 ELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTA 741

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 742 LRSLNLSSNTFEGPVPDGGVFGNLTMSSLQGN 773



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 45/287 (15%)

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVN--------------- 319
           L V+DL++N+ +G +PP++G++  L +L+++ N     + SSL N               
Sbjct: 115 LQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLT 174

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
           G  P+ +  L S L   E    +   E   +MA    +   +LS   ++  +IP EI + 
Sbjct: 175 GAIPSCIGDL-SNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLS-GSIPPEIGDL 232

Query: 380 GEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             +  L L  N     +P EL  C +L  L +  N         L  L++L  ++L  N 
Sbjct: 233 SNLQILQLYENRFSGHIPRELGRCKNLTLLNIFSNGFTGEIPGELGELTNLEVMRLYKNA 292

Query: 439 L-RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           L  ++P    + + +L  LDLS N  + P  P    LP LQ L L   +L          
Sbjct: 293 LTSEIPRSLRRCVSLLN-LDLSMNQLAGPIPPELGELPSLQRLSLHANRLA--------- 342

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA-LPPELVSV 543
                         ++P    NL +LT L+LS+N++S  LP  + S+
Sbjct: 343 -------------GTVPASLTNLVNLTILELSENHLSGPLPASIGSL 376


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 2/271 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L +  N +  L   L +LP L  L +  N+L+ LPA IG L  L+   V  N + 
Sbjct: 75  VNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLT 134

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +     L   + + NQL  L   +G+   L    A +N +T+LPE L   + ++ 
Sbjct: 135 SLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTH 194

Query: 165 -LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L +  N+LT LS +L A  T L  L  + N L  +P ++G L+ L  L ++ N++ ++P
Sbjct: 195 YLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLP 254

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             +    +L E +  NN L  LP  LGKL +L  L L +N+L        +L  L+ LDL
Sbjct: 255 EELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDL 314

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            NN L+ LP  +  +  LR L L  N L TL
Sbjct: 315 RNNLLASLPASLDNLAKLRALDLRANRLTTL 345



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 183/384 (47%), Gaps = 43/384 (11%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D + N+L  LP  LG    L +    +N IT+LP  L     +  L V+ N+L+VL   
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVL--- 90

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P ++  L RL  L L++NR+ ++P+ I     L +F +G
Sbjct: 91  ---------------------PSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVG 129

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N L++LP  L +L +L  L+L  NQL        QL +L +LD  +N L+ LP  +G++
Sbjct: 130 KNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQL 189

Query: 298 TTL-RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           T L   L L+ N L TL  SL    T   L YL   + +N+ +E   +   L  +     
Sbjct: 190 TNLTHYLYLSNNRLTTLSESLFAHLTQ--LAYLN--ITDNQLTELPRSLGCLTNL----- 240

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              KEL +    L+ +P E+     + +L    N ++ LP  L     L+ L L+ N++ 
Sbjct: 241 ---KELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLA 297

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 475
             P   L  L++L+ L L NN L  +P+    ++  L+ LDL  N + +LP  P    L 
Sbjct: 298 RLP-TYLGELANLTSLDLRNNLLASLPAS-LDNLAKLRALDLRANRLTTLP--PGLQRLQ 353

Query: 476 HLQELYLRRMQLREAPTDILRLQQ 499
           HL++L LR ++L   PT + +L+Q
Sbjct: 354 HLEKLDLRWLKLSPLPTWLDQLEQ 377



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 163/374 (43%), Gaps = 63/374 (16%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N +  L E+L +L  L  L +  N+++ LP  +G+L  L++L V  N +  +P  + 
Sbjct: 36  LTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLY 95

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       N+L  LP+ +GR   L DF    N +TSLPE L +  ++  L++  N+
Sbjct: 96  HLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQ 155

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L+ LS                        E IG L++L  LD   N++ ++P S+    +
Sbjct: 156 LSSLS------------------------ERIGQLTQLQMLDAGHNQLTTLPESLGQLTN 191

Query: 232 LAEF-YMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLS 288
           L  + Y+ NN L+ L   L   L++L  L++  NQL E      C   L  L + NN L+
Sbjct: 192 LTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLA 251

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP E+G +  LR+L    N L TL  SL        LK LR                  
Sbjct: 252 TLPEELGNLAALRELHAMNNRLETLPDSL------GKLKQLR------------------ 287

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
                       EL L    L+ +P+ + E   +T LDL  N +  LP  L + A L+ L
Sbjct: 288 ------------ELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRAL 335

Query: 409 ILSRNKIKDWPDAI 422
            L  N++   P  +
Sbjct: 336 DLRANRLTTLPPGL 349



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 3/221 (1%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSF 100
           WE   LQ L LA N +  L E +  L  L +L+  HN+L+ LP ++G+L ++   L +S 
Sbjct: 141 WELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSN 200

Query: 101 NSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  + + +    T L   + + NQL ELP SLG   NL + +  NN + +LPE+L + 
Sbjct: 201 NRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNL 260

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + + +L    N+L  L ++L      L EL  + N L  +P  +G L+ L  LDL  N +
Sbjct: 261 AALRELHAMNNRLETLPDSL-GKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLL 319

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            S+P+S+     L    +  N L+ LP  L +L  L  LDL
Sbjct: 320 ASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDL 360



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 156/334 (46%), Gaps = 23/334 (6%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR+ ++P  +     L E Y+ +N ++ LP  LGKL  L  L +  N+L      
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSS 93

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYL 329
              L RL  L L  N L+ LP +IG++  LR   +  N L +L  SL   G   AL    
Sbjct: 94  LYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQAL---- 149

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITK-LDL 387
              L EN+ S  S    + I   T+L +        G N L+ +P  + +   +T  L L
Sbjct: 150 --NLAENQLSSLS----ERIGQLTQLQMLDA-----GHNQLTTLPESLGQLTNLTHYLYL 198

Query: 388 SRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           S N +  L   L +    L  L ++ N++ + P + L  L++L  L++ NN L  +P + 
Sbjct: 199 SNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRS-LGCLTNLKELRIYNNQLATLPEEL 257

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                + ++  ++  + +LP++     L  L+EL L   +L   PT +  L  L  LDL 
Sbjct: 258 GNLAALRELHAMNNRLETLPDS--LGKLKQLRELRLANNRLARLPTYLGELANLTSLDLR 315

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L S+P    NL  L  LDL  N ++ LPP L
Sbjct: 316 NNLLASLPASLDNLAKLRALDLRANRLTTLPPGL 349



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 25/210 (11%)

Query: 48  QKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
             L L++N +  L E L  +L  L  LN++ N+L+ELP ++G L  LK L +  N +  +
Sbjct: 194 HYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATL 253

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+G+  AL +    +N+L+ LP SLG+   L + + +NN +  LP  L + + ++ LD
Sbjct: 254 PEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLD 313

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                   L NNL+AS                +P ++ +L++L  LDL  NR+ ++P  +
Sbjct: 314 --------LRNNLLAS----------------LPASLDNLAKLRALDLRANRLTTLPPGL 349

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLG 256
                L +  +    LS LP  L +L + G
Sbjct: 350 QRLQHLEKLDLRWLKLSPLPTWLDQLEQRG 379



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L++L + +N +  L E+L NL  L  L+  +N+L  LP ++G+L  L+ L ++ N + 
Sbjct: 238 TNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLA 297

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P  +G    L   D  +N L  LP+SL     L       N +T+LP  L     + K
Sbjct: 298 RLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEK 357

Query: 165 LDVEGNKLTVL 175
           LD+   KL+ L
Sbjct: 358 LDLRWLKLSPL 368



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 30/189 (15%)

Query: 378 EAGEITK-------------------------LDLSRNSIQELPPELSSCASLQTLILSR 412
           E GE+T+                         LDL+ N +  LP EL S   LQ L L  
Sbjct: 2   ENGEVTRLSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEELGSLEQLQELYLDD 61

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
           N+I   P  +L  L +L  L +D N L  +PS  +  +P L+ L L  N + +LP +   
Sbjct: 62  NQITTLPH-VLGKLVNLRALHVDMNRLSVLPSSLYH-LPRLETLRLYKNRLTNLPAD--I 117

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L  L++  + + QL   P  +  L +L+ L+L++N L S+ E    LT L  LD   N
Sbjct: 118 GRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHN 177

Query: 532 NISALPPEL 540
            ++ LP  L
Sbjct: 178 QLTTLPESL 186



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            L++L LA+N + +L   L  L  LT L++ +N L+ LPA++  L  L++LD+  N +  
Sbjct: 285 QLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTT 344

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL 133
           +P  +     L K D    +L  LP+ L
Sbjct: 345 LPPGLQRLQHLEKLDLRWLKLSPLPTWL 372


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 207/445 (46%), Gaps = 78/445 (17%)

Query: 2   DRILKAAR--TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           +R++  AR   +  L+LS+  L D+P+ +                  L+ L L+ N + +
Sbjct: 11  ERLINIARLQEAAELDLSDIGLSDLPDSIGS-------------LSQLKSLYLSENELMR 57

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L  L  L VL+++ N+L  L   +G L  L+SLD++ N+++++P+ IG+ + L   
Sbjct: 58  LPKALGQLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSL 117

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + +SNQL  LPSS+G+  NL + + S N +   PE+L   + +  L++    L    N +
Sbjct: 118 NLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGL----NEI 173

Query: 180 IASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
             +W  L  L +   S N L  +PE +G+L+ L  LDL  N+                  
Sbjct: 174 PPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQ------------------ 215

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
                LS LPA LG L+ L +LD+ SNQL+    + C L  L+ L   NN L+ LP   G
Sbjct: 216 -----LSELPAALGSLTPLTSLDIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWG 270

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L  L + GN +R L  S+  G    L +++ +  P+                    
Sbjct: 271 RLAALTTLGIAGNRIRQLPESI--GELQNLKQFIFNLDPD-------------------- 308

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                    + + L   P+ +     + +L      ++ LPP +     L++L +S N +
Sbjct: 309 ---------QPVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNL 359

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLR 440
            D P + L +L +L  L L NNPLR
Sbjct: 360 TDLPLS-LGTLDNLKTLNLSNNPLR 383



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 31/387 (8%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           ++A   + ++LD+    L+ L ++ I S + L  L  S+N L  +P+ +G L++L  LDL
Sbjct: 15  NIARLQEAAELDLSDIGLSDLPDS-IGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDL 73

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +NR+  +   +     L    +  NAL  LP  +G  S+L +L+L SNQL        +
Sbjct: 74  ARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGK 133

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L  L LS NS++  P E+G +T LR L +T   L  +         P   + L    
Sbjct: 134 LKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEI---------PPAWRSLEGLE 184

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
             N       T  + +   T L    + L L    LS +P+ +     +T LD+  N +Q
Sbjct: 185 SLNLSFNHLKTLPEWLGTLTDL----RSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQ 240

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LPP++ +  +L +L+   N++   P+A    L++L+ L +  N +RQ+P    + I  L
Sbjct: 241 SLPPQICNLVNLTSLLAYNNQLTHLPEA-WGRLAALTTLGIAGNRIRQLP----ESIGEL 295

Query: 454 QIL-DLSYNIASLPENP-PFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILD 504
           Q L    +N+   P+ P P    P        L++L     +LR  P  I  L QL+ L+
Sbjct: 296 QNLKQFIFNLD--PDQPVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLN 353

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDN 531
           +S N+L  +P     L +L  L+LS+N
Sbjct: 354 VSHNNLTDLPLSLGTLDNLKTLNLSNN 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 28/351 (7%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P++IGSLS+L  L L +N ++ +P ++     L    +  N L  L   LG LS+L
Sbjct: 32  LSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDVLGYLSQL 91

Query: 256 GTLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +LDL  N   +L E+     QLR   L+L++N L  LP  IGK+  L++L L+ N +  
Sbjct: 92  QSLDLTGNALVELPEFIGAFSQLR--SLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQ 149

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
               L       LL  LRS        E ++T  + I  A R     + L+L   +L  +
Sbjct: 150 WPEEL------GLLTGLRSL-------EITSTGLNEIPPAWRSLEGLESLNLSFNHLKTL 196

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  +    ++  LDLS N + ELP  L S   L +L +  N+++  P  I  +L +L+ L
Sbjct: 197 PEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQSLPPQI-CNLVNLTSL 255

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL-----RRMQ 486
              NN L  +P + +  +  L  L ++ N I  LPE+     L +L++        + + 
Sbjct: 256 LAYNNQLTHLP-EAWGRLAALTTLGIAGNRIRQLPES--IGELQNLKQFIFNLDPDQPVP 312

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L+  P  +   + L  L      L+S+P     LT L  L++S NN++ LP
Sbjct: 313 LQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLP 363



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 120/266 (45%), Gaps = 43/266 (16%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS+  LS LP  IG ++ L+ L L+ N L  L  +L       +L   R+RLP     
Sbjct: 25  LDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLP----- 79

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                  D++   ++L    + L L G  L  +P  I    ++  L+L+ N +  LP  +
Sbjct: 80  ----ILTDVLGYLSQL----QSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSI 131

Query: 400 SSCASLQTLILSRNKIKDWPD--AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
               +LQ L LS N +  WP+   +LT L SL           ++ S G  +IP      
Sbjct: 132 GKLKNLQELQLSYNSMAQWPEELGLLTGLRSL-----------EITSTGLNEIP------ 174

Query: 458 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
                      P + SL  L+ L L    L+  P  +  L  LR LDLS N L  +P   
Sbjct: 175 -----------PAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAAL 223

Query: 518 KNLTSLTELDLSDNNISALPPELVSV 543
            +LT LT LD+  N + +LPP++ ++
Sbjct: 224 GSLTPLTSLDIQSNQLQSLPPQICNL 249



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 28/135 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN--- 101
           V+L  L+  +N +  L E    L  LT L ++ N++ +LP +IGEL  LK    + +   
Sbjct: 250 VNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESIGELQNLKQFIFNLDPDQ 309

Query: 102 -------------------------SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
                                     +  +P  IG  T L   + S N L +LP SLG  
Sbjct: 310 PVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTL 369

Query: 137 LNLSDFKASNNCITS 151
            NL     SNN + S
Sbjct: 370 DNLKTLNLSNNPLRS 384


>gi|449672104|ref|XP_004207635.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Hydra
           magnipapillata]
          Length = 674

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 217/471 (46%), Gaps = 58/471 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ LIL HN +  L  D+  L +L  L++  N+L+EL  +   L  L+ L+++ N +  +
Sbjct: 48  LKFLILDHNILTSLPFDINKLVMLRKLSIVGNELTELSHSFSSLLYLEELNLNENLLTVL 107

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG   +L  F    N L+ LP S+ +  +L +     N I+ LP   +    +  LD
Sbjct: 108 PSDIGKLQSLQIFSAIGNNLRSLPPSITQLESLKELHLDENKISYLPSKFSGLKSLIVLD 167

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  L  + I S   L  L  + NLL  +P++  +LS L  LDL  N I  +P ++
Sbjct: 168 ILNNCLEELPID-IGSVKTLQILNCNGNLLRSLPDSFSNLSSLKFLDLGSNNIDELPETL 226

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVEACQLRLSVL 280
           S   ++ + ++ NN L  +P    +L  L  L +H N+L+       +C ++C L+L  +
Sbjct: 227 SCAKTIEKLFLENNMLKIVPLWFHELHSLEELSIHDNELQHQPFDNLFC-KSC-LKLKKI 284

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +   N +  LPP  G +T L  L L        RS   NG                    
Sbjct: 285 EAGANFIFSLPPHFGSLTNLDYLHLGSTKSELERSHFQNG-------------------N 325

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             TT  D     ++L    K+L++    +  +P +  E   +T LDL +N ++ LPP   
Sbjct: 326 WITTLPDSFCELSKL----KKLNINENQIELLPLQFGELKSLTWLDLGQNMLRVLPPSFC 381

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
              +L+ L LS+N + + P+    +L +L  L+LDNN L+++P    ++I  LQ LDL +
Sbjct: 382 ELTNLEFLQLSKNMLVELPEN-FGNLKNLKDLRLDNNCLKKLPI-SIENILGLQCLDLFH 439

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           N                         L E P  + +L+++  LDL QN  Q
Sbjct: 440 N------------------------NLTEMPMFVFKLKKIIRLDLDQNLFQ 466



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 198/452 (43%), Gaps = 56/452 (12%)

Query: 115 ALVKFDCSSNQLKELPSSLGR--CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           +  + D SS  ++E+P SL       L      +N +TSLP D+     + KL + GN+L
Sbjct: 22  SCFELDISSYDIEEIPHSLFNLPTNRLKFLILDHNILTSLPFDINKLVMLRKLSIVGNEL 81

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T LS++  +S   L EL  ++NLL  +P  IG L  L       N + S+P SI+   SL
Sbjct: 82  TELSHSF-SSLLYLEELNLNENLLTVLPSDIGKLQSLQIFSAIGNNLRSLPPSITQLESL 140

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 292
            E ++  N +S LP++   L  L                       VLD+ NN L  LP 
Sbjct: 141 KELHLDENKISYLPSKFSGLKSL----------------------IVLDILNNCLEELPI 178

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITM 351
           +IG + TL+ L   GN LR+L  S  N  +   L    + + E  E    + T E L   
Sbjct: 179 DIGSVKTLQILNCNGNLLRSLPDSFSNLSSLKFLDLGSNNIDELPETLSCAKTIEKLFLE 238

Query: 352 ATRLSVTS---------KELSLEGMNLSAIPSE---IWEAGEITKLDLSRNSIQELPPEL 399
              L +           +ELS+    L   P +        ++ K++   N I  LPP  
Sbjct: 239 NNMLKIVPLWFHELHSLEELSIHDNELQHQPFDNLFCKSCLKLKKIEAGANFIFSLPPHF 298

Query: 400 SSCASLQTLILSRNKIK---------DW----PDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            S  +L  L L   K +         +W    PD+    LS L  L ++ N +  +P   
Sbjct: 299 GSLTNLDYLHLGSTKSELERSHFQNGNWITTLPDS-FCELSKLKKLNINENQIELLPLQ- 356

Query: 447 FKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           F ++  L  LDL  N+   LP  P F  L +L+ L L +  L E P +   L+ L+ L L
Sbjct: 357 FGELKSLTWLDLGQNMLRVLP--PSFCELTNLEFLQLSKNMLVELPENFGNLKNLKDLRL 414

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +P   +N+  L  LDL  NN++ +P
Sbjct: 415 DNNCLKKLPISIENILGLQCLDLFHNNLTEMP 446



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 68/146 (46%), Gaps = 26/146 (17%)

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP ++    SLQ      N ++  P +I T L SL  L LD N +  +PS  F  +  L 
Sbjct: 107 LPSDIGKLQSLQIFSAIGNNLRSLPPSI-TQLESLKELHLDENKISYLPS-KFSGLKSLI 164

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           +LD+  N                         L E P DI  ++ L+IL+ + N L+S+P
Sbjct: 165 VLDILNNC------------------------LEELPIDIGSVKTLQILNCNGNLLRSLP 200

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           + F NL+SL  LDL  NNI  LP  L
Sbjct: 201 DSFSNLSSLKFLDLGSNNIDELPETL 226



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E   L+KL +  N IE L      L  LT L++  N L  LP +  EL  L+ L +
Sbjct: 332 DSFCELSKLKKLNINENQIELLPLQFGELKSLTWLDLGQNMLRVLPPSFCELTNLEFLQL 391

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N ++++P+  G+   L      +N LK+LP S+   L L      +N +T +P  +  
Sbjct: 392 SKNMLVELPENFGNLKNLKDLRLDNNCLKKLPISIENILGLQCLDLFHNNLTEMPMFVFK 451

Query: 159 CSKMSKLDVEGN 170
             K+ +LD++ N
Sbjct: 452 LKKIIRLDLDQN 463



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 3/150 (2%)

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILT-SLSSLSCLKLDNNPLRQVPSDGFKDI 450
           +Q L     +  S   L +S   I++ P ++     + L  L LD+N L  +P D  K +
Sbjct: 10  VQNLFETFKNDESCFELDISSYDIEEIPHSLFNLPTNRLKFLILDHNILTSLPFDINKLV 69

Query: 451 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            + ++  +   +  L  +  FSSL +L+EL L    L   P+DI +LQ L+I     N+L
Sbjct: 70  MLRKLSIVGNELTELSHS--FSSLLYLEELNLNENLLTVLPSDIGKLQSLQIFSAIGNNL 127

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +S+P     L SL EL L +N IS LP + 
Sbjct: 128 RSLPPSITQLESLKELHLDENKISYLPSKF 157


>gi|402864263|ref|XP_003896392.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Papio anubis]
          Length = 863

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 253/576 (43%), Gaps = 57/576 (9%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHN 55
             + + ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N
Sbjct: 142 TCKDNFTVNLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGADSGDLLGLEILSLQEN 201

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-------------------- 95
            +  L  ++R L  L +LNVSHN +S +P  I +L  ++                     
Sbjct: 202 GLSSLPSEIRLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGN 261

Query: 96  ---LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
              L +  N +  IPD + S   L   +   NQL   P +L     L     + N I+SL
Sbjct: 262 LEILSLGKNKLRHIPDTLPSLKYLRVLNLQYNQLTIFPKALCFLPKLISLDLTGNLISSL 321

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++ +   +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L
Sbjct: 322 PKEIRELKNLETLLLDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRIL 380

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N + +IP  I  C  L    + +N L+ LP  + KL+ L  L ++ N + +     
Sbjct: 381 MLDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI 440

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L  +  L+ S N ++G+P EI     + K+ L  N +      L    +   L YL  
Sbjct: 441 SHLNNICSLEFSGNIIAGVPIEIKNCQKIIKIELNYNKIMYFPLGLCALDS---LYYL-- 495

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSR 389
                     S     +  +   +S + + L LE   N   I SE +     +  LDL +
Sbjct: 496 ----------SVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGK 545

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N I+++P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   +
Sbjct: 546 NQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSD-ICN 603

Query: 450 IPMLQILDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +  +Q L+ S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S 
Sbjct: 604 LKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISN 663

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N+++ IP     L +L  L   +N IS +PP L+S+
Sbjct: 664 NAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSL 699



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 181/408 (44%), Gaps = 19/408 (4%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++ + +++L LA N +E +   + N   L +L +  N L  +P  I    ML+ L +S N
Sbjct: 349 FQLLKIKELQLADNKLEVISHKIENFRELRILMLDKNLLKNIPEKICCCAMLECLTLSDN 408

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  I     L K   + N + ++  S+    N+   + S N I  +P ++ +C K
Sbjct: 409 KLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGVPIEIKNCQK 468

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + K+++  NK+      L A    L  L  + N ++ +P  I    +L+ L+L +N++L 
Sbjct: 469 IIKIELNYNKIMYFPLGLCA-LDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLI 527

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
                    +L    +G N +  +PA +  +  L  L L  N+ + +  E C L  L VL
Sbjct: 528 FSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVL 587

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DLS N L  +  +I  +  ++KL  + N         ++ P          +L   E   
Sbjct: 588 DLSENQLQKISSDICNLKGIQKLNFSSN-------QFIHFPIEL------CQLQSLEQLN 634

Query: 341 ASTTK-EDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            S  K   L  +   LS  +  KEL +    +  IP  I E   +  L    N I  +PP
Sbjct: 635 ISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPP 694

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            L S   LQ L LS N +   P AI  +L SL  +  D+NPL + P +
Sbjct: 695 SLLSLNDLQQLNLSGNNLTTLPSAIY-NLFSLKEINFDHNPLLRPPME 741



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 180/395 (45%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N ++ + E +    +L  L +S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 376 ELRILMLDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVK 435

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  +   + + N I   P  L     +  L
Sbjct: 436 ITDSISHLNNICSLEFSGNIIAGVPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYL 495

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 496 SVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 554

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 555 ISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSS 614

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 615 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 669

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+ +PS I+
Sbjct: 670 ----PRNIGELRNLVSLHAYNNQISYIPPSLLSLNDL-----QQLNLSGNNLTTLPSAIY 720

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 721 NLFSLKEINFDHNPL--LRPPMEICKGKQLYTIAR 753



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD+
Sbjct: 530 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDL 589

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSLP 153
           S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T LP
Sbjct: 590 SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRLP 647

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L+
Sbjct: 648 GELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLN 706

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 707 LSGNNLTTLPSAIYNLFSLKEINFDHNPLLRPPMEICKGKQLYTI 751


>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
          Length = 535

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 20/305 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L +L
Sbjct: 173 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLIML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 220 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 280 GNLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 339

Query: 194 NLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 340 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 397

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L  L L+NN L+ LP  IG +T L  L L  N
Sbjct: 398 GTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 457

Query: 309 PLRTL 313
            L  L
Sbjct: 458 LLTHL 462



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 197/448 (43%), Gaps = 62/448 (13%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ +G  +NL     S N +TSLP+ 
Sbjct: 104 LDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 163

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +  K+  LD+  NKL  + + ++     LT L    N +  + + I +L +LI L + 
Sbjct: 164 LDNLKKLRMLDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIR 222

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+           
Sbjct: 223 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNE----------- 271

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
              +LDL        P  IG + +L +L L  N L  +  SL        L    + +  
Sbjct: 272 ---LLDL--------PDTIGNLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNI-- 318

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                 ST  E L++   +L+                            L L+RN  Q  
Sbjct: 319 ------STLPESLLSSLVKLN---------------------------SLTLARNCFQLY 345

Query: 396 P-PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           P    S  +++ +L +  N+I   P  I +    LS L + +N L  +P D      M++
Sbjct: 346 PVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE 405

Query: 455 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           +   +  +  +PE+   S L  L++L L   QL   P  I  L  L  L L +N L  +P
Sbjct: 406 LNLATNQLTKIPED--VSGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLP 463

Query: 515 EGFKNLTSLTELDLSDN-NISALPPELV 541
           E    L +L EL L+DN N+ +LP EL 
Sbjct: 464 EEIGTLENLEELYLNDNPNLHSLPFELA 491



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 41/403 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 145 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 204

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L+      N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 205 TVEKDIKNLPKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 264

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+L  L RL L  NR+ +IP 
Sbjct: 265 LDLQHNELL------------------------DLPDTIGNLCSLNRLGLRYNRLSAIPR 300

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 301 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 360

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L   L  G   ++++     L  N+ ++
Sbjct: 361 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL--PLDFGTWTSMVEL---NLATNQLTK 415

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                  LI++        ++L L    L+ +P  I     +T L L  N +  LP E+ 
Sbjct: 416 IPEDVSGLISL--------EKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 467

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +  +L+ L L+ N         L   S LS + ++N PL  +P
Sbjct: 468 TLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 510



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 3/179 (1%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           S  L L   ++  +P+ I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 101 SMRLDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 160

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 478
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 161 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLI 217

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP
Sbjct: 218 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLP 276


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 190/414 (45%), Gaps = 59/414 (14%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMK-----IPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           + LP    EL +L+ L V F  + +     +P EIG  + L +       L ELP+ +G+
Sbjct: 33  AALPRDKAELLVLQKL-VLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQ 91

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL     + N + +LP  +   S + KL +  N+L +L    I     L EL    N 
Sbjct: 92  LNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVA-IGQLGNLQELDLWHNQ 150

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P TIG L  L  L+L +N++ ++P+ I    +L +  +G+N L+ LPAE+G+L  L
Sbjct: 151 LTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNL 210

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  +QL    VE  QL  L  L L  + L+ LP  IG+++ L+ + +  + L  L 
Sbjct: 211 QELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELI 270

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             + + P    LKYL  R                                   NL+ +P+
Sbjct: 271 DMVPHLPK---LKYLSLR-----------------------------------NLTTLPT 292

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           +I +   + KLDLS N I  LP  +   ++LQ L LS NK+   PD I   L +L  L L
Sbjct: 293 KIGQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVI-GQLDNLQELDL 351

Query: 435 DNNPLRQVPS--DGFKDIPMLQILD--LSYNIASLPENPPFSSLPHLQELYLRR 484
             N L  +P   D   ++ ++ + D  L YN+  LP +        +Q LY +R
Sbjct: 352 SGNKLATLPESIDQLHNLQIINLRDNMLGYNLDVLPNS--------IQRLYHKR 397



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 148/294 (50%), Gaps = 23/294 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L+L   ++ +L  ++  L  L  L+++ N+L+ LPA IG+L  L+ L +  N ++ 
Sbjct: 71  NLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVI 130

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L + D   NQL  LP+++G+  NL       N +T+LP  +     + KL
Sbjct: 131 LPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKL 190

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L ELI  ++ L  +P  IG L  L +L L  +++ ++P+S
Sbjct: 191 SLGSNRLTTLPAE-IGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNS 249

Query: 226 ISGCCSLAEF---------------------YMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           I    +L                        Y+    L+ LP ++G+LS L  LDL  NQ
Sbjct: 250 IGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQ 309

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +        QL  L  L+LS N L+ LP  IG++  L++L L+GN L TL  S+
Sbjct: 310 ITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPESI 363



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 176/378 (46%), Gaps = 44/378 (11%)

Query: 43  EAVDLQKLILAHNNIEK----LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           E + LQKL+L      K    L  ++  L  L  L +    L+ELPA IG+L+ L+ LD+
Sbjct: 41  ELLVLQKLVLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDL 100

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +P  IG  + L K     NQL  LP ++G+  NL +    +N +T LP  +  
Sbjct: 101 TGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQ 160

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L++  NKLT L    I     L +L    N L  +P  IG L  L  L L +++
Sbjct: 161 LGNLQVLNLRENKLTTLPAG-IGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQ 219

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + ++P  I    +L + Y+  + L+ALP  +G+LS L ++ + S+ L E       L +L
Sbjct: 220 LTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKL 279

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L N  L+ LP +IG+++ L+KL L+ N +                           
Sbjct: 280 KYLSLRN--LTTLPTKIGQLSNLQKLDLSDNQI--------------------------- 310

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                T   D I   + L    ++L+L G  L+A+P  I +   + +LDLS N +  LP 
Sbjct: 311 -----TALPDAIGQLSNL----QKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPE 361

Query: 398 ELSSCASLQTLILSRNKI 415
            +    +LQ + L  N +
Sbjct: 362 SIDQLHNLQIINLRDNML 379



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 170/364 (46%), Gaps = 48/364 (13%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I   + L EL+     L  +P  IG L+ L +LDL  N++ ++P++I    +L +  +G+
Sbjct: 66  IGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGD 125

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP  +G+L  L  LDL  NQL        QL  L VL+L  N L+ LP  IG++ 
Sbjct: 126 NQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLG 185

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+KL L  N L TL         PA +  L +                           
Sbjct: 186 NLQKLSLGSNRLTTL---------PAEIGQLHNL-------------------------- 210

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
            +EL L    L+ +P EI + G + KL L  + +  LP  +   ++LQ++ +  + + + 
Sbjct: 211 -QELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLEL 269

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
            D +   L  L  L L N  L  +P+     +  LQ LDLS N I +LP+      L +L
Sbjct: 270 IDMV-PHLPKLKYLSLRN--LTTLPTK-IGQLSNLQKLDLSDNQITALPD--AIGQLSNL 323

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN----NI 533
           Q+L L   +L   P  I +L  L+ LDLS N L ++PE    L +L  ++L DN    N+
Sbjct: 324 QKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPESIDQLHNLQIINLRDNMLGYNL 383

Query: 534 SALP 537
             LP
Sbjct: 384 DVLP 387



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 162/340 (47%), Gaps = 42/340 (12%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  IG LS L  L L    +  +P+ I    +L +  +  N L+ LPA +G+LS L  L
Sbjct: 62  LPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKL 121

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L  NQL    V   QL  L  LDL +N L+ LP  IG++  L+ L L  N L TL    
Sbjct: 122 SLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTL---- 177

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                PA +  L +                            ++LSL    L+ +P+EI 
Sbjct: 178 -----PAGIGQLGNL---------------------------QKLSLGSNRLTTLPAEIG 205

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   + +L L  + +  LP E+    +LQ L L  +++   P++I   LS+L  + +D++
Sbjct: 206 QLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSI-GQLSNLQSITIDSH 264

Query: 438 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
            L ++  D    +P L+ L L  N+ +LP       L +LQ+L L   Q+   P  I +L
Sbjct: 265 LLLEL-IDMVPHLPKLKYLSLR-NLTTLPTK--IGQLSNLQKLDLSDNQITALPDAIGQL 320

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L+ L+LS N L ++P+    L +L ELDLS N ++ LP
Sbjct: 321 SNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLP 360



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 26/172 (15%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
            + +P+EI +   + +L L    + ELP E+    +LQ L L+ N++   P A +  LS+
Sbjct: 59  FALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLP-ATIGQLSN 117

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L L +N L  +P                              L +LQEL L   QL 
Sbjct: 118 LQKLSLGDNQLVILPV-------------------------AIGQLGNLQELDLWHNQLT 152

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P  I +L  L++L+L +N L ++P G   L +L +L L  N ++ LP E+
Sbjct: 153 VLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEI 204


>gi|428183868|gb|EKX52725.1| hypothetical protein GUITHDRAFT_65038, partial [Guillardia theta
           CCMP2712]
          Length = 518

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 232/497 (46%), Gaps = 44/497 (8%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L   +NK+  LP ++G+L  L  L +  N +  +P+E+G   +L       NQL
Sbjct: 9   LDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLWVQDNQL 68

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG---------NKLTVLSN 177
             LP S+G+   L     + N + S P +L +C  +  +D +G          ++TVL +
Sbjct: 69  IALPKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPMEITVLRD 128

Query: 178 ---------------NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                          ++I +   L  L     L++ +P  IG LS+L  +   QNR+ S+
Sbjct: 129 LHELHLSHNPLMALSDIIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQNRLTSL 188

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  +    SL +    +N+L  LP  +GKL  L  L +  N++         L  +  + 
Sbjct: 189 PDQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSIGNLHSIEEMR 248

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS N L  +P EIG+  TL +L  + N +  L   L        L +  ++L      E 
Sbjct: 249 LSFNRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQL------ET 302

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    +T  T+L ++  +LS     +SA+    W+  E   LDLS N I ELP  + +
Sbjct: 303 LPSSMGALTAMTKLDLSKNKLS----RMSAVMGA-WQRLEF--LDLSGNMIAELPSTIGN 355

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 460
              ++ L LS  ++ ++P  I+ ++ SL+ L L +N L  +P +  + +  ++IL+L   
Sbjct: 356 MRQMK-LDLSNMELNNFPLEIV-NMESLTVLDLSDNHLESLPPE-IEQLVGVEILNLERN 412

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           N+  LP      SL  ++EL     +LR  P +  +L  ++ L+L  NSL+ +P+    L
Sbjct: 413 NLLFLPLE--LGSLYTIRELLFAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPDELSRL 470

Query: 521 TSLTELDLSDNNISALP 537
            +L +   ++N ++ LP
Sbjct: 471 VNLEQFSATNNRLTFLP 487



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 24/298 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+      L K+    N++  L E +  L  L  L+V+ NK+  +P++IG LH ++ + +
Sbjct: 190 DQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSIGNLHSIEEMRL 249

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           SFN + KIP EIG    LV+  CS N + +LP  L    NL D   ++N + +LP  +  
Sbjct: 250 SFNRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQLETLPSSMGA 309

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR---------- 208
            + M+KLD+  NKL+ +S  ++ +W  L  L  S N++  +P TIG++ +          
Sbjct: 310 LTAMTKLDLSKNKLSRMS-AVMGAWQRLEFLDLSGNMIAELPSTIGNMRQMKLDLSNMEL 368

Query: 209 ------------LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
                       L  LDL  N + S+P  I     +    +  N L  LP ELG L  + 
Sbjct: 369 NNFPLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLPLELGSLYTIR 428

Query: 257 TLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L    N+L+   VE CQL +   L+L NNSL  LP E+ ++  L +   T N L  L
Sbjct: 429 ELLFAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPDELSRLVNLEQFSATNNRLTFL 486



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 230/554 (41%), Gaps = 92/554 (16%)

Query: 39  DKWWEAVDLQKLILAHNN-IEKLKE---DLRNLPLLTVLN-------------------- 74
           DK +E +D  K + AHNN IE L     DL+NL  L +                      
Sbjct: 4   DKIFE-LDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLW 62

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ--------- 125
           V  N+L  LP ++G+L  LK L V+ N +   P E+     L   D    Q         
Sbjct: 63  VQDNQLIALPKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPME 122

Query: 126 ------LKELPSSLGRCLNLSD----------FKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L EL  S    + LSD           +  N  I  +P  +   SK+  +    
Sbjct: 123 ITVLRDLHELHLSHNPLMALSDIIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQ 182

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L + L  + T LT++    N L+ +PE IG L  L  L + +N+I  IPSSI   
Sbjct: 183 NRLTSLPDQL-CTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSIGNL 241

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-YCVEACQLRLSVLDLSNNSLS 288
            S+ E  +  N L  +P E+G+   L  L    N + +          L  L  ++N L 
Sbjct: 242 HSIEEMRLSFNRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQLE 301

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G +T + KL L+ N L   R S V G     L++L   L  N  +E  +T  ++
Sbjct: 302 TLPSSMGALTAMTKLDLSKNKLS--RMSAVMGAWQR-LEFL--DLSGNMIAELPSTIGNM 356

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
             M         +L L  M L+  P EI     +T LDLS N ++ LPPE+     ++ L
Sbjct: 357 RQM---------KLDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEIL 407

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L RN +   P   L SL ++  L    N LR  P +  + + M++ L+L  N       
Sbjct: 408 NLERNNLLFLPLE-LGSLYTIRELLFAGNELRSPPVEHCQ-LTMIKSLNLDNN------- 458

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                             L + P ++ RL  L     + N L  +P  F +L +LT  D+
Sbjct: 459 -----------------SLEQLPDELSRLVNLEQFSATNNRLTFLPLTFGHLKNLTHFDV 501

Query: 529 SDNNISALPPELVS 542
           S N +   P E+ S
Sbjct: 502 SGNEMVTPPMEVCS 515



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 212/469 (45%), Gaps = 77/469 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD+I     L      +N+++ LP+S+G   NL+  +   N +T LPE+L  C  +  L
Sbjct: 2   IPDKIFELDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTL 61

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N                 +LIA       +P+++G L++L  L + +N + S P+ 
Sbjct: 62  WVQDN-----------------QLIA-------LPKSMGKLTQLKILVVARNPLRSFPAE 97

Query: 226 ISGCCSLAEFYMG--NNALSALPAELGKLSKLGTLDLHSN---QLKEYCVEACQLRLSVL 280
           +  C +L +       + LS  P E+  L  L  L L  N    L +      QLR  VL
Sbjct: 98  LQECENLKDIDADGLQDTLSVPPMEITVLRDLHELHLSHNPLMALSDIIQTLNQLR--VL 155

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L N  +  +P  IGK++ LR +    N L +L         P  L  L S    N DS 
Sbjct: 156 RLDNTLIDEIPTFIGKLSKLRTISAVQNRLTSL---------PDQLCTLTSLTKVNFDSN 206

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +     + I     L    KELS+    +  IPS I     I ++ LS N +Q++P E+ 
Sbjct: 207 SLHVLPEAIGKLKNL----KELSVTKNKIGWIPSSIGNLHSIEEMRLSFNRLQKIPQEIG 262

Query: 401 SCASLQTLILSRN-----------------------KIKDWPDAILTSLSSLSCLKLDNN 437
            C +L  L  S N                       +++  P + + +L++++ L L  N
Sbjct: 263 RCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQLETLPSS-MGALTAMTKLDLSKN 321

Query: 438 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE--LYLRRMQLREAPTDI 494
            L ++ S        L+ LDLS N IA LP     S++ ++++  L L  M+L   P +I
Sbjct: 322 KLSRM-SAVMGAWQRLEFLDLSGNMIAELP-----STIGNMRQMKLDLSNMELNNFPLEI 375

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           + ++ L +LDLS N L+S+P   + L  +  L+L  NN+  LP EL S+
Sbjct: 376 VNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLPLELGSL 424



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+              + V ++ L L  NN+  L  +L +L  +  L
Sbjct: 384 LDLSDNHLESLPPEIE-------------QLVGVEILNLERNNLLFLPLELGSLYTIREL 430

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             + N+L   P    +L M+KSL++  NS+ ++PDE+     L +F  ++N+L  LP + 
Sbjct: 431 LFAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPDELSRLVNLEQFSATNNRLTFLPLTF 490

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCS 160
           G   NL+ F  S N + + P ++  CS
Sbjct: 491 GHLKNLTHFDVSGNEMVTPPMEV--CS 515


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G T                                   + +EL     
Sbjct: 286 NQLMYLPDS-IGGLT-----------------------------------SIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLTSIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLEILPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
            L  + L+ N  + L    + +        L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQPRTED 435



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|241779562|ref|XP_002399930.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215510641|gb|EEC20094.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 429

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 192/431 (44%), Gaps = 74/431 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ ++  L +VP+EV+ N++             L++L L  N I+ L   L +   L  L
Sbjct: 26  LDYAHCGLEEVPSEVF-NYERT-----------LEELYLNANQIKDLPRPLFHCHGLRKL 73

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N +  LP A+  L  L+ LD+S N++++IPD I     L   + S N + +LP   
Sbjct: 74  NLSDNDIQTLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGF 133

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + +N+     ++  +  LP +    SK+  L++  N L VL                  
Sbjct: 134 TQLINIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVL------------------ 175

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+++  L+ L+RLD+ QN    + + +    SL E +  NN L+ALP+ LG L 
Sbjct: 176 ------PKSMARLTELVRLDIGQNDFAELATVLESLPSLTELWCDNNRLTALPSYLGNLV 229

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  LD   N++     E   L  LS L L+ N L  +P  +G + +L  L L  N L T
Sbjct: 230 KLTYLDASRNRISYVAEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNHLAT 289

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L  S                                I    +L    +EL + G  + ++
Sbjct: 290 LPDS--------------------------------IGQLCKL----EELIINGNEIDSL 313

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           PS +     ++ L    N +++LPPE+ SC  L+ L L  N++ + PD  L  L +L  +
Sbjct: 314 PSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRVLSLRDNRLCNVPDE-LGHLGALRVV 372

Query: 433 KLDNNPLRQVP 443
            L  N LR +P
Sbjct: 373 NLSGNQLRHLP 383



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 195/465 (41%), Gaps = 86/465 (18%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLP-LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +++ L  AH  +E++  ++ N    L  L ++ N++ +LP  +   H L+ L++S N I 
Sbjct: 22  EVRVLDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQ 81

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  + S   L + D S N + E+P ++  C  LS  +AS N +  LPE       + +
Sbjct: 82  TLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLINIEQ 141

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +    L  L  N     + L  L   +N L  +P+++  L+ L+RLD+ QN    + +
Sbjct: 142 LYLNDTFLEYLPANF-GRLSKLKILELRENHLKVLPKSMARLTELVRLDIGQNDFAELAT 200

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            +    SL E +  NN L+ALP      S LG L                ++L+ LD S 
Sbjct: 201 VLESLPSLTELWCDNNRLTALP------SYLGNL----------------VKLTYLDASR 238

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N +S +  EI  +  L  L LT N L+ +         P  L  L+S      D     T
Sbjct: 239 NRISYVAEEIEHLAVLSDLTLTANKLQKV---------PETLGCLQSLTTLRLDDNHLAT 289

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             D I    +L    +EL + G  + ++PS +     ++ L    N +++LPPE+ SC  
Sbjct: 290 LPDSIGQLCKL----EELIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGK 345

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 464
           L+ L L  N++ + P                         D    +  L++++LS N   
Sbjct: 346 LRVLSLRDNRLCNVP-------------------------DELGHLGALRVVNLSGN--- 377

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
                                QLR  P  + +L  L  L LSQN 
Sbjct: 378 ---------------------QLRHLPVSLAKLGGLHALWLSQNQ 401



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L +  N+  +L   L +LP LT L   +N+L+ LP+ +G L  L  LD S N I  
Sbjct: 184 ELVRLDIGQNDFAELATVLESLPSLTELWCDNNRLTALPSYLGNLVKLTYLDASRNRISY 243

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + +EI     L     ++N+L+++P +LG   +L+  +  +N + +LP+ +    K+ +L
Sbjct: 244 VAEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNHLATLPDSIGQLCKLEEL 303

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN++  L +  +     L+ LIA  NLL  +P  IGS  +L  L L  NR+ ++P  
Sbjct: 304 IINGNEIDSLPST-VGLLRSLSILIADDNLLEDLPPEIGSCGKLRVLSLRDNRLCNVPDE 362

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           +    +L    +  N L  LP  L KL  L  L L  NQ K
Sbjct: 363 LGHLGALRVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQTK 403



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 190/453 (41%), Gaps = 88/453 (19%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++ LD +   + ++P E+      L +   ++NQ+K+LP  L  C  L     S+N I +
Sbjct: 23  VRVLDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQT 82

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP  L+                        S   L EL  SKN +  +P+ I     L  
Sbjct: 83  LPPALS------------------------SLVGLEELDISKNNVIEIPDNIKGCKCLSI 118

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           ++   N +  +P   +   ++ + Y+ +  L  LPA  G+LSKL                
Sbjct: 119 VEASVNPVGKLPEGFTQLINIEQLYLNDTFLEYLPANFGRLSKL---------------- 162

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                  +L+L  N L  LP  + ++T L                            +R 
Sbjct: 163 ------KILELRENHLKVLPKSMARLTEL----------------------------VRL 188

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            + +N+ +E +T  E L ++         EL  +   L+A+PS +    ++T LD SRN 
Sbjct: 189 DIGQNDFAELATVLESLPSLT--------ELWCDNNRLTALPSYLGNLVKLTYLDASRNR 240

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           I  +  E+   A L  L L+ NK++  P+  L  L SL+ L+LD+N L  +P D    + 
Sbjct: 241 ISYVAEEIEHLAVLSDLTLTANKLQKVPET-LGCLQSLTTLRLDDNHLATLP-DSIGQLC 298

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+ L ++ N I SLP       L  L  L      L + P +I    +LR+L L  N L
Sbjct: 299 KLEELIINGNEIDSLPST--VGLLRSLSILIADDNLLEDLPPEIGSCGKLRVLSLRDNRL 356

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            ++P+   +L +L  ++LS N +  LP  L  +
Sbjct: 357 CNVPDELGHLGALRVVNLSGNQLRHLPVSLAKL 389



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 1/174 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L  L  + N I  + E++ +L +L+ L ++ NKL ++P  +G L  L +L +  N + 
Sbjct: 229 VKLTYLDASRNRISYVAEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNHLA 288

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD IG    L +   + N++  LPS++G   +LS   A +N +  LP ++  C K+  
Sbjct: 289 TLPDSIGQLCKLEELIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRV 348

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           L +  N+L  + + L      L  +  S N L  +P ++  L  L  L L QN+
Sbjct: 349 LSLRDNRLCNVPDEL-GHLGALRVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQ 401


>gi|440293932|gb|ELP86979.1| podocan precursor, putative, partial [Entamoeba invadens IP1]
          Length = 571

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 254/550 (46%), Gaps = 64/550 (11%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           N  N+SL+ +P + + N            A  L  + L++N I  + +++     LT   
Sbjct: 9   NKKNQSLKSIPKDCFSN------------ASALLSVDLSNNEITSIPKEISAFKSLTHFR 56

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V  N+L+ LP  I  L  L+ LD++ N     P +I + T L +     NQL E+P  +G
Sbjct: 57  VMANRLTCLPNNIVTLTCLRHLDLNANQFTSFPVQISNLTTLEELQMIQNQLTEIPDCIG 116

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
              NL     + N + +LP+ L+ C+ ++ +++  N+  V   ++I   T +T L+  +N
Sbjct: 117 NLTNLQRISFTANNLKALPKSLSKCTNINFVELTSNEFDVFP-DVICDLTKVTILMMQQN 175

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P +I  L +L  L L  N+  + P S+    SL +  + NN    +P  L KL K
Sbjct: 176 NLKEIPMSIKRLEKLSGLLLSSNQFSTFPESVCEVTSLTQIELDNNNFVEIPNSLSKLVK 235

Query: 255 LGTLDLHSNQLKEYCVEA-------CQLRLS------VLDLSNNS-LSGLPPEIGKMTTL 300
           L  L L+ + +   C+ +       CQ+ LS      + DLS N+ L+ L    G ++ L
Sbjct: 236 LKALVLNKSFIS--CLNSVDMMSNLCQVVLSDTKCMFLPDLSTNAKLTSLNVIHGCLSEL 293

Query: 301 RKL------LLTGNPLRTLRSSLVNGPTPALLKYL---RSRLPENEDSEASTTKEDLITM 351
           + L        TGN +       V  P    L+Y+    ++L  + D         +++ 
Sbjct: 294 KSLPPSCSCRFTGNVIED-----VEFPDNGTLQYMILANNKLKTSPDLS-------MLSK 341

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            +RL ++         N      E      + +LD+S N + E P  LS C SL++L +S
Sbjct: 342 ISRLDISQ--------NCITWFDEKTCHPTLQQLDVSCNPLVEFPVCLSKCVSLKSLNVS 393

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPP 470
              + D P A L++L++L  L L  N L  +  +    +  L+ L L S N+   P +  
Sbjct: 394 DCHLFDVPAAALSTLTNLETLFLACNHLSSL--ESLSVMTKLKALYLQSNNLLHFPRS-- 449

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
             +L  L+ L++   Q+   P  I +L  L  +DL  N++QS  +    + SL E+D+S 
Sbjct: 450 VFALASLKTLFMSNNQITVIPDQITQLTNLEQIDLCCNAIQSF-DSLTKVPSLKEIDVSF 508

Query: 531 NNISALPPEL 540
           N I ALP ++
Sbjct: 509 NFIKALPVDI 518



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLN+S+  L DVP                    +L+ L LA N++  L E L  +  L  
Sbjct: 389 SLNVSDCHLFDVP------------AAALSTLTNLETLFLACNHLSSL-ESLSVMTKLKA 435

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N L   P ++  L  LK+L +S N I  IPD+I   T L + D   N ++    S
Sbjct: 436 LYLQSNNLLHFPRSVFALASLKTLFMSNNQITVIPDQITQLTNLEQIDLCCNAIQSF-DS 494

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           L +  +L +   S N I +LP D+ +   +  L+V GN+L+
Sbjct: 495 LTKVPSLKEIDVSFNFIKALPVDIENLKNLCALNVFGNELS 535



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 5/176 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           +++IP EI     +T   +  N +  LP  + +   L+ L L+ N+   +P  I ++L++
Sbjct: 39  ITSIPKEISAFKSLTHFRVMANRLTCLPNNIVTLTCLRHLDLNANQFTSFPVQI-SNLTT 97

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L++  N L ++P D   ++  LQ +  + N + +LP++   S   ++  + L   + 
Sbjct: 98  LEELQMIQNQLTEIP-DCIGNLTNLQRISFTANNLKALPKS--LSKCTNINFVELTSNEF 154

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              P  I  L ++ IL + QN+L+ IP   K L  L+ L LS N  S  P  +  V
Sbjct: 155 DVFPDVICDLTKVTILMMQQNNLKEIPMSIKRLEKLSGLLLSSNQFSTFPESVCEV 210


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 98  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      NN +T+LP+++     +  L +  N+LT+L                 
Sbjct: 205 IGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTIL----------------- 247

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+ +L
Sbjct: 248 -------PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQL 300

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 160/345 (46%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L      NN +T+LP+++    K+  L +  N+LT L    I     L  L  
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N +  +P+ I  L +L  L L  N++ ++P  I    +L   Y+ NN L+ LP E+G 
Sbjct: 171 SYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGH 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L SNQL     E  QL+ L  L+L NN L+ L  EI ++  L+ L L  N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T          P  ++ L++                       L V    L L    L+
Sbjct: 291 TTF---------PKEIEQLKN-----------------------LQV----LDLGSNQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P  I +   +  LDL  N +  LP E+    +LQ L L+ N++
Sbjct: 315 TLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 149/302 (49%), Gaps = 15/302 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS    + +P E+ K               +LQ+L L  N +  L +++  L  L  
Sbjct: 52  TLDLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRK 98

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N++  +P  I +L  L+SL +  N +  +P EIG    L       NQL  LP  
Sbjct: 99  LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 158

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N I ++P+++    K+  L ++ N+LT L    I     L  L   
Sbjct: 159 IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE-IGQLQNLQSLYLP 217

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++  +P+ I    +L    + NN L+ L  E+ +L
Sbjct: 218 NNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 277

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L +LDL SNQL  +  E  QL+ L VLDL +N L+ LP  IG++  L+ L L  N L 
Sbjct: 278 QNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLT 337

Query: 312 TL 313
           TL
Sbjct: 338 TL 339



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 161/360 (44%), Gaps = 39/360 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +L L
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +NQL     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 217 PNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI-- 274

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P EI + 
Sbjct: 275 --------------------------EQLQNL--------KSLDLRSNQLTTFPKEIEQL 300

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  LDL  N +  LP  +    +LQTL L  N++   P  I   L +L  L L+NN L
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI-GQLQNLQELFLNNNQL 359



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 158/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                              L+L    +  IP EI +  ++  L L  N
Sbjct: 167 S------------------------------LNLSYNQIKTIPKEIEKLQKLQSLGLDNN 196

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +LQ+L L  N++   P  I   L +L  L L +N L  +P++    +
Sbjct: 197 QLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEI-GHLQNLQDLYLVSNQLTILPNE-IGQL 254

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ L+L  N + +L +      L +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 255 KNLQTLNLRNNRLTTLSKE--IEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 343



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 43/362 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    I     L 
Sbjct: 39  DLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IGQLKNLR 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  N L+ LP 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++  L+ L L 
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLP 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  + +L++              +DL  ++ +L++         
Sbjct: 218 NNQLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI--------- 246

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
                +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +P  I   L
Sbjct: 247 -----LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI-EQL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +LQEL+L   
Sbjct: 301 KNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQE--IGQLQNLQELFLNNN 357

Query: 486 QL 487
           QL
Sbjct: 358 QL 359



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SL +  N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTTFPKE-IEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQE--IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  L L +N ++ LP E+
Sbjct: 204 EIGQLQNLQSLYLPNNQLTTLPQEI 228


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 23/266 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+ +N+ + LP  IG+L  L+ L +  N + 
Sbjct: 44  LDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLT 103

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G    L  F+ ++NQL  LP+ +G+  NL      NN +T+LP+++     +  
Sbjct: 104 TLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYD 163

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKLT L          L  L  SKNLL  +P  IG L +L+ L+L  N++ ++P 
Sbjct: 164 LSLHDNKLTTLPKE-TGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPK 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I    SL E Y+G+N L  LP E+G+L  L  L L   Q                    
Sbjct: 223 EIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQ-------------------- 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L+ +P EIG++  LR LLL  NP+
Sbjct: 263 --LTTVPKEIGQLKKLRWLLLDANPI 286



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 129/290 (44%), Gaps = 38/290 (13%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           K+L  +L   L++     S   +T LP+++     +  L++  N+ T L N  I     L
Sbjct: 34  KDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNE-IGQLQSL 92

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL    N L  +P+ +G L  L   +L+ N++ ++P+ I    +L    + NN L+ LP
Sbjct: 93  RELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLP 152

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L LH N+L     E  QL+ L +L+LS N L+ LP EIG++  L  L L
Sbjct: 153 KEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNL 212

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           T N L TL         P  +  L+S                            +EL L 
Sbjct: 213 TYNQLTTL---------PKEIGQLQS---------------------------LRELYLG 236

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
              L  +P EI +   + +L L    +  +P E+     L+ L+L  N I
Sbjct: 237 DNQLKTLPKEIGQLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDANPI 286



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 137/332 (41%), Gaps = 86/332 (25%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK  L  +P+ IG L  L  L+L  N+  ++P+ I    SL E Y+G+N L+ LP E+G+
Sbjct: 52  SKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQ 111

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L                        L V +L+NN L+ LP EIGK+  L+ L L  N L 
Sbjct: 112 LK----------------------NLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLT 149

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +        LK L                               +LSL    L+ 
Sbjct: 150 TLPKEV------GQLKNLY------------------------------DLSLHDNKLTT 173

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P E  +   +  L+LS+N +  LP E+     L +L L+ N++   P  I   L SL  
Sbjct: 174 LPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEI-GQLQSLRE 232

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           L L +N L+ +P +                            L +L+EL LR  QL   P
Sbjct: 233 LYLGDNQLKTLPKE-------------------------IGQLKNLRELLLRHKQLTTVP 267

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +I +L++LR L L  N +  +P+  K +   
Sbjct: 268 KEIGQLKKLRWLLLDANPI--LPKELKRIQKF 297



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 125/289 (43%), Gaps = 44/289 (15%)

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L+L   +L     E  QL+ L  L+L NN  + LP EIG++ +LR+L L  N L TL  
Sbjct: 48  VLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPK 107

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +        LK L+                                 L    L+ +P+E
Sbjct: 108 EV------GQLKNLQV------------------------------FELNNNQLTTLPAE 131

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
           I +   +  LDL  N +  LP E+    +L  L L  NK+   P      L +L  L L 
Sbjct: 132 IGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKET-GQLKNLRMLNLS 190

Query: 436 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            N L  +P++    +  L  L+L+YN + +LP+      L  L+ELYL   QL+  P +I
Sbjct: 191 KNLLTILPNE-IGQLKKLLSLNLTYNQLTTLPKE--IGQLQSLRELYLGDNQLKTLPKEI 247

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +L+ LR L L    L ++P+    L  L  L L  N I  LP EL  +
Sbjct: 248 GQLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDANPI--LPKELKRI 294



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 29/227 (12%)

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +E   T +DL T A +  +  + L+L    L+ +P EI +   +  L+L  N    LP 
Sbjct: 26  QAEEPGTYKDL-TKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPN 84

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    SL+ L L  N++   P  +   L +L   +L+NN L  +P++  K +  LQ LD
Sbjct: 85  EIGQLQSLRELYLGDNQLTTLPKEV-GQLKNLQVFELNNNQLTTLPAEIGK-LKNLQHLD 142

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-------- 508
           L  N + +LP+      L +L +L L   +L   P +  +L+ LR+L+LS+N        
Sbjct: 143 LWNNQLTTLPKE--VGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNE 200

Query: 509 ---------------SLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                           L ++P+    L SL EL L DN +  LP E+
Sbjct: 201 IGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEI 247


>gi|260819403|ref|XP_002605026.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
 gi|229290356|gb|EEN61036.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
          Length = 667

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 211/501 (42%), Gaps = 90/501 (17%)

Query: 47  LQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++KLIL HN++  L  +L   L  L VL+V  N L  LP   G L +L+ L    N + +
Sbjct: 65  VEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPTLFGNLTLLRELHAGENCLQE 124

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD       L     + N+L+ LPS  G   +L       N +  LP+      ++ + 
Sbjct: 125 LPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLKKLPKTFGSLRRLERF 184

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D   NKL  L  +     + L  L  S N L+ +PE+ G L +L  ++L  N +  +   
Sbjct: 185 DASNNKLETLPES-FGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVELSGNSLSFLTKD 243

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLR----LSVL 280
           +     L + Y+ NN L  LP  +G LS +  + L  N+L  +   E+   R    L +L
Sbjct: 244 LKSSHCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNKLMNQPLPESFPARSGRTLRLL 303

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DLS N ++ LP  +G++ +L  L L        R    NG       +L + LPEN    
Sbjct: 304 DLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNG------NWLCA-LPEN---- 352

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                        RL    K L L+   L+ +P      G +  LD+ +N ++ELP    
Sbjct: 353 -----------FGRLRHL-KTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFC 400

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
             ++LQ L            +    LSSL  L+LDNN L ++P + F ++  L+ LDL  
Sbjct: 401 ELSNLQLL-----------PSNFGRLSSLVDLRLDNNMLGELP-ESFAELRQLRTLDLFC 448

Query: 461 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
           N                        +LRE                       +P   K+L
Sbjct: 449 N------------------------ELRE-----------------------VPGALKHL 461

Query: 521 TSLTELDLSDNNISALPPELV 541
           TS+T LD+  N  S LPPELV
Sbjct: 462 TSITRLDMDKNKFS-LPPELV 481



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 178/418 (42%), Gaps = 65/418 (15%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +  DL+ L L  N +  L  D  +L  L  L +  N L +LP   G L  L+  D 
Sbjct: 127 DSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLKKLPKTFGSLRRLERFDA 186

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P+  G  + L   + S+N+L  LP S G                       D
Sbjct: 187 SNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFG-----------------------D 223

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++ ++++ GN L+ L+ +L +S   L +L    N+L  +P  +G LS +  + L  N+
Sbjct: 224 LPQLQEVELSGNSLSFLTKDLKSS-HCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNK 282

Query: 219 ILS--IPSSISGCC--SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           +++  +P S       +L    +  N ++ALPA LG+L  L +L L S  + E      Q
Sbjct: 283 LMNQPLPESFPARSGRTLRLLDLSGNFITALPASLGQLGSLESLHLGS-AIGELERRHFQ 341

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
                   + N L  LP   G++  L+ L L  N L  L  S  +  +   L   ++ L 
Sbjct: 342 --------NGNWLCALPENFGRLRHLKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLK 393

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           E  DS                     ELS    NL  +PS       +  L L  N + E
Sbjct: 394 ELPDSFC-------------------ELS----NLQLLPSNFGRLSSLVDLRLDNNMLGE 430

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN----PLRQVPSDGFK 448
           LP   +    L+TL L  N++++ P A L  L+S++ L +D N    P   VP+  FK
Sbjct: 431 LPESFAELRQLRTLDLFCNELREVPGA-LKHLTSITRLDMDKNKFSLPPELVPNIIFK 487



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 175/426 (41%), Gaps = 68/426 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++   ++N +E L E    L  L +LN+S NKLS LP + G+L  L+ +++S NS+  +
Sbjct: 181 LERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVELSGNSLSFL 240

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS--LPEDLADCS--KM 162
             ++ S+  L K    +N LKELP  +G   ++ +    +N + +  LPE     S   +
Sbjct: 241 TKDLKSSHCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNKLMNQPLPESFPARSGRTL 300

Query: 163 SKLDVEGNKLTVLSNNL--------IASWTMLTEL----IASKNLLNGMPETIGSLSRLI 210
             LD+ GN +T L  +L        +   + + EL      + N L  +PE  G L  L 
Sbjct: 301 RLLDLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLK 360

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-------------AELGKLSKLGT 257
            L L +N++  +P S     SL    +G N L  LP             +  G+LS L  
Sbjct: 361 TLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQLLPSNFGRLSSLVD 420

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---TL 313
           L L +N L E      +LR L  LDL  N L  +P  +  +T++ +L +  N       L
Sbjct: 421 LRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTSITRLDMDKNKFSLPPEL 480

Query: 314 RSSLVNGPT-----PALLKYLRSR------------------------------LPENED 338
             +++  PT     P L    R R                              +P N+ 
Sbjct: 481 VPNIIFKPTYAARDPRLKDTWRGRNRADRNKVEVVKLEPLPDEEEEVEDEKDGPIPWNDS 540

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                  + +    +  S       +EG +     S   E G  T++D S  S+ E PP 
Sbjct: 541 ILRQAMAKSMSLWRSHTSEEGSHTRVEGSHTKVEGSYTTEEGSHTRVDGSHTSVDEGPPA 600

Query: 399 LSSCAS 404
            +S  S
Sbjct: 601 FNSQFS 606



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%)

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +   P  + +   ++ LIL  N +   P  +  +L+ L  L +  N L  +P+  F ++ 
Sbjct: 52  LSSFPESVLNLTHVEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPT-LFGNLT 110

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
           +L+ L    N +  LP++  FS L  L+ LYL   +LR  P+D   L+ L  L + +N L
Sbjct: 111 LLRELHAGENCLQELPDS--FSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHL 168

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALP 537
           + +P+ F +L  L   D S+N +  LP
Sbjct: 169 KKLPKTFGSLRRLERFDASNNKLETLP 195


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G T                                   + +EL     
Sbjct: 286 NQLMYLPDS-IGGLT-----------------------------------SIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLTSIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLEILPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
            L  + L+ N  + L    + +        L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQPRTED 435



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ I EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269


>gi|124005686|ref|ZP_01690525.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988754|gb|EAY28360.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 439

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 192/463 (41%), Gaps = 96/463 (20%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           + VLN  H         I EL+   +L +S   +  +P E+G    +       N L  L
Sbjct: 54  INVLNSQH---------IKELYTTDTLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTL 104

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+      N+ +    +N  ++ P++                        I S   L +L
Sbjct: 105 PTEFKLLQNVINLHLDHNPFSTFPDE------------------------IFSLASLQDL 140

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                 L+ +P  IG L RL +LDL  N++  +P+ I+   +L    +  N  + LP E+
Sbjct: 141 ALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTKITHLKNLRHLNLSGNQFTTLPKEV 200

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L +L  L++  N +    +    L+ L  L L NN+L+ LPPEI ++  L  L L+ N
Sbjct: 201 NSLKELVYLNISDNPITTLSLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLSKN 260

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            ++ L       P    LK+L                              +EL L    
Sbjct: 261 QIKNL------PPEIKKLKHL------------------------------EELYLYSNQ 284

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           LSA+P EI E  E+  L L +N + +LPPE+    +LQ L + +NK+   P+ I+ +L  
Sbjct: 285 LSALPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEIV-NLKD 343

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L+L +N L  +P + +K                           HL+ LYL   QL+
Sbjct: 344 LRELRLSDNQLTYLPEEKWKT-------------------------KHLKVLYLDSNQLK 378

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             P  I  L+ L  L+LS N L+ +P    NL SL  LDL  N
Sbjct: 379 TLPIGICSLKNLETLNLSFNELEELPSEVSNLKSLRWLDLEGN 421



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 190/433 (43%), Gaps = 73/433 (16%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K   T+ +L LS++ +  +P EV              +   ++ + L  NN+  L  + 
Sbjct: 62  IKELYTTDTLGLSSKGVEYLPPEV-------------GQLQQMKYIGLDGNNLTTLPTEF 108

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           + L  +  L++ HN  S  P  I  L  L+ L +    +  +P  IG    L K D  +N
Sbjct: 109 KLLQNVINLHLDHNPFSTFPDEIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNN 168

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP+ +    NL     S N  T+LP+++    ++  L++  N +T LS N  +S  
Sbjct: 169 QLAYLPTKITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLN-PSSLQ 227

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N L  +P  I  L  L  L L +N+I ++P  I     L E Y+ +N LSA
Sbjct: 228 NLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSA 287

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP E+G+L +L  L L  NQ                      LS LPPEIG++  L+ L 
Sbjct: 288 LPPEIGELKELFMLGLDKNQ----------------------LSDLPPEIGQLKNLQGLY 325

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           +  N L  L + +VN      LK LR                              EL L
Sbjct: 326 VPKNKLALLPNEIVN------LKDLR------------------------------ELRL 349

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L+ +P E W+   +  L L  N ++ LP  + S  +L+TL LS N++++ P  + +
Sbjct: 350 SDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLPIGICSLKNLETLNLSFNELEELPSEV-S 408

Query: 425 SLSSLSCLKLDNN 437
           +L SL  L L+ N
Sbjct: 409 NLKSLRWLDLEGN 421



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 161/394 (40%), Gaps = 87/394 (22%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S+  +  LP ++    +M  + ++GN LT L                        P    
Sbjct: 74  SSKGVEYLPPEVGQLQQMKYIGLDGNNLTTL------------------------PTEFK 109

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  +I L L  N   + P  I    SL +  +G+  LS+LP+ +G+L +L  LDL +NQ
Sbjct: 110 LLQNVINLHLDHNPFSTFPDEIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQ 169

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L     +   L+ L  L+LS N  + LP E+  +  L  L ++ NP+ TL  +      P
Sbjct: 170 LAYLPTKITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLN------P 223

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           + L+ LRS                              LSL   NL+ +P EI+E   + 
Sbjct: 224 SSLQNLRS------------------------------LSLGNNNLTELPPEIFELKNLE 253

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L LS+N I+ LPPE+     L+ L L  N++   P  I   L  L  L LD N L  +P
Sbjct: 254 VLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSALPPEI-GELKELFMLGLDKNQLSDLP 312

Query: 444 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
                                    P    L +LQ LY+ + +L   P +I+ L+ LR L
Sbjct: 313 -------------------------PEIGQLKNLQGLYVPKNKLALLPNEIVNLKDLREL 347

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            LS N L  +PE       L  L L  N +  LP
Sbjct: 348 RLSDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLP 381



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 138/288 (47%), Gaps = 39/288 (13%)

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L LS+  +  LPPE+G++  ++ + L GN L TL         P   K L++ +  + D
Sbjct: 70  TLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTL---------PTEFKLLQNVINLHLD 120

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
               +T  D I     L    ++L+L    LS++PS I     + KLDL  N +  LP +
Sbjct: 121 HNPFSTFPDEIFSLASL----QDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTK 176

Query: 399 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 436
           ++   +L+ L LS N+    P  +                       +SL +L  L L N
Sbjct: 177 ITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLNPSSLQNLRSLSLGN 236

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N L ++P + F ++  L++L LS N I +LP  P    L HL+ELYL   QL   P +I 
Sbjct: 237 NNLTELPPEIF-ELKNLEVLWLSKNQIKNLP--PEIKKLKHLEELYLYSNQLSALPPEIG 293

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            L++L +L L +N L  +P     L +L  L +  N ++ LP E+V++
Sbjct: 294 ELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEIVNL 341



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 6/211 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +NN+ +L  ++  L  L VL +S N++  LP  I +L  L+ L +  N +  
Sbjct: 228 NLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSA 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL +LP  +G+  NL       N +  LP ++ +   + +L
Sbjct: 288 LPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEIVNLKDLREL 347

Query: 166 DVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            +  N+LT L       W    L  L    N L  +P  I SL  L  L+L  N +  +P
Sbjct: 348 RLSDNQLTYLPE---EKWKTKHLKVLYLDSNQLKTLPIGICSLKNLETLNLSFNELEELP 404

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           S +S   SL    +  N LS    ++G LS+
Sbjct: 405 SEVSNLKSLRWLDLEGN-LSIAEKKIGGLSR 434


>gi|260815367|ref|XP_002602445.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
 gi|229287754|gb|EEN58457.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
          Length = 1065

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N+L +LP  +G L  LK L +  N I ++P EIG    L   D S N+L+ L
Sbjct: 129 LEQLDLGANELEDLPETLGALPNLKELWLDGNEIKELPPEIGHLKKLSCLDVSENKLEFL 188

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G  ++L+D   S NC+ +LP+ +    +++ L V+ N++ VL+ + I S   + EL
Sbjct: 189 PDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQLAMLKVDQNRILVLTPD-IGSCERIREL 247

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           I ++NLL  +P TIG+L  +I  ++ +NR+L++P  I GC  L    + +N L+ LP EL
Sbjct: 248 ILTENLLQEIPPTIGNLKEMINFNVDRNRLLNVPDEIGGCVKLGVLSLRDNRLTRLPNEL 307

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           G L +L  +D+  N+L+        L L  + LS N
Sbjct: 308 GNLKELHVMDVAGNRLENLPFSITALNLKAVWLSEN 343



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 27/296 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L  + N++  + E+++    L+V++ S N +++LP    +L  L+ + ++  S+ K+
Sbjct: 37  LMELDCSRNDLPDIPENIKFCKSLSVVDFSGNPIAKLPDGFTQLRGLRYVALNDISLHKL 96

Query: 107 PDEIGSATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDFK 143
           P +IGS + L+                       + D  +N+L++LP +LG   NL +  
Sbjct: 97  PGDIGSLSNLITLELRENLLKVLPTSLSFLVKLEQLDLGANELEDLPETLGALPNLKELW 156

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N I  LP ++    K+S LDV  NKL  L +  I     LT+L  S+N L  +P+TI
Sbjct: 157 LDGNEIKELPPEIGHLKKLSCLDVSENKLEFLPDE-IGGLVSLTDLHLSQNCLEALPDTI 215

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNRIL +   I  C  + E  +  N L  +P  +G L ++   ++  N
Sbjct: 216 GKLKQLAMLKVDQNRILVLTPDIGSCERIRELILTENLLQEIPPTIGNLKEMINFNVDRN 275

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +L     E   C ++L VL L +N L+ LP E+G +  L  + + GN L  L  S+
Sbjct: 276 RLLNVPDEIGGC-VKLGVLSLRDNRLTRLPNELGNLKELHVMDVAGNRLENLPFSI 330



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 165/365 (45%), Gaps = 47/365 (12%)

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P     L  L+ L +S N ++++P EI +  +L++ DCS N L ++P ++  C +LS   
Sbjct: 5   PQPFFRLMNLRKLSISDNELLRLPGEISNFMSLMELDCSRNDLPDIPENIKFCKSLSVVD 64

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S N I  LP+       +                    +  L ++      L+ +P  I
Sbjct: 65  FSGNPIAKLPDGFTQLRGL-------------------RYVALNDIS-----LHKLPGDI 100

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           GSLS LI L+L +N +  +P+S+S    L +  +G N L  LP  LG L  L  L L  N
Sbjct: 101 GSLSNLITLELRENLLKVLPTSLSFLVKLEQLDLGANELEDLPETLGALPNLKELWLDGN 160

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           ++KE   E   L +LS LD+S N L  LP EIG + +L  L L+ N L  L  ++     
Sbjct: 161 EIKELPPEIGHLKKLSCLDVSENKLEFLPDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQ 220

Query: 323 PALLKYLRSRL----PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
            A+LK  ++R+    P+             I    R+    +EL L    L  IP  I  
Sbjct: 221 LAMLKVDQNRILVLTPD-------------IGSCERI----RELILTENLLQEIPPTIGN 263

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             E+   ++ RN +  +P E+  C  L  L L  N++   P+  L +L  L  + +  N 
Sbjct: 264 LKEMINFNVDRNRLLNVPDEIGGCVKLGVLSLRDNRLTRLPNE-LGNLKELHVMDVAGNR 322

Query: 439 LRQVP 443
           L  +P
Sbjct: 323 LENLP 327



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+    L  L +L +  N +L +P  IS   SL E     N L  +P  +     L  +D
Sbjct: 5   PQPFFRLMNLRKLSISDNELLRLPGEISNFMSLMELDCSRNDLPDIPENIKFCKSLSVVD 64

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
              N + +      QLR L  + L++ SL  LP +IG ++ L  L L  N L+ L +SL 
Sbjct: 65  FSGNPIAKLPDGFTQLRGLRYVALNDISLHKLPGDIGSLSNLITLELRENLLKVLPTSL- 123

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 L+K  +  L  NE  +   T   L  +        KEL L+G  +  +P EI  
Sbjct: 124 ----SFLVKLEQLDLGANELEDLPETLGALPNL--------KELWLDGNEIKELPPEIGH 171

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
             +++ LD+S N ++ LP E+    SL  L LS+N ++  PD I   L  L+ LK+D N 
Sbjct: 172 LKKLSCLDVSENKLEFLPDEIGGLVSLTDLHLSQNCLEALPDTI-GKLKQLAMLKVDQN- 229

Query: 439 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
                          +IL L+         P   S   ++EL L    L+E P  I  L+
Sbjct: 230 ---------------RILVLT---------PDIGSCERIRELILTENLLQEIPPTIGNLK 265

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           ++   ++ +N L ++P+       L  L L DN ++ LP EL
Sbjct: 266 EMINFNVDRNRLLNVPDEIGGCVKLGVLSLRDNRLTRLPNEL 307


>gi|428173635|gb|EKX42536.1| hypothetical protein GUITHDRAFT_88072 [Guillardia theta CCMP2712]
          Length = 552

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 45/506 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLK--SLDVS 99
           WE   L+ L L HN ++ +  ++  L  LT L V  N L  LP  +G+   LK  SL + 
Sbjct: 23  WELNVLKTLQLDHNQLDDIPPEIEQLSSLTKLRVDCNNLEALPETLGQRTTLKYLSLRLE 82

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPS-SLGRCLNLSDFKASNN--CITSLPEDL 156
            N +  +P E+   T+L   D S+N ++EL   SLGR  NL+     NN    + +PE++
Sbjct: 83  GNRLTCLPPEVHFLTSLTYLDLSNNAIEELDGESLGRLTNLTHLSLRNNPKSFSFIPEEI 142

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
              + ++ L+++   L  L    +     L +LI + N L  +P+ IGS + L  L LH+
Sbjct: 143 GRLTSLTFLNLQHCSLVELPAG-VGLLLNLKQLILNNNRLLLLPQEIGSCTSLTHLRLHE 201

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           N +  +P +I     + +  + NN +  LP ELG +  L +  + SNQL    +    L 
Sbjct: 202 NLLEEVPKAIGRLTLMQDLRLFNNNILQLPVELGFMKYLPSFRISSNQLASLPIGIGGLE 261

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ L LS+N L  LPP+IG +T++ +L  + N L+ L + L N  +   L    ++L +
Sbjct: 262 SLTDLLLSDNFLEFLPPQIGLLTSITRLRASSNRLQELPAELGNLSSMTELGVSNNQLTQ 321

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                  T    L+  A    +TS   SL  ++L              KL L+ N ++ L
Sbjct: 322 LPPIGHLTALRTLLLDARYNMLTSFPPSLAHLSL-------------LKLFLNSNELRSL 368

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P  +SS  SL     + N I+D   +    L+ L  L L  N LR++P D F D+  L++
Sbjct: 369 PACISSLHSLLLFSAANNTIRDIAGSAFRGLTRLEELYLQQNDLRELP-DMFHDLVALRV 427

Query: 456 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
           LD+S+N              HL  L          P  I +  +L  L L+ N L++   
Sbjct: 428 LDVSFN--------------HLFSL----------PASIAKASRLSYLSLAYNDLETSSL 463

Query: 516 GFKNLTSLTELDLSDNNISALPPELV 541
            F  L  L  ++L+ N +  +P   V
Sbjct: 464 VFDVLDKLEHVNLTSNRLLGIPHTFV 489



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 197/444 (44%), Gaps = 49/444 (11%)

Query: 13  SLNLSNRSLRDVPNEVY-----------KNFDEAGEGDKWWEAVDLQKLILAHN--NIEK 59
           SL L    L  +P EV+            N  E  +G+      +L  L L +N  +   
Sbjct: 78  SLRLEGNRLTCLPPEVHFLTSLTYLDLSNNAIEELDGESLGRLTNLTHLSLRNNPKSFSF 137

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           + E++  L  LT LN+ H  L ELPA +G L  LK L ++ N ++ +P EIGS T+L   
Sbjct: 138 IPEEIGRLTSLTFLNLQHCSLVELPAGVGLLLNLKQLILNNNRLLLLPQEIGSCTSLTHL 197

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               N L+E+P ++GR   + D +  NN I  LP +L     +    +  N+L  L    
Sbjct: 198 RLHENLLEEVPKAIGRLTLMQDLRLFNNNILQLPVELGFMKYLPSFRISSNQLASLPIG- 256

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     LT+L+ S N L  +P  IG L+ + RL    NR+  +P+ +    S+ E  + N
Sbjct: 257 IGGLESLTDLLLSDNFLEFLPPQIGLLTSITRLRASSNRLQELPAELGNLSSMTELGVSN 316

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N L+ LP  +G L+ L TL                    +LD   N L+  PP +  ++ 
Sbjct: 317 NQLTQLPP-IGHLTALRTL--------------------LLDARYNMLTSFPPSLAHLSL 355

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L KL L  N LR+L         PA +  L S       S A+ T  D+   A R     
Sbjct: 356 L-KLFLNSNELRSL---------PACISSLHS---LLLFSAANNTIRDIAGSAFRGLTRL 402

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL L+  +L  +P    +   +  LD+S N +  LP  ++  + L  L L+ N ++   
Sbjct: 403 EELYLQQNDLRELPDMFHDLVALRVLDVSFNHLFSLPASIAKASRLSYLSLAYNDLET-S 461

Query: 420 DAILTSLSSLSCLKLDNNPLRQVP 443
             +   L  L  + L +N L  +P
Sbjct: 462 SLVFDVLDKLEHVNLTSNRLLGIP 485



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 223/500 (44%), Gaps = 96/500 (19%)

Query: 70  LTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L++S N++ S +P ++ EL++LK+L +  N +  IP EI   ++L K     N L+ 
Sbjct: 4   LKSLSLSSNRIESPIPVSLWELNVLKTLQLDHNQLDDIPPEIEQLSSLTKLRVDCNNLEA 63

Query: 129 LPSSLGR--CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           LP +LG+   L     +   N +T LP ++   + ++ LD+  N +  L    +   T L
Sbjct: 64  LPETLGQRTTLKYLSLRLEGNRLTCLPPEVHFLTSLTYLDLSNNAIEELDGESLGRLTNL 123

Query: 187 TELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           T L    N    + +PE IG L+ L  L+L    ++ +P+ +    +L +  + NN L  
Sbjct: 124 THLSLRNNPKSFSFIPEEIGRLTSLTFLNLQHCSLVELPAGVGLLLNLKQLILNNNRLLL 183

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP E+G  + L  L LH N L+E                      +P  IG++T ++ L 
Sbjct: 184 LPQEIGSCTSLTHLRLHENLLEE----------------------VPKAIGRLTLMQDLR 221

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           L  N +  L   L        +KYL S R+  N+                          
Sbjct: 222 LFNNNILQLPVEL------GFMKYLPSFRISSNQ-------------------------- 249

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
                L+++P  I     +T L LS N ++ LPP++    S+  L  S N++++ P A L
Sbjct: 250 -----LASLPIGIGGLESLTDLLLSDNFLEFLPPQIGLLTSITRLRASSNRLQELP-AEL 303

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ--ELY 481
            +LSS++ L + NN L Q+P  G        +LD  YN+  L   PP  SL HL   +L+
Sbjct: 304 GNLSSMTELGVSNNQLTQLPPIGHLTALRTLLLDARYNM--LTSFPP--SLAHLSLLKLF 359

Query: 482 LRRMQLREAPTDILR------------------------LQQLRILDLSQNSLQSIPEGF 517
           L   +LR  P  I                          L +L  L L QN L+ +P+ F
Sbjct: 360 LNSNELRSLPACISSLHSLLLFSAANNTIRDIAGSAFRGLTRLEELYLQQNDLRELPDMF 419

Query: 518 KNLTSLTELDLSDNNISALP 537
            +L +L  LD+S N++ +LP
Sbjct: 420 HDLVALRVLDVSFNHLFSLP 439



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 162/339 (47%), Gaps = 21/339 (6%)

Query: 206 LSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           + RL  L L  NRI S IP S+     L    + +N L  +P E+ +LS L  L +  N 
Sbjct: 1   MQRLKSLSLSSNRIESPIPVSLWELNVLKTLQLDHNQLDDIPPEIEQLSSLTKLRVDCNN 60

Query: 265 LK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           L+   E   +   L+   L L  N L+ LPPE+  +T+L  L L+ N +  L     +G 
Sbjct: 61  LEALPETLGQRTTLKYLSLRLEGNRLTCLPPEVHFLTSLTYLDLSNNAIEEL-----DGE 115

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
           +   L  L      N     S   E+ I   T L+     L+L+  +L  +P+ +     
Sbjct: 116 SLGRLTNLTHLSLRNNPKSFSFIPEE-IGRLTSLTF----LNLQHCSLVELPAGVGLLLN 170

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L L+ N +  LP E+ SC SL  L L  N +++ P AI   L+ +  L+L NN + Q
Sbjct: 171 LKQLILNNNRLLLLPQEIGSCTSLTHLRLHENLLEEVPKAI-GRLTLMQDLRLFNNNILQ 229

Query: 442 VPSD-GF-KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
           +P + GF K +P  +I   S  +ASLP       L  L +L L    L   P  I  L  
Sbjct: 230 LPVELGFMKYLPSFRIS--SNQLASLPIG--IGGLESLTDLLLSDNFLEFLPPQIGLLTS 285

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +  L  S N LQ +P    NL+S+TEL +S+N ++ LPP
Sbjct: 286 ITRLRASSNRLQELPAELGNLSSMTELGVSNNQLTQLPP 324



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLS 427
           S IP  +WE   +  L L  N + ++PPE+   +SL  L +  N ++  P+ +   T+L 
Sbjct: 16  SPIPVSLWELNVLKTLQLDHNQLDDIPPEIEQLSSLTKLRVDCNNLEALPETLGQRTTLK 75

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR--M 485
            LS L+L+ N L  +P +    +  L  LDLS N     +      L +L  L LR    
Sbjct: 76  YLS-LRLEGNRLTCLPPE-VHFLTSLTYLDLSNNAIEELDGESLGRLTNLTHLSLRNNPK 133

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
                P +I RL  L  L+L   SL  +P G   L +L +L L++N +  LP E+ S
Sbjct: 134 SFSFIPEEIGRLTSLTFLNLQHCSLVELPAGVGLLLNLKQLILNNNRLLLLPQEIGS 190


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 195/416 (46%), Gaps = 51/416 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS + L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + NN  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 68/417 (16%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM- 185
           K L  +L    ++ +   S   + +LP  +     + KLD+ GN+ T+LS  +   W + 
Sbjct: 31  KNLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEI---WQLK 87

Query: 186 -LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L +L  + N L  +P+ IG L  L  L LH N ++++P  I    +L +  + NN L+ 
Sbjct: 88  DLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTV 147

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L SN+L     E  QL+ L  LDL+NN  + +  E+  + TL  L
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENL 207

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+T+         P  ++ L+S                            K L 
Sbjct: 208 DLRSNKLKTI---------PKEIRQLKSL---------------------------KVLM 231

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L G  L+++P EI +   +  L+L  N  Q  P E+    +L  L L  N++ ++P  + 
Sbjct: 232 LTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEV- 290

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
             L SL  L L +N +  +P +                          + LP LQEL+L 
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVE-------------------------VTQLPDLQELHLS 325

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             ++   P +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL++N  + +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 179/388 (46%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N L
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEL 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNELTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL+ N ++ +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 179/388 (46%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DIRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N L
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEL 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNELTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 5/163 (3%)

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            +I  LDLS   ++ LP ++    +LQ L L  N+       I   L  L  L L+NN L
Sbjct: 41  ADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKL 99

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
             +P +    +  LQ L L  N + +LP+        +LQ+L L   +L   P +I +LQ
Sbjct: 100 TVLPKE-IGQLQNLQELSLHSNELVNLPKE--IGQFKNLQKLNLDNNKLTVLPKEIGQLQ 156

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            L+ L L  N L S+P   + L SL  LDL+ N ++ +  E++
Sbjct: 157 NLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVM 199


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 135/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 661 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 720

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 721 IPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSIL 780

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 781 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKE 839

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L         L+L  L LS+N
Sbjct: 840 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTLKLKALWLSDN 899



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 141/276 (51%), Gaps = 8/276 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 616 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYL 675

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L + D  +N+L  LP ++G   NL D     N +  +P+++ +   +  LD
Sbjct: 676 PESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLD 735

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL  L    I   T LT+L+ S+NLL  +P+ IG L +L  L + QN+++ +  SI
Sbjct: 736 VSENKLECLPEE-INGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSI 794

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +GKL KL  L+   N+L    KE  +  C   L+V  +
Sbjct: 795 GDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKE--IGGC-CSLNVFSV 851

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            +N LS +P EI + T L  L + GN L  L  SL 
Sbjct: 852 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLT 887



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 182/376 (48%), Gaps = 41/376 (10%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 564 FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 623

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 624 NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 683

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 684 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 742

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLS 278
            +P  I+G  SL +  +  N L  LP  +GKL KL  L +  N+L +    +  C+  L+
Sbjct: 743 CLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCE-SLT 801

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L+ N L  LP  IGK+  L       N L   R+ L++ P                 
Sbjct: 802 ELVLTENQLQILPKSIGKLKKL-------NNLNADRNKLISLP----------------- 837

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                 KE  I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  
Sbjct: 838 ------KE--IGGCCSLNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFS 885

Query: 399 LSSCASLQTLILSRNK 414
           L++   L+ L LS N+
Sbjct: 886 LTTL-KLKALWLSDNQ 900



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LDL +N I  IP SIS C +L       N L+ L
Sbjct: 570 LRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRL 629

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P    +L  L                 C   LSV D+S   L  LP  IG +  L  L L
Sbjct: 630 PESFPELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLEL 667

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
             N L  L  SL      A L+ L    L  NE      T   L  +        K+L L
Sbjct: 668 RENLLTYLPESL------AQLQRLEELDLGNNELYHLPETIGALFNL--------KDLWL 713

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  L+ IP E+     +  LD+S N ++ LP E++   SL  L++S+N ++  PD I  
Sbjct: 714 DGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGI-G 772

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+ +D   D   L  L L+ N +  LP++     L  L  L   
Sbjct: 773 KLRKLSILKVDQNKLIQL-TDSIGDCESLTELVLTENQLQILPKS--IGKLKKLNNLNAD 829

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N ++ LP  L ++
Sbjct: 830 RNKLISLPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTL 889



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LDLSRN I E+P  +S C +LQ    S N + 
Sbjct: 568 VKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLT 627

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       +    +  L+
Sbjct: 628 RLPES-FPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLE 686

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N +  LPE     +L +L++L+L   QL E P ++  L+ L  LD+S+N L+ +
Sbjct: 687 ELDLGNNELYHLPET--IGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECL 744

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  LP
Sbjct: 745 PEEINGLTSLTDLLVSQNLLQVLP 768



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 15/253 (5%)

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--- 352
           ++  LRKL L+ N ++ L   + N      L   R+ +PE  +S +      +   +   
Sbjct: 566 QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNP 625

Query: 353 -TRLSVTSKE------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            TRL  +  E      LS+  ++L A+P  I     +  L+L  N +  LP  L+    L
Sbjct: 626 LTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRL 685

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           + L L  N++   P+ I  +L +L  L LD N L ++P +   ++  L  LD+S N +  
Sbjct: 686 EELDLGNNELYHLPETI-GALFNLKDLWLDGNQLAEIPQE-VGNLKNLLCLDVSENKLEC 743

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           LPE    + L  L +L + +  L+  P  I +L++L IL + QN L  + +   +  SLT
Sbjct: 744 LPEE--INGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLT 801

Query: 525 ELDLSDNNISALP 537
           EL L++N +  LP
Sbjct: 802 ELVLTENQLQILP 814



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           ++ PF  L  L++L L   +++  P +I    QL  LDLS+N +  IPE      +L   
Sbjct: 560 DDQPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVA 619

Query: 527 DLSDNNISALP---PEL 540
           D S N ++ LP   PEL
Sbjct: 620 DFSGNPLTRLPESFPEL 636


>gi|414886758|tpg|DAA62772.1| TPA: putative leucine-rich repeat receptor-like protein kinase
           family protein [Zea mays]
          Length = 1260

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 256/519 (49%), Gaps = 38/519 (7%)

Query: 38  GDKWWEAVDLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKS 95
           G    E+  ++ L+L+ NN   ++ E L     LT L +++N LS  +PAA+GEL  L  
Sbjct: 340 GGDEAESSSIEHLMLSMNNFTGEIPEGLSRCRALTQLGLANNSLSGVIPAALGELGNLTD 399

Query: 96  LDVSFNSI-MKIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-L 152
           L ++ NS+  ++P E+ + T L       N+L   LP ++GR +NL +     N  T  +
Sbjct: 400 LVLNNNSLSGELPPELFNLTELQTLALYHNKLSGRLPDAIGRLVNLEELYLYENQFTGEI 459

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGM--PETIGSLS 207
           PE + DC+ +  +D  GN+    + ++ AS   L++LI     +N L+G+  PE +G   
Sbjct: 460 PESIGDCASLQMIDFFGNRF---NGSIPASMGNLSQLIFLDFRQNELSGVIAPE-LGECQ 515

Query: 208 RLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQL 265
           +L  LDL  N +  SIP +     SL +F + NN+LS A+P  + +   +  +++  N+L
Sbjct: 516 QLKILDLADNALSGSIPETFGKLRSLEQFMLYNNSLSGAIPDGMFECRNITRVNIAHNRL 575

Query: 266 KEYCVEAC-QLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
               +  C   RL   D +NNS  G +P + G+ + L+++         L S++++GP P
Sbjct: 576 SGSLLPLCGTARLLSFDATNNSFDGAIPAQFGRSSGLQRV--------RLGSNMLSGPIP 627

Query: 324 ALLKYLRSRLPENEDSEASTTK-EDLITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGE 381
             L  + +    +  S A T      +   T LS V      L G    AIP  +    +
Sbjct: 628 PSLGGITALTLLDVSSNALTGGFPATLAQCTNLSLVVLSHNRLSG----AIPDWLGSLPQ 683

Query: 382 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           + +L LS N     +P +LS+C++L  L L  N+I       L SL+SL+ L L +N L 
Sbjct: 684 LGELTLSNNEFTGAIPVQLSNCSNLLKLSLDNNQINGTVPPELGSLASLNVLNLAHNQLS 743

Query: 441 -QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY-LRRMQLR-EAPTDILRL 497
            Q+P+   K +  L  L+LS N  S P  P  S L  LQ L  L         P  +  L
Sbjct: 744 GQIPTTVAK-LSSLYELNLSQNYLSGPIPPDISKLQELQSLLDLSSNNFSGHIPASLGSL 802

Query: 498 QQLRILDLSQNSL-QSIPEGFKNLTSLTELDLSDNNISA 535
            +L  L+LS N+L  ++P     ++SL +LDLS N +  
Sbjct: 803 SKLEDLNLSHNALVGAVPSQLAGMSSLVQLDLSSNQLEG 841



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 213/515 (41%), Gaps = 77/515 (14%)

Query: 45  VDLQKLILAHNN-IEKLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNS 102
             LQKL L +N+ +  +  +L  L  L  LN+ +N+L+  +P  +  L  + ++D+S N 
Sbjct: 246 AGLQKLNLGNNSLVGAIPPELGALGELQYLNLMNNRLTGRVPRTLAALSRVHTIDLSGNM 305

Query: 103 I-MKIPDEIGSATALVKFDCSSNQL-KELPSSL--GRCLNLSDFK----ASNNCITSLPE 154
           +   +P E+G    L     S NQL   +P  L  G     S  +    + NN    +PE
Sbjct: 306 LSGALPAELGRLPQLTFLVLSDNQLTGSVPGDLCGGDEAESSSIEHLMLSMNNFTGEIPE 365

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLD 213
            L+ C  +++L +  N L+ +    +     LT+L+ + N L+G +P  + +L+ L  L 
Sbjct: 366 GLSRCRALTQLGLANNSLSGVIPAALGELGNLTDLVLNNNSLSGELPPELFNLTELQTLA 425

Query: 214 LHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+ N++   +P +I    +L E Y+  N  +  +P  +G  + L  +D   N+     + 
Sbjct: 426 LYHNKLSGRLPDAIGRLVNLEELYLYENQFTGEIPESIGDCASLQMIDFFGNRFNG-SIP 484

Query: 272 ACQLRLS---VLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           A    LS    LD   N LSG + PE+G+   L+ L L  N L        +G  P    
Sbjct: 485 ASMGNLSQLIFLDFRQNELSGVIAPELGECQQLKILDLADNAL--------SGSIPETFG 536

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LRS              E  +     LS              AIP  ++E   IT++++
Sbjct: 537 KLRS-------------LEQFMLYNNSLS-------------GAIPDGMFECRNITRVNI 570

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           + N +      L   A L +   + N       A     S L  ++L +N L        
Sbjct: 571 AHNRLSGSLLPLCGTARLLSFDATNNSFDGAIPAQFGRSSGLQRVRLGSNMLSGPIPPSL 630

Query: 448 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
             I  L +LD+S N  +                          P  + +   L ++ LS 
Sbjct: 631 GGITALTLLDVSSNALT-----------------------GGFPATLAQCTNLSLVVLSH 667

Query: 508 NSLQ-SIPEGFKNLTSLTELDLSDNNIS-ALPPEL 540
           N L  +IP+   +L  L EL LS+N  + A+P +L
Sbjct: 668 NRLSGAIPDWLGSLPQLGELTLSNNEFTGAIPVQL 702



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 219/510 (42%), Gaps = 62/510 (12%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIM--KIPDEIGSATALVKFDCSS-NQLKELPSSLGRCL 137
            ++PA++G L  L+ L +  N  +   IPD +G    L     +S N    +P+SL R  
Sbjct: 139 GQIPASLGALSALQVLRLGDNPGLSGAIPDALGKLGNLTVLGLASCNLTGPIPASLVRLD 198

Query: 138 NLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNL 195
            L+      N ++  +P  LA  + +  L + GN+LT      + +   L +L + + +L
Sbjct: 199 ALTALNLQQNALSGPIPRGLAGLASLQALALAGNQLTGAIPPELGTLAGLQKLNLGNNSL 258

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPAELGKLS 253
           +  +P  +G+L  L  L+L  NR+   +P +++    +    +  N LS ALPAELG+L 
Sbjct: 259 VGAIPPELGALGELQYLNLMNNRLTGRVPRTLAALSRVHTIDLSGNMLSGALPAELGRLP 318

Query: 254 KLGTLDLHSNQL-----KEYCV--EACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLL 305
           +L  L L  NQL      + C   EA    +  L LS N+ +G +P  + +   L +L L
Sbjct: 319 QLTFLVLSDNQLTGSVPGDLCGGDEAESSSIEHLMLSMNNFTGEIPEGLSRCRALTQLGL 378

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
             N L        +G  PA L  L   + L  N +S +     +L  + T L    + L+
Sbjct: 379 ANNSL--------SGVIPAALGELGNLTDLVLNNNSLSGELPPELFNL-TEL----QTLA 425

Query: 364 LEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
           L    LS  +P  I     + +L L  N    E+P  +  CASLQ +    N+      A
Sbjct: 426 LYHNKLSGRLPDAIGRLVNLEELYLYENQFTGEIPESIGDCASLQMIDFFGNRFNGSIPA 485

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQE 479
            + +LS L  L    N L  V +    +   L+ILDL+ N    S+PE   F  L  L++
Sbjct: 486 SMGNLSQLIFLDFRQNELSGVIAPELGECQQLKILDLADNALSGSIPET--FGKLRSLEQ 543

Query: 480 LYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ------------------------SIP 514
             L    L  A P  +   + +  ++++ N L                         +IP
Sbjct: 544 FMLYNNSLSGAIPDGMFECRNITRVNIAHNRLSGSLLPLCGTARLLSFDATNNSFDGAIP 603

Query: 515 EGFKNLTSLTELDLSDNNISA-LPPELVSV 543
             F   + L  + L  N +S  +PP L  +
Sbjct: 604 AQFGRSSGLQRVRLGSNMLSGPIPPSLGGI 633


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 142/276 (51%), Gaps = 8/276 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L + D  +N L  LP ++G   NL D     N +  LP+++     +  LD
Sbjct: 167 PESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR++ +  ++
Sbjct: 227 ISENKLERLPEE-ISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAV 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +G+L KL  L++  N+L    KE  +  C   L+V  +
Sbjct: 286 GDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKE--IGGC-CSLNVFSV 342

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            +N LS +PPEI + T L  L + GN L  L  SL 
Sbjct: 343 RDNRLSRIPPEISQATELHVLDVAGNRLLHLPMSLT 378



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 8/258 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E +  L  L  L++ +N L  LP  IG L+ LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIGS   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 212 LPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L+   +     LTEL+ ++N L  +P++IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLVQLT-EAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFSVRDNRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTSLKLKALWLSDN 390

Query: 286 SLSGL-------PPEIGK 296
               L        PEIG+
Sbjct: 391 QSQPLLTFQTDTDPEIGE 408



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 193/408 (47%), Gaps = 52/408 (12%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+          + ++  E  K +++ V L+KL L+ N I++L  ++ N  
Sbjct: 23  SLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S N + E+P +I     L+  D S N + ++P+       L     +   L+ 
Sbjct: 83  QLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP ++G   NL+  +   N +T LPE +A   ++ +LD+  N L  L   + A +  L +
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYN-LKD 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P+ IGSL  L+ LD+ +N++  +P  ISG  SL +  +  N L  LP  
Sbjct: 202 LWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDG 261

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +GKL KL  L +  N+L +    V  C+  L+ L L+ N L  LP  IG++  L      
Sbjct: 262 IGKLKKLSILKVDQNRLVQLTEAVGDCE-SLTELVLTENQLLTLPKSIGRLKKL------ 314

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L   R+ LV+ P                       KE  I     L+V     S+  
Sbjct: 315 -NVLNVDRNKLVSLP-----------------------KE--IGGCCSLNV----FSVRD 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
             LS IP EI +A E+  LD++ N +  LP  L+S   L+ L LS N+
Sbjct: 345 NRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTS-LKLKALWLSDNQ 391



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 20/352 (5%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCK 105

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L     S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NLL 
Sbjct: 106 SLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPEN-IGNLYNLASLELRENLLT 164

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE++  L RL  LDL  N + ++P +I    +L + ++  N L+ LP E+G L  L  
Sbjct: 165 YLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLC 224

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LD+  N+L+    E   L  L+ L +S N L  LP  IGK+  L  L +  N L  L  +
Sbjct: 225 LDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEA 284

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPS 374
           +  G   +L             +E   T+  L+T+   +    K   L+++   L ++P 
Sbjct: 285 V--GDCESL-------------TELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPK 329

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           EI     +    +  N +  +PPE+S    L  L ++ N++   P + LTSL
Sbjct: 330 EIGGCCSLNVFSVRDNRLSRIPPEISQATELHVLDVAGNRLLHLPMS-LTSL 380



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 177/412 (42%), Gaps = 68/412 (16%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVELIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLVKLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C SL       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L  L                 C   LSV D+S   L  LP  IG +  L  L L  N L
Sbjct: 126 ELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLELRENLL 163

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
             L  S+      A L+ L          E      DL  +   +      K+L L+G  
Sbjct: 164 TYLPESV------AQLQRL---------EELDLGNNDLYNLPETIGALYNLKDLWLDGNQ 208

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I   L  
Sbjct: 209 LAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGI-GKLKK 267

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           LS LK+D N L Q+ ++   D                           L EL L   QL 
Sbjct: 268 LSILKVDQNRLVQL-TEAVGDC------------------------ESLTELVLTENQLL 302

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P  I RL++L +L++ +N L S+P+      SL    + DN +S +PPE+
Sbjct: 303 TLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDNRLSRIPPEI 354



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 5/191 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S + +EL L+   L  +P   ++  ++ KL LS N IQ LPPE+++   L  L LSRN
Sbjct: 33  RYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRN 92

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I + P++I +   SL       NPL ++P + F ++  L  L ++  ++ +LPEN    
Sbjct: 93  DIPEIPESI-SFCKSLQVADFSGNPLTRLP-ESFPELQNLTCLSVNDISLQALPEN--IG 148

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           +L +L  L LR   L   P  + +LQ+L  LDL  N L ++PE    L +L +L L  N 
Sbjct: 149 NLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQ 208

Query: 533 ISALPPELVSV 543
           ++ LP E+ S+
Sbjct: 209 LAELPQEIGSL 219


>gi|327266826|ref|XP_003218205.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Anolis carolinensis]
          Length = 612

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 233/542 (42%), Gaps = 117/542 (21%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++L+N+ L  +P +V+             +  DL++L L  N IE + E +  L  + VL
Sbjct: 71  VDLANKKLTAIPCQVF-------------DLKDLEELHLERNMIESIPESIDQLKNVKVL 117

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI----MKIPDEIGSATALVKFDCSSNQLKEL 129
            ++ N +  L    GEL  L++LD+S N +    + I  ++ +   L  +D +   L E 
Sbjct: 118 YLNKNNIGTLCKEFGELKCLQNLDLSNNPLSCDSLNIVSKLRALCQLRLYDVN---LDEF 174

Query: 130 PSSLGRCLNLSDFKA-SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P  + + L+       S N +T LP+++ + +K++++ ++ NK                 
Sbjct: 175 PVEICKHLHHLKLLGLSTNNLTCLPKEVVNMTKLTEIYLKSNKF---------------- 218

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      P+ +  L  L  +DL +N + SIP  I     LA+F++  N+L+A+P  
Sbjct: 219 --------ENFPQELCHLYNLEIIDLEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDT 270

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L K SKL                      S+LDLSNN L  LP  + ++T +++  L+GN
Sbjct: 271 LSKCSKL----------------------SILDLSNNLLHKLPRSLKELTEIKEFGLSGN 308

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           PL            P  ++  RS                LI +            L+   
Sbjct: 309 PLANF---------PRQIRRWRS----------------LIVVY-----------LKNCT 332

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +   + +   +  LDLS N +   P E+ +  +L+ L L  N+I + P  +   LS 
Sbjct: 333 LQMVHPSLAKLTNMMILDLSENLLDTFPREICTMENLEVLALDDNQITEVPPEV-HRLSR 391

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-------NIASLPENPPFSSLPHLQELY 481
           L CL L +N     P + F     LQ L+  Y        +A LPEN   S L +L+ELY
Sbjct: 392 LKCLGLTSNRFAWFPEEIFH----LQSLEKLYMGQDKGTKLADLPEN--ISQLQNLKELY 445

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L +  L   PT I  L  L ILD   N L  +P+    L  L +L L  N +  LP  L 
Sbjct: 446 LEKNDLEYLPTSIGLLNNLEILDCHNNFLIELPDSICRLQGLQKLLLHSNQLFQLPENLD 505

Query: 542 SV 543
           S+
Sbjct: 506 SL 507



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 157/374 (41%), Gaps = 41/374 (10%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           NN+  L +++ N+  LT + +  NK    P  +  L+ L+ +D+  N +  IP+EI S  
Sbjct: 193 NNLTCLPKEVVNMTKLTEIYLKSNKFENFPQELCHLYNLEIIDLEKNELNSIPEEICSLK 252

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L +F  + N L  +P +L +C  LS    SNN +  LP  L + +++ +  + GN L  
Sbjct: 253 RLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLHKLPRSLKELTEIKEFGLSGNPLAN 312

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                I  W  L  +      L  +  ++  L+ ++ LDL +N + + P  I    +L  
Sbjct: 313 FPRQ-IRRWRSLIVVYLKNCTLQMVHPSLAKLTNMMILDLSENLLDTFPREICTMENLEV 371

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGL 290
             + +N ++ +P E+ +LS+L  L L SN+   +  E   L    +L +       L+ L
Sbjct: 372 LALDDNQITEVPPEVHRLSRLKCLGLTSNRFAWFPEEIFHLQSLEKLYMGQDKGTKLADL 431

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  I ++  L++L L  N L  L +S                                I 
Sbjct: 432 PENISQLQNLKELYLEKNDLEYLPTS--------------------------------IG 459

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           +   L +    L      L  +P  I     + KL L  N + +LP  L S   LQ L L
Sbjct: 460 LLNNLEI----LDCHNNFLIELPDSICRLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSL 515

Query: 411 SRNKIKDWPDAILT 424
             N + D P  + +
Sbjct: 516 EGNPLMDPPVEVFS 529



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 17/335 (5%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+  +DL   ++ +IP  +     L E ++  N + ++P  + +L  +  L L+ N +  
Sbjct: 67  RIFFVDLANKKLTAIPCQVFDLKDLEELHLERNMIESIPESIDQLKNVKVLYLNKNNIGT 126

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
            C E  +L+ L  LDLSNN LS     +  ++ LR L      LR    +L   P     
Sbjct: 127 LCKEFGELKCLQNLDLSNNPLSC--DSLNIVSKLRALC----QLRLYDVNLDEFPVEICK 180

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                +L     +  +   ++++ M T+L+    E+ L+       P E+     +  +D
Sbjct: 181 HLHHLKLLGLSTNNLTCLPKEVVNM-TKLT----EIYLKSNKFENFPQELCHLYNLEIID 235

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L +N +  +P E+ S   L    ++ N +   PD  L+  S LS L L NN L ++P   
Sbjct: 236 LEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDT-LSKCSKLSILDLSNNLLHKLPR-S 293

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
            K++  ++   LS N +A+ P          L  +YL+   L+     + +L  + ILDL
Sbjct: 294 LKELTEIKEFGLSGNPLANFPRQ--IRRWRSLIVVYLKNCTLQMVHPSLAKLTNMMILDL 351

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           S+N L + P     + +L  L L DN I+ +PPE+
Sbjct: 352 SENLLDTFPREICTMENLEVLALDDNQITEVPPEV 386


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P E+ K               +L+ L L  N + +L + +  L  LT L
Sbjct: 88  LHLEDNELSDLPEELVK-------------CSNLKILDLRLNLLTRLPDVVTRLSSLTHL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +    L++LP  I +L  L+SLDV  N +  +P  I     L + D   N+L  LP ++
Sbjct: 135 YLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNM 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L D    +N ++++P+ L  C  +  LDV  N LT L    I     L EL  ++
Sbjct: 195 GSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKE-IGDLEQLCELSIAE 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P +IG L  L+ L    N +  +  +I  C SL E Y+ NN L+ LPA +G L 
Sbjct: 254 NRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +L  L +  NQL+E    +  C  +LS+L L  N L  LP E+G++  LR L L  N L 
Sbjct: 314 ELSVLSIDENQLEEIPSAIGGCS-KLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILA 372

Query: 312 TL 313
            L
Sbjct: 373 FL 374



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L   ++ +L  D+  L  L  L+V  N+L  LP AI +L  L+ LD+  N +  +
Sbjct: 131 LTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHL 190

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +GS   L       N L  +P SL  C +L     S N +T+LP+++ D  ++ +L 
Sbjct: 191 PLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELS 250

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N++  L N+ I     L  L A  N L  +  TIG  S L+ L L  N++ ++P++I
Sbjct: 251 IAENRIAALPNS-IGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATI 309

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
            G   L+   +  N L  +P+ +G  SKL  L L  N+L+E  +E  +L  L VLDL +N
Sbjct: 310 GGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDN 369

Query: 286 SLSGLPPEIGKMTTLRKLLLT 306
            L+ LP  I  +  LR L L+
Sbjct: 370 ILAFLPFTINVLFNLRALWLS 390



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 172/377 (45%), Gaps = 38/377 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N I ++ E L     L  L++  NK+  +P AIG L  L+ L +  N +  +
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+   + L   D   N L  LP  + R  +L+        +T LP D+     +  LD
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLD 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L +L    I     L EL   +N L+ +P  +GSL  L  L +  N + ++P S+
Sbjct: 159 VRENQLRILP-PAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSL 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           + C  L    +  N L+ALP E+G L +L  L +  N++        +L+ L  L   +N
Sbjct: 218 TSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ L P IG+ ++L +L L  N L TL         PA +  L+               
Sbjct: 278 ALTELVPTIGECSSLLELYLFNNQLTTL---------PATIGGLK--------------- 313

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                    LSV    LS++   L  IPS I    +++ L L  N ++ELP E+   A+L
Sbjct: 314 --------ELSV----LSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANL 361

Query: 406 QTLILSRNKIKDWPDAI 422
           + L L  N +   P  I
Sbjct: 362 RVLDLCDNILAFLPFTI 378



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S + L EL    N +  +PE +    +L  L L QN+IL +P +I    +L E ++ +N 
Sbjct: 35  SASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNE 94

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           LS LP EL K S L  LDL  N L        +L  L+ L L   SL+ LPP+I ++  L
Sbjct: 95  LSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNL 154

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS 359
           R L +  N LR L       P    LK+LR   L  NE S        L  +        
Sbjct: 155 RSLDVRENQLRIL------PPAICQLKHLRELDLGRNELSHLPLNMGSLEVL-------- 200

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L ++   LSA+P  +   G +  LD+S+N +  LP E+     L  L ++ N+I   P
Sbjct: 201 EDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALP 260

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
           ++I   L +L  LK D+N L ++                          P       L E
Sbjct: 261 NSI-GRLKNLVTLKADSNALTELV-------------------------PTIGECSSLLE 294

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL   QL   P  I  L++L +L + +N L+ IP      + L+ L L  N +  LP E
Sbjct: 295 LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLE 354

Query: 540 L 540
           +
Sbjct: 355 V 355



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQT 407
            T + R+ V  K       NL  +P+E+  +   + +L L  N I E+P  L  C  L++
Sbjct: 9   FTCSGRVDVIEKR----QCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP 466
           L L +NKI   P AI  SL +L  L L++N L  +P +  K    L+ILDL  N+   LP
Sbjct: 65  LSLGQNKILRVPPAI-GSLIALEELHLEDNELSDLPEELVK-CSNLKILDLRLNLLTRLP 122

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +    + L  L  LYL    L + P DI +LQ LR LD+ +N L+ +P     L  L EL
Sbjct: 123 D--VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 527 DLSDNNISALP 537
           DL  N +S LP
Sbjct: 181 DLGRNELSHLP 191



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 401 SCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 459
           +C+    +I  R   + + P  +  S S L  L LD N + ++P +G      L+ L L 
Sbjct: 10  TCSGRVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIP-EGLCRCKKLRSLSLG 68

Query: 460 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 518
            N I  +P  P   SL  L+EL+L   +L + P ++++   L+ILDL  N L  +P+   
Sbjct: 69  QNKILRVP--PAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVT 126

Query: 519 NLTSLTELDLSDNNISALPPEL 540
            L+SLT L L + +++ LPP++
Sbjct: 127 RLSSLTHLYLFETSLTQLPPDI 148



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ELYL   Q+ E P  + R ++LR L L QN +  +P    +L +L EL L DN +S L
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 537 PPELV 541
           P ELV
Sbjct: 99  PEELV 103



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
            E   L +L L +N +  L   +  L  L+VL++  N+L E+P+AIG    L  L +  N
Sbjct: 287 GECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGN 346

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
            + ++P E+G    L   D   N L  LP ++    NL
Sbjct: 347 RLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNL 384


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + +
Sbjct: 152 NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+GS  +L+  D S N+++ LP  LG  L+L+D   S N I +LPE +    K+S L
Sbjct: 212 IPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+LT L  + I +   LTEL+ ++N +  +P +IG L RL   +  +N++ S+P  
Sbjct: 272 KADQNRLTYLPES-IGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GC +L  F +  N L  +P+EL + ++L  LD+  N+L    +    LRL  L LS N
Sbjct: 331 IGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITLRLKALWLSVN 390



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 186/418 (44%), Gaps = 72/418 (17%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL  VP+E+Y+           +E   L++L+L  N +  L +    L  L  L +S N+
Sbjct: 23  SLLYVPDEIYR-----------YER-SLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNE 70

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN--------------- 124
           +  LP  I     L  LDVS N IM+IP+ I   TAL   D S N               
Sbjct: 71  IQRLPPEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPELRNL 130

Query: 125 --------QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                    L+ LP ++G   NL   +   N +T LPE L+   ++ +LD+  N+L  L 
Sbjct: 131 TCLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLP 190

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++ I     L +L    N LN +P  +GS+  L+ +D+ +N+I  +P  + G  SLA+  
Sbjct: 191 DS-IGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLL 249

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +  N + ALP  +GKL K                      LS+L    N L+ LP  IG 
Sbjct: 250 VSQNLIDALPESIGKLKK----------------------LSILKADQNRLTYLPESIGN 287

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
             +L +L+LT N +++L  S+  G    L  +       N D    T+    I     L+
Sbjct: 288 CESLTELVLTENRIQSLPRSI--GKLKRLSNF-------NCDRNQLTSLPKEIGGCQALN 338

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           V      +    L  IPSE+ +A E+  LD+S N +  LP  L +   L+ L LS N+
Sbjct: 339 V----FCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLIT-LRLKALWLSVNQ 391



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 23/362 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +   + L   D   N L        +LR L+ L +++ SL  LP  IG +T L  L 
Sbjct: 98  PESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSINDISLQVLPENIGNLTNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L  L  SL      ++L  L          E      +L ++   +   V  K+L
Sbjct: 158 LRENLLTFLPESL------SMLHRL---------EELDLGNNELYSLPDSIGHLVGLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L+G  L+ IP+E+     +  +D+S N IQ LP EL    SL  L++S+N I   P++I
Sbjct: 203 WLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESI 262

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  LS LK D N L  +P +   +   L  L L+ N I SLP +     L  L    
Sbjct: 263 -GKLKKLSILKADQNRLTYLP-ESIGNCESLTELVLTENRIQSLPRS--IGKLKRLSNFN 318

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             R QL   P +I   Q L +  + +N L  IP      T L  LD+S N +  LP  L+
Sbjct: 319 CDRNQLTSLPKEIGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLI 378

Query: 542 SV 543
           ++
Sbjct: 379 TL 380



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R ++ L  L L  N L+ +P+ F  L  L +L LSDN I 
Sbjct: 13  HVEVVDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|291395454|ref|XP_002714052.1| PREDICTED: ERBB2 interacting protein [Oryctolagus cuniculus]
          Length = 1399

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISIEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLISIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLISIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IG+   +  L LH N++  +P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 186/427 (43%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L                      LP    S  + T     
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL--------------------PELPREIGSCKNVTV---- 354

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                       +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 355 ------------MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 197/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I  C ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250


>gi|312190384|gb|ADQ43184.1| leucine-rich receptor kinase [Eutrema parvulum]
          Length = 1141

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 250/558 (44%), Gaps = 64/558 (11%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-----LTVLNVSHNKLS-E 82
           Y NF      D +  +  LQ L L++NNI      L  +PL     L+ L+ S N +S  
Sbjct: 163 YNNFTGKLPEDVFLGSKKLQTLDLSYNNITGSISGL-TIPLSSCVSLSFLDFSGNSISGY 221

Query: 83  LPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKE-LPSSLG-RCLNL 139
           +P ++     LKSL++S+N+   +IP   G   +L   D S NQL   +P ++G  C  L
Sbjct: 222 IPDSLINCTNLKSLNLSYNNFDGQIPKSFGELKSLQSLDLSHNQLTGWIPPAIGDACGTL 281

Query: 140 SDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTV-LSNNLIASWTMLTELIASKNLLN 197
            + + S N +T  +P+ L+ CS +  LD+  N ++    N ++ S+  L  L+ S N ++
Sbjct: 282 QNLRISYNNVTGVIPDSLSSCSWLQILDLSNNNISGPFPNRILRSFGSLQILLLSNNFIS 341

Query: 198 G-MPETIGSLSRLIRLDLHQNRILSI--PSSISGCCSLAEFYMGNNALSA-LPAELGKLS 253
           G  P TI +   L  +D   NR   +  P    G  SL E  + +N ++  +P  + + S
Sbjct: 342 GEFPPTISACKTLRIVDFSSNRFSGVIPPDLCPGAASLEELRIPDNLVTGDIPPAISQCS 401

Query: 254 KLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L T+DL  N L       +   Q     +   NN    +PPEIGK+  L+ L+L  N L
Sbjct: 402 ELRTIDLSLNYLNGTIPPEIGKLQKLEQFIAWYNNISGNIPPEIGKLQNLKDLILNNNQL 461

Query: 311 RT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
              +     N      + +  +RL             D   + +RL+V    L L   N 
Sbjct: 462 TGEIPPEFFNCSNIEWISFTSNRL-------TGEVPRDFGNL-SRLAV----LQLGNNNF 509

Query: 370 SA-IPSEIWEAGEITKLDLSRNSIQ-ELPPE---------LSSCASLQTLILSRNKIKDW 418
           +  IPSE+ +   +  LDL+ N +  E+PP          LS   S  T+   RN     
Sbjct: 510 TGEIPSELGKCTTLVWLDLNTNHLTGEIPPRLGRQPGSKALSGLLSGNTMAFVRNVGNSC 569

Query: 419 -------------PDAILT--SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
                        P+ +L   SL S    ++ + P+  +    F     ++ LDLSYN  
Sbjct: 570 KGVGGLVEFSGIRPERLLQIPSLKSCDFTRMYSGPILSL----FTRYQTIEYLDLSYNQL 625

Query: 464 SLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLT 521
               +     +  LQ L L   QL  E P+ I +L+ L + D S N LQ  IPE F NL+
Sbjct: 626 RGKISDEIGEMIALQVLELSHNQLSGEIPSTIGQLKNLGVFDASDNRLQGQIPESFSNLS 685

Query: 522 SLTELDLSDNNISALPPE 539
            L ++DLS+N ++   P+
Sbjct: 686 FLVQIDLSNNELTGPIPQ 703



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 64/292 (21%)

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPS 131
           N+S N    +P  IG+L  LK L ++ N +  +IP E  + + +     +SN+L  E+P 
Sbjct: 436 NISGN----IPPEIGKLQNLKDLILNNNQLTGEIPPEFFNCSNIEWISFTSNRLTGEVPR 491

Query: 132 SLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLT----------------- 173
             G    L+  +  NN  T  +P +L  C+ +  LD+  N LT                 
Sbjct: 492 DFGNLSRLAVLQLGNNNFTGEIPSELGKCTTLVWLDLNTNHLTGEIPPRLGRQPGSKALS 551

Query: 174 -VLSNNLIASWTMLTELIASKNLLNGMPETIG---------------SLSRLI------- 210
            +LS N +A    +  +  S   + G+ E  G                 +R+        
Sbjct: 552 GLLSGNTMA---FVRNVGNSCKGVGGLVEFSGIRPERLLQIPSLKSCDFTRMYSGPILSL 608

Query: 211 --------RLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDL 260
                    LDL  N++   I   I    +L    + +N LS  +P+ +G+L  LG  D 
Sbjct: 609 FTRYQTIEYLDLSYNQLRGKISDEIGEMIALQVLELSHNQLSGEIPSTIGQLKNLGVFDA 668

Query: 261 HSNQLKEYCVEACQLRLSVL---DLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             N+L+    E+    LS L   DLSNN L+G  P+ G+++TL       NP
Sbjct: 669 SDNRLQGQIPESFS-NLSFLVQIDLSNNELTGPIPQRGQLSTLPASQYANNP 719



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           ++ L L++N +  K+ +++  +  L VL +SHN+LS E+P+ IG+L  L   D S N + 
Sbjct: 615 IEYLDLSYNQLRGKISDEIGEMIALQVLELSHNQLSGEIPSTIGQLKNLGVFDASDNRLQ 674

Query: 105 -KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN---CITSLPE 154
            +IP+   + + LV+ D S+N+L       G+   L   + +NN   C   LPE
Sbjct: 675 GQIPESFSNLSFLVQIDLSNNELTGPIPQRGQLSTLPASQYANNPGLCGVPLPE 728



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 13/171 (7%)

Query: 381 EITKLDLSRN----SIQELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLD 435
           ++  LDLS N    SI  L   LSSC SL  L  S N I  + PD+ L + ++L  L L 
Sbjct: 180 KLQTLDLSYNNITGSISGLTIPLSSCVSLSFLDFSGNSISGYIPDS-LINCTNLKSLNLS 238

Query: 436 -NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS-SLPHLQELYLRRMQLREA-PT 492
            NN   Q+P   F ++  LQ LDLS+N  +    P    +   LQ L +    +    P 
Sbjct: 239 YNNFDGQIPKS-FGELKSLQSLDLSHNQLTGWIPPAIGDACGTLQNLRISYNNVTGVIPD 297

Query: 493 DILRLQQLRILDLSQNSLQS-IPEGF-KNLTSLTELDLSDNNISA-LPPEL 540
            +     L+ILDLS N++    P    ++  SL  L LS+N IS   PP +
Sbjct: 298 SLSSCSWLQILDLSNNNISGPFPNRILRSFGSLQILLLSNNFISGEFPPTI 348


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 145/270 (53%), Gaps = 9/270 (3%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S N+L+ LP  IG+L  L+ L +S+N +  +P+E G  T L       NQL  LP
Sbjct: 19  TELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLP 78

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL- 189
           + +G+   L       N ++ LPE++   + +  L +  N+L+ L     A +  L +L 
Sbjct: 79  AEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLP----AEFGQLRKLQ 134

Query: 190 --IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                +N L+ +PE IG L+ L  L L++N++ ++P  I    +L   ++  N LS+LP 
Sbjct: 135 CFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPP 194

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT-LRKLLL 305
           E+G+LS L  L L  NQL     E  QL  L  L L  N LS LPPEIG++ + L +L L
Sbjct: 195 EIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTL 254

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            GNPL +L + +    +  +L + + +L +
Sbjct: 255 DGNPLESLPAEIRGKISQVILNFYKQKLEQ 284



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 135/290 (46%), Gaps = 38/290 (13%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A     ++LD+ GN+LT L    I   T L  L  S N L+ +PE  G L+ L  L L +
Sbjct: 13  AAAEGWTELDLSGNELTALPPE-IGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLE 71

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           N++ ++P+ I     L   Y+  N LS LP E+G+L+ L +L L+ NQL     E  QLR
Sbjct: 72  NQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLR 131

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L    L  N LS LP EIG++T L+ L L  N L TL       P            PE
Sbjct: 132 KLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTL-------P------------PE 172

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                        I   + L      L L    LS++P EI +   +  L LS N +  L
Sbjct: 173 -------------IGQLSNLQY----LHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSL 215

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           P E+    +LQ+L L  N++   P  I    S L+ L LD NPL  +P++
Sbjct: 216 PEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAE 265



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 127/266 (47%), Gaps = 25/266 (9%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPEN 336
           LDLS N L+ LPPEIG++T L+ L L+ N L +L      L N     LL+   S LP  
Sbjct: 21  LDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAE 80

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                       I    +L      L L    LS +P EI +   +  L L+ N +  LP
Sbjct: 81  ------------IGQLRKLQC----LYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLP 124

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E      LQ   L RN++   P+ I   L++L  L L+ N L  +P +    +  LQ L
Sbjct: 125 AEFGQLRKLQCFYLRRNQLSSLPEEI-GQLTNLQSLYLNENQLSTLPPE-IGQLSNLQYL 182

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            LSYN ++SLP  P    L +LQ L+L   QL   P +I +L  L+ L L  N L S+P 
Sbjct: 183 HLSYNQLSSLP--PEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPP 240

Query: 516 GFKNLTS-LTELDLSDNNISALPPEL 540
               L S LTEL L  N + +LP E+
Sbjct: 241 EIGRLHSHLTELTLDGNPLESLPAEI 266



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 12/202 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +LQ L L  N +  L  +   L  L    +  N+LS LP  IG+L  L+SL ++ N + 
Sbjct: 108 TNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLS 167

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG  + L     S NQL  LP  +G+  NL     S N ++SLPE++   + +  
Sbjct: 168 TLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQS 227

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLI------RLD---- 213
           L +  N+L+ L   +    + LTEL    N L  +P  I G +S++I      +L+    
Sbjct: 228 LYLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAEIRGKISQVILNFYKQKLEQTIN 287

Query: 214 -LHQNRILSIPSSISGCCSLAE 234
            L++ ++L I    +G  SLA+
Sbjct: 288 RLYEAKLLIIGEGGAGKTSLAK 309



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L   +L   P +I +L  L+ L LS N L S+PE F  LT+L  L L +N +S LP 
Sbjct: 20  ELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPA 79

Query: 539 EL 540
           E+
Sbjct: 80  EI 81


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 190/404 (47%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + NN  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 68/417 (16%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM- 185
           K L  +L    ++ +   S   + +LP  +     + KLD+ GN+ T+LS  +   W + 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEI---WQLK 87

Query: 186 -LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L +L  + N L  +P+ IG L  L  L LH N ++++P  I    +L +  + NN L+ 
Sbjct: 88  DLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTV 147

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L SN+L     E  QL+ L  LDL+NN  + +  E+  + TL  L
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENL 207

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+T+         P  ++ L+S                            K L 
Sbjct: 208 DLRSNKLKTI---------PKEIRQLKSL---------------------------KVLM 231

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L G  L+++P EI +   +  L+L  N  Q  P E+    +L  L L  N++ ++P  + 
Sbjct: 232 LTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEV- 290

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
             L SL  L L +N +  +P +                          + LP LQEL+L 
Sbjct: 291 GQLKSLKYLSLYHNQITTLPVE-------------------------VTQLPDLQELHLS 325

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             ++   P +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 326 GNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL++N  + +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|296209726|ref|XP_002751658.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Callithrix jacchus]
          Length = 860

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 242/542 (44%), Gaps = 50/542 (9%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE 89
           + F  A  GD     + L+ L L  N +  L  ++++L  L +LNVSHN +S +P  + +
Sbjct: 177 RTFQGADSGD----LLGLESLSLQENGLSSLPSEIQSLHNLRILNVSHNHISHIPKEMLQ 232

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG-----RCLNLS---- 140
           L  ++ L  + N I   P ++     L       N+L+ LP +L      R LNL     
Sbjct: 233 LGNIRQLFFNNNYIENFPSDLECLGNLEILSLGKNKLRHLPDTLPSLKNLRILNLEYNQL 292

Query: 141 --------------DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
                             + N I+SLP+++ +   +  L ++ NKLT L+   I     +
Sbjct: 293 TIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVE-IFHLLKI 351

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL  + N L  +   I +   L  L L +N + +IP  IS C  L    + +N L+ LP
Sbjct: 352 KELQLADNKLEVISHKIENFRELRILILDKNVLKNIPEKISYCVMLECLSLSDNKLTELP 411

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             + KL  L  L ++ N + +       L  +  L+ S N ++G+P EI     + K+ L
Sbjct: 412 KNIHKLKNLRKLHVNRNNMVKITDNISHLNNICSLEFSGNIITGVPIEIKNCQKITKVEL 471

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +      L    +   L YL            S     +  +   +S + + L LE
Sbjct: 472 NYNKIMYFPVGLCALDS---LNYL------------SVNGNYISEIPVDISFSKQLLHLE 516

Query: 366 -GMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
              N   I SE +     +  LDL +N I+++P  +S+  SL  LIL  NK + +P  + 
Sbjct: 517 LSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELC 576

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-ENPPFSSLPHLQELY 481
           T L +L  L L  N L+++ SD  K +  +Q L+ S N     P E     SL  L    
Sbjct: 577 T-LENLRVLDLSENQLQKISSDICK-LKGIQKLNFSSNQFIYFPIELCQLQSLEQLNISQ 634

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           ++  +L   P ++  + QL+ LD+S N+++ IP     L +L  L   +N IS LPP L+
Sbjct: 635 IKGKKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSLL 694

Query: 542 SV 543
           S+
Sbjct: 695 SL 696



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 248/556 (44%), Gaps = 61/556 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+              +  ++++L   +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEM-------------LQLGNIRQLFFNNNYIENFPSDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  LP  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
               NL      +N +T L  ++    K+ +L +  NKL V+S+ +              
Sbjct: 323 RELKNLETLLLDHNKLTFLAVEIFHLLKIKELQLADNKLEVISHKIENFRELRILILDKN 382

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I+   ML  L  S N L  +P+ I  L  L +L +++N ++ I  +IS   +
Sbjct: 383 VLKNIPEKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDNISHLNN 442

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           +       N ++ +P E+    K+  ++L+ N++  + V  C L  L+ L ++ N +S +
Sbjct: 443 ICSLEFSGNIITGVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLNYLSVNGNYISEI 502

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           P +I     L  L L+ N L        SL+N      LKYL   L +N+  +   +  +
Sbjct: 503 PVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASISN 554

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           +I++   +   +K            P E+     +  LDLS N +Q++  ++     +Q 
Sbjct: 555 MISLHVLILCCNK--------FETFPRELCTLENLRVLDLSENQLQKISSDICKLKGIQK 606

Query: 408 LILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
           L  S N+   +P  +  L SL  L+  ++    L  +P +   ++  L+ LD+S N I  
Sbjct: 607 LNFSSNQFIYFPIELCQLQSLEQLNISQIKGKKLTILPGE-LSNMTQLKELDISNNAIRE 665

Query: 465 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 524
           +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL 
Sbjct: 666 IPRN--IGELRNLVSLHAHNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSDIYNLFSLK 723

Query: 525 ELDLSDNNISALPPEL 540
           E++  DN +   P E+
Sbjct: 724 EINFEDNPLLRPPMEI 739



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 184/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L  L+ L V+ N+++K
Sbjct: 373 ELRILILDKNVLKNIPEKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVK 432

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  ++  + + N I   P  L     ++ L
Sbjct: 433 ITDNISHLNNICSLEFSGNIITGVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLNYL 492

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 493 SVNGNYISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 551

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 552 ISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICKLKGIQKLNFSS 611

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 612 NQFIYFPIELCQLQSLEQLNISQIKGKKLTILPGELSNMTQLKELDISNNAIREI----- 666

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS+I+
Sbjct: 667 ----PRNIGELRNLVSLHAHNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSDIY 717

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 718 NLFSLKEINFEDNPL--LRPPMEICKGKQLYTIAR 750



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 179/417 (42%), Gaps = 42/417 (10%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +   P+D      +  L ++ N++             L  L   +N L+ +P  I SL  
Sbjct: 153 LQEFPKDTLKIKYVKYLYLDKNQIRTFQGADSGDLLGLESLSLQENGLSSLPSEIQSLHN 212

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-----------LGK------ 251
           L  L++  N I  IP  +    ++ + +  NN +   P++           LGK      
Sbjct: 213 LRILNVSHNHISHIPKEMLQLGNIRQLFFNNNYIENFPSDLECLGNLEILSLGKNKLRHL 272

Query: 252 ------LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                 L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LL
Sbjct: 273 PDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLL 332

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L   + +     LLK    +L +N+    S   E+   +  R+ +  K +  
Sbjct: 333 LDHNKLTFLAVEIFH-----LLKIKELQLADNKLEVISHKIENFREL--RILILDKNV-- 383

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
               L  IP +I     +  L LS N + ELP  +    +L+ L ++RN +    D I +
Sbjct: 384 ----LKNIPEKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDNI-S 438

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L+++  L+   N +  VP +  K+   +  ++L+YN I   P      +L  L  L + 
Sbjct: 439 HLNNICSLEFSGNIITGVPIE-IKNCQKITKVELNYNKIMYFP--VGLCALDSLNYLSVN 495

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              + E P DI   +QL  L+LS+N L    E F +L +L  LDL  N I  +P  +
Sbjct: 496 GNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASI 552



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 8/226 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
            + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD
Sbjct: 526 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLD 585

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSL 152
           +S N + KI  +I     + K + SSNQ    P  L +      LN+S  K     +T L
Sbjct: 586 LSENQLQKISSDICKLKGIQKLNFSSNQFIYFPIELCQLQSLEQLNISQIKGKK--LTIL 643

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L
Sbjct: 644 PGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAHNNQISYLPPSLLSLNDLQQL 702

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +L  N + ++PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 703 NLSGNNLTALPSDIYNLFSLKEINFEDNPLLRPPMEICKGKQLYTI 748



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 37/203 (18%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           K+LSLE  N +              + L    +QE P +      ++ L L +N+I+ + 
Sbjct: 135 KQLSLEADNFT--------------VTLEAKGLQEFPKDTLKIKYVKYLYLDKNQIRTFQ 180

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP------------ 466
            A    L  L  L L  N L  +PS+  + +  L+IL++S+N I+ +P            
Sbjct: 181 GADSGDLLGLESLSLQENGLSSLPSE-IQSLHNLRILNVSHNHISHIPKEMLQLGNIRQL 239

Query: 467 -------ENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 517
                  EN P     L +L+ L L + +LR  P  +  L+ LRIL+L  N L   P+  
Sbjct: 240 FFNNNYIENFPSDLECLGNLEILSLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKAL 299

Query: 518 KNLTSLTELDLSDNNISALPPEL 540
             L  L  LDL+ N IS+LP E+
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEI 322


>gi|238908508|ref|NP_001155000.1| leucine-rich repeat and death domain-containing protein 1 [Homo
           sapiens]
 gi|171855256|sp|A4D1F6.2|LRRD1_HUMAN RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
          Length = 860

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 250/557 (44%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+     + G         ++++L   +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEI----SQLG---------NIRQLFFYNNYIENFPSDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  +P  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      +N +T L  ++    K+ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 323 RELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHK-IENFRELRILILDK 381

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           NLL  +PE I                         L+ L +L +++N ++ I   IS   
Sbjct: 382 NLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLN 441

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++ +P E+    K+  ++L  N++  + +  C L  L  L ++ N +S 
Sbjct: 442 NICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISE 501

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L+ N L        SL+N      LKYL   L +N+  +   +  
Sbjct: 502 IPVDISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASIS 553

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++   +   +K            P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 554 NMISLHVLILCCNK--------FETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ 605

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L  S N+   +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I 
Sbjct: 606 KLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIR 664

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    N+ SL
Sbjct: 665 EIPRN--IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSL 722

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 723 KEINFDDNPLLRPPVEI 739



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 253/571 (44%), Gaps = 59/571 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N +  L 
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-----------------------LDV 98
            +++ L  L +LNVSHN +S +P  I +L  ++                        L +
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  IPD + S   L   +   NQL   P +L     L     + N I+SLP+++ +
Sbjct: 265 GKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRE 324

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N 
Sbjct: 325 LKNLETLLMDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNL 383

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLR 276
           + +IP  IS C  L    + +N L+ LP  + KL+ L  L ++ N + +   C+      
Sbjct: 384 LKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLN-N 442

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           +  L+ S N ++ +P EI     + K+ L+ N +      L    +   L YL       
Sbjct: 443 ICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYL------- 492

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSRNSIQE 394
                S     +  +   +S + + L LE   N   I SE +     +  LDL +N I++
Sbjct: 493 -----SVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKK 547

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q
Sbjct: 548 IPASISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQ 605

Query: 455 ILDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
            L+ S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ 
Sbjct: 606 KLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIRE 665

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           IP     L +L  L   +N IS LPP L+S+
Sbjct: 666 IPRNIGELRNLVSLHAYNNQISYLPPSLLSL 696


>gi|124002081|ref|ZP_01686935.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992547|gb|EAY31892.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 529

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 231/497 (46%), Gaps = 68/497 (13%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  +++  L  ++  L  L  LN+ +NKL+ +P  + +L  L++L +  N I  
Sbjct: 64  NLRYLSLWKDDLTALPPEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQITS 123

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +   IG    L + +  SN+L++LP  LG   +L      +N +   PE +     + +L
Sbjct: 124 LSPAIGQLKHLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEGIGKLLNLQQL 183

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++E N+L VL    + + T L +L    N L  +P+ IG L +L  L++ +N++  +P+S
Sbjct: 184 NLEHNRLAVLPKT-VGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTS 242

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L +  + +N LS LPAEL  L  L  L+L  NQL +      QL+ L  L+L N
Sbjct: 243 IGQLQQLEQLDLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWN 302

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP  IG++  L++L +  N L                    + LPE         
Sbjct: 303 NLLTALPTTIGQLQNLQRLNIADNRL--------------------TALPEQ-------- 334

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I M T+L     EL LE   ++ +P  I +   + ++ L  N I +LP E+ +   
Sbjct: 335 ----IGMLTKLI----ELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGNLYC 386

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            Q L LS N++   P     S+  L CL                       L+LSYN ++
Sbjct: 387 RQ-LDLSSNRLTTLP----LSIGGLQCLS----------------------LNLSYNALS 419

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LP          L  L L   QL   P+ I  ++ L+ LDLS N+L  +P    NL SL
Sbjct: 420 YLPLT--IGQWTDLMMLNLSSNQLSYLPSTIGEMENLQDLDLSDNALSYLPATMGNLKSL 477

Query: 524 TELDLSDNNISALPPEL 540
            +L+LS N ++A   +L
Sbjct: 478 RKLNLSGNQLTAFAFDL 494



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 159/301 (52%), Gaps = 31/301 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L+KL L +N ++ L + +  L  L VL +S N+L+ LP +IG+L  L+ LD+S N + 
Sbjct: 201 TQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTSIGQLQQLEQLDLSSNQLS 260

Query: 105 KIPDEIGSATALVKFDCSSNQLKEL-----------------------PSSLGRCLNLSD 141
           ++P E+     L + +   NQL +L                       P+++G+  NL  
Sbjct: 261 QLPAELKGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQR 320

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
              ++N +T+LPE +   +K+ +L +E N++T L  + I   + + E+    NL+  +P 
Sbjct: 321 LNIADNRLTALPEQIGMLTKLIELKLENNEITRLPPS-IGQLSHVAEIRLEHNLITDLPT 379

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISG--CCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
            IG+L    +LDL  NR+ ++P SI G  C SL   Y   NALS LP  +G+ + L  L+
Sbjct: 380 EIGNL-YCRQLDLSSNRLTTLPLSIGGLQCLSLNLSY---NALSYLPLTIGQWTDLMMLN 435

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L SNQL        ++  L  LDLS+N+LS LP  +G + +LRKL L+GN L      L 
Sbjct: 436 LSSNQLSYLPSTIGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFDLQ 495

Query: 319 N 319
           N
Sbjct: 496 N 496



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 170/370 (45%), Gaps = 38/370 (10%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           HN +  L + + NL  L  L + +N+L  LP AIG+L  L+ L++S N +  +P  IG  
Sbjct: 187 HNRLAVLPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTSIGQL 246

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L + D SSNQL +LP+ L    NL       N +  LP  +    ++  L++  N LT
Sbjct: 247 QQLEQLDLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLT 306

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + N L  +PE IG L++LI L L  N I  +P SI     +A
Sbjct: 307 ALPTT-IGQLQNLQRLNIADNRLTALPEQIGMLTKLIELKLENNEITRLPPSIGQLSHVA 365

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  + +N ++ LP E+G L     LDL SN+L    +    L+   L+LS N+LS LP  
Sbjct: 366 EIRLEHNLITDLPTEIGNLY-CRQLDLSSNRLTTLPLSIGGLQCLSLNLSYNALSYLPLT 424

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG+ T L  L L+ N                 L YL S + E E+ +             
Sbjct: 425 IGQWTDLMMLNLSSNQ----------------LSYLPSTIGEMENLQ------------- 455

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
                  +L L    LS +P+ +     + KL+LS N +     +L + + L+ L+L  N
Sbjct: 456 -------DLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFDLQNLSHLKELVLLGN 508

Query: 414 KIKDWPDAIL 423
            I     AI+
Sbjct: 509 PISTETKAIV 518



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 28/164 (17%)

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E +   +L+ L L ++ +   P  +L  LS+L  L L  N L  +P +    +  LQ L 
Sbjct: 58  EFNFVQNLRYLSLWKDDLTALPPEVL-QLSNLRQLNLGYNKLTTIPPE-LNQLKYLQALS 115

Query: 458 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 516
           L +N I SL  +P    L HLQEL L   +LR+ P ++  L+ L++LDL  N L+  PEG
Sbjct: 116 LVHNQITSL--SPAIGQLKHLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEG 173

Query: 517 F-----------------------KNLTSLTELDLSDNNISALP 537
                                    NLT L +L+L +N + ALP
Sbjct: 174 IGKLLNLQQLNLEHNRLAVLPKTVGNLTQLEKLELGNNELKALP 217


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 186/427 (43%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L                      LP    S  + T     
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL--------------------PELPREIGSCKNVTV---- 354

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                       +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 355 ------------MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 197/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I  C ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPET-VGDCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 189/438 (43%), Gaps = 72/438 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   +++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVETIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L  LP S     NL+    ++  + SLPE++ +   ++ L++                  
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELR----------------- 159

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                  +NLL  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS L
Sbjct: 160 -------ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSEL 212

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P E+G L  L  LD                      +S N L  LP EI  +T+L  L++
Sbjct: 213 PQEIGNLQNLLCLD----------------------VSENKLERLPEEISGLTSLTDLVI 250

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           + N L T+   +      ++LK  ++RL     ++   T  D  ++         EL L 
Sbjct: 251 SQNLLETIPDGIGKLKKLSILKVDQNRL-----TQLPETVGDCESLT--------ELVLT 297

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L A+P  I +  +++ L+  RN +  LP E+  C SL    +  N++   P A ++ 
Sbjct: 298 ENRLPALPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP-AEVSQ 356

Query: 426 LSSLSCLKLDNNPLRQVP 443
            + L  L +  N L  +P
Sbjct: 357 ATELHVLDVAGNRLLHLP 374



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-ETVGDCESLTELVLTENRLPALPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 195/416 (46%), Gaps = 51/416 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS + L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL+ N  + +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 155/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     SNN +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D S+NQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 150/311 (48%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++S+N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L++N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 154/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDLSNN L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L+ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDLS N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLSNNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|390177720|ref|XP_003736468.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
 gi|388859165|gb|EIM52541.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
          Length = 616

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 232/530 (43%), Gaps = 67/530 (12%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL-----------------------NV 75
           D WW  V L  L L+ N +  +   + NL  LTVL                       NV
Sbjct: 81  DAWWNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNV 140

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S NKLS+LP  +  L  L+ L++S+N   ++  +I     L   D   N +K LP  +G 
Sbjct: 141 SRNKLSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGF 200

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            + L+      N I  LP DL +   + +LD+  N LT L                    
Sbjct: 201 LVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCL-------------------- 240

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSK 254
               PE +G L +L  L +  N I+ + S   G  +L E +  NN +S +P  + + L  
Sbjct: 241 ----PEDMGLLRKLQFLYIQHNDIMEL-SDFEGNETLTELHASNNYISNIPISMCENLPH 295

Query: 255 LGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  N++ +   E      L+ LD+SNNS+  LP  +  +  L  L + GNP++++
Sbjct: 296 LKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSI 355

Query: 314 RSSLVNGPTPALLKYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           R  ++   T  +L+ L+ R + +++D   S +         RL          G + +A 
Sbjct: 356 RRDILQCGTSRILRTLQERSMVKSKDEVESDSG-----AGARLCGGQA-----GNDTAAN 405

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSLSSL 429
             + ++      L ++   I ++P E+   A    +  +  +RN+++  PD +    + +
Sbjct: 406 YPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIV 465

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
           + L L +N + QVP    +   +  +   +  +  LP+   F  L  L+EL +   +   
Sbjct: 466 TELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPKE--FGVLNTLRELNIANNRFSF 523

Query: 490 APTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPP 538
            P+ +  LQ L IL  S N +  +   G + +  L+ LDL +N+I  +PP
Sbjct: 524 LPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPP 573



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 217/489 (44%), Gaps = 38/489 (7%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N +  L  +L +LP L  LN+S+N+ SEL   I +LHML+ LD   NSI  +
Sbjct: 135 LMRLNVSRNKLSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSL 194

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L       N +K+LP  L    +L       N +T LPED+    K+  L 
Sbjct: 195 PGGIGFLVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLY 254

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSS 225
           ++ N +  LS+        LTEL AS N ++ +P ++  +L  L  LDL  N+I  +P  
Sbjct: 255 IQHNDIMELSD--FEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDNKITQLPDE 312

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL--DLS 283
           +    +L    + NN++  LP  L  L+ L +L +  N +K    +  Q   S +   L 
Sbjct: 313 LCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQ 372

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
             S+     E+   +     L  G   +    +  N P    L++ R+     E  E + 
Sbjct: 373 ERSMVKSKDEVESDSGAGARLCGG---QAGNDTAANYPDRYKLRHTRTLAVNLE--EITD 427

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSC 402
             E++  +A +  V   + +     L  +P  +     I T+L L+ N I ++P  +S  
Sbjct: 428 VPEEVFQLAQKEGVHVVDFARN--QLRTVPDGLQHMQNIVTELVLAHNRIGQVPQFISQF 485

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
             +  L LS N + D P      L++L  L + NN    +PS G  D+  L+IL  S N 
Sbjct: 486 TRITLLNLSNNLLTDLPKE-FGVLNTLRELNIANNRFSFLPS-GLYDLQGLEILIASDN- 542

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 522
                        H+ EL +  +Q         R+ +L  LDL  N +  IP     LT+
Sbjct: 543 -------------HINELNVAGLQ---------RMPRLSTLDLRNNDIDFIPPILGTLTN 580

Query: 523 LTELDLSDN 531
           +T L+L  N
Sbjct: 581 ITHLELVGN 589



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 55/324 (16%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L VL++  NK+++LP  +  L  L  LDVS NSI  +P  + +   L+      N 
Sbjct: 292 NLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNP 351

Query: 126 LK----------------------------ELPSSLGRCLNLSDFKASNNC--------- 148
           +K                            E+ S  G    L   +A N+          
Sbjct: 352 IKSIRRDILQCGTSRILRTLQERSMVKSKDEVESDSGAGARLCGGQAGNDTAANYPDRYK 411

Query: 149 -------------ITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                        IT +PE+   LA    +  +D   N+L  + + L     ++TEL+ +
Sbjct: 412 LRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLA 471

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ I   +R+  L+L  N +  +P       +L E  + NN  S LP+ L  L
Sbjct: 472 HNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTLRELNIANNRFSFLPSGLYDL 531

Query: 253 SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L    N + E  V   Q   RLS LDL NN +  +PP +G +T +  L L GNP 
Sbjct: 532 QGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGNPF 591

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R  R  ++   T +++ YLR R+P
Sbjct: 592 RQPRHQILMKGTESIMSYLRDRVP 615



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 205/485 (42%), Gaps = 86/485 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S   L D+P E+Y                +L+ L +++N   +L  D+ +L +L  L
Sbjct: 138 LNVSRNKLSDLPRELYS-------------LPELRHLNISYNEFSELNPDISDLHMLEFL 184

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  HN +  LP  IG L  L +L + +N I  +P ++ +  +L + D   N L  LP  +
Sbjct: 185 DAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDM 244

Query: 134 G-------------RCLNLSDFK---------ASNNCITSLPEDLAD-CSKMSKLDVEGN 170
           G               + LSDF+         ASNN I+++P  + +    +  LD+  N
Sbjct: 245 GLLRKLQFLYIQHNDIMELSDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDN 304

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           K+T L + L     +    + S N ++ +P ++ +L+ LI L +  N I SI   I  C 
Sbjct: 305 KITQLPDELCLLRNLNRLDV-SNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCG 363

Query: 231 S------LAEFYM----------------------GNNALSALPAELGKLSKLGTLDLHS 262
           +      L E  M                      GN+  +  P    KL    TL ++ 
Sbjct: 364 TSRILRTLQERSMVKSKDEVESDSGAGARLCGGQAGNDTAANYPDRY-KLRHTRTLAVNL 422

Query: 263 NQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTL-RKLLLTGNPLRTLRSSL 317
            ++ +   E  QL     + V+D + N L  +P  +  M  +  +L+L  N +       
Sbjct: 423 EEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLAHNRI------- 475

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G  P  +    +R+     S    T  DL      L+ T +EL++     S +PS ++
Sbjct: 476 --GQVPQFISQF-TRITLLNLSNNLLT--DLPKEFGVLN-TLRELNIANNRFSFLPSGLY 529

Query: 378 EAGEITKLDLSRNSIQEL-PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           +   +  L  S N I EL    L     L TL L  N I D+   IL +L++++ L+L  
Sbjct: 530 DLQGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDI-DFIPPILGTLTNITHLELVG 588

Query: 437 NPLRQ 441
           NP RQ
Sbjct: 589 NPFRQ 593



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 26/167 (15%)

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
           W    +T LDLS N++  + P++ +  SL  LIL  N +   P A +  L  L  L +  
Sbjct: 84  WNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALP-AEIGKLEKLMRLNVSR 142

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           N L  +P + +  +P L+ L++SYN                        +  E   DI  
Sbjct: 143 NKLSDLPRELYS-LPELRHLNISYN------------------------EFSELNPDISD 177

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L  LD   NS++S+P G   L  LT L L  N+I  LPP+LV++
Sbjct: 178 LHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLVNM 224


>gi|332026947|gb|EGI67044.1| Protein LAP2 [Acromyrmex echinatior]
          Length = 1016

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 203/435 (46%), Gaps = 57/435 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++ +L DVP +V+            +E   L+KL L  N I  L   L     L VL
Sbjct: 22  LQLNHCNLYDVPPDVF-----------IYERT-LEKLYLDANRIRDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I    +L   D S N  +  P ++
Sbjct: 70  SLSDNEIATLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N +  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSM-SRLVNLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  +P+++     L  F    NA+ ALP E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +G ++L SN++ E     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DIGIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEY 308

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L SS+       LL+ L                                L+ +   L A+
Sbjct: 309 LPSSI------GLLRKLHC------------------------------LNADNNYLRAL 332

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P+EI     ++ L L  N++  +PPEL   +SL+ L L  N IK  P ++L +LS+L  L
Sbjct: 333 PAEIGSCTSLSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSML-NLSNLKAL 391

Query: 433 KLDNN------PLRQ 441
            L +N      PL+Q
Sbjct: 392 WLSDNQSQPLVPLQQ 406



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 163/394 (41%), Gaps = 85/394 (21%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP  L  C ++  L +  N++  L    IAS   L  L  SKN +  +P++I   
Sbjct: 51  NRIRDLPRPLFQCHELRVLSLSDNEIATLPP-AIASLINLEYLDLSKNSIKELPDSIKEC 109

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  +D+  N     P +I+    L E Y+ +  +  LPA  G+LS L T         
Sbjct: 110 KSLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALRT--------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                        L+L  N++  LP  + ++  L++L +  N                  
Sbjct: 161 -------------LELRENNMMTLPKSMSRLVNLQRLDIGNNDF---------------- 191

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               + LPE           DLI +         EL ++G ++  +P+ + +   +   D
Sbjct: 192 ----TELPE--------VVGDLINLT--------ELWIDGNDIRRVPANVEQLYRLNHFD 231

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
            + N+I  LP E+     +  + LS N++ + PD  L  L ++  LK+D+N L  +P+D 
Sbjct: 232 CTMNAIHALPMEIRGWRDIGIMNLSSNEMYELPDT-LCYLRTIVTLKIDDNQLNALPND- 289

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
                                      +  L+EL + +  L   P+ I  L++L  L+  
Sbjct: 290 ------------------------IGQMSSLEELIITKNFLEYLPSSIGLLRKLHCLNAD 325

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L+++P    + TSL+ L L  NN++ +PPEL
Sbjct: 326 NNYLRALPAEIGSCTSLSLLSLRSNNLTRVPPEL 359



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 5/181 (2%)

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           T ++L L+   +  +P  +++  E+  L LS N I  LPP ++S  +L+ L LS+N IK+
Sbjct: 42  TLEKLYLDANRIRDLPRPLFQCHELRVLSLSDNEIATLPPAIASLINLEYLDLSKNSIKE 101

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPH 476
            PD+I     SL  + +  NP  + P D    I  L+ L ++   I  LP N  F  L  
Sbjct: 102 LPDSI-KECKSLRSIDISVNPFERFP-DAITHIVGLRELYINDAYIEYLPAN--FGRLSA 157

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ L LR   +   P  + RL  L+ LD+  N    +PE   +L +LTEL +  N+I  +
Sbjct: 158 LRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRV 217

Query: 537 P 537
           P
Sbjct: 218 P 218



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 455 ILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
           + +L  N  +L + PP  F     L++LYL   ++R+ P  + +  +LR+L LS N + +
Sbjct: 19  VCELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIRDLPRPLFQCHELRVLSLSDNEIAT 78

Query: 513 IPEGFKNLTSLTELDLSDNNISALP 537
           +P    +L +L  LDLS N+I  LP
Sbjct: 79  LPPAIASLINLEYLDLSKNSIKELP 103



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 490
           L+L++  L  VP D F     L+ L L  N I  LP   P      L+ L L   ++   
Sbjct: 22  LQLNHCNLYDVPPDVFIYERTLEKLYLDANRIRDLPR--PLFQCHELRVLSLSDNEIATL 79

Query: 491 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P  I  L  L  LDLS+NS++ +P+  K   SL  +D+S N     P  +  +
Sbjct: 80  PPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAITHI 132


>gi|348553819|ref|XP_003462723.1| PREDICTED: protein LAP2-like isoform 3 [Cavia porcellus]
          Length = 1301

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 131/236 (55%), Gaps = 2/236 (0%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  LK+L++  N +  +P EIG  T+L +    +N L  +P+ +G+  +L   
Sbjct: 141 VPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVL 200

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +TSLP ++   + + +L + GN+LT L    I   T L +L  S+N L  +P  
Sbjct: 201 GLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAE-IGQLTALEKLHLSRNQLTRVPVE 259

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L  L L  N++ S+P+ +    SL    + NN L+++PAE+G+L  L  L LH+
Sbjct: 260 IGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHN 319

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           NQL     E  QL  L  L L NN L+ +P EIG++ +L +L L  N L  L ++L
Sbjct: 320 NQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAAL 375



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLK------EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           WE V ++   +    +E+         ++  L  L  L +  N+L+ +PA IG+L  L+ 
Sbjct: 117 WEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLER 176

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L +  N +  +P EIG  T+L       NQL  LP+ +GR  +L +   + N +TSL  +
Sbjct: 177 LRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAE 236

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +   + + KL +  N+LT +    I   T L EL    N L  +P  +G    L  L L+
Sbjct: 237 IGQLTALEKLHLSRNQLTRVPVE-IGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLY 295

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++ S+P+ I     L   Y+ NN L+++PAE+G+L+ L  L L++NQL     E  QL
Sbjct: 296 NNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIGQL 355

Query: 276 R-LSVLDLSNNSLSGLPPEIGKM 297
           R L  LDL+ N L+ LP  + K+
Sbjct: 356 RSLERLDLNRNQLTRLPAALCKL 378



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 1/230 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N +  +  ++  L  L  L + +N L+ +PA IG+L  LK L +  N +  +
Sbjct: 151 LKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSL 210

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +   + NQL  L + +G+   L     S N +T +P ++   + + +L 
Sbjct: 211 PAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELY 270

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT +    +     L  L    N L  +P  IG L  L  L LH N++ S+P+ I
Sbjct: 271 LQHNQLTSVPAE-VGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEI 329

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
               SL E ++ NN L+ +PAE+G+L  L  LDL+ NQL       C+LR
Sbjct: 330 GQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLR 379



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 18/289 (6%)

Query: 153 PEDLADCS----KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           PED    +    ++ KL++E   LT      +   + L  L   +N L  +P  IG L+ 
Sbjct: 114 PEDWEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTS 173

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL LH N + S+P+ I    SL    +G N L++LPAE+G+L+ L  L L+ NQL   
Sbjct: 174 LERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSL 233

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL  L  L LS N L+ +P EIG++T LR+L L  N L ++ + +    +  +L 
Sbjct: 234 LAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLS 293

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              ++L         T+    I     L V    L L    L+++P+EI +   + +L L
Sbjct: 294 LYNNQL---------TSVPAEIGQLGWLKV----LYLHNNQLTSVPAEIGQLTSLQELFL 340

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
             N +  +P E+    SL+ L L+RN++   P A+    ++   ++LDN
Sbjct: 341 YNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLRATCCIVRLDN 389



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 141/295 (47%), Gaps = 42/295 (14%)

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
            A+PAE+G+LS L TL+L  N+L     E  QL  L  L L NN L+ +P EIG++T+L+
Sbjct: 139 GAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLK 198

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L GN L +L         PA +  L S                            +E
Sbjct: 199 VLGLGGNQLTSL---------PAEIGRLTS---------------------------LQE 222

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           L L G  L+++ +EI +   + KL LSRN +  +P E+    +L+ L L  N++   P A
Sbjct: 223 LWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVP-A 281

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
            +    SL  L L NN L  VP++    +  L++L L  N + S+P       L  LQEL
Sbjct: 282 EVGQHRSLKVLSLYNNQLTSVPAE-IGQLGWLKVLYLHNNQLTSVPAE--IGQLTSLQEL 338

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +L   QL   P +I +L+ L  LDL++N L  +P     L +   +   DN ++ 
Sbjct: 339 FLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLRATCCIVRLDNRVTV 393



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 22/235 (9%)

Query: 324 ALLKYLRSRLPENE---DSEASTTKEDLITMAT--RLSVTS------------KELSLEG 366
           A+   L+ R PE+E   D E  T +   +      R  +T             K L L  
Sbjct: 99  AMCPALQERWPEDEQPEDWEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQ 158

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+++P+EI +   + +L L  N +  +P E+    SL+ L L  N++   P A +  L
Sbjct: 159 NRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLP-AEIGRL 217

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           +SL  L L+ N L  + ++    +  L+ L LS N +  +P       L  L+ELYL+  
Sbjct: 218 TSLQELWLNGNQLTSLLAE-IGQLTALEKLHLSRNQLTRVPVE--IGQLTALRELYLQHN 274

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           QL   P ++ + + L++L L  N L S+P     L  L  L L +N ++++P E+
Sbjct: 275 QLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEI 329


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 192/419 (45%), Gaps = 57/419 (13%)

Query: 5   LKAARTSGS--LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++ AR  G+  L+LS   L ++P  +                  LQ+L L+ N + +L E
Sbjct: 14  IEKARQEGAIELDLSKIELTEIPEAIAS-------------LTQLQQLDLSRNQVTQLPE 60

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            + +L  L  L++S+NKL++LP AI  L  L+ LD+S N + ++P+ I S   L + +  
Sbjct: 61  AIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLR 120

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL ELP ++     L     SNN +T LPE +A  +++   D+  N+LT L N+L  S
Sbjct: 121 NNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSL--S 178

Query: 183 WTMLTELI-ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             +  E+     NLL  +P  I  L  L  L ++ N +  IPS I     L    +G N 
Sbjct: 179 RLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGNQ 238

Query: 242 LSALPAELGKLSKLGTLDLHSN-----------------QLKEYCVEACQL--------- 275
           +S LP  L KL  L  + L ++                 Q++      C+L         
Sbjct: 239 ISELPKSLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQIRRIWANNCELHFLPDWLNE 298

Query: 276 --RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             +L  L L +N L+ LP  +G++  L  + L  NPL    ++     T A+L+YLR+R 
Sbjct: 299 FPQLEELYLGSNCLTDLPASLGQLPHLDDIQLDHNPLNPDLAAAYEQGTEAVLQYLRAR- 357

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                SEA  T    +  A  + +   E+    + L A+  + WE G  T   +   S+
Sbjct: 358 -----SEAQVT----LNEAKLILIGEGEVGKSCL-LGALRGDEWEDGRPTTHGIEIKSV 406



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 5/155 (3%)

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +LDLS+  + E+P  ++S   LQ L LSRN++   P+AI  SL+ L  L L NN L Q+P
Sbjct: 24  ELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAI-ASLTQLQTLDLSNNKLTQLP 82

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            +    +  LQ LDLS N +  LPE    +SL  LQEL LR  QL E P  I  L +L+ 
Sbjct: 83  -EAIASLARLQRLDLSNNQLTELPE--AIASLAQLQELNLRNNQLTELPEAIASLTRLQR 139

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           LDLS N L  +PE   +LT L   DLS N ++ LP
Sbjct: 140 LDLSNNQLTELPEAIASLTQLQSFDLSHNELTELP 174



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 25/330 (7%)

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  SK  L  +PE I SL++L +LDL +N++  +P +I+    L    + NN L+ LP 
Sbjct: 24  ELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPE 83

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            +  L++L  LDL +NQL E       L +L  L+L NN L+ LP  I  +T L++L L+
Sbjct: 84  AIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLS 143

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L  L  ++      A L  L+S  L  NE +E   +   L+ +         E+   
Sbjct: 144 NNQLTELPEAI------ASLTQLQSFDLSHNELTELPNSLSRLLYL---------EIFDC 188

Query: 366 GMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           G NL   +PS I E   + +L +  N ++ +P  +     L+ L +  N+I + P + L 
Sbjct: 189 GSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGNQISELPKS-LD 247

Query: 425 SLSSLSCLKLD----NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
            L SL  + L      NPL ++P    +   + +I   +  +  LP+    +  P L+EL
Sbjct: 248 KLQSLEFIILGADDGGNPLSKLPPCIQRIKQIRRIWANNCELHFLPDW--LNEFPQLEEL 305

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSL 510
           YL    L + P  + +L  L  + L  N L
Sbjct: 306 YLGSNCLTDLPASLGQLPHLDDIQLDHNPL 335



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 125/302 (41%), Gaps = 67/302 (22%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ +P  +  L++L  LDL  NQ+ +       L +L  LDLSNN L+ LP  I  +  L
Sbjct: 32  LTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARL 91

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           ++L L+ N L                    + LPE   S A                  +
Sbjct: 92  QRLDLSNNQL--------------------TELPEAIASLAQL----------------Q 115

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
           EL+L    L+ +P  I     + +LDLS N + ELP  ++S   LQ+  LS N++ + P+
Sbjct: 116 ELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPN 175

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 480
           + L+ L  L      +N LRQVPS                             L  L+EL
Sbjct: 176 S-LSRLLYLEIFDCGSNLLRQVPS-------------------------VIKELKGLKEL 209

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL----DLSDNNISAL 536
           Y+    L   P+ I  L  L IL +  N +  +P+    L SL  +    D   N +S L
Sbjct: 210 YIYANDLEVIPSWICDLHVLEILSIGGNQISELPKSLDKLQSLEFIILGADDGGNPLSKL 269

Query: 537 PP 538
           PP
Sbjct: 270 PP 271



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 456 LDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           LDLS   +  +PE    +SL  LQ+L L R Q+ + P  I  L QL+ LDLS N L  +P
Sbjct: 25  LDLSKIELTEIPE--AIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLP 82

Query: 515 EGFKNLTSLTELDLSDNNISALPPELVSV 543
           E   +L  L  LDLS+N ++ LP  + S+
Sbjct: 83  EAIASLARLQRLDLSNNQLTELPEAIASL 111



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L +++L E P  I  L QL+ LDLS+N +  +PE   +LT L  LDLS+N ++ LP 
Sbjct: 24  ELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPE 83

Query: 539 ELVSV 543
            + S+
Sbjct: 84  AIASL 88


>gi|75076353|sp|Q4R6F0.1|LRRD1_MACFA RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|67969956|dbj|BAE01325.1| unnamed protein product [Macaca fascicularis]
          Length = 863

 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 253/576 (43%), Gaps = 57/576 (9%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHN 55
             + + ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N
Sbjct: 142 TCKDNFTVNLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGADSGDLLGLEILSLQEN 201

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-------------------- 95
            +  L  +++ L  L +LNVSHN +S +P  I +L  ++                     
Sbjct: 202 GLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGN 261

Query: 96  ---LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
              L +  N +  IPD + S   L   +   NQL   P +L     L     + N I+SL
Sbjct: 262 LEILSLGKNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSL 321

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++ +   +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L
Sbjct: 322 PKEIRELKNLETLLLDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRIL 380

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N + +IP  I  C  L    + +N L+ LP  + KL+ L  L ++ N + +     
Sbjct: 381 ILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI 440

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L  +  L+ S N ++G+P EI     + K+ L  N +      L    +   L YL  
Sbjct: 441 SHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLCALDS---LYYL-- 495

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSR 389
                     S     +  +   +S + + L LE   N   I SE +     +  LDL +
Sbjct: 496 ----------SVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGK 545

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N I+++P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   +
Sbjct: 546 NQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSD-ICN 603

Query: 450 IPMLQILDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +  +Q L+ S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S 
Sbjct: 604 LKRIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISN 663

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N+++ IP     L +L  L   +N IS +PP L+S+
Sbjct: 664 NAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSL 699



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 185/427 (43%), Gaps = 57/427 (13%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++ + +++L LA N +E +   + N   L +L +  N L  +P  I    ML+ L +S N
Sbjct: 349 FQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKICCCAMLECLTLSDN 408

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  I     L K   + N + ++  S+    N+   + S N I  +P ++ +C K
Sbjct: 409 KLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQK 468

Query: 162 MSKLDVEGNK----------------LTVLSNNL------IASWTMLTELIASKNLLNGM 199
           + K+++  NK                L+V  N +      I+    L  L  S+N L   
Sbjct: 469 IIKIELNYNKIMYFPLGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIF 528

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
            E   SL  L  LDL +N+I  IP+SIS   SL    +  N     P EL  L  L  LD
Sbjct: 529 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLD 588

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L  NQL++   + C L R+  L+ S+N     P E+ ++ +L +L ++    R L     
Sbjct: 589 LSENQLQKISSDICNLKRIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKL----- 643

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                       +RLP              ++  T+L    KEL +    +  IP  I E
Sbjct: 644 ------------TRLPGE------------LSNMTQL----KELDISNNAIREIPRNIGE 675

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  L    N I  +PP L S   LQ L LS N +   P AI  +L SL  +  D+NP
Sbjct: 676 LRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIY-NLFSLKEINFDDNP 734

Query: 439 LRQVPSD 445
           L + P +
Sbjct: 735 LLRPPME 741



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L +S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 376 ELRILILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVK 435

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  +   + + N I   P  L     +  L
Sbjct: 436 ITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYL 495

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 496 SVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 554

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 555 ISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKRIQKLNFSS 614

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 615 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 669

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 670 ----PRNIGELRNLVSLHAYNNQISYIPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 720

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 721 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 753



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 8/226 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
            + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD
Sbjct: 529 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLD 588

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSL 152
           +S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T L
Sbjct: 589 LSENQLQKISSDICNLKRIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRL 646

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L
Sbjct: 647 PGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYIPPSLLSLNDLQQL 705

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 706 NLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751


>gi|241623176|ref|XP_002407534.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215501009|gb|EEC10503.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 1327

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + KL      L  LTVL ++   L++LP   G L  L SL++  N +  +
Sbjct: 14  LQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLMSLELRENYLKGL 73

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P        L + D  SN  +ELP  +G+  +L +    +N +++LP+++    ++  LD
Sbjct: 74  PLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLD 133

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL+ L + L      LT+L  S+N L  +PE +G L +L    + QNR+ S+P+SI
Sbjct: 134 VSENKLSSLPDEL-CDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASI 192

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
             C SL E  + +N L+ LP  +G+L  L  L+   NQL E   +  QL RL VL L  N
Sbjct: 193 GDCESLQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLREN 252

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LPPE G +  L  L ++GN L+ L
Sbjct: 253 CLQKLPPETGTLRRLHVLDVSGNRLQHL 280



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N+ E+L   +  L  L  L +  N+LS LP  IG+L  L  LDVS N + 
Sbjct: 81  VKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 140

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDE+    +L     S N L+ LP  +GR   L+ FK   N + SLP  + DC     
Sbjct: 141 SLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASIGDCES--- 197

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                L ELI + NLL  +PE++G L  L  L+   N++  +P 
Sbjct: 198 ---------------------LQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPP 236

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    +  N L  LP E G L +L  LD+  N+L+   +    L L  L L+ 
Sbjct: 237 QIGQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRLQHLPLTVTALNLKALWLAK 296

Query: 285 N 285
           N
Sbjct: 297 N 297



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 143/295 (48%), Gaps = 19/295 (6%)

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P  +  L  L + D  SN L +      QLR L+VL L++ SL+ LP + G ++ L  L
Sbjct: 4   IPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLMSL 63

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+ L  S        L+K  R  L  N+        E+L  +  +LS + +EL 
Sbjct: 64  ELRENYLKGLPLSFA-----FLVKLERLDLGSND-------FEELPVVIGQLS-SLQELW 110

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L+   LS +P EI +   +  LD+S N +  LP EL    SL  L LS+N ++  P+  +
Sbjct: 111 LDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEE-M 169

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYL 482
             L  L+  K+D N L  +P+    D   LQ L L+ N+   LPE+     L +L  L  
Sbjct: 170 GRLRKLTIFKVDQNRLGSLPAS-IGDCESLQELILTDNLLTELPES--VGQLVNLTNLNA 226

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
              QL E P  I +L +L +L L +N LQ +P     L  L  LD+S N +  LP
Sbjct: 227 DCNQLSELPPQIGQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRLQHLP 281



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 48/321 (14%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PE I  L  L   D   N +  +P+      SL    + + +L+ LP + G LS L +L
Sbjct: 4   IPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLMSL 63

Query: 259 DLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +L  N LK   +  A  ++L  LDL +N    LP  IG++++L++L L  N L TL    
Sbjct: 64  ELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTL---- 119

Query: 318 VNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                P  +  LR      + EN+ S       DL ++         +L L    L  +P
Sbjct: 120 -----PKEIGQLRRLMCLDVSENKLSSLPDELCDLESLT--------DLHLSQNYLEVLP 166

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            E+    ++T   + +N +  LP  +  C SLQ LIL+ N + + P+++   L +L+ L 
Sbjct: 167 EEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTDNLLTELPESV-GQLVNLTNLN 225

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
            D N L ++P                         P    L  L  L LR   L++ P +
Sbjct: 226 ADCNQLSELP-------------------------PQIGQLARLGVLSLRENCLQKLPPE 260

Query: 494 ILRLQQLRILDLSQNSLQSIP 514
              L++L +LD+S N LQ +P
Sbjct: 261 TGTLRRLHVLDVSGNRLQHLP 281



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 24/171 (14%)

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +QE+P  +    SLQ+   S N +   P A    L SL+ L L++  L Q+P D F  + 
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLP-AGFVQLRSLTVLGLNDVSLTQLPHD-FGGLS 58

Query: 452 MLQILDLSYN-IASLPENPPF---------------------SSLPHLQELYLRRMQLRE 489
            L  L+L  N +  LP +  F                       L  LQEL+L   +L  
Sbjct: 59  NLMSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELST 118

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L++L  LD+S+N L S+P+   +L SLT+L LS N +  LP E+
Sbjct: 119 LPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEM 169


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|293332981|ref|NP_001168291.1| uncharacterized protein LOC100382055 [Zea mays]
 gi|223947257|gb|ACN27712.1| unknown [Zea mays]
          Length = 983

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 255/519 (49%), Gaps = 38/519 (7%)

Query: 38  GDKWWEAVDLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKS 95
           G    E+  ++ L+L+ NN   ++ E L     LT L +++N LS  +PAA+GEL  L  
Sbjct: 63  GGDEAESSSIEHLMLSMNNFTGEIPEGLSRCRALTQLGLANNSLSGVIPAALGELGNLTD 122

Query: 96  LDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-L 152
           L ++ NS+  ++P E+ + T L       N+L   LP ++GR +NL +     N  T  +
Sbjct: 123 LVLNNNSLSGELPPELFNLTELQTLALYHNKLSGRLPDAIGRLVNLEELYLYENQFTGEI 182

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGM--PETIGSLS 207
           PE + DC+ +  +D  GN+    + ++ AS   L++LI     +N L+G+  PE +G   
Sbjct: 183 PESIGDCASLQMIDFFGNRF---NGSIPASMGNLSQLIFLDFRQNELSGVIAPE-LGECQ 238

Query: 208 RLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQL 265
           +L  LDL  N +  SIP +     SL +F + NN+LS A+P  + +   +  +++  N+L
Sbjct: 239 QLKILDLADNALSGSIPETFGKLRSLEQFMLYNNSLSGAIPDGMFECRNITRVNIAHNRL 298

Query: 266 KEYCVEAC-QLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
               +  C   RL   D +NNS  G +P + G+ + L+++ L  N        +++GP P
Sbjct: 299 SGSLLPLCGTARLLSFDATNNSFDGAIPAQFGRSSGLQRVRLGSN--------MLSGPIP 350

Query: 324 ALLKYLRSRLPENEDSEASTTK-EDLITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGE 381
             L  + +    +  S A T      +   T LS V      L G    AIP  +    +
Sbjct: 351 PSLGGITALTLLDVSSNALTGGFPATLAQCTNLSLVVLSHNRLSG----AIPDWLGSLPQ 406

Query: 382 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           + +L LS N     +P +LS+C++L  L L  N+I       L SL+SL+ L L +N L 
Sbjct: 407 LGELTLSNNEFTGAIPVQLSNCSNLLKLSLDNNQINGTVPPELGSLASLNVLNLAHNQLS 466

Query: 441 -QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY-LRRMQLR-EAPTDILRL 497
            Q+P+   K +  L  L+LS N  S P  P  S L  LQ L  L         P  +  L
Sbjct: 467 GQIPTTVAK-LSSLYELNLSQNYLSGPIPPDISKLQELQSLLDLSSNNFSGHIPASLGSL 525

Query: 498 QQLRILDLSQNSL-QSIPEGFKNLTSLTELDLSDNNISA 535
            +L  L+LS N+L  ++P     ++SL +LDLS N +  
Sbjct: 526 SKLEDLNLSHNALVGAVPSQLAGMSSLVQLDLSSNQLEG 564



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 146/327 (44%), Gaps = 71/327 (21%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG-LPPEIG 295
           M N     +P  L  LS++ T+                      DLS N LSG LP E+G
Sbjct: 1   MNNRLTGRVPRTLAALSRVHTI----------------------DLSGNMLSGALPAELG 38

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--- 352
           ++  L  L+L+ N L         G  P         L   +++E+S+ +  +++M    
Sbjct: 39  RLPQLTFLVLSDNQL--------TGSVPG-------DLCGGDEAESSSIEHLMLSMNNFT 83

Query: 353 -------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPE 398
                        T+L + +  LS        IP+ + E G +T L L+ NS+  ELPPE
Sbjct: 84  GEIPEGLSRCRALTQLGLANNSLS------GVIPAALGELGNLTDLVLNNNSLSGELPPE 137

Query: 399 LSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           L +   LQTL L  NK+    PDAI   L +L  L L  N       +   D   LQ++D
Sbjct: 138 LFNLTELQTLALYHNKLSGRLPDAI-GRLVNLEELYLYENQFTGEIPESIGDCASLQMID 196

Query: 458 LSYNI--ASLPENPPFSSLPHLQELYLRRMQLRE--APTDILRLQQLRILDLSQNSLQ-S 512
              N    S+P +    +L  L  L  R+ +L    AP ++   QQL+ILDL+ N+L  S
Sbjct: 197 FFGNRFNGSIPAS--MGNLSQLIFLDFRQNELSGVIAP-ELGECQQLKILDLADNALSGS 253

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPE 539
           IPE F  L SL +  L +N++S   P+
Sbjct: 254 IPETFGKLRSLEQFMLYNNSLSGAIPD 280



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 196/497 (39%), Gaps = 120/497 (24%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLS-ELPAAI-----GELHMLKSLDVSFNSIM-KIPDEIGS 112
           L  +L  LP LT L +S N+L+  +P  +      E   ++ L +S N+   +IP+ +  
Sbjct: 33  LPAELGRLPQLTFLVLSDNQLTGSVPGDLCGGDEAESSSIEHLMLSMNNFTGEIPEGLSR 92

Query: 113 ATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKMSKLDVEGN 170
             AL +   ++N L   +P++LG   NL+D   +NN ++  LP +L + +++  L +  N
Sbjct: 93  CRALTQLGLANNSLSGVIPAALGELGNLTDLVLNNNSLSGELPPELFNLTELQTLALYHN 152

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGC 229
           KL+                         +P+ IG L  L  L L++N+    IP SI  C
Sbjct: 153 KLS-----------------------GRLPDAIGRLVNLEELYLYENQFTGEIPESIGDC 189

Query: 230 CSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNN 285
            SL    + GN    ++PA +G LS+L  LD   N+L       +  CQ +L +LDL++N
Sbjct: 190 ASLQMIDFFGNRFNGSIPASMGNLSQLIFLDFRQNELSGVIAPELGECQ-QLKILDLADN 248

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +LS                               G  P     LRS              
Sbjct: 249 ALS-------------------------------GSIPETFGKLRS-------------L 264

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           E  +     LS              AIP  ++E   IT+++++ N +      L   A L
Sbjct: 265 EQFMLYNNSLS-------------GAIPDGMFECRNITRVNIAHNRLSGSLLPLCGTARL 311

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 465
            +   + N       A     S L  ++L +N L          I  L +LD+S N  + 
Sbjct: 312 LSFDATNNSFDGAIPAQFGRSSGLQRVRLGSNMLSGPIPPSLGGITALTLLDVSSNALT- 370

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLT 524
                                    P  + +   L ++ LS N L  +IP+   +L  L 
Sbjct: 371 ----------------------GGFPATLAQCTNLSLVVLSHNRLSGAIPDWLGSLPQLG 408

Query: 525 ELDLSDNNIS-ALPPEL 540
           EL LS+N  + A+P +L
Sbjct: 409 ELTLSNNEFTGAIPVQL 425



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 152/390 (38%), Gaps = 76/390 (19%)

Query: 194 NLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N L G +P T+ +LSR+  +DL                       GN    ALPAELG+L
Sbjct: 3   NRLTGRVPRTLAALSRVHTIDLS----------------------GNMLSGALPAELGRL 40

Query: 253 SKLGTLDLHSNQL-----KEYCV--EACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 304
            +L  L L  NQL      + C   EA    +  L LS N+ +G +P  + +   L +L 
Sbjct: 41  PQLTFLVLSDNQLTGSVPGDLCGGDEAESSSIEHLMLSMNNFTGEIPEGLSRCRALTQLG 100

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L  N L        +G  PA L  L   + L  N +S +     +L  +    ++     
Sbjct: 101 LANNSL--------SGVIPAALGELGNLTDLVLNNNSLSGELPPELFNLTELQTLALYHN 152

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
            L G     +P  I     + +L L  N    E+P  +  CASLQ +    N+      A
Sbjct: 153 KLSGR----LPDAIGRLVNLEELYLYENQFTGEIPESIGDCASLQMIDFFGNRFNGSIPA 208

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQE 479
            + +LS L  L    N L  V +    +   L+ILDL+ N    S+PE   F  L  L++
Sbjct: 209 SMGNLSQLIFLDFRQNELSGVIAPELGECQQLKILDLADNALSGSIPET--FGKLRSLEQ 266

Query: 480 LYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ------------------------SIP 514
             L    L  A P  +   + +  ++++ N L                         +IP
Sbjct: 267 FMLYNNSLSGAIPDGMFECRNITRVNIAHNRLSGSLLPLCGTARLLSFDATNNSFDGAIP 326

Query: 515 EGFKNLTSLTELDLSDNNISA-LPPELVSV 543
             F   + L  + L  N +S  +PP L  +
Sbjct: 327 AQFGRSSGLQRVRLGSNMLSGPIPPSLGGI 356


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|291222879|ref|XP_002731445.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 682

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 256/567 (45%), Gaps = 68/567 (11%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           +LS R L ++P +V K+F+             L++L L HNN++KL   L +L  L+ L+
Sbjct: 16  HLSCRGLSNIPADVCKHFE-------------LRQLDLQHNNLQKLPSQLADLK-LSNLD 61

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S NK   LP  I +L  L+ L  + N + K+P E+     L       N++   P  + 
Sbjct: 62  ISSNKFKVLPPVICKLMKLRYLYSNSNQLKKLPMELKELKLLEVLRLLGNEIDHFPPVIP 121

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
              +L +   S N + S+P+ ++   ++++LD+  NKL  L + L    T L  L    N
Sbjct: 122 LMTSLVELNLSGNSLHSIPKGISSLKRLTELDLGYNKLDSLPDEL-CKLTNLKTLYVQGN 180

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA-ELGKLS 253
            L  +P  I  L +L  L L  N++  +P+S+    SL    + NN L   P     KL 
Sbjct: 181 NLASLPSEINGLRKLRNLLLTDNKLRELPASLVEVTSLRIVSVTNNHLECFPELFFTKLK 240

Query: 254 KLGTLDLHSNQLKE---YCVEACQLRLSVLD--------LSNNSLSGLPPEIGKM----- 297
           +L T +   N LK      VE     L   D        +++N+      ++G+      
Sbjct: 241 RLKTFNCEGNNLKHPPRRVVEGGLKELRKYDQQQAKGYMVADNTTEV---QLGEKRTRCD 297

Query: 298 -----------TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST--- 343
                      T L+ LL+   P+ ++ + +++     +++ + +R P   DS A+    
Sbjct: 298 GDDENLYSRTSTVLKTLLIHLAPVFSIHAQILSSGR-GIIRTMMARTP--ADSSAARPPF 354

Query: 344 -TKEDLITMATRLSVTS-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            + + L      L   S           + L  +G  L  +P+E+ +  ++ +L++ +N+
Sbjct: 355 FSPDGLRCHYAELGAVSLSPDVTKETDIEHLQAQGNKLCDLPAELCKLDQLIELEIQQNN 414

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
            + LP  +    SL  L  S+N ++  P   L  L  L  ++LD+N   + P+    +I 
Sbjct: 415 FKTLPNVVCELPSLSLLRASKNFLQSLPPG-LKKLMKLKAIELDDNAFTEFPT-VLTEIK 472

Query: 452 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
            L+IL L  N + SLP          L  L L + QLR  P D+  L+ L  L++S N L
Sbjct: 473 SLKILILDSNFLISLPVEIGMMD-KQLTHLSLGKNQLRALPDDVCNLKHLTHLNVSYNML 531

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALP 537
           +++P  F NL  L EL L  N I+ LP
Sbjct: 532 ETLPNNFGNLKKLRELYLHSNRITVLP 558



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 211/505 (41%), Gaps = 80/505 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L+ N++  + + + +L  LT L++ +NKL  LP  + +L  LK+L V  N++  +
Sbjct: 126 LVELNLSGNSLHSIPKGISSLKRLTELDLGYNKLDSLPDELCKLTNLKTLYVQGNNLASL 185

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE-DLADCSKMSKL 165
           P EI     L     + N+L+ELP+SL    +L     +NN +   PE       ++   
Sbjct: 186 PSEINGLRKLRNLLLTDNKLRELPASLVEVTSLRIVSVTNNHLECFPELFFTKLKRLKTF 245

Query: 166 DVEGNKLT-----VLSNNL---------------IASWTMLTELIASKNLLNGMPETIGS 205
           + EGN L      V+   L               +A  T   +L   +   +G  E + S
Sbjct: 246 NCEGNNLKHPPRRVVEGGLKELRKYDQQQAKGYMVADNTTEVQLGEKRTRCDGDDENLYS 305

Query: 206 LSRLI--RLDLHQNRILSIPSSI----SGCCSLAEFYMGNNALSALPAELG------KLS 253
            +  +   L +H   + SI + I     G           ++ +A P            +
Sbjct: 306 RTSTVLKTLLIHLAPVFSIHAQILSSGRGIIRTMMARTPADSSAARPPFFSPDGLRCHYA 365

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +LG + L  +  KE  +E  Q +        N L  LP E+ K+  L +L +  N  +TL
Sbjct: 366 ELGAVSLSPDVTKETDIEHLQAQ-------GNKLCDLPAELCKLDQLIELEIQQNNFKTL 418

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            + +   P+ +LL+                               SK        L ++P
Sbjct: 419 PNVVCELPSLSLLR------------------------------ASKNF------LQSLP 442

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             + +  ++  ++L  N+  E P  L+   SL+ LIL  N +   P  I      L+ L 
Sbjct: 443 PGLKKLMKLKAIELDDNAFTEFPTVLTEIKSLKILILDSNFLISLPVEIGMMDKQLTHLS 502

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 492
           L  N LR +P D   ++  L  L++SYN + +LP N  F +L  L+ELYL   ++   PT
Sbjct: 503 LGKNQLRALPDD-VCNLKHLTHLNVSYNMLETLPNN--FGNLKKLRELYLHSNRITVLPT 559

Query: 493 DILRLQQLRILDLSQNSLQSIPEGF 517
            IL L  L  + L  N L  +P GF
Sbjct: 560 SILHLTNLVTMTLQNNFLSQLPPGF 584



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 192/451 (42%), Gaps = 47/451 (10%)

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           K   S   L  +P+ + +   L      +N +  LP  LAD  K+S LD+  NK  VL  
Sbjct: 14  KCHLSCRGLSNIPADVCKHFELRQLDLQHNNLQKLPSQLADL-KLSNLDISSNKFKVLP- 71

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            +I     L  L ++ N L  +P  +  L  L  L L  N I   P  I    SL E  +
Sbjct: 72  PVICKLMKLRYLYSNSNQLKKLPMELKELKLLEVLRLLGNEIDHFPPVIPLMTSLVELNL 131

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
             N+L ++P  +  L +L  LDL  N+L     E C+L  L  L +  N+L+ LP EI  
Sbjct: 132 SGNSLHSIPKGISSLKRLTELDLGYNKLDSLPDELCKLTNLKTLYVQGNNLASLPSEING 191

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  LR LLLT N LR L +SLV        +    R+    ++      E   T   RL 
Sbjct: 192 LRKLRNLLLTDNKLRELPASLV--------EVTSLRIVSVTNNHLECFPELFFTKLKRL- 242

Query: 357 VTSKELSLEGMNLSAIPSEIWEAG--EITKLD--------LSRNSIQ-ELPPELSSC--- 402
              K  + EG NL   P  + E G  E+ K D        ++ N+ + +L  + + C   
Sbjct: 243 ---KTFNCEGNNLKHPPRRVVEGGLKELRKYDQQQAKGYMVADNTTEVQLGEKRTRCDGD 299

Query: 403 ---------ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
                      L+TL++    +      IL+S   +         + + P+D     P  
Sbjct: 300 DENLYSRTSTVLKTLLIHLAPVFSIHAQILSSGRGII-----RTMMARTPADSSAARPPF 354

Query: 454 QILD-LSYNIASLPE---NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
              D L  + A L     +P  +    ++ L  +  +L + P ++ +L QL  L++ QN+
Sbjct: 355 FSPDGLRCHYAELGAVSLSPDVTKETDIEHLQAQGNKLCDLPAELCKLDQLIELEIQQNN 414

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +++P     L SL+ L  S N + +LPP L
Sbjct: 415 FKTLPNVVCELPSLSLLRASKNFLQSLPPGL 445



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 3/237 (1%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  D++ L    N +  L  +L  L  L  L +  N    LP  + EL  L  L  S N 
Sbjct: 378 KETDIEHLQAQGNKLCDLPAELCKLDQLIELEIQQNNFKTLPNVVCELPSLSLLRASKNF 437

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK- 161
           +  +P  +     L   +   N   E P+ L    +L      +N + SLP ++    K 
Sbjct: 438 LQSLPPGLKKLMKLKAIELDDNAFTEFPTVLTEIKSLKILILDSNFLISLPVEIGMMDKQ 497

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++ L +  N+L  L ++ + +   LT L  S N+L  +P   G+L +L  L LH NRI  
Sbjct: 498 LTHLSLGKNQLRALPDD-VCNLKHLTHLNVSYNMLETLPNNFGNLKKLRELYLHSNRITV 556

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLRL 277
           +P+SI    +L    + NN LS LP      L K+  L +         V AC +R+
Sbjct: 557 LPTSILHLTNLVTMTLQNNFLSQLPPGFSSCLKKITYLSVDQIPEAHTPVSACDVRI 613



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 19/227 (8%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +   T +  L A  N L  +P  +  L +LI L++ QN   ++P+ +    SL+      
Sbjct: 376 VTKETDIEHLQAQGNKLCDLPAELCKLDQLIELEIQQNNFKTLPNVVCELPSLSLLRASK 435

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM- 297
           N L +LP  L KL KL  ++L  N   E+     +++ L +L L +N L  LP EIG M 
Sbjct: 436 NFLQSLPPGLKKLMKLKAIELDDNAFTEFPTVLTEIKSLKILILDSNFLISLPVEIGMMD 495

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L  L L  N LR L   + N      LK+L         +  + +   L T+      
Sbjct: 496 KQLTHLSLGKNQLRALPDDVCN------LKHL---------THLNVSYNMLETLPNNFGN 540

Query: 358 TSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             K  EL L    ++ +P+ I     +  + L  N + +LPP  SSC
Sbjct: 541 LKKLRELYLHSNRITVLPTSILHLTNLVTMTLQNNFLSQLPPGFSSC 587


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 216/499 (43%), Gaps = 65/499 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L    +  L E L NL  L  L++  N L  LPA +G L  L+ L +    + ++
Sbjct: 344 LVTLSLVDCELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTEL 403

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G    L     + N L  LP SLG+   L D   S N +T LP  L     + +L 
Sbjct: 404 PATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLA 463

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N+LT     L      +  L  S N L  +P+ +G L RL  L L  N + S+P +I
Sbjct: 464 AFTNQLTRFPVEL----AQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETI 519

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
               SL    +G+N L+ALP  +G+LS                      RLS L+L NN 
Sbjct: 520 GQLDSLEMLTLGDNQLTALPQRIGQLS----------------------RLSWLELGNNR 557

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG----PTPAL-LKYLRSRLPENEDSEA 341
           L  LP  IG +T+L  +++  NPL  L +S V G     T +L L YLR RLP       
Sbjct: 558 LRELPESIGSLTSLTAVVIGNNPLEILPAS-VGGWQRLRTASLQLPYLR-RLP------- 608

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                D I    +L    ++L++E   L  +P  + +   +T L LS N +  LP  +  
Sbjct: 609 -----DQIGNWQQL----EDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGK 659

Query: 402 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
              L+ L++S            T+ S L   +L N P   V      D+ + Q       
Sbjct: 660 LTRLRQLVVSARSDS-------TTGSGLG--RLTNLPADLVNCPALTDLTVQQQQAFDGG 710

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
            A        ++LP LQ L      + +    +     L  L+L QN L  +P    ++ 
Sbjct: 711 DALRLS----AALPRLQTLSFINCGITDLSGIVWSKLSLVNLNLMQNRLSQLPNSLLDMP 766

Query: 522 SLTELDLSDNNISALPPEL 540
           +LT+++L+DNN   LPP+L
Sbjct: 767 NLTQINLADNN---LPPQL 782



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 221/525 (42%), Gaps = 64/525 (12%)

Query: 41  WWEAVDLQKLILAHN-NIEKLKEDLRNLPLLTVLNVS-HNKLSELPAAIGELHMLKSLDV 98
           W     +++L L+ N N+ +    L  LP L  L +   +  +ELP A     + +  ++
Sbjct: 166 WDRLTSVRELTLSTNLNVRQALSQLSRLPALESLTLYLWDTSAELPTAADWALLPQLREL 225

Query: 99  SFNSIMKIPD---EIGSATALVKFDCSSNQLKE---LPSSLGRCLNLS-DFKASNNCITS 151
           + N     PD    +G  T L K   SS QL +   L +SL R   L  D+    + +  
Sbjct: 226 TVNGFDTRPDWLIGLGRLTNLRKLTFSSGQLADMNALFTSLQRLETLDLDYVGPADRLPR 285

Query: 152 LPEDLADCSKMSKLDVE---GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           L   LA    +  L +      +  V  ++ +A  T L  L      L  +P ++ +  +
Sbjct: 286 L--RLAALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHLTLDGIRLAALPRSLLANPQ 343

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L+ L L    + ++P S+     L E ++  N L  LPA +G+L++L  L L   +L E 
Sbjct: 344 LVTLSLVDCELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTEL 403

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL +L+ L  + N L+ LP  +G++  LR L ++ N L  L  SL          
Sbjct: 404 PATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSL---------- 453

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSV---TSKELSLEGMNLSAIPSEIWEAGEITK 384
               +LP  E   A T +       TR  V     + L L    L+ +P  + E   +  
Sbjct: 454 ---RQLPALERLAAFTNQ------LTRFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRS 504

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L+ N +  LP  +    SL+ L L  N++   P  I   LS LS L+L NN LR++P 
Sbjct: 505 LTLAGNPLTSLPETIGQLDSLEMLTLGDNQLTALPQRI-GQLSRLSWLELGNNRLRELPE 563

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLP------------HLQELYLRRMQLREAPT 492
                     I  L+   A +  N P   LP             LQ  YLRR+     P 
Sbjct: 564 S---------IGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASLQLPYLRRL-----PD 609

Query: 493 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            I   QQL  L +  + L  +P+   +  SLT L LS N +  LP
Sbjct: 610 QIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLP 654



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 34/312 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L +VP       D  GE  +      L+ L LA N +  L E +  L  L +L
Sbjct: 482 LYLSDNQLTNVP-------DAVGELRR------LRSLTLAGNPLTSLPETIGQLDSLEML 528

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LP  IG+L  L  L++  N + ++P+ IGS T+L      +N L+ LP+S+
Sbjct: 529 TLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASV 588

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L         +  LP+ + +  ++  L +E ++L +L + L    + LT L  S 
Sbjct: 589 GGWQRLRTASLQLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRS-LTVLTLSG 647

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ----------NRILSIPSSISGCCSLAEF-------Y 236
           N L G+PE +G L+RL +L +             R+ ++P+ +  C +L +        +
Sbjct: 648 NKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQQAF 707

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
            G +AL  L A L +L  L  ++     L    +   +L L  L+L  N LS LP  +  
Sbjct: 708 DGGDALR-LSAALPRLQTLSFINCGITDLS--GIVWSKLSLVNLNLMQNRLSQLPNSLLD 764

Query: 297 MTTLRKLLLTGN 308
           M  L ++ L  N
Sbjct: 765 MPNLTQINLADN 776


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 11/309 (3%)

Query: 10  TSGSLNLSNRSLR----DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           T G L L N S +    +V  E Y++  +A +       +D++ L L+   ++ L + + 
Sbjct: 14  TIGLLFLINLSCKIQAEEVEPEAYQDLTKALQN-----PLDVRVLDLSEQKLKALPKKIG 68

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  LN+  N+L+ +   I +L  L+ L++  N +  I  EI     L   D  SNQ
Sbjct: 69  QLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQ 128

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           +  L   +G+  NL     +NN +T+LP+++     +  L++  N+L  L    IA    
Sbjct: 129 ITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKE-IAQLKN 187

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S+N L  +P+ IG L +L  L+L  N+++++P  I+   +L E Y+  N L  L
Sbjct: 188 LQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTL 247

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L KL  L L++NQL     E  QL+ L VL LS N    +P E G++  L++L 
Sbjct: 248 PKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELN 307

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 308 LDANQLTTI 316



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 129/244 (52%), Gaps = 2/244 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  + +++  L  L VL+   N+++ L   IG+L  LK L ++ N +  
Sbjct: 95  NLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  +NQL  LP  + +  NL +   S N + +LP+++    K+ +L
Sbjct: 155 LPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQEL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+L  L    IA    L EL  S+N L  +P+ IG L +L +L L+ N++ +IP+ 
Sbjct: 215 NLWNNQLITLPKE-IAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNE 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I+   +L   ++  N    +P E G+L  L  L+L +NQL     E  QL+ L  L L N
Sbjct: 274 IAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRN 333

Query: 285 NSLS 288
           N  S
Sbjct: 334 NQFS 337



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 42/301 (13%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L ALP ++G+L  L  L+L +NQL     E  QL+ L  L+L  N L+ +  EI ++  L
Sbjct: 60  LKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNL 119

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           + L    N + TL   +  G    L                                  K
Sbjct: 120 QVLDFGSNQITTLSQEI--GQLQNL----------------------------------K 143

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 420
            L L    L+ +P EI +   +  L+L  N +  LP E++   +LQ L LS N++   P 
Sbjct: 144 VLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 203

Query: 421 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 479
            I   L  L  L L NN L  +P +    +  LQ L LS N + +LP+      L  LQ+
Sbjct: 204 EI-GQLEKLQELNLWNNQLITLPKE-IAQLKNLQELYLSENQLMTLPK--EIGQLEKLQK 259

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           LYL   QL   P +I +LQ L++L LS N  ++IP  F  L +L EL+L  N ++ +P E
Sbjct: 260 LYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKE 319

Query: 540 L 540
           +
Sbjct: 320 I 320



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 41/270 (15%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + VLDLS   L  LP +IG++  L++L L  N L T+   +                 
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEI----------------- 90

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                      E L  +        +EL+L+   L+ I  EI +   +  LD   N I  
Sbjct: 91  -----------EQLKNL--------QELNLDANQLTTILKEIEQLKNLQVLDFGSNQITT 131

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           L  E+    +L+ L L+ N++   P  I   L +L  L L NN L  +P +    +  LQ
Sbjct: 132 LSQEIGQLQNLKVLFLNNNQLTTLPKEI-GQLKNLQTLNLWNNQLITLPKE-IAQLKNLQ 189

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L LS N + +LP+      L  LQEL L   QL   P +I +L+ L+ L LS+N L ++
Sbjct: 190 ELYLSENQLMTLPK--EIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTL 247

Query: 514 PEGFKNLTSLTELDLSDNNISALPPELVSV 543
           P+    L  L +L L+ N ++ +P E+  +
Sbjct: 248 PKEIGQLEKLQKLYLNANQLTTIPNEIAQL 277



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +LNL N  L  +P E+   KN  E    +     +         LQ+L L +N +  L +
Sbjct: 167 TLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPK 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  IG+L  L+ L ++ N +  IP+EI     L     S
Sbjct: 227 EIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLS 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            NQ K +P   G+  NL +     N +T++P+++     +  L +  N+ ++
Sbjct: 287 YNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSI 338


>gi|418677552|ref|ZP_13238826.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687293|ref|ZP_13248452.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418742391|ref|ZP_13298764.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400320742|gb|EJO68602.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737617|gb|EKQ82356.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410750749|gb|EKR07729.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 403

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 177/352 (50%), Gaps = 38/352 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L+ LP  IG+L  L+ L +  N +  +P+EIG    L   D + N++   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  NL     + N ++ LPE++ + ++++ L++  N+LT L   +     +LT L  
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLT-LYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N LN +P  +G L  LI L L  N+++S+P  I    +L   ++ +N  + LP E+G+
Sbjct: 169 SGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGE 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LD+  N+   +  E  +L +L+VL+LSNN L+ LP EIG++  L  L L+ N L
Sbjct: 229 LENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  +  L++                       L V    L L G NLS
Sbjct: 289 NSL---------PNEMGQLKN-----------------------LDV----LYLNGNNLS 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            +P EI E  +++ L L  N +  LP E+    +L TL LS NK+   P+ +
Sbjct: 313 NLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNEL 364



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 143/273 (52%), Gaps = 6/273 (2%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++W+  +L+ L L  N +  L E++R L  L VLN++ N+L+ LP  IG+L  L +L +S
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLS 169

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++  +P+E+G    L+    S N+L  LP  + +  NL      +N   +LPE++ + 
Sbjct: 170 GNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGEL 229

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             +  LD+  N+ +         W +  L  L  S N L  +P+ IG L  L  L L  N
Sbjct: 230 ENLKILDISRNRFSTFPKEF---WKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ S+P+ +    +L   Y+  N LS LP E+G+L KL  L L SNQL     E  QL  
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L  L LSNN L  +P E+G++  L  L L  NP
Sbjct: 347 LVTLSLSNNKLISIPNELGQLRNLSLLNLRYNP 379



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK       L+LS+  L  +P E+              + V+L++L L +N +  L E++
Sbjct: 42  LKTPNEVRILDLSSNRLTTLPKEI-------------GQLVNLERLYLLNNELTTLPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L+++ N++S  P    +L  L+ L ++ N +  +P+EI     L   + + N
Sbjct: 89  GKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL     S N + SLP ++     +  L + GNKL  L    I    
Sbjct: 149 QLTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKE-IRQLG 207

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N  N +PE IG L  L  LD+ +NR  + P        L    + NN L+ 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTT 267

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  N+L     E  QL+ L VL L+ N+LS LP EIG++  L  L
Sbjct: 268 LPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSIL 327

Query: 304 LLTGNPLRTL 313
            L  N L  L
Sbjct: 328 KLDSNQLTIL 337



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR+ ++P  I    +L   Y+ NN L+ LP E+GKL  L TLD+  N++  +  E
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L VL L+ N LS LP EI ++  L  L L  N L TL         P  +  L 
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTL---------PKEIGQL- 160

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E+L+T           L L G NL+++P+E+ +   +  L LS N
Sbjct: 161 ---------------ENLLT-----------LYLSGNNLNSLPNEMGQLKNLISLYLSGN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
            +  LP E+    +L  L L  N+    P+ I   L +L  L +  N     P + +K +
Sbjct: 195 KLISLPKEIRQLGNLGILHLFDNEFNTLPEEI-GELENLKILDISRNRFSTFPKEFWK-L 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             L +L+LS N + +LP+      L +L  L+L   +L   P ++ +L+ L +L L+ N+
Sbjct: 253 KKLNVLNLSNNQLTTLPK--EIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PE    L  L+ L L  N ++ LP E+
Sbjct: 311 LSNLPEEIGELKKLSILKLDSNQLTILPKEI 341



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 28/161 (17%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLS N +  LP E+    +L+ L L  N++   P+ I          KL+N    
Sbjct: 47  EVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIG---------KLEN---- 93

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
                       L+ LD++ N I++ P+   F  L +L+ L+L   +L   P +I  L +
Sbjct: 94  ------------LKTLDITRNRISTFPK--EFWKLKNLEVLFLNGNRLSYLPEEIRELNR 139

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L +L+L+ N L ++P+    L +L  L LS NN+++LP E+
Sbjct: 140 LNVLNLNDNQLTTLPKEIGQLENLLTLYLSGNNLNSLPNEM 180


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 2/245 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N+L+ LP  IG+L  L+ L+++ N    +P EIG    L + D   NQ   L
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL     + N +TSLP+++     + +LD++GN+ T L    I     L  L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKE-IGQLQNLRVL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ IG L  L RLDL  N+  S+P  I     L    + +N  +  P E+
Sbjct: 138 NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 197

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +   L  L L  +QLK    E   L+ L  L L +N L+ LP EIG++  L +L L  N
Sbjct: 198 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDN 257

Query: 309 PLRTL 313
            L+TL
Sbjct: 258 KLKTL 262



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 130/264 (49%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L  N +  L +++  L  L VLN++ N+ + LP  IG+L  L+ LD+  N    
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + + NQL  LP  +G+  NL       N  TSLP+++     +  L
Sbjct: 78  LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVL 137

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++ GN+LT L    I     L  L  + N    +P+ IG L +L  L+L  NR    P  
Sbjct: 138 NLAGNQLTSLPKE-IGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKE 196

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  + L  LP E+  L  L +L L SNQL     E  QL+ L  L+L +
Sbjct: 197 IRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQD 256

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L  LP EIG++  L  L L  N
Sbjct: 257 NKLKTLPKEIGQLQKLEVLRLYSN 280



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 38/317 (11%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  + +  +P  IG    L K +   NQL  LP  +G+  NL     + N  TSLP+++ 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +LD++GN+ T L    I     L  L  + N L  +P+ IG L  L RLDL  N
Sbjct: 61  QLQNLERLDLDGNQFTSLPKE-IGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGN 119

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           +  S+P  I    +L    +  N L++LP E+G+L  L  LDL  NQ      E  QL +
Sbjct: 120 QFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQK 179

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L+L +N  +  P EI +  +L+ L L+G+ L+TL   ++      LL+ L+S     
Sbjct: 180 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL------LLQNLQS----- 228

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                    L L+   L+++P EI +   + +L+L  N ++ LP
Sbjct: 229 -------------------------LHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLP 263

Query: 397 PELSSCASLQTLILSRN 413
            E+     L+ L L  N
Sbjct: 264 KEIGQLQKLEVLRLYSN 280



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 137/306 (44%), Gaps = 42/306 (13%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           MG + L +LP  +G    L  L+L  NQL     E  QL+ L VL+L+ N  + LP EIG
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L +L L GN   +L   +        L+ LR                         
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI------GQLQNLRV------------------------ 90

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                 L+L G  L+++P EI +   + +LDL  N    LP E+    +L+ L L+ N++
Sbjct: 91  ------LNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQL 144

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
              P  I   L +L  L L  N    +P +    +  L+ L+L +N     P+       
Sbjct: 145 TSLPKEI-GQLQNLERLDLAGNQFTSLPKE-IGQLQKLEALNLDHNRFTIFPKE--IRQQ 200

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
             L+ L L   QL+  P +IL LQ L+ L L  N L S+P+    L +L EL+L DN + 
Sbjct: 201 QSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLK 260

Query: 535 ALPPEL 540
            LP E+
Sbjct: 261 TLPKEI 266



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P E+              +  +L++L LA N    L +++  L  L  L
Sbjct: 137 LNLAGNQLTSLPKEI-------------GQLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+ HN+ +  P  I +   LK L +S + +  +P EI     L      SNQL  LP  +
Sbjct: 184 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 243

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +    +N + +LP+++    K+  L +  N  ++
Sbjct: 244 GQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSL 284


>gi|348553817|ref|XP_003462722.1| PREDICTED: protein LAP2-like isoform 2 [Cavia porcellus]
          Length = 1381

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 194

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  L+ IP  I    ++T LD
Sbjct: 195 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 125/241 (51%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N +  L E L  L  L  L+V  N+L  LP  IG L  LK L +  N + 
Sbjct: 151 CNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLS 210

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP E+GS  +L   D S N+L+ LP  +G  L+L+D   S N I  LPE +    ++S 
Sbjct: 211 DIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSI 270

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L  + N+L  L  + I     LTEL+ ++N L  +P +IG L +L   +  +NR+ S+P 
Sbjct: 271 LKADQNRLVQLPES-IGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPK 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GCCSL    +  N L  +P EL + S+L  LDL  N+L    +    LRL  L LS 
Sbjct: 330 EIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTSLRLKALWLSE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 202/482 (41%), Gaps = 87/482 (18%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   +++  + SL  VP+E+Y+      E              ++    L+KL L+ 
Sbjct: 9   RCNRHIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  D+ N   L  L++S N + ELP +I     L+  D S N + ++P+      
Sbjct: 69  NEIQRLPGDIANFNQLVELDISRNDIMELPESISYCKTLQVADFSGNPLTRLPESFPELR 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV------- 167
            L     +   L+ LP ++G   NL   +   N +T LPE L+   K+ +LDV       
Sbjct: 129 NLACLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYN 188

Query: 168 ----------------EGNKLT----------------VLSNNL------IASWTMLTEL 189
                           +GN+L+                V  N L      + +   LT+L
Sbjct: 189 LPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDL 248

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           + S+NL++ +PE IG L RL  L   QNR++ +P SI  C SL E  +  N L  LP  +
Sbjct: 249 LVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRSI 308

Query: 250 GKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           GKL KL   +   N+L     E   C   L+VL +  N L  +PPE+ + + L  L L+G
Sbjct: 309 GKLKKLSNFNCDRNRLASLPKEIGGC-CSLNVLCVRENRLMRIPPELSQASELHVLDLSG 367

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  +L +    AL       L EN+        + L+T  T +   S E  L  +
Sbjct: 368 NRLLYLPLTLTSLRLKALW------LSENQ-------SQPLLTFQTDVDPESGEKVLTCV 414

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L   P E    G                  L+ C +L++L+ S      W D     +S
Sbjct: 415 LLPQQPCESENTGS---------------DNLARCGALESLVESSILDDTWDDKAANRMS 459

Query: 428 SL 429
           ++
Sbjct: 460 TI 461



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 160/359 (44%), Gaps = 17/359 (4%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+   +L++L +L L  N I  +P  I+    L E  +  N +  L
Sbjct: 38  LEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMEL 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +LR L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL             S+L + E+ +  + +   +       V+ K+L L
Sbjct: 158 LRENLLTYLPESL-------------SQLQKLEELDVGSNELYNLPETIGCLVSLKDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS IP+E+     +T LD+S N ++ LP E+ +  SL  L++S+N I   P+ I  
Sbjct: 205 DGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L  LS LK D N L Q+P        + +++     + +LP +     L  L      R
Sbjct: 264 KLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRS--IGKLKKLSNFNCDR 321

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +L   P +I     L +L + +N L  IP      + L  LDLS N +  LP  L S+
Sbjct: 322 NRLASLPKEIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTSL 380



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 372 IPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           +P EI+   G + +L L  N +++LP    +   L+ L LS N+I+  P  I  + + L 
Sbjct: 27  VPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDI-ANFNQLV 85

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L +  N + ++P +       LQ+ D S N +  LPE+  F  L +L  L +  + L+ 
Sbjct: 86  ELDISRNDIMELP-ESISYCKTLQVADFSGNPLTRLPES--FPELRNLACLSINDISLQA 142

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            P +I  L  L  L+L +N L  +PE    L  L ELD+  N +  LP
Sbjct: 143 LPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLP 190


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 189/413 (45%), Gaps = 54/413 (13%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           + +R+   L L    +RD+P    KNF         +    L+KL L+ N I+++ +D++
Sbjct: 31  RYSRSLEELLLDANHIRDLP----KNF---------FRLAKLRKLSLSDNEIQRIPQDIQ 77

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           N   L  L+VS N +S++P  I  +  L+  D S N I ++P        L     +   
Sbjct: 78  NFENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMS 137

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L  LP   G   NL   +   N + +LPE ++  +K+ +LD+  N + +L  + I S   
Sbjct: 138 LSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAH-IGSLPA 196

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LTEL    N L  +P+ +  L+ L  LD+ +N + S+P  I G  SL + ++  N L +L
Sbjct: 197 LTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESL 256

Query: 246 PAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P  +G LSKL  L +  N+L    Y +  C + L  L L+ N L+ LP  IG MT L  L
Sbjct: 257 PDGIGALSKLTILKVDQNRLTTLNYAIGKC-VALQELILTENFLTELPTSIGNMTKLTNL 315

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            +  N L  L         P  + +L                           V    LS
Sbjct: 316 NVDRNRLHEL---------PVEVGHL---------------------------VCLNVLS 339

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           L    L  +P+E+ +  E+  LD+S N +Q LP  L+   +L+ + LS N+ +
Sbjct: 340 LRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTGL-NLKAIWLSENQAQ 391



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 23/356 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N +  +P+    L++L +L L  N I  IP  I    +L E  +  N +S +
Sbjct: 36  LEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDI 95

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +  +  L   D  SN +        QL+ L+VL L++ SLS LP + G ++ L+ + 
Sbjct: 96  PETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVE 155

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--EL 362
           L  N LRTL  S+       L K  R  L +N          D+  +   +       EL
Sbjct: 156 LRENLLRTLPESMSQ-----LTKLERLDLGDN----------DIEILPAHIGSLPALTEL 200

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L+   L  +P E+ +   +  LD+S N +  +P E+    SL  L LS+N ++  PD I
Sbjct: 201 WLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDGI 260

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
             +LS L+ LK+D N L  + +        LQ L L+ N +  LP +    ++  L  L 
Sbjct: 261 -GALSKLTILKVDQNRLTTL-NYAIGKCVALQELILTENFLTELPTS--IGNMTKLTNLN 316

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           + R +L E P ++  L  L +L L +N L  +P    + + L  LD+S N +  LP
Sbjct: 317 VDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLP 372



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R S + +EL L+  ++  +P   +   ++ KL LS N IQ +P ++ +  +L  L +SRN
Sbjct: 31  RYSRSLEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRN 90

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D P+ I   + +L      +NP+ ++P+ GF  +  L +L L+  +++SLP +  F 
Sbjct: 91  DISDIPETI-KHVKALQVADFSSNPIPRLPA-GFVQLKNLTVLGLNDMSLSSLPLD--FG 146

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL +LQ + LR   LR  P  + +L +L  LDL  N ++ +P    +L +LTEL L  N 
Sbjct: 147 SLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQ 206

Query: 533 ISALPPEL 540
           +  LP EL
Sbjct: 207 LGQLPKEL 214



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+EL L    +R+ P +  RL +LR L LS N +Q IP+  +N  +L ELD+S N+IS +
Sbjct: 36  LEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDI 95

Query: 537 PPELVSV 543
           P  +  V
Sbjct: 96  PETIKHV 102


>gi|357138436|ref|XP_003570798.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Brachypodium distachyon]
          Length = 1033

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 163/549 (29%), Positives = 253/549 (46%), Gaps = 87/549 (15%)

Query: 47  LQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIM 104
           +  L LA  N+  K+   L  L  L VLN+S N  S  LP +   L  L++LDVS NS  
Sbjct: 71  VDSLDLAGKNLSGKVSGALLRLTSLAVLNLSSNAFSAALPKSFSPLPALRALDVSQNS-- 128

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
                         FD S       PS LG  L   +  + NN + +LP DLA+ + +  
Sbjct: 129 --------------FDGS------FPSGLGASLVFVN-GSGNNFVGALPLDLANATSLDT 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTEL----IASKNLLNGMPETIGSLSRLIRLDLHQNRI- 219
           +D+ G      S  + A++  LT+L    ++  N+   +P  +G L  L  L +  N + 
Sbjct: 168 IDLRG---CFFSGAIPAAYGALTKLKFLGLSGNNIGGAIPPELGELEALESLVIGYNELE 224

Query: 220 LSIPSSISGCCSLAEFYMG-NNALSALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLR- 276
            +IP  +    SL    +   N    +P ELGK+  L +L L+ N+L  E   E   +  
Sbjct: 225 GAIPPELGNLASLQYLDLAIGNLEGPIPPELGKMPSLASLFLYKNKLTGEIPAELGNVSS 284

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT----------------LRSSLVN 319
           L+ LDLS+N LSG +PPE+GKM+ LR L L  N L                  L ++ ++
Sbjct: 285 LAFLDLSDNLLSGAIPPEVGKMSQLRVLNLMCNRLTGEVPAAVGAMAALEVLELWNNSLS 344

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDL-----------------------ITMATRLS 356
           GP PA L   RS   +  D  +++    +                       I  A  LS
Sbjct: 345 GPLPAALG--RSSPLQWVDVSSNSFTGGIPPGICEGKALAKLIMFGNGFSGEIPAALALS 402

Query: 357 VTS-KELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 413
             S   + L+G  +  +IP+   +   + +L+L+ N ++ E+P +L+S +SL  + +SRN
Sbjct: 403 CDSLVRVRLQGNRINGSIPAGFGKLPWLQRLELAGNDLEGEIPVDLASSSSLSFVDVSRN 462

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPF 471
           +++    A L ++ SL       N +     D F++ P L  LDLS N     +P +   
Sbjct: 463 RLQGTLPAGLFAVPSLQSFMAAENLISGGIPDEFQECPALGALDLSGNRLTGGVPAS--L 520

Query: 472 SSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLS 529
           +S   L  L LRR  L  A P  + ++  L +LDLS NSL   IPE F +  +L  ++L+
Sbjct: 521 ASCQRLVSLNLRRNGLSGAIPPALGKMPALAVLDLSGNSLSGGIPESFGSSPALETMNLA 580

Query: 530 DNNISALPP 538
           DNN++   P
Sbjct: 581 DNNLTGPVP 589



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 124/275 (45%), Gaps = 36/275 (13%)

Query: 70  LTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSSNQL- 126
           L VL + +N LS  LPAA+G    L+ +DVS NS    IP  I    AL K     N   
Sbjct: 333 LEVLELWNNSLSGPLPAALGRSSPLQWVDVSSNSFTGGIPPGICEGKALAKLIMFGNGFS 392

Query: 127 KELPSSLG-RCLNLSDFK-------------------------ASNNCITSLPEDLADCS 160
            E+P++L   C +L   +                         A N+    +P DLA  S
Sbjct: 393 GEIPAALALSCDSLVRVRLQGNRINGSIPAGFGKLPWLQRLELAGNDLEGEIPVDLASSS 452

Query: 161 KMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLIRLDLHQNR 218
            +S +DV  N+L   L   L A    L   +A++NL+  G+P+       L  LDL  NR
Sbjct: 453 SLSFVDVSRNRLQGTLPAGLFAV-PSLQSFMAAENLISGGIPDEFQECPALGALDLSGNR 511

Query: 219 ILS-IPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQ 274
           +   +P+S++ C  L    +  N LS A+P  LGK+  L  LDL  N L     E     
Sbjct: 512 LTGGVPASLASCQRLVSLNLRRNGLSGAIPPALGKMPALAVLDLSGNSLSGGIPESFGSS 571

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             L  ++L++N+L+G  P  G + T+    L GNP
Sbjct: 572 PALETMNLADNNLTGPVPANGVLRTINPGELAGNP 606


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
 gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
          Length = 426

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 2/213 (0%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L+ L +S N +  +P EIG  T+LVK     N+L  +P+ +G+  +L   
Sbjct: 205 VPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGL 264

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N +TSLP ++   + +  L + GN+LT +    I   T LTEL  + N L  +P  
Sbjct: 265 WLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAE-IGQLTSLTELHLADNQLTSVPAE 323

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L RL L  N++ S+P+ I    SL   Y+G N L+++PAE+G+L++L  L+L  
Sbjct: 324 IGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEG 383

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
           NQL     E  QL  L  L L +N L+ +P  I
Sbjct: 384 NQLTSVPAEIGQLTSLERLYLGHNQLTSVPAVI 416



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 110/201 (54%), Gaps = 1/201 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N +  +  ++  L  L  L +  N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 215 LRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTSL 274

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  TAL       NQL  +P+ +G+  +L++   ++N +TS+P ++   + + +L 
Sbjct: 275 PAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLG 334

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I   T L  L    N L  +P  IG L+ L  L+L  N++ S+P+ I
Sbjct: 335 LRDNQLTSVPAE-IGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEI 393

Query: 227 SGCCSLAEFYMGNNALSALPA 247
               SL   Y+G+N L+++PA
Sbjct: 394 GQLTSLERLYLGHNQLTSVPA 414



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 37/264 (14%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +L++E   LT      +   + L +L  S+N L  +P  IG L+ L++L LH NR+
Sbjct: 189 GRVVELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRL 248

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P+ I    SL   ++ +N L++LPAE+G+L+ L  L L+ NQL     E  QL  L+
Sbjct: 249 TSVPAEIGQLTSLEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLT 308

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L++N L+ +P EIG++T+L +L L  N L ++         PA +  L S       
Sbjct: 309 ELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSV---------PAEIGQLTS------- 352

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                + L L G  L+++P+EI +  E+ +L+L  N +  +P E
Sbjct: 353 --------------------LERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAE 392

Query: 399 LSSCASLQTLILSRNKIKDWPDAI 422
           +    SL+ L L  N++   P  I
Sbjct: 393 IGQLTSLERLYLGHNQLTSVPAVI 416



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L HN +  L  ++  L  L VL +  N+L+ +PA IG+L  L  L ++ N +  +
Sbjct: 261 LEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSV 320

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +     NQL  +P+ +G+  +L       N +TS+P ++   +++ +L+
Sbjct: 321 PAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELN 380

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT                         +P  IG L+ L RL L  N++ S+P+ I
Sbjct: 381 LEGNQLT------------------------SVPAEIGQLTSLERLYLGHNQLTSVPAVI 416



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 6/182 (3%)

Query: 361 ELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           EL LE + L+ A+P+E+     + KL LSRN +  +P E+    SL  L L  N++   P
Sbjct: 193 ELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVP 252

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
            A +  L+SL  L L +N L  +P++    +  L++L L  N + S+P       L  L 
Sbjct: 253 -AEIGQLTSLEGLWLRHNQLTSLPAE-IGQLTALRVLLLYGNQLTSVPAE--IGQLTSLT 308

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL+L   QL   P +I +L  L  L L  N L S+P     LTSL  L L  N ++++P 
Sbjct: 309 ELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPA 368

Query: 539 EL 540
           E+
Sbjct: 369 EI 370



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 42/264 (15%)

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           R+  L+L +  L+G +P E+G+++ LRKL L+ N L ++         PA +  L S + 
Sbjct: 190 RVVELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSV---------PAEIGQLTSLV- 239

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                     +L L    L+++P+EI +   +  L L  N +  
Sbjct: 240 --------------------------KLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTS 273

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           LP E+    +L+ L+L  N++   P A +  L+SL+ L L +N L  VP++    +  L+
Sbjct: 274 LPAEIGQLTALRVLLLYGNQLTSVP-AEIGQLTSLTELHLADNQLTSVPAE-IGQLTSLE 331

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            L L  N + S+P       L  L+ LYL   +L   P +I +L +L+ L+L  N L S+
Sbjct: 332 RLGLRDNQLTSVPAE--IGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSV 389

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           P     LTSL  L L  N ++++P
Sbjct: 390 PAEIGQLTSLERLYLGHNQLTSVP 413



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 5/182 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++LSL    L+++P+EI +   + KL L  N +  +P E+    SL+ L L  N++   P
Sbjct: 216 RKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTSLP 275

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
            A +  L++L  L L  N L  VP++    +  L  L L+ N + S+P       L  L+
Sbjct: 276 -AEIGQLTALRVLLLYGNQLTSVPAE-IGQLTSLTELHLADNQLTSVPAE--IGQLTSLE 331

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L LR  QL   P +I +L  L  L L  N L S+P     LT L EL+L  N ++++P 
Sbjct: 332 RLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPA 391

Query: 539 EL 540
           E+
Sbjct: 392 EI 393



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 33/171 (19%)

Query: 377 WEA------GEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 429
           WE       G + +L+L    +   +P EL   ++L+ L LSRN++   P A +  L+SL
Sbjct: 180 WEGVTMENNGRVVELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSVP-AEIGQLTSL 238

Query: 430 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
             L L +N L  VP++                            L  L+ L+LR  QL  
Sbjct: 239 VKLYLHDNRLTSVPAE-------------------------IGQLTSLEGLWLRHNQLTS 273

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P +I +L  LR+L L  N L S+P     LTSLTEL L+DN ++++P E+
Sbjct: 274 LPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEI 324


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|348553823|ref|XP_003462725.1| PREDICTED: protein LAP2-like isoform 5 [Cavia porcellus]
          Length = 1407

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 194

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  L+ IP  I    ++T LD
Sbjct: 195 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 190/404 (47%), Gaps = 51/404 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 476
             P  I   L +L  L L +N L  +P +                              +
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKN 134

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQ+L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL+ N  + +
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTV 194

Query: 537 PPELV 541
             E++
Sbjct: 195 SKEVM 199


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|62646782|ref|XP_216085.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
 gi|109473061|ref|XP_001068373.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
          Length = 855

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 218/480 (45%), Gaps = 57/480 (11%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N LS +P  I   H LK L+ S+N I  IP E+     + +   +SN ++ L
Sbjct: 186 LETLSLQENGLSSIPQEIQLFHNLKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESL 245

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS L     L       N +T +P+ L     +  L++E N+LT+ S +L      L  L
Sbjct: 246 PSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSL-CFLPKLVSL 304

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N++  +P+ +  L  L  L ++ N++  +   I     + E ++ +N L A+  ++
Sbjct: 305 NLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKI 364

Query: 250 GKLSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
               +L  L+L +N L+       +CV      L  L LS+N+L  LP +I K+  LR+L
Sbjct: 365 ENFKELRLLNLDNNLLQSLPKKISHCV-----NLESLTLSDNNLEELPKKIRKLKNLRQL 419

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                                                    +  +I MA  +S  SK  S
Sbjct: 420 --------------------------------------HANRNKMIKMAEEISHLSKIHS 441

Query: 364 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           LE  G  ++ +P EI    EIT+++L+ N+I   P  L +  SL  L  + N I + P  
Sbjct: 442 LEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIP-V 500

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
            L+    L  L+L+ N +  + S+    +  L+ LDL+ N I  +P     S++  L  L
Sbjct: 501 DLSFSKQLLHLELNKNKI-TIFSEHLCSLTNLEYLDLAKNQIRKIPH--CISAMLSLHVL 557

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L   +    P ++  L+ L++LD+S+N L  IP     L  + +L+LS+NN +  P EL
Sbjct: 558 ILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAEL 617



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 187/391 (47%), Gaps = 18/391 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NN+E+L + +R L  L  L+ + NK+ ++   I  L  + SL+ S
Sbjct: 386 KISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFS 445

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P DL+  
Sbjct: 446 GNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFS 505

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NK+T+ S +L  S T L  L  +KN +  +P  I ++  L  L L  N+ 
Sbjct: 506 KQLLHLELNKNKITIFSEHL-CSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKF 564

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR--- 276
              P  +    +L    +  N L  +P+E+ KL K+  L+L +N    +  E CQL+   
Sbjct: 565 EIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLE 624

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L++  +S   L+ LP E+ +MT L+ L ++ N ++ +  ++  G    L+ +  S    
Sbjct: 625 DLNISQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNI--GELRNLITFHAS---- 678

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             +++ ++     +++    S     L L G NL+ +PS I++   + +++   N +   
Sbjct: 679 --NNQINSLPSSFLSLNVLQS-----LDLGGNNLTDLPSAIYKLSSLKEINFDDNPLLRP 731

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           P E+     + T+     +  D  + IL  +
Sbjct: 732 PMEICKGKQMHTITCYLQRADDRDEKILEKI 762



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 243/544 (44%), Gaps = 54/544 (9%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE------- 82
           K F  A  GD     + L+ L L  N +  + ++++    L VLN S+N++S        
Sbjct: 173 KTFQGADPGD----LLGLETLSLQENGLSSIPQEIQLFHNLKVLNASYNEISHIPKELLQ 228

Query: 83  ----------------LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                           LP+ +  L  L++L +  N +  IPD +     L   +   NQL
Sbjct: 229 LGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQL 288

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
                SL     L     + N I SLP+++ +   +  L +  NKLT L+   I     +
Sbjct: 289 TIFSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVE-IFQLLKI 347

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL  + N L  +   I +   L  L+L  N + S+P  IS C +L    + +N L  LP
Sbjct: 348 KELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELP 407

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            ++ KL  L  L  + N++ +   E   L ++  L+ S N ++ +P EI     + ++ L
Sbjct: 408 KKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIEIKNCKEITRVEL 467

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +      L    +   L +  + + E               +   LS + + L LE
Sbjct: 468 NYNNIMYFPVGLCALQSLDYLSFNGNYISE---------------IPVDLSFSKQLLHLE 512

Query: 366 -GMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
              N   I SE +     +  LDL++N I+++P  +S+  SL  LILS NK + +P   L
Sbjct: 513 LNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFPKE-L 571

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYL 482
            SL +L  L +  N L ++PS+  K +  +Q L+LS  N    P       L  L++L +
Sbjct: 572 CSLKNLQLLDISENQLHKIPSEISK-LKKIQKLNLSNNNFTHFP--AELCQLQTLEDLNI 628

Query: 483 RRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
            ++   +L   P ++ R+ QL+ L++S N+++ IP     L +L     S+N I++LP  
Sbjct: 629 SQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNIGELRNLITFHASNNQINSLPSS 688

Query: 540 LVSV 543
            +S+
Sbjct: 689 FLSL 692



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 216/532 (40%), Gaps = 103/532 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL+   +  +P EV              E  +L+ L++ HN +  L  ++  L  +  
Sbjct: 303 SLNLTGNMIGSLPKEV-------------RELKNLENLLMNHNKLTFLAVEIFQLLKIKE 349

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ NKL  +   I     L+ L++  N +  +P +I     L     S N L+ELP  
Sbjct: 350 LHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKK 409

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL    A+ N +  + E+++  SK+  L+  GN++T                   
Sbjct: 410 IRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQIT------------------- 450

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +P  I +   + R++L+ N I+  P  +    SL       N +S +P +L   
Sbjct: 451 -----HVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFS 505

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L+L+ N++  +    C L  L  LDL+ N +  +P  I  M +L  L+L+ N   
Sbjct: 506 KQLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFE 565

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                L +     LL      + EN+                               L  
Sbjct: 566 IFPKELCSLKNLQLLD-----ISENQ-------------------------------LHK 589

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR---NKIKDWPDAILTSLSS 428
           IPSEI +  +I KL+LS N+    P EL    +L+ L +S+    K+   P+ + + ++ 
Sbjct: 590 IPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNISQISGKKLTRLPEEV-SRMTQ 648

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 488
           L  L + NN ++++P +                            L +L   +    Q+ 
Sbjct: 649 LKALNISNNAIKEIPRN-------------------------IGELRNLITFHASNNQIN 683

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P+  L L  L+ LDL  N+L  +P     L+SL E++  DN +   P E+
Sbjct: 684 SLPSSFLSLNVLQSLDLGGNNLTDLPSAIYKLSSLKEINFDDNPLLRPPMEI 735



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           + L    +QE P ++     ++ L L +N+IK +  A    L  L  L L  N L  +P 
Sbjct: 142 VHLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKTFQGADPGDLLGLETLSLQENGLSSIPQ 201

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +  +    L++L+ SYN I+ +P+      L ++++L+L    +   P+ +  L+ L  L
Sbjct: 202 E-IQLFHNLKVLNASYNEISHIPKE--LLQLGNMRQLFLNSNHIESLPSGLENLRYLETL 258

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP------PELVSV 543
            L +N L  IP+    L +L  L+L  N ++         P+LVS+
Sbjct: 259 SLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSL 304


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 137/265 (51%), Gaps = 22/265 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L + +N + KL + ++ L  L V+++  NKL+ +P+ IG L  L+ LD+  N I 
Sbjct: 119 VHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGIS 178

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP ++G+ + L   D  SNQ+K++P ++G   +L      NN I SLP++L +  K+  
Sbjct: 179 TIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEH 238

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V  N+L              +    S+ L        G L  L  LDL +N+++ +P 
Sbjct: 239 LYVSNNRLD-------------SSFAKSRFL--------GKLQSLKTLDLSKNKLVRLPQ 277

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L    + NN L ALP  LG++  L  LDL +NQL        QL +L  L L 
Sbjct: 278 DIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILR 337

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGN 308
           NN L+ LP EI +M  L++L L GN
Sbjct: 338 NNQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 167/347 (48%), Gaps = 47/347 (13%)

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           +T+ SL  L + +L++     I  ++    +     + N  L  +P E+GKL KL  LDL
Sbjct: 25  DTLLSLQELEQKELYK----VIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDL 80

Query: 261 HSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             NQ+     C+ + +  L +LDL  + ++ LP  IG +  L+ L +  N L        
Sbjct: 81  GLNQIDTLPPCIGSLKF-LQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKL-------- 131

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                        +LP++            I   T+L V    + LEG  L+ IPSEI  
Sbjct: 132 ------------VKLPKS------------IKKLTQLQV----IDLEGNKLTRIPSEIGA 163

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  LDL +N I  +P +L + + L+ L L  N+IK  P AI   L SL  L L NN 
Sbjct: 164 LKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAI-GGLRSLKYLYLRNNL 222

Query: 439 LRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 496
           +  +P D  K++  L+ L +S N   +S  ++     L  L+ L L + +L   P DI++
Sbjct: 223 IDSLP-DELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQ 281

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L+ L+ L L  N LQ++P+    + +L ELDL +N ++ LP  ++ +
Sbjct: 282 LKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQL 328



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 150/359 (41%), Gaps = 45/359 (12%)

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           +  K L   + + +   +    L L    +  +P  I     L    +G N +  LP  +
Sbjct: 33  LEQKELYKVIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCI 92

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L  L  LDL  +++  Y  +     + L  L +  N L  LP  I K+T L+ + L G
Sbjct: 93  GSLKFLQILDLWGDKI-AYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEG 151

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L                    +R+P    SE    K            + + L LE  
Sbjct: 152 NKL--------------------TRIP----SEIGALK------------SLRVLDLEKN 175

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            +S IPS++    ++  LDL  N I+++P  +    SL+ L L  N I   PD  L ++ 
Sbjct: 176 GISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDE-LKNMV 234

Query: 428 SLSCLKLDNNPLRQ--VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
            L  L + NN L      S     +  L+ LDLS N +  LP++     L +L+ L L  
Sbjct: 235 KLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQD--IVQLKNLKTLILHN 292

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            QL+  P  +  ++ L  LDL  N L  +P+    L  L +L L +N ++ LP E+  +
Sbjct: 293 NQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQM 351


>gi|348553821|ref|XP_003462724.1| PREDICTED: protein LAP2-like isoform 4 [Cavia porcellus]
          Length = 1370

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 194

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  L+ IP  I    ++T LD
Sbjct: 195 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 165/333 (49%), Gaps = 21/333 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P +I
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAI 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +GKL KL  L+   N+L    KE  +  C   L+V  +
Sbjct: 286 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE--IGGC-CSLTVFCV 342

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            +N L+ +P E+ + T L  L + GN L  L  SL      AL       L +N+     
Sbjct: 343 RDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALW------LSDNQ----- 391

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
              + L+T  T    T+ E  L  + L  +PSE
Sbjct: 392 --SQPLLTFQTDTDHTTGEKILTCVLLPQLPSE 422



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-IGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   +++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVETIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  LP  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLEMLPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  IG   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAIGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTT-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAIGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTL 380



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|432104584|gb|ELK31196.1| Protein LAP2 [Myotis davidii]
          Length = 1457

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 194/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+N+L  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNALQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNALQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLVSIEELDCSFNEVEALPSS--IGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLT----------------VLSNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT                V  NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  I
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISACENLQDLLLSSNALQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T +    A  N L  +P  IG+   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 42/85 (49%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +++     HN +++L  ++ N   +TVL +  NKL  LP  +G++  LK +++S N + 
Sbjct: 322 TNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLK 381

Query: 105 KIPDEIGSATALVKFDCSSNQLKEL 129
            +P        L     S NQ K L
Sbjct: 382 NLPFSFTKLQQLTAMWLSDNQSKPL 406


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
 gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
          Length = 976

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 206/422 (48%), Gaps = 52/422 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAH 54
           +  R   S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ 
Sbjct: 9   RCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L++S N + E+P +I     L+  D S N + ++PD      
Sbjct: 69  NEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLR 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L     +   L+ LPS +G   NL   +   N + S+P  L+   K+ +LD+  N L V
Sbjct: 129 SLAHLALNDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQV 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L + L  +   L EL   +N L+ +P  +G+L RL+ LD+ +N++  +P+ ISG  SL +
Sbjct: 189 LPDTL-GALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPP 292
             +  N LS+LP+ LG+L +L  L +  N+L +    +  C+  LS + L+ N L+ LP 
Sbjct: 248 LLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDCE-NLSEIILTENLLTVLPK 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +G +T L  L +  N L +L S                                 I   
Sbjct: 307 SMGNLTKLTNLNVDRNRLLSLPSE--------------------------------IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L+V    LSL    LSA+P E+  A E+  LD++ N +  LP  L++  +L+ L L+ 
Sbjct: 335 ASLNV----LSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFALTNL-NLKALWLAE 389

Query: 413 NK 414
           N+
Sbjct: 390 NQ 391



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 171/358 (47%), Gaps = 39/358 (10%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +  N ++                      
Sbjct: 106 SLEIADF--SGNPLSRLPDGFTQLRSLAHLAL--NDVS---------------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+LS L+ L+L +N + S+P S+S    L +  +G+N L  LP  LG L  L
Sbjct: 140 LQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E   LR L  LD+S N L  LP EI  + +L  LLL+ N L +L 
Sbjct: 200 RELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKE---------LSL 364
           SSL      ++LK  ++RL +  +S        ++I     L+V  K          L++
Sbjct: 260 SSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNV 319

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
           +   L ++PSEI     +  L L  N +  LPPEL+    L  L ++ N++ + P A+
Sbjct: 320 DRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFAL 377



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 188/452 (41%), Gaps = 109/452 (24%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        +A++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------VANFMQLVELDISRNDIPEIPESIKFCKSLEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L +LP+++G LS L TL+L           
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQSLPSDIGNLSNLVTLELRE--------- 160

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                        N L  +P  +  +  L +L L  N L+ L  +L  G  P L      
Sbjct: 161 -------------NVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LS++PSE+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSSLPSELGNLRRLVCLDVSENK 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           +++LP E+S   SL  L+LS+N++   P + L  L  LS LK+D N L Q+ ++   D  
Sbjct: 232 LEQLPAEISGLMSLTDLLLSQNQLSSLPSS-LGQLKQLSILKVDQNRLTQL-TESIGDCE 289

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
            L  + L+ N+ ++                         P  +  L +L  L++ +N L 
Sbjct: 290 NLSEIILTENLLTV------------------------LPKSMGNLTKLTNLNVDRNRLL 325

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+P       SL  L L DN +SALPPEL   
Sbjct: 326 SLPSEIGGCASLNVLSLRDNQLSALPPELAGA 357



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 63/292 (21%)

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C   +  +D  + SL  +P EI + + +L +LLL  N LR L       P P    + R 
Sbjct: 10  CNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLREL-------PKP----FFR- 57

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                           L+ +        ++L L    +  +P E+    ++ +LD+SRN 
Sbjct: 58  ----------------LLNL--------RKLGLSDNEIQRLPPEVANFMQLVELDISRND 93

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD------ 445
           I E+P  +  C SL+    S N +   PD   T L SL+ L L++  L+ +PSD      
Sbjct: 94  IPEIPESIKFCKSLEIADFSGNPLSRLPDG-FTQLRSLAHLALNDVSLQSLPSDIGNLSN 152

Query: 446 ---------GFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
                      K +PM       L+ LDL  N +  LP+     +LP+L+EL+L R QL 
Sbjct: 153 LVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDT--LGALPNLRELWLDRNQLS 210

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             P+++  L++L  LD+S+N L+ +P     L SLT+L LS N +S+LP  L
Sbjct: 211 SLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLPSSL 262



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L+  P +I R  + L  L L  N L+ +P+ F  L +L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEVANF 81


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 199/420 (47%), Gaps = 48/420 (11%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   +++  + SL  VP E+Y+      E            +++++ V L+KL L+ 
Sbjct: 9   RCNRHXETIDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQ 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L     +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  
Sbjct: 129 NLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +
Sbjct: 189 LPES-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
             +  N L  +P  +GKL K                      LS+L +  N L+ LP  +
Sbjct: 248 LVISQNLLEMIPDGIGKLKK----------------------LSILKVDQNRLTQLPEAV 285

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G   +L +L+LT N L TL  S+        LK L S L  + +   S  KE  I     
Sbjct: 286 GDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCS 336

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L+V      +    L+ +P+E+ +A E+  LD++ N +  LP  L++   L+ L LS N+
Sbjct: 337 LTV----FCVRDNRLTRLPAEVSQATELHVLDVAGNRLLHLPLSLTA-LKLKALWLSDNQ 391



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 150/357 (42%), Gaps = 40/357 (11%)

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  
Sbjct: 37  FLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPE 96

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L
Sbjct: 97  IPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 156

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  L  SL       L +     L  NE      +   L+ +        K+L 
Sbjct: 157 ELRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLW 203

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L+G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I 
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGI- 262

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 483
             L  LS LK+D N L Q+P                                 L EL L 
Sbjct: 263 GKLKKLSILKVDQNRLTQLPE-------------------------AVGDCESLTELVLT 297

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             QL   P  I +L++L  L+  +N L S+P+      SLT   + DN ++ LP E+
Sbjct: 298 ENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEV 354


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 27/240 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K D + ++L  LP  +G+  
Sbjct: 63  NQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQ 122

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
            L       N + +LP+++     +  L + GN+LT L                      
Sbjct: 123 KLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTL---------------------- 160

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ IG+L +L  LDL QN++ ++P  I     L   ++GNN L+ LP E+G L  L  
Sbjct: 161 --PKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQE 218

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L+SNQ      E   L+ L  L+LS NSL+  P EIGK+  L+ L L GNP   LRS 
Sbjct: 219 LNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPF--LRSQ 276



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 127/241 (52%), Gaps = 12/241 (4%)

Query: 34  EAGEGDKWW---EAV----DLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++   EA+    D++ L L      N +  L +++ NL  L  LN++ N+ + 
Sbjct: 31  EADEKDKYYNLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTT 90

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L+ LD++++ +  +P EIG    L K +   NQLK LP  +G+  NL + 
Sbjct: 91  LPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNL 150

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             + N +T+LP+++ +  K+  LD+  N+L  L    I     L  L    N L  +P+ 
Sbjct: 151 SLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKE-IEKLQKLEALHLGNNELTTLPKE 209

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L  L  L+L+ N+  ++P  I    SL    +  N+L++ P E+GKL KL  L L  
Sbjct: 210 IGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGG 269

Query: 263 N 263
           N
Sbjct: 270 N 270



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 36/246 (14%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L+ N+  ++P  I     L +  +  + L+ LP E+GKL 
Sbjct: 63  NQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQ 122

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           KL  L+L+ NQLK                       LP EIGK+  L+ L L GN L TL
Sbjct: 123 KLQKLNLYKNQLKT----------------------LPKEIGKLQNLKNLSLNGNELTTL 160

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              + N     L K     L +N+        E L  +          L L    L+ +P
Sbjct: 161 PKEIGN-----LQKLQTLDLAQNQLKTLPKEIEKLQKLEA--------LHLGNNELTTLP 207

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
            EI     + +L+L+ N    LP E+ +  SL++L LS N +  +P+ I   L  L  L 
Sbjct: 208 KEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEI-GKLQKLKWLY 266

Query: 434 LDNNPL 439
           L  NP 
Sbjct: 267 LGGNPF 272



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 5/182 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           +EL+L     + +P EI    ++ KLDL+ + +  LP E+     LQ L L +N++K  P
Sbjct: 79  QELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLP 138

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I   L +L  L L+ N L  +P +   ++  LQ LDL+ N + +LP+      L  L+
Sbjct: 139 KEI-GKLQNLKNLSLNGNELTTLPKE-IGNLQKLQTLDLAQNQLKTLPKE--IEKLQKLE 194

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L+L   +L   P +I  LQ L+ L+L+ N   ++PE   NL SL  L+LS N++++ P 
Sbjct: 195 ALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPE 254

Query: 539 EL 540
           E+
Sbjct: 255 EI 256



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 108/259 (41%), Gaps = 43/259 (16%)

Query: 277 LSVLDLS----NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           + VLDL      N L+ LP EIG +  L++L L  N   TL   + N      L    SR
Sbjct: 51  VRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSR 110

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           L         TT    I    +L    ++L+L    L  +P EI +   +  L L+ N +
Sbjct: 111 L---------TTLPKEIGKLQKL----QKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNEL 157

Query: 393 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
             LP E+ +   LQTL L++N++K  P  I   L  L  L L NN L  +P +       
Sbjct: 158 TTLPKEIGNLQKLQTLDLAQNQLKTLPKEI-EKLQKLEALHLGNNELTTLPKE------- 209

Query: 453 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
                               +L +LQEL L   Q    P +I  LQ L  L+LS NSL S
Sbjct: 210 ------------------IGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTS 251

Query: 513 IPEGFKNLTSLTELDLSDN 531
            PE    L  L  L L  N
Sbjct: 252 FPEEIGKLQKLKWLYLGGN 270


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 37/377 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S
Sbjct: 3   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 62

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LP+ L   
Sbjct: 63  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 122

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +LD+  N++  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+
Sbjct: 123 RRLEELDLGNNEIYNLPES-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 181

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             +P  ISG  SL +  +  N L  LP  +GKL K                      LS+
Sbjct: 182 ERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK----------------------LSI 219

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + + 
Sbjct: 220 LKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNK 272

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             S  KE  I     L+V      +    L+ IP+E+  A E+  LD++ N +  LP  L
Sbjct: 273 LVSLPKE--IGGCCSLTV----FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSL 326

Query: 400 SSCASLQTLILSRNKIK 416
           ++  +L+ L LS N+ +
Sbjct: 327 TAL-NLKALWLSDNQAQ 342



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 10  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 69

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 70  PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 129

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N +  L  S+      ALL                                 K+L L
Sbjct: 130 LGNNEIYNLPESI-----GALLHL-------------------------------KDLWL 153

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 154 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGI-G 212

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 213 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 269

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP        L  LD++ N +S LP  L ++
Sbjct: 270 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL 329



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LD+SRN I E+P  +S C +LQ    S N + 
Sbjct: 8   VKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLT 67

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       D    +  L+
Sbjct: 68  RLPES-FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 126

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N I +LPE+    +L HL++L+L   QL E P +I  L+ L  LD+S+N L+ +
Sbjct: 127 ELDLGNNEIYNLPES--IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL 184

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  LP
Sbjct: 185 PEEISGLTSLTDLVISQNLLEMLP 208


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPEPIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
            IGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 PIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP  +G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPEPIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 26/273 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT LN+S N+L+++P  IGEL  L  LD+S N++  +P EIG    L   D S NQL +L
Sbjct: 18  LTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSGNQLIQL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS +GR  NL+     +N +T LP ++ +   ++ L +  NKLT                
Sbjct: 78  PSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLT---------------- 121

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                    +P  IG L  L  L ++ N++  +P  I    +L+   +  N L+ LP+E+
Sbjct: 122 --------QIPPEIGKLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEI 173

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L TL L+ NQL E   E  +L  L  L + NN L+ LPPEI ++  L  L L+ N
Sbjct: 174 GNLKNLETLSLYRNQLIELPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSAN 233

Query: 309 PLRTLRSSLVNGPTPALLKYL-RSRLPENEDSE 340
           PL +    +V+    A+  YL +S+  EN +++
Sbjct: 234 PLTSPPPEIVSRGLEAIFTYLNQSKTTENNEAK 266



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 1/220 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N + ++ +++  L  LT+L++S N L+ LP  IGEL  LK+LD+S N +++
Sbjct: 17  NLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSGNQLIQ 76

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL +LP  +    NL+     NN +T +P ++     +  L
Sbjct: 77  LPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNLETL 136

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L+ L  +KN L  +P  IG+L  L  L L++N+++ +P  
Sbjct: 137 YIYCNQLTQLPPE-IGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELPPE 195

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L   Y+ NN L+ LP E+ +L  L TL+L +N L
Sbjct: 196 IGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPL 235



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 122/267 (45%), Gaps = 38/267 (14%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +A    LT L  S N L  +P+ IG L  L  LDL +N +  +P  I    +L    +  
Sbjct: 12  VAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSG 71

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP+E+G+L  L  L+L+ NQL +   E  +L+ L+ L L NN L+ +PPEIGK+ 
Sbjct: 72  NQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLK 131

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L +  N L  L                    PE             I     LS+ 
Sbjct: 132 NLETLYIYCNQLTQLP-------------------PE-------------IGELKNLSI- 158

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
              L+L    L+ +PSEI     +  L L RN + ELPPE+    +L+TL +  NK+   
Sbjct: 159 ---LALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELPPEIGKLENLKTLYIDNNKLTIL 215

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSD 445
           P  I + L +L  L L  NPL   P +
Sbjct: 216 PPEI-SELKNLITLNLSANPLTSPPPE 241



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 63/295 (21%)

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           + K   L  L+L  NQL +   E  +L+ L++LDLS N+L+ LP EIG++  L+ L L+G
Sbjct: 12  VAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSG 71

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L S                                 I     L++    L+L   
Sbjct: 72  NQLIQLPSE--------------------------------IGRLKNLTI----LNLYDN 95

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L+ +P EI E   +T L L  N + ++PPE+    +L+TL +  N++   P  I   L 
Sbjct: 96  QLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNLETLYIYCNQLTQLPPEI-GELK 154

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 487
           +LS L L+ N L Q+PS+                           +L +L+ L L R QL
Sbjct: 155 NLSILALNKNKLTQLPSE-------------------------IGNLKNLETLSLYRNQL 189

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            E P +I +L+ L+ L +  N L  +P     L +L  L+LS N +++ PPE+VS
Sbjct: 190 IELPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPLTSPPPEIVS 244



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 38/271 (14%)

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           S+ +  NL++   S N +T +P+++ +   ++ LD+  N LT+L    I     L  L  
Sbjct: 11  SVAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQE-IGELKNLKTLDL 69

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  IG L  L  L+L+ N++  +P  I    +L    + NN L+ +P E+GK
Sbjct: 70  SGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGK 129

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL ++ NQL +   E  +L+ LS+L L+ N L+ LP EIG +  L  L L     
Sbjct: 130 LKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSL----- 184

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              R+ L+  P P + K                  E+L           K L ++   L+
Sbjct: 185 --YRNQLIELP-PEIGKL-----------------ENL-----------KTLYIDNNKLT 213

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            +P EI E   +  L+LS N +   PPE+ S
Sbjct: 214 ILPPEISELKNLITLNLSANPLTSPPPEIVS 244



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 13  SLNLSNRSLRDVPNEV--YKNF--------------DEAGEGDKWWEAVDLQKLILAHNN 56
           +LNLS   L  VP E+   KN                E GE        +L+ L L+ N 
Sbjct: 20  NLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGE------LKNLKTLDLSGNQ 73

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           + +L  ++  L  LT+LN+  N+L++LP  I EL  L +L +  N + +IP EIG    L
Sbjct: 74  LIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNL 133

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                  NQL +LP  +G   NLS    + N +T LP ++ +   +  L +  N+L  L 
Sbjct: 134 ETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELP 193

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              I     L  L    N L  +P  I  L  LI L+L  N + S P  I
Sbjct: 194 PE-IGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPLTSPPPEI 242


>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
           str. 1051]
          Length = 353

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 162/313 (51%), Gaps = 19/313 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           + + L+ +     L+LS ++L   P E+  +KN               LQKL L+ N + 
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELT 77

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K
Sbjct: 78  VLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEK 137

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +   
Sbjct: 138 LNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGE 197

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+ 
Sbjct: 198 AL-QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLS 256

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++
Sbjct: 257 ENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316

Query: 298 TTLRKLLLTGNPL 310
             L++L L  NPL
Sbjct: 317 KNLQRLELDSNPL 329



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 38/322 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQTLILSRN 413
           +  LP E+    +LQ L L  N
Sbjct: 306 LTNLPKEIGQLKNLQRLELDSN 327



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 20/266 (7%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 335
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V       L+ L+   L  
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQ------LQNLQELSLHS 96

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ +      E L ++        K L L    L  +P E+     + KL+LS N +  +
Sbjct: 97  NKLTNLPKEIEQLKSL--------KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAV 148

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+    +LQ L L  N+I   P  I   L  L  L L+NN  + VP +  + +  LQ 
Sbjct: 149 PKEIGQLKNLQILKLDHNQIVSLPKEI-EGLQELKELILENNRFKNVPGEALQ-LKNLQK 206

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L+LS N + S+P+      L +L++L L R Q+   PT++L+LQ L+ L LS+N   S+P
Sbjct: 207 LNLSENQLVSIPK--EILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLP 264

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           +    L +L  L L +N ++ LP E+
Sbjct: 265 KEIDKLKNLRWLSLKNNRLTTLPKEI 290



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 26/218 (11%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 449
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 450 IPML---QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           I  L   QIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+N L SIP+    L +L +L L  N I+ LP E++ +
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
             N+++ LP  + +L  L+ L +S N    +P EI     L      +N+L  LP  +G+
Sbjct: 233 DRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L  N I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRDLVLDRNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L +  N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSLPED-----LADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S  ++     L +C    ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPNC----EIDFEG 350


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|326490605|dbj|BAJ89970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 982

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 222/476 (46%), Gaps = 50/476 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLN 138
            E+  AIGEL  L+ LD+  N +  +IPDEIG   +L   D S N L  ++P S+ +   
Sbjct: 87  GEISPAIGELKTLQFLDLKGNKLTGQIPDEIGDCVSLKYLDLSFNLLYGDIPFSISKLKQ 146

Query: 139 LSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L D    NN +T  +P  L+    +  LD+  N+LT     LI    +L  L    N L 
Sbjct: 147 LEDLILKNNQLTGPIPSTLSQIPNLKILDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLT 206

Query: 198 G-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +   +  L+ L   D+  N +  +IP SI  C S     +  N +S  +P  +G L +
Sbjct: 207 GTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNKISGEIPYNIGFL-Q 265

Query: 255 LGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           + TL L  N+L     E   L   L+VLDLS N L G +PP +G ++   KL L GN L 
Sbjct: 266 VATLSLQGNRLTGKIPEVIGLMQALAVLDLSENELVGSIPPILGNLSYTGKLYLHGNKL- 324

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  P          PE  +          +T  + L +   EL      +  
Sbjct: 325 -------TGEVP----------PELGN----------MTKLSYLQLNDNEL------VGT 351

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP+E+ +  E+ +L+L+ N ++  +P  +SSC +L    +  N++     A   +L SL+
Sbjct: 352 IPAELGKLEELFELNLANNKLEGPIPTNISSCTALNKFNVYGNRLNGSIPAGFQNLESLT 411

Query: 431 CLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR- 488
            L L +N  +  +PS+    I  L  LDLSYN  S P       L HL +L L +  L  
Sbjct: 412 NLNLSSNNFKGHIPSE-LGHIINLDTLDLSYNEFSGPVPATIGDLEHLLQLNLSKNHLSG 470

Query: 489 EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNN-ISALPPELVS 542
             P +   L+ ++++DLS N++   +PE    L +L  L L++N  +  +P +L +
Sbjct: 471 SVPAEFGNLRSIQVIDLSNNAMSGYLPEELGQLQNLDSLILNNNTLVGEIPAQLAN 526



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 188/435 (43%), Gaps = 78/435 (17%)

Query: 41  WWEAVDLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDV 98
           +W  V LQ L L  N++   L  D+  L  L   +V  N L+  +P +IG     + LD+
Sbjct: 190 YWNEV-LQYLGLRGNSLTGTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDI 248

Query: 99  SFNSI-MKIPDEIGSATALVKFDCSSNQL-KELPSSLG--RCLNLSDFKASNNCITSLPE 154
           S+N I  +IP  IG    +       N+L  ++P  +G  + L + D  + N  + S+P 
Sbjct: 249 SYNKISGEIPYNIG-FLQVATLSLQGNRLTGKIPEVIGLMQALAVLDL-SENELVGSIPP 306

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLD 213
            L + S   KL + GNKLT      + + T L+ L  + N L G +P  +G L  L  L+
Sbjct: 307 ILGNLSYTGKLYLHGNKLTGEVPPELGNMTKLSYLQLNDNELVGTIPAELGKLEELFELN 366

Query: 214 LHQNRILS-IPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L  N++   IP++IS C +L +F   GN    ++PA    L  L  L+L SN  K +   
Sbjct: 367 LANNKLEGPIPTNISSCTALNKFNVYGNRLNGSIPAGFQNLESLTNLNLSSNNFKGH--- 423

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                             +P E+G +  L  L L+ N          +GP PA +  L  
Sbjct: 424 ------------------IPSELGHIINLDTLDLSYNEF--------SGPVPATIGDLEH 457

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L                    +L+++   LS       ++P+E      I  +DLS N+
Sbjct: 458 LL--------------------QLNLSKNHLS------GSVPAEFGNLRSIQVIDLSNNA 491

Query: 392 IQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN------PL----R 440
           +   LP EL    +L +LIL+ N +     A L +  SL+ L L  N      PL     
Sbjct: 492 MSGYLPEELGQLQNLDSLILNNNTLVGEIPAQLANCFSLNILNLSYNNFSGHVPLAKNFS 551

Query: 441 QVPSDGFKDIPMLQI 455
           + P + F   PML++
Sbjct: 552 KFPIESFLGNPMLRV 566


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 126/223 (56%), Gaps = 1/223 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N + +L E L  L  L  L+V  N++S +P+++G+L  L  LD+S N ++
Sbjct: 124 TELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLV 183

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP  +G  TAL + +   N+L ELP+SLG   NLS     +N +T LP +L+  + +  
Sbjct: 184 EIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRW 243

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+LT L       +T LT +    N L  +PET+G L+ L  L L  NR+  +P+
Sbjct: 244 LNLDRNELTELP-PWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPA 302

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           S++G  +L    +G+N L+ LPA +G L  L +L L  N+   
Sbjct: 303 SMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSH 345



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++S    +E+P  +G+L  L  L +S N + ++P+ +G+ +AL +F  + N+L ++
Sbjct: 57  LTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQI 116

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +   L+D    +N +T LPE L    K++ LDV  N+++ + ++L      L+EL
Sbjct: 117 PIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSL-GDLAALSEL 175

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P T+G L+ L  L+L  NR+  +P+S+    +L+   +G+N L+ LPAEL
Sbjct: 176 DLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAEL 235

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L+ L  L+L  N+L E    A     L+ ++L  N L+ LP  +G +T L  L L GN
Sbjct: 236 SGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGN 295

Query: 309 PLRTLRSSLVN 319
            L  L +S+  
Sbjct: 296 RLTELPASMAG 306



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 38/350 (10%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L + H  L  +PA + E   L  LD+S  +  ++PD +G  T L     S N+L+ELP
Sbjct: 35  TSLELGHLSLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELP 94

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SLG    L++F  + N +  +P  +   ++++ L +  NKLT L    +     L  L 
Sbjct: 95  ESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELP-EFLGGLKKLASLD 153

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N ++ +P ++G L+ L  LDL  NR++ IP ++    +L E  +  N L+ LPA LG
Sbjct: 154 VGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLG 213

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L+ L  L L SN+L     E   L  L  L+L  N L+ LPP  G  T L  + L  N 
Sbjct: 214 ELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNR 273

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L                    + LPE              T+    ++TS  LSL G  L
Sbjct: 274 L--------------------TALPE--------------TLGGLTALTS--LSLRGNRL 297

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + +P+ +     +T LDL  N + +LP  +    +L +L L  N+    P
Sbjct: 298 TELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAP 347



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 140/290 (48%), Gaps = 25/290 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           EA  L +L L+     ++ + L +L  LT L++S N+L ELP ++G L  L    ++ N 
Sbjct: 53  EATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNR 112

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + +IP  +   T L       N+L ELP  LG    L+     +N I+++P  L D + +
Sbjct: 113 LAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAAL 172

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S+LD+ GN+L  +   L    T LTEL    N L  +P ++G L+ L  L L  NR+  +
Sbjct: 173 SELDLSGNRLVEIPRTL-GKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRL 231

Query: 223 PSSIS-----------------------GCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+ +S                       G  +L    +G N L+ALP  LG L+ L +L 
Sbjct: 232 PAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLS 291

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  N+L E       L  L+ LDL +N L+ LP  +G +  L  L L GN
Sbjct: 292 LRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGN 341



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 147/343 (42%), Gaps = 46/343 (13%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  +   + L RLDL       +P  +     L    + +N L  LP  LG LS L   
Sbjct: 47  VPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEF 106

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ N+L +  +   QL  L+ L L +N L+ LP  +G +  L  L +  N +  + SSL
Sbjct: 107 VLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSL 166

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G   AL                                   EL L G  L  IP  + 
Sbjct: 167 --GDLAAL----------------------------------SELDLSGNRLVEIPRTLG 190

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           +   +T+L+L  N + ELP  L   A+L  L+L  N++   P A L+ L++L  L LD N
Sbjct: 191 KLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLP-AELSGLTALRWLNLDRN 249

Query: 438 PLRQVP--SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
            L ++P  + GF     L  ++L +N + +LPE      L  L  L LR  +L E P  +
Sbjct: 250 ELTELPPWAGGFT---ALTGINLGFNRLTALPET--LGGLTALTSLSLRGNRLTELPASM 304

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L  L  LDL  N L  +P    +L +LT L L  N  S  P
Sbjct: 305 AGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAP 347



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 7/207 (3%)

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +++DS A    E+LI        TS EL    ++L  +P+ + EA  +T+LDLS  +  E
Sbjct: 12  DDDDSFALEDAEELIAQVIDDGDTSLELG--HLSLPVVPALLAEATALTRLDLSDGTFTE 69

Query: 395 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 454
           +P  L     L  L LS N++++ P++ L +LS+L+   L+ N L Q+P        + +
Sbjct: 70  VPDFLGDLTGLTHLSLSDNRLEELPES-LGNLSALTEFVLNGNRLAQIP---IWVRQLTE 125

Query: 455 ILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
           + DL+     L E P F   L  L  L +   ++   P+ +  L  L  LDLS N L  I
Sbjct: 126 LTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEI 185

Query: 514 PEGFKNLTSLTELDLSDNNISALPPEL 540
           P     LT+LTEL+L  N ++ LP  L
Sbjct: 186 PRTLGKLTALTELNLDFNRLAELPASL 212



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L  L+L  N + +L  +L  L  L  LN+  N+L+ELP   G    L  +++ FN 
Sbjct: 214 ELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNR 273

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ +G  TAL       N+L ELP+S+     L+     +N +T LP  + D   +
Sbjct: 274 LTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPAL 333

Query: 163 SKLDVEGNKLT 173
           + L ++GN+ +
Sbjct: 334 TSLRLDGNRFS 344



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 44/310 (14%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +G+ +L  +PA L + + L  LDL      E       L  L+ L LS+N L  LP  +G
Sbjct: 39  LGHLSLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLG 98

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            ++ L + +L GN L  +         P  ++ L       E ++ +     L  +   L
Sbjct: 99  NLSALTEFVLNGNRLAQI---------PIWVRQL------TELTDLALRDNKLTELPEFL 143

Query: 356 SVTSKELSLE-GMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
               K  SL+ G N +SA+PS + +   +++LDLS N + E+P  L    +L  L L  N
Sbjct: 144 GGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFN 203

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
           ++ + P A L  L++LS L L +N L ++P++                          S 
Sbjct: 204 RLAELP-ASLGELANLSHLLLGSNRLTRLPAE-------------------------LSG 237

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L+ L L R +L E P        L  ++L  N L ++PE    LT+LT L L  N +
Sbjct: 238 LTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRL 297

Query: 534 SALPPELVSV 543
           + LP  +  +
Sbjct: 298 TELPASMAGL 307



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N + +L         LT +N+  N+L+ LP  +G L  L SL +  N + ++
Sbjct: 241 LRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTEL 300

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           P  +   TAL   D   N+L +LP+ +G    L+  +   N  +  P  LAD  ++
Sbjct: 301 PASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPRWLADHERL 356


>gi|1184077|gb|AAC15780.1| Cf-2.2 [Solanum pimpinellifolium]
 gi|60327194|gb|AAX19020.1| Cf-2.2 [Solanum pimpinellifolium]
          Length = 1112

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 251/514 (48%), Gaps = 36/514 (7%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L  N +   + E++  L  LT L++S N L   +PA++G L+ L  L +  N +
Sbjct: 240 NLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQL 299

Query: 104 M-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG   +L     S N L   +P+SLG   NLS     NN ++ S+P  L + +
Sbjct: 300 SGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLN 359

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +S L +  N+L+      + +   L+ L    N L+G +P ++G+L+ L RL L+ N++
Sbjct: 360 NLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQL 419

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR 276
             SIP  I    SL    + NN+++  +PA  G +S L  L L+ NQL     E    LR
Sbjct: 420 SGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLR 479

Query: 277 -LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+VLDLS N+L+G +P   G +  L +L L  N L         G  P  + YLRS   
Sbjct: 480 SLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLS--------GSIPEEIGYLRSLNV 531

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  L LS N
Sbjct: 532 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNDLGLSEN 585

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P  L +  +L  L L  N++       +  LSSL+ L L NN L  +    F +
Sbjct: 586 ALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLNGLIPASFGN 645

Query: 450 IPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLS 506
           +  LQ L L+ N  I  +P +    +L  L+ LY+ R  L+ + P  +  +  L++L +S
Sbjct: 646 MRNLQALILNDNNLIGEIPSS--VCNLTSLEVLYMPRNNLKGKVPQCLGNISNLQVLSMS 703

Query: 507 QNSLQS-IPEGFKNLTSLTELDLSDNNISALPPE 539
            NS    +P    NLTSL  LD   NN+    P+
Sbjct: 704 SNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQ 737



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 239/514 (46%), Gaps = 56/514 (10%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++S N L   +PA++G ++ L  L +  N +
Sbjct: 192 NLSFLYLYNNQLSGSIPEEISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQL 251

Query: 104 M-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EI    +L   D S N L   +P+SLG   NLS  F   N    S+PE++    
Sbjct: 252 SGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLR 311

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            ++ L +  N L       + +   L+ L    N L+G +P ++G+L+ L  L L+ N++
Sbjct: 312 SLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQL 371

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-- 275
             SIP+S+    +L+  Y+ NN LS  +PA LG L+ L  L L++NQL     E      
Sbjct: 372 SGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLS 431

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+ LDLSNNS++G +P   G M+ L  L L  N L +          P  + YLRS   
Sbjct: 432 SLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLAS--------SVPEEIGYLRSLNV 483

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  LDLS N
Sbjct: 484 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNVLDLSEN 537

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P    +  +L  L L  N++       +  L SL+ L L  N L          
Sbjct: 538 ALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALN-------GS 590

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQN 508
           IP           ASL       +L +L  LYL   QL  + P +I  L  L  L L  N
Sbjct: 591 IP-----------ASL------GNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN 633

Query: 509 SLQS-IPEGFKNLTSLTELDLSDNNISALPPELV 541
           SL   IP  F N+ +L  L L+DNN+    P  V
Sbjct: 634 SLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 247/557 (44%), Gaps = 100/557 (17%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L+ NNI   +  ++ NL  L  L++++N++S  +P  IG L  L+ + +  N + 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLN 156

Query: 105 K-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSK 161
             IP EIG   +L K     N L   +P+S+G   NLS     NN ++ S+PE+++    
Sbjct: 157 GFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRS 216

Query: 162 MSKLDVEGNKLT-----------------VLSNNL-------IASWTMLTELIASKNLLN 197
           +++LD+  N L                  +  N L       I     LT L  S+N LN
Sbjct: 217 LTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALN 276

Query: 198 G-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +P ++G+L+ L  L L+ N++  SIP  I    SL    +  NAL+  +PA LG L  
Sbjct: 277 GSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKN 336

Query: 255 LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           L  L+L +NQL      +      LS+L L NN LSG +P  +G +  L  L L  N L 
Sbjct: 337 LSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLS 396

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  PA L  L +                     +RL + + +LS       +
Sbjct: 397 --------GSIPASLGNLNN--------------------LSRLYLYNNQLS------GS 422

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP EI     +T LDLS NSI   +P    + ++L  L L  N++       +  L SL+
Sbjct: 423 IPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLN 482

Query: 431 CLKLDNNPLRQVPSDGF-----------------KDIP-------MLQILDLSYNI--AS 464
            L L  N L       F                   IP        L +LDLS N    S
Sbjct: 483 VLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGS 542

Query: 465 LPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTS 522
           +P +  F +L +L  L L   QL  + P +I  L+ L  L LS+N+L  SIP    NL +
Sbjct: 543 IPAS--FGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNN 600

Query: 523 LTELDLSDNNISALPPE 539
           L+ L L +N +S   PE
Sbjct: 601 LSMLYLYNNQLSGSIPE 617



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 207/471 (43%), Gaps = 56/471 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALV 117
           + E++  L  L  L +S N L   +PA++G L+ L  L +  N +   IP+EIG  ++L 
Sbjct: 567 IPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLT 626

Query: 118 KFDCSSNQLKEL-PSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                +N L  L P+S G   NL     + NN I  +P  + + + +  L +  N L   
Sbjct: 627 YLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGK 686

Query: 176 SNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLA 233
               + + + L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL 
Sbjct: 687 VPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLE 746

Query: 234 EFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG 289
            F M NN LS  LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+ 
Sbjct: 747 VFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLND 805

Query: 290 -LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             P  +G +  LR L LT N L   +RSS      P L     SR   ++D   S   E 
Sbjct: 806 TFPMWLGTLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EH 864

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           L  M T +  T +E S E     ++         +TK          L  E+    SL T
Sbjct: 865 LKGMRT-VDKTMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYT 907

Query: 408 LI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           +I LS NK +    ++L  L ++  L + +N L+         + +L+ LDLS+N  S  
Sbjct: 908 VIDLSSNKFEGHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS-- 965

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 516
                                 E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 ---------------------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 40/182 (21%)

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
           +L     S++PS       +  LDLS+N+I   +PPE+ +  +L  L L+ N+I      
Sbjct: 85  TLYAFPFSSLPS-------LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPP 137

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPH 476
            +  L+ L  +++ +N L     +GF  K+I  L+ L  LS  I  L  + P S  +L +
Sbjct: 138 QIGLLAKLQIIRIFHNQL-----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNN 192

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L  LYL   QL                        SIPE    L SLTELDLSDN ++  
Sbjct: 193 LSFLYLYNNQLS----------------------GSIPEEISYLRSLTELDLSDNALNGS 230

Query: 537 PP 538
            P
Sbjct: 231 IP 232


>gi|348553815|ref|XP_003462721.1| PREDICTED: protein LAP2-like isoform 1 [Cavia porcellus]
          Length = 1455

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 194

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  L+ IP  I    ++T LD
Sbjct: 195 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 146/267 (54%), Gaps = 2/267 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L +    +++L E++  L  L +L +S +KL+ LP +IG+L  LK LD++   
Sbjct: 70  EFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGK 129

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++ +P EIG+ T L K     NQL ELP  +G+  NL     + N +  LP+++    K+
Sbjct: 130 LISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKL 189

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           + L + GNKL  L  + I +   L  L    N L G+P+ I  L+ L  L L  N++ ++
Sbjct: 190 ALLYLGGNKLECLPKS-IGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTAL 248

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ I G   L +  + +N L  LP E+G+L  L  L+L +N+L+    E  QL  L   D
Sbjct: 249 PAGIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFD 308

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L NN L  LP EIG++  L+KL L  N
Sbjct: 309 LENNRLRNLPEEIGQLANLQKLYLEHN 335



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 41  WWEAV-----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           W +A+      L+ ++L ++++  L   +     L  L +   +L ELP  IGEL  L+ 
Sbjct: 40  WQDALVHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEI 99

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L +S + +  +P  IG    L   D +  +L  LP  +G   NL   +   N +  LP++
Sbjct: 100 LTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKE 159

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +     +  L + GN+L  L    I S   L  L    N L  +P++IG+L  L  L L 
Sbjct: 160 IGQLKNLISLTLNGNQLVELPQE-IGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLG 218

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N +  +P  I    +L   Y+ NN L+ALPA +G L KL  + L  N+L++   E  QL
Sbjct: 219 YNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQL 278

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L  L+L NN L  LP EI ++T+LR+  L  N LR L
Sbjct: 279 GNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNL 317



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 1/206 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ NL  L  L V  N+L ELP  IG+L  L SL ++ N ++++P EIGS   L   
Sbjct: 133 LPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALL 192

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               N+L+ LP S+G    L       N +  LP+++   + +  L +E N+LT L    
Sbjct: 193 YLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAG- 251

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L ++    N L  +P+ IG L  L  L+L  NR+  +P  I    SL EF + N
Sbjct: 252 IGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLEN 311

Query: 240 NALSALPAELGKLSKLGTLDLHSNQL 265
           N L  LP E+G+L+ L  L L  N+ 
Sbjct: 312 NRLRNLPEEIGQLANLQKLYLEHNRF 337



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 143/307 (46%), Gaps = 19/307 (6%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S +  + +  + LTVLS+  IA +  L  L      L  +PE IG L  L  L L  +++
Sbjct: 49  SGLKSMVLRNDSLTVLSSR-IAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKL 107

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P SI     L    +    L +LP E+G L+ L  L +  NQL E   E  QL+ L 
Sbjct: 108 TSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLI 167

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE 337
            L L+ N L  LP EIG +  L  L L GN L  L  S+ N      L+ L S  L  N 
Sbjct: 168 SLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGN------LRELESLHLGYNN 221

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                   + L  +          L LE   L+A+P+ I    ++ K+ L  N +++LP 
Sbjct: 222 LKGLPDEIQQLTNLGW--------LYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPK 273

Query: 398 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 457
           E+    +LQ L L  N+++  P+ I   L+SL    L+NN LR +P +    +  LQ L 
Sbjct: 274 EIGQLGNLQELNLKNNRLRRLPEEI-DQLTSLREFDLENNRLRNLPEE-IGQLANLQKLY 331

Query: 458 LSYNIAS 464
           L +N  S
Sbjct: 332 LEHNRFS 338



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 139/340 (40%), Gaps = 67/340 (19%)

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           + S++ L      ++ L  L S +    +L         +  LPE++ +   +  L + G
Sbjct: 45  VHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSG 104

Query: 170 NKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETIGSLS 207
           +KLT L  ++                      I + T L +L    N L  +P+ IG L 
Sbjct: 105 SKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLK 164

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            LI L L+ N+++ +P  I     LA  Y+G N L  LP  +G L +L +L L  N LK 
Sbjct: 165 NLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKG 224

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  QL  L  L L NN L+ LP  IG +  L+K+ L  N LR               
Sbjct: 225 LPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLR--------------- 269

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                +LP+      +                 +EL+L+   L  +P EI +   + + D
Sbjct: 270 -----KLPKEIGQLGNL----------------QELNLKNNRLRRLPEEIDQLTSLREFD 308

Query: 387 LSRNSIQELPPELSSCASLQTLILSRN--------KIKDW 418
           L  N ++ LP E+   A+LQ L L  N        KI+ W
Sbjct: 309 LENNRLRNLPEEIGQLANLQKLYLEHNRFSKAKQRKIRQW 348



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 19/311 (6%)

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +     L    + N++L+ L + + +   L  L +   QLKE   E  +L  L +L LS 
Sbjct: 45  VHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSG 104

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           + L+ LP  IGK+  L+ L L    L +L   + N     L    + R+  N+  E    
Sbjct: 105 SKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGN-----LTNLYKLRVGLNQLVELPKE 159

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              L  + +        L+L G  L  +P EI   G++  L L  N ++ LP  + +   
Sbjct: 160 IGQLKNLIS--------LTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRE 211

Query: 405 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
           L++L L  N +K  PD I   L++L  L L+NN L  +P+ G   +  L+ + L  N + 
Sbjct: 212 LESLHLGYNNLKGLPDEI-QQLTNLGWLYLENNQLTALPA-GIGGLKKLKKMGLQDNRLR 269

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            LP+      L +LQEL L+  +LR  P +I +L  LR  DL  N L+++PE    L +L
Sbjct: 270 KLPKE--IGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQLANL 327

Query: 524 TELDLSDNNIS 534
            +L L  N  S
Sbjct: 328 QKLYLEHNRFS 338



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 78/138 (56%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +NN++ L ++++ L  L  L + +N+L+ LPA IG L  LK + +  N + K
Sbjct: 211 ELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRK 270

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + +  +N+L+ LP  + +  +L +F   NN + +LPE++   + + KL
Sbjct: 271 LPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQLANLQKL 330

Query: 166 DVEGNKLTVLSNNLIASW 183
            +E N+ +      I  W
Sbjct: 331 YLEHNRFSKAKQRKIRQW 348



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 13/135 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L   +L+ +P+E+              +  +L  L L +N +  L   +  L  L  
Sbjct: 214 SLHLGYNNLKGLPDEIQ-------------QLTNLGWLYLENNQLTALPAGIGGLKKLKK 260

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           + +  N+L +LP  IG+L  L+ L++  N + ++P+EI   T+L +FD  +N+L+ LP  
Sbjct: 261 MGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEE 320

Query: 133 LGRCLNLSDFKASNN 147
           +G+  NL      +N
Sbjct: 321 IGQLANLQKLYLEHN 335


>gi|60327196|gb|AAX19021.1| Cf-2.3 [Solanum pimpinellifolium]
          Length = 1112

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 251/514 (48%), Gaps = 36/514 (7%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L  N +   + E++  L  LT L++S N L   +PA++G L+ L  L +  N +
Sbjct: 240 NLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQL 299

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG   +L     S N L   +P+SLG   NLS     NN ++ S+P  L + +
Sbjct: 300 SGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLN 359

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +S L +  N+L+      + +   L+ L    N L+G +P ++G+L+ L RL L+ N++
Sbjct: 360 NLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQL 419

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR 276
             SIP  I    SL    + NN+++  +PA  G +S L  L L+ NQL     E    LR
Sbjct: 420 SGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLR 479

Query: 277 -LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+VLDLS N+L+G +P   G +  L +L L  N L         G  P  + YLRS   
Sbjct: 480 SLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLS--------GSIPEEIGYLRSLNV 531

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  L LS N
Sbjct: 532 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNDLGLSEN 585

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P  L +  +L  L L  N++       +  LSSL+ L L NN L  +    F +
Sbjct: 586 ALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLNGLIPASFGN 645

Query: 450 IPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLS 506
           +  LQ L L+ N  I  +P +    +L  L+ LY+ R  L+ + P  +  +  L++L +S
Sbjct: 646 MRNLQALILNDNNLIGEIPSS--VCNLTSLEVLYMPRNNLKGKVPQCLGNISNLQVLSMS 703

Query: 507 QNSLQS-IPEGFKNLTSLTELDLSDNNISALPPE 539
            NS    +P    NLTSL  LD   NN+    P+
Sbjct: 704 SNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQ 737



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 239/514 (46%), Gaps = 56/514 (10%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++S N L   +PA++G ++ L  L +  N +
Sbjct: 192 NLSFLYLYNNQLSGSIPEEISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQL 251

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EI    +L   D S N L   +P+SLG   NLS  F   N    S+PE++    
Sbjct: 252 SGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLR 311

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            ++ L +  N L       + +   L+ L    N L+G +P ++G+L+ L  L L+ N++
Sbjct: 312 SLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQL 371

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-- 275
             SIP+S+    +L+  Y+ NN LS  +PA LG L+ L  L L++NQL     E      
Sbjct: 372 SGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLS 431

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+ LDLSNNS++G +P   G M+ L  L L  N L +          P  + YLRS   
Sbjct: 432 SLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLAS--------SVPEEIGYLRSLNV 483

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  LDLS N
Sbjct: 484 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNVLDLSEN 537

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P    +  +L  L L  N++       +  L SL+ L L  N L          
Sbjct: 538 ALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALN-------GS 590

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQN 508
           IP           ASL       +L +L  LYL   QL  + P +I  L  L  L L  N
Sbjct: 591 IP-----------ASL------GNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN 633

Query: 509 SLQS-IPEGFKNLTSLTELDLSDNNISALPPELV 541
           SL   IP  F N+ +L  L L+DNN+    P  V
Sbjct: 634 SLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 247/557 (44%), Gaps = 100/557 (17%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L+ NNI   +  ++ NL  L  L++++N++S  +P  IG L  L+ + +  N + 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLN 156

Query: 105 K-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSK 161
             IP EIG   +L K     N L   +P+S+G   NLS     NN ++ S+PE+++    
Sbjct: 157 GFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRS 216

Query: 162 MSKLDVEGNKLT-----------------VLSNNL-------IASWTMLTELIASKNLLN 197
           +++LD+  N L                  +  N L       I     LT L  S+N LN
Sbjct: 217 LTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALN 276

Query: 198 G-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +P ++G+L+ L  L L+ N++  SIP  I    SL    +  NAL+  +PA LG L  
Sbjct: 277 GSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKN 336

Query: 255 LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           L  L+L +NQL      +      LS+L L NN LSG +P  +G +  L  L L  N L 
Sbjct: 337 LSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLS 396

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  PA L  L +                     +RL + + +LS       +
Sbjct: 397 --------GSIPASLGNLNN--------------------LSRLYLYNNQLS------GS 422

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP EI     +T LDLS NSI   +P    + ++L  L L  N++       +  L SL+
Sbjct: 423 IPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLN 482

Query: 431 CLKLDNNPLRQVPSDGF-----------------KDIP-------MLQILDLSYNI--AS 464
            L L  N L       F                   IP        L +LDLS N    S
Sbjct: 483 VLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGS 542

Query: 465 LPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTS 522
           +P +  F +L +L  L L   QL  + P +I  L+ L  L LS+N+L  SIP    NL +
Sbjct: 543 IPAS--FGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNN 600

Query: 523 LTELDLSDNNISALPPE 539
           L+ L L +N +S   PE
Sbjct: 601 LSMLYLYNNQLSGSIPE 617



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 207/471 (43%), Gaps = 56/471 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALV 117
           + E++  L  L  L +S N L   +PA++G L+ L  L +  N +   IP+EIG  ++L 
Sbjct: 567 IPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLT 626

Query: 118 KFDCSSNQLKEL-PSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                +N L  L P+S G   NL     + NN I  +P  + + + +  L +  N L   
Sbjct: 627 YLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGK 686

Query: 176 SNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLA 233
               + + + L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL 
Sbjct: 687 VPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLE 746

Query: 234 EFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG 289
            F M NN LS  LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+ 
Sbjct: 747 VFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLND 805

Query: 290 -LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             P  +G +  LR L LT N L   +RSS      P L     SR   ++D   S   E 
Sbjct: 806 TFPMWLGTLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EH 864

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           L  M T +  T +E S E     ++         +TK          L  E+    SL T
Sbjct: 865 LKGMRT-VDKTMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYT 907

Query: 408 LI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           +I LS NK +    ++L  L ++  L + +N L+         + +L+ LDLS+N  S  
Sbjct: 908 VIDLSSNKFEGHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS-- 965

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 516
                                 E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 ---------------------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 40/182 (21%)

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
           +L     S++PS       +  LDLS+N+I   +PPE+ +  +L  L L+ N+I      
Sbjct: 85  TLYAFPFSSLPS-------LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPP 137

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPH 476
            +  L+ L  +++ +N L     +GF  K+I  L+ L  LS  I  L  + P S  +L +
Sbjct: 138 QIGLLAKLQIIRIFHNQL-----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNN 192

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L  LYL   QL                        SIPE    L SLTELDLSDN ++  
Sbjct: 193 LSFLYLYNNQLS----------------------GSIPEEISYLRSLTELDLSDNALNGS 230

Query: 537 PP 538
            P
Sbjct: 231 IP 232


>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 354

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 19/313 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           + + L+ +     L+LS ++L   P E+  +KN               LQKL L+ N + 
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELT 77

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K
Sbjct: 78  VLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEK 137

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +   
Sbjct: 138 LNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGE 197

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L +L  S+N L  +P+ I  L  L  L L  N+I  +P+ +    +L E Y+ 
Sbjct: 198 AL-QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLS 256

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++
Sbjct: 257 ENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316

Query: 298 TTLRKLLLTGNPL 310
             L++L L  NPL
Sbjct: 317 KNLQRLELDSNPL 329



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 38/322 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L +N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   LS +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLSTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQTLILSRN 413
           +  LP E+    +LQ L L  N
Sbjct: 306 LTNLPKEIGQLKNLQRLELDSN 327



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRL 333
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V   N    +L     + L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITK 384
           P+  +   S    DL     +L    KE+    +LE +NLS     A+P EI +   +  
Sbjct: 103 PKEIEQLKSLKNLDL--FRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQI 160

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P 
Sbjct: 161 LKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIPK 219

Query: 445 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
           +  + +  L+ L L +N I  LP       L +LQELYL   Q    P +I +L+ LR L
Sbjct: 220 EILQ-LQNLRDLVLDHNQITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWL 276

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L  N L ++P+    L +L  L+L +N ++ LP E+
Sbjct: 277 SLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEI 313



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 26/218 (11%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 449
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 450 IPML---QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           I  L   QIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+N L SIP+    L +L +L L  N I+ LP E++ +
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQL 247



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
            HN+++ LP  + +L  L+ L +S N    +P EI     L      +N+L  LP  +G+
Sbjct: 233 DHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L HN I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRDLVLDHNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L +  N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S   E +       ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPKCEIDFEG 350


>gi|348553825|ref|XP_003462726.1| PREDICTED: protein LAP2-like isoform 6 [Cavia porcellus]
          Length = 1418

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                     +S+  +EL     
Sbjct: 286 NQLMYLPDSI----------------------------------GGLMSI--EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A                    NLI     L EL  SKN +   PE I + 
Sbjct: 79  NDLTALPASIA--------------------NLIN----LRELDVSKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 194

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  L+ IP  I    ++T LD
Sbjct: 195 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLMSIEELDCSFNEIEALPSS--IGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+ +PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLELLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
             L  + L+ N  + L    + S        L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQPRTED 435



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R  G ++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RWHRHVGGIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H+  +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVGGIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|351715294|gb|EHB18213.1| hypothetical protein GW7_20513, partial [Heterocephalus glaber]
          Length = 863

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 248/560 (44%), Gaps = 68/560 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK----EDLRNLPL 69
           LN+S+  +  +P E+                 ++++L L  + IE       E LRNL  
Sbjct: 220 LNVSHNQISHIPKEI-------------LHLGNIRQLFLNDSYIENFPSPGIESLRNLE- 265

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
             +L++S NKL  +P  +  L  L+ LD+ +N +   P  +     L+  + + N +  L
Sbjct: 266 --ILSLSKNKLRHIPNTLPNLQNLRILDLEYNKLTIFPKALCFLPKLISLNLTGNMIGSL 323

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P  +    +L +    +N +T L  ++   +K+ +L +  NKL V+S+ +          
Sbjct: 324 PKEIRELKSLENLLLDHNKLTFLAVEIFQLNKIKELQLTDNKLEVISHKIENFKELRILT 383

Query: 180 ------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       I+   ML  L  S N L  +P+ I  L  L +L +++N ++ I   IS
Sbjct: 384 LDKNLAKKIPERISYCVMLERLSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITEDIS 443

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
              ++       N +  +P E+    KL  ++L+ N+++++ V  C L  L  L  + NS
Sbjct: 444 HLNNICSLEFSGNIIKNIPIEIKNCRKLTKVELNYNKIQQFPVGLCALDSLYYLSFNGNS 503

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +S +P ++     L  L L  N L        SL+N      LK+L   L +N+  +   
Sbjct: 504 ISEIPVDVSFSKQLVHLELNENKLTVFPDHLCSLIN------LKFL--NLGKNQTRKIPP 555

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           +  +++++   +   +K            P E+    ++  LD+S N +  +P E+ +  
Sbjct: 556 SISNMVSLHVLILCCNK--------FETFPRELCILEKLQVLDISENQLWTIPSEICNLK 607

Query: 404 SLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            +Q L  S N+   +P  +  L SL  L   + +   L ++P +   ++  L+ LD+S N
Sbjct: 608 GVQKLNFSSNQFIHFPTELCQLQSLEELDISQSNGTKLTRLPEE-LSNMTQLKKLDISNN 666

Query: 462 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 520
            I  +P N     L  L   Y    Q+   P   L L++L+ L LS N+L ++P    NL
Sbjct: 667 AIKEIPRN--IGELRSLVSFYAYNNQISYLPLSFLTLKELQQLSLSGNNLTALPSAIHNL 724

Query: 521 TSLTELDLSDNNISALPPEL 540
            SL E++  DN +   P E+
Sbjct: 725 VSLKEINFDDNPLLTPPMEI 744



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 259/565 (45%), Gaps = 56/565 (9%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGE--GDKW---WEAVDLQK-------------LILAHNNI 57
           LS+ S+R V  +V + + E  +   D +    EA  LQ+             L L +N I
Sbjct: 121 LSHESVRKVNAQVSEEYREGFDLGSDNFTVNLEAKGLQEFPKDSLKVKHVKYLYLDNNKI 180

Query: 58  EKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           +  +  DL +L  L ++++  N+LS LP  I   H L+ L+VS N I  IP EI     +
Sbjct: 181 KTFQGADLNDLLGLEIISLRDNELSSLPCEILLFHNLRILNVSHNQISHIPKEILHLGNI 240

Query: 117 VKFDCSSNQLKELPS-SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            +   + + ++  PS  +    NL     S N +  +P  L +   +  LD+E NKLT+ 
Sbjct: 241 RQLFLNDSYIENFPSPGIESLRNLEILSLSKNKLRHIPNTLPNLQNLRILDLEYNKLTIF 300

Query: 176 SNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
                 +   L +LI+   + N++  +P+ I  L  L  L L  N++  +   I     +
Sbjct: 301 P----KALCFLPKLISLNLTGNMIGSLPKEIRELKSLENLLLDHNKLTFLAVEIFQLNKI 356

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVEACQLRLSVLDLSNNS 286
            E  + +N L  +  ++    +L  L L  N  K+      YCV      L  L LS+N 
Sbjct: 357 KELQLTDNKLEVISHKIENFKELRILTLDKNLAKKIPERISYCV-----MLERLSLSDNK 411

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENEDSEAST 343
           L  LP  I K+  LRKL +  N +  +   + +      L++   +   +P    +    
Sbjct: 412 LIELPKNIYKLKNLRKLHVNRNYMVRITEDISHLNNICSLEFSGNIIKNIPIEIKNCRKL 471

Query: 344 TKEDL-ITMATRLSV------TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           TK +L      +  V      +   LS  G ++S IP ++  + ++  L+L+ N +   P
Sbjct: 472 TKVELNYNKIQQFPVGLCALDSLYYLSFNGNSISEIPVDVSFSKQLVHLELNENKLTVFP 531

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
             L S  +L+ L L +N+ +  P +I +++ SL  L L  N     P +    +  LQ+L
Sbjct: 532 DHLCSLINLKFLNLGKNQTRKIPPSI-SNMVSLHVLILCCNKFETFPRE-LCILEKLQVL 589

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS---LQS 512
           D+S N + ++P      +L  +Q+L     Q    PT++ +LQ L  LD+SQ++   L  
Sbjct: 590 DISENQLWTIP--SEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDISQSNGTKLTR 647

Query: 513 IPEGFKNLTSLTELDLSDNNISALP 537
           +PE   N+T L +LD+S+N I  +P
Sbjct: 648 LPEELSNMTQLKKLDISNNAIKEIP 672



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 18/387 (4%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            V L++L L+ N + +L +++  L  L  L+V+ N +  +   I  L+ + SL+ S N I
Sbjct: 399 CVMLERLSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITEDISHLNNICSLEFSGNII 458

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IP EI +   L K + + N++++ P  L    +L     + N I+ +P D++   ++ 
Sbjct: 459 KNIPIEIKNCRKLTKVELNYNKIQQFPVGLCALDSLYYLSFNGNSISEIPVDVSFSKQLV 518

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L++  NKLTV  ++L  S   L  L   KN    +P +I ++  L  L L  N+  + P
Sbjct: 519 HLELNENKLTVFPDHL-CSLINLKFLNLGKNQTRKIPPSISNMVSLHVLILCCNKFETFP 577

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             +     L    +  N L  +P+E+  L  +  L+  SNQ   +  E CQL+ L  LD+
Sbjct: 578 RELCILEKLQVLDISENQLWTIPSEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDI 637

Query: 283 SNNS---LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           S ++   L+ LP E+  MT L+KL ++ N ++ +  ++  G   +L+ +         ++
Sbjct: 638 SQSNGTKLTRLPEELSNMTQLKKLDISNNAIKEIPRNI--GELRSLVSFYAY------NN 689

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           + S      +T+        ++LSL G NL+A+PS I     + +++   N +   P E+
Sbjct: 690 QISYLPLSFLTLKEL-----QQLSLSGNNLTALPSAIHNLVSLKEINFDDNPLLTPPMEI 744

Query: 400 SSCASLQTLILSRNKIKDWPDAILTSL 426
                L T+     +  +  + IL  +
Sbjct: 745 CEGKQLYTIACYLQRADERDEKILEKI 771


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 70/433 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   +++  + SL  VP+EVY+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVETIDRRHCSLLYVPDEVYR------------YARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  LP  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLEMLPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+  A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTA-L 380

Query: 404 SLQTLILSRNKIK 416
           +L+ L LS N+ +
Sbjct: 381 NLKALWLSDNQAQ 393



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP        L  LD++ N +S LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL 380



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD +     SL  L LD N LR++P   F+ +  L+ L LS N I  LP  P  ++   L
Sbjct: 28  PDEVYRYARSLEELLLDANQLRELPEQFFQ-LVKLRKLGLSDNEIQRLP--PEIANFMQL 84

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + E P  I   + L+I D S N L  +PE F  L +LT L ++D ++ +LP
Sbjct: 85  VELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLP 144



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P ++ R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|431907791|gb|ELK11398.1| Protein LAP2 [Pteropus alecto]
          Length = 1479

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 78  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 125

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 126 LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 185

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +     K+  L++  N+L +L              
Sbjct: 186 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLIKLQILELRENQLKML-------------- 231

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 232 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 281

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 282 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 340

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 341 NQLMFLPDSIGG----------------------------LISI--------EELDCSFN 364

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 365 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDME 423

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 424 KLKVINLSDNRLKNLP 439



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 74  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 133

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 134 NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 169

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L              
Sbjct: 170 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRL-------------- 215

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 216 --------IKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 258

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 259 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 291

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 292 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMFLP-DS 349

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +++        L++ P +I   + + +L L
Sbjct: 350 IGGLISIEELDCSFNEVEALPSS--VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFL 407

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 408 HSNKLETLPEEMGDMEKLKVINLSDNRLKNLP 439



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 147 INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 206

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 207 FLPANFGRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 266

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 267 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 325

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 326 TIGSLKNVTTLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAAD 385

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 386 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMEKLKVINLSDNRLKNLPFSFTKL 445

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 446 QQLTAMWLSDN 456



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 241 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMV 300

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 301 EEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMFLPDSIGGLISIEELD 360

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ +   T +    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 361 CSFNEVEALPSS-VGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 419

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 420 GDMEKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 459



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 24/245 (9%)

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           KMTT R L +   P R LR       T   L Y    L +          +++ T    L
Sbjct: 55  KMTTKRSLFVRLVPCRCLRGEEE---TVTTLDYSHCSLEQ--------VPKEIFTFEKTL 103

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I
Sbjct: 104 ----EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGI 159

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFS 472
           +++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F 
Sbjct: 160 QEFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FG 213

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N 
Sbjct: 214 RLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNR 273

Query: 533 ISALP 537
           ++ +P
Sbjct: 274 LTFIP 278


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N I   P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P  IG L +L+ LD+ +NRI SI   ISGC 
Sbjct: 195 EFSELP-EVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L +L TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 314 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 343

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +    L  L 
Sbjct: 344 --CKNVTV----MSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALW 397

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 398 LSDNQSK 404



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  LK L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    +++ 
Sbjct: 221 TLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LTVL  N I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTVLP-NAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK   +   +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 202/474 (42%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP  +A    + +LD+                        SKN +   PE I   
Sbjct: 79  NDLSSLPTSIASLVNLKELDI------------------------SKNGIQDFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+T L +L L GN                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLTQLERLDL-GN------------------ 193

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                    NE SE     E +  +        KEL ++   L  +P  I    ++  LD
Sbjct: 194 ---------NEFSELPEVLEQIQNL--------KELWMDNNALQTLPGPIGRLKQLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 237 VSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKRLTTLKVDDNQLTVLP-NA 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 355 NKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLSDNQSKALIP 408



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 135/341 (39%), Gaps = 107/341 (31%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQ+ P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQDFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 485
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSI-------------------------------- 513
            L+  P  I RL+QL  LD+S+N ++SI                                
Sbjct: 218 ALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKR 277

Query: 514 --------------PEGFKNLTSLTELDLSDNNISALPPEL 540
                         P    NL+ L E D S N + +LPP +
Sbjct: 278 LTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPPTI 318


>gi|149029064|gb|EDL84358.1| rCG63088 [Rattus norvegicus]
          Length = 635

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 219/483 (45%), Gaps = 57/483 (11%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N LS +P  I   H LK L+ S+N I  IP E+     + +   +SN ++ L
Sbjct: 186 LETLSLQENGLSSIPQEIQLFHNLKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESL 245

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS L     L       N +T +P+ L     +  L++E N+LT+ S +L      L  L
Sbjct: 246 PSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSL-CFLPKLVSL 304

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N++  +P+ +  L  L  L ++ N++  +   I     + E ++ +N L A+  ++
Sbjct: 305 NLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKI 364

Query: 250 GKLSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
               +L  L+L +N L+       +CV      L  L LS+N+L  LP +I K+  LR+L
Sbjct: 365 ENFKELRLLNLDNNLLQSLPKKISHCV-----NLESLTLSDNNLEELPKKIRKLKNLRQL 419

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                                                    +  +I MA  +S  SK  S
Sbjct: 420 --------------------------------------HANRNKMIKMAEEISHLSKIHS 441

Query: 364 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 421
           LE  G  ++ +P EI    EIT+++L+ N+I   P  L +  SL  L  + N I + P  
Sbjct: 442 LEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIP-V 500

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 480
            L+    L  L+L+ N +  + S+    +  L+ LDL+ N I  +P     S++  L  L
Sbjct: 501 DLSFSKQLLHLELNKNKIT-IFSEHLCSLTNLEYLDLAKNQIRKIPH--CISAMLSLHVL 557

Query: 481 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L   +    P ++  L+ L++LD+S+N L  IP     L  + +L+LS+NN +  P EL
Sbjct: 558 ILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAEL 617

Query: 541 VSV 543
             +
Sbjct: 618 CQL 620



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 25/265 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NN+E+L + +R L  L  L+ + NK+ ++   I  L  + SL+ S
Sbjct: 386 KISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFS 445

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P DL+  
Sbjct: 446 GNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFS 505

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NK+T+ S                        E + SL+ L  LDL +N+I
Sbjct: 506 KQLLHLELNKNKITIFS------------------------EHLCSLTNLEYLDLAKNQI 541

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP  IS   SL    + +N     P EL  L  L  LD+  NQL +   E  +L ++ 
Sbjct: 542 RKIPHCISAMLSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQ 601

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKL 303
            L+LSNN+ +  P E+ ++ TL  L
Sbjct: 602 KLNLSNNNFTHFPAELCQLQTLEDL 626



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 218/524 (41%), Gaps = 91/524 (17%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE------- 82
           K F  A  GD     + L+ L L  N +  + ++++    L VLN S+N++S        
Sbjct: 173 KTFQGADPGD----LLGLETLSLQENGLSSIPQEIQLFHNLKVLNASYNEISHIPKELLQ 228

Query: 83  ----------------LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                           LP+ +  L  L++L +  N +  IPD +     L   +   NQL
Sbjct: 229 LGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQL 288

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
                SL     L     + N I SLP+++ +   +  L +  NKLT L+   I     +
Sbjct: 289 TIFSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVE-IFQLLKI 347

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL  + N L  +   I +   L  L+L  N + S+P  IS C +L    + +N L  LP
Sbjct: 348 KELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELP 407

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            ++ KL  L  L  + N++ +   E   L ++  L+ S N ++ +P EI     + ++ L
Sbjct: 408 KKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIEIKNCKEITRVEL 467

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +            P  L  L+S                              LS  
Sbjct: 468 NYNNIMYF---------PVGLCALQSL---------------------------DYLSFN 491

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
           G  +S IP ++  + ++  L+L++N I      L S  +L+ L L++N+I+  P  I ++
Sbjct: 492 GNYISEIPVDLSFSKQLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCI-SA 550

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           + SL  L L +N     P +    +  LQ+LD+S N                        
Sbjct: 551 MLSLHVLILSDNKFEIFPKE-LCSLKNLQLLDISEN------------------------ 585

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
           QL + P++I +L++++ L+LS N+    P     L +L +L++S
Sbjct: 586 QLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNIS 629



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 206/466 (44%), Gaps = 37/466 (7%)

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP-EDLA 157
           +FN   K  D + S T  V  D     L+E P  + +   +       N I +    D  
Sbjct: 125 TFNGHHKGFD-MESDTFTVHLDAKG--LQEFPVDIVKVKYVKYLYLDKNQIKTFQGADPG 181

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D   +  L ++ N L+ +    I  +  L  L AS N ++ +P+ +  L  + +L L+ N
Sbjct: 182 DLLGLETLSLQENGLSSIPQE-IQLFHNLKVLNASYNEISHIPKELLQLGNMRQLFLNSN 240

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
            I S+PS +     L    +G N L+ +P  L  L  L TL+L  NQL  +    C L +
Sbjct: 241 HIESLPSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPK 300

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L+L+ N +  LP E+ ++  L  LL+  N L  L   +       LLK     L +N
Sbjct: 301 LVSLNLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIF-----QLLKIKELHLADN 355

Query: 337 EDSEASTTKEDL-------------ITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGE 381
           +    S   E+               ++  ++S  V  + L+L   NL  +P +I +   
Sbjct: 356 KLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKKIRKLKN 415

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + +L  +RN + ++  E+S  + + +L  S N+I   P  I  +   ++ ++L+ N +  
Sbjct: 416 LRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIEI-KNCKEITRVELNYNNIMY 474

Query: 442 VPSDGFKDIPMLQILD-LSYN---IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
            P      +  LQ LD LS+N   I+ +P +  FS    L  L L + ++      +  L
Sbjct: 475 FPVG----LCALQSLDYLSFNGNYISEIPVDLSFSK--QLLHLELNKNKITIFSEHLCSL 528

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
             L  LDL++N ++ IP     + SL  L LSDN     P EL S+
Sbjct: 529 TNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFPKELCSL 574



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 198/464 (42%), Gaps = 66/464 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++++L L  N+IE L   L NL  L  L++  N+L+ +P ++  L  LK+L++ +N +  
Sbjct: 231 NMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTI 290

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
               +     LV  + + N +  LP  +    NL +   ++N +T L  ++    K+ +L
Sbjct: 291 FSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKEL 350

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKL  +S   I ++  L  L    NLL  +P+ I     L  L L  N +  +P  
Sbjct: 351 HLADNKLEAISPK-IENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKK 409

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLS 283
           I    +L + +   N +  +  E+  LSK+ +L+   NQ+    +E   C+  ++ ++L+
Sbjct: 410 IRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIEIKNCK-EITRVELN 468

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N++   P  +  + +L  L   GN +  +         P  L + +  L          
Sbjct: 469 YNNIMYFPVGLCALQSLDYLSFNGNYISEI---------PVDLSFSKQLL---------- 509

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                             L L    ++     +     +  LDL++N I+++P  +S+  
Sbjct: 510 -----------------HLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAML 552

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 463
           SL  LILS NK + +P   L SL +L  L +  N L ++PS+                  
Sbjct: 553 SLHVLILSDNKFEIFPKE-LCSLKNLQLLDISENQLHKIPSE------------------ 593

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
                   S L  +Q+L L        P ++ +LQ L  L++SQ
Sbjct: 594 -------ISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNISQ 630



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 164/401 (40%), Gaps = 74/401 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL+   +  +P EV              E  +L+ L++ HN +  L  ++  L  +  
Sbjct: 303 SLNLTGNMIGSLPKEV-------------RELKNLENLLMNHNKLTFLAVEIFQLLKIKE 349

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ NKL  +   I     L+ L++  N +  +P +I     L     S N L+ELP  
Sbjct: 350 LHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKK 409

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL    A+ N +  + E+++  SK+  L+  GN++T                   
Sbjct: 410 IRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQIT------------------- 450

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +P  I +   + R++L+ N I+  P  +    SL       N +S +P +L   
Sbjct: 451 -----HVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFS 505

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L+L+ N++  +    C L  L  LDL+ N +  +P  I  M +L  L+L+ N   
Sbjct: 506 KQLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFE 565

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                L +     LL      + EN+                               L  
Sbjct: 566 IFPKELCSLKNLQLLD-----ISENQ-------------------------------LHK 589

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           IPSEI +  +I KL+LS N+    P EL    +L+ L +S+
Sbjct: 590 IPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNISQ 630


>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
          Length = 1641

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 59/365 (16%)

Query: 13  SLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLK 61
           S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L 
Sbjct: 16  SVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 182 --------------------------------SWTMLTELIA-------------SKNLL 196
                                           S   L EL A             S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 65/371 (17%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEA-----------------------CQLR-LSVLDLSNNSLSGLP 291
             LD+  N+L+E   E                         QL+ LS+L +  N L  +P
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVP 282

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG    L +L+LT N L  L  SL                               +T 
Sbjct: 283 EAIGDCENLSELILTENLLTALPHSLGK-----------------------------LTK 313

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T L+V    L +       +P EI     ++ L L  N +  LPPEL+  A L  L ++
Sbjct: 314 LTNLNVDRNHLEV-------LPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVA 366

Query: 412 RNKIKDWPDAI 422
            N+++  P A+
Sbjct: 367 GNRLRSLPFAL 377



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 190/450 (42%), Gaps = 109/450 (24%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 74  LPPEVANFMQLVELDV------------------------SRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKS---- 165

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                             LP  +  +  L +L L GN L  L  +L  G  P L      
Sbjct: 166 ------------------LPASLSFLVKLEQLDLGGNDLEVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LSA+P E+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSALPPELGNLRRLVCLDVSENR 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ELP EL     L  L+LS+N ++  PD I   L  LS LK+D N L +VP +   D  
Sbjct: 232 LEELPAELGGLVLLTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVP-EAIGDCE 289

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
            L  L L+ N+         ++LPH                 + +L +L  L++ +N L+
Sbjct: 290 NLSELILTENL--------LTALPH----------------SLGKLTKLTNLNVDRNHLE 325

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELV 541
            +P       +L+ L L DN ++ LPPEL 
Sbjct: 326 VLPPEIGGCVALSVLSLRDNRLAVLPPELA 355



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L+  P +I R  + L  L L  N L+ +P+ F  L +L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQ 72

Query: 535 ALPPELV 541
            LPPE+ 
Sbjct: 73  RLPPEVA 79


>gi|1184075|gb|AAC15779.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|60327192|gb|AAX19019.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|1587673|prf||2207203A Cf-2 gene
          Length = 1112

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 251/514 (48%), Gaps = 36/514 (7%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L  N +   + E++  L  LT L++S N L   +PA++G L+ L  L +  N +
Sbjct: 240 NLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQL 299

Query: 104 M-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCS 160
              IP+EIG   +L     S N L   +P+SLG   NLS     NN ++ S+P  L + +
Sbjct: 300 SGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLN 359

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            +S L +  N+L+      + +   L+ L    N L+G +P ++G+L+ L RL L+ N++
Sbjct: 360 NLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQL 419

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR 276
             SIP  I    SL    + NN+++  +PA  G +S L  L L+ NQL     E    LR
Sbjct: 420 SGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLR 479

Query: 277 -LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+VLDLS N+L+G +P   G +  L +L L  N L         G  P  + YLRS   
Sbjct: 480 SLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLS--------GSIPEEIGYLRSLNV 531

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  L LS N
Sbjct: 532 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNDLGLSEN 585

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P  L +  +L  L L  N++       +  LSSL+ L L NN L  +    F +
Sbjct: 586 ALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLNGLIPASFGN 645

Query: 450 IPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLS 506
           +  LQ L L+ N  I  +P +    +L  L+ LY+ R  L+ + P  +  +  L++L +S
Sbjct: 646 MRNLQALILNDNNLIGEIPSS--VCNLTSLEVLYMPRNNLKGKVPQCLGNISNLQVLSMS 703

Query: 507 QNSLQS-IPEGFKNLTSLTELDLSDNNISALPPE 539
            NS    +P    NLTSL  LD   NN+    P+
Sbjct: 704 SNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQ 737



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 239/514 (46%), Gaps = 56/514 (10%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L  L L +N +   + E++  L  LT L++S N L   +PA++G ++ L  L +  N +
Sbjct: 192 NLSFLYLYNNQLSGSIPEEISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQL 251

Query: 104 M-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCS 160
              IP+EI    +L   D S N L   +P+SLG   NLS  F   N    S+PE++    
Sbjct: 252 SGSIPEEICYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLR 311

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
            ++ L +  N L       + +   L+ L    N L+G +P ++G+L+ L  L L+ N++
Sbjct: 312 SLNVLGLSENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQL 371

Query: 220 -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-- 275
             SIP+S+    +L+  Y+ NN LS  +PA LG L+ L  L L++NQL     E      
Sbjct: 372 SGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLS 431

Query: 276 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L+ LDLSNNS++G +P   G M+ L  L L  N L +          P  + YLRS   
Sbjct: 432 SLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLAS--------SVPEEIGYLRSLNV 483

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN  + +       +   +RL++ + +LS       +IP EI     +  LDLS N
Sbjct: 484 LDLSENALNGSIPASFGNLNNLSRLNLVNNQLS------GSIPEEIGYLRSLNVLDLSEN 537

Query: 391 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           ++   +P    +  +L  L L  N++       +  L SL+ L L  N L          
Sbjct: 538 ALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALN-------GS 590

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQN 508
           IP           ASL       +L +L  LYL   QL  + P +I  L  L  L L  N
Sbjct: 591 IP-----------ASL------GNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN 633

Query: 509 SLQS-IPEGFKNLTSLTELDLSDNNISALPPELV 541
           SL   IP  F N+ +L  L L+DNN+    P  V
Sbjct: 634 SLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 248/557 (44%), Gaps = 100/557 (17%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L+ L L+ NNI   +  ++ NL  L  L++++N++S  +P  IG L  L+ + +  N + 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLN 156

Query: 105 K-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSK 161
             IP EIG   +L K     N L   +P+S+G   NLS     NN ++ S+PE+++    
Sbjct: 157 GFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRS 216

Query: 162 MSKLDVEGNKLT-----------------VLSNNL-------IASWTMLTELIASKNLLN 197
           +++LD+  N L                  +  N L       I     LT L  S+N LN
Sbjct: 217 LTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALN 276

Query: 198 G-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +P ++G+L+ L  L L+ N++  SIP  I    SL    +  NAL+  +PA LG L  
Sbjct: 277 GSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKN 336

Query: 255 LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           L  L+L +NQL      +      LS+L L NN LSG +P  +G +  L  L L  N L 
Sbjct: 337 LSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQL- 395

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                  +G  PA L  L +                     +RL + + +LS       +
Sbjct: 396 -------SGSIPASLGNLNN--------------------LSRLYLYNNQLS------GS 422

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP EI     +T LDLS NSI   +P    + ++L  L L  N++       +  L SL+
Sbjct: 423 IPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLN 482

Query: 431 CLKLDNNPLRQVPSDGF-----------------KDIP-------MLQILDLSYNI--AS 464
            L L  N L       F                   IP        L +LDLS N    S
Sbjct: 483 VLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGS 542

Query: 465 LPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTS 522
           +P +  F +L +L  L L   QL  + P +I  L+ L  L LS+N+L  SIP    NL +
Sbjct: 543 IPAS--FGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNN 600

Query: 523 LTELDLSDNNISALPPE 539
           L+ L L +N +S   PE
Sbjct: 601 LSMLYLYNNQLSGSIPE 617



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 207/471 (43%), Gaps = 56/471 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALV 117
           + E++  L  L  L +S N L   +PA++G L+ L  L +  N +   IP+EIG  ++L 
Sbjct: 567 IPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLT 626

Query: 118 KFDCSSNQLKEL-PSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                +N L  L P+S G   NL     + NN I  +P  + + + +  L +  N L   
Sbjct: 627 YLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGK 686

Query: 176 SNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLA 233
               + + + L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL 
Sbjct: 687 VPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLE 746

Query: 234 EFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG 289
            F M NN LS  LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+ 
Sbjct: 747 VFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLND 805

Query: 290 -LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             P  +G +  LR L LT N L   +RSS      P L     SR   ++D   S   E 
Sbjct: 806 TFPMWLGTLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EH 864

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           L  M T +  T +E S E     ++         +TK          L  E+    SL T
Sbjct: 865 LKGMRT-VDKTMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYT 907

Query: 408 LI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           +I LS NK +    ++L  L ++  L + +N L+         + +L+ LDLS+N  S  
Sbjct: 908 VIDLSSNKFEGHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS-- 965

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 516
                                 E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 ---------------------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 40/182 (21%)

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDA 421
           +L     S++PS       +  LDLS+N+I   +PPE+ +  +L  L L+ N+I      
Sbjct: 85  TLYAFPFSSLPS-------LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPP 137

Query: 422 ILTSLSSLSCLKLDNNPLRQVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPH 476
            +  L+ L  +++ +N L     +GF  K+I  L+ L  LS  I  L  + P S  +L +
Sbjct: 138 QIGLLAKLQIIRIFHNQL-----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNN 192

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L  LYL   QL                        SIPE    L SLTELDLSDN ++  
Sbjct: 193 LSFLYLYNNQLS----------------------GSIPEEISYLRSLTELDLSDNALNGS 230

Query: 537 PP 538
            P
Sbjct: 231 IP 232


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 51/416 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS   L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + NN  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 180/395 (45%), Gaps = 68/395 (17%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSL 206
           + +LP  +     + KLD+ GN+ T+LS  +   W +  L +L  + N L  +P+ IG L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEI---WQLKDLQKLNLNNNKLTVLPKEIGQL 109

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L LH N ++++P  I    +L +  + NN L+ LP E+G+L  L  L L SN+L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  QL+ L  LDL+NN  + +  E+  + TL  L L  N L+T+         P  
Sbjct: 170 SLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI---------PKE 220

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           ++ L+S                            K L L G  L+++P EI +   +  L
Sbjct: 221 IRQLKSL---------------------------KVLMLTGNQLTSLPKEIEQLQNLKTL 253

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +L  N  Q  P E+    +L  L L  N++ ++P  +   L SL  L L +N +  +P +
Sbjct: 254 NLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVE 312

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                                     + LP LQEL+L   ++   P +IL+L+ L  L L
Sbjct: 313 -------------------------VTQLPDLQELHLSGNKITILPKEILQLKNLEWLSL 347

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           S N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 348 SNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I   L +L  L L +N L  +P +                              +LQ+
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKNLQK 137

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL++N  + +  E
Sbjct: 138 LNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKE 197

Query: 540 LV 541
           ++
Sbjct: 198 VM 199


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 135/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N +  LP +IG L  LK L +  N + +
Sbjct: 100 NLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSE 159

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 160 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 219

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L   L      LTEL+ ++N L  +P+++G L +L  L+  +N+++S+P  
Sbjct: 220 KVDQNRLTHLPEAL-GDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKE 278

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + NN L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 279 IGGCCSLTVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTLKLKALWLSDN 338



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 17/331 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 55  LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 114

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N +  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 115 PDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLD 174

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P ++
Sbjct: 175 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEAL 233

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C +L E  +  N L  LP  +GKL KL  L+   N+L     E   C   L+V  + N
Sbjct: 234 GDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEIGGC-CSLTVFCVRN 292

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P E+ + T L  L + GN L  L  SL      AL       L +N+       
Sbjct: 293 NRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTLKLKALW------LSDNQ------- 339

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            + L+T  T    T+ E  L  + L  +PSE
Sbjct: 340 SQPLLTFQTDTDRTTGEKILTCVLLPQLPSE 370



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 37/375 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S
Sbjct: 2   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 61

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LP+ L   
Sbjct: 62  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +LD+  N +  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+
Sbjct: 122 QRLEELDLGNNDIYNLPKS-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 180

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             +P  ISG  SL +  +  N L  +P  +GKL K                      LS+
Sbjct: 181 ERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSI 218

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L +  N L+ LP  +G    L +L+LT N L TL  S+        LK L S L  + + 
Sbjct: 219 LKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSV------GKLKKL-SNLNADRNK 271

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             S  KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L
Sbjct: 272 LVSLPKE--IGGCCSLTV----FCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSL 325

Query: 400 SSCASLQTLILSRNK 414
           ++   L+ L LS N+
Sbjct: 326 TT-LKLKALWLSDNQ 339



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 9   LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 68

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 69  PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELD 128

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N +  L  S+      ALL                                 K+L L
Sbjct: 129 LGNNDIYNLPKSI-----GALLHL-------------------------------KDLWL 152

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 153 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 211

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L  +P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 212 KLKKLSILKVDQNRLTHLP-EALGDCENLTELVLTENRLLTLPKS--VGKLKKLSNLNAD 268

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +S LP  L ++
Sbjct: 269 RNKLVSLPKEIGGCCSLTVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTL 328



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LD+SRN I E+P  +S C +LQ    S N + 
Sbjct: 7   VKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLT 66

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       D    +  L+
Sbjct: 67  RLPES-FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLE 125

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N I +LP++    +L HL++L+L   QL E P +I  L+ L  LD+S+N L+ +
Sbjct: 126 ELDLGNNDIYNLPKS--IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL 183

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  +P
Sbjct: 184 PEEISGLTSLTDLVISQNLLETIP 207



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 15/256 (5%)

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +  ++  LRKL L+ N ++ L   + N      L   R+ +PE  +S +      +   +
Sbjct: 2   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 61

Query: 353 ----TRLSVTSKE------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
               TRL  +  E      LS+  ++L ++P  I     +  L+L  N +  LP  L+  
Sbjct: 62  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
             L+ L L  N I + P +I  +L  L  L LD N L ++P +   ++  L  LD+S N 
Sbjct: 122 QRLEELDLGNNDIYNLPKSI-GALLHLKDLWLDGNQLSELPQE-IGNLKNLLCLDVSENR 179

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           +  LPE    S L  L +L + +  L   P  I +L++L IL + QN L  +PE   +  
Sbjct: 180 LERLPEE--ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCE 237

Query: 522 SLTELDLSDNNISALP 537
           +LTEL L++N +  LP
Sbjct: 238 NLTELVLTENRLLTLP 253


>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 354

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 19/313 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           + + L+ +     L+LS ++L   P E+  +KN               LQKL L+ N + 
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELT 77

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K
Sbjct: 78  VLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEK 137

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +   
Sbjct: 138 LNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGE 197

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+ 
Sbjct: 198 AL-QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLS 256

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++
Sbjct: 257 ENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316

Query: 298 TTLRKLLLTGNPL 310
             L++L L  NP 
Sbjct: 317 KNLQRLELDSNPF 329



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 38/322 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQTLILSRN 413
           +  LP E+    +LQ L L  N
Sbjct: 306 LTNLPKEIGQLKNLQRLELDSN 327



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 20/266 (7%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 335
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V       L+ L+   L  
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQ------LQNLQELSLHS 96

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ +      E L ++        K L L    L  +P E+     + KL+LS N +  +
Sbjct: 97  NKLTNLPKEIEQLKSL--------KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAV 148

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+    +LQ L L  N+I   P  I   L  L  L L+NN  + VP +  + +  LQ 
Sbjct: 149 PKEIGQLKNLQILKLDHNQIVSLPKEI-EGLQELKELILENNRFKNVPGEALQ-LKNLQK 206

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L+LS N + S+P+      L +L++L L R Q+   PT++L+LQ L+ L LS+N   S+P
Sbjct: 207 LNLSENQLVSIPK--EILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLP 264

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           +    L +L  L L +N ++ LP E+
Sbjct: 265 KEIDKLKNLRWLSLKNNRLTTLPKEI 290



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 26/218 (11%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 449
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 450 IPML---QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           I  L   QIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+N L SIP+    L +L +L L  N I+ LP E++ +
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247


>gi|440296439|gb|ELP89266.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           invadens IP1]
          Length = 508

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 233/517 (45%), Gaps = 54/517 (10%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLP------LLTVLNVSHNKLSELPAAIGELH 91
           G K  +   + K +LA + IE   +++   P        + LN S N  +E+P  + ++ 
Sbjct: 2   GAKGSKGAKIDKKMLAMDTIEITGKNMSTFPKGIEKCQCSNLNCSVNDFTEIPPEVFQMV 61

Query: 92  MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT- 150
            L+ L +S N I  +PD I  AT           L+EL            + A NN    
Sbjct: 62  NLEILTLSENRITSVPDSISVAT----------NLREL------------YLAKNNLFYD 99

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            +  ++  CS + +LD+  NKL  +    I S   L  L  S+N L  +P  IG L +L 
Sbjct: 100 GISAEIKKCSNLQRLDISNNKLEAIPME-IGSLLSLEYLNISENALQTIPPEIGMLDKLQ 158

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L +++N I  +P+ I     L E  M +N +  LP EL  +  L  L +  N+L     
Sbjct: 159 TLLMNKNSIQKLPAEIGNLRGLYELDMSSNQMDMLPEELSNMLSLKILRIGYNKLSGNID 218

Query: 271 EACQLRLSV-LDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                +  V LD  NN  +  LPP +  +  L +L++   P+  +       P    LK 
Sbjct: 219 VLTHFKFLVELDCQNNPGILDLPP-LDSLQNLTRLVVRNLPITHI-------PGLTSLKM 270

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L   L   ++ +     E++  + T      + L   G N++ IP +I +   +  L+LS
Sbjct: 271 L-CELNVRDNLKMQGIPEEIFEITTL-----QRLDFVGCNITVIPEDIQKLTALNMLELS 324

Query: 389 RNSIQE--LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           RN++ E   PP +S+  S+  L LS NK+  +P   L  L+S+  L + NN L   P D 
Sbjct: 325 RNALTEASFPPAVSTLTSISKLSLSGNKLHTYPQT-LCDLTSVVDLDISNNLLVDFP-DA 382

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           F  +  +QIL  + N I  +PE      L  +  + L+  QL+  P  I  ++QL  L+L
Sbjct: 383 FGQLSNIQILCAAGNKINRIPE--VMDKLISVTYMDLKNNQLKRLPATIGEMRQLNRLEL 440

Query: 506 SQNSLQSIPEGFKNLTSLTE-LDLSDNNISALPPELV 541
           + N L  +P     L  + + LDLS+N +   P ++V
Sbjct: 441 AHNMLPVLPPEMGQLEGIIQVLDLSNNPLVIPPKDIV 477



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 184/418 (44%), Gaps = 62/418 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L +++N +E +  ++ +L  L  LN+S N L  +P  IG L  L++L ++ NSI K
Sbjct: 110 NLQRLDISNNKLEAIPMEIGSLLSLEYLNISENALQTIPPEIGMLDKLQTLLMNKNSIQK 169

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L + D SSNQ+  LP  L   L+L   +   N ++   + L     + +L
Sbjct: 170 LPAEIGNLRGLYELDMSSNQMDMLPEELSNMLSLKILRIGYNKLSGNIDVLTHFKFLVEL 229

Query: 166 DVEGN-------KLTVLSN-------NL-------IASWTMLTELIASKNL-LNGMPETI 203
           D + N        L  L N       NL       + S  ML EL    NL + G+PE I
Sbjct: 230 DCQNNPGILDLPPLDSLQNLTRLVVRNLPITHIPGLTSLKMLCELNVRDNLKMQGIPEEI 289

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS--ALPAELGKLSKLGTLDLH 261
             ++ L RLD     I  IP  I    +L    +  NAL+  + P  +  L+ +  L L 
Sbjct: 290 FEITTLQRLDFVGCNITVIPEDIQKLTALNMLELSRNALTEASFPPAVSTLTSISKLSLS 349

Query: 262 SNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L  Y    C L   V LD+SNN L   P   G+++ ++ L   GN +          
Sbjct: 350 GNKLHTYPQTLCDLTSVVDLDISNNLLVDFPDAFGQLSNIQILCAAGNKI---------- 399

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                     +R+PE  D   S T  D                L+   L  +P+ I E  
Sbjct: 400 ----------NRIPEVMDKLISVTYMD----------------LKNNQLKRLPATIGEMR 433

Query: 381 EITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
           ++ +L+L+ N +  LPPE+      +Q L LS N +   P  I+    +  C  L  N
Sbjct: 434 QLNRLELAHNMLPVLPPEMGQLEGIIQVLDLSNNPLVIPPKDIVVKGPAAICRYLKEN 491


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 133/261 (50%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQ 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EIGK+  L  L L  N L TL
Sbjct: 294 EIGKLKNLLWLSLVYNQLTTL 314



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 12/287 (4%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L N  IA  
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNE-IAKL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L   ++ NN L+
Sbjct: 230 KKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            LP E+GKL  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 290 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 336



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 146/345 (42%), Gaps = 61/345 (17%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS +             
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD------------- 156

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                      I  L  L  LDL  N++ ++P+ I    +L   Y+  N  +  P E+G+
Sbjct: 157 -----------IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L++NQ+     E  +L+ L  L LS+N L  LP EI ++  L+ L L  N L
Sbjct: 206 LQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQL 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 266 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 289

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 290 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 334



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 155/363 (42%), Gaps = 66/363 (18%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   L +     S   + +LP ++     + +L +  N+LTVL           
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVL----------- 84

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ I  L  L  L L  NR+ ++P  I    +L    +G+N L+ LP
Sbjct: 85  -------------PQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLP 131

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+ +L  L  L LHSN+L     +  QL+ L  LDLSNN L+ LP EI ++  L+ L L
Sbjct: 132 QEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYL 191

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           + N                                A+  KE  I     L V    L L 
Sbjct: 192 SENQF------------------------------ATFPKE--IGQLQNLKV----LFLN 215

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              ++ +P+EI +  ++  L LS N +  LP E+    +LQTL L  N++K  P  I   
Sbjct: 216 NNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEI-EQ 274

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
           L +L  L L NN L  +P +  K +  L  L L YN + +LP       L +LQ LYL  
Sbjct: 275 LKNLQTLFLSNNQLTILPQEIGK-LKNLLWLSLVYNQLTTLPN--EIEQLKNLQTLYLNN 331

Query: 485 MQL 487
            Q 
Sbjct: 332 NQF 334



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 142/306 (46%), Gaps = 42/306 (13%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +    L  LP E+GKL  L  L LH NQL     E  QL+ L +L L +N L+ LP EI 
Sbjct: 53  LSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIE 112

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L+ L L  N L  L   +       LL YL S                      RL
Sbjct: 113 QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL-YLHS---------------------NRL 150

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
           +  SK+              I +   +  LDLS N +  LP E+    +L++L LS N+ 
Sbjct: 151 TTLSKD--------------IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF 196

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
             +P  I   L +L  L L+NN +  +P++  K +  LQ L LS N + +LP+      L
Sbjct: 197 ATFPKEI-GQLQNLKVLFLNNNQITILPNEIAK-LKKLQYLYLSDNQLITLPK--EIEQL 252

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
            +LQ L LR  QL+  P +I +L+ L+ L LS N L  +P+    L +L  L L  N ++
Sbjct: 253 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLT 312

Query: 535 ALPPEL 540
            LP E+
Sbjct: 313 TLPNEI 318



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 60/232 (25%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LSN  L  +PNE+                                 E L+NL     
Sbjct: 165 SLDLSNNQLTTLPNEI---------------------------------EQLKNLK---S 188

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ +  P  IG+L  LK L ++ N I  +P+EI     L     S NQL  LP  
Sbjct: 189 LYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKE 248

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL      NN + +LP+++     +  L +  N+LT+L                 
Sbjct: 249 IEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL----------------- 291

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                  P+ IG L  L+ L L  N++ ++P+ I    +L   Y+ NN  S+
Sbjct: 292 -------PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 336


>gi|410929299|ref|XP_003978037.1| PREDICTED: protein LAP2-like [Takifugu rubripes]
          Length = 1355

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 188/432 (43%), Gaps = 74/432 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+ S+ SL  VP E++ +F++            LQ+L L  N IE+L + L N  +L  
Sbjct: 41  SLDYSHCSLETVPKEIF-SFEKT-----------LQELYLDANQIEELPKQLFNCQVLHR 88

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPAAI  L  L+ LDVS NSI + P+ I +   L   + S N + +LP  
Sbjct: 89  LSMPDNDLAVLPAAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKLPEG 148

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + L+L+    ++  +  LP      +K+  L++  N+L VL                 
Sbjct: 149 FTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKVL----------------- 191

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+++  L++L RLDL  N    +P  +     + E +M  N L+ LP  LGKL
Sbjct: 192 -------PKSMQKLTQLERLDLGSNEFTEVPEVLDQLGGIRELWMDGNRLTFLPGMLGKL 244

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  LD+  N L+    + C    L  L LSNN+L+ LP  IG +  L  L +  N L 
Sbjct: 245 KQLVYLDVSKNNLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLM 304

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L                        DS    T  D             EL      + A
Sbjct: 305 YL-----------------------PDSIGGLTSLD-------------ELDCSFNEIEA 328

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +PS I +   I       N + +LPPE+ +  +   L L  NK++  P+  +  +  L  
Sbjct: 329 LPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHSNKLESLPEE-MGDMQKLKV 387

Query: 432 LKLDNNPLRQVP 443
           + L NN L+ +P
Sbjct: 388 INLSNNKLKNLP 399



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 188/452 (41%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + SLD S  S+  +P EI S    L +    +NQ++ELP  L  C  L      +
Sbjct: 34  GEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQVLHRLSMPD 93

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +  LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 94  NDLAVLPAAIANLINLRELDV------------------------SKNSIQEFPENIKNC 129

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   SL + Y+ +  L  LPA  G+L+KL           
Sbjct: 130 KVLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKL----------- 178

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+T L +L L  N                  
Sbjct: 179 -----------QILELRENQLKVLPKSMQKLTQLERLDLGSNEF---------------- 211

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               + +PE  D                     +EL ++G  L+ +P  + +  ++  LD
Sbjct: 212 ----TEVPEVLDQLGGI----------------RELWMDGNRLTFLPGMLGKLKQLVYLD 251

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+++ +  ++  C SLQ L+LS N +   P +I  SL  L+ LK+D N L  +P D 
Sbjct: 252 VSKNNLEMVDEQICGCESLQDLLLSNNALTQLPGSI-GSLKKLTALKVDENQLMYLP-DS 309

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  L  LD S+N I +LP +        ++        L + P ++   +   +L L
Sbjct: 310 IGGLTSLDELDCSFNEIEALPSS--IGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFL 367

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+S+PE   ++  L  ++LS+N +  LP
Sbjct: 368 HSNKLESLPEEMGDMQKLKVINLSNNKLKNLP 399



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 24/191 (12%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L ++ NN+E + E +     L  L +S+N L++LP +IG L  L +L V  N +M +PD 
Sbjct: 250 LDVSKNNLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDS 309

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG  T+L + DCS N+++ LPSS+G+C+ +  F A +N +  LP ++ +           
Sbjct: 310 IGGLTSLDELDCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGN----------- 358

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                        W   T L    N L  +PE +G + +L  ++L  N++ ++P S +  
Sbjct: 359 -------------WKNATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKL 405

Query: 230 CSLAEFYMGNN 240
             +   ++  N
Sbjct: 406 SQMTAMWLSEN 416



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL++L L  N +  L   L N        
Sbjct: 31  CLRGEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFN-------- 82

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                  +  RLS+   +L++       +P+ I     + +LD+
Sbjct: 83  ---------------------CQVLHRLSMPDNDLAV-------LPAAIANLINLRELDV 114

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+NSIQE P  + +C  L  +  S N I   P+   T L SL+ L L++  L  +P+  F
Sbjct: 115 SKNSIQEFPENIKNCKVLAIVEASVNPISKLPEG-FTQLLSLTQLYLNDAFLEFLPA-SF 172

Query: 448 KDIPMLQILDLSYN-IASLPEN--------------PPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP++                F+ +P        ++EL++   
Sbjct: 173 GRLTKLQILELRENQLKVLPKSMQKLTQLERLDLGSNEFTEVPEVLDQLGGIRELWMDGN 232

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  + +L+QL  LD+S+N+L+ + E      SL +L LS+N ++ LP
Sbjct: 233 RLTFLPGMLGKLKQLVYLDVSKNNLEMVDEQICGCESLQDLLLSNNALTQLP 284


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E             +  +  +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  I  L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P  +G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 98  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+LP+++     +  L +  N+LT+L N  I     L  L   
Sbjct: 205 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNE-IRQLKNLQTLNLR 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  + + I  L  L  LDL  N++ + P  I    +L    +G+N L+ LP  +G+L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L TLDL SNQL     E  QL+ L  L L+NN LS
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLS 360



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+ +L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 294 PKGIGQLKNLQVLDLGSNQLTTL 316



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 160/360 (44%), Gaps = 39/360 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EI ++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEI-- 274

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P  I + 
Sbjct: 275 --------------------------EQLQNL--------KSLDLRSNQLTTFPKGIGQL 300

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  LDL  N +  LP  +    +LQTL L  N++   P  I   L +L  L L+NN L
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI-GQLQNLQELFLNNNQL 359



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 156/331 (47%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-RQLKNLQTLNLRNNRLTTLS----KE 273

Query: 450 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
           I  LQ                     +L+ L LR  QL   P  I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQ 312

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L ++PEG   L +L  LDL  N ++ LP E+
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 343



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 43/362 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    I     L 
Sbjct: 39  DLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IGQLKNLR 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  N L+ LP 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++  L+ L L+
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L TL         P  + +L++              +DL  ++ +L++         
Sbjct: 218 TNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTI--------- 246

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
                +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +P  I   L
Sbjct: 247 -----LPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGI-GQL 300

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
            +L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +LQEL+L   
Sbjct: 301 KNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQ--EIGQLQNLQELFLNNN 357

Query: 486 QL 487
           QL
Sbjct: 358 QL 359



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ + +  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTTFPKG-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 7/205 (3%)

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 456
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 145

Query: 457 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 516 GFKNLTSLTELDLSDNNISALPPEL 540
               L +L  LDLS N ++ LP E+
Sbjct: 204 EIGQLQNLQSLDLSTNRLTTLPQEI 228


>gi|323455615|gb|EGB11483.1| hypothetical protein AURANDRAFT_21287, partial [Aureococcus
           anophagefferens]
          Length = 496

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 233/518 (44%), Gaps = 84/518 (16%)

Query: 1   MDRILKA-ARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-DLQKLILAHNNIE 58
           +DR+    AR +  L+ S ++ R +P ++Y        G +  EA+ DL  + +  N +E
Sbjct: 29  VDRVAAIRARGADRLDASRQAYRVLPPKLYV-------GHEAQEALADLVVIDVGDNKLE 81

Query: 59  KLKED-LRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           KL    L     L  L ++ N+L+ LP   +G++  L+ L +  N + +IP+ +G   +L
Sbjct: 82  KLPSGFLMWFASLRYLRLAGNRLTSLPKDELGKMGRLEVLKLDSNDLERIPESVGELRSL 141

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            + D S+N+L ELP SL    ++   +AS+N +  LP D++    +  L + GN L  L 
Sbjct: 142 RELDVSNNRLCELPESLQFVQSIECLRASSNSLVKLP-DVSGLQLLRDLQLRGNALFELP 200

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L      LT L    N ++ +P  +G+L +L  L++  NRI++ P S SG  +   F 
Sbjct: 201 DDL-PDLISLTRLDVHNNAIHKLPPRLGNLVKLRVLNISSNRIVTFPDSASGLLNCEVFL 259

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +  N L+ L   +G   +   +D   N+++        LR L  L LS N +  LPPEIG
Sbjct: 260 LRENELTLLGPWIGGWKRAAFVDATENRIESVDRAVGSLRNLIELRLSRNRIEQLPPEIG 319

Query: 296 KMTTLRKL-----LLTGNPLR----------TLRSSLVNGPTPALLKYLRSRLPENEDSE 340
               L        LL   P+            LR + ++G  P  +  LRS         
Sbjct: 320 LARALECFDASACLLCRLPVELGALAVLHTLRLRRNAISGHLPEQIGLLRS--------- 370

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                           VT  +L L    + ++P  I    E+ KLDLS N +  LP  + 
Sbjct: 371 ----------------VT--DLDLSRNTIESLPDTIGGLEELVKLDLSHNRLSTLPEAVV 412

Query: 401 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 460
            CA L  L LS N+IK  P  +   +S                         L++LDL  
Sbjct: 413 QCARLHELYLSSNRIKKLPLHLGECVS-------------------------LRVLDLQS 447

Query: 461 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           N IA +P N   + L +L+++YL +  LR  P D++ L
Sbjct: 448 NVIAEIPAN--LACLVNLKKIYLGKNLLRALPLDVVNL 483



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 25/290 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA------------------ 86
           + L +L + +N I KL   L NL  L VLN+S N++   P +                  
Sbjct: 207 ISLTRLDVHNNAIHKLPPRLGNLVKLRVLNISSNRIVTFPDSASGLLNCEVFLLRENELT 266

Query: 87  -----IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
                IG       +D + N I  +   +GS   L++   S N++++LP  +G    L  
Sbjct: 267 LLGPWIGGWKRAAFVDATENRIESVDRAVGSLRNLIELRLSRNRIEQLPPEIGLARALEC 326

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F AS   +  LP +L   + +  L +  N ++      I     +T+L  S+N +  +P+
Sbjct: 327 FDASACLLCRLPVELGALAVLHTLRLRRNAISGHLPEQIGLLRSVTDLDLSRNTIESLPD 386

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           TIG L  L++LDL  NR+ ++P ++  C  L E Y+ +N +  LP  LG+   L  LDL 
Sbjct: 387 TIGGLEELVKLDLSHNRLSTLPEAVVQCARLHELYLSSNRIKKLPLHLGECVSLRVLDLQ 446

Query: 262 SNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNP 309
           SN + E     AC + L  + L  N L  LP ++  +  T+ +L L  NP
Sbjct: 447 SNVIAEIPANLACLVNLKKIYLGKNLLRALPLDVVNLCETVDELHLDRNP 496



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 201/437 (45%), Gaps = 32/437 (7%)

Query: 116 LVKFDCSSNQLKELPSS-LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           LV  D   N+L++LPS  L    +L   + + N +TSLP+D  +  KM +L+V    L +
Sbjct: 70  LVVIDVGDNKLEKLPSGFLMWFASLRYLRLAGNRLTSLPKD--ELGKMGRLEV----LKL 123

Query: 175 LSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            SN+L      +     L EL  S N L  +PE++  +  +  L    N ++ +P  +SG
Sbjct: 124 DSNDLERIPESVGELRSLRELDVSNNRLCELPESLQFVQSIECLRASSNSLVKLPD-VSG 182

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
              L +  +  NAL  LP +L  L  L  LD+H+N + +       L +L VL++S+N +
Sbjct: 183 LQLLRDLQLRGNALFELPDDLPDLISLTRLDVHNNAIHKLPPRLGNLVKLRVLNISSNRI 242

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
              P     +      LL  N L  L   +      A +    +R+ E+ D    + + +
Sbjct: 243 VTFPDSASGLLNCEVFLLRENELTLLGPWIGGWKRAAFVDATENRI-ESVDRAVGSLR-N 300

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           LI           EL L    +  +P EI  A  +   D S   +  LP EL + A L T
Sbjct: 301 LI-----------ELRLSRNRIEQLPPEIGLARALECFDASACLLCRLPVELGALAVLHT 349

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 466
           L L RN I       +  L S++ L L  N +  +P D    +  L  LDLS+N +++LP
Sbjct: 350 LRLRRNAISGHLPEQIGLLRSVTDLDLSRNTIESLP-DTIGGLEELVKLDLSHNRLSTLP 408

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           E         L ELYL   ++++ P  +     LR+LDL  N +  IP     L +L ++
Sbjct: 409 E--AVVQCARLHELYLSSNRIKKLPLHLGECVSLRVLDLQSNVIAEIPANLACLVNLKKI 466

Query: 527 DLSDNNISALPPELVSV 543
            L  N + ALP ++V++
Sbjct: 467 YLGKNLLRALPLDVVNL 483



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 161/392 (41%), Gaps = 92/392 (23%)

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTL 258
           E   +L+ L+ +D+  N++  +PS  +    SL    +  N L++LP  ELGK+ +L  L
Sbjct: 62  EAQEALADLVVIDVGDNKLEKLPSGFLMWFASLRYLRLAGNRLTSLPKDELGKMGRLEVL 121

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L SN L+       +LR L  LD+SNN L  LP  +  + ++  L  + N L       
Sbjct: 122 KLDSNDLERIPESVGELRSLRELDVSNNRLCELPESLQFVQSIECLRASSNSL------- 174

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                         +LP+    +                       L G  L  +P ++ 
Sbjct: 175 -------------VKLPDVSGLQLLRDL-----------------QLRGNALFELPDDLP 204

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--------------- 422
           +   +T+LD+  N+I +LPP L +   L+ L +S N+I  +PD+                
Sbjct: 205 DLISLTRLDVHNNAIHKLPPRLGNLVKLRVLNISSNRIVTFPDSASGLLNCEVFLLRENE 264

Query: 423 ------------------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 452
                                         + SL +L  L+L  N + Q+P +    I +
Sbjct: 265 LTLLGPWIGGWKRAAFVDATENRIESVDRAVGSLRNLIELRLSRNRIEQLPPE----IGL 320

Query: 453 LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNS 509
            + L+     A L    P    +L  L  L LRR  +    P  I  L+ +  LDLS+N+
Sbjct: 321 ARALECFDASACLLCRLPVELGALAVLHTLRLRRNAISGHLPEQIGLLRSVTDLDLSRNT 380

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           ++S+P+    L  L +LDLS N +S LP  +V
Sbjct: 381 IESLPDTIGGLEELVKLDLSHNRLSTLPEAVV 412


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 51/416 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS   L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ L L  N I
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  LP  IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 9/184 (4%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
             I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPKE--IGQLQN 157

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +  +
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 537 PPEL 540
           P E+
Sbjct: 218 PKEI 221


>gi|390339446|ref|XP_003725006.1| PREDICTED: protein scribble homolog [Strongylocentrotus purpuratus]
          Length = 434

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 169/346 (48%), Gaps = 16/346 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L +S N+L  LPA IG    L  LDVS N IM+IPD I    AL   D S N L  L
Sbjct: 28  LRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRL 87

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    +  +L     ++  + SLP+D+   S +  +++  N L VL ++L +    L  L
Sbjct: 88  PPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSL-SFLVKLETL 146

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L  +PET+G+L  L  L L  N++  +P  I    +L    +  N L  LP E+
Sbjct: 147 DLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEI 206

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L  L L  N L++      +L+ LS+L +  N L  L P IG    +++L+LT N
Sbjct: 207 GGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLITLTPAIGSCENMQELILTEN 266

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+ +       PT   L++L +    N D    T     I   TRL V    LSL    
Sbjct: 267 LLQEIP------PTIGSLRHLNNF---NVDRNRLTQLPAQIGKCTRLGV----LSLRDNR 313

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L  +P E+ +  E+  LD+  N +  LP +L++C +L+ L LS N+
Sbjct: 314 LLRLPPELGQLRELHVLDVCGNRLDWLPIQLANC-NLKALWLSENQ 358



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 164/335 (48%), Gaps = 36/335 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L  +P E+  NF            ++L +L ++ N+I ++ ++++    LT++
Sbjct: 31  LGLSDNELERLPAEI-GNF------------MNLLELDVSRNDIMEIPDNIKFCKALTIV 77

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + S N LS LP    +LH L+ L ++  S+  +P +IGS + L+  +   N LK LP SL
Sbjct: 78  DFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSL 137

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL----------------SN 177
              + L      +N +  LPE L     +S+L ++ N+LT+L                 N
Sbjct: 138 SFLVKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSEN 197

Query: 178 NL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           NL      I     LT+L  S+N L  +PE IG L  L  L + QNR++++  +I  C +
Sbjct: 198 NLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLITLTPAIGSCEN 257

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           + E  +  N L  +P  +G L  L   ++  N+L +   +  +  RL VL L +N L  L
Sbjct: 258 MQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRL 317

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           PPE+G++  L  L + GN L  L   L N    AL
Sbjct: 318 PPELGQLRELHVLDVCGNRLDWLPIQLANCNLKAL 352



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N +E+L E L  LP L+ L +  N+L+ LP  IG L  L  LDVS N++ 
Sbjct: 141 VKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQ 200

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDEIG   +L                       +D   S NC+  LPE +     +S 
Sbjct: 201 CLPDEIGGLQSL-----------------------TDLTLSQNCLEKLPEGIGKLKDLSI 237

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N+L  L+   I S   + ELI ++NLL  +P TIGSL  L   ++ +NR+  +P+
Sbjct: 238 LKIDQNRLITLT-PAIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPA 296

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I  C  L    + +N L  LP ELG+L +L  LD+  N+L    ++     L  L LS 
Sbjct: 297 QIGKCTRLGVLSLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLANCNLKALWLSE 356

Query: 285 NS 286
           N 
Sbjct: 357 NQ 358



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 148/349 (42%), Gaps = 61/349 (17%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  IG+   L+ LD+ +N I+ IP +I  C +L       N LS LP     
Sbjct: 34  SDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRLPP---- 89

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
               G   LH               L  L L++ SL  LP +IG M+ L  + L  N L+
Sbjct: 90  ----GFTQLHD--------------LRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLK 131

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  SL       L+K     L  NE  E   T   L  ++        EL L+   L+ 
Sbjct: 132 VLPDSL-----SFLVKLETLDLGSNELEELPETLGALPNLS--------ELWLDCNQLTI 178

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI   G +T LD+S N++Q LP E+    SL  L LS+N ++  P+ I   L  LS 
Sbjct: 179 LPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGI-GKLKDLSI 237

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 491
           LK+D N L  +                          P   S  ++QEL L    L+E P
Sbjct: 238 LKIDQNRLITL-------------------------TPAIGSCENMQELILTENLLQEIP 272

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             I  L+ L   ++ +N L  +P      T L  L L DN +  LPPEL
Sbjct: 273 PTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRLPPEL 321



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 24/271 (8%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRL 333
           L +L LS+N L  LP EIG    L +L ++ N +  +  ++       ++ +     SRL
Sbjct: 28  LRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRL 87

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P        T   DL           + L+L  ++L ++P +I     +  ++L  N ++
Sbjct: 88  PP-----GFTQLHDL-----------RHLTLNDVSLESLPQDIGSMSNLIAMELRENLLK 131

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
            LP  LS    L+TL L  N++++ P+  L +L +LS L LD N L  +P +   ++  L
Sbjct: 132 VLPDSLSFLVKLETLDLGSNELEELPET-LGALPNLSELWLDCNQLTILPPE-IGNLGNL 189

Query: 454 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 512
             LD+S N +  LP+      L  L +L L +  L + P  I +L+ L IL + QN L +
Sbjct: 190 TCLDVSENNLQCLPDE--IGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLIT 247

Query: 513 IPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           +     +  ++ EL L++N +  +PP + S+
Sbjct: 248 LTPAIGSCENMQELILTENLLQEIPPTIGSL 278



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           F  +  L+IL LS N +  LP      +  +L EL + R  + E P +I   + L I+D 
Sbjct: 22  FFRLTNLRILGLSDNELERLPAE--IGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDF 79

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S N L  +P GF  L  L  L L+D ++ +LP ++ S+
Sbjct: 80  SGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSM 117


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 186/427 (43%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP E++ +F+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEIF-SFERT-----------LEELYLDANQIEELPKQLFNCQALKKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N I + PD I     L   + S N + +LP   
Sbjct: 75  SMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         ++  +N              N + ++P+ +   S++ +LD+  N
Sbjct: 135 TQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L +L  LDL +NRI S+ + ISGC 
Sbjct: 195 EFSELP-EVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           SL +  +  N L  LP  +GKL KL TL +  NQL         L  L   D S N L  
Sbjct: 254 SLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR      N L  L   + N                              
Sbjct: 314 LPPTIGYLHSLRTFAADENFLSDLPREIGN------------------------------ 343

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +    L  L 
Sbjct: 344 --CRNVTV----MSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALW 397

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 398 LSDNQSK 404



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ + + +  L  L  L++  N+ SELP  + ++H LK L +  NS+  I
Sbjct: 163 LRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L   D + N+++ L + +  C +L D   S N +  LP+ +    K++ L 
Sbjct: 223 PGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT L N  I S ++L E   S N L  +P TIG L  L      +N +  +P  I
Sbjct: 283 VDDNQLTSLPNT-IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G+++KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 342 GNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKALIP 408



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 203/474 (42%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P EI S    L +    +NQ++ELP                
Sbjct: 19  GEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELP---------------- 62

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
                  + L +C  + KL +  N L+ L    IAS   L EL  SKN +   P+ I   
Sbjct: 63  -------KQLFNCQALKKLSMPDNDLSNLPTT-IASLVNLKELDISKNGIQEFPDNIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + ++ +  L  LPA  G+LSKL           
Sbjct: 115 KCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  +P  I +++ L +L L  N    L         P +L
Sbjct: 164 -----------RILELRENHLKTMPKSIHRLSQLERLDLGSNEFSEL---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + + S                            KEL L+  +L  IP  I +  ++  LD
Sbjct: 204 EQIHSL---------------------------KELWLDNNSLQTIPGSIGKLRQLRYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L++N I+ L  ++S C SL+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 237 LAKNRIESLDADISGCESLEDLLLSANMLQQLPDSI-GKLKKLTTLKVDDNQLTSLP-NT 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF--------------SSLP-------HLQELYLRR 484
              + +L+  D S N + SLP    +              S LP       ++  + LR 
Sbjct: 295 IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++ +LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 355 NKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKALIP 408



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 37/242 (15%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           +L+   +   L L N SL+ +P  + K                L+ L LA N IE L  D
Sbjct: 202 VLEQIHSLKELWLDNNSLQTIPGSIGK-------------LRQLRYLDLAKNRIESLDAD 248

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +     L  L +S N L +LP +IG+L  L +L V  N +  +P+ IGS + L +FDCS 
Sbjct: 249 ISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSC 308

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+ LP ++G   +L  F A  N ++ LP ++ +C  ++ + +  NKL  L        
Sbjct: 309 NELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEFL-------- 360

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG +++L  L+L  NR+ ++P + +    LA  ++ +N   
Sbjct: 361 ----------------PDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSK 404

Query: 244 AL 245
           AL
Sbjct: 405 AL 406



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 151/349 (43%), Gaps = 68/349 (19%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 34  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 93

Query: 255 LGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LD+  N ++E+   ++ C+  LSV++ S N ++ LP    ++  L +L L       
Sbjct: 94  LKELDISKNGIQEFPDNIKCCKC-LSVVEASVNPIAKLPEGFTQLLNLTQLFLND----- 147

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                      A L+YL    P N                ++L +    L L   +L  +
Sbjct: 148 -----------AFLEYL----PAN------------FGRLSKLRI----LELRENHLKTM 176

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
           P  I    ++ +LDL  N   ELP                         +L  + SL  L
Sbjct: 177 PKSIHRLSQLERLDLGSNEFSELP------------------------EVLEQIHSLKEL 212

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            LDNN L+ +P    K +  L+ LDL+ N I SL  +   S    L++L L    L++ P
Sbjct: 213 WLDNNSLQTIPGSIGK-LRQLRYLDLAKNRIESLDAD--ISGCESLEDLLLSANMLQQLP 269

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             I +L++L  L +  N L S+P    +L+ L E D S N + +LPP +
Sbjct: 270 DSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTI 318



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P EI     TL +L L  N +  L   L N    AL  
Sbjct: 16  CFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN--CQAL-- 71

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                           K+LS+   +LS +P+ I     + +LD+
Sbjct: 72  --------------------------------KKLSMPDNDLSNLPTTIASLVNLKELDI 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  +  C  L  +  S N I   P+   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEG-FTQLLNLTQLFLNDAFLEYLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + ++P++     L  L+ L L   +  E P  + ++  L+ L L 
Sbjct: 158 GRLSKLRILELRENHLKTMPKS--IHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLD 215

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            NSLQ+IP     L  L  LDL+ N I +L
Sbjct: 216 NNSLQTIPGSIGKLRQLRYLDLAKNRIESL 245



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 440 RQVPSDGFK-DIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILR 496
           R VP   F+ +  ++ +LD S+   SL + P   FS    L+ELYL   Q+ E P  +  
Sbjct: 10  RLVPCRCFRGEEEVISVLDYSH--CSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN 67

Query: 497 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            Q L+ L +  N L ++P    +L +L ELD+S N I   P
Sbjct: 68  CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP 108


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GLLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 136/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+  +L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L          LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-TGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAEL + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 390



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 188/438 (42%), Gaps = 72/438 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L  LP S     NL+    ++  + SLPE++ +   ++ L++                  
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELR----------------- 159

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                  +NLL  +P+++  L RL  LDL  N I S+P SI     L + ++  N LS L
Sbjct: 160 -------ENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSEL 212

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P E+G L  L  LD                      +S N L  LP EI  +T+L  L++
Sbjct: 213 PQEIGNLKSLLCLD----------------------VSENRLERLPEEISGLTSLTDLVI 250

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           + N L T+   +      ++LK  ++RL   +  EA+   E L            EL L 
Sbjct: 251 SQNLLETIPDGIGKLKKLSILKVDQNRL--TQLPEATGDCESLT-----------ELVLT 297

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L  +P  I +  +++ L+  RN +  LP E+  C SL    +  N++   P A L+ 
Sbjct: 298 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP-AELSQ 356

Query: 426 LSSLSCLKLDNNPLRQVP 443
            + L  L +  N L  +P
Sbjct: 357 ATELHVLDVAGNRLLHLP 374



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 164/333 (49%), Gaps = 21/333 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  ++L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P + 
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAT 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +GKL KL  L+   N+L    KE  +  C   L+V  +
Sbjct: 286 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE--IGGC-CSLTVFCV 342

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            +N L+ +P E+ + T L  L + GN L  L  SL      AL       L +N+     
Sbjct: 343 RDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLTTLKLKALW------LSDNQ----- 391

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
              + L+T  T    T+ E  L  + L  +PSE
Sbjct: 392 --SQPLLTFQTDTDHTTGEKILTCVLLPQLPSE 422



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 163/362 (45%), Gaps = 23/362 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L RL +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKEDLITMATRLSVTSKEL 362
           L  N L  L         P  L  LR RL E +  ++E  +  E +  +     V  K+L
Sbjct: 158 LRENLLTYL---------PDSLTQLR-RLEELDLGNNEIYSLPESIGAL-----VHLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L+G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I
Sbjct: 203 WLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI 262

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L 
Sbjct: 263 -GKLKKLSILKVDQNRLTQLP-EATGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLN 318

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
             R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L 
Sbjct: 319 ADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLT 378

Query: 542 SV 543
           ++
Sbjct: 379 TL 380



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 7/202 (3%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           NE+Y   +  G        V L+ L L  N + +L +++ NL  L  L+VS N+L  LP 
Sbjct: 184 NEIYSLPESIGA------LVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPE 237

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            I  L  L  L +S N +  IPD IG    L       N+L +LP + G C +L++   +
Sbjct: 238 EISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLT 297

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N + +LP+ +    K+S L+ + NKL  L    I     LT      N L  +P  +  
Sbjct: 298 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE-IGGCCSLTVFCVRDNRLTRIPAELSQ 356

Query: 206 LSRLIRLDLHQNRILSIPSSIS 227
            + L  LD+  NR+L +P S++
Sbjct: 357 ATELHVLDVAGNRLLHLPLSLT 378



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 199/432 (46%), Gaps = 57/432 (13%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKIL-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GTLKQLTYLDVSKNNIEVVEEGISGCE-SLQDLLLSSNSLQQLPETIGSLKKVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLE 365
           N L  L  S+  G   +L              E   +  ++ T+ + +   S  +  + +
Sbjct: 286 NQLIYLPDSV--GGLISL-------------EELDCSFNEIETLPSSIGQLSNIRTFAAD 330

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 425
              L+ +PSEI     +T L L  N ++ LP E+     L+ + LS N++K+ P    T 
Sbjct: 331 HNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLP-FTFTK 389

Query: 426 LSSLSCLKLDNN 437
           L  L+ + L +N
Sbjct: 390 LQQLTAMWLSDN 401



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 205/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKILPKTMSRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTLIPGFIGTLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C SLQ L+LS N ++  P+ I  SL  ++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETI-GSLKKVTTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLP--------------ENPPFSSLP-------HLQELYLRR 484
              +  L+ LD S+N I +LP              ++   + LP       H+  L+L  
Sbjct: 295 VGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     SL +L LS N++  LP
Sbjct: 218 RLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLP 269


>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 354

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 19/313 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           + + L+ +     L+LS ++L   P E+  +KN               LQKL L+ N + 
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELT 77

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K
Sbjct: 78  VLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEK 137

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +   
Sbjct: 138 LNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGE 197

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+ 
Sbjct: 198 AL-QLKNLQKLNLSENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLS 256

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++
Sbjct: 257 ENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316

Query: 298 TTLRKLLLTGNPL 310
             L++L L  NP 
Sbjct: 317 KNLQRLELDSNPF 329



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 38/322 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQTLILSRN 413
           +  LP E+    +LQ L L  N
Sbjct: 306 LTNLPKEIGQLKNLQRLELDSN 327



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 20/266 (7%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 335
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V       L+ L+   L  
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQ------LQNLQELSLHS 96

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ +      E L ++        K L L    L  +P E+     + KL+LS N +  +
Sbjct: 97  NKLTNLPKEIEQLKSL--------KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAV 148

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
           P E+    +LQ L L  N+I   P  I   L  L  L L+NN  + VP +  + +  LQ 
Sbjct: 149 PKEIGQLKNLQILKLDHNQIVSLPKEI-EGLQELKELILENNRFKNVPGEALQ-LKNLQK 206

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L+LS N + S+P+      L +L++L L R Q+   PT++L+LQ L+ L LS+N   S+P
Sbjct: 207 LNLSENQLISIPK--EILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLP 264

Query: 515 EGFKNLTSLTELDLSDNNISALPPEL 540
           +    L +L  L L +N ++ LP E+
Sbjct: 265 KEIDKLKNLRWLSLKNNRLTTLPKEI 290



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 26/218 (11%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 449
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 450 IPML---QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
           I  L   QIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           S+N L SIP+    L +L +L L  N I+ LP E++ +
Sbjct: 210 SENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247


>gi|443689982|gb|ELT92244.1| hypothetical protein CAPTEDRAFT_174612, partial [Capitella teleta]
          Length = 481

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 186/426 (43%), Gaps = 55/426 (12%)

Query: 46  DLQKLIL---AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +L+KL L     N +++L + +  +  L  L +  N+L  LP  IG    LK +++  N 
Sbjct: 55  NLEKLTLFSAVGNELKQLPDTMAKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNR 114

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD +   +AL +     NQL+ LPSS  +   L   + S+N +  LP+D+ + SK+
Sbjct: 115 VKSLPDSVSELSALEEIYLDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKL 174

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L+V GNKL                          +PE+ G +S +  +DL  N++  +
Sbjct: 175 RVLNVSGNKLE-----------------------GSLPESFGDISSVCEIDLSHNQLSEL 211

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY----CVEACQLRLS 278
           P       SL + +   N L +LP  +  L  +  L    N L+              L 
Sbjct: 212 PPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTDLK 271

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           VLD+S N +SGLP  IG +  L K+ +        R    NG     +  L SR      
Sbjct: 272 VLDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQNG---NWIDQLPSRFSH--- 325

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                     +TM        KE  L+   +S +P +      +  +DL +N ++ LP  
Sbjct: 326 ----------MTML-------KEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDS 368

Query: 399 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 458
                SL+   LS+N ++  P+ I   L SL  L+LDNN +  VPS    ++  LQ LDL
Sbjct: 369 FCQLRSLRVCQLSKNLLECLPENI-GELKSLVDLRLDNNQISDVPS-SLGELSNLQSLDL 426

Query: 459 SYNIAS 464
            +N+ +
Sbjct: 427 FHNLFT 432



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 204/458 (44%), Gaps = 60/458 (13%)

Query: 120 DCSSNQLKELPSSLGR---CLNLSDFKASNNCITSLPEDLAD-CSKMSKLDVEGNKLTVL 175
           D SS  L+ LP+SL     C +L++     N I  LP  L +   K++     GN+L  L
Sbjct: 13  DFSSLDLESLPTSLSDPVFCGSLTELFLDYNSICDLPASLFENLEKLTLFSAVGNELKQL 72

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            + + A    L +L   +N L  +P TIG+ S+L  +++  NR+ S+P S+S   +L E 
Sbjct: 73  PDTM-AKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSALEEI 131

Query: 236 YMGNNALSALPA-----------------------ELGKLSKLGTLDLHSNQLKEYCVEA 272
           Y+  N L  LP+                       ++G LSKL  L++  N+L+    E+
Sbjct: 132 YLDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLEGSLPES 191

Query: 273 CQLRLSV--LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                SV  +DLS+N LS LPP+     +L KL    N L++L   + + P    L +  
Sbjct: 192 FGDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLSFRD 251

Query: 331 SRLPENEDSEA-STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           + L     +E+   T  DL           K L + G  +S +P  I    ++ K+ +  
Sbjct: 252 NVLRRTPFTESFGETSTDL-----------KVLDISGNFISGLPESIGNLKKLEKIQIGS 300

Query: 390 -------------NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
                        N I +LP   S    L+   L  N+I + P+     L +L  + L  
Sbjct: 301 VICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPED-FGRLVNLEFIDLGQ 359

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 495
           N LR++P D F  +  L++  LS N+   LPEN     L  L +L L   Q+ + P+ + 
Sbjct: 360 NQLRRLP-DSFCQLRSLRVCQLSKNLLECLPEN--IGELKSLVDLRLDNNQISDVPSSLG 416

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
            L  L+ LDL  N    +P     LT+L  LD+ +N  
Sbjct: 417 ELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKF 454



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 185/438 (42%), Gaps = 98/438 (22%)

Query: 140 SDFKASNNCITSLPEDLAD---CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           SD   S+  + SLP  L+D   C  +++L ++ N +  L  +L  +   LT   A  N L
Sbjct: 10  SDGDFSSLDLESLPTSLSDPVFCGSLTELFLDYNSICDLPASLFENLEKLTLFSAVGNEL 69

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+T+  +  L +L L +N++ ++P +I     L    +  N + +LP  + +LS L 
Sbjct: 70  KQLPDTMAKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSALE 129

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            + L  NQL+                      GLP    ++T L++L ++ N L  L   
Sbjct: 130 EIYLDENQLE----------------------GLPSSFVQLTCLQRLEISDNILAHLPKD 167

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           + N      L  LR                        L+V+  +L  EG    ++P   
Sbjct: 168 IGN------LSKLRV-----------------------LNVSGNKL--EG----SLPESF 192

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
            +   + ++DLS N + ELPP+     SL  L   +N ++  PD I   L ++  L   +
Sbjct: 193 GDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWI-NHLPNVKHLSFRD 251

Query: 437 NPLRQVP-SDGFKDIPM-LQILDLSYN-IASLPEN------------------------- 468
           N LR+ P ++ F +    L++LD+S N I+ LPE+                         
Sbjct: 252 NVLRRTPFTESFGETSTDLKVLDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQ 311

Query: 469 ---------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 519
                      FS +  L+E YL   Q+ E P D  RL  L  +DL QN L+ +P+ F  
Sbjct: 312 NGNWIDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQ 371

Query: 520 LTSLTELDLSDNNISALP 537
           L SL    LS N +  LP
Sbjct: 372 LRSLRVCQLSKNLLECLP 389



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 23/239 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP--AAIGELHM-LKSLDVSFNSI 103
           L KL    N ++ L + + +LP +  L+   N L   P   + GE    LK LD+S N I
Sbjct: 221 LVKLFAEQNVLQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTDLKVLDISGNFI 280

Query: 104 MKIPDEIGSATALVKFDCSS-------------NQLKELPSSLGRCLNLSDFKASNNCIT 150
             +P+ IG+   L K    S             N + +LPS       L +     N I+
Sbjct: 281 SGLPESIGNLKKLEKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQIS 340

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLS 207
            LPED      +  +D+  N+L  L +    S+  L  L     SKNLL  +PE IG L 
Sbjct: 341 ELPEDFGRLVNLEFIDLGQNQLRRLPD----SFCQLRSLRVCQLSKNLLECLPENIGELK 396

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            L+ L L  N+I  +PSS+    +L    + +N  + LPA L KL+ L  LD++ N+ +
Sbjct: 397 SLVDLRLDNNQISDVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKFE 455



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 66/297 (22%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK 105
           LQ+L ++ N +  L +D+ NL  L VLNVS NKL   LP + G++  +  +D+S N + +
Sbjct: 151 LQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLEGSLPESFGDISSVCEIDLSHNQLSE 210

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL-----------------------SDF 142
           +P +     +LVK     N L+ LP  +    N+                       +D 
Sbjct: 211 LPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTDL 270

Query: 143 KA---SNNCITSLPEDLADCSKMSKLDV-------------EGNKLTVLSNNLIASWTML 186
           K    S N I+ LPE + +  K+ K+ +              GN +  L +   +  TML
Sbjct: 271 KVLDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQNGNWIDQLPSRF-SHMTML 329

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS--------------------- 225
            E    +N ++ +PE  G L  L  +DL QN++  +P S                     
Sbjct: 330 KEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLP 389

Query: 226 --ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
             I    SL +  + NN +S +P+ LG+LS L +LDL  N   E  + AC  +L+ L
Sbjct: 390 ENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHNLFTE--LPACLSKLTNL 444



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 33/178 (18%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSS---CASLQTLILSRNKIKDWPDAILTS 425
           +S +  +    G+ + LDL     + LP  LS    C SL  L L  N I D P ++  +
Sbjct: 1   MSCVEEDDHSDGDFSSLDL-----ESLPTSLSDPVFCGSLTELFLDYNSICDLPASLFEN 55

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 485
           L  L+      N L+Q+P                            + +  LQ+L+L+  
Sbjct: 56  LEKLTLFSAVGNELKQLPD-------------------------TMAKMRDLQKLFLQEN 90

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           QL   P  I    QL+++++  N ++S+P+    L++L E+ L +N +  LP   V +
Sbjct: 91  QLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSALEEIYLDENQLEGLPSSFVQL 148



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 4/101 (3%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L+   L+ N +E L E++  L  L  L + +N++S++P+++GEL  L+SLD+
Sbjct: 367 DSFCQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDL 426

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLK----ELPSSLGR 135
             N   ++P  +   T LV+ D   N+ +    E+P+   R
Sbjct: 427 FHNLFTELPACLSKLTNLVRLDVYENKFEMDWWEVPNIYKR 467


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 195/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G+  +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGECESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 150/356 (42%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L  LS LK+D N L Q+P                                 L EL L  
Sbjct: 264 KLKKLSILKVDQNRLTQLPE-------------------------AVGECESLTELVLTE 298

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QL   P  I +L++L  L+  +N L S+P+      SLT   + DN ++ +P E+
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|390335916|ref|XP_794429.3| PREDICTED: uncharacterized protein LOC589701 [Strongylocentrotus
           purpuratus]
          Length = 1864

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 62/337 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+  + +LR VP E+ + +DE            L++L+L  N+I +L  DL +  L
Sbjct: 13  TVKTLDFRHCNLRFVPEEIVE-YDET-----------LEELLLDSNDIRELPRDLFHCEL 60

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI------------------- 110
           L  L VS N+L  +P A+  L  L+ LD+S N I+++PD I                   
Sbjct: 61  LKKLGVSDNELVTIPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKL 120

Query: 111 -----GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
                G+ T LV FD S N+L+ LP+ + +  +L+D   S N +  LPE++   S ++ L
Sbjct: 121 SDKSFGNLTCLVYFDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTL 180

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+L  L ++ I     L ELI S N L  +P +IG L RL  L++ +N + S+P+ 
Sbjct: 181 KADNNQLASLPSS-IGGLVSLEELILSANDLEELPPSIGLLRRLRHLNVDENMLQSVPAE 239

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +  C  +    +  N L  LP E+G+++K                      L+V++LSNN
Sbjct: 240 LGSCSGITLLSLRGNYLQVLPDEIGRIAK----------------------LTVVNLSNN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN---PLRTLRSSLVN 319
            L  LP    K+  L+ L L+ N   PL  L+S  V+
Sbjct: 278 RLQSLPYSFTKLKNLQALWLSENQSKPLIPLQSEFVD 314



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 156/377 (41%), Gaps = 68/377 (18%)

Query: 70  LTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +  L+  H  L  +P  I E    L+ L +  N I ++P ++     L K   S N+L  
Sbjct: 14  VKTLDFRHCNLRFVPEEIVEYDETLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELVT 73

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P+++   ++L +   S N I  LP+++  C  +  ++V  N L  LS+    + T L  
Sbjct: 74  IPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVY 133

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
             AS N L  +P  +  L  L  L L +N +  +P +I    SL      NN L++LP+ 
Sbjct: 134 FDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLKADNNQLASLPSS 193

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +G L                      + L  L LS N L  LPP IG +  LR L +  N
Sbjct: 194 IGGL----------------------VSLEELILSANDLEELPPSIGLLRRLRHLNVDEN 231

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+++         PA L                      IT+          LSL G  
Sbjct: 232 MLQSV---------PAELGSCSG-----------------ITL----------LSLRGNY 255

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK-------DWPDA 421
           L  +P EI    ++T ++LS N +Q LP   +   +LQ L LS N+ K       ++ D 
Sbjct: 256 LQVLPDEIGRIAKLTVVNLSNNRLQSLPYSFTKLKNLQALWLSENQSKPLIPLQSEFVDH 315

Query: 422 ILTSLSSLSCLKLDNNP 438
           I T +  L+C      P
Sbjct: 316 IGTRV--LTCFMFPQQP 330



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 4/184 (2%)

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
           T +EL L+  ++  +P +++    + KL +S N +  +P  ++S   L+ L +S+N I +
Sbjct: 37  TLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELVTIPTAVASLIHLEELDISKNGIVE 96

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            PD I     SL  +++  NPL ++    F ++  L   D S N +  LP       L  
Sbjct: 97  LPDNI-KGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVYFDASCNRLEYLPAE--MDQLES 153

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L +L+L +  L + P +I +L  L  L    N L S+P     L SL EL LS N++  L
Sbjct: 154 LTDLHLSKNFLHQLPENIGQLSSLTTLKADNNQLASLPSSIGGLVSLEELILSANDLEEL 213

Query: 537 PPEL 540
           PP +
Sbjct: 214 PPSI 217



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 64/301 (21%)

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +CV   +  +  LD  + +L  +P EI +   TL +LLL  N +R L   L +     LL
Sbjct: 5   FCVRLGKETVKTLDFRHCNLRFVPEEIVEYDETLEELLLDSNDIRELPRDLFHC---ELL 61

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K                          +L V+  EL         IP+ +     + +LD
Sbjct: 62  K--------------------------KLGVSDNELV-------TIPTAVASLIHLEELD 88

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPD-----------------------AIL 423
           +S+N I ELP  +  C SL+ + +S N +    D                       A +
Sbjct: 89  ISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVYFDASCNRLEYLPAEM 148

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 482
             L SL+ L L  N L Q+P +    +  L  L    N +ASLP +     L  L+EL L
Sbjct: 149 DQLESLTDLHLSKNFLHQLP-ENIGQLSSLTTLKADNNQLASLPSS--IGGLVSLEELIL 205

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
               L E P  I  L++LR L++ +N LQS+P    + + +T L L  N +  LP E+  
Sbjct: 206 SANDLEELPPSIGLLRRLRHLNVDENMLQSVPAELGSCSGITLLSLRGNYLQVLPDEIGR 265

Query: 543 V 543
           +
Sbjct: 266 I 266



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 126/309 (40%), Gaps = 39/309 (12%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L E  + +N +  LP +L     L  L +  N+L         L  L  LD+S N +  
Sbjct: 37  TLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELVTIPTAVASLIHLEELDISKNGIVE 96

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  I    +LR + ++ NPL  L        T   L Y           +AS  + + +
Sbjct: 97  LPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLT--CLVYF----------DASCNRLEYL 144

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                   +  +L L    L  +P  I +   +T L    N +  LP  +    SL+ LI
Sbjct: 145 PAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLKADNNQLASLPSSIGGLVSLEELI 204

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           LS N +++ P +I   L  L  L +D N L+ VP++                        
Sbjct: 205 LSANDLEELPPSIGL-LRRLRHLNVDENMLQSVPAE------------------------ 239

Query: 470 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              S   +  L LR   L+  P +I R+ +L +++LS N LQS+P  F  L +L  L LS
Sbjct: 240 -LGSCSGITLLSLRGNYLQVLPDEIGRIAKLTVVNLSNNRLQSLPYSFTKLKNLQALWLS 298

Query: 530 DNNISALPP 538
           +N    L P
Sbjct: 299 ENQSKPLIP 307


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 193/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFDRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA   +L+KL  L+L  NQ  
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFDRLTKLQILELRENQ-- 172

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                               L  LP  + ++T L +L L  N    +         P +L
Sbjct: 173 --------------------LKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N + +LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEALPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL----------HMLK 94
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L            L+
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 95  SLDVSFNSIMKI-------------PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            L  +F+ + K+             P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FDR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|356566445|ref|XP_003551442.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RCH1-like [Glycine max]
          Length = 1122

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 241/535 (45%), Gaps = 70/535 (13%)

Query: 47  LQKLILAHNNIEKLKE-DLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           LQKL+++  N+  +   D+ N   L VL++S N L   +P++IG L  L++L ++ N + 
Sbjct: 100 LQKLVISGANLTGVISIDIGNCLELVVLDLSSNSLVGGIPSSIGRLRNLQNLSLNSNHLT 159

Query: 105 -KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNN--CITSLPEDLADCS 160
            +IP EIG    L   D   N L  +LP  LG+  NL   +A  N     ++P++L DC 
Sbjct: 160 GQIPSEIGDCVNLKTLDIFDNNLNGDLPVELGKLSNLEVIRAGGNSGIAGNIPDELGDCK 219

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +S L +   K++                         +P ++G LS L  L ++   + 
Sbjct: 220 NLSVLGLADTKIS-----------------------GSLPASLGKLSMLQTLSIYSTMLS 256

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA---CQL 275
             IP  I  C  L   ++  N LS  LP E+GKL KL  + L  N       E    C+ 
Sbjct: 257 GEIPPEIGNCSELVNLFLYENGLSGSLPREIGKLQKLEKMLLWQNSFVGGIPEEIGNCR- 315

Query: 276 RLSVLDLSNNSLS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--- 331
            L +LD+S NS S G+P  +GK++ L +L+L+ N         ++G  P  L  L +   
Sbjct: 316 SLKILDVSLNSFSGGIPQSLGKLSNLEELMLSNNN--------ISGSIPKALSNLTNLIQ 367

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKEL------------SLEGMNLS------AI 372
            +L  N+ S +   +   +T  T       +L            SLE ++LS      ++
Sbjct: 368 LQLDTNQLSGSIPPELGSLTKLTMFFAWQNKLEGGIPSTLEGCRSLEALDLSYNALTDSL 427

Query: 373 PSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           P  +++   +TKL L  N I   +PPE+  C+SL  L L  N+I       +  L+SL+ 
Sbjct: 428 PPGLFKLQNLTKLLLISNDISGPIPPEIGKCSSLIRLRLVDNRISGEIPKEIGFLNSLNF 487

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EA 490
           L L  N L         +   LQ+L+LS N  S       SSL  L  L L       E 
Sbjct: 488 LDLSENHLTGSVPLEIGNCKELQMLNLSNNSLSGALPSYLSSLTRLDVLDLSMNNFSGEV 547

Query: 491 PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELVSV 543
           P  I +L  L  + LS+NS    IP      + L  LDLS N  S  +PPEL+ +
Sbjct: 548 PMSIGQLTSLLRVILSKNSFSGPIPSSLGQCSGLQLLDLSSNKFSGTIPPELLQI 602



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 220/488 (45%), Gaps = 57/488 (11%)

Query: 70  LTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM--KIPDEIGSATALVKFDCSSNQL 126
           L+VL ++  K+S  LPA++G+L ML++L + +++++  +IP EIG+ + LV      N L
Sbjct: 221 LSVLGLADTKISGSLPASLGKLSMLQTLSI-YSTMLSGEIPPEIGNCSELVNLFLYENGL 279

Query: 127 K-ELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
              LP  +G+   L       N+ +  +PE++ +C  +  LDV  N  +           
Sbjct: 280 SGSLPREIGKLQKLEKMLLWQNSFVGGIPEEIGNCRSLKILDVSLNSFS----------- 328

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 243
                        G+P+++G LS L  L L  N I  SIP ++S   +L +  +  N LS
Sbjct: 329 ------------GGIPQSLGKLSNLEELMLSNNNISGSIPKALSNLTNLIQLQLDTNQLS 376

Query: 244 A-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLS-GLPPEIGKMT 298
             +P ELG L+KL       N+L+      +E C+  L  LDLS N+L+  LPP + K+ 
Sbjct: 377 GSIPPELGSLTKLTMFFAWQNKLEGGIPSTLEGCR-SLEALDLSYNALTDSLPPGLFKLQ 435

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLPENEDSEASTTKEDLITMATR 354
            L KLLL  N         ++GP P  +      +R RL +N  S     +   +     
Sbjct: 436 NLTKLLLISND--------ISGPIPPEIGKCSSLIRLRLVDNRISGEIPKEIGFLNSLNF 487

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 413
           L ++   L+       ++P EI    E+  L+LS NS+   LP  LSS   L  L LS N
Sbjct: 488 LDLSENHLT------GSVPLEIGNCKELQMLNLSNNSLSGALPSYLSSLTRLDVLDLSMN 541

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 473
                    +  L+SL  + L  N               LQ+LDLS N  S    P    
Sbjct: 542 NFSGEVPMSIGQLTSLLRVILSKNSFSGPIPSSLGQCSGLQLLDLSSNKFSGTIPPELLQ 601

Query: 474 LPHLQ-ELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           +  L   L      L    P +I  L +L +LDLS N+L+     F  L +L  L++S N
Sbjct: 602 IEALDISLNFSHNALSGVVPPEISSLNKLSVLDLSHNNLEGDLMAFSGLENLVSLNISFN 661

Query: 532 NISALPPE 539
             +   P+
Sbjct: 662 KFTGYLPD 669



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 189/407 (46%), Gaps = 59/407 (14%)

Query: 152 LPEDLADCSKMSKLDVEGNKLT-VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            P  ++    + KL + G  LT V+S ++     ++   ++S +L+ G+P +IG L  L 
Sbjct: 90  FPSKISSFPFLQKLVISGANLTGVISIDIGNCLELVVLDLSSNSLVGGIPSSIGRLRNLQ 149

Query: 211 RLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKL------GTLDLHS 262
            L L+ N +   IPS I  C +L    + +N L+  LP ELGKLS L      G   +  
Sbjct: 150 NLSLNSNHLTGQIPSEIGDCVNLKTLDIFDNNLNGDLPVELGKLSNLEVIRAGGNSGIAG 209

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N   E  +  C+  LSVL L++  +SG LP  +GK++ L+ L        ++ S++++G 
Sbjct: 210 NIPDE--LGDCK-NLSVLGLADTKISGSLPASLGKLSMLQTL--------SIYSTMLSGE 258

Query: 322 TPALL----KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
            P  +    + +   L EN  S  S  +E       +L    K L  +   +  IP EI 
Sbjct: 259 IPPEIGNCSELVNLFLYENGLS-GSLPRE-----IGKLQKLEKMLLWQNSFVGGIPEEIG 312

Query: 378 EAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
               +  LD+S NS    +P  L   ++L+ L+LS N I       L++L++L  L+LD 
Sbjct: 313 NCRSLKILDVSLNSFSGGIPQSLGKLSNLEELMLSNNNISGSIPKALSNLTNLIQLQLDT 372

Query: 437 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDIL 495
           N L                        S+P  P   SL  L   +  + +L    P+ + 
Sbjct: 373 NQLS----------------------GSIP--PELGSLTKLTMFFAWQNKLEGGIPSTLE 408

Query: 496 RLQQLRILDLSQNSL-QSIPEGFKNLTSLTELDLSDNNISA-LPPEL 540
             + L  LDLS N+L  S+P G   L +LT+L L  N+IS  +PPE+
Sbjct: 409 GCRSLEALDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEI 455


>gi|312094637|ref|XP_003148090.1| sur-8-PB [Loa loa]
          Length = 380

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 84/416 (20%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I S+P  + D  ++++L +  NKL VL N  I +   L +L  S+N L  +P+T+ +L+R
Sbjct: 24  IVSIPSSIRDLVQLTELFLYKNKLAVLPNE-IGNLVNLKKLGLSENGLTSLPDTLAALTR 82

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N++  +P  I    SL   ++  N + ++ +E+G+L +L  +DL  N+++E 
Sbjct: 83  LETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRE- 141

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                                LPP IG++ +L   LL+ N LRT+               
Sbjct: 142 ---------------------LPPTIGQIKSLIVCLLSYNHLRTI--------------- 165

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                PE             I   + L+    +L L+  +L ++P  +     + +L + 
Sbjct: 166 -----PEE------------IGQCSELT----QLDLQHNDLVSLPEAMGNLQNLIRLGIR 204

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++ LP  ++ C  L+  I+  N+++  P+ +L SL +L  + L  N L   PS G +
Sbjct: 205 YNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQ 264

Query: 449 DIPMLQILDLSYN-IASLP----------------ENPPFSSLP-------HLQELYLRR 484
                  +++ +N IA +P                EN   +S+P        + EL L  
Sbjct: 265 QFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENA-LTSMPLDMGCWLAMTELNLST 323

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QLR  P D+ +L  L +L LS N L+ +P    +L  L ELDL +N + A+P E+
Sbjct: 324 NQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEI 379



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 181/382 (47%), Gaps = 64/382 (16%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+KL L+ N +  L + L  L  L  L++ HNKL ELP  I ++  L++L + +N I+
Sbjct: 58  VNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIV 117

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            I  EIG    L   D   N+++ELP ++G+  +L     S N + ++PE++  CS++++
Sbjct: 118 SIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQ 177

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +PE +G+L  LIRL +  N++  +PS
Sbjct: 178 LDLQHNDLV------------------------SLPEAMGNLQNLIRLGIRYNKLRHLPS 213

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
            ++ C  L EF + +N L ALP   L  L  L T++L  N+L  +     Q   S   ++
Sbjct: 214 GMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSIN 273

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N+++ +P  I  K T L KL L  N L ++                           
Sbjct: 274 MEHNAIAKIPFGIFSKATGLTKLNLKENALTSMP-------------------------- 307

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                   + M   L++T  EL+L    L  +P ++ +   +  L LS N +++LP ++ 
Sbjct: 308 --------LDMGCWLAMT--ELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIG 357

Query: 401 SCASLQTLILSRNKIKDWPDAI 422
           S   L+ L L  N++   P+ I
Sbjct: 358 SLKKLRELDLEENELDAIPNEI 379



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 9/275 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  +  ++  L  L ++++  NK+ ELP  IG++  L    +S+N
Sbjct: 101 YQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYN 160

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  IP+EIG  + L + D   N L  LP ++G   NL       N +  LP  +A C K
Sbjct: 161 HLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHK 220

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL----NGMPETIGSLSRLIRLDLHQN 217
           + +  VE N+L  L   ++AS   L  +  S+N L    +G P+   S    + +++  N
Sbjct: 221 LEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFAS---CVSINMEHN 277

Query: 218 RILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
            I  IP  I S    L +  +  NAL+++P ++G    +  L+L +NQL+    +  +L 
Sbjct: 278 AIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLV 337

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L VL LSNN L  LP +IG +  LR+L L  N L
Sbjct: 338 NLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENEL 372



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 195/449 (43%), Gaps = 92/449 (20%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + +  +P++I +L  L  L +  N +  +P+EIG+                  
Sbjct: 15  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGN------------------ 56

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
                 +NL     S N +TSLP+ LA  +++  LD+  NKL  L   +I   + L  L 
Sbjct: 57  -----LVNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELP-PVIYQISSLETLW 110

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N +  +   IG L RL  +DL +N+I  +P +I    SL    +  N L  +P E+G
Sbjct: 111 LRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIG 170

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           + S+                      L+ LDL +N L  LP  +G +  L +L +  N L
Sbjct: 171 QCSE----------------------LTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKL 208

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           R L S +      A    L   + E+   EA                       EGM L+
Sbjct: 209 RHLPSGM------AFCHKLEEFIVESNQLEALP---------------------EGM-LA 240

Query: 371 AIPSEIWEAGEITKLDLSRNSIQEL----PPELSSCASLQTLILSRNKIKDWPDAILTSL 426
           ++P+       +  ++LSRN +       P + +SC S+    +  N I   P  I +  
Sbjct: 241 SLPN-------LKTINLSRNELTVFPSGGPQQFASCVSIN---MEHNAIAKIPFGIFSKA 290

Query: 427 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 485
           + L+ L L  N L  +P D    + M + L+LS N +  LP++     L +L+ L L   
Sbjct: 291 TGLTKLNLKENALTSMPLDMGCWLAMTE-LNLSTNQLRVLPDD--VDKLVNLEVLVLSNN 347

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIP 514
            L++ P+ I  L++LR LDL +N L +IP
Sbjct: 348 MLKKLPSQIGSLKKLRELDLEENELDAIP 376



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 27/226 (11%)

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           +L++N++  + E++     LT L++ HN L  LP A+G L  L  L + +N +  +P  +
Sbjct: 156 LLSYNHLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGM 215

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLP----EDLADC------ 159
                L +F   SNQL+ LP  +   L NL     S N +T  P    +  A C      
Sbjct: 216 AFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINME 275

Query: 160 ---------------SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
                          + ++KL+++ N LT +  ++   W  +TEL  S N L  +P+ + 
Sbjct: 276 HNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDM-GCWLAMTELNLSTNQLRVLPDDVD 334

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            L  L  L L  N +  +PS I     L E  +  N L A+P E+G
Sbjct: 335 KLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIG 380



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E T+LDLS + I  +P  +     L  L L +NK+   P+ I  +L +L  L L  N L 
Sbjct: 13  EETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEI-GNLVNLKKLGLSENGLT 71

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P D    +  L+ LDL +N +  LP  P    +  L+ L+LR  ++    ++I RL++
Sbjct: 72  SLP-DTLAALTRLETLDLRHNKLCELP--PVIYQISSLETLWLRYNRIVSIGSEIGRLKR 128

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+++DL +N ++ +P     + SL    LS N++  +P E+
Sbjct: 129 LKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEI 169



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 12/122 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S+N+ + ++  +P  ++             +A  L KL L  N +  +  D+     +T 
Sbjct: 271 SINMEHNAIAKIPFGIFS------------KATGLTKLNLKENALTSMPLDMGCWLAMTE 318

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N+L  LP  + +L  L+ L +S N + K+P +IGS   L + D   N+L  +P+ 
Sbjct: 319 LNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNE 378

Query: 133 LG 134
           +G
Sbjct: 379 IG 380


>gi|224145839|ref|XP_002325782.1| predicted protein [Populus trichocarpa]
 gi|222862657|gb|EEF00164.1| predicted protein [Populus trichocarpa]
          Length = 1018

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 229/515 (44%), Gaps = 79/515 (15%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFN 101
           E +DL  + L  N    + + +++L  L+ LN S N   S LP  +G L  LK++DVS N
Sbjct: 79  ERLDLSNMNLTGN----VSDHIQDLHSLSFLNFSCNGFDSSLPRELGTLTSLKTIDVSQN 134

Query: 102 SIM-KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLS--DFKASNNCITSLPEDLA 157
           + +   P  +G A+ L   + SSN     LP  LG   +L   DF+ S     S+P    
Sbjct: 135 NFVGSFPTGLGMASGLTSVNASSNNFSGYLPEDLGNATSLESLDFRGSF-FEGSIPGSFK 193

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQ 216
           +  K+  L + GN LT      I     L  +I   N   G +PE IG+L+ L  LDL  
Sbjct: 194 NLQKLKFLGLSGNNLTGRIPREIGQLASLETIILGYNEFEGEIPEEIGNLTNLRYLDLAV 253

Query: 217 NRILS-IPSSISGCCSLAEFYM-GNNALSALPAELGKLSKLGTLDLHSNQLK-EYCVEAC 273
             +   IP+ +     L   Y+  NN    +P ELG  + L  LDL  NQ+  E  VE  
Sbjct: 254 GSLSGQIPAELGRLKQLTTVYLYKNNFTGQIPPELGDATSLVFLDLSDNQISGEIPVELA 313

Query: 274 QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           +L+ L +L+L  N L G +P ++G++T L  L L  N                   +L  
Sbjct: 314 ELKNLQLLNLMRNQLKGTIPTKLGELTKLEVLELWKN-------------------FLTG 354

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            LPEN    +             L V+S  LS E      IP  +  +G +TKL L  NS
Sbjct: 355 PLPENLGQNSPLQ---------WLDVSSNSLSGE------IPPGLCHSGNLTKLILFNNS 399

Query: 392 IQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSD-GFK 448
               +P  LS+C SL  + +  N I       L SL  L  L+L NN L  Q+P D G  
Sbjct: 400 FSGPIPMSLSTCESLVRVRMQNNLISGTIPVGLGSLPMLQRLELANNNLTGQIPDDIGLS 459

Query: 449 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 508
               L  +D+S N              HLQ            P  IL +  L+I   S N
Sbjct: 460 T--SLSFIDVSGN--------------HLQS---------SLPYSILSIPSLQIFMASNN 494

Query: 509 SLQS-IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +L+  IP+ F++  SLT LDLS N++S   PE ++
Sbjct: 495 NLEGQIPDQFQDCPSLTLLDLSSNHLSGKIPESIA 529



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 52/270 (19%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L KLIL +N+    +   L     L  + + +N +S  +P  +G L ML+ L+++ N++
Sbjct: 389 NLTKLILFNNSFSGPIPMSLSTCESLVRVRMQNNLISGTIPVGLGSLPMLQRLELANNNL 448

Query: 104 M-KIPDEIGSATALVKFDCSSNQLKE-LPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             +IPD+IG +T+L   D S N L+  LP S+    +L  F ASNN +   +P+   DC 
Sbjct: 449 TGQIPDDIGLSTSLSFIDVSGNHLQSSLPYSILSIPSLQIFMASNNNLEGQIPDQFQDCP 508

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ LD+  N L+                         +PE+I S  +L+ L+L  N+  
Sbjct: 509 SLTLLDLSSNHLS-----------------------GKIPESIASCEKLVNLNLKNNQFT 545

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
             IP +IS   +LA   + NN+L   +P   G    L TL+L                  
Sbjct: 546 GEIPKAISTMPTLAILDLSNNSLVGRIPENFGNSPALETLNL------------------ 587

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
               S N L G  P  G +TT+    L GN
Sbjct: 588 ----SFNKLEGPVPSNGMLTTINPNDLVGN 613


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 191/436 (43%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L    LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLRQLTYLDVSKNNIEMVEEGISTCE-NLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L         P  +  LRS                            +EL     
Sbjct: 286 NQLMYL---------PDSIGGLRS---------------------------IEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS + +   I       N +Q+LPPE+ +  ++  L L  NK++  P+  +  + 
Sbjct: 310 EIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 204/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLRQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ  +LS N ++  PD I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S+N I +LP +                     P   +  ++  L+L  
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 24/194 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L    +S N L +LP  IG L  + +L +  N +M +
Sbjct: 232 LTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+++ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 292 PDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 227 SGCCSLAEFYMGNN 240
           +    L   ++ +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ  +L+ N++++L + + +L  +T L +  N+L  LP +IG L  ++ LD SFN I  
Sbjct: 254 NLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 374 NLSDNRL----KNLPFSFTKLQQLTA 395



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +  LS N++  LP
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 195/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G+  +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGECESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 150/356 (42%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L  LS LK+D N L Q+P                                 L EL L  
Sbjct: 264 KLKKLSILKVDQNRLTQLPE-------------------------AVGECESLTELVLTE 298

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QL   P  I +L++L  L+  +N L S+P+      SLT   + DN ++ +P E+
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|291238114|ref|XP_002738976.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1478

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 179/356 (50%), Gaps = 42/356 (11%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEA--------VDLQKLI 51
           D + + AR+   L L    LR++    ++  N  + G  D   EA        ++L +L 
Sbjct: 30  DDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMNLIELD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I ++ E+++    L V + S N +S+LP    +L  L  L ++  S+ ++P +IG
Sbjct: 90  ISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRLPPDIG 149

Query: 112 SATALV---------KF--------------DCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           S + L+         KF              D  SN+L+ELP +LG   NL +     N 
Sbjct: 150 SLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMELWLDCNE 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP ++ + SK+  LDV  N+L  L    I     LT+L  S+N +  +PE IG+L +
Sbjct: 210 LTELPAEIGNLSKLMCLDVSENRLESLPEE-IGGLGNLTDLHLSQNCIERLPEGIGNLKQ 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           +  L + QNR++++ ++I  C  L E  +  N L  LPA +G L KL  L++  N+LK  
Sbjct: 269 MTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATIGLLKKLNNLNVDRNRLKSV 328

Query: 269 CVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-----PLRTLRSSL 317
            +E   C  +L VL L  N L+ +P EIG +  L  L L+GN     PLR  + +L
Sbjct: 329 PIELGRCH-KLGVLSLRENMLTEIPSEIGSLKELHVLDLSGNRIEYLPLRIAQCNL 383



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N+L ELP  +G L  L  L +  N + ++P EIG+ + L+  D S N+L+ L
Sbjct: 177 LEQLDLGSNELEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESL 236

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+D   S NCI  LPE + +  +M+ L ++ N+L  L+   I S   L EL
Sbjct: 237 PEEIGGLGNLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALT-AAIGSCECLQEL 295

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           I ++NLL  +P TIG L +L  L++ +NR+ S+P  +  C  L    +  N L+ +P+E+
Sbjct: 296 ILTENLLQELPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEI 355

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           G L +L  LDL  N+++   +   Q  L  L LS N
Sbjct: 356 GSLKELHVLDLSGNRIEYLPLRIAQCNLKALWLSEN 391



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 184/388 (47%), Gaps = 40/388 (10%)

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           H N+  + +D+ R    L  L +  N+L EL      L  ++ L +S N I  +P E+G+
Sbjct: 22  HCNLTMIPDDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGN 81

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              L++ D S N + E+P ++  C  L     S N I+ LP+       ++ L +    L
Sbjct: 82  FMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSL 141

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  + I S + L  L   +NLL  +P ++  L +L +LDL  N +  +P ++    +L
Sbjct: 142 TRLPPD-IGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNL 200

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK------------------EYCVEACQ 274
            E ++  N L+ LPAE+G LSKL  LD+  N+L+                  + C+E   
Sbjct: 201 MELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNLTDLHLSQNCIERLP 260

Query: 275 ------LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                  ++++L +  N L  L   IG    L++L+LT N L+ L +++       LLK 
Sbjct: 261 EGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATI------GLLKK 314

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L +    N D     +    +    +L V    LSL    L+ IPSEI    E+  LDLS
Sbjct: 315 LNNL---NVDRNRLKSVPIELGRCHKLGV----LSLRENMLTEIPSEIGSLKELHVLDLS 367

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIK 416
            N I+ LP  ++ C +L+ L LS N+ +
Sbjct: 368 GNRIEYLPLRIAQC-NLKALWLSENQAQ 394



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 191/415 (46%), Gaps = 54/415 (13%)

Query: 135 RCLNLSDFKASN---------NC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASW 183
           RC+ L  F+A N         +C +T +P+D+   ++ + +L ++ N+L  L N      
Sbjct: 3   RCIPL--FRACNRQVDIIERRHCNLTMIPDDVYRYARSLEELYLDANQLREL-NRPFFRL 59

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             + +L  S N +  +P  +G+   LI LD+ +N I+ IP +I  C  L       N +S
Sbjct: 60  LNIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPIS 119

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP    +L  L  L              C        L++ SL+ LPP+IG ++ L  L
Sbjct: 120 KLPDGFTQLRDLTHL--------------C--------LNDVSLTRLPPDIGSLSNLITL 157

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+ L +SL       L+K  +  L  NE  E   T   L  +         EL 
Sbjct: 158 ELRENLLKFLPTSL-----SFLVKLEQLDLGSNELEELPETLGALPNLM--------ELW 204

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           L+   L+ +P+EI    ++  LD+S N ++ LP E+    +L  L LS+N I+  P+ I 
Sbjct: 205 LDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNLTDLHLSQNCIERLPEGI- 263

Query: 424 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYL 482
            +L  ++ LK+D N L  + +        LQ L L+ N+  L E P     L  L  L +
Sbjct: 264 GNLKQMTILKIDQNRLVALTA-AIGSCECLQELILTENL--LQELPATIGLLKKLNNLNV 320

Query: 483 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            R +L+  P ++ R  +L +L L +N L  IP    +L  L  LDLS N I  LP
Sbjct: 321 DRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVLDLSGNRIEYLP 375



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N IE+L E + NL  +T+L +  N+L  L AAIG    L+ L ++ N + +
Sbjct: 245 NLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQE 304

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L   +   N+LK +P  LGRC  L       N +T +P ++    ++  L
Sbjct: 305 LPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVL 364

Query: 166 DVEGNK-----LTVLSNNLIASW 183
           D+ GN+     L +   NL A W
Sbjct: 365 DLSGNRIEYLPLRIAQCNLKALW 387



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R + + +EL L+   L  +    +    I KL LS N I+ LPPE+ +  +L  L +SRN
Sbjct: 34  RYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMNLIELDISRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY---NIASLPENPP 470
            I + P+ I      L       NP+ ++P DGF      Q+ DL++   N  SL   PP
Sbjct: 94  DIMEIPENI-KFCKKLQVCDFSGNPISKLP-DGF-----TQLRDLTHLCLNDVSLTRLPP 146

Query: 471 -FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 529
              SL +L  L LR   L+  PT +  L +L  LDL  N L+ +PE    L +L EL L 
Sbjct: 147 DIGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMELWLD 206

Query: 530 DNNISALPPEL 540
            N ++ LP E+
Sbjct: 207 CNELTELPAEI 217



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD +     SL  L LD N LR++    F+ +  ++ L LS N I +LP  P   +  +L
Sbjct: 29  PDDVYRYARSLEELYLDANQLRELNRPFFR-LLNIRKLGLSDNEIEALP--PEVGNFMNL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + E P +I   ++L++ D S N +  +P+GF  L  LT L L+D +++ LP
Sbjct: 86  IELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRLP 145

Query: 538 PELVSV 543
           P++ S+
Sbjct: 146 PDIGSL 151


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 8/273 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + 
Sbjct: 151 ANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLT 210

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP E+GS   L+  D S N+++ LP  LG  L+L+D   S N I +LPE +    K+S 
Sbjct: 211 EIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSI 270

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L  + N+LT L  + I +   LTEL+ ++N +  +P +IG L +L   +  +N++ S+P 
Sbjct: 271 LKADQNRLTYLPES-IGNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPK 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-----C--QLRL 277
            I GC SL  F +  N L+ +P+EL + ++L  LD+  N+    C  A     C  +  L
Sbjct: 330 EIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRKVHCCPHANMRPLCPNRFHL 389

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L    +  +  P ++    T + L+  G P+
Sbjct: 390 PFLLFFRSFQAAKPADLSDHATPQGLVAVGEPV 422



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 176/394 (44%), Gaps = 71/394 (18%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL  VP+E+Y+           +E   L++L+L  N +  L +   +L  L  L +S N+
Sbjct: 23  SLLFVPDEIYR-----------YER-SLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNE 70

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR---- 135
           +  +P  I     L  LDVS N IM+IP+ I   +AL   D S N L  LP S  +    
Sbjct: 71  IQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNL 130

Query: 136 -CLNLSD------------------FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            CL+++D                   +   N +T LPE L+   ++ +LD+  N+L  L 
Sbjct: 131 TCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLP 190

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            + I     L +L    N L  +P  +GS+  L+ LD+ +N+I  +P  + G  SLA+  
Sbjct: 191 ES-IGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLL 249

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +  N + ALP  +GKL K                      LS+L    N L+ LP  IG 
Sbjct: 250 VSQNLIDALPESIGKLRK----------------------LSILKADQNRLTYLPESIGN 287

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
             +L +L+LT N +++L  S+  G    L  +       N D    T+    I     L+
Sbjct: 288 CESLTELVLTENKIQSLPRSI--GKLKQLFNF-------NCDRNQLTSLPKEIGGCQSLN 338

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           V      +    L+ IPSE+ +A E+  LD+S N
Sbjct: 339 V----FCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 161/349 (46%), Gaps = 22/349 (6%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L +LP     L  L+ L +S N I +IP EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCS 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE       ++ L +    L VL  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPKLRNLTCLSINDISLQVLPEN-IGNLANLVSLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE++  L RL  LDL  N + S+P SI     L + ++  N L+ +PAE+G +  L
Sbjct: 163 LTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL--SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             LD+  N+++    E   L LS+ DL  S N +  LP  IGK+  L  L    N L  L
Sbjct: 223 LCLDVSENKIERLPEELGGL-LSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYL 281

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
             S+ N  +   L      L EN+      +   L  +           + +   L+++P
Sbjct: 282 PESIGNCESLTELV-----LTENKIQSLPRSIGKLKQLFN--------FNCDRNQLTSLP 328

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDA 421
            EI     +    +  N +  +P ELS    L  L +S N K+   P A
Sbjct: 329 KEIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRKVHCCPHA 377



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 153/350 (43%), Gaps = 23/350 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  IP  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +   S L   D   N L        +LR L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L  L  SL      ++L  L          E      +L ++   +   V  K+L
Sbjct: 158 LRENLLTFLPESL------SMLHRL---------EELDLGNNELYSLPESIGHLVGLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L+G  L+ IP+E+     +  LD+S N I+ LP EL    SL  L++S+N I   P++I
Sbjct: 203 WLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESI 262

Query: 423 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 481
              L  LS LK D N L  +P +   +   L  L L+ N I SLP +     L  L    
Sbjct: 263 -GKLRKLSILKADQNRLTYLP-ESIGNCESLTELVLTENKIQSLPRS--IGKLKQLFNFN 318

Query: 482 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             R QL   P +I   Q L +  + +N L  IP      T L  LD+S N
Sbjct: 319 CDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 136/309 (44%), Gaps = 42/309 (13%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 289
           SL E  +  N L  LP +   L KL  L L  N+++    E A  + L  LD+S N +  
Sbjct: 37  SLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIME 96

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P  I   + L+    +GNPL                    +RLPE+     + T     
Sbjct: 97  IPESISFCSALQVADFSGNPL--------------------TRLPESFPKLRNLTC---- 132

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                       LS+  ++L  +P  I     +  L+L  N +  LP  LS    L+ L 
Sbjct: 133 ------------LSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELD 180

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 468
           L  N++   P++I   L  L  L LD N L ++P++    +  L  LD+S N I  LPE 
Sbjct: 181 LGNNELYSLPESI-GHLVGLKDLWLDGNQLTEIPAE-MGSMKNLLCLDVSENKIERLPEE 238

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L  L +L + +  +   P  I +L++L IL   QN L  +PE   N  SLTEL L
Sbjct: 239 --LGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVL 296

Query: 529 SDNNISALP 537
           ++N I +LP
Sbjct: 297 TENKIQSLP 305



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 7/192 (3%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R   + +EL L+   L  +P + +   ++ KL LS N IQ +PPE+++   L  L +SRN
Sbjct: 33  RYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRN 92

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPF 471
            I + P++I +  S+L       NPL ++P      +++  L I D+S  +  LPEN   
Sbjct: 93  DIMEIPESI-SFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQV--LPEN--I 147

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
            +L +L  L LR   L   P  +  L +L  LDL  N L S+PE   +L  L +L L  N
Sbjct: 148 GNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGN 207

Query: 532 NISALPPELVSV 543
            ++ +P E+ S+
Sbjct: 208 QLTEIPAEMGSM 219



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 63/289 (21%)

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C   + V+D  + SL  +P EI +   +L +LLL  N LR L         P    +L  
Sbjct: 10  CNRHVEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDL---------PKQFFHL-- 58

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                    V  ++L L    +  IP EI    E+ +LD+SRN 
Sbjct: 59  -------------------------VKLRKLGLSDNEIQRIPPEIANFMELVELDVSRND 93

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS------- 444
           I E+P  +S C++LQ    S N +   P++    L +L+CL +++  L+ +P        
Sbjct: 94  IMEIPESISFCSALQVADFSGNPLTRLPES-FPKLRNLTCLSINDISLQVLPENIGNLAN 152

Query: 445 ---------------DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
                          +    +  L+ LDL  N + SLPE+     L  L++L+L   QL 
Sbjct: 153 LVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPES--IGHLVGLKDLWLDGNQLT 210

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           E P ++  ++ L  LD+S+N ++ +PE    L SL +L +S N I ALP
Sbjct: 211 EIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALP 259



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R ++ L  L L  N L+ +P+ F +L  L +L LSDN I 
Sbjct: 13  HVEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            +PPE+ + 
Sbjct: 73  RIPPEIANF 81


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 196/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  +G +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETVGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+               L   E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYLPDSI-------------GGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     +T L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPGEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 200/452 (44%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ +  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETV-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N I +LP +     L +++        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEIEALPSS--VGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 159/342 (46%), Gaps = 51/342 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           +GSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 VGSLKNVTTLKIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPGEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALL--KYLRSRLPENED 338
            L  + L+ N +  L   + +  T  ++   Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQVSIL---IFDSETQKMVLTNYMFPQQPRTED 430



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
          Length = 1616

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 59/365 (16%)

Query: 13  SLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLK 61
           S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L 
Sbjct: 16  SVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 182 --------------------------------SWTMLTELIA-------------SKNLL 196
                                           S   L EL A             S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 65/371 (17%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEA-----------------------CQLR-LSVLDLSNNSLSGLP 291
             LD+  N+L+E   E                         QL+ LS+L +  N L  +P
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVP 282

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG    L +L+LT N L  L  SL                               +T 
Sbjct: 283 EAIGDCENLSELILTENLLTALPHSLGK-----------------------------LTK 313

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T L+V    L +       +P EI     ++ L L  N +  LPPEL+  A L  L ++
Sbjct: 314 LTNLNVDRNHLEV-------LPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVA 366

Query: 412 RNKIKDWPDAI 422
            N+++  P A+
Sbjct: 367 GNRLRSLPFAL 377



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 190/450 (42%), Gaps = 109/450 (24%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 74  LPPEVANFMQLVELDV------------------------SRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKS---- 165

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                             LP  +  +  L +L L GN L  L  +L  G  P L      
Sbjct: 166 ------------------LPASLSFLVKLEQLDLGGNDLEVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LSA+P E+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSALPPELGNLRRLVCLDVSENR 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ELP EL     L  L+LS+N ++  PD I   L  LS LK+D N L +VP +   D  
Sbjct: 232 LEELPAELGGLVLLTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVP-EAIGDCE 289

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
            L  L L+ N+         ++LPH                 + +L +L  L++ +N L+
Sbjct: 290 NLSELILTENL--------LTALPH----------------SLGKLTKLTNLNVDRNHLE 325

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELV 541
            +P       +L+ L L DN ++ LPPEL 
Sbjct: 326 VLPPEIGGCVALSVLSLRDNRLAVLPPELA 355



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L+  P +I R  + L  L L  N L+ +P+ F  L +L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQ 72

Query: 535 ALPPELV 541
            LPPE+ 
Sbjct: 73  RLPPEVA 79


>gi|320166678|gb|EFW43577.1| hypothetical protein CAOG_01621 [Capsaspora owczarzaki ATCC 30864]
          Length = 697

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 234/530 (44%), Gaps = 100/530 (18%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +AVDL K       +++L   +  L  +  L+VS+N+LS LP  IG L  LK LD+S N+
Sbjct: 16  QAVDLSK-----QQLKELNPAIERLERVEKLDVSNNELSSLPLEIGVLRTLKVLDISHNN 70

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELP--SSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           +  +P EIG+  AL     S N+L   P   ++GR + L+      N +  LP++     
Sbjct: 71  LNALPQEIGNLVALTHLHASHNRLFYSPLTKAIGRLVMLTRIDLGFNQLEDLPDEFGHLR 130

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  +D+  N L ++                        P  +  ++ L  L+L QN+I 
Sbjct: 131 NLKYIDLSNNDLKII------------------------PVCVCKIAGLEYLNLEQNKIK 166

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSV 279
            +P  I    SL E+ + NN ++ LPAE+G LSKL  + L  N L+E    A + + +  
Sbjct: 167 LVPPEIGQLTSLKEWLLNNNNINKLPAEVGSLSKLVKVTLAFNNLRELPKAAGEWVDIEE 226

Query: 280 LDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           LDL  NN++  LP        LRKLL+    L  L +                       
Sbjct: 227 LDLRENNNMVELPATSQLWKKLRKLLMRNTKLEKLPAGF--------------------- 265

Query: 339 SEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                      +  TRL+    EL L +   L  IP +I +   +T+LDLS   +  LP 
Sbjct: 266 -----------SAWTRLN----ELELKDNPQLQEIPEDIGQLNSLTRLDLSSCCLTTLPD 310

Query: 398 ELS-------------------------SCASLQTLILSRNKIKDWPDAILTSLSSLSCL 432
            ++                         +  S++ L L  N+I+  PD +L  + SL  L
Sbjct: 311 SVAQLTQLQLLDLRQNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPDDVL-EIKSLVEL 369

Query: 433 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 491
            + +N +  + +D  + + ML  L LS+N + SLP +     L +LQ L +R  QL   P
Sbjct: 370 DMSSNTMYSL-ADDIRKLTMLTKLSLSFNALESLPAS--IGMLTNLQTLEVRNNQLSALP 426

Query: 492 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
            +I  L+ L  LD+S N +  +P     L++L  LD S N +   P +++
Sbjct: 427 DEIGDLRSLIKLDVSNNKISKLPTSMCQLSALQTLDTSHNQLVEPPADII 476



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 42/390 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D++    +L+ + L++N+++ +   +  +  L  LN+  NK+  +P  IG+L  LK   +
Sbjct: 124 DEFGHLRNLKYIDLSNNDLKIIPVCVCKIAGLEYLNLEQNKIKLVPPEIGQLTSLKEWLL 183

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK-ASNNCITSLPEDLA 157
           + N+I K+P E+GS + LVK   + N L+ELP + G  +++ +     NN +  LP    
Sbjct: 184 NNNNINKLPAEVGSLSKLVKVTLAFNNLRELPKAAGEWVDIEELDLRENNNMVELPATSQ 243

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN-LLNGMPETIGSLSRLIRLDLHQ 216
              K+ KL +   KL  L     ++WT L EL    N  L  +PE IG L+ L RLDL  
Sbjct: 244 LWKKLRKLLMRNTKLEKLPAGF-SAWTRLNELELKDNPQLQEIPEDIGQLNSLTRLDLSS 302

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSA--LPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             + ++P S++    L    +  N L+   +P  +  +  +  L L  N+++    +  +
Sbjct: 303 CCLTTLPDSVAQLTQLQLLDLRQNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPDDVLE 362

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           ++ L  LD+S+N++  L  +I K+T L KL L+ N L +L +S                 
Sbjct: 363 IKSLVELDMSSNTMYSLADDIRKLTMLTKLSLSFNALESLPAS----------------- 405

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                          I M T L    + L +    LSA+P EI +   + KLD+S N I 
Sbjct: 406 ---------------IGMLTNL----QTLEVRNNQLSALPDEIGDLRSLIKLDVSNNKIS 446

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           +LP  +   ++LQTL  S N++ + P  I+
Sbjct: 447 KLPTSMCQLSALQTLDTSHNQLVEPPADII 476



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 147/328 (44%), Gaps = 46/328 (14%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI 294
           MGN A      +  KL     +DL   QLKE    +E  + R+  LD+SNN LS LP EI
Sbjct: 1   MGNTA----DKQFSKLKSQQAVDLSKQQLKELNPAIERLE-RVEKLDVSNNELSSLPLEI 55

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G + TL+ L ++ N L  L   + N      L    +RL  +  ++A       + M TR
Sbjct: 56  GVLRTLKVLDISHNNLNALPQEIGNLVALTHLHASHNRLFYSPLTKAIGR----LVMLTR 111

Query: 355 LSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           + +        G N L  +P E      +  +DLS N ++ +P  +   A L+ L L +N
Sbjct: 112 IDL--------GFNQLEDLPDEFGHLRNLKYIDLSNNDLKIIPVCVCKIAGLEYLNLEQN 163

Query: 414 KIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           KIK  P  I                      + SLS L  + L  N LR++P    + + 
Sbjct: 164 KIKLVPPEIGQLTSLKEWLLNNNNINKLPAEVGSLSKLVKVTLAFNNLRELPKAAGEWVD 223

Query: 452 MLQILDLSYNIASLPENPPFSSL-PHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-S 509
            ++ LDL  N  ++ E P  S L   L++L +R  +L + P       +L  L+L  N  
Sbjct: 224 -IEELDLREN-NNMVELPATSQLWKKLRKLLMRNTKLEKLPAGFSAWTRLNELELKDNPQ 281

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALP 537
           LQ IPE    L SLT LDLS   ++ LP
Sbjct: 282 LQEIPEDIGQLNSLTRLDLSSCCLTTLP 309



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           + +RN+  +  L +  N++  +P  + E+  L  LD+S N++  + D+I   T L K   
Sbjct: 335 QGMRNMQSMKKLYLQENRIEIVPDDVLEIKSLVELDMSSNTMYSLADDIRKLTMLTKLSL 394

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N L+ LP+S+G   NL   +  NN +++LP+++ D   + KLDV  NK++ L  ++  
Sbjct: 395 SFNALESLPASIGMLTNLQTLEVRNNQLSALPDEIGDLRSLIKLDVSNNKISKLPTSM-C 453

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             + L  L  S N L   P  I      + L   + + + +  ++ G   L  F MG +A
Sbjct: 454 QLSALQTLDTSHNQLVEPPADIIKDGLAVILQYLRTKHVVVALAL-GAVFLHSFPMGYHA 512

Query: 242 LSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
                A  G +  +   LD   +Q +   ++   + + +    NN+      + G+ T  
Sbjct: 513 RMVFYALQGFRRGRFSRLDEPVSQEQRVLIDDLDINIHM----NNARYNQYADYGRYTWC 568

Query: 301 RKLLLTGNPLRTLRSSLVNG 320
            ++L   +  +T R  + NG
Sbjct: 569 CRVLGKFSLFKTYR--IANG 586



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           + KLD+S N +  LP E+    +L+ L +S N +   P  I  +L +L+ L   +N L  
Sbjct: 38  VEKLDVSNNELSSLPLEIGVLRTLKVLDISHNNLNALPQEI-GNLVALTHLHASHNRLFY 96

Query: 442 VP-SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            P +     + ML  +DL +N +  LP+   F  L +L+ + L    L+  P  + ++  
Sbjct: 97  SPLTKAIGRLVMLTRIDLGFNQLEDLPDE--FGHLRNLKYIDLSNNDLKIIPVCVCKIAG 154

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L  L+L QN ++ +P     LTSL E  L++NNI+ LP E+ S+
Sbjct: 155 LEYLNLEQNKIKLVPPEIGQLTSLKEWLLNNNNINKLPAEVGSL 198



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           FS L   Q + L + QL+E    I RL+++  LD+S N L S+P     L +L  LD+S 
Sbjct: 9   FSKLKSQQAVDLSKQQLKELNPAIERLERVEKLDVSNNELSSLPLEIGVLRTLKVLDISH 68

Query: 531 NNISALPPEL 540
           NN++ALP E+
Sbjct: 69  NNLNALPQEI 78


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 70/433 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   +++  + SL  VP+EVY+             A  L++L+L  N + +L E   
Sbjct: 1   RCNRHVETIDRRHCSLLYVPDEVYRY------------ARSLEELLLDANQLRELPEQFF 48

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 49  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 108

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 109 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 168

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 169 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 228

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  LP  +GKL K                      LS+L + 
Sbjct: 229 EEISGLTSLTDLVISQNLLEMLPDGIGKLKK----------------------LSILKVD 266

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 267 QNRLTQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSL 319

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+  A E+  LD++ N +  LP  L++  
Sbjct: 320 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTA-L 372

Query: 404 SLQTLILSRNKIK 416
           +L+ L LS N+ +
Sbjct: 373 NLKALWLSDNQAQ 385



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 30  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 89

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 90  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 149

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 150 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 196

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 197 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGI-G 255

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 256 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 312

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP        L  LD++ N +S LP  L ++
Sbjct: 313 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL 372



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD +     SL  L LD N LR++P   F+ +  L+ L LS N I  LP  P  ++   L
Sbjct: 20  PDEVYRYARSLEELLLDANQLRELPEQFFQ-LVKLRKLGLSDNEIQRLP--PEIANFMQL 76

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + E P  I   + L+I D S N L  +PE F  L +LT L ++D ++ +LP
Sbjct: 77  VELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLP 136



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P ++ R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 5   HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 64

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 65  RLPPEIANF 73


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 141/293 (48%), Gaps = 25/293 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L+ N +  L + +  L  L+ L +SHN ++ LP AI +L  L SLD+S+N I  +
Sbjct: 50  LEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTL 109

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD I     L   + S N++  LP ++ +  NL+    S N I +LP+ +A    ++ L+
Sbjct: 110 PDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLN 169

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN++T L                        P+ I  L  L  LDL  NRI ++P +I
Sbjct: 170 LNGNRITTL------------------------PDAIAKLHNLTSLDLSGNRITTLPDAI 205

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           +   +L    + NN ++ LP  + KL  L +LDL  N++        +L+ LS LDL  N
Sbjct: 206 AKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGN 265

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            ++ LP  I ++  L  L L  NP+      +V     A+  Y R    E  D
Sbjct: 266 EITTLPDAIAQLHNLTSLDLRRNPIEKPPLEVVKKGIEAIRDYFRQLEAEGTD 318



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 126/229 (55%), Gaps = 1/229 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+HN I  L + +  L  L  L++S+N ++ LP AI +LH L +L++S N I  
Sbjct: 72  NLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD I     L   + S N+++ LP ++ +  NL+    + N IT+LP+ +A    ++ L
Sbjct: 132 LPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ GN++T L  + IA    LT L    N +  +P+ I  L  L  LDL  NRI ++P +
Sbjct: 192 DLSGNRITTLP-DAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDA 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           I+   +L+   +  N ++ LP  + +L  L +LDL  N +++  +E  +
Sbjct: 251 IAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLDLRRNPIEKPPLEVVK 299



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 24/315 (7%)

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           K+ L  +P  + +L+ L  LDL +N + ++P +I+   +L+  Y+ +N ++ LP  + +L
Sbjct: 34  KDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQL 93

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L +LDL  N +        +L  L+ L+LS N ++ LP  I K+  L  L L+ N +R
Sbjct: 94  QNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIR 153

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL         P  +  L +    N +    TT  D I     L+     L L G  ++ 
Sbjct: 154 TL---------PDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLT----SLDLSGNRITT 200

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P  I +   +T L L  N I  LP  ++   +L +L LS N+I   PDAI   L +LS 
Sbjct: 201 LPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAI-AKLQNLST 259

Query: 432 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL---YLRRMQLR 488
           L L  N +  +P D    +  L  LDL  N     E PP   +    E    Y R  QL 
Sbjct: 260 LDLRGNEITTLP-DAIAQLHNLTSLDLRRNPI---EKPPLEVVKKGIEAIRDYFR--QLE 313

Query: 489 EAPTDILRLQQLRIL 503
              TD L   +L I+
Sbjct: 314 AEGTDYLYEAKLLII 328



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 134/275 (48%), Gaps = 25/275 (9%)

Query: 271 EACQLRLSVLDLSNN-------SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           EA + RL  LDL N+        L+ +P E+  +T L +L L+ N + TL  ++      
Sbjct: 14  EAKEKRLIKLDLRNDWGTPDKDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNL 73

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           + L YL             TT  D I     L+  S +LS  G  ++ +P  I +   +T
Sbjct: 74  STL-YL--------SHNGITTLPDAIAQLQNLN--SLDLSYNG--ITTLPDAIAKLHNLT 120

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
            L+LS N I  LP  ++   +L TL LS N+I+  PDAI   L +L+ L L+ N +  +P
Sbjct: 121 TLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAI-AKLHNLTSLNLNGNRITTLP 179

Query: 444 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 502
            D    +  L  LDLS N I +LP+    + L +L  L L    +   P  I +L  L  
Sbjct: 180 -DAIAKLHNLTSLDLSGNRITTLPD--AIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTS 236

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           LDLS N + ++P+    L +L+ LDL  N I+ LP
Sbjct: 237 LDLSGNRITTLPDAIAKLQNLSTLDLRGNEITTLP 271



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 143/342 (41%), Gaps = 70/342 (20%)

Query: 208 RLIRLDLH-------QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           RLI+LDL        ++++  IP+ +     L E  +  N ++ LP  + KL  L T   
Sbjct: 19  RLIKLDLRNDWGTPDKDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLST--- 75

Query: 261 HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
                              L LS+N ++ LP  I ++  L  L L+ N + TL       
Sbjct: 76  -------------------LYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTL------- 109

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
             P  +  L +    N      TT  D I     L+     L+L    +  +P  I +  
Sbjct: 110 --PDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTT----LNLSVNRIRTLPDAIAKLH 163

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            +T L+L+ N I  LP  ++   +L +L LS N+I   PDAI   L +L+ L L NN + 
Sbjct: 164 NLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAI-AKLHNLTSLSLWNNGIT 222

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P D    +  L  LDLS N I +LP+                          I +LQ 
Sbjct: 223 TLP-DAIAKLHNLTSLDLSGNRITTLPDA-------------------------IAKLQN 256

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           L  LDL  N + ++P+    L +LT LDL  N I   P E+V
Sbjct: 257 LSTLDLRGNEITTLPDAIAQLHNLTSLDLRRNPIEKPPLEVV 298


>gi|302809400|ref|XP_002986393.1| hypothetical protein SELMODRAFT_425291 [Selaginella moellendorffii]
 gi|300145929|gb|EFJ12602.1| hypothetical protein SELMODRAFT_425291 [Selaginella moellendorffii]
          Length = 956

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 240/512 (46%), Gaps = 67/512 (13%)

Query: 70  LTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLK 127
           L VLN+S N LS ++P   G+L  L++L ++FN +  +IP+E+G+   L   +   N+L+
Sbjct: 101 LKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLR 160

Query: 128 E-LPSSLGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             +P+ LG    L       N +T++ P +L++CS +  L ++ N L             
Sbjct: 161 GVIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLE------------ 208

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA 244
                        +P  +G L +L  + L  N +  S+PSS+  C ++ E ++G N+L  
Sbjct: 209 -----------GSIPAELGVLPQLELIALGSNHLSGSLPSSLGNCTNMQEIWLGVNSLKG 257

Query: 245 -LPAELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSG-LPPEIGKMTT 299
            +P ELG+L KL  L L  NQL  +    +  C + + +  L  NSLSG +P   G++  
Sbjct: 258 PIPEELGRLKKLQVLHLEQNQLDGHIPLALANCSMLIELF-LGGNSLSGQIPSSFGQLQN 316

Query: 300 LRKLLLTGNPLRTLR------------------SSLVNGPTPALLKYLRSRLPENEDSEA 341
           ++ L L G+   T +                  S  ++GP P+ L   R  L     +E 
Sbjct: 317 MQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSL--FRLPLTTLALAEL 374

Query: 342 STTKEDLITMATRL----SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELP 396
             TK +  T++ R+    ++T+ +L +      +IP E+     + +L+L  N    E+P
Sbjct: 375 GLTKNNSGTLSPRIGNVTTLTNLDLGICTFR-GSIPKELANLTALERLNLGSNLFDGEIP 433

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQI 455
            +L    +LQ L L  N +       LTSLS L  L +  N L  ++    F++   +  
Sbjct: 434 QDLGRLVNLQHLFLDTNNLHGAVPQSLTSLSKLQDLFIHRNSLSGRISHLSFENWTQMTD 493

Query: 456 LDLSYN--IASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSL-Q 511
           L +  N    S+PE+     L  LQ LY+         P+ + +LQ+L  +DLS+N L  
Sbjct: 494 LRMHENKLTGSIPES--LGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIG 551

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            IP    N +SL +LDLS N IS   P+ +  
Sbjct: 552 EIPRSLGNCSSLKQLDLSKNAISGRVPDEIGT 583



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 229/520 (44%), Gaps = 85/520 (16%)

Query: 64  LRNLPLLTV----LNVSHNKLSELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVK 118
           L  LPL T+    L ++ N    L   IG +  L +LD+   +    IP E+ + TAL +
Sbjct: 361 LFRLPLTTLALAELGLTKNNSGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALER 420

Query: 119 FDCSSNQL-KELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            +  SN    E+P  LGR +NL   F  +NN   ++P+ L   SK+  L +  N L+   
Sbjct: 421 LNLGSNLFDGEIPQDLGRLVNLQHLFLDTNNLHGAVPQSLTSLSKLQDLFIHRNSLSGRI 480

Query: 177 NNL-IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           ++L   +WT +T+L   +N L G +PE++G LS+L        +IL              
Sbjct: 481 SHLSFENWTQMTDLRMHENKLTGSIPESLGDLSQL--------QIL-------------- 518

Query: 235 FYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG- 289
            YM +N+ S  +P+ +GKL KL  +DL  N L       +  C   L  LDLS N++SG 
Sbjct: 519 -YMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCS-SLKQLDLSKNAISGR 576

Query: 290 LPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK--YLRSRLPENEDSEASTTKE 346
           +P EIG +  +L+ L + GN L         G  P  L+   L  RL    +S       
Sbjct: 577 VPDEIGTICKSLQTLGVEGNKL--------TGNLPVTLENCTLLERLKVGNNSLKGELGM 628

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASL 405
           ++  +++   ++    + +G      P  +  A  I  +DL  N    ELP  L    +L
Sbjct: 629 NISKLSSLKILSLSLNNFQGQ----FP--LLNATSIELIDLRGNRFTGELPSSLGKYQTL 682

Query: 406 QTLILSRNKIK------DWPDAILTSLSSLSCLKLDNNPLR-QVPS-----DGFKDIP-- 451
           + L L  N  +      DW    L +L+ L  L L NN     +P+      GFK  P  
Sbjct: 683 RVLSLGNNSFRGSLTSMDW----LWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTPEG 738

Query: 452 -------MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRIL 503
                  + Q  DL  ++      P    L     L L   QL  + P  +  L  LR L
Sbjct: 739 DAADADRLYQ--DLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYL 796

Query: 504 DLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPPELVS 542
           +LS N+    IP  +  +T L +LDLS N++    P L++
Sbjct: 797 NLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLA 836



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 246/628 (39%), Gaps = 158/628 (25%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSI 103
           +L+ L L  N +E ++ E+L  +  LT LN+ +NKL   +PA +G L  L++L +  N++
Sbjct: 124 NLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGVIPAMLGHLKKLETLALHMNNL 183

Query: 104 MKI-------------------------PDEIGSATALVKFDCSSNQLK-ELPSSLGRCL 137
             I                         P E+G    L      SN L   LPSSLG C 
Sbjct: 184 TNIIPRELSNCSNLQVLVLQANMLEGSIPAELGVLPQLELIALGSNHLSGSLPSSLGNCT 243

Query: 138 NLSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           N+ +     N +   +PE+L    K+  L +E N+L       +A+ +ML EL    N L
Sbjct: 244 NMQEIWLGVNSLKGPIPEELGRLKKLQVLHLEQNQLDGHIPLALANCSMLIELFLGGNSL 303

Query: 197 NG-MPETIGSLSRLIRLDLHQNRILS--IPSSISGCC----------------------- 230
           +G +P + G L  +  L L+ ++ L+  IP  +  C                        
Sbjct: 304 SGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFR 363

Query: 231 ------SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV----- 279
                 +LAE  +  N    L   +G ++ L  LDL            C  R S+     
Sbjct: 364 LPLTTLALAELGLTKNNSGTLSPRIGNVTTLTNLDLG----------ICTFRGSIPKELA 413

Query: 280 -------LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                  L+L +N   G +P ++G++  L+ L L  N L         G  P  L  L  
Sbjct: 414 NLTALERLNLGSNLFDGEIPQDLGRLVNLQHLFLDTNNLH--------GAVPQSLTSLSK 465

Query: 332 -----------------------------RLPENE------DSEASTTKEDLITM----- 351
                                        R+ EN+      +S    ++  ++ M     
Sbjct: 466 LQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKLTGSIPESLGDLSQLQILYMFSNSF 525

Query: 352 -ATRLSVTSKELSLEGMNLSA------IPSEIWEAGEITKLDLSRNSIQ-ELPPELSS-C 402
             T  S+  K   L  M+LS       IP  +     + +LDLS+N+I   +P E+ + C
Sbjct: 526 SGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTIC 585

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 462
            SLQTL +  NK+       L + + L  LK+ NN L+        ++ M      S  I
Sbjct: 586 KSLQTLGVEGNKLTGNLPVTLENCTLLERLKVGNNSLK-------GELGMNISKLSSLKI 638

Query: 463 ASLPENPPFSSLPHLQELYLRRMQLR------EAPTDILRLQQLRILDLSQNSLQ---SI 513
            SL  N      P L    +  + LR      E P+ + + Q LR+L L  NS +   + 
Sbjct: 639 LSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTS 698

Query: 514 PEGFKNLTSLTELDLSDNNI-SALPPEL 540
            +   NLT L  LDLS+N    +LP  L
Sbjct: 699 MDWLWNLTQLQVLDLSNNQFEGSLPATL 726



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATAL 116
           KL   + +L  L  LN+SHN  S E+P++ G++  L+ LD+SFN +   IP  + +  +L
Sbjct: 782 KLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSL 841

Query: 117 VKFDCSSNQLK 127
             F+ S NQL+
Sbjct: 842 ASFNVSFNQLE 852


>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
          Length = 1669

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 59/365 (16%)

Query: 13  SLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLK 61
           S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L 
Sbjct: 16  SVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 182 --------------------------------SWTMLTELIA-------------SKNLL 196
                                           S   L EL A             S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 65/371 (17%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEA-----------------------CQLR-LSVLDLSNNSLSGLP 291
             LD+  N+L+E   E                         QL+ LS+L +  N L  +P
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVP 282

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG    L +L+LT N L  L  SL                               +T 
Sbjct: 283 EAIGDCENLSELILTENLLTALPHSLGK-----------------------------LTK 313

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            T L+V    L +       +P EI     ++ L L  N +  LPPEL+  A L  L ++
Sbjct: 314 LTNLNVDRNHLEV-------LPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVA 366

Query: 412 RNKIKDWPDAI 422
            N+++  P A+
Sbjct: 367 GNRLRSLPFAL 377



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 190/450 (42%), Gaps = 109/450 (24%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 74  LPPEVANFMQLVELDV------------------------SRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKS---- 165

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                             LP  +  +  L +L L GN L  L  +L  G  P L      
Sbjct: 166 ------------------LPASLSFLVKLEQLDLGGNDLEVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LSA+P E+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSALPPELGNLRRLVCLDVSENR 231

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 451
           ++ELP EL     L  L+LS+N ++  PD I   L  LS LK+D N L +VP +   D  
Sbjct: 232 LEELPAELGGLVLLTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVP-EAIGDCE 289

Query: 452 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
            L  L L+ N+         ++LPH                 + +L +L  L++ +N L+
Sbjct: 290 NLSELILTENL--------LTALPH----------------SLGKLTKLTNLNVDRNHLE 325

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELV 541
            +P       +L+ L L DN ++ LPPEL 
Sbjct: 326 VLPPEIGGCVALSVLSLRDNRLAVLPPELA 355



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L+  P +I R  + L  L L  N L+ +P+ F  L +L +L LSDN I 
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQ 72

Query: 535 ALPPELV 541
            LPPE+ 
Sbjct: 73  RLPPEVA 79


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 142 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 201

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 202 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 261

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 262 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 320

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 321 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 380

Query: 286 S 286
            
Sbjct: 381 Q 381



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 188/417 (45%), Gaps = 70/417 (16%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL  VP E+Y+             A  L++L+L  N + +L E    L  L  L +S N+
Sbjct: 13  SLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNE 60

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  LP  I     L  LDVS N I +IP+ I    AL   D S N L  LP S     NL
Sbjct: 61  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 120

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------------- 179
           +    ++  + SLPE++ +   ++ L++  N LT L ++L                    
Sbjct: 121 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 180

Query: 180 --IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
             I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +
Sbjct: 181 ESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVI 240

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
             N L  +P  +GKL K                      LS+L +  N L+ LP  +G  
Sbjct: 241 SQNLLETIPDGIGKLKK----------------------LSILKVDQNRLTQLPEAVGDC 278

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V
Sbjct: 279 ESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV 329

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                 +    L+ IP+E+ +A E+  LD++ N +  LP  L++   L+ L LS N+
Sbjct: 330 ----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA-LKLKALWLSDNQ 381



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 187/456 (41%), Gaps = 90/456 (19%)

Query: 91  HMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           H ++S+D    S++ +P+EI   A +L +    +NQL+ELP                   
Sbjct: 2   HHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELP------------------- 42

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
               E      K+ KL +                        S N +  +P  I +  +L
Sbjct: 43  ----EQFFQLVKLRKLGL------------------------SDNEIQRLPPEIANFMQL 74

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + LD+ +N I  IP SIS C +L       N L+ LP    +L  L  L ++   L+   
Sbjct: 75  VELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLP 134

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L  L+ L+L  N L+ LP  + ++  L +L L  N +  L  S+      ALL  
Sbjct: 135 ENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESI-----GALLHL 189

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                                          K+L L+G  LS +P EI     +  LD+S
Sbjct: 190 -------------------------------KDLWLDGNQLSELPQEIGNLKNLLCLDVS 218

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 448
            N ++ LP E+S   SL  L++S+N ++  PD I   L  LS LK+D N L Q+P +   
Sbjct: 219 ENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-GKLKKLSILKVDQNRLTQLP-EAVG 276

Query: 449 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           D   L  L L+ N + +LP++     L  L  L   R +L   P +I     L +  +  
Sbjct: 277 DCESLTELVLTENQLLTLPKS--IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRD 334

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 335 NRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL 370


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 38/378 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +  +LQKL L  N    L +++  L  L  LN+++NKL+ LP  IG+L  L+ L +
Sbjct: 58  NKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSL 117

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N ++ +P EIG    L K +  +N+L  LP  +G+  NL +    +N + SLP ++  
Sbjct: 118 HSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+ T +S  ++   T L  L    N L  +P+ I  L  L  L L  N+
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVMLLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQ 236

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + S+P  I    +L    +G N     P E+ +L  L  L+L+ NQL E+  E  QL+ L
Sbjct: 237 LTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSL 296

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L +N ++ LP E+ ++  L++L L+GN +  L   ++       LK L        
Sbjct: 297 KYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ------LKNLEW------ 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                   LSL    L+A+P EI +  ++ +L+L  N +  LP 
Sbjct: 345 ------------------------LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPK 380

Query: 398 ELSSCASLQTLILSRNKI 415
           E+    +LQ L L  N I
Sbjct: 381 EIEQLKNLQRLELDSNPI 398



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 179/395 (45%), Gaps = 68/395 (17%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSL 206
           + +L   +     + KLD+ GN+ T+LS  +   W +  L +L  + N L  +P+ IG L
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEI---WQLKDLQKLNLNNNKLTVLPKEIGQL 109

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L LH N ++++P  I    +L +  + NN L+ LP E+G+L  L  L L SN+L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  QL+ L  LDL+NN  + +  E+  + TL  L L  N L+T+         P  
Sbjct: 170 SLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI---------PKE 220

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           ++ L+S                            K L L G  L+++P EI +   +  L
Sbjct: 221 IRQLKSL---------------------------KVLMLTGNQLTSLPKEIEQLQNLKTL 253

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +L  N  Q  P E+    +L  L L  N++ ++P  +   L SL  L L +N +  +P +
Sbjct: 254 NLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVE 312

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                                     + LP LQEL+L   ++   P +IL+L+ L  L L
Sbjct: 313 -------------------------VTQLPDLQELHLSGNKITILPKEILQLKNLEWLSL 347

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           S N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 348 SNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 189/418 (45%), Gaps = 56/418 (13%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           YKN ++A          D++ L L+   ++ L   +  L  L  L++  N+ + L   I 
Sbjct: 30  YKNLEKA-----LLNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIW 84

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +L  L+ L+++ N +  +P EIG    L +    SN+L  LP  +G+  NL      NN 
Sbjct: 85  QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNK 144

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL-LNGMPETIGS-- 205
           +T LP+++     +        +L++LSN LI+  T + +L + KNL LN    T  S  
Sbjct: 145 LTVLPKEIGQLQNLQ-------ELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKE 197

Query: 206 ---LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              L  L  LDL  N++ +IP  I    SL    +  N L++LP E+ +L  L TL+L  
Sbjct: 198 VMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257

Query: 263 NQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+ + + VE      L  L+L  N L   P E+G++ +L+ L L  N + TL   +   P
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLP 317

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                                    DL           +EL L G  ++ +P EI +   
Sbjct: 318 -------------------------DL-----------QELHLSGNKITILPKEILQLKN 341

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +  L LS N +  LP E+     LQ L L  N++   P  I   L +L  L+LD+NP+
Sbjct: 342 LEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + L  + ++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I   L +L  L L +N L  +P +                              +LQ+
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKNLQK 137

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL++N  + +  E
Sbjct: 138 LNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKE 197

Query: 540 LV 541
           ++
Sbjct: 198 VM 199


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 353

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N +  L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +  
Sbjct: 65  NLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTT 124

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+     L K + S N+L  +P  +G+  NL   K  +N I SLP+++ +  ++ +L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKEL 184

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+   +    +     L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ 
Sbjct: 185 ILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTE 243

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L E Y+  N  ++LP E+ KL  L  L L++N+L     E  QL+ L  L+L N
Sbjct: 244 VLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQLKNLQRLELGN 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  NPL
Sbjct: 304 NQLTNLPKEIGQLKNLQRLELDSNPL 329



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 146/322 (45%), Gaps = 38/322 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L + D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LT +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLTTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I     L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL    L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLNNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQTLILSRN 413
           +  LP E+    +LQ L L  N
Sbjct: 306 LTNLPKEIGQLKNLQRLELDSN 327



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 137/281 (48%), Gaps = 27/281 (9%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRL 333
           + VLDLS  +L+  P EIG+   L++L L+GN L  L   +V   N    +L     + L
Sbjct: 43  VRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITK 384
           P+  +   S    DL     +L+   KE+    +LE +NLS     A+P EI +   +  
Sbjct: 103 PKEIEQLKSLKNLDL--FRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQI 160

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           L L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P 
Sbjct: 161 LKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIP- 218

Query: 445 DGFKDIPMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
              K+I  LQ     +LD +  I  LP       L +LQELYL   Q    P +I +L+ 
Sbjct: 219 ---KEILQLQNLRNLVLDRNQ-ITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKN 272

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           LR L L+ N L ++P+    L +L  L+L +N ++ LP E+
Sbjct: 273 LRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEI 313



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 5/185 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L G  L+ +  EI +   + +L L  N +  LP E+    SL+ L L RN++   P
Sbjct: 67  QRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTTVP 126

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             ++  L +L  L L  N L  VP +    +  LQIL L +N I SLP+      L  L+
Sbjct: 127 KEVML-LQTLEKLNLSLNRLNAVPKE-IGQLKNLQILKLDHNQIVSLPK--EIEELQELK 182

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           EL L   + +  P + L+L+ L+ L+LS+N L SIP+    L +L  L L  N I+ LP 
Sbjct: 183 ELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPT 242

Query: 539 ELVSV 543
           E++ +
Sbjct: 243 EVLQL 247



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
             N+++ LP  + +L  L+ L +S N    +P EI     L     ++N+L  LP  +G+
Sbjct: 233 DRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 22/162 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L  N I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRNLVLDRNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L ++ N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSLPED-----LADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S  ++     L +C    ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPNC----EIDFEG 350



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)

Query: 453 LQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 511
           +++LDLS+ N+ + P+        +LQ L L   +L     +I++LQ L+ L L  N L 
Sbjct: 43  VRVLDLSFQNLTTFPK--EIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT 100

Query: 512 SIPEGFKNLTSLTELDLSDNNISALPPELV 541
           ++P+  + L SL  LDL  N ++ +P E++
Sbjct: 101 NLPKEIEQLKSLKNLDLFRNQLTTVPKEVM 130


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 6/280 (2%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L+ L L +N +  L E +  L  L  L++ +N+L+ LP  +  L  L+ LD++ N
Sbjct: 70  WQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANN 129

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG+ ++L       NQL  LP  +    NL     SNN + +LP  + + + 
Sbjct: 130 QLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLAS 189

Query: 162 MSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +  L ++ N+ + L   +   W +  L  L    N LN +P  IG+LS L  L L  +  
Sbjct: 190 LQSLALDNNQFSSLPGQV---WNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHF 246

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            S+P  +     L    +  N LS+LPAE+G LS+L  LDL +NQ      E   L  L 
Sbjct: 247 SSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLR 306

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L+LSNN  S LP EI  +++L+ L L  N  +TL + L+
Sbjct: 307 WLNLSNNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELI 346



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 40/336 (11%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+IRL L +  +  IPS +    SL   Y+ NN L  LP ++ +LS L  LDL +NQL  
Sbjct: 51  RVIRLHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNS 110

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              +   LR L VLDL+NN LS LP EIG +++L  L L  N L TL   + N      L
Sbjct: 111 LPEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRN---L 167

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           ++L   L  N+ +      ++L ++ +        L+L+    S++P ++W    +  L 
Sbjct: 168 QFL--HLSNNQLNTLPAKIDNLASLQS--------LALDNNQFSSLPGQVWNLRNLQFLA 217

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           L  N +  LP E+ + + L +L L  +     P  +  +LS L  L L  N L  +P++ 
Sbjct: 218 LGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVW-NLSKLRHLGLTLNQLSSLPAE- 275

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             ++  LQ LDLS        N  FSSL                P +I  L  LR L+LS
Sbjct: 276 IGNLSELQWLDLS--------NNQFSSL----------------PAEISNLSSLRWLNLS 311

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            N   S+P+   NL+SL  L+L DN    L  EL++
Sbjct: 312 NNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELIA 347



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 39/304 (12%)

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +HS   ++ C      R+  L L   +L+ +P E+ + ++L+ L LT N LRTL      
Sbjct: 35  VHSWMREKQCQYDKYGRVIRLHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTL------ 88

Query: 320 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
              P  +  L S +  + E+++ ++  E +  +   L V    L L    LS++P EI  
Sbjct: 89  ---PEQVSRLSSLQWLDLENNQLNSLPEQVRNLRD-LQV----LDLANNQLSSLPGEIGN 140

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              +  L L  N +  LP ++ +  +LQ L LS N++   P A + +L+SL  L LDNN 
Sbjct: 141 LSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLP-AKIDNLASLQSLALDNNQ 199

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLP--------------ENPPFSSLPH------- 476
              +P   + ++  LQ L L  N + SLP               N  FSSLP        
Sbjct: 200 FSSLPGQVW-NLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSK 258

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
           L+ L L   QL   P +I  L +L+ LDLS N   S+P    NL+SL  L+LS+N  S+L
Sbjct: 259 LRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSL 318

Query: 537 PPEL 540
           P E+
Sbjct: 319 PKEI 322



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N     +P +V             W   +LQ L L +N +  L  ++ NL  L+ 
Sbjct: 192 SLALDNNQFSSLPGQV-------------WNLRNLQFLALGNNQLNSLPAEIGNLSELSS 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ ++  S LP  +  L  L+ L ++ N +  +P EIG+ + L   D S+NQ   LP+ 
Sbjct: 239 LHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +    +L     SNN  +SLP+++++ S +  L++  N    L   LIA
Sbjct: 299 ISNLSSLRWLNLSNNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELIA 347


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 38/378 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +  +LQKL L  N    L +++  L  L  LN+++NKL+ LP  IG+L  L+ L +
Sbjct: 58  NKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSL 117

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N ++ +P EIG    L K +  +N+L  LP  +G+  NL +    +N + SLP ++  
Sbjct: 118 HSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+ T +S  ++   T L  L    N L  +P+ I  L  L  L L  N+
Sbjct: 178 LKSLKNLDLNHNEFTTVSKEVMLLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQ 236

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + S+P  I    +L    +G N     P E+ +L  L  L+L+ NQL E+  E  QL+ L
Sbjct: 237 LTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSL 296

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L +N ++ LP E+ ++  L++L L+GN +  L   ++       LK L        
Sbjct: 297 KYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ------LKNLEW------ 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                   LSL    L+A+P EI +  ++ +L+L  N +  LP 
Sbjct: 345 ------------------------LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPK 380

Query: 398 ELSSCASLQTLILSRNKI 415
           E+    +LQ L L  N I
Sbjct: 381 EIEQLKNLQRLELDSNPI 398



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 177/388 (45%), Gaps = 42/388 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL L      S   L  L   IG+L  L+ LD+  N    +  EI     L K + +
Sbjct: 42  DVRNLDL------SFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLN 95

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    +N + +LP+++     + KL+++ NKLTVL       
Sbjct: 96  NNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL------- 148

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P+ IG L  L  L L  N+++S+P+ I    SL    + +N  
Sbjct: 149 -----------------PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEF 191

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + +  E+  L  L  LDL SN+LK    E  QL+ L VL L+ N L+ LP EI ++  L+
Sbjct: 192 TTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTK------EDLITMAT 353
            L L  N  +     ++       L    ++L E   E  +  + K        + T+  
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
            ++     +EL L G  ++ +P EI +   +  L LS N +  LP E+     LQ L L 
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELG 371

Query: 412 RNKIKDWPDAILTSLSSLSCLKLDNNPL 439
            N++   P  I   L +L  L+LD+NP+
Sbjct: 372 NNQLTTLPKEI-EQLKNLQRLELDSNPI 398



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 166/342 (48%), Gaps = 23/342 (6%)

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L  L LHS
Sbjct: 60  IGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHS 119

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L        
Sbjct: 120 NELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL-------- 171

Query: 322 TPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
            P  ++ L+S   L  N +   + +KE        L  T + L L    L  IP EI + 
Sbjct: 172 -PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTIPKEIRQL 224

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
             +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L      N  L
Sbjct: 225 KSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ-L 283

Query: 440 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 498
            + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P +IL+L+
Sbjct: 284 VEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILPKEILQLK 340

Query: 499 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L  L LS N L ++P+    L  L  L+L +N ++ LP E+
Sbjct: 341 NLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 26/182 (14%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           + L L  + L  + ++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 479
             I   L +L  L L +N L  +P +                              +LQ+
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKE-------------------------IGQFKNLQK 137

Query: 480 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 539
           L L   +L   P +I +LQ L+ L L  N L S+P   + L SL  LDL+ N  + +  E
Sbjct: 138 LNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKE 197

Query: 540 LV 541
           ++
Sbjct: 198 VM 199


>gi|302847486|ref|XP_002955277.1| hypothetical protein VOLCADRAFT_96185 [Volvox carteri f.
           nagariensis]
 gi|300259349|gb|EFJ43577.1| hypothetical protein VOLCADRAFT_96185 [Volvox carteri f.
           nagariensis]
          Length = 1149

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 240/551 (43%), Gaps = 110/551 (19%)

Query: 43  EAVDLQKLILA---HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E   LQ + +A   HN    +  ++  L  L VLN S N +  L   I   H L  L++S
Sbjct: 203 ELSKLQAVYVADVRHNGWSSVPPEVLKLNGLVVLNASDNDIESLAEGITPQH-LGVLNLS 261

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           FN +  +P  +G++  L +   ++N+L +LP +   CL + D   S N    +P  +   
Sbjct: 262 FNRLASLPPALGASPVLQQMYLANNRLTDLPRTFA-CLPMVDLFLSENLFERVPVAVLGM 320

Query: 160 SKMSKL-----------------------DVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           S+++KL                       D+  N+L+ L + L +  T L  L  S N L
Sbjct: 321 SQLAKLSMACCRLREVPDALGSVATLKFLDLSFNQLSSLPDGL-SRLTALNALNVSFNPL 379

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSIS-----------GCC---SLAEFYMGN--- 239
            G P  + +++ L+ L+L    + ++P  +            GC      A  Y  N   
Sbjct: 380 TGFPPVLTTITGLLELNLDHTGVQTVPEGLGELRRLEGLQLEGCPLPEPAATLYAANPLL 439

Query: 240 ------NALSALPAELGKL--SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
                 + +  +PAE G +  + L +LDL    L++    +  + L+ LDLS N  S  P
Sbjct: 440 LVQPVQHTIRHVPAE-GPVHNTALTSLDLSGLGLEKIPQLSRLVGLTALDLSRNRFSRPP 498

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
           PE+ ++T L  L L  NPL          P   LL           +++      DLI  
Sbjct: 499 PELVRLTDLHALSLRDNPLAH--------PFDVLL-----------EAQGDLALVDLI-- 537

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSI----QELPPELSSCASLQ 406
                  + +L + G  L ++P+E+   AG++T+L LS N++      LP  L+S  +L 
Sbjct: 538 ----DPEADKLDMSGCGLESLPAELAPHAGKLTQLKLSNNNLTSGPASLPEWLTSFGALA 593

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
           T++L RN++ + P A+LT L                        P L IL  S+N+ S  
Sbjct: 594 TVVLDRNRLAELP-AVLTRL------------------------PRLSILMASFNVISNL 628

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +         L+ L L+  Q+ E P  I RL +L+ L LS N L S+P+     + L  L
Sbjct: 629 QQDVLVGFSRLKALVLQNNQVSELPASISRLTELKALVLSGNRLTSLPDALCGCSGLRLL 688

Query: 527 DLSDNNISALP 537
           D+S N +++LP
Sbjct: 689 DMSHNGLTSLP 699



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 227/537 (42%), Gaps = 70/537 (13%)

Query: 12  GSLNLSNRSLRDVP---------NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           G LNLS   L  +P          ++Y   +   +  + +  + +  L L+ N  E++  
Sbjct: 256 GVLNLSFNRLASLPPALGASPVLQQMYLANNRLTDLPRTFACLPMVDLFLSENLFERVPV 315

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  +  L  L+++  +L E+P A+G +  LK LD+SFN +  +PD +   TAL   + S
Sbjct: 316 AVLGMSQLAKLSMACCRLREVPDALGSVATLKFLDLSFNQLSSLPDGLSRLTALNALNVS 375

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N L   P  L     L +    +  + ++PE L +  ++  L +EG  L   +  L A+
Sbjct: 376 FNPLTGFPPVLTTITGLLELNLDHTGVQTVPEGLGELRRLEGLQLEGCPLPEPAATLYAA 435

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
             +L        + +   E     + L  LDL    +  IP  +S    L    +  N  
Sbjct: 436 NPLLLVQPVQHTIRHVPAEGPVHNTALTSLDLSGLGLEKIP-QLSRLVGLTALDLSRNRF 494

Query: 243 SALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           S  P EL +L+ L  L L  N L    +  +EA Q  L+++DL +       PE  K+  
Sbjct: 495 SRPPPELVRLTDLHALSLRDNPLAHPFDVLLEA-QGDLALVDLID-------PEADKLD- 545

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
                ++G  L +L         PA                      +L   A +L+   
Sbjct: 546 -----MSGCGLESL---------PA----------------------ELAPHAGKLT--- 566

Query: 360 KELSLEGMNLSAIPSEIWE----AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +L L   NL++ P+ + E     G +  + L RN + ELP  L+    L  L+ S N I
Sbjct: 567 -QLKLSNNNLTSGPASLPEWLTSFGALATVVLDRNRLAELPAVLTRLPRLSILMASFNVI 625

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 474
            +    +L   S L  L L NN + ++P+     +  L+ L LS N + SLP+       
Sbjct: 626 SNLQQDVLVGFSRLKALVLQNNQVSELPAS-ISRLTELKALVLSGNRLTSLPDA--LCGC 682

Query: 475 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L+ L +    L   P+ I  L +L+ L LS N L ++P G   L  LTEL L+ N
Sbjct: 683 SGLRLLDMSHNGLTSLPSGIAALSKLKSLKLSHNELPTVPRGMSCLLGLTELQLAHN 739



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 207/490 (42%), Gaps = 41/490 (8%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +  L + HN L  +P  +  L  L+ LD++ N +          ++L   D S N L+ L
Sbjct: 36  IKTLLLGHNSLKVIPPGVFLLAGLEQLDLNHNRLTDASGPWYHLSSLQSLDLSHNDLRML 95

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADC---SKMSKLDVEGNKLTVLSNNLIASWTML 186
           P  +G  L L+  +   N    +PE +      + +S L V   +  ++  +L       
Sbjct: 96  PPDIG-WLPLASLELGGNDNLRVPEGVMAGGFRAVISYLQVICEQHRLVEQHLDKFAAPA 154

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI--------PSSISGCCSLAEFYMG 238
           TE       L   P    +LS L+   L    +  +         ++++    L   Y+ 
Sbjct: 155 TE-GEGGGPLRARPADPHTLSHLVARRLGAAAVTGVLDVKYVGTEAALAELSKLQAVYVA 213

Query: 239 ---NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIG 295
              +N  S++P E+ KL+ L  L+   N ++          L VL+LS N L+ LPP +G
Sbjct: 214 DVRHNGWSSVPPEVLKLNGLVVLNASDNDIESLAEGITPQHLGVLNLSFNRLASLPPALG 273

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
               L+++ L  N L  L  +       A L  +   L EN           +  +A   
Sbjct: 274 ASPVLQQMYLANNRLTDLPRTF------ACLPMVDLFLSENLFERVPVAVLGMSQLA--- 324

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
                +LS+    L  +P  +     +  LDLS N +  LP  LS   +L  L +S N +
Sbjct: 325 -----KLSMACCRLREVPDALGSVATLKFLDLSFNQLSSLPDGLSRLTALNALNVSFNPL 379

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
             +P  +LT+++ L  L LD+  ++ VP +G  ++  L+ L L      LPE  P ++L 
Sbjct: 380 TGFP-PVLTTITGLLELNLDHTGVQTVP-EGLGELRRLEGLQLEG--CPLPE--PAATLY 433

Query: 476 HLQELYLRR---MQLREAPTD-ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
               L L +     +R  P +  +    L  LDLS   L+ IP+    L  LT LDLS N
Sbjct: 434 AANPLLLVQPVQHTIRHVPAEGPVHNTALTSLDLSGLGLEKIPQ-LSRLVGLTALDLSRN 492

Query: 532 NISALPPELV 541
             S  PPELV
Sbjct: 493 RFSRPPPELV 502



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 151/359 (42%), Gaps = 50/359 (13%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSG 289
           S+    +G+N+L  +P  +  L+ L  LDL+ N+L +          L  LDLS+N L  
Sbjct: 35  SIKTLLLGHNSLKVIPPGVFLLAGLEQLDLNHNRLTDASGPWYHLSSLQSLDLSHNDLRM 94

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL-----RSRLPENE-DSEAST 343
           LPP+IG +  L  L L GN    +   ++ G   A++ YL     + RL E   D  A+ 
Sbjct: 95  LPPDIGWL-PLASLELGGNDNLRVPEGVMAGGFRAVISYLQVICEQHRLVEQHLDKFAAP 153

Query: 344 TKE------------------DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
             E                   L+      +  +  L ++ +   A  +E+ +   +   
Sbjct: 154 ATEGEGGGPLRARPADPHTLSHLVARRLGAAAVTGVLDVKYVGTEAALAELSKLQAVYVA 213

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           D+  N    +PPE+     L  L  S N I+   + I  +   L  L L  N L  +P  
Sbjct: 214 DVRHNGWSSVPPEVLKLNGLVVLNASDNDIESLAEGI--TPQHLGVLNLSFNRLASLPP- 270

Query: 446 GFKDIPMLQ--------ILDLSYNIASLP-----------ENPPFS--SLPHLQELYLRR 484
                P+LQ        + DL    A LP           E  P +   +  L +L +  
Sbjct: 271 ALGASPVLQQMYLANNRLTDLPRTFACLPMVDLFLSENLFERVPVAVLGMSQLAKLSMAC 330

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +LRE P  +  +  L+ LDLS N L S+P+G   LT+L  L++S N ++  PP L ++
Sbjct: 331 CRLREVPDALGSVATLKFLDLSFNQLSSLPDGLSRLTALNALNVSFNPLTGFPPVLTTI 389



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 17/260 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE----LPAAIGELHMLK------ 94
           V L  L L+ N   +   +L  L  L  L++  N L+     L  A G+L ++       
Sbjct: 482 VGLTALDLSRNRFSRPPPELVRLTDLHALSLRDNPLAHPFDVLLEAQGDLALVDLIDPEA 541

Query: 95  -SLDVSFNSIMKIPDEIG-SATALVKFDCSSNQLKELPSSLGRCLN----LSDFKASNNC 148
             LD+S   +  +P E+   A  L +   S+N L   P+SL   L     L+      N 
Sbjct: 542 DKLDMSGCGLESLPAELAPHAGKLTQLKLSNNNLTSGPASLPEWLTSFGALATVVLDRNR 601

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP  L    ++S L    N ++ L  +++  ++ L  L+   N ++ +P +I  L+ 
Sbjct: 602 LAELPAVLTRLPRLSILMASFNVISNLQQDVLVGFSRLKALVLQNNQVSELPASISRLTE 661

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L  NR+ S+P ++ GC  L    M +N L++LP+ +  LSKL +L L  N+L   
Sbjct: 662 LKALVLSGNRLTSLPDALCGCSGLRLLDMSHNGLTSLPSGIAALSKLKSLKLSHNELPTV 721

Query: 269 CVE-ACQLRLSVLDLSNNSL 287
               +C L L+ L L++N L
Sbjct: 722 PRGMSCLLGLTELQLAHNPL 741



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 130/282 (46%), Gaps = 20/282 (7%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L+   +EK+ + L  L  LT L++S N+ S  P  +  L  L +L +  N +   
Sbjct: 462 LTSLDLSGLGLEKIPQ-LSRLVGLTALDLSRNRFSRPPPELVRLTDLHALSLRDNPLAHP 520

Query: 107 PD---EIGSATALV--------KFDCSSNQLKELPSSLG-RCLNLSDFKASNNCITS--- 151
            D   E     ALV        K D S   L+ LP+ L      L+  K SNN +TS   
Sbjct: 521 FDVLLEAQGDLALVDLIDPEADKLDMSGCGLESLPAELAPHAGKLTQLKLSNNNLTSGPA 580

Query: 152 -LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRL 209
            LPE L     ++ + ++ N+L  L   ++     L+ L+AS N+++ + + +    SRL
Sbjct: 581 SLPEWLTSFGALATVVLDRNRLAELPA-VLTRLPRLSILMASFNVISNLQQDVLVGFSRL 639

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             L L  N++  +P+SIS    L    +  N L++LP  L   S L  LD+  N L    
Sbjct: 640 KALVLQNNQVSELPASISRLTELKALVLSGNRLTSLPDALCGCSGLRLLDMSHNGLTSLP 699

Query: 270 VE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              A   +L  L LS+N L  +P  +  +  L +L L  NPL
Sbjct: 700 SGIAALSKLKSLKLSHNELPTVPRGMSCLLGLTELQLAHNPL 741


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 34  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 81

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 82  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 141

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 142 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 201

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 202 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 260

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 261 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 320

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 321 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 350

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 351 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 404

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 405 LSDNQSK 411



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 168 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 227

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 228 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 287

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 288 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 346

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 347 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 406

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 407 DNQSKALIP 415



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 26  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 85

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 86  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 121

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 122 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 167

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 168 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 204 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 243

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 244 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 301

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 302 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 361

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 362 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 415



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 23  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 76

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 77  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 106

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 107 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 164

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 165 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 222

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 223 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 252



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 41  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 98

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 99  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 134

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 135 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 162

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 163 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 221

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 222 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 278

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 279 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 325


>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
 gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
          Length = 471

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 25/265 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L  N++  L E LRN   L VL++ HNKL+E+P  I +L  L +L + FN I 
Sbjct: 179 VNLRNLALNENSLTSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRIT 238

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D++     L       N++KEL S++G  +NL+    S+N +  LP+D+ +C  ++ 
Sbjct: 239 AVADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNA 298

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L  + +++      L  LI S N+L  +P TIG+L +L  LDL +NRI  +P 
Sbjct: 299 LDLQHNELLDIPDSI---GNNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            +     L    +  N ++ LP  +G LS                       L+ L +S 
Sbjct: 356 EVGLLHELQRLILQTNQITMLPRSIGHLSN----------------------LTHLSVSE 393

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNP 309
           N+L  LP EIG + +L  L +  NP
Sbjct: 394 NNLQFLPEEIGSLESLENLYINQNP 418



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 159/337 (47%), Gaps = 47/337 (13%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+  LDL ++ I  +P+++  C  L E Y+ +N +  LPAE+G L  L  L L+ N L  
Sbjct: 134 RIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTS 193

Query: 268 Y--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               +  C  +L VLDL +N L+ +PP I ++ +L  L                      
Sbjct: 194 LPESLRNCT-QLKVLDLRHNKLAEIPPVIYQLRSLTTL---------------------- 230

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
             YLR        +  +   +DL     R  V    LSL    +  + S I     +T L
Sbjct: 231 --YLRF-------NRITAVADDL-----RQLVNLTMLSLRENKIKELGSAIGSLVNLTTL 276

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           D+S N ++ LP ++ +C +L  L L  N++ D PD+I  +L  L    L NN L+++P +
Sbjct: 277 DVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNNLEILI---LSNNMLKKIP-N 332

Query: 446 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
              ++  L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L 
Sbjct: 333 TIGNLRKLRILDLEENRIEVLPHE--VGLLHELQRLILQTNQITMLPRSIGHLSNLTHLS 390

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 540
           +S+N+LQ +PE   +L SL  L ++ N  +  LP EL
Sbjct: 391 VSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 427



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 4/271 (1%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            + ++ L L+ ++I  L   +R    LT L +  NK+ +LPA IG L  L++L ++ NS+
Sbjct: 132 GIRIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSL 191

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P+ + + T L   D   N+L E+P  + +  +L+      N IT++ +DL     ++
Sbjct: 192 TSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLT 251

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L +  NK+  L +  I S   LT L  S N L  +P+ IG+   L  LDL  N +L IP
Sbjct: 252 MLSLRENKIKELGSA-IGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIP 310

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
            SI    +L    + NN L  +P  +G L KL  LDL  N+++    E   L  L  L L
Sbjct: 311 DSIGN--NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLIL 368

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             N ++ LP  IG ++ L  L ++ N L+ L
Sbjct: 369 QTNQITMLPRSIGHLSNLTHLSVSENNLQFL 399



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 14/247 (5%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDE-AGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           L+L +  L ++P  +Y+          F+      D   + V+L  L L  N I++L   
Sbjct: 207 LDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSA 266

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  LT L+VSHN L  LP  IG    L +LD+  N ++ IPD IG+   ++    S+
Sbjct: 267 IGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNNLEILIL--SN 324

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N LK++P+++G    L       N I  LP ++    ++ +L ++ N++T+L  + I   
Sbjct: 325 NMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLILQTNQITMLPRS-IGHL 383

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNAL 242
           + LT L  S+N L  +PE IGSL  L  L ++QN  L  +P  ++ C +L    +    L
Sbjct: 384 SNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 443

Query: 243 SALPAEL 249
             +P E+
Sbjct: 444 GTIPPEI 450


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGGCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 18/292 (6%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA-------HNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           VY N  EA +        D+Q L L        ++ +  L +++  L  L  L++S N+L
Sbjct: 94  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 148

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ LD+S N +  +P EIG    L K + +SNQL  L   +G   NL 
Sbjct: 149 MTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQ 208

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNG 198
                 N +T+LPE++ +   +  LD+  N+LT L   +   W +  L  L   +N L  
Sbjct: 209 TLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI---WNLQNLQTLDLGRNQLTT 265

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PE IG+L  L  LDL  N++ ++P  I    +L +  +  N L+ LP E+GKL KL  L
Sbjct: 266 LPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKL 325

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L++N+L    +E   L +L  L L +N L+ LP EIG +  L+ L L GNP
Sbjct: 326 YLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNP 377



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 37/250 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+              +  +LQKL L  N +  L +++ NL  L  L
Sbjct: 164 LDLSHNQLTTLPKEI-------------GQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTL 210

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  I  L  L++LD+  N +  +P+EI +   L   D   NQL  LP  +
Sbjct: 211 DLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI 270

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N + +LPE++ +   + KLD+EGN+LT L                  
Sbjct: 271 GNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTL------------------ 312

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L +L +L L+ NR+ ++P  I     L    +G+N L+ LP E+G L 
Sbjct: 313 ------PKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQ 366

Query: 254 KLGTLDLHSN 263
           KL  LDL  N
Sbjct: 367 KLKMLDLGGN 376



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 145/295 (49%), Gaps = 42/295 (14%)

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           N+ L  LP E+GKL  L  LDL SNQL     E  +L+ L  LDLS+N L+ LP EIG++
Sbjct: 122 NDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQL 181

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+KL L  N L TL   + N      L+ L++                          
Sbjct: 182 QNLQKLNLNSNQLTTLSKEIGN------LQNLQT-------------------------- 209

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
               L L    L+ +P EIW    +  LDL RN +  LP E+ +  +LQTL L RN++  
Sbjct: 210 ----LDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT 265

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 476
            P+ I  +L +L  L L+ N L  +P +   ++  LQ LDL  N + +LP+      L  
Sbjct: 266 LPEEI-GNLQNLQTLDLEGNQLATLPEE-IGNLQNLQKLDLEGNQLTTLPKE--IGKLQK 321

Query: 477 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
           L++LYL   +L   P +I  LQ+L+ L L  N L ++P+   NL  L  LDL  N
Sbjct: 322 LKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGN 376



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 5/182 (2%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 419
           ++L L    L  +P EI +   + KLDLS N +  LP E+    +LQ L L+ N++    
Sbjct: 139 RDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLS 198

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 478
             I  +L +L  L L  N L  +P + + ++  LQ LDL  N + +LPE     +L +LQ
Sbjct: 199 KEI-GNLQNLQTLDLGRNQLTTLPEEIW-NLQNLQTLDLGRNQLTTLPEE--IWNLQNLQ 254

Query: 479 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            L L R QL   P +I  LQ L+ LDL  N L ++PE   NL +L +LDL  N ++ LP 
Sbjct: 255 TLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPK 314

Query: 539 EL 540
           E+
Sbjct: 315 EI 316



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 5/173 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +P EI +   +  LDLS N +  LP E+    +LQ L LS N++   P  I   L +
Sbjct: 125 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEI-GQLQN 183

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L++N L  + S    ++  LQ LDL  N + +LPE     +L +LQ L L R QL
Sbjct: 184 LQKLNLNSNQLTTL-SKEIGNLQNLQTLDLGRNQLTTLPEE--IWNLQNLQTLDLGRNQL 240

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
              P +I  LQ L+ LDL +N L ++PE   NL +L  LDL  N ++ LP E+
Sbjct: 241 TTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEI 293



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L    L  +P E+             W   +LQ L L  N +  L E++ NL  L  
Sbjct: 209 TLDLGRNQLTTLPEEI-------------WNLQNLQTLDLGRNQLTTLPEEIWNLQNLQT 255

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG L  L++LD+  N +  +P+EIG+   L K D   NQL  LP  
Sbjct: 256 LDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKE 315

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L      NN +T+LP ++ +  K+  L +  N+LT L                 
Sbjct: 316 IGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTL----------------- 358

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQN 217
                  P+ IG+L +L  LDL  N
Sbjct: 359 -------PKEIGNLQKLKMLDLGGN 376


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 135/240 (56%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 117 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 176

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G+   L+  D S N+L+ LP  +    +L+D   S N +  +PE +    K+S L
Sbjct: 177 LPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSIL 236

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 237 KVDQNRLTQLPET-VGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKE 295

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 296 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 355



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 186/384 (48%), Gaps = 37/384 (9%)

Query: 31  NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           N  E  +  ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I   
Sbjct: 10  NMCERKQLRQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFC 69

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L+  D S N + ++P+       L     +   L+ LP ++G   NL+  +   N +T
Sbjct: 70  KALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLT 129

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+ L    ++ +LD+  N++  L  + I +   L +L    N L+ +P+ +G+L  L+
Sbjct: 130 YLPDSLTQLRRLEELDLGNNEIYSLPES-IGALLHLKDLWLDGNQLSELPQEVGNLKNLL 188

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LD+ +NR+  +P  ISG  SL +  +  N L  +P  +GKL K                
Sbjct: 189 CLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKK---------------- 232

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                 LS+L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L 
Sbjct: 233 ------LSILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSI------GKLKKL- 279

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S L  + +   S  KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N
Sbjct: 280 SNLNADRNKLMSLPKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGN 333

Query: 391 SIQELPPELSSCASLQTLILSRNK 414
            +  LP  L++   L+ L LS N+
Sbjct: 334 RLLHLPLSLTA-LKLKALWLSDNQ 356



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 159/360 (44%), Gaps = 42/360 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 26  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 85

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 86  PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 145

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N + +L  S+      ALL                                 K+L L
Sbjct: 146 LGNNEIYSLPESI-----GALLHL-------------------------------KDLWL 169

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P E+     +  LD+S N ++ LP E+S   SL  L++S+N ++  P+ I  
Sbjct: 170 DGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGI-G 228

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 229 KLKKLSILKVDQNRLTQLP-ETVGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 285

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 286 RNKLMSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL 345



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 26/204 (12%)

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
           V  ++L L    +  +P EI    ++ +LD+SRN I E+P  +S C +LQ    S N + 
Sbjct: 24  VKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLT 83

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPS----------------------DGFKDIPMLQ 454
             P++    L +L+CL +++  L+ +P                       D    +  L+
Sbjct: 84  RLPES-FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 142

Query: 455 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 513
            LDL  N I SLPE+    +L HL++L+L   QL E P ++  L+ L  LD+S+N L+ +
Sbjct: 143 ELDLGNNEIYSLPES--IGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERL 200

Query: 514 PEGFKNLTSLTELDLSDNNISALP 537
           PE    LTSLT+L +S N +  +P
Sbjct: 201 PEEISGLTSLTDLVISQNLLEIIP 224



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 15/256 (5%)

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +  ++  LRKL L+ N ++ L   + N      L   R+ +PE  +S +      +   +
Sbjct: 19  QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 78

Query: 353 ----TRLSVTSKE------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
               TRL  +  E      LS+  ++L ++P  I     +  L+L  N +  LP  L+  
Sbjct: 79  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 138

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
             L+ L L  N+I   P++I  +L  L  L LD N L ++P +   ++  L  LD+S N 
Sbjct: 139 RRLEELDLGNNEIYSLPESI-GALLHLKDLWLDGNQLSELPQE-VGNLKNLLCLDVSENR 196

Query: 462 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 521
           +  LPE    S L  L +L + +  L   P  I +L++L IL + QN L  +PE   +  
Sbjct: 197 LERLPEE--ISGLTSLTDLVISQNLLEIIPEGIGKLKKLSILKVDQNRLTQLPETVGDCE 254

Query: 522 SLTELDLSDNNISALP 537
           SLTEL L++N +  LP
Sbjct: 255 SLTELVLTENRLLTLP 270


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 195/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           + +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G+  +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGECESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 150/356 (42%), Gaps = 40/356 (11%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESVGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 484
            L  LS LK+D N L Q+P                                 L EL L  
Sbjct: 264 KLKKLSILKVDQNRLTQLPE-------------------------AVGECESLTELVLTE 298

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            QL   P  I +L++L  L+  +N L S+P+      SLT   + DN ++ +P E+
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|440791139|gb|ELR12393.1| leucine rich repeat domain containing protein, partial
           [Acanthamoeba castellanii str. Neff]
          Length = 738

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 207/462 (44%), Gaps = 54/462 (11%)

Query: 34  EAGEGDKWWEAVDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           + G  ++  EA D  K++   L    I  L   +  L  L  +N+  N L ELPA  GEL
Sbjct: 281 DHGVLERTAEATDSFKVLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGEL 340

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L+ L +SFN + ++PD  G+ T L   D  SN+L  LP S  +   L     S N + 
Sbjct: 341 RDLQYLTLSFNRLQRLPDTFGNLTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLN 400

Query: 151 SLPEDLAD-CSKMSKLDVEGNKLTVL------------------SNNLI----ASWTMLT 187
           SLP    D   ++  L++E N+L+                    +++L+    ++++ L 
Sbjct: 401 SLPRGFGDHFHRLEFLNLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITPQSNFSSLI 460

Query: 188 ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            L    N L   P  +   ++ L  L+L +N+I  IP +I+   +L   Y+G N +  +P
Sbjct: 461 TLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVIP 520

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +G L  L  L +H   + +   E   L  L  L L  N+   LP  I +MT LRKL L
Sbjct: 521 RSIGVLENLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQMTMLRKLDL 580

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR-----LSVTSK 360
             N +R              +  L   + +  + E    +E +I +  R       +T  
Sbjct: 581 --NFIR--------------MTNLPGEIGQLTNLEILQLRETMIKVLPREITNLRKLTDL 624

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS-CASLQTLILSRNKIKDWP 419
           +LSL   N++ +P E+ E   +  L++  N +Q LPPEL +    L+ L +S NK+   P
Sbjct: 625 DLSLN--NMTTVPEEVLELANLRTLEIMYNHLQTLPPELGNKLGRLKNLDVSHNKLTKLP 682

Query: 420 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            +I   L  L  L L  N L  +P +  + +P L+ L   YN
Sbjct: 683 PSI-AKLVELRQLDLSCNKLPHIPEEVLR-LPHLKFLSFGYN 722



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 203/466 (43%), Gaps = 30/466 (6%)

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           H  L     A     +L+ L+++   I  +P  IG    L   +   N L+ELP+  G  
Sbjct: 282 HGVLERTAEATDSFKVLR-LNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGEL 340

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            +L     S N +  LP+   + + +  LD+  NKLT L ++ +     L  L  S N L
Sbjct: 341 RDLQYLTLSFNRLQRLPDTFGNLTNLRMLDLHSNKLTRLPDSFV-KLGRLEYLTVSYNQL 399

Query: 197 NGMPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           N +P   G    RL  L+L  N++ S PSS      +A      N  S +       S L
Sbjct: 400 NSLPRGFGDHFHRLEFLNLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITPQSNFSSL 459

Query: 256 GTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            TL +  NQL  +    C     L  L+LS N +S +PP I  +T LR L L  NP+  +
Sbjct: 460 ITLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVI 519

Query: 314 RSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             S   L N     + +   + LPE             +T+   L    + L L      
Sbjct: 520 PRSIGVLENLYVLGIHQTFIADLPEE------------LTLLHNL----ETLYLRKNAFR 563

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P  I++   + KLDL+   +  LP E+    +L+ L L    IK  P  I T+L  L+
Sbjct: 564 VLPDVIFQMTMLRKLDLNFIRMTNLPGEIGQLTNLEILQLRETMIKVLPREI-TNLRKLT 622

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS-LPHLQELYLRRMQLR 488
            L L  N +  VP +   ++  L+ L++ YN + +LP  P   + L  L+ L +   +L 
Sbjct: 623 DLDLSLNNMTTVPEEVL-ELANLRTLEIMYNHLQTLP--PELGNKLGRLKNLDVSHNKLT 679

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           + P  I +L +LR LDLS N L  IPE    L  L  L    N ++
Sbjct: 680 KLPPSIAKLVELRQLDLSCNKLPHIPEEVLRLPHLKFLSFGYNKLT 725



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 171/375 (45%), Gaps = 42/375 (11%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           +K  +  +P  IG L  L  ++L +N +  +P+       L    +  N L  LP   G 
Sbjct: 303 NKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGELRDLQYLTLSFNRLQRLPDTFGN 362

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLTGNP 309
           L+ L  LDLHSN+L        +L RL  L +S N L+ LP   G     L  L L  N 
Sbjct: 363 LTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGFGDHFHRLEFLNLENNQ 422

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L +  SS        LL  +      NED + +T    +   +   S+ +  L +    L
Sbjct: 423 LSSPPSS------EGLLMPM-----ANEDDDGNTHSLVITPQSNFSSLIT--LRVGCNQL 469

Query: 370 SAIPSEIWE-AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------ 422
           +  P  + +    + +L+LSRN I  +PP +++  +L+ L L  N I+  P +I      
Sbjct: 470 TTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVIPRSIGVLENL 529

Query: 423 ----------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASL 465
                           LT L +L  L L  N  R +P   F+ + ML+ LDL++  + +L
Sbjct: 530 YVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQ-MTMLRKLDLNFIRMTNL 588

Query: 466 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 525
           P       L +L+ L LR   ++  P +I  L++L  LDLS N++ ++PE    L +L  
Sbjct: 589 PGE--IGQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRT 646

Query: 526 LDLSDNNISALPPEL 540
           L++  N++  LPPEL
Sbjct: 647 LEIMYNHLQTLPPEL 661



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 198/459 (43%), Gaps = 49/459 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-----CLNL-------- 139
           L S   S + +++   E   +  +++ + +   +  LP  +GR      +NL        
Sbjct: 274 LASASPSDHGVLERTAEATDSFKVLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQEL 333

Query: 140 -SDFKA---------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            ++F           S N +  LP+   + + +  LD+  NKLT L ++ +     L  L
Sbjct: 334 PAEFGELRDLQYLTLSFNRLQRLPDTFGNLTNLRMLDLHSNKLTRLPDSFV-KLGRLEYL 392

Query: 190 IASKNLLNGMPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
             S N LN +P   G    RL  L+L  N++ S PSS      +A      N  S +   
Sbjct: 393 TVSYNQLNSLPRGFGDHFHRLEFLNLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITP 452

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
               S L TL +  NQL  +    C     L  L+LS N +S +PP I  +T LR L L 
Sbjct: 453 QSNFSSLITLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLG 512

Query: 307 GNPLRTLRSS---LVNGPTPALLKYLRSRLPENED-----------SEASTTKEDLITMA 352
            NP+  +  S   L N     + +   + LPE                A     D+I   
Sbjct: 513 VNPIEVIPRSIGVLENLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQM 572

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           T L    ++L L  + ++ +P EI +   +  L L    I+ LP E+++   L  L LS 
Sbjct: 573 TML----RKLDLNFIRMTNLPGEIGQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSL 628

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
           N +   P+ +L  L++L  L++  N L+ +P +    +  L+ LD+S+N +  LP  P  
Sbjct: 629 NNMTTVPEEVL-ELANLRTLEIMYNHLQTLPPELGNKLGRLKNLDVSHNKLTKLP--PSI 685

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
           + L  L++L L   +L   P ++LRL  L+ L    N L
Sbjct: 686 AKLVELRQLDLSCNKLPHIPEEVLRLPHLKFLSFGYNKL 724



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 177/406 (43%), Gaps = 44/406 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLD 97
           D +    +L+ L L  N + +L +    L  L  L VS+N+L+ LP   G+  H L+ L+
Sbjct: 358 DTFGNLTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGFGDHFHRLEFLN 417

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +                        +NQL   PSS G  + +++     N  + +    +
Sbjct: 418 L-----------------------ENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITPQS 454

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + S +  L V  N+LT     L    T L EL  S+N ++ +P  I +L+ L  L L  N
Sbjct: 455 NFSSLITLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVN 514

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQ 274
            I  IP SI    +L    +    ++ LP EL  L  L TL L  N  +   +   +   
Sbjct: 515 PIEVIPRSIGVLENLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQMTM 574

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR   LDL+   ++ LP EIG++T L  L L    ++ L   + N     L K     L 
Sbjct: 575 LR--KLDLNFIRMTNLPGEIGQLTNLEILQLRETMIKVLPREITN-----LRKLTDLDLS 627

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQ 393
            N     +T  E+++ +A       + L +   +L  +P E+  + G +  LD+S N + 
Sbjct: 628 LN---NMTTVPEEVLELANL-----RTLEIMYNHLQTLPPELGNKLGRLKNLDVSHNKLT 679

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           +LPP ++    L+ L LS NK+   P+ +L  L  L  L    N L
Sbjct: 680 KLPPSIAKLVELRQLDLSCNKLPHIPEEVL-RLPHLKFLSFGYNKL 724



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 4/275 (1%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           N   L  L V  N+L+  P  + + +  L  L++S N I  IP  I + T L       N
Sbjct: 455 NFSSLITLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVN 514

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            ++ +P S+G   NL         I  LPE+L     +  L +  N   VL + +I   T
Sbjct: 515 PIEVIPRSIGVLENLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPD-VIFQMT 573

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           ML +L  +   +  +P  IG L+ L  L L +  I  +P  I+    L +  +  N ++ 
Sbjct: 574 MLRKLDLNFIRMTNLPGEIGQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTT 633

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +P E+ +L+ L TL++  N L+    E      RL  LD+S+N L+ LPP I K+  LR+
Sbjct: 634 VPEEVLELANLRTLEIMYNHLQTLPPELGNKLGRLKNLDVSHNKLTKLPPSIAKLVELRQ 693

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           L L+ N L  +   ++  P    L +  ++L  +E
Sbjct: 694 LDLSCNKLPHIPEEVLRLPHLKFLSFGYNKLTNDE 728



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 166/365 (45%), Gaps = 48/365 (13%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +++RL+L++  I S+P  I     L    +  N L  LPAE G+L  L  L L  N+L+ 
Sbjct: 296 KVLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGELRDLQYLTLSFNRLQR 355

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                  L  L +LDL +N L+ LP    K+  L  L ++ N L +L      G     L
Sbjct: 356 LPDTFGNLTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGF--GDHFHRL 413

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           ++L   L  N+ S   +++  L+ MA            +G   S + +       +  L 
Sbjct: 414 EFLN--LENNQLSSPPSSEGLLMPMANEDD--------DGNTHSLVITPQSNFSSLITLR 463

Query: 387 LSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +  N +   PP L     +L  L LSRN+I   P AI T+L++L  L L  NP+  +P  
Sbjct: 464 VGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAI-TNLTNLRLLYLGVNPIEVIP-- 520

Query: 446 GFKDIPMLQ---ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
             + I +L+   +L +    IA LPE    + L +L+ LYLR+   R  P  I ++  LR
Sbjct: 521 --RSIGVLENLYVLGIHQTFIADLPEE--LTLLHNLETLYLRKNAFRVLPDVIFQMTMLR 576

Query: 502 ILDLS-----------------------QNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            LDL+                       +  ++ +P    NL  LT+LDLS NN++ +P 
Sbjct: 577 KLDLNFIRMTNLPGEIGQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTTVPE 636

Query: 539 ELVSV 543
           E++ +
Sbjct: 637 EVLEL 641



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L +    I  L E+L  L  L  L +  N    LP  I ++ ML+ LD++F  +  
Sbjct: 528 NLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQMTMLRKLDLNFIRMTN 587

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L         +K LP  +     L+D   S N +T++PE++ + + +  L
Sbjct: 588 LPGEIGQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRTL 647

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N L  L   L      L  L  S N L  +P +I  L  L +LDL  N++  IP  
Sbjct: 648 EIMYNHLQTLPPELGNKLGRLKNLDVSHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEE 707

Query: 226 ISGCCSLAEFYMGNNALS 243
           +     L     G N L+
Sbjct: 708 VLRLPHLKFLSFGYNKLT 725



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 43  EAVDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDV 98
           E  +L+KL    L+ NN+  + E++  L  L  L + +N L  LP  +G +L  LK+LDV
Sbjct: 614 EITNLRKLTDLDLSLNNMTTVPEEVLELANLRTLEIMYNHLQTLPPELGNKLGRLKNLDV 673

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           S N + K+P  I     L + D S N+L  +P  + R  +L       N +T+
Sbjct: 674 SHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEEVLRLPHLKFLSFGYNKLTN 726


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL 380



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 348

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 349 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 165

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 166 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 74

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 75  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 96

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 97  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 132

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 133 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 160

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 161 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 219

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 220 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 276

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 277 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 323


>gi|66799847|ref|XP_628849.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|122056492|sp|Q54AX5.1|LRRA_DICDI RecName: Full=Leucine-rich repeat protein lrrA
 gi|7673365|gb|AAF66828.1| leucine-rich-repeat protein lrrA [Dictyostelium discoideum]
 gi|60462184|gb|EAL60413.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 510

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 215/480 (44%), Gaps = 76/480 (15%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E VDL+K+     NI+KL   +  L    +L +S N L  +P  IG+L  ++ +D + N 
Sbjct: 18  EIVDLRKM-----NIDKLPPTIGALQCKELL-LSENDLITIPEEIGKLSKVEIIDFAKNR 71

Query: 103 IMKIPDEIGS------------------------------------------------AT 114
           I  IP EIGS                                                  
Sbjct: 72  INYIPPEIGSLATLKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQLDDLPVEISNCE 131

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           AL   D S NQL+  P   G+  NL  F  S N + SLP +++   K+ +L+V  N+L  
Sbjct: 132 ALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLAF 191

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L N  I    +L+ L    N L  +PE + S+  L  LDL  N  L     +S    L  
Sbjct: 192 LPNQ-ICLLGLLSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLKI 250

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPP 292
             + N  ++ LP  LG LS+L  LD+  N QLKE   + A  + L  LDL  N++  +P 
Sbjct: 251 LSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPR 310

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+G +  L+ L L  N L     ++ N P+         +L  + +   +   E    +A
Sbjct: 311 EVGNLINLQTLDLRQNKL-----TIDNIPSEIGKLVNLKKLLLSNNLLIALPPE----IA 361

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
           +  ++  KE       L AIP+EI E   +TK++LS N +  +P    + + LQ   L  
Sbjct: 362 SMKAL--KEFEASNNQLQAIPTEIGELSGLTKINLSGNKLTSIPASFGNLSELQICDLKS 419

Query: 413 NKIKDWPDAILTSLSSL-SCLKLD--NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           N+I + P    T+L  L SC K+D  +N L ++P + F D+  L ILD+ +N  ++P NP
Sbjct: 420 NEIAELP----TTLDGLKSCTKIDLSHNMLTELPWE-FGDLIGLTILDVGHNPLTIPPNP 474



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 206/434 (47%), Gaps = 38/434 (8%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D     + +LP ++G  L   +   S N + ++PE++   SK+  +D   N++  +    
Sbjct: 21  DLRKMNIDKLPPTIG-ALQCKELLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPE- 78

Query: 180 IASWTMLTELIASKNLLNGMPET--IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           I S   L +L  S N L   P T  IG+L  L RLDL  N++  +P  IS C +L    +
Sbjct: 79  IGSLATLKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQLDDLPVEISNCEALEYLDI 138

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGK 296
            +N L + P E GKL  L   +   N LK    E +  ++L  L++SNN L+ LP +I  
Sbjct: 139 SDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLAFLPNQICL 198

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-----ITM 351
           +  L  L +  N L+                    +LPE   S  S T  DL     +  
Sbjct: 199 LGLLSTLNVGFNKLQ--------------------QLPEELSSMVSLTNLDLKVNPPLQY 238

Query: 352 ATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQTL 408
             +LS     K LS+  + ++ +P  +    E+ +LD+  N  ++E+P ++++  +LQ L
Sbjct: 239 VPQLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKL 298

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR--QVPSDGFKDIPMLQILDLSYNIASLP 466
            L  N ++  P  +  +L +L  L L  N L    +PS+  K + + ++L  +  + +LP
Sbjct: 299 DLFGNNMRIVPREV-GNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALP 357

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
             P  +S+  L+E      QL+  PT+I  L  L  ++LS N L SIP  F NL+ L   
Sbjct: 358 --PEIASMKALKEFEASNNQLQAIPTEIGELSGLTKINLSGNKLTSIPASFGNLSELQIC 415

Query: 527 DLSDNNISALPPEL 540
           DL  N I+ LP  L
Sbjct: 416 DLKSNEIAELPTTL 429



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 43/357 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            N S  SL+ +P+E+            W   V L++L +++N +  L   +  L LL+ L
Sbjct: 159 FNCSKNSLKSLPSEI----------SGW---VKLEELNVSNNQLAFLPNQICLLGLLSTL 205

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFN-----------------------SIMKIPDEI 110
           NV  NKL +LP  +  +  L +LD+  N                        I  +P  +
Sbjct: 206 NVGFNKLQQLPEELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRNLQITHLPLGL 265

Query: 111 GSATALVKFDCSSN-QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           G  + L++ D   N QLKE+P  +   +NL       N +  +P ++ +   +  LD+  
Sbjct: 266 GLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREVGNLINLQTLDLRQ 325

Query: 170 NKLTVLSNNL---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           NKLT+  +N+   I     L +L+ S NLL  +P  I S+  L   +   N++ +IP+ I
Sbjct: 326 NKLTI--DNIPSEIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFEASNNQLQAIPTEI 383

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                L +  +  N L+++PA  G LS+L   DL SN++ E       L+  + +DLS+N
Sbjct: 384 GELSGLTKINLSGNKLTSIPASFGNLSELQICDLKSNEIAELPTTLDGLKSCTKIDLSHN 443

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            L+ LP E G +  L  L +  NPL    + +V   T +++++L+    E    + S
Sbjct: 444 MLTELPWEFGDLIGLTILDVGHNPLTIPPNPIVMKGTESIIQWLKKNEKEGRKGKVS 500



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 163/363 (44%), Gaps = 50/363 (13%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           +DL +  I  +P +I G     E  +  N L  +P E+GKLSK+  +D   N++     E
Sbjct: 20  VDLRKMNIDKLPPTI-GALQCKELLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPE 78

Query: 272 ACQL-RLSVLDLSNNSLSGLP--PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
              L  L  L LSNN L   P  P IG +  L +L L+ N L  L   + N      L+Y
Sbjct: 79  IGSLATLKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQLDDLPVEISNCEA---LEY 135

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L   + +N+          L  +           +    +L ++PSEI    ++ +L++S
Sbjct: 136 LD--ISDNQLQSFPLEFGKLYNLQV--------FNCSKNSLKSLPSEISGWVKLEELNVS 185

Query: 389 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPS-DG 446
            N +  LP ++     L TL +  NK++  P+  L+S+ SL+ L L  N PL+ VP    
Sbjct: 186 NNQLAFLPNQICLLGLLSTLNVGFNKLQQLPEE-LSSMVSLTNLDLKVNPPLQYVPQLSN 244

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR-RMQLREAPTDILRLQQLRILDL 505
            + + +L I +L   I  LP       L  L EL +R   QL+E P DI  L  L+ LDL
Sbjct: 245 LRQLKILSIRNLQ--ITHLPLG--LGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDL 300

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNIS-------------------------ALPPEL 540
             N+++ +P    NL +L  LDL  N ++                         ALPPE+
Sbjct: 301 FGNNMRIVPREVGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEI 360

Query: 541 VSV 543
            S+
Sbjct: 361 ASM 363


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 184/392 (46%), Gaps = 43/392 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G   +L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P ++
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAV 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +GKL KL  L+   N+L    KE  +  C   L+V  +
Sbjct: 286 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE--IGGC-CGLTVFCV 342

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            +N L+ +P E+ + T L  L + GN L  L  SL      AL       L +N+     
Sbjct: 343 RDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALW------LSDNQ----- 391

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
              + L+T  T     + E  L  + L  +PSE                    P  L+ C
Sbjct: 392 --SQPLLTFQTDTDHATGEKVLTCVLLPQLPSE-----------------PTCPENLARC 432

Query: 403 ASLQTLILSRNKIKD--WPDAILTSLSSLSCL 432
            +L++L+   N + D  W +  +  +S++  L
Sbjct: 433 GALESLV---NDVSDESWNERAVNRVSAIRFL 461



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYR------------YARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +   S 
Sbjct: 275 QNRLAQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSL 327

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 328 PKE--IGGCCGLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTT-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 157/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L  +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALFHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKVDQNRLAQLP-EAVGDCESLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTL 380



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
          Length = 1452

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 199/431 (46%), Gaps = 55/431 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKIL-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GTLKQLTYLDVSKNNIEVVEEGISGCE-SLQDLLLSSNSLQQLPESIGSLKKVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEG 366
           N L  L  S+               L   E+ + S  + E L +   +LS   +  + + 
Sbjct: 286 NQLIYLPDSI-------------GGLISVEELDCSFNEIETLPSSVGQLS-NIRTFAADH 331

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 426
             L+ +PSEI     +T L L  N ++ LP E+     L+ + LS N++K+ P    T L
Sbjct: 332 NFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLP-FTFTKL 390

Query: 427 SSLSCLKLDNN 437
             L+ + L +N
Sbjct: 391 QQLTAMWLSDN 401



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 206/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKILPKTMSRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTLIPGFIGTLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C SLQ L+LS N ++  P++I  SL  ++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESI-GSLKKVTTLKIDENQLIYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLP--------------ENPPFSSLP-------HLQELYLRR 484
              +  ++ LD S+N I +LP              ++   + LP       H+  L+L  
Sbjct: 295 IGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 128/280 (45%), Gaps = 38/280 (13%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATR 354
           MTT R L L   P R LR       T   L Y    L +   E      T E+L   A +
Sbjct: 1   MTTKRNLFLRLVPCRCLRGE---EETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQ 57

Query: 355 LSVTSKEL---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +    K+L         SL   +L+ +P+ I     + +LD+S+N IQE P  + +C  L
Sbjct: 58  IEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVL 117

Query: 406 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 464
             +  S N I   PD   + L +L+ L L++  L  +P++ F  +  LQIL+L  N +  
Sbjct: 118 TVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-FGRLTKLQILELRENQLKI 175

Query: 465 LPE--------------NPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRIL 503
           LP+              +  F+ +P        L+E ++   +L   P  I  L+QL  L
Sbjct: 176 LPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYL 235

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           D+S+N+++ + EG     SL +L LS N++  LP  + S+
Sbjct: 236 DVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSL 275


>gi|428177838|gb|EKX46716.1| hypothetical protein GUITHDRAFT_107493 [Guillardia theta CCMP2712]
          Length = 644

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 149/456 (32%), Positives = 221/456 (48%), Gaps = 46/456 (10%)

Query: 114 TALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLAD-CSKMSKLDVEGNK 171
           ++L      +N L+ LP+ +   L+ L      NN + SLP  + D  S +  L +  N 
Sbjct: 58  SSLFSLYLYNNNLQSLPAGIFDGLSSLQWLHLYNNNLQSLPAGIFDGLSSLQWLHLYNNN 117

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGC 229
           L  L   +    + L EL  + N L  +P  I   LS L  L LH N + S+P+ I  G 
Sbjct: 118 LQSLPAGIFDGLSSLQELYLAFNSLQSLPAGIFDGLSSLQGLHLHNNNLQSLPAGIFDGL 177

Query: 230 CSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNS 286
            SL E ++ NN L +LPA +  +LS L  L LH+N L+     +      L  LDL++NS
Sbjct: 178 SSLQELHLYNNNLQSLPAGIFDRLSSLQGLHLHNNNLQSLPAGIFDGLSSLQRLDLASNS 237

Query: 287 LSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           L  LP  I   +++L+ L L  N L++L + + +G     L  L+      E   AS + 
Sbjct: 238 LQSLPAGIFDGLSSLKWLDLHNNNLQSLPAGIFDG-----LSSLQ------ELDLASNSL 286

Query: 346 EDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSC 402
           + L   +  RLS + + L L   NL ++P+ I++    +  L L +NS+Q LP  +    
Sbjct: 287 QSLPAGIFDRLS-SLQGLDLYNNNLQSLPAGIFDRLSSLQGLILYKNSLQSLPAGIFDGL 345

Query: 403 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 461
           +SLQ L L+ N ++  P  I   LSSL  L L++  L+ +P+  F  +  LQ+L L  N 
Sbjct: 346 SSLQWLDLASNSLQSLPAGIFDGLSSLHDLYLEDMNLQSLPAGIFDGLSSLQLLYLDINN 405

Query: 462 -------------------IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLR 501
                              + SLP    F  L  LQEL L    L+  P  I   L  L+
Sbjct: 406 IGVVPYDRLMSLSYLGLRKVDSLPAGI-FDGLSSLQELDLASNSLQSLPAGIFDGLSSLQ 464

Query: 502 ILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISAL 536
            LDL+ NSLQS+P G F  L+SL  LDL ++NIS +
Sbjct: 465 GLDLASNSLQSLPAGIFDGLSSLQWLDLHNDNISCI 500



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 189/369 (51%), Gaps = 22/369 (5%)

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNA 241
           WT  +  ++S+++ N    T   LS L  L L+ N + S+P+ I  G  SL   ++ NN 
Sbjct: 34  WTCYSLSLSSRDIRNITNGTFDGLSSLFSLYLYNNNLQSLPAGIFDGLSSLQWLHLYNNN 93

Query: 242 LSALPAEL-GKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKM 297
           L +LPA +   LS L  L L++N L+     +      L  L L+ NSL  LP  I   +
Sbjct: 94  LQSLPAGIFDGLSSLQWLHLYNNNLQSLPAGIFDGLSSLQELYLAFNSLQSLPAGIFDGL 153

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           ++L+ L L  N L++L + + +G     L  L+     N + ++         +  RLS 
Sbjct: 154 SSLQGLHLHNNNLQSLPAGIFDG-----LSSLQELHLYNNNLQSLPAG-----IFDRLS- 202

Query: 358 TSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKI 415
           + + L L   NL ++P+ I++    + +LDL+ NS+Q LP  +    +SL+ L L  N +
Sbjct: 203 SLQGLHLHNNNLQSLPAGIFDGLSSLQRLDLASNSLQSLPAGIFDGLSSLKWLDLHNNNL 262

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSL 474
           +  P  I   LSSL  L L +N L+ +P+  F  +  LQ LDL + N+ SLP    F  L
Sbjct: 263 QSLPAGIFDGLSSLQELDLASNSLQSLPAGIFDRLSSLQGLDLYNNNLQSLPAG-IFDRL 321

Query: 475 PHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNN 532
             LQ L L +  L+  P  I   L  L+ LDL+ NSLQS+P G F  L+SL +L L D N
Sbjct: 322 SSLQGLILYKNSLQSLPAGIFDGLSSLQWLDLASNSLQSLPAGIFDGLSSLHDLYLEDMN 381

Query: 533 ISALPPELV 541
           + +LP  + 
Sbjct: 382 LQSLPAGIF 390



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 226/472 (47%), Gaps = 37/472 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN-LPLLT 71
           SL L N +L+ +P  ++                 LQ L L +NN++ L   + + L  L 
Sbjct: 62  SLYLYNNNLQSLPAGIFDGLSS------------LQWLHLYNNNLQSLPAGIFDGLSSLQ 109

Query: 72  VLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKEL 129
            L++ +N L  LPA I + L  L+ L ++FNS+  +P  I    ++L      +N L+ L
Sbjct: 110 WLHLYNNNLQSLPAGIFDGLSSLQELYLAFNSLQSLPAGIFDGLSSLQGLHLHNNNLQSL 169

Query: 130 PSSLGRCLN-LSDFKASNNCITSLPEDLAD-CSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           P+ +   L+ L +    NN + SLP  + D  S +  L +  N L  L   +    + L 
Sbjct: 170 PAGIFDGLSSLQELHLYNNNLQSLPAGIFDRLSSLQGLHLHNNNLQSLPAGIFDGLSSLQ 229

Query: 188 ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
            L  + N L  +P  I   LS L  LDLH N + S+P+ I  G  SL E  + +N+L +L
Sbjct: 230 RLDLASNSLQSLPAGIFDGLSSLKWLDLHNNNLQSLPAGIFDGLSSLQELDLASNSLQSL 289

Query: 246 PAEL-GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD---LSNNSLSGLPPEI-GKMTTL 300
           PA +  +LS L  LDL++N L+         RLS L    L  NSL  LP  I   +++L
Sbjct: 290 PAGIFDRLSSLQGLDLYNNNLQSLPAGIFD-RLSSLQGLILYKNSLQSLPAGIFDGLSSL 348

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPENEDSEASTTKEDLITMATRLS 356
           + L L  N L++L + + +G +     YL       LP     +  ++ + L      + 
Sbjct: 349 QWLDLASNSLQSLPAGIFDGLSSLHDLYLEDMNLQSLPAGI-FDGLSSLQLLYLDINNIG 407

Query: 357 VTSKE----LSLEGM-NLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLI 409
           V   +    LS  G+  + ++P+ I++    + +LDL+ NS+Q LP  +    +SLQ L 
Sbjct: 408 VVPYDRLMSLSYLGLRKVDSLPAGIFDGLSSLQELDLASNSLQSLPAGIFDGLSSLQGLD 467

Query: 410 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
           L+ N ++  P  I   LSSL  L L N+ +  + S  F ++  L  LDL+ N
Sbjct: 468 LASNSLQSLPAGIFDGLSSLQWLDLHNDNISCIFSQAFTNLSSLYYLDLTGN 519


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 314 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 343

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 344 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 397

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 398 LSDNQSK 404



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 196

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 197 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLP-NT 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 355 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 408



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 158 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 215

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 216 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 245



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 34  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 91

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 92  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 127

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 128 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 155

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 156 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 214

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 215 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 271

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 272 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 318


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 314 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 343

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 344 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 397

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 398 LSDNQSK 404



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 196

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 197 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 237 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 355 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 408



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 158 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 215

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 216 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 245



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 34  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 91

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 92  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 127

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 128 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 155

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 156 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 214

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 215 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 271

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 272 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 318


>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
 gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
          Length = 287

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 2/262 (0%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S   L+E+P ++ +L  L  L++  N I ++P+ I   T L     S N++ E+ 
Sbjct: 23  TDLDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEIS 82

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            ++    NL+     NN I  +PE +A  + ++ L++  N+LT +S   IA  T LT L 
Sbjct: 83  EAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISE-AIAQLTNLTTLS 141

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N L  +PE I  L++L  L L +N +  IP  IS   +L E  +  N ++ +P  + 
Sbjct: 142 LSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPKAIT 201

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L+ L  L L +NQ+ E      QL  L  LDLS N L+ +P  I ++T L  L L  NP
Sbjct: 202 QLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNP 261

Query: 310 LRTLRSSLVNGPTPALLKYLRS 331
           L  +  S  +G    L  Y R+
Sbjct: 262 LDPIVHSAYSGGIEELFAYFRN 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 39/294 (13%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           + A  ++ + LD+ G  LT +  + +A  T LT L    N +  +PE+I  L+ L  L L
Sbjct: 15  ETAQKTEATDLDLSGLALTEVPES-VAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYL 73

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +NRI  I  +I+   +L    + NN ++ +P  + +L+ L TL+L  NQL E      Q
Sbjct: 74  SENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQ 133

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L+ L LS N L+ +P  I K+T L  L L  N L                    + +
Sbjct: 134 LTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHL--------------------TEI 173

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P+     A+ T                EL L    ++ +P  I +   +  L L  N I 
Sbjct: 174 PKEISQLANLT----------------ELLLYKNQITKVPKAITQLTNLKMLSLFNNQIT 217

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           E+P  ++   +L+TL LS N++   P++I + L++L  L L  NPL  +    +
Sbjct: 218 EIPEAIAQLTNLETLDLSYNQLTTIPESI-SQLTNLVILSLYQNPLDPIVHSAY 270



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           LR++   + KN   A   +   +  +L  L L+HN + ++ E +  L  LT L++S+N+L
Sbjct: 88  LRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           +E+P AI +L  L SL +  N + +IP EI     L +     NQ+ ++P ++ +  NL 
Sbjct: 148 TEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLK 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                NN IT +PE +A  + +  LD+  N+LT                         +P
Sbjct: 208 MLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTT------------------------IP 243

Query: 201 ETIGSLSRLIRLDLHQN 217
           E+I  L+ L+ L L+QN
Sbjct: 244 ESISQLTNLVILSLYQN 260



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 5/180 (2%)

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 418
           + +L L G+ L+ +P  + +   +T+L+L  N I E+P  ++   +L TL LS N+I + 
Sbjct: 22  ATDLDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEI 81

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
            +AI   L +L+ L L NN + ++P +    +  L  L+LS+N +  + E    + L +L
Sbjct: 82  SEAI-APLRNLTMLILKNNQIAKIP-EAIAQLTNLTTLNLSHNQLTEISE--AIAQLTNL 137

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             L L   QL E P  I +L +L  L L +N L  IP+    L +LTEL L  N I+ +P
Sbjct: 138 TTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVP 197



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 16/266 (6%)

Query: 266 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           KE    A +   + LDLS  +L+ +P  + ++T L +L L  N +  +  S+        
Sbjct: 11  KERIETAQKTEATDLDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTT 70

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +R+   E SEA     +L TM          L L+   ++ IP  I +   +T L
Sbjct: 71  LYLSENRI--TEISEAIAPLRNL-TM----------LILKNNQIAKIPEAIAQLTNLTTL 117

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
           +LS N + E+   ++   +L TL LS N++ + P+AI T L+ L+ L+L  N L ++P +
Sbjct: 118 NLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAI-TKLTKLTSLRLGRNHLTEIPKE 176

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
             +   + ++L     I  +P+    + L +L+ L L   Q+ E P  I +L  L  LDL
Sbjct: 177 ISQLANLTELLLYKNQITKVPK--AITQLTNLKMLSLFNNQITEIPEAIAQLTNLETLDL 234

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDN 531
           S N L +IPE    LT+L  L L  N
Sbjct: 235 SYNQLTTIPESISQLTNLVILSLYQN 260



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 13/114 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L    L ++P E+              +  +L +L+L  N I K+ + +  L  L +
Sbjct: 162 SLRLGRNHLTEIPKEI-------------SQLANLTELLLYKNQITKVPKAITQLTNLKM 208

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L++ +N+++E+P AI +L  L++LD+S+N +  IP+ I   T LV      N L
Sbjct: 209 LSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNPL 262


>gi|403257262|ref|XP_003921246.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Saimiri boliviensis boliviensis]
          Length = 860

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 139/557 (24%), Positives = 250/557 (44%), Gaps = 63/557 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  +  +P E+              +  ++++L L +N IE    DL  L  L +L
Sbjct: 216 LNVSHNHISHIPKEM-------------LQLGNIRQLFLNNNYIENFPSDLECLGNLEIL 262

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  LP  +  L  L+ L++ +N +   P  +     L+  D + N +  LP  +
Sbjct: 263 SLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               +L      +N +T L  ++    K+ +L +  NKL V+S+  I ++  L  LI  K
Sbjct: 323 RELKHLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHK-IENFRELRILILDK 381

Query: 194 NLLNGMPETIG-----------------------SLSRLIRLDLHQNRILSIPSSISGCC 230
           N+L  +PE I                         L  L +L +++N ++ I  +IS   
Sbjct: 382 NILKNIPEKISYCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLN 441

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           ++       N ++++P E+    K+  ++L+ N++  + V  C L  L  L ++ N +S 
Sbjct: 442 NICSIEFSGNIITSVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLYYLSVNGNYISE 501

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +I     L  L L  N L        SL+N      LKYL   L +N+  +   +  
Sbjct: 502 IPVDISFSKQLLHLELNENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASIS 553

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++I++   +   +K            P E+     +  LDLS N +Q++  ++ +   +Q
Sbjct: 554 NMISLHVLILCCNK--------FETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQ 605

Query: 407 TLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 463
            L  S N+   +P  +  L SL  L+  ++    L  +P +   ++  L+ LD+S N I 
Sbjct: 606 KLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTILPGE-LSNMTQLKELDISNNAIR 664

Query: 464 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 523
            +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL
Sbjct: 665 EIPRN--IGELRNLVSLHAHNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSDIYNLFSL 722

Query: 524 TELDLSDNNISALPPEL 540
            E++  DN +   P E+
Sbjct: 723 KEINFDDNPLLRPPMEI 739



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 246/553 (44%), Gaps = 58/553 (10%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNF---DEAGEGDKWWEAVDLQKLILAHNN------- 56
           + RT  S +LS+ + R    +   NF   D AGE        + ++L L  +N       
Sbjct: 91  STRTETSQSLSSLTGRIAEYQALVNFLSHDTAGEVSPQVSEENQKQLSLEADNFTVNLEA 150

Query: 57  --IEKLKEDLRNLPLLTVLNVSHNKLSELPAA-IGELHMLKSLDVSFNSIMKIPDEIGSA 113
             +++  +D+  +  +  L +  N++     A  G+L  L+SL +  N +  +P EI   
Sbjct: 151 KGLQEFPKDILKIKYVKYLYLDKNQIRTFQGADSGDLLGLESLSLQENGLSSLPSEIQLL 210

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   + S N +  +P  + +  N+     +NN I + P DL +C         GN L 
Sbjct: 211 HNLRILNVSHNHISHIPKEMLQLGNIRQLFLNNNYIENFPSDL-ECL--------GN-LE 260

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           +LS                KN L  +P+T+ SL  L  L+L  N++   P ++     L 
Sbjct: 261 ILS--------------LGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLI 306

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
              +  N +S+LP E+ +L  L TL L  N+L    VE  QL ++  L L++N L  +  
Sbjct: 307 SLDLTGNLISSLPKEIRELKHLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISH 366

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +I     LR L+L  N L+ +   +      A+L+ L   L +N+ +E       L  + 
Sbjct: 367 KIENFRELRILILDKNILKNIPEKI---SYCAMLECLS--LSDNKLTELPKNIHKLKNL- 420

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
                  ++L +   N+  I   I     I  ++ S N I  +P E+ +C  +  + L+ 
Sbjct: 421 -------RKLHVNRNNMVKINDNISHLNNICSIEFSGNIITSVPIEIKNCQKITKVELNY 473

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASL-PENPP 470
           NKI  +P   L +L SL  L ++ N + ++P D  F      Q+L L  N   L   +  
Sbjct: 474 NKIMYFPVG-LCALDSLYYLSVNGNYISEIPVDISFSK----QLLHLELNENKLLIFSEH 528

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           F SL +L+ L L + Q+++ P  I  +  L +L L  N  ++ P     L +L  LDLS+
Sbjct: 529 FCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSE 588

Query: 531 NNISALPPELVSV 543
           N +  +  ++ ++
Sbjct: 589 NQLQKISSDICNL 601



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L++S NKL+ELP  I +L  L+ L V+ N+++K
Sbjct: 373 ELRILILDKNILKNIPEKISYCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVK 432

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  ++  + + N I   P  L     +  L
Sbjct: 433 INDNISHLNNICSIEFSGNIITSVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLYYL 492

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  ++N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 493 SVNGNYISEIPVDISFSKQLL-HLELNENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 551

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 552 ISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSS 611

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 612 NQFIHFPIELCQLQSLEQLNISQIKGRKLTILPGELSNMTQLKELDISNNAIREI----- 666

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS+I+
Sbjct: 667 ----PRNIGELRNLVSLHAHNNQISYLPPSLLSLNDL-----QQLNLSGNNLTALPSDIY 717

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 718 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 750



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 8/226 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
            + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD
Sbjct: 526 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLD 585

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSL 152
           +S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T L
Sbjct: 586 LSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTIL 643

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L
Sbjct: 644 PGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAHNNQISYLPPSLLSLNDLQQL 702

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +L  N + ++PS I    SL E    +N L   P E+ K  +L T+
Sbjct: 703 NLSGNNLTALPSDIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 149 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 208

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 209 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 268

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 269 KVDQNRLTQLPE-AVGDCESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKE 327

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 328 IGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 387

Query: 286 S 286
            
Sbjct: 388 Q 388



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 188/417 (45%), Gaps = 70/417 (16%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL  VP E+Y+             A  L++L+L  N + +L E    L  L  L +S N+
Sbjct: 20  SLVYVPEEIYR------------YARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNE 67

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  LP  I     L  LDVS N I +IP+ I    AL   D S N L  LP S     NL
Sbjct: 68  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNL 127

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------------- 179
           +    ++  + SLPE++ +   ++ L++  N LT L ++L                    
Sbjct: 128 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 187

Query: 180 --IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
             I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +
Sbjct: 188 ESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVI 247

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
             N L  +P  +GKL K                      LS+L +  N L+ LP  +G  
Sbjct: 248 SQNLLEMIPDGIGKLKK----------------------LSILKVDQNRLTQLPEAVGDC 285

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L +L+LT N L TL  S+        LK L + L  + +   S  KE  I     L+V
Sbjct: 286 ESLTELVLTENRLLTLPKSI------GKLKKL-NNLNADRNKLVSLPKE--IGGCCSLTV 336

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
                 +    LS IP+E+ +A E+  LD++ N +  LP  L++   L+ L LS N+
Sbjct: 337 ----FCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLPLSLTA-LKLKALWLSDNQ 388



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 158/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 35  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 94

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 95  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 154

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 155 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 201

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 202 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGI-G 260

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 261 KLKKLSILKVDQNRLTQLP-EAVGDCESLTELVLTENRLLTLPKS--IGKLKKLNNLNAD 317

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 318 RNKLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL 377



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 471 FSSLP---HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           F  +P    L+ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L
Sbjct: 2   FHCIPLWRXLETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKL 61

Query: 527 DLSDNNISALPPELVSV 543
            LSDN I  LPPE+ + 
Sbjct: 62  GLSDNEIQRLPPEIANF 78


>gi|170092737|ref|XP_001877590.1| adenylate cyclase [Laccaria bicolor S238N-H82]
 gi|164647449|gb|EDR11693.1| adenylate cyclase [Laccaria bicolor S238N-H82]
          Length = 1533

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 167/579 (28%), Positives = 254/579 (43%), Gaps = 86/579 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNF---------DEAGE-GDKWWEAV-DLQKLILAHNNIEKLKE 62
           L LSN +++ VP  V  +          +  G+  D + E +  L  L + +N IEKL  
Sbjct: 255 LRLSNMAMKKVPQSVRHSTTLHRLDLSSNRLGDLEDAYLEHIPGLITLYIQNNRIEKLPW 314

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS---------- 112
               L  LT LN+S+NK   LP  I +L  L+ LD+SFN I +IP+EIG           
Sbjct: 315 HFPRLRSLTTLNLSNNKFQTLPILITQLENLRDLDISFNMISEIPEEIGQLQNLERLIIV 374

Query: 113 ATALVKF-------------DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
              +VKF             DC  NQ+ +L + +     L+   A +N I  L  DLA  
Sbjct: 375 GNQVVKFPRECADLKRLRILDCRRNQISDL-TVICALPQLNQLSADHNSIHGL--DLALG 431

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM---LTELIASKNLLNGMPET-IGSLSRLIRLDLH 215
             +++LDV  N +T +S   +    M   LT L  S   L+ + +  +G LS L+ L+L 
Sbjct: 432 VHLTRLDVSHNDITQVSLVPVGGPMMAYALTSLDLSYAKLSSLEDVALGCLSTLLTLNLA 491

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N   S+P ++     L    + +N L ALP+ +G+L KL  LD H              
Sbjct: 492 HNSFRSLPDTLGDLSWLETLSVSDNKLDALPSSIGRLQKLEFLDAH-------------- 537

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
                   NNSL+ LP  +     L K+ +T N L +     VN                
Sbjct: 538 --------NNSLTELPQSLWNCANLTKINVTSNFLGSWHDPPVNVGVVQQEPPPPLPPQA 589

Query: 336 NEDSEASTTKEDLITMATRLSVTSK----ELSLEGMNLSA--------IPSEIWEAGEIT 383
            E++  S    +  T  T L+VT        SLE + L           P  I++  E+ 
Sbjct: 590 AENNTLSVPAIERKTSTTSLTVTGNLPPLVYSLEKLYLGENRLTDDVLHPLMIFK--ELK 647

Query: 384 KLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
            L+LS N IQELPP    +   L+ L LS N++   P   L  L  LS L L+ N L+ +
Sbjct: 648 VLNLSFNEIQELPPSFFRNMTQLEELYLSGNRLASIPTEDLPKLKCLSTLFLNGNKLQTL 707

Query: 443 PSD--GFKDIPMLQILD--LSYNIASLPENPPFSSLPHLQELYL---RRMQLREAPTDIL 495
           P +    K++  L +    L YNI +   +  ++   +L+ L L   +R+Q++  PT + 
Sbjct: 708 PQELCKAKNLTNLDVGSNLLKYNINNWEFDWNWNFNKNLKYLNLSGNKRLQIKAEPTRLY 767

Query: 496 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
              +L   D +    +++  GF +LT L  L L D  I+
Sbjct: 768 SNHRLSSRDPTAIGRRTL-SGFTDLTQLRVLGLMDVTIT 805



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 209/489 (42%), Gaps = 55/489 (11%)

Query: 73  LNVSHNKLSELP-AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           L +S N + E+P   I    +L+ L +S  ++ K+P  +  +T L + D SSN+L +L  
Sbjct: 231 LKLSRNPMLEIPLDFIQSCSVLRELRLSNMAMKKVPQSVRHSTTLHRLDLSSNRLGDLED 290

Query: 132 S-LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           + L     L      NN I  LP        ++ L++  NK   L   LI     L +L 
Sbjct: 291 AYLEHIPGLITLYIQNNRIEKLPWHFPRLRSLTTLNLSNNKFQTLP-ILITQLENLRDLD 349

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N+++ +PE IG L  L RL +  N+++  P                        E  
Sbjct: 350 ISFNMISEIPEEIGQLQNLERLIIVGNQVVKFPR-----------------------ECA 386

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L +L  LD   NQ+ +  V     +L+ L   +NS+ GL   +G    L +L ++ N +
Sbjct: 387 DLKRLRILDCRRNQISDLTVICALPQLNQLSADHNSIHGLDLALG--VHLTRLDVSHNDI 444

Query: 311 RTLRSSLVNGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------- 359
             +    V GP  A     L    ++L   ED         L       S  S       
Sbjct: 445 TQVSLVPVGGPMMAYALTSLDLSYAKLSSLEDVALGCLSTLLTLNLAHNSFRSLPDTLGD 504

Query: 360 ----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               + LS+    L A+PS I    ++  LD   NS+ ELP  L +CA+L  + ++ N +
Sbjct: 505 LSWLETLSVSDNKLDALPSSIGRLQKLEFLDAHNNSLTELPQSLWNCANLTKINVTSNFL 564

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
             W D  +     +   +       Q   +    +P ++    + ++      PP   + 
Sbjct: 565 GSWHDPPVN--VGVVQQEPPPPLPPQAAENNTLSVPAIERKTSTTSLTVTGNLPPL--VY 620

Query: 476 HLQELYLRRMQLREAPTDILR----LQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSD 530
            L++LYL   +L +   D+L      ++L++L+LS N +Q +P   F+N+T L EL LS 
Sbjct: 621 SLEKLYLGENRLTD---DVLHPLMIFKELKVLNLSFNEIQELPPSFFRNMTQLEELYLSG 677

Query: 531 NNISALPPE 539
           N ++++P E
Sbjct: 678 NRLASIPTE 686



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 62/343 (18%)

Query: 209 LIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           ++ L L +N +L IP   I  C  L E  + N A+  +P  +   + L  LDL SN+L +
Sbjct: 228 IVSLKLSRNPMLEIPLDFIQSCSVLRELRLSNMAMKKVPQSVRHSTTLHRLDLSSNRLGD 287

Query: 268 YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
             +E   L     L  L + NN +  LP    ++ +L  L L+ N  +TL         P
Sbjct: 288 --LEDAYLEHIPGLITLYIQNNRIEKLPWHFPRLRSLTTLNLSNNKFQTL---------P 336

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
            L+  L                E+L           ++L +    +S IP EI +   + 
Sbjct: 337 ILITQL----------------ENL-----------RDLDISFNMISEIPEEIGQLQNLE 369

Query: 384 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +L +  N + + P E +    L+ L   RN+I D    ++ +L  L+ L  D+N +  + 
Sbjct: 370 RLIIVGNQVVKFPRECADLKRLRILDCRRNQISDL--TVICALPQLNQLSADHNSIHGL- 426

Query: 444 SDGFKDIPM---LQILDLSYN----IASLPENPPF--SSLPHLQELYLRRMQLREAPTDI 494
                D+ +   L  LD+S+N    ++ +P   P    +L  L   Y +   L +     
Sbjct: 427 -----DLALGVHLTRLDVSHNDITQVSLVPVGGPMMAYALTSLDLSYAKLSSLEDVALGC 481

Query: 495 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L    L  L+L+ NS +S+P+   +L+ L  L +SDN + ALP
Sbjct: 482 L--STLLTLNLAHNSFRSLPDTLGDLSWLETLSVSDNKLDALP 522



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 2/157 (1%)

Query: 385 LDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 443
           +DL+  S++ +P  L   A S+ +L LSRN + + P   + S S L  L+L N  +++VP
Sbjct: 207 IDLTGRSLRTIPVILHQHAHSIVSLKLSRNPMLEIPLDFIQSCSVLRELRLSNMAMKKVP 266

Query: 444 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 503
               +    L  LDLS N     E+     +P L  LY++  ++ + P    RL+ L  L
Sbjct: 267 Q-SVRHSTTLHRLDLSSNRLGDLEDAYLEHIPGLITLYIQNNRIEKLPWHFPRLRSLTTL 325

Query: 504 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           +LS N  Q++P     L +L +LD+S N IS +P E+
Sbjct: 326 NLSNNKFQTLPILITQLENLRDLDISFNMISEIPEEI 362


>gi|426246387|ref|XP_004016976.1| PREDICTED: protein LAP2 [Ovis aries]
          Length = 1371

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 195/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+               L   E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYLPDSI-------------GGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     IT L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 203/474 (42%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 ISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S N + +LP +                     P   +  ++  L+L  
Sbjct: 295 IGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHNYLQQLPPEIGNWKNITVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+A+P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTALPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 348

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 349 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 165

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 166 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 74

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 75  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 96

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 97  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 132

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 133 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 160

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 161 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 219

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 220 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 276

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 277 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 323


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 43  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 90

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 91  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 150

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 151 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 210

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 211 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 269

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 270 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 329

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 330 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 359

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 360 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 413

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 414 LSDNQSK 420



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 297 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 356 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 415

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 416 DNQSKALIP 424



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 35  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 94

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 95  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 130

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 131 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 176

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 177 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 212

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 213 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 253 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 310

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 311 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 370

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 371 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 424



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 32  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 85

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 86  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 115

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 116 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 173

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 174 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 231

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 232 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 261



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 50  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 107

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 108 --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 143

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 144 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 171

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 172 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 230

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 231 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 287

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 288 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 334


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 43  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 90

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 91  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 150

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 151 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 210

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 211 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 269

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 270 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 329

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 330 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 359

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 360 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 413

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 414 LSDNQSK 420



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 297 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 356 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 415

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 416 DNQSKALIP 424



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 35  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 94

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 95  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 130

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 131 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 176

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 177 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 212

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 213 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 253 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 310

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 311 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 370

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 371 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 424



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 32  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 85

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 86  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 115

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 116 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 173

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 174 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 231

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 232 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 261



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 50  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 107

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 108 --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 143

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 144 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 171

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 172 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 230

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 231 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 287

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 288 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 334


>gi|167387178|ref|XP_001738053.1| leucine-rich repeat containing protein [Entamoeba dispar SAW760]
 gi|165898880|gb|EDR25633.1| leucine-rich repeat containing protein, putative [Entamoeba dispar
           SAW760]
          Length = 850

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 249/504 (49%), Gaps = 47/504 (9%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I KLK  L++L L      S N+++ L  +     +L  L +  N   K PD I    
Sbjct: 20  NEIMKLKHSLKSLDL------SLNQINSLEPSFSNFSLLTLLRLRGNKFNKFPDPILDLQ 73

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L   D S+NQ+  +PS++    NLS+     N +T+LP+++   + +  +    NKL  
Sbjct: 74  SLKCLDLSNNQITYIPSNIICLNNLSELIMGQNNLTTLPKEIGIMTTLVNITFPANKLKE 133

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   + +S T LT +  S N  N  P+ +G LS +  L +  N +  +   I G   L +
Sbjct: 134 LPLEM-SSLTKLTFVDLSNNNFNKFPQVLGKLSNIRTLWMFYNNLTKL-KGIEGIKHLNQ 191

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             + NN  + +P E+  L++L +L+L +N +++   E  +L+ L  +  +N  +  +P E
Sbjct: 192 LKLLNNKFTQIPKEIFNLTELCSLELDNNLIRKIPREIKELKKLKEIAFTNCLIQKIPEE 251

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED--------SEASTTK 345
           I  ++ L+++++       +RS +   P     K+LR ++P+  +        +E + T 
Sbjct: 252 IIALSNLQEIII-------VRSRVNEFP-----KFLR-KIPKISNLIITDSLITEVNCTL 298

Query: 346 EDLITMA-----TRLSVTSKE----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL- 395
            +   +      T +  T  +    L+L    L  IP+       I +L L+ N IQ++ 
Sbjct: 299 NNCCIILENNKLTEIKCTPNDNVFILNLCNNYLKKIPNT-RNLQTINELYLTNNFIQQIE 357

Query: 396 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 455
             EL S   ++ L L+ NK+  +P+  + S + L  L L NN + Q+P++ F  +P L+I
Sbjct: 358 QSELHS--DIKILTLASNKLISFPEKGI-SYNKLKELNLSNNKISQLPNNLFLFLPYLKI 414

Query: 456 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L  N + ++P +   S L  L+EL L   +L E P DIL+L  L  L L+ N +  +P
Sbjct: 415 LKLGINQLTTIPNS--ISILNQLEELNLSHNKLTEFPLDILKLTSLTNLYLTNNYICDLP 472

Query: 515 EGFKNLTSLTELDLSDNNISALPP 538
           +    L +L  +D S+NNI+++ P
Sbjct: 473 KNLSQLNNLQIVDFSNNNINSIFP 496



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 213/426 (50%), Gaps = 49/426 (11%)

Query: 140 SDFKASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           ++F A +   T +P ++      +  LD+  N++  L  +  +++++LT L    N  N 
Sbjct: 6   TNFVAKSKGYTCIPNEIMKLKHSLKSLDLSLNQINSLEPSF-SNFSLLTLLRLRGNKFNK 64

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
            P+ I  L  L  LDL  N+I  IPS+I    +L+E  MG N L+ LP E+G ++ L  +
Sbjct: 65  FPDPILDLQSLKCLDLSNNQITYIPSNIICLNNLSELIMGQNNLTTLPKEIGIMTTLVNI 124

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
              +N+LKE  +E   L +L+ +DLSNN+ +  P  +GK++ +R L +  N L  L+   
Sbjct: 125 TFPANKLKELPLEMSSLTKLTFVDLSNNNFNKFPQVLGKLSNIRTLWMFYNNLTKLKG-- 182

Query: 318 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           + G     +K+L   +L  N+ ++      +L  + +        L L+   +  IP EI
Sbjct: 183 IEG-----IKHLNQLKLLNNKFTQIPKEIFNLTELCS--------LELDNNLIRKIPREI 229

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP---------------DA 421
            E  ++ ++  +   IQ++P E+ + ++LQ +I+ R+++ ++P               D+
Sbjct: 230 KELKKLKEIAFTNCLIQKIPEEIIALSNLQEIIIVRSRVNEFPKFLRKIPKISNLIITDS 289

Query: 422 ILTSLSSL---SCLKLDNNPLRQV---PSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
           ++T ++      C+ L+NN L ++   P+D       + IL+L  N   L + P   +L 
Sbjct: 290 LITEVNCTLNNCCIILENNKLTEIKCTPNDN------VFILNLCNN--YLKKIPNTRNLQ 341

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
            + ELYL    +++     L    ++IL L+ N L S PE   +   L EL+LS+N IS 
Sbjct: 342 TINELYLTNNFIQQIEQSELH-SDIKILTLASNKLISFPEKGISYNKLKELNLSNNKISQ 400

Query: 536 LPPELV 541
           LP  L 
Sbjct: 401 LPNNLF 406



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 192/418 (45%), Gaps = 27/418 (6%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +LI+  NN+  L +++  +  L  +    NKL ELP  +  L  L  +D+S N+  K
Sbjct: 97  NLSELIMGQNNLTTLPKEIGIMTTLVNITFPANKLKELPLEMSSLTKLTFVDLSNNNFNK 156

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +G  + +       N L +L    G   +L+  K  NN  T +P+++ + +++  L
Sbjct: 157 FPQVLGKLSNIRTLWMFYNNLTKLKGIEG-IKHLNQLKLLNNKFTQIPKEIFNLTELCSL 215

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N +  +    I     L E+  +  L+  +PE I +LS L  + + ++R+   P  
Sbjct: 216 ELDNNLIRKIPRE-IKELKKLKEIAFTNCLIQKIPEEIIALSNLQEIIIVRSRVNEFPKF 274

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSN 284
           +     ++   + ++ ++ +   L     +    L +N+L E  C       + +L+L N
Sbjct: 275 LRKIPKISNLIITDSLITEVNCTLNNCCII----LENNKLTEIKCTP--NDNVFILNLCN 328

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  + P    + T+ +L LT N ++ +  S ++     +L    ++L    +   S  
Sbjct: 329 NYLKKI-PNTRNLQTINELYLTNNFIQQIEQSELHSDI-KILTLASNKLISFPEKGISYN 386

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK-LDLSRNSIQELPPELSSCA 403
           K              KEL+L    +S +P+ ++      K L L  N +  +P  +S   
Sbjct: 387 K-------------LKELNLSNNKISQLPNNLFLFLPYLKILKLGINQLTTIPNSISILN 433

Query: 404 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 461
            L+ L LS NK+ ++P  IL  L+SL+ L L NN +  +P +    +  LQI+D S N
Sbjct: 434 QLEELNLSHNKLTEFPLDIL-KLTSLTNLYLTNNYICDLPKN-LSQLNNLQIVDFSNN 489



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 43/329 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL L N  +R +P E+   K   E    +   + +        +LQ++I+  + + +  +
Sbjct: 214 SLELDNNLIRKIPREIKELKKLKEIAFTNCLIQKIPEEIIALSNLQEIIIVRSRVNEFPK 273

Query: 63  DLRNLP----------LLTVLNVS---------HNKLSELPAAIGELHMLKSLDVSFNSI 103
            LR +P          L+T +N +         +NKL+E+     +   +  L++  N +
Sbjct: 274 FLRKIPKISNLIITDSLITEVNCTLNNCCIILENNKLTEIKCTPNDNVFI--LNLCNNYL 331

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK----ASNNCITSLPEDLADC 159
            KIP+     T + +   ++N ++++  S       SD K    ASN  I S PE     
Sbjct: 332 KKIPNTRNLQT-INELYLTNNFIQQIEQSELH----SDIKILTLASNKLI-SFPEKGISY 385

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +K+ +L++  NK++ L NNL      L  L    N L  +P +I  L++L  L+L  N++
Sbjct: 386 NKLKELNLSNNKISQLPNNLFLFLPYLKILKLGINQLTTIPNSISILNQLEELNLSHNKL 445

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-YCVEACQLRLS 278
              P  I    SL   Y+ NN +  LP  L +L+ L  +D  +N +   + +  C   + 
Sbjct: 446 TEFPLDILKLTSLTNLYLTNNYICDLPKNLSQLNNLQIVDFSNNNINSIFPIIKCT-TIK 504

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            L L+ N    +P E+  M  L+ +   G
Sbjct: 505 SLSLAFNKNLHIPSELTLMKQLKNINFIG 533



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 18/257 (7%)

Query: 288 SGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           + +P EI K+  +L+ L L+ N + +L  S  N     LL     RL  N+ ++      
Sbjct: 16  TCIPNEIMKLKHSLKSLDLSLNQINSLEPSFSNFSLLTLL-----RLRGNKFNKFPDPIL 70

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           DL ++        K L L    ++ IPS I     +++L + +N++  LP E+    +L 
Sbjct: 71  DLQSL--------KCLDLSNNQITYIPSNIICLNNLSELIMGQNNLTTLPKEIGIMTTLV 122

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            +    NK+K+ P   ++SL+ L+ + L NN   + P      +  ++ L + YN  +L 
Sbjct: 123 NITFPANKLKELPLE-MSSLTKLTFVDLSNNNFNKFP-QVLGKLSNIRTLWMFYN--NLT 178

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
           +      + HL +L L   +  + P +I  L +L  L+L  N ++ IP   K L  L E+
Sbjct: 179 KLKGIEGIKHLNQLKLLNNKFTQIPKEIFNLTELCSLELDNNLIRKIPREIKELKKLKEI 238

Query: 527 DLSDNNISALPPELVSV 543
             ++  I  +P E++++
Sbjct: 239 AFTNCLIQKIPEEIIAL 255


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 194/439 (44%), Gaps = 58/439 (13%)

Query: 5    LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
            L+  R SG     N++L  +P    +NFD           ++L++L++ ++ I  L E++
Sbjct: 715  LEFLRLSG-----NKNLETLP----ENFDNL---------INLKQLVIQNSKITALPENI 756

Query: 65   RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             NL  L +L + +NK++ LP + GEL  L  L    N I  +PD  G    L     +SN
Sbjct: 757  GNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSN 816

Query: 125  QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            Q+  LP + G+  NLS+   + N +T LPE   +   +  L ++ N+L  L +N I    
Sbjct: 817  QITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFI-DLA 875

Query: 185  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
             L  L    N L  +PE IG L  L +  L QN +  IP S++    L E  M NNA+  
Sbjct: 876  SLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKR 935

Query: 245  LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP  +G L KL  L+L+SN+L         L RLS+L +  N    L   + +MT L+++
Sbjct: 936  LPYCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEI 995

Query: 304  LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
              + N +  +   +      + LK LR                               L+
Sbjct: 996  GASFNSISAIYRDI------SKLKKLR------------------------------RLN 1019

Query: 364  LEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 422
            L   N+  +P  I E  + +  LDL RN I++   E++        I     + D     
Sbjct: 1020 LYKNNIKKLPCTIAELNDTLVLLDLRRNQIEDFGSEVTFGKFEIQAIFGDRAVFDTRSLH 1079

Query: 423  LTSLSSLSCL-KLDNNPLR 440
            +  LS      +LD+ P+R
Sbjct: 1080 IVPLSKREVYSRLDDEPIR 1098



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 232/500 (46%), Gaps = 38/500 (7%)

Query: 22   RDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN-VSHNKL 80
            RD+ N    N  E   G      V L+ L L HN I  + +++ NL  L  LN +    L
Sbjct: 583  RDIKNN---NVIECKSG-----LVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNL 634

Query: 81   SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
            + LP     L  LK LD+   +I ++P++ G   +L +    S +L++ P S     NL 
Sbjct: 635  TSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLK 694

Query: 141  DFKASNNCITSLPEDLADCSKMSKLDVEGNK-LTVLSNNLIASWTMLTELIASKNLLNGM 199
              +  N  + +L     +   +  L + GNK L  L  N   +   L +L+   + +  +
Sbjct: 695  RLEVRNTKVATL-FGFENLVNLEFLRLSGNKNLETLPENF-DNLINLKQLVIQNSKITAL 752

Query: 200  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
            PE IG+L  L  L +  N+I  +P S     SL E     N +  LP   GKL  L  L 
Sbjct: 753  PENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLR 812

Query: 260  LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L+SNQ+        +L  LS   ++ N L+ LP   G + +LR L L  N L +L  + +
Sbjct: 813  LNSNQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFI 872

Query: 319  NGPT--PALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +  +     L + R  ++PE         K  L+   T+ S+    L +       IP  
Sbjct: 873  DLASLEHLFLDFNRLKKIPE---------KIGLLKNLTKFSLAQNSLKI-------IPDS 916

Query: 376  IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 435
            + +  E+ +L+++ N+I+ LP  + +   L  L L+ NK+ + PD+ + +L  LS LK+ 
Sbjct: 917  VTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLNSNKLDNLPDS-MKNLERLSILKIH 975

Query: 436  NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 494
             N  R++ SD   ++  L+ +  S+N I+++  +   S L  L+ L L +  +++ P  I
Sbjct: 976  TNQFRRL-SDCVYEMTNLKEIGASFNSISAIYRD--ISKLKKLRRLNLYKNNIKKLPCTI 1032

Query: 495  LRLQQ-LRILDLSQNSLQSI 513
              L   L +LDL +N ++  
Sbjct: 1033 AELNDTLVLLDLRRNQIEDF 1052



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 244/548 (44%), Gaps = 87/548 (15%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L VL++S N+L++LP +I EL  LK L++  N +  +P+   S   L   + + N +K +
Sbjct: 45  LIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEFPPSIRTL---NLNKNLIKAI 101

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P S+    ++     +NN I  LP+ +A+ S +  L ++GN+L  L +  ++    L  L
Sbjct: 102 PKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPD--LSGLPDLRHL 159

Query: 190 IASKNLLNGMPE-------------TIG--------SLSRLIRLDLHQNRILSIPSSISG 228
             + N +  +P              +I         SLS L +LDL  N+I +IP+ I  
Sbjct: 160 DVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGN 219

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------------KEYCVEACQLR 276
             S+   Y+  N +  +P  +  L  L  L L SN++            K Y +   Q  
Sbjct: 220 LNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHF-QKN 278

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+VLDLSNN ++ +P  I ++  L+ L L  N +  LR S        +LK   ++   +
Sbjct: 279 LTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQLGH 338

Query: 337 EDSEASTTKEDLITMATRLSVTS--KELS---------LEGMNLSAIPSEIWEAGEITKL 385
             S+    K   I +A+   + S  +E+S         L G  + A+P  I    ++  L
Sbjct: 339 FPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNKIPALPKSIKHLAKLRIL 398

Query: 386 DLSRNSIQELPPELSSCASL-----QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
            L R      P  +S C        + +   RN+IK  PD I T L +L  L LD   + 
Sbjct: 399 GLGRFG----PENISDCEEYSRNESKKISDDRNRIKRLPDTI-TELQNLEILNLDGVEIE 453

Query: 441 QVPSD---------------GFKDIP--MLQILDLSY-------NIASLPENPPFSSLPH 476
            +P +                FK +P  + QI  L         N++SLP     S L +
Sbjct: 454 ILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLSSLPSG--LSILKN 511

Query: 477 LQELYLRR-MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           L+ L L +   L     ++  ++ LR+L +    L  +P  F+NLT+L  LDL+ N +S 
Sbjct: 512 LKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDLASNELSV 571

Query: 536 LPPELVSV 543
           LP  L +V
Sbjct: 572 LPDSLGNV 579



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 239/544 (43%), Gaps = 92/544 (16%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N I++L + +  L  L +LN+   ++  LP  IG L  +K L ++  +  ++P+ I   
Sbjct: 426 RNRIKRLPDTITELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQI 485

Query: 114 TALVKFDCSS-NQLKELPSSL-----------GRCL-------NLSDFKA------SNNC 148
            +L    C S   L  LPS L            +C        N+ D K+       N  
Sbjct: 486 ASLRILSCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIR 545

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLS 207
           +T LP    + + +  LD+  N+L+VL ++L         ++ S+++ N  + E    L 
Sbjct: 546 LTELPSSFENLTNLRVLDLASNELSVLPDSL-------GNVVYSRDIKNNNVIECKSGLV 598

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            L  L+L+ N I+SI  ++    SL     +G   L++LP     L+ L  LD+    ++
Sbjct: 599 SLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQ 658

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS--SLVNGPTP 323
           +   +  +L+ L  L + +  L   P     M  L++L +    + TL    +LVN    
Sbjct: 659 QLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLFGFENLVN---- 714

Query: 324 ALLKYLR-------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
             L++LR         LPEN D        +LI +        K+L ++   ++A+P  I
Sbjct: 715 --LEFLRLSGNKNLETLPENFD--------NLINL--------KQLVIQNSKITALPENI 756

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 436
                +  L +  N I  LP       SL  L+   NKI   PD+    L +LS L+L++
Sbjct: 757 GNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDS-FGKLKNLSVLRLNS 815

Query: 437 NPLRQVPS----------------------DGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           N +  +P                       + F ++  L++L L  N + SLP+N  F  
Sbjct: 816 NQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDN--FID 873

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  L+ L+L   +L++ P  I  L+ L    L+QNSL+ IP+    L  L EL++++N I
Sbjct: 874 LASLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAI 933

Query: 534 SALP 537
             LP
Sbjct: 934 KRLP 937



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 191/432 (44%), Gaps = 62/432 (14%)

Query: 39   DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
            D +    +L+KL +   NI++L ED   L  L  L +   KL + P +   +  LK L+V
Sbjct: 639  DTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEV 698

Query: 99   ---------------------------------SFNS-------------IMKIPDEIGS 112
                                             +F++             I  +P+ IG+
Sbjct: 699  RNTKVATLFGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGN 758

Query: 113  ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              +L      +N++  LP S G   +L +  A  N I  LP+       +S L +  N++
Sbjct: 759  LKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQI 818

Query: 173  TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
            T L +N     T L+E + + N+L  +PE+ G+L  L  L L  NR+ S+P +     SL
Sbjct: 819  TSLPDNF-GKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASL 877

Query: 233  AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
               ++  N L  +P ++G L  L    L  N LK       +L  L  L+++NN++  LP
Sbjct: 878  EHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLP 937

Query: 292  PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              +G +  L +L L  N L  L  S+ N    ++LK     +  N+    S    D +  
Sbjct: 938  YCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILK-----IHTNQFRRLS----DCVYE 988

Query: 352  ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLIL 410
             T L    KE+     ++SAI  +I +  ++ +L+L +N+I++LP  ++    +L  L L
Sbjct: 989  MTNL----KEIGASFNSISAIYRDISKLKKLRRLNLYKNNIKKLPCTIAELNDTLVLLDL 1044

Query: 411  SRNKIKDWPDAI 422
             RN+I+D+   +
Sbjct: 1045 RRNQIEDFGSEV 1056



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 250/613 (40%), Gaps = 103/613 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN  +  +P  +              E V+L+ L L  N I  L+   + +  L VL
Sbjct: 282 LDLSNNKITQIPKYI-------------TELVNLKVLNLRSNKIALLRGSFKKMKGLKVL 328

Query: 74  NVSHNK-LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +S N+ L   P+ I  L  LK L  SF  I  IP EI   T L     + N++  LP S
Sbjct: 329 KLSLNQQLGHFPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNKIPALPKS 388

Query: 133 LG-----RCLNLSDFKASN-------------------NCITSLPEDLADCSKMSKLDVE 168
           +      R L L  F   N                   N I  LP+ + +   +  L+++
Sbjct: 389 IKHLAKLRILGLGRFGPENISDCEEYSRNESKKISDDRNRIKRLPDTITELQNLEILNLD 448

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSIS 227
           G ++ +L  N I     + +LI +      +PE+I  ++ L  L     R LS +PS +S
Sbjct: 449 GVEIEILPEN-IGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLSSLPSGLS 507

Query: 228 -----------GCCSLAEFYMGNNA---------------LSALPAELGKLSKLGTLDLH 261
                       C SL    +G N                L+ LP+    L+ L  LDL 
Sbjct: 508 ILKNLKVLVLNKCYSL--LGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDLA 565

Query: 262 SNQL----------------KEYCVEACQ---LRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           SN+L                K   V  C+   + L  L+L +N +  +   +G + +L  
Sbjct: 566 SNELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEA 625

Query: 303 LLLTG-NPLRTLRSSLVNGPTPALLKYLRS---RLPEN-------EDSEASTTKEDLITM 351
           L L G   L +L  + VN      L    +   +LPE+       E  +  + K +    
Sbjct: 626 LNLIGWGNLTSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPE 685

Query: 352 ATRLSVTSKELSLEGMNLSAIPS-EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 410
           + +     K L +    ++ +   E     E  +L  ++N ++ LP    +  +L+ L++
Sbjct: 686 SCKNMANLKRLEVRNTKVATLFGFENLVNLEFLRLSGNKN-LETLPENFDNLINLKQLVI 744

Query: 411 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 470
             +KI   P+ I  +L SL+ L + NN + ++P    +   +++++     I  LP++  
Sbjct: 745 QNSKITALPENI-GNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDS-- 801

Query: 471 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 530
           F  L +L  L L   Q+   P +  +L  L    ++ N L  +PE F NL SL  L L  
Sbjct: 802 FGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKA 861

Query: 531 NNISALPPELVSV 543
           N + +LP   + +
Sbjct: 862 NRLESLPDNFIDL 874


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 180/402 (44%), Gaps = 64/402 (15%)

Query: 46  DLQKLILAHNNIEKL---KEDLRNLPLLTVLNVSH---------------------NKLS 81
           ++++L+L++NN+E L    E+L NL +L  LNV+                      N+L 
Sbjct: 70  EIKELVLSNNNLETLPPVMEELENLKVL-FLNVNRLKLLPDEIGKLVSLQELCLSCNELK 128

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            LPA + EL  L+ LD+  N   K P+ +G   +L + D S N+L+ LP+ +G  +NL D
Sbjct: 129 LLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQD 188

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N + +LP ++     + KL+++ N+   L   +I + T L EL    N L  +P+
Sbjct: 189 LDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLP-AVIGNLTNLQELDLDHNKLKTLPD 247

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           TIG L  L  L    N   S+P+ +    +L E    +N L  LP E+G+L  L  L L 
Sbjct: 248 TIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLS 307

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N LK        L+ L  L LS N L  LP  IG +  L+ L L  N L+TL  ++   
Sbjct: 308 GNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTI--- 364

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                LK LR                              +L L G  L  +P  I E  
Sbjct: 365 ---GELKNLR------------------------------KLYLGGSKLEILPVAIGELE 391

Query: 381 EITKLDLSRNSIQELPPELSS-CASLQTLILSRNKIKDWPDA 421
            + KL LS N ++ LP E+     SL+ L L  N I +  D 
Sbjct: 392 NLQKLHLSGNKLETLPIEIEKLSGSLRLLNLRGNNISEVGDG 433



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 191/444 (43%), Gaps = 88/444 (19%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S+N L  LP  + EL  LK L ++ N +  +PDEIG   +L +   S N+LK LP+ + 
Sbjct: 76  LSNNNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLLPAKM- 134

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
                                  +   + KLD+  N+     N ++     L EL  S N
Sbjct: 135 ----------------------VELKSLQKLDLWKNRFEKFPN-VVGELKSLQELDLSGN 171

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG+L  L  LDLH+N + ++P+ I    SL +  + NN   +LPA +G L+ 
Sbjct: 172 KLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTN 231

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  N+LK       +L+ L +L   +N    LP ++ ++  LR+L    N L+ L
Sbjct: 232 LQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLL 291

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L++                            ++L L G NL  +P
Sbjct: 292 ---------PVEIGELKN---------------------------LQKLYLSGNNLKTLP 315

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 433
             I    ++ +L LS N ++ LP  + +  +LQ L L  NK+K  PD I   L +L  L 
Sbjct: 316 DTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTI-GELKNLRKLY 374

Query: 434 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           L  + L  +P                              L +LQ+L+L   +L   P +
Sbjct: 375 LGGSKLEILPV-------------------------AIGELENLQKLHLSGNKLETLPIE 409

Query: 494 ILRLQ-QLRILDLSQNSLQSIPEG 516
           I +L   LR+L+L  N++  + +G
Sbjct: 410 IEKLSGSLRLLNLRGNNISEVGDG 433



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 23/292 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQ+L L+ N ++ L   +  L  L  L++  N+  + P  +GEL  L+ LD+S N + 
Sbjct: 115 VSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLE 174

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG+   L   D   N LK LP+ + +  +L      NN   SLP  + + + + +
Sbjct: 175 SLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQE 234

Query: 165 LDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPET 202
           LD++ NKL  L + +                      +     L EL    N L  +P  
Sbjct: 235 LDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVE 294

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +L L  N + ++P +I G   L E  +  N L +LPA +G L  L  L+L  
Sbjct: 295 IGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDH 354

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N+LK       +L+ L  L L  + L  LP  IG++  L+KL L+GN L TL
Sbjct: 355 NKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETL 406



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 173/387 (44%), Gaps = 67/387 (17%)

Query: 181 ASWTMLTELIAS-KNLLNGM-PETIGSLSRLIR----LDLHQNRILSIPSSISGCCS--L 232
           A W++L  + A+ ++  NG  P+ IGS  R  R    + +H   I  I S I G     +
Sbjct: 12  AIWSLLVLMGATLQSSDNGANPDGIGSFERHSRNERKISIHSKDIEYIDSYIRGSVKSEI 71

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 292
            E  + NN L  LP  + +L  L  L L+ N+LK                       LP 
Sbjct: 72  KELVLSNNNLETLPPVMEELENLKVLFLNVNRLKL----------------------LPD 109

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EIGK+ +L++L L+ N L+ L + +V   +   L   ++R             E    + 
Sbjct: 110 EIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRF------------EKFPNVV 157

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
             L  + +EL L G  L ++P+ I     +  LDL  NS++ LP E+    SLQ L L  
Sbjct: 158 GELK-SLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQN 216

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP-- 469
           N+ +  P A++ +L++L  L LD+N L+ +P D   ++  L+IL   +N   SLP     
Sbjct: 217 NRFESLP-AVIGNLTNLQELDLDHNKLKTLP-DTIGELKDLRILSFIHNEFESLPTKVIE 274

Query: 470 -------------------PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 510
                                  L +LQ+LYL    L+  P  I  L+ LR L LS N L
Sbjct: 275 LRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNEL 334

Query: 511 QSIPEGFKNLTSLTELDLSDNNISALP 537
           +S+P    NL +L  L+L  N +  LP
Sbjct: 335 ESLPAVIGNLVNLQYLNLDHNKLKTLP 361



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 44/287 (15%)

Query: 258 LDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           + +HS  ++    Y   + +  +  L LSNN+L  LPP + ++  L+ L L  N L+ L 
Sbjct: 49  ISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKLL- 107

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  +  L                           V+ +EL L    L  +P+
Sbjct: 108 --------PDEIGKL---------------------------VSLQELCLSCNELKLLPA 132

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           ++ E   + KLDL +N  ++ P  +    SLQ L LS NK++  P A++ +L +L  L L
Sbjct: 133 KMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLP-AVIGNLINLQDLDL 191

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
             N L+ +P++  + +  LQ L+L  N   SLP      +L +LQEL L   +L+  P  
Sbjct: 192 HENSLKTLPTE-IEKLKSLQKLNLQNNRFESLP--AVIGNLTNLQELDLDHNKLKTLPDT 248

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L+ LRIL    N  +S+P     L +L EL+  DN +  LP E+
Sbjct: 249 IGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEI 295



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 1/170 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  DL+ L   HN  E L   +  L  L  LN   NKL  LP  IGEL  L+ L +S N+
Sbjct: 251 ELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNN 310

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD IG    L +   S N+L+ LP+ +G  +NL      +N + +LP+ + +   +
Sbjct: 311 LKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELKNL 370

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
            KL + G+KL +L    I     L +L  S N L  +P  I  LS  +RL
Sbjct: 371 RKLYLGGSKLEILP-VAIGELENLQKLHLSGNKLETLPIEIEKLSGSLRL 419



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 5/176 (2%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L  +P EI +   + +L LS N ++ LP ++    SLQ L L +N+ + +P+ ++  L S
Sbjct: 104 LKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPN-VVGELKS 162

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L  L L  N L  +P+    ++  LQ LDL  N + +LP       L  LQ+L L+  + 
Sbjct: 163 LQELDLSGNKLESLPA-VIGNLINLQDLDLHENSLKTLP--TEIEKLKSLQKLNLQNNRF 219

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
              P  I  L  L+ LDL  N L+++P+    L  L  L    N   +LP +++ +
Sbjct: 220 ESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIEL 275


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 189/427 (44%), Gaps = 73/427 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L            P L + + S                  
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL------------PELPREIGS------------------ 348

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 409
                ++V    +SL    L  +P EI +   +  L+LS N ++ LP   +    L  L 
Sbjct: 349 --CKNVTV----MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 410 LSRNKIK 416
           LS N+ K
Sbjct: 403 LSDNQSK 409



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 165

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 166 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P + 
Sbjct: 242 MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NT 299

Query: 447 FKDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRR 484
             ++ +L+  D S N + SLP    +           + LP L            + LR 
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRS 359

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 360 NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 74

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 75  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 163 GRLVKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMD 220

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 221 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 250



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 144/347 (41%), Gaps = 64/347 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASL-- 96

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
                               + L  LD+S N +   P  I     L  +  + NP+    
Sbjct: 97  --------------------VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI---- 132

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                           S+LP            D  T    L+    +L L    L  +P+
Sbjct: 133 ----------------SKLP------------DGFTQLLNLT----QLYLNDAFLEFLPA 160

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
                 ++  L+L  N ++ LP  +   A L+ L L  N+  + P+ +L  + +L  L +
Sbjct: 161 NFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE-VLDQIQNLRELWM 219

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           DNN L+ +P    K + ML  LD+S N I ++  +   S    L++L L    L++ P  
Sbjct: 220 DNNALQVLPGSIGK-LKMLVYLDMSKNRIETVDMD--ISGCEALEDLLLSSNMLQQLPDS 276

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           I  L++L  L +  N L  +P    NL+ L E D S N + +LPP +
Sbjct: 277 IGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTI 323


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 193/431 (44%), Gaps = 70/431 (16%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   +++  + SL  VP+E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVETIDRRHCSLVYVPDEIYR------------YARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------ 179
           L  LP S     NL+    ++  + SLPE++ +   ++ L++  N LT L ++L      
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 176

Query: 180 ----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                           I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P
Sbjct: 177 EELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 236

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ISG  SL +  +  N L  +P  +GKL K                      LS+L + 
Sbjct: 237 EEISGLTSLTDLVISQNLLEMIPDGIGKLKK----------------------LSILKVD 274

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP  IG   +L +L+LT N L TL  S+  G    L  +       N D    T
Sbjct: 275 QNRLTQLPEAIGDCDSLTELVLTENRLVTLPKSI--GKLKKLSNF-------NADRNKLT 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           +    I   + L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L++  
Sbjct: 326 SLPKEIGGCSSLTV----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPFSLTA-L 380

Query: 404 SLQTLILSRNK 414
            L+ L LS N+
Sbjct: 381 KLKALWLSDNQ 391



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 156/360 (43%), Gaps = 19/360 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L  +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALFHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LK+D N L Q+P +   D   L  L L+ N + +LP++     L  L      
Sbjct: 264 KLKKLSILKVDQNRLTQLP-EAIGDCDSLTELVLTENRLVTLPKS--IGKLKKLSNFNAD 320

Query: 484 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           R +L   P +I     L +  +  N L  IP      T L  LD++ N +  LP  L ++
Sbjct: 321 RNKLTSLPKEIGGCSSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPFSLTAL 380



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           PD I     SL  L LD N LR++P   F+ +  L+ L LS N I  LP  P  ++   L
Sbjct: 28  PDEIYRYARSLEELLLDANQLRELPEQFFQ-LVKLRKLGLSDNEIQRLP--PEIANFMQL 84

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            EL + R  + E P  I   + L+I D S N L  +PE F  L +LT L ++D ++ +LP
Sbjct: 85  VELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLP 144



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


>gi|432885659|ref|XP_004074704.1| PREDICTED: protein LAP2-like [Oryzias latipes]
          Length = 1250

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 187/428 (43%), Gaps = 73/428 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+ S+ SL  VP E++ +F++            LQ+L L  N IE+L + L N  LL  
Sbjct: 25  SLDYSHCSLETVPKEIF-SFEKT-----------LQELYLDANQIEELPKQLFNCQLLNR 72

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE---- 128
           L+V  N L+ LPAAI  L  L+ LDVS N I + PD I +   L   + S N++ +    
Sbjct: 73  LSVPDNDLAVLPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEG 132

Query: 129 -------------------LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                              LP+S GR   L   +   N + +LP+ +   +++ +LD+  
Sbjct: 133 FTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGS 192

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+ T +   ++   + + EL    N L  +P  +G L  L  LD+ +N +  +   ISGC
Sbjct: 193 NEFTEVP-EVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISGC 251

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L +  + NNAL+ LPA +G L KL  L +  NQL         L  +  LD S N + 
Sbjct: 252 ENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMFLPDSVGGLTAIDELDCSFNEIE 311

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  IG+   +R      N L  L   + N                             
Sbjct: 312 ALPSSIGQWVAIRTFAADHNFLTELPPEMGNW---------------------------- 343

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
                 L+V    L L    L ++P E+ +  ++  ++LS N ++ LP   +  + +  +
Sbjct: 344 ----KNLTV----LFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLSEMTAM 395

Query: 409 ILSRNKIK 416
            LS N+ K
Sbjct: 396 WLSENQSK 403



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 207/473 (43%), Gaps = 105/473 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++ SLD S  S+  +P EI S      F+ +                L +     N
Sbjct: 18  GEEEVVTSLDYSHCSLETVPKEIFS------FEKT----------------LQELYLDAN 55

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  +++L V  N L VL    IA+   L EL  SKN +   P++I +  
Sbjct: 56  QIEELPKQLFNCQLLNRLSVPDNDLAVLPA-AIANLINLRELDVSKNGIQEFPDSIKNCK 114

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   NR+  +P   +   +L + Y+ +  L  LPA  G+L+KL  L+L  NQL+ 
Sbjct: 115 GLTIVEASVNRMPKLPEGFTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQ- 173

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                                 LP  + K+T L +L L  N    +         P +L+
Sbjct: 174 ---------------------NLPKSMQKLTQLERLDLGSNEFTEV---------PEVLE 203

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           +L                              KEL ++G  L+ +P+ + +   +  LD+
Sbjct: 204 HLSG---------------------------IKELWMDGNKLTVLPAMVGKLKNLEYLDM 236

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N+++ +  ++S C +LQ L+LS N +   P A + SL  L+ LK+D N L  +P D  
Sbjct: 237 SKNNLEMVDEQISGCENLQDLLLSNNALTQLP-ASIGSLKKLTALKVDENQLMFLP-DSV 294

Query: 448 KDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRRM 485
             +  +  LD S+N I +LP +                     P   +  +L  L+L   
Sbjct: 295 GGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEMGNWKNLTVLFLHSN 354

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +L   P ++  +Q+L++++LS N L+++P  F  L+ +T + LS+N    L P
Sbjct: 355 KLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLSEMTAMWLSENQSKPLIP 407



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 63/299 (21%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL++L L  N +  L   L N        
Sbjct: 15  CLRGEEEVVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFN-------- 66

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                  +  RLSV   +L++       +P+ I     + +LD+
Sbjct: 67  ---------------------CQLLNRLSVPDNDLAV-------LPAAIANLINLRELDV 98

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPD----------------------AILTS 425
           S+N IQE P  + +C  L  +  S N++   P+                      A    
Sbjct: 99  SKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEGFTLLLNLTQLYLNDGYLEFLPASFGR 158

Query: 426 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 484
           L+ L  L+L  N L+ +P    + +  L+ LDL  N    +PE      L  ++EL++  
Sbjct: 159 LAKLQILELRENQLQNLPK-SMQKLTQLERLDLGSNEFTEVPEV--LEHLSGIKELWMDG 215

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
            +L   P  + +L+ L  LD+S+N+L+ + E      +L +L LS+N ++ LP  + S+
Sbjct: 216 NKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISGCENLQDLLLSNNALTQLPASIGSL 274


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            +  +PS I +   +       N +Q+LPPE+ S  ++  L L  NK++  P+  +  + 
Sbjct: 310 EVEVLPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N L+ +P
Sbjct: 369 KLKVINLSDNRLKNLP 384



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 198/452 (43%), Gaps = 88/452 (19%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++   L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDANRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              +  ++ LD S+N +  LP +     L +L+        L++ P +I   + + +L L
Sbjct: 295 IGGLISVEELDCSFNEVEVLPSS--IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFL 352

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
             N L+++PE   ++  L  ++LSDN +  LP
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 1/220 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I  +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMV 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +LD
Sbjct: 246 EEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELD 305

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N++ VL ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P  +
Sbjct: 306 CSFNEVEVLPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
                L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TFIP 223


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 174/372 (46%), Gaps = 18/372 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N I +L      L  L  L +S N+++ LP  IG    L+ LD+S N I  I
Sbjct: 39  LEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMSLQELDISRNDITDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I     L   D S N L  LP    +  NL+    ++  +  LP D+   S +  L+
Sbjct: 99  PENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSLSNLESLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  L ++L +    L  L    N+L  +PETIGSL  L  L L  N +  +P  I
Sbjct: 159 LRENLLKYLPSSL-SFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSELPPEI 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSN 284
                L +  +  N L  LP E+  L  L  L L  N + EY  E      +LS+L +  
Sbjct: 218 GNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSI-EYLPEGIGNLRKLSILKMDQ 276

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  L P IG    +++L+LT N L  + +S+      A     R+RL E         
Sbjct: 277 NQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTE-------IP 329

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I   ++L V    LSL    +  +PSEI    E+  LD+S N +Q LP  + SC +
Sbjct: 330 KE--IGQCSKLGV----LSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLPITMGSC-N 382

Query: 405 LQTLILSRNKIK 416
           L+ L LS N+ +
Sbjct: 383 LKALWLSENQAQ 394



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N ++ L   L  L  L  L++  N L +LP  IG L  L+ L +  N + +
Sbjct: 153 NLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSE 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L + D S N+L+ LP  +   L+L+D   S N I  LPE + +  K+S L
Sbjct: 213 LPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLSIL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+L  L+   I +   + ELI ++NLL+ +P +IG +  L   ++ +NR+  IP  
Sbjct: 273 KMDQNQLLHLT-PAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKE 331

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I  C  L    + +N +  LP+E+G L +L  LD+  N+L+   +      L  L LS N
Sbjct: 332 IGQCSKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLPITMGSCNLKALWLSEN 391

Query: 286 S 286
            
Sbjct: 392 Q 392



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 182/383 (47%), Gaps = 22/383 (5%)

Query: 159 CSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           C++ +  +D     LT +  +++     L EL+   N +  +P     L++L +L L  N
Sbjct: 11  CNRHVDYIDKRHCNLTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDN 70

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
            I  +P  I    SL E  +  N ++ +P  +     L   D   N L        QLR 
Sbjct: 71  EIARLPPDIGNFMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRN 130

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ L L++ SL+ LPP+IG ++ L  L L  N L+ L SSL      + L  L++     
Sbjct: 131 LTHLGLNDVSLARLPPDIGSLSNLESLELRENLLKYLPSSL------SFLVKLKTL---- 180

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                S   EDL      L  + +EL L+   LS +P EI     +T++D+S N ++ LP
Sbjct: 181 --DLGSNVLEDLPETIGSLP-SLEELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLP 237

Query: 397 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV-PSDGFKDIPMLQI 455
            E+S    L  LILS+N I+  P+ I  +L  LS LK+D N L  + P+ G  +   +Q 
Sbjct: 238 DEMSGLLHLTDLILSQNSIEYLPEGI-GNLRKLSILKMDQNQLLHLTPAIG--NCIAMQE 294

Query: 456 LDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 514
           L L+ N+ S +P +     +  L    + R +L E P +I +  +L +L L  N +  +P
Sbjct: 295 LILTENLLSDVPTS--IGRMKLLANFNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLP 352

Query: 515 EGFKNLTSLTELDLSDNNISALP 537
               NL  L  LD+S N +  LP
Sbjct: 353 SEIGNLKELHVLDVSGNRLQHLP 375



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 413
           R   T +EL L+   +  +P   +   ++ KL LS N I  LPP++ +  SLQ L +SRN
Sbjct: 34  RYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMSLQELDISRN 93

Query: 414 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 472
            I D P+ I     +L       NPL ++P DGF  +  L  L L+  ++A LP  P   
Sbjct: 94  DITDIPENI-KFCRNLQVADFSCNPLSRLP-DGFTQLRNLTHLGLNDVSLARLP--PDIG 149

Query: 473 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           SL +L+ L LR   L+  P+ +  L +L+ LDL  N L+ +PE   +L SL EL L  N 
Sbjct: 150 SLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNE 209

Query: 533 ISALPPEL 540
           +S LPPE+
Sbjct: 210 LSELPPEI 217



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 419 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 477
           P+ IL  + +L  L LD N +R++P  GF  +  L+ L LS N IA LP  P   +   L
Sbjct: 29  PEDILRYVRTLEELLLDANQIRELPR-GFFRLAQLRKLTLSDNEIARLP--PDIGNFMSL 85

Query: 478 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           QEL + R  + + P +I   + L++ D S N L  +P+GF  L +LT L L+D +++ LP
Sbjct: 86  QELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLP 145

Query: 538 PELVSV 543
           P++ S+
Sbjct: 146 PDIGSL 151


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 192/436 (44%), Gaps = 76/436 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  SL+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTSLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  L
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+N++  LP  IG +  L  L +  
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCE-SLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+  G   A+           ED + S  +                      
Sbjct: 286 NQLMYLPDSI--GGLTAI-----------EDLDCSFNE---------------------- 310

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            + A+PS I    +I       N + +LPPE+ +  S   L L  NK++  P+  +  + 
Sbjct: 311 -IEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEE-MGDMQ 368

Query: 428 SLSCLKLDNNPLRQVP 443
            L  + L +N LR +P
Sbjct: 369 KLKVINLSDNRLRNLP 384



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 198/455 (43%), Gaps = 94/455 (20%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + SLD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTILPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  +    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNKLTYIPGFLGNLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ---LREAPTDILRLQQLRI 502
              +  ++ LD S+N I +LP     SS+ HL ++         L + P +I   +   +
Sbjct: 295 IGGLTAIEDLDCSFNEIEALP-----SSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATV 349

Query: 503 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           L L  N L+S+PE   ++  L  ++LSDN +  LP
Sbjct: 350 LFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLP 384



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 24/194 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE +++ +     L  L +S N + +LP +IG L  L +L V  N +M +
Sbjct: 232 LTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG  TA+   DCS N+++ LPSS+G  + +  F A +N +T LP +           
Sbjct: 292 PDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W   T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 227 SGCCSLAEFYMGNN 240
           +    L   ++ +N
Sbjct: 388 TRLQQLTAMWLSDN 401



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 24/244 (9%)

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 417 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 473
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPAN--FGR 159

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKL 219

Query: 534 SALP 537
           + +P
Sbjct: 220 TYIP 223


>gi|392338593|ref|XP_003753576.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
 gi|392345308|ref|XP_003749226.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
          Length = 1430

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 185/409 (45%), Gaps = 50/409 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN-NLIASWTMLTE 188
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L    ++   + L E
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLRE 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                N L  +P  IGSL +L  LD+ +N I  +   IS C +L +F + +N+L  LP  
Sbjct: 191 FWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPET 250

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G L  + TL +  NQL         LR +  LD S N +  LP  IG++T +R      
Sbjct: 251 IGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 310

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N                   YL+   PE             I     ++V    L L   
Sbjct: 311 N-------------------YLQQLPPE-------------IGNWKNVTV----LFLHSN 334

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 416
            L  +P E+ +  ++  ++LS N ++ LP   +    L  + LS N+ K
Sbjct: 335 KLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 383



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 184/383 (48%), Gaps = 49/383 (12%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--- 359
           L L                  A L++L +        +    +E+ + M  +  V     
Sbjct: 143 LYLND----------------AFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLS 186

Query: 360 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 417
             +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S+C +LQ  +LS N ++ 
Sbjct: 187 GLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQ 246

Query: 418 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN-------- 468
            P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+N I +LP +        
Sbjct: 247 LPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSFNEIEALPSSIGQLTNIR 304

Query: 469 -------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 515
                        P   +  ++  L+L   +L   P ++  +Q+L++++LS N L+++P 
Sbjct: 305 TFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPF 364

Query: 516 GFKNLTSLTELDLSDNNISALPP 538
            F  L  LT + LSDN    L P
Sbjct: 365 SFTKLQQLTAMWLSDNQSKPLIP 387



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 40/271 (14%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  LQIL+L  N +  LP+      L  L+E ++   +L   P  I  L+QL  LD+S
Sbjct: 158 GRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVS 217

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +N+++ + EG     +L +  LS N++  LP
Sbjct: 218 KNNIEMVEEGISTCENLQDFLLSSNSLQQLP 248


>gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa Japonica Group]
 gi|125562149|gb|EAZ07597.1| hypothetical protein OsI_29848 [Oryza sativa Indica Group]
          Length = 576

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    ++LQ  ++A   IE L + +  L  L  L++S N+L  LP AIG+L  L  LD+ 
Sbjct: 247 KGARDLNLQGKLMAQ--IEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIH 304

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I ++P+ IG   +L+  +   NQL  LPSS+GR LNL +    +N ++SLP+ +   
Sbjct: 305 ANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSL 364

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +++ KL VE N L  L    I     L EL A  N L  +PE +G L  L  L +  N +
Sbjct: 365 TRLKKLIVETNDLDELPYT-IGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNL 423

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQL 275
            S+P++++    L E  +  N L ++P      + L  L++ +N    Q     +   ++
Sbjct: 424 RSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNLEM 483

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  LD+SNN +  LP   G +  LR L    NPL+     +      A+++Y+      
Sbjct: 484 -LEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYM------ 536

Query: 336 NEDSEASTTKED 347
             D+   TTK +
Sbjct: 537 -SDASKRTTKSE 547



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 84/344 (24%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P++IG L+ L+ LD+ +NR+L                       ALP  +GKL  L  L
Sbjct: 265 LPDSIGKLTGLVTLDISENRLL-----------------------ALPDAIGKLFSLAKL 301

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           D+H+                      N +S LP  IG + +L  L + GN L +L SS+ 
Sbjct: 302 DIHA----------------------NRISQLPESIGDLRSLIYLNMRGNQLSSLPSSI- 338

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                        RL                       +  +EL +    LS++P  I  
Sbjct: 339 ------------GRL-----------------------LNLEELDVGSNGLSSLPDSIGS 363

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + KL +  N + ELP  +  C SL  L    N +K  P+A+   L  L  L +  N 
Sbjct: 364 LTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAV-GKLEPLEILSVRYNN 422

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           LR +P+     +  L+ +D+S+N + S+PEN  F++      +      L+  P  I  L
Sbjct: 423 LRSLPTT-MASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNL 481

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           + L  LD+S N ++ +P+ F NL  L  L   +N +   P ++ 
Sbjct: 482 EMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIA 525



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 16/237 (6%)

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK----ELSLEGMNLS 370
           S L  GP  A    +R+     +D+E    K  LI +A+ + V++K    +L+L+G  ++
Sbjct: 205 SHLPRGPVEANSVAVRADGNYGDDNE----KLSLIKLASMIEVSAKKGARDLNLQGKLMA 260

Query: 371 AI---PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            I   P  I +   +  LD+S N +  LP  +    SL  L +  N+I   P++I   L 
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESI-GDLR 319

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           SL  L +  N L  +PS     +  L+ LD+  N ++SLP++    SL  L++L +    
Sbjct: 320 SLIYLNMRGNQLSSLPSS-IGRLLNLEELDVGSNGLSSLPDS--IGSLTRLKKLIVETND 376

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L E P  I     L  L    N L+++PE    L  L  L +  NN+ +LP  + S+
Sbjct: 377 LDELPYTIGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASL 433


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 165/339 (48%), Gaps = 42/339 (12%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG+   L +L L  NR+ +IP  I    +L    +  N L  +P E+ +L  L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           GTLDL+ N+LK    E  +L  L  L+LS N L+ LPP IG++  L  L L  N L TL 
Sbjct: 89  GTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLP 148

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +V   +  +L      L ENE                               + ++P 
Sbjct: 149 EEIVGLKSLQILN-----LFENE-------------------------------IKSLPK 172

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 434
           EI +   +  LDL +N I+ L  +     +L++L L  NK++++P A +  L SL  L L
Sbjct: 173 EISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP-ADIVQLKSLEFLNL 231

Query: 435 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 493
           + N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L+L   +L   P  
Sbjct: 232 NYNRFKILPEEILQ-LENLQVLELTGNQLTSLPEG--IGRLEKLESLFLEGNRLTTLPKG 288

Query: 494 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
           I  L+ L+IL L QN L +IPE   +L +L EL L D N
Sbjct: 289 IGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 163/359 (45%), Gaps = 41/359 (11%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           H+N+EK    L+N   + +L+VS  +L  LP  IG    L+ L +  N +  IP EIG  
Sbjct: 6   HSNLEK---SLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKL 62

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     + N LK +P+ + +  NL       N + +LP ++     + +L++ GN+LT
Sbjct: 63  RNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLT 122

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           VL  + I     L  L   +N L  +PE I  L  L  L+L +N I S+P  IS   +L 
Sbjct: 123 VLPPS-IGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLI 181

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              +G N +  L  +  +L  L +L+L  N+L+ +  +  QL+ L  L+L+ N    LP 
Sbjct: 182 WLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPE 241

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  L+ L LTGN L +L   +              RL + E               
Sbjct: 242 EILQLENLQVLELTGNQLTSLPEGI-------------GRLEKLES-------------- 274

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
                    L LEG  L+ +P  I     +  L L +N +  +P E+ S  +L+ L L 
Sbjct: 275 ---------LFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQ 324



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 143/291 (49%), Gaps = 22/291 (7%)

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSS 316
           +HSN L++      ++R  +LD+S+  L  LP EIG    L KL+L GN L  +      
Sbjct: 5   IHSN-LEKSLQNPSEVR--ILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGK 61

Query: 317 LVNGPTPALLKYLRSRLPENEDSEAST------TKEDLITMATRLSVTS--KELSLEGMN 368
           L N  T  L + +   +P NE  +          + +L  +   +      KEL+L G  
Sbjct: 62  LRNLETLILAENILKTIP-NEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQ 120

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P  I +   +  L+L RN +  LP E+    SLQ L L  N+IK  P  I + LS+
Sbjct: 121 LTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI-SQLSN 179

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQ 486
           L  L L  N ++++  D FK +  L+ L+L  N     EN P     L  L+ L L   +
Sbjct: 180 LIWLDLGKNKIKRLSLD-FKRLQNLKSLNLLDNKL---ENFPADIVQLKSLEFLNLNYNR 235

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
            +  P +IL+L+ L++L+L+ N L S+PEG   L  L  L L  N ++ LP
Sbjct: 236 FKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP 286



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 14/250 (5%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G+L+L    L+ +PNE+ K               +L++L L+ N +  L   +  L  L 
Sbjct: 89  GTLDLYENELKALPNEIGK-------------LENLKELNLSGNQLTVLPPSIGQLQNLE 135

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L +  N+L+ LP  I  L  L+ L++  N I  +P EI   + L+  D   N++K L  
Sbjct: 136 ILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSL 195

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              R  NL      +N + + P D+     +  L++  N+  +L    I     L  L  
Sbjct: 196 DFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEE-ILQLENLQVLEL 254

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +PE IG L +L  L L  NR+ ++P  I     L    +  N L+A+P E+G 
Sbjct: 255 TGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGS 314

Query: 252 LSKLGTLDLH 261
           L  L  L L 
Sbjct: 315 LQNLKELYLQ 324



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LD+S   ++ LP E+ +  +L+ LIL  N++   P  I   L +L  L L  N L+
Sbjct: 18  EVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEI-GKLRNLETLILAENILK 76

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P++  + +  L  LDL  N + +LP       L +L+EL L   QL   P  I +LQ 
Sbjct: 77  TIPNE-IEQLQNLGTLDLYENELKALPNE--IGKLENLKELNLSGNQLTVLPPSIGQLQN 133

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L IL+L +N L ++PE    L SL  L+L +N I +LP E+
Sbjct: 134 LEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174


>gi|125603982|gb|EAZ43307.1| hypothetical protein OsJ_27903 [Oryza sativa Japonica Group]
          Length = 576

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    ++LQ  ++A   IE L + +  L  L  L++S N+L  LP AIG+L  L  LD+ 
Sbjct: 247 KGARDLNLQGKLMAQ--IEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIH 304

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I ++P+ IG   +L+  +   NQL  LPSS+GR LNL +    +N ++SLP+ +   
Sbjct: 305 ANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSL 364

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +++ KL VE N L  L    I     L EL A  N L  +PE +G L  L  L +  N +
Sbjct: 365 TRLKKLIVETNDLDELPYT-IGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNL 423

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQL 275
            S+P++++    L E  +  N L ++P      + L  L++ +N    Q     +   ++
Sbjct: 424 RSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNLEM 483

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  LD+SNN +  LP   G +  LR L    NPL+     +      A+++Y+      
Sbjct: 484 -LEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYM------ 536

Query: 336 NEDSEASTTKED 347
             D+   TTK +
Sbjct: 537 -SDASKRTTKSE 547



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 84/344 (24%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P++IG L+ L+ LD+ +NR+L                       ALP  +GKL  L  L
Sbjct: 265 LPDSIGKLTGLVTLDISENRLL-----------------------ALPDAIGKLFSLAKL 301

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           D+H+                      N +S LP  IG + +L  L + GN L +L SS+ 
Sbjct: 302 DIHA----------------------NRISQLPESIGDLRSLIYLNMRGNQLSSLPSSI- 338

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                        RL                       +  +EL +    LS++P  I  
Sbjct: 339 ------------GRL-----------------------LNLEELDVGSNGLSSLPDSIGS 363

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 438
              + KL +  N + ELP  +  C SL  L    N +K  P+A+   L  L  L +  N 
Sbjct: 364 LTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAV-GKLEPLEILSVRYNN 422

Query: 439 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 497
           LR +P+     +  L+ +D+S+N + S+PEN  F++      +      L+  P  I  L
Sbjct: 423 LRSLPTT-MASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNL 481

Query: 498 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           + L  LD+S N ++ +P+ F NL  L  L   +N +   P ++ 
Sbjct: 482 EMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIA 525



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 16/237 (6%)

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK----ELSLEGMNLS 370
           S L  GP  A    +R+     +D+E    K  LI +A+ + V++K    +L+L+G  ++
Sbjct: 205 SHLPRGPVEANSVAVRADGNYGDDNE----KLSLIKLASMIEVSAKKGARDLNLQGKLMA 260

Query: 371 AI---PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            I   P  I +   +  LD+S N +  LP  +    SL  L +  N+I   P++I   L 
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESI-GDLR 319

Query: 428 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 486
           SL  L +  N L  +PS     +  L+ LD+  N ++SLP++    SL  L++L +    
Sbjct: 320 SLIYLNMRGNQLSSLPSS-IGRLLNLEELDVGSNGLSSLPDS--IGSLTRLKKLIVETND 376

Query: 487 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           L E P  I     L  L    N L+++PE    L  L  L +  NN+ +LP  + S+
Sbjct: 377 LDELPYTIGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASL 433


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 195/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+               L   E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYLPDSI-------------GGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     IT L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 204/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 ISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S+N + +LP +                     P   S  ++  L+L  
Sbjct: 295 IGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+A+P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTALPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269


>gi|260836016|ref|XP_002613003.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
 gi|229298385|gb|EEN69012.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
          Length = 299

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 43/336 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT+L++  NK+ ELP  IG+L  L +LDVS N +  +P EIG+   +   D   N+L +L
Sbjct: 2   LTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDL 61

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++G    LS      N + S+P+ L++C++M + + EGN L+ L   L++S   ++ L
Sbjct: 62  PETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSL 121

Query: 190 IASKNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
             ++N  +  P  IG     + +  +++  N I  IP  I S    L +  M +N L++L
Sbjct: 122 TLARNNFSSYP--IGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSL 179

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++G    +  L+L +NQL++   +   L  L  L LSNN L  LP  IG +  LR L 
Sbjct: 180 PLDVGTWENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLD 239

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L +L         P  + YLR                DL     RL V S +   
Sbjct: 240 LEENRLESL---------PTEIAYLR----------------DL----NRLVVQSNQ--- 267

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
               L+ +P  I     +T L +  N++Q++P E+ 
Sbjct: 268 ----LTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 3/274 (1%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L  L ++HN++E L  ++ N   ++ L++ HN+L +LP  IG L +L  L + +N 
Sbjct: 21  QLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDLPETIGNLKLLSRLGLRYNR 80

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSS-LGRCLNLSDFKASNNCITSLP-EDLADCS 160
           +  +P  + + T + +F+   N L  LP   L   +N+S    + N  +S P    A  +
Sbjct: 81  LASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFSSYPIGGPAQFA 140

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  +++E N +  +   + +    LT+L    N L  +P  +G+   ++ L+L  N++ 
Sbjct: 141 TVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQ 200

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +P  I    +L    + NN L  LP  +G L  L  LDL  N+L+    E   LR L+ 
Sbjct: 201 KLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNR 260

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L + +N L+ +P  IG +T L  L +  N L+ +
Sbjct: 261 LVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQI 294



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 47/339 (13%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  L L +N+I  +P  I    +L    + +N L  LPAE+G   ++ +LDL  N+L +
Sbjct: 1   KLTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLD 60

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPT 322
                  L+ LS L L  N L+ +P  +   T + +    GN L +    L SSLVN  +
Sbjct: 61  LPETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSS 120

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGE 381
             L +   S  P    ++ +T                  +++E  +++ IP  I+  A  
Sbjct: 121 LTLARNNFSSYPIGGPAQFATV---------------YSINMEHNHINKIPFGIFSRAKY 165

Query: 382 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 441
           +TKL++  N +  LP ++ +  ++  L L  N+++  P+ I   L++L  L L NN L++
Sbjct: 166 LTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQKLPEDI-QHLTNLETLILSNNLLKK 224

Query: 442 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 501
           +P  G  ++ ML++LDL  N                        +L   PT+I  L+ L 
Sbjct: 225 LPR-GIGNLRMLRVLDLEEN------------------------RLESLPTEIAYLRDLN 259

Query: 502 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            L +  N L ++P    +LT+LT L + +NN+  +P E+
Sbjct: 260 RLVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEI 298



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 13/154 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +V            W   V+L    L  N ++KL ED
Sbjct: 159 IFSRAKYLTKLNMKDNQLTSLPLDV----------GTWENMVELN---LGTNQLQKLPED 205

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +++L  L  L +S+N L +LP  IG L ML+ LD+  N +  +P EI     L +    S
Sbjct: 206 IQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRLVVQS 265

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           NQL  +P ++G   NL+      N +  +PE++ 
Sbjct: 266 NQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           L+ L L  N +R++P  G   +  L  LD+S+N +  LP      +   +  L L+  +L
Sbjct: 2   LTMLSLRENKIRELPG-GIGQLVNLINLDVSHNHLEHLP--AEIGNCVQMSSLDLQHNEL 58

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELVS 542
            + P  I  L+ L  L L  N L S+P+   N T + E +   NN+S+LP  L+S
Sbjct: 59  LDLPETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLS 113


>gi|312378308|gb|EFR24924.1| hypothetical protein AND_10185 [Anopheles darlingi]
          Length = 657

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 197/411 (47%), Gaps = 35/411 (8%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL----KEDLRNLPLLTVLNV 75
           SL +VP E+++  +             L++L+L  N+I  L     E L  L        
Sbjct: 24  SLPNVPEEIFRYSN------------SLEELLLDANHIRDLPKSRSEFLPGLLQFGFAAT 71

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG- 134
             ++ +   A    L+ L+ L +S N I+KIP +I +   LV+ D S N++ ++P  +  
Sbjct: 72  GGSRRTSRCAGFFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRH 131

Query: 135 -RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            R L ++DF  S+N I  LP   +    ++ L +    LT L  +     + L  L   +
Sbjct: 132 LRSLQIADF--SSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDF-GCLSKLVSLELRE 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +PE+I  L++L RLDL  N I  +PS +    +L E ++ +N L  LP E+G L 
Sbjct: 189 NLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLK 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  LD+  N+L+E   E   L  L+ L LS N L  LP  + ++T L  L L  N L T
Sbjct: 249 KLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHT 308

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L  ++  G    + + +   L EN  +E   +  +++ +          L+++   L A+
Sbjct: 309 LHDTI--GCCVNMQELI---LTENFLAELPASIGNMVLL--------NNLNVDRNALVAV 355

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 423
           PS +    ++  L L  N +  LP EL  C+ L  L +S N ++  P A++
Sbjct: 356 PSALGHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALV 406



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 174/380 (45%), Gaps = 39/380 (10%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++    L+KL L+ N+I K+  D++N   L  L+VS N++ ++P  I  L  L+  D S 
Sbjct: 83  FFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSS 142

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N I ++P        L     +   L  LP   G    L   +   N + +LPE ++  +
Sbjct: 143 NPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQLT 202

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           K+ +LD+  N++  L ++L      L EL    N L  +P  IG L +L+ LD+ +NR+ 
Sbjct: 203 KLERLDLGDNEIDELPSHL-GYLPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSENRLE 261

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-YCVEACQLRLSV 279
            +P  I G   L + ++  N L  LP  + +L+ L  L L  N+L   +    C + +  
Sbjct: 262 ELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHTLHDTIGCCVNMQE 321

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L+ N L+ LP  IG M  L       N L   R++LV    P+ L + R         
Sbjct: 322 LILTENFLAELPASIGNMVLL-------NNLNVDRNALV--AVPSALGHCR--------- 363

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                         +L V    LSL    L+ +PSE+    E+  LD+S N +Q LP  L
Sbjct: 364 --------------KLGV----LSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYAL 405

Query: 400 SSCASLQTLILSRNKIKDWP 419
            +   L+ + LS N+ +  P
Sbjct: 406 VNL-QLKAVWLSENQSQPVP 424



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 137/255 (53%), Gaps = 4/255 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N ++ L E +  L  L  L++  N++ ELP+ +G L  L+ L +  N + ++
Sbjct: 181 LVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRL 240

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    LV  D S N+L+ELP  +G    L+D   S N + +LP  +A  + +S L 
Sbjct: 241 PPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILK 300

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + ELI ++N L  +P +IG++  L  L++ +N ++++PS++
Sbjct: 301 LDQNRLHTL-HDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSAL 359

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C  L    +  N L+ LP+ELG  S+L  LD+  N L+        L+L  + LS N 
Sbjct: 360 GHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALVNLQLKAVWLSENQ 419

Query: 287 LSGLP---PEIGKMT 298
              +P   P++ + T
Sbjct: 420 SQPVPTFQPDVDEST 434



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 40/331 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  +  +P+++ +NF            V+L +L ++ N I  + ED+R+L  L + 
Sbjct: 92  LGLSDNDILKIPSDI-QNF------------VNLVELDVSRNEIGDIPEDIRHLRSLQIA 138

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + S N +  LPA   +L  L  L ++  S+  +P + G  + LV  +   N LK LP S+
Sbjct: 139 DFSSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESI 198

Query: 134 GRCLNLSDFKASNNCITSLPEDLA----------DCSKMSK-------------LDVEGN 170
            +   L      +N I  LP  L           D +++ +             LDV  N
Sbjct: 199 SQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSEN 258

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  L    I     LT+L  S+NLL  +P  +  L+ L  L L QNR+ ++  +I  C 
Sbjct: 259 RLEELPEE-IGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHTLHDTIGCCV 317

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLS 288
           ++ E  +  N L+ LPA +G +  L  L++  N L      +  C+ +L VL L  N L+
Sbjct: 318 NMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSALGHCR-KLGVLSLRENKLT 376

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            LP E+G  + L  L ++GN L+ L  +LVN
Sbjct: 377 RLPSELGHCSELHVLDVSGNLLQHLPYALVN 407



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 149/336 (44%), Gaps = 40/336 (11%)

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L RL +L L  N IL IPS I    +L E  +  N +  +P ++  L  L   D  SN +
Sbjct: 86  LYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSSNPI 145

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                   QLR L+VL L++ SL+ LP + G ++ L  L L  N L+ L  S+       
Sbjct: 146 PRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQ----- 200

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L K  R  L +NE  E  +    L  +        +EL L+   L  +P EI    ++  
Sbjct: 201 LTKLERLDLGDNEIDELPSHLGYLPAL--------QELWLDHNQLQRLPPEIGLLKKLVC 252

Query: 385 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 444
           LD+S N ++ELP E+     L  L LS+N ++  P  +   L++LS LKLD N L  +  
Sbjct: 253 LDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGV-ARLTNLSILKLDQNRLHTL-- 309

Query: 445 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 504
                                  +       ++QEL L    L E P  I  +  L  L+
Sbjct: 310 -----------------------HDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLN 346

Query: 505 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           + +N+L ++P    +   L  L L +N ++ LP EL
Sbjct: 347 VDRNALVAVPSALGHCRKLGVLSLRENKLTRLPSEL 382



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 116/275 (42%), Gaps = 65/275 (23%)

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTL---RSSLVNGPTPAL 325
            + C  ++  +D  ++SL  +P EI + + +L +LLL  N +R L   RS  +    P L
Sbjct: 8   FKGCNRQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKSRSEFL----PGL 63

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L++            A+T                      G   ++  +  +    + KL
Sbjct: 64  LQF----------GFAATG---------------------GSRRTSRCAGFFRLYRLRKL 92

Query: 386 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 445
            LS N I ++P ++ +  +L  L +SRN+I D P+ I   L SL      +NP+ ++P+ 
Sbjct: 93  GLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDI-RHLRSLQIADFSSNPIPRLPAG 151

Query: 446 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
                                    FS L +L  L L  M L   P D   L +L  L+L
Sbjct: 152 -------------------------FSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLEL 186

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            +N L+++PE    LT L  LDL DN I  LP  L
Sbjct: 187 RENLLKNLPESISQLTKLERLDLGDNEIDELPSHL 221


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 30/310 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + ++ +++     + KL ++ N+LT      I     L  L  S N L   P+ IG L 
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKE-IGKLQNLKSLFLSNNQLTTFPKEIGKLQ 208

Query: 208 RLIRLDLHQNRILS-----------------------IPSSISGCCSLAEFYMGNNALSA 244
            L  L LH N++ +                       +P  I    +L   Y+ +N    
Sbjct: 209 NLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKI 268

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L
Sbjct: 269 LPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 328

Query: 304 LLTGNPLRTL 313
            L  N L T+
Sbjct: 329 NLDANQLTTI 338



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 94  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKT 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL   P  +G+  NL     SNN +T+ P+++     + +L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT  +   I     L  L+ + N    +PE IG L  L  L LH N+   +P  
Sbjct: 214 YLHDNQLTTFTKE-IGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKE 272

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 333 NQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 155/346 (44%), Gaps = 45/346 (13%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S   + +LPE +     +  LD+  N+L +L                        P+ I 
Sbjct: 55  SEQKLKALPEKIGQLKNLQMLDLSDNQLIIL------------------------PKEIR 90

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+L  L  L+L +NQ
Sbjct: 91  QLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQ 150

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           LK    E  QL+ L  L L NN L+  P EIGK+  L+ L L+ N L T    +  G   
Sbjct: 151 LKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI--GKLQ 208

Query: 324 ALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            L + YL        D++ +T  +++  +     +       +      +P EI     +
Sbjct: 209 NLQELYLH-------DNQLTTFTKEIGQLKNLRILLLNNNQFK-----ILPEEIGHLKNL 256

Query: 383 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 442
             L L  N  + LP E+    +LQ L LS N+ K  P      L +L  L LD N L  +
Sbjct: 257 QALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKNLKMLSLDANQLTAL 315

Query: 443 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
           P +  K +  L++L+L  N + ++P+      L +LQ LYLR  QL
Sbjct: 316 PKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQL 358



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 138/332 (41%), Gaps = 42/332 (12%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S  +LK LP  +G+  NL     S+N +  LP+++     + +L +  N+LT      I 
Sbjct: 55  SEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKE-IE 113

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L +L  S N L  +P  IG L  L  L+L  N++ +I   I    +L + Y+ NN 
Sbjct: 114 QLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQ 173

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L+A P E+GKL  L +L L                      SNN L+  P EIGK+  L+
Sbjct: 174 LTAFPKEIGKLQNLKSLFL----------------------SNNQLTTFPKEIGKLQNLQ 211

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEASTTK--EDLITMATRLS 356
           +L L  N L T    +       +L    ++   LPE    E    K  + L     +  
Sbjct: 212 ELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPE----EIGHLKNLQALYLHDNQFK 267

Query: 357 VTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 407
           +  KE         L L       IP E  +   +  L L  N +  LP E+    +L+ 
Sbjct: 268 ILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327

Query: 408 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 439
           L L  N++   P  I   L +L  L L NN L
Sbjct: 328 LNLDANQLTTIPKEI-GQLQNLQTLYLRNNQL 358



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 40/305 (13%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +    L ALP ++G+L  L  LDL  NQL     E  QL+ L  L L+ N L+  P EI 
Sbjct: 54  LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 113

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++ +L KL L+ N L  L         P  +  L++                        
Sbjct: 114 QLKSLHKLYLSNNQLTIL---------PVEIGQLQN------------------------ 140

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
               +EL+L    L  I  EI +   + KL L  N +   P E+    +L++L LS N++
Sbjct: 141 ---LRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQL 197

Query: 416 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 475
             +P  I   L +L  L L +N L     +  +   +  +L  +     LPE      L 
Sbjct: 198 TTFPKEI-GKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPE--EIGHLK 254

Query: 476 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 535
           +LQ LYL   Q +  P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++A
Sbjct: 255 NLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA 314

Query: 536 LPPEL 540
           LP E+
Sbjct: 315 LPKEI 319



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L+ +  E+              +  +LQKL L +N +    +++  L  L  
Sbjct: 143 ELNLWNNQLKTISKEI-------------EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKS 189

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L+  P  IG+L  L+ L +  N +     EIG    L     ++NQ K LP  
Sbjct: 190 LFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEE 249

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL      +N    LP+++     +  L +  N+   +          L  L   
Sbjct: 250 IGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEF-GQLKNLKMLSLD 308

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            N L  +P+ IG L  L  L+L  N++ +IP  I    +L   Y+ NN LS
Sbjct: 309 ANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 359



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 408
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 409 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 468
            L+ N++  +P  I   L SL  L L NN L  +P +    +  L+ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLRELNL-WNNQLKTIS 155

Query: 469 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 528
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 529 SDNNISALPPEL 540
            DN ++    E+
Sbjct: 216 HDNQLTTFTKEI 227



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E++ +L  L  L +  N+   LP  IG+L  L+ L +S+N    IP E G    L   
Sbjct: 246 LPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKML 305

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
              +NQL  LP  +G+  NL       N +T++P+++     +  L +  N+L++
Sbjct: 306 SLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSI 360


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 195/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+               L   E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYLPDSI-------------GGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     IT L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 204/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 ISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S+N + +LP +                     P   S  ++  L+L  
Sbjct: 295 IGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+A+P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTALPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269


>gi|115466176|ref|NP_001056687.1| Os06g0130100 [Oryza sativa Japonica Group]
 gi|33242913|gb|AAQ01160.1| transmembrane protein kinase [Oryza sativa]
 gi|113594727|dbj|BAF18601.1| Os06g0130100 [Oryza sativa Japonica Group]
          Length = 999

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 223/476 (46%), Gaps = 50/476 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLN 138
            E+  AIGEL  L+ +D+  N +  +IPDEIG   +L   D S N L  ++P S+ +   
Sbjct: 89  GEISPAIGELKNLQFVDLKGNKLTGQIPDEIGDCISLKYLDLSGNLLYGDIPFSISKLKQ 148

Query: 139 LSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L +    NN +T  +P  L+    +  LD+  N+LT     LI    +L  L    N L 
Sbjct: 149 LEELILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLT 208

Query: 198 G-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +   +  L+ L   D+  N +  +IP SI  C S     +  N +S  +P  +G L +
Sbjct: 209 GTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFL-Q 267

Query: 255 LGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           + TL L  N+L     +   L   L+VLDLS N L G +P  +G ++   KL L GN L 
Sbjct: 268 VATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKL- 326

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  P  L  + S+L                   + L +   EL      +  
Sbjct: 327 -------TGVIPPELGNM-SKL-------------------SYLQLNDNEL------VGT 353

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP+E+ +  E+ +L+L+ N++Q  +P  +SSC +L    +  NK+     A    L SL+
Sbjct: 354 IPAELGKLEELFELNLANNNLQGPIPANISSCTALNKFNVYGNKLNGSIPAGFQKLESLT 413

Query: 431 CLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L +N  +  +PS+    I  L  LDLSYN  S P       L HL EL L +  L  
Sbjct: 414 YLNLSSNNFKGNIPSE-LGHIINLDTLDLSYNEFSGPVPATIGDLEHLLELNLSKNHLDG 472

Query: 490 -APTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNN-ISALPPELVS 542
             P +   L+ ++++D+S N+L  S+PE    L +L  L L++NN +  +P +L +
Sbjct: 473 PVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNLVGEIPAQLAN 528



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 163/369 (44%), Gaps = 68/369 (18%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALV 117
           + E + N     +L++S+N++S E+P  IG L +  +L +  N +  KIPD IG   AL 
Sbjct: 235 IPESIGNCTSFEILDISYNQISGEIPYNIGFLQV-ATLSLQGNRLTGKIPDVIGLMQALA 293

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
             D S N+L                      +  +P  L + S   KL + GNKLT +  
Sbjct: 294 VLDLSENEL----------------------VGPIPSILGNLSYTGKLYLHGNKLTGVIP 331

Query: 178 NLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEF 235
             + + + L+ L  + N L G +P  +G L  L  L+L  N +   IP++IS C +L +F
Sbjct: 332 PELGNMSKLSYLQLNDNELVGTIPAELGKLEELFELNLANNNLQGPIPANISSCTALNKF 391

Query: 236 -YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LP 291
              GN    ++PA   KL  L  L+L SN  K          + L  LDLS N  SG +P
Sbjct: 392 NVYGNKLNGSIPAGFQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEFSGPVP 451

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG +  L +L L+ N L        +GP PA    LRS                +I M
Sbjct: 452 ATIGDLEHLLELNLSKNHL--------DGPVPAEFGNLRSV--------------QVIDM 489

Query: 352 ATRLSVTSKELSLEGMNLSA-IPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLI 409
           +               NLS  +P E+ +   +  L L+ N+ + E+P +L++C SL  L 
Sbjct: 490 SNN-------------NLSGSLPEELGQLQNLDSLILNNNNLVGEIPAQLANCFSLNNLA 536

Query: 410 LSRNKIKDW 418
                I+ +
Sbjct: 537 FQEFVIQQF 545



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 194/434 (44%), Gaps = 75/434 (17%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L++LIL +N +   +   L  +P L  L+++ N+L+ ++P  I    +L+ L +  NS+ 
Sbjct: 149 LEELILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLT 208

Query: 105 KI--PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
               PD +   T L  FD   N L   +P S+G C +      S N I+  +P ++    
Sbjct: 209 GTLSPD-MCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFL- 266

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
           +++ L ++GN+LT    ++I     L  L  S+N L G +P  +G+LS   +L LH N++
Sbjct: 267 QVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKL 326

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLK----------- 266
              IP  +     L+   + +N L   +PAELGKL +L  L+L +N L+           
Sbjct: 327 TGVIPPELGNMSKLSYLQLNDNELVGTIPAELGKLEELFELNLANNNLQGPIPANISSCT 386

Query: 267 ---EYCVEACQLR------------LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
              ++ V   +L             L+ L+LS+N+  G +P E+G +  L  L L+ N  
Sbjct: 387 ALNKFNVYGNKLNGSIPAGFQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEF 446

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                   +GP PA +  L   L                           EL+L   +L 
Sbjct: 447 --------SGPVPATIGDLEHLL---------------------------ELNLSKNHLD 471

Query: 371 A-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
             +P+E      +  +D+S N++   LP EL    +L +LIL+ N +     A L +  S
Sbjct: 472 GPVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNLVGEIPAQLANCFS 531

Query: 429 LSCLKLDNNPLRQV 442
           L+ L      ++Q 
Sbjct: 532 LNNLAFQEFVIQQF 545


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 7/260 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N  S    E      +RKLL
Sbjct: 355 NQFSSQEKE-----KIRKLL 369



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|355747856|gb|EHH52353.1| hypothetical protein EGM_12782 [Macaca fascicularis]
          Length = 863

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 252/576 (43%), Gaps = 57/576 (9%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKLILAHN 55
             + + ++NL  + L++ P ++ K           N  +  +G    + + L+ L L  N
Sbjct: 142 TCKDNFTVNLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGADSGDLLGLEILSLQEN 201

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS-------------------- 95
            +  L  +++ L  L +LNVSHN +S +P  I +L  ++                     
Sbjct: 202 GLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGN 261

Query: 96  ---LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
              L +  N +  IPD + S   L   +   NQL   P +L     L     + N I+SL
Sbjct: 262 LEILSLGKNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSL 321

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++ +   +  L ++ NKLT L+   I     + EL  + N L  +   I +   L  L
Sbjct: 322 PKEIRELKNLETLLLDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRIL 380

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N + +IP  I  C  L    + +N L+ LP  + KL+ L  L ++ N + +     
Sbjct: 381 ILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI 440

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L  +  L+ S N ++G+P EI     + K+ L    +      L    +   L YL  
Sbjct: 441 SHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYXKIMYFPLGLCALDS---LYYL-- 495

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLE-GMNLSAIPSEIW-EAGEITKLDLSR 389
                     S     +  +   +S + + L LE   N   I SE +     +  LDL +
Sbjct: 496 ----------SVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGK 545

Query: 390 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 449
           N I+++P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   +
Sbjct: 546 NQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSD-ICN 603

Query: 450 IPMLQILDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 507
           +  +Q L+ S N     P E     SL  L    ++  +L   P ++  + QL+ LD+S 
Sbjct: 604 LKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISN 663

Query: 508 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELVSV 543
           N+++ IP     L +L  L   +N IS +PP L+S+
Sbjct: 664 NAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSL 699



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 180/395 (45%), Gaps = 45/395 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ LIL  N ++ + E +    +L  L +S NKL+ELP  I +L+ L+ L V+ N+++K
Sbjct: 376 ELRILILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVK 435

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D I     +   + S N +  +P  +  C  +   + +   I   P  L     +  L
Sbjct: 436 ITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYXKIMYFPLGLCALDSLYYL 495

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+S
Sbjct: 496 SVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPAS 554

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------------ 267
           IS   SL    +  N     P EL  L  L  LDL  NQL++                  
Sbjct: 555 ISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSS 614

Query: 268 -----YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                + +E CQL+    L++  +    L+ LP E+  MT L++L ++ N +R +     
Sbjct: 615 NQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREI----- 669

Query: 319 NGPTPALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
               P  +  LR+ +     +++ S     L+++        ++L+L G NL+A+PS I+
Sbjct: 670 ----PRNIGELRNLVSLHAYNNQISYIPPSLLSLNDL-----QQLNLSGNNLTALPSAIY 720

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 412
               + +++   N +  L P +  C   Q   ++R
Sbjct: 721 NLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 753



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 8/226 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
            + +   ++L+ L L  N I+K+   + N+  L VL +  NK    P  +  L  L+ LD
Sbjct: 529 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLD 588

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-----LNLSDFKASNNCITSL 152
           +S N + KI  +I +   + K + SSNQ    P  L +      LN+S  K     +T L
Sbjct: 589 LSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRK--LTRL 646

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P +L++ +++ +LD+  N +  +  N I     L  L A  N ++ +P ++ SL+ L +L
Sbjct: 647 PGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYIPPSLLSLNDLQQL 705

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +L  N + ++PS+I    SL E    +N L   P E+ K  +L T+
Sbjct: 706 NLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 196/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L    LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLRQLTYLDVSKNNIEMVEEGISTCE-NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L         P  +  LRS     E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYL---------PDSIGGLRSI----EELDCSFNEIEALPSSIGQLTNMRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     IT L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 204/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              +E  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------REFWMDGNRLTFIPGFIGSLRQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S+C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 VSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S+N I +LP +                     P   +  ++  L+L  
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHC 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+ +P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTTLPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +  LS N++  LP
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 155/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLNNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P+EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L  N L  L
Sbjct: 294 EIEQLKNLQTLFLNNNQLTIL 314



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L  +
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L L+NN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L L+ N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 25/245 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +D+  L  L  L++S+N+L+ LP  I +L  LKSL +S N    
Sbjct: 139 NLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFAT 198

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L     ++NQ+  LP+ + +   L     S+N + +LP+++     +  L
Sbjct: 199 FPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTL 258

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L                        P+ +G L  L  LDL  N++ ++P  
Sbjct: 259 DLSYNQLTIL------------------------PKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     +NN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P++  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPNE-IEQLKNLQVLDLGSNQLTILPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|354548679|emb|CCE45416.1| hypothetical protein CPAR2_704300 [Candida parapsilosis]
          Length = 1641

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 219/495 (44%), Gaps = 69/495 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT +N S N  S+ P  + E   L  L++  N +  +P +I S   L     +SNQL  L
Sbjct: 435 LTSVNFSRNGCSKFPTNLLEAVGLTHLNLEMNFLDDLPLKINSLNNLTHLKLNSNQLSSL 494

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P S G   NL     S+N   + PE + D  K+ +LD+  N L+ L  +++   ++    
Sbjct: 495 PKSFGELKNLVYLNLSSNYFVNYPEPVNDLDKLIELDLSYNDLSYLPESMVNLKSLQKLN 554

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           + +  L   +P+ +  L  L RLD+  N+I ++   +    +L   Y   N++SA     
Sbjct: 555 LCTNKLDKALPDFLAGLQSLKRLDIRYNQIANV-DVLGELPNLEVLYASRNSISAF---C 610

Query: 250 GKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLTG 307
            ++  L  L    N + E   +   Q+ L++LDLS   ++ +P E   K+  + KL+L  
Sbjct: 611 DRMENLRLLHFDKNPITELKFINQLQM-LNILDLSKAKITAIPAEFMIKIPNIEKLVLDK 669

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL         P  L  L                       TRLS     LS+   
Sbjct: 670 NHLVTL---------PQELGQL-----------------------TRLSY----LSIYSN 693

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD---AILT 424
           NL A+PS I     +  L+L  NSIQ LP E+ +  SL  L ++ N +  +P    AI  
Sbjct: 694 NLQAVPSTIGNLSNLQYLNLHSNSIQTLPDEIWNLRSLAVLNVASNNLTSFPKPPFAIAK 753

Query: 425 SLSS----------------LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 467
            +SS                LS L + +N L     D    +  L+ L++SYN +  +PE
Sbjct: 754 RISSSNDFGELPASESIADALSVLTISDNRLNDDCFDAISFLVGLKSLNMSYNDLIEIPE 813

Query: 468 NPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
               S +  L ELYL    L   P D L +L+ L++L ++ N L S+P     LT+L  L
Sbjct: 814 G-SISRMRRLNELYLSGNDLTTLPADDLEQLKALKLLYINNNKLVSLPAELSKLTNLQHL 872

Query: 527 DLSDN----NISALP 537
           D+  N    NIS  P
Sbjct: 873 DVGSNQLKYNISNWP 887



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 27/335 (8%)

Query: 211 RLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +L++ +N  + IP   I  C +L       N  S  P  L +   L  L+L  N L +  
Sbjct: 413 KLNVSENPSIYIPLDFIQSCTNLTSVNFSRNGCSKFPTNLLEAVGLTHLNLEMNFLDDLP 472

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA--LL 326
           ++   L  L+ L L++N LS LP   G++  L  L L+ N         VN P P   L 
Sbjct: 473 LKINSLNNLTHLKLNSNQLSSLPKSFGELKNLVYLNLSSN-------YFVNYPEPVNDLD 525

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K +   L  N+ S    +  +L ++  +L++ + +L        A+P  +     + +LD
Sbjct: 526 KLIELDLSYNDLSYLPESMVNLKSLQ-KLNLCTNKLD------KALPDFLAGLQSLKRLD 578

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +  N I  +   L    +L+ L  SRN I  + D     + +L  L  D NP+ ++    
Sbjct: 579 IRYNQIANVDV-LGELPNLEVLYASRNSISAFCD----RMENLRLLHFDKNPITELKF-- 631

Query: 447 FKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 505
              + ML ILDLS   I ++P       +P++++L L +  L   P ++ +L +L  L +
Sbjct: 632 INQLQMLNILDLSKAKITAIPAEF-MIKIPNIEKLVLDKNHLVTLPQELGQLTRLSYLSI 690

Query: 506 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
             N+LQ++P    NL++L  L+L  N+I  LP E+
Sbjct: 691 YSNNLQAVPSTIGNLSNLQYLNLHSNSIQTLPDEI 725



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 7/191 (3%)

Query: 355 LSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPE-LSSCASLQTLILSR 412
           LS    ++++  +NL  IP    +   EI KL++S N    +P + + SC +L ++  SR
Sbjct: 383 LSKNYVDVNISSLNLKNIPIIFHQHTYEIEKLNVSENPSIYIPLDFIQSCTNLTSVNFSR 442

Query: 413 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 471
           N    +P  +L ++  L+ L L+ N L  +P      +  L  L L+ N ++SLP++  F
Sbjct: 443 NGCSKFPTNLLEAVG-LTHLNLEMNFLDDLPLK-INSLNNLTHLKLNSNQLSSLPKS--F 498

Query: 472 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 531
             L +L  L L        P  +  L +L  LDLS N L  +PE   NL SL +L+L  N
Sbjct: 499 GELKNLVYLNLSSNYFVNYPEPVNDLDKLIELDLSYNDLSYLPESMVNLKSLQKLNLCTN 558

Query: 532 NISALPPELVS 542
            +    P+ ++
Sbjct: 559 KLDKALPDFLA 569



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 36/193 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE----------- 62
           LNL + S++ +P+E+             W    L  L +A NN+    +           
Sbjct: 711 LNLHSNSIQTLPDEI-------------WNLRSLAVLNVASNNLTSFPKPPFAIAKRISS 757

Query: 63  --DLRNLPL-------LTVLNVSHNKLSE-LPAAIGELHMLKSLDVSFNSIMKIPD-EIG 111
             D   LP        L+VL +S N+L++    AI  L  LKSL++S+N +++IP+  I 
Sbjct: 758 SNDFGELPASESIADALSVLTISDNRLNDDCFDAISFLVGLKSLNMSYNDLIEIPEGSIS 817

Query: 112 SATALVKFDCSSNQLKELPSS-LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
               L +   S N L  LP+  L +   L     +NN + SLP +L+  + +  LDV  N
Sbjct: 818 RMRRLNELYLSGNDLTTLPADDLEQLKALKLLYINNNKLVSLPAELSKLTNLQHLDVGSN 877

Query: 171 KLTVLSNNLIASW 183
           +L    +N    W
Sbjct: 878 QLKYNISNWPYDW 890


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 2/240 (0%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L     SSNQL  LP   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL +   S+N +T+LP+++     +  L+++ N+LT L    I     L  L  S N
Sbjct: 61  KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE-IEQLKNLQTLNLSDN 119

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  L+L  N++ ++P  I    +L    +  N L+ L  E+GKL  
Sbjct: 120 QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQN 179

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+LHSNQL     E  QL+ L  L LS N L  LP EIG++  L++L L  N L  L
Sbjct: 180 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 239



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 1/231 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N +  L  +   L  L  LN+S N+L+ LP  IG+L  L++L++  N +  
Sbjct: 41  NLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT 100

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EI     L   + S NQL  LP  +G+  NL     S+N +T+LP ++     +  L
Sbjct: 101 LFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 160

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++ GN+LT LS   I     L +L    N L  + + I  L  L  L L  NR++ +P  
Sbjct: 161 NLSGNQLTTLSIE-IGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE 219

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           I    +L E  + NN L+ALP E+G+L  L TL L+ N+L  +  E  QL+
Sbjct: 220 IGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 270



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 143/326 (43%), Gaps = 61/326 (18%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +S N +  +P EIG    L + D   N+L  LP  +G+  NL     S+N +T+LP +  
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +L++  N+LT L                        P+ IG L  L  L+L  N
Sbjct: 61  KLENLQELNLSDNQLTTL------------------------PQEIGQLQNLQTLNLKSN 96

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ ++   I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ 
Sbjct: 97  QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQN 156

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L+LS N L+ L  EIGK+  L+ L L  N L TL   +                   
Sbjct: 157 LHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEI------------------- 197

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                    E L  + T        LSL    L  +P EI +   + +L+L  N +  LP
Sbjct: 198 ---------EQLKNLQT--------LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALP 240

Query: 397 PELSSCASLQTLILSRNKIKDWPDAI 422
            E+    +LQTL L +N++  +P  I
Sbjct: 241 IEIGQLQNLQTLSLYKNRLMTFPKEI 266



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L  ++  L  L  L +S N+L+ LP   G+L  L+ L++S N +  
Sbjct: 18  NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 77

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  SNQL  L   + +  NL     S+N +T+LP ++     +  L
Sbjct: 78  LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 137

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L  S N L  +   IG L  L  L+LH N++ ++   
Sbjct: 138 NLSDNQLTTLPIE-IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKE 196

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L  LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  
Sbjct: 197 IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYK 256

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L   P EIG++  L+ L L G+
Sbjct: 257 NRLMTFPKEIGQLKNLQTLYLGGH 280



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 28/173 (16%)

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 428
           L+ +P EI +   + +LDL  N +  LP E+    +LQTL LS N++   P         
Sbjct: 6   LTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE------- 58

Query: 429 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 487
               KL+N                LQ L+LS N + +LP+      L +LQ L L+  QL
Sbjct: 59  --SGKLEN----------------LQELNLSDNQLTTLPQ--EIGQLQNLQTLNLKSNQL 98

Query: 488 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
                +I +L+ L+ L+LS N L ++P     L +L  L+LSDN ++ LP E+
Sbjct: 99  TTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEI 151



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 26/154 (16%)

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S N +  LP E+    +LQ L L  N++   P  I   L +L  L L +N L  +P + 
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEI-GKLQNLQTLYLSSNQLTTLPRES 59

Query: 447 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
            K                         L +LQEL L   QL   P +I +LQ L+ L+L 
Sbjct: 60  GK-------------------------LENLQELNLSDNQLTTLPQEIGQLQNLQTLNLK 94

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            N L ++ +  + L +L  L+LSDN ++ LP E+
Sbjct: 95  SNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI 128


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 195/430 (45%), Gaps = 53/430 (12%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+               L   E+ + S  + + +  +       +  + +  
Sbjct: 286 NQLMYLPDSI-------------GGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 427
            L  +P EI     IT L L  N ++ LP E+     L+ + LS N++K+ P +  T L 
Sbjct: 333 YLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFS-FTKLQ 391

Query: 428 SLSCLKLDNN 437
            L+ + L +N
Sbjct: 392 QLTAMWLSDN 401



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 204/474 (43%), Gaps = 107/474 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTALPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTFIPGFIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 446
           +S+N+I+ +   +S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D 
Sbjct: 237 ISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DS 294

Query: 447 FKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRR 484
              +  ++ LD S+N + +LP +                     P   S  ++  L+L  
Sbjct: 295 IGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHS 354

Query: 485 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
            +L   P ++  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 355 NKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 61/292 (20%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N        
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN-------- 67

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                         +  +LSL   +L+A+P+ I     + +LD+
Sbjct: 68  ----------------------------CQSLHKLSLPDNDLTALPASIANLINLRELDV 99

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N IQE P  + +C  L  +  S N I   PD   + L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG-FSQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 448 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 485
             +  LQIL+L  N +  LP+              +  F+ +P        L+E ++   
Sbjct: 158 GRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGN 217

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           +L   P  I  L+QL  LD+S+N+++ + EG     +L +L LS N++  LP
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYLR  +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLRSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|52075629|dbj|BAD44800.1| putative transmembrane protein kinase [Oryza sativa Japonica Group]
 gi|55295812|dbj|BAD67663.1| putative transmembrane protein kinase [Oryza sativa Japonica Group]
 gi|218197494|gb|EEC79921.1| hypothetical protein OsI_21484 [Oryza sativa Indica Group]
          Length = 980

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 223/476 (46%), Gaps = 50/476 (10%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIM-KIPDEIGSATALVKFDCSSNQL-KELPSSLGRCLN 138
            E+  AIGEL  L+ +D+  N +  +IPDEIG   +L   D S N L  ++P S+ +   
Sbjct: 89  GEISPAIGELKNLQFVDLKGNKLTGQIPDEIGDCISLKYLDLSGNLLYGDIPFSISKLKQ 148

Query: 139 LSDFKASNNCITS-LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L +    NN +T  +P  L+    +  LD+  N+LT     LI    +L  L    N L 
Sbjct: 149 LEELILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLT 208

Query: 198 G-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSK 254
           G +   +  L+ L   D+  N +  +IP SI  C S     +  N +S  +P  +G L +
Sbjct: 209 GTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFL-Q 267

Query: 255 LGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR 311
           + TL L  N+L     +   L   L+VLDLS N L G +P  +G ++   KL L GN L 
Sbjct: 268 VATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKL- 326

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
                   G  P  L  + S+L                   + L +   EL      +  
Sbjct: 327 -------TGVIPPELGNM-SKL-------------------SYLQLNDNEL------VGT 353

Query: 372 IPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           IP+E+ +  E+ +L+L+ N++Q  +P  +SSC +L    +  NK+     A    L SL+
Sbjct: 354 IPAELGKLEELFELNLANNNLQGPIPANISSCTALNKFNVYGNKLNGSIPAGFQKLESLT 413

Query: 431 CLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L +N  +  +PS+    I  L  LDLSYN  S P       L HL EL L +  L  
Sbjct: 414 YLNLSSNNFKGNIPSE-LGHIINLDTLDLSYNEFSGPVPATIGDLEHLLELNLSKNHLDG 472

Query: 490 -APTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNN-ISALPPELVS 542
             P +   L+ ++++D+S N+L  S+PE    L +L  L L++NN +  +P +L +
Sbjct: 473 PVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNLVGEIPAQLAN 528



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 75/407 (18%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           L++LIL +N +   +   L  +P L  L+++ N+L+ ++P  I    +L+ L +  NS+ 
Sbjct: 149 LEELILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLT 208

Query: 105 KI--PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
               PD +   T L  FD   N L   +P S+G C +      S N I+  +P ++    
Sbjct: 209 GTLSPD-MCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFL- 266

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 219
           +++ L ++GN+LT    ++I     L  L  S+N L G +P  +G+LS   +L LH N++
Sbjct: 267 QVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKL 326

Query: 220 LS-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLK----------- 266
              IP  +     L+   + +N L   +PAELGKL +L  L+L +N L+           
Sbjct: 327 TGVIPPELGNMSKLSYLQLNDNELVGTIPAELGKLEELFELNLANNNLQGPIPANISSCT 386

Query: 267 ---EYCVEACQLR------------LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL 310
              ++ V   +L             L+ L+LS+N+  G +P E+G +  L  L L+ N  
Sbjct: 387 ALNKFNVYGNKLNGSIPAGFQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEF 446

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                   +GP PA +  L   L                           EL+L   +L 
Sbjct: 447 --------SGPVPATIGDLEHLL---------------------------ELNLSKNHLD 471

Query: 371 A-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKI 415
             +P+E      +  +D+S N++   LP EL    +L +LIL+ N +
Sbjct: 472 GPVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNL 518



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 64  LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
            + L  LT LN+S N     +P+ +G +  L +LD+S+N     +P  IG    L++ + 
Sbjct: 406 FQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEFSGPVPATIGDLEHLLELNL 465

Query: 122 SSNQLKE-LPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLT 173
           S N L   +P+  G   ++     SNN ++ SLPE+L     +  L +  N L 
Sbjct: 466 SKNHLDGPVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNLDSLILNNNNLV 519


>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
 gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
          Length = 937

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 142/273 (52%), Gaps = 2/273 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N ++ L  ++  L  L  L ++ N L ELP  IG L  L  L ++ N +  +
Sbjct: 44  LKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHL 103

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E G+   L +   ++NQL  LP+  GR +NL     SNN +T LPE+  +  K+S LD
Sbjct: 104 PQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLD 163

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ NKL  L N  I     L++L  S N L  +P  I  +  LI L+   N++ S+P  +
Sbjct: 164 LKSNKLESL-NPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGEL 222

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L    + +N +  LP E+G+L  L TL+L  N L     E  +L +L  L LS+N
Sbjct: 223 GELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHN 282

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L  +P EI K+  L  L L  N L+ L + ++
Sbjct: 283 YLDNIPSEIEKLRKLTTLYLGYNKLKILPTGII 315



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 164/349 (46%), Gaps = 41/349 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKF-DCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +++LD++F  +  +P EIG     +KF D  +N+LK LP  +G+  +L+    + N +  
Sbjct: 20  VETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEE 79

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++ + S + +L +  NKL+                         +P+  G+L  L  
Sbjct: 80  LPPEIGNLSTLHRLSLTENKLS------------------------HLPQEFGNLIGLTE 115

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  N++ S+P+      +L    + NN L+ LP E G L KL  LDL SN+L+    E
Sbjct: 116 LYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPE 175

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L+ LS L++S N L+ LPP+I ++ +L +L  + N L +L   L       LL    
Sbjct: 176 IRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSH 235

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +++ E    E    K +L T           L+L   NL  +PSEI E  ++  L LS N
Sbjct: 236 NKI-EKLPREIGQLK-NLNT-----------LNLIYNNLYYLPSEIGELSQLIDLRLSHN 282

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNN 437
            +  +P E+     L TL L  NK+K  P  I  L     L+ L L  N
Sbjct: 283 YLDNIPSEIEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKEN 331



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 44/250 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L L++N +  L E+  NL  L+ L++  NKL  L   I +L  L  L++S+N + 
Sbjct: 134 INLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLT 193

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +I    +L++ + S NQL  LP  LG   NL     S+N I  LP ++     +  
Sbjct: 194 NLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIEKLPREIGQLKNL-- 251

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                N L ++ NNL                   +P  IG LS+LI L L  N + +IPS
Sbjct: 252 -----NTLNLIYNNLYY-----------------LPSEIGELSQLIDLRLSHNYLDNIPS 289

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L   Y+G N L  LP  + +L + G                   +L++LDL  
Sbjct: 290 EIEKLRKLTTLYLGYNKLKILPTGIIQLVRFG-------------------QLTILDLKE 330

Query: 285 NSLSGLPPEI 294
           N LS +PPEI
Sbjct: 331 NLLS-IPPEI 339



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 153/365 (41%), Gaps = 47/365 (12%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A  +K+  LD+   +LT L   +      L  L    N L  +P  IG L  L  L L  
Sbjct: 15  AARNKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTT 74

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N +  +P  I    +L    +  N LS LP E G L  L  L L +NQL     E  +L 
Sbjct: 75  NYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLI 134

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  L LSNN L+ LP E G +  L  L L  N L +L       P    LK L      
Sbjct: 135 NLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESL------NPEIRDLKQL------ 182

Query: 336 NEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
              S+ + +   L  +  ++S      EL+     L+++P E+ E   +  L+LS N I+
Sbjct: 183 ---SKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIE 239

Query: 394 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 453
           +LP E+    +L TL L  N +   P  I   LS L  L+L +N L  +PS+        
Sbjct: 240 KLPREIGQLKNLNTLNLIYNNLYYLPSEI-GELSQLIDLRLSHNYLDNIPSE-------- 290

Query: 454 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL---RLQQLRILDLSQNSL 510
                               L  L  LYL   +L+  PT I+   R  QL ILDL +N L
Sbjct: 291 -----------------IEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLL 333

Query: 511 QSIPE 515
              PE
Sbjct: 334 SIPPE 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 43/291 (14%)

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +K+ TLDL   +L     E  QL+  L  LDL NN L  LPPEIGK+ +L  L LT N L
Sbjct: 18  NKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYL 77

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   + N                             ++   RLS+T  +LS       
Sbjct: 78  EELPPEIGN-----------------------------LSTLHRLSLTENKLS------- 101

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
            +P E      +T+L L+ N +  LP E     +L+ L LS N++   P+    +L  LS
Sbjct: 102 HLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEE-FGNLKKLS 160

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L +N L  +  +  +D+  L  L++SYN + +LP  P  S +  L EL     QL  
Sbjct: 161 WLDLKSNKLESLNPE-IRDLKQLSKLNISYNQLTNLP--PQISEVESLIELNASYNQLTS 217

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
            P ++  L  L +L+LS N ++ +P     L +L  L+L  NN+  LP E+
Sbjct: 218 LPGELGELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEI 268



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 92/194 (47%), Gaps = 29/194 (14%)

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPELSSCASLQ 406
           LI  A R  V + +L+ +   L+++P EI +    +  LDL  N ++ LPPE+    SL 
Sbjct: 11  LIEEAARNKVETLDLTFK--RLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLN 68

Query: 407 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 466
            L L+ N +++ P  I  +LS+L  L L  N L  +P +                     
Sbjct: 69  ALFLTTNYLEELPPEI-GNLSTLHRLSLTENKLSHLPQE--------------------- 106

Query: 467 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 526
               F +L  L ELYL   QL   PT+  RL  L  L LS N L  +PE F NL  L+ L
Sbjct: 107 ----FGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWL 162

Query: 527 DLSDNNISALPPEL 540
           DL  N + +L PE+
Sbjct: 163 DLKSNKLESLNPEI 176


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N+ 
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  EVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|186511604|ref|NP_192625.4| Leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|222423559|dbj|BAH19749.1| AT4G08850 [Arabidopsis thaliana]
 gi|332657283|gb|AEE82683.1| Leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 1009

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 248/554 (44%), Gaps = 70/554 (12%)

Query: 49  KLILAHNNIEKLKEDL--RNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIM- 104
           +L L +  IE   ED    +LP LT +++S N+ S   + + G    L+  D+S N ++ 
Sbjct: 97  RLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVG 156

Query: 105 KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSKM 162
           +IP E+G  + L       N+L   +PS +GR   +++    +N +T  +P    + +K+
Sbjct: 157 EIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKL 216

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS 221
             L +  N L+    + I +   L EL   +N L G +P + G+L  +  L++ +N++  
Sbjct: 217 VNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSG 276

Query: 222 -IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
            IP  I    +L    +  N L+  +P+ LG +  L  L L+ NQL            S+
Sbjct: 277 EIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESM 336

Query: 280 LDL--SNNSLSG-LPPEIGKMTTLRKLLLTGNPLR------------------------- 311
           +DL  S N L+G +P   GK+T L  L L  N L                          
Sbjct: 337 IDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTG 396

Query: 312 ---------------TLRSSLVNGPTPALLK----YLRSRLPENEDSEASTTKEDLITMA 352
                          TL  +   GP P  L+     +R R   N  S         I+ A
Sbjct: 397 FLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGD-------ISEA 449

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQ-ELPPELSSCASLQTLIL 410
             +  T   + L   N     S  WE  + +    LS NSI   +PPE+ +   L  L L
Sbjct: 450 FGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDL 509

Query: 411 SRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 469
           S N+I  + P++I ++++ +S L+L+ N L      G + +  L+ LDLS N  S    P
Sbjct: 510 SSNRITGELPESI-SNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPP 568

Query: 470 PFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELD 527
             ++LP L  + L R  L +  P  + +L QL++LDLS N L   I   F++L +L  LD
Sbjct: 569 TLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLD 628

Query: 528 LSDNNISA-LPPEL 540
           LS NN+S  +PP  
Sbjct: 629 LSHNNLSGQIPPSF 642



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 209/447 (46%), Gaps = 30/447 (6%)

Query: 46  DLQKLILAHNNIE-KLKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L L  NN+  K+     NL  +T+LN+  N+LS E+P  IG +  L +L +  N +
Sbjct: 239 NLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKL 298

Query: 104 MK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
              IP  +G+   L       NQL   +P  LG   ++ D + S N +T  +P+     +
Sbjct: 299 TGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLT 358

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            +  L +  N+L+      IA+ T LT L + + N    +P+TI    +L  L L  N  
Sbjct: 359 ALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHF 418

Query: 220 LS-IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCV---EACQ 274
              +P S+  C SL       N+ S   +E  G    L  +DL +N          E  Q
Sbjct: 419 EGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQ 478

Query: 275 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSR 332
            +L    LSNNS++G +PPEI  MT L +L L+ N +   L  S+ N     + +  + +
Sbjct: 479 -KLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISN-----INRISKLQ 532

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           L  N  S    +   L+T    L ++S   S      S IP  +     +  ++LSRN +
Sbjct: 533 LNGNRLSGKIPSGIRLLTNLEYLDLSSNRFS------SEIPPTLNNLPRLYYMNLSRNDL 586

Query: 393 -QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDI 450
            Q +P  L+  + LQ L LS N++     +   SL +L  L L +N L  Q+P   FKD+
Sbjct: 587 DQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPS-FKDM 645

Query: 451 PMLQILDLSYN--IASLPENPPFSSLP 475
             L  +D+S+N     +P+N  F + P
Sbjct: 646 LALTHVDVSHNNLQGPIPDNAAFRNAP 672


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 195/426 (45%), Gaps = 53/426 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 65  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 113 SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 172

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + LNL+    ++  +  LP +    +K+  L++  N L  L                  
Sbjct: 173 TQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTL------------------ 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL 
Sbjct: 215 ------PKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 268

Query: 254 KLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L 
Sbjct: 269 MLVYLDMSKNRIETVDMDISGCEA-LEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT 327

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L +++ N      L  L       E+ + S  + + +        + + L+++   L  
Sbjct: 328 MLPNTIGN------LSLL-------EEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPE 374

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 431
           +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+ 
Sbjct: 375 LPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFS-FTKLKELAA 433

Query: 432 LKLDNN 437
           L L +N
Sbjct: 434 LWLSDN 439



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 199/473 (42%), Gaps = 105/473 (22%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 57  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 94

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 95  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 153

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L+KL            
Sbjct: 154 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL------------ 201

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 202 ----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 242

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 243 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 275

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N I+ +  ++S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P +  
Sbjct: 276 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NTI 333

Query: 448 KDIPMLQILDLSYN-IASLPENPPF-----------SSLPHLQE----------LYLRRM 485
            ++ +L+  D S N + SLP    +           + LP L            + LR  
Sbjct: 334 GNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSN 393

Query: 486 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
           +L   P +I ++Q+LR+L+LS N L+++P  F  L  L  L LSDN   AL P
Sbjct: 394 KLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIP 446



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++  +
Sbjct: 201 LRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVL 260

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ L 
Sbjct: 261 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 320

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P  I
Sbjct: 321 VDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 379

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 380 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 439

Query: 286 SLSGLPP 292
               L P
Sbjct: 440 QSKALIP 446



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 42/270 (15%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 54  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 107

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            LR                              +LS+   +LS +P+ I     + +LD+
Sbjct: 108 ALR------------------------------KLSIPDNDLSNLPTTIASLVNLKELDI 137

Query: 388 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 447
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 138 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 195

Query: 448 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 506
             +  L+IL+L  N + +LP++     L  L+ L L   +  E P  + ++Q LR L + 
Sbjct: 196 GRLAKLRILELRENHLKTLPKS--MHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMD 253

Query: 507 QNSLQSIPEGFKNLTSLTELDLSDNNISAL 536
            N+LQ +P     L  L  LD+S N I  +
Sbjct: 254 NNALQVLPGSIGKLKMLVYLDMSKNRIETV 283


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 183/343 (53%), Gaps = 19/343 (5%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S ++ N + +++ + S +  LD+    + ++P  I    +L +  +  N L+A+P E+GK
Sbjct: 2   SHSIHNNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGK 61

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  N+LK    E  QL+ L+ LDL  N L  LP EIGK+  L++L L+GN L
Sbjct: 62  LRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQL 121

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+       +L+  R++L        +T  E+++ + + L +    L+L    + 
Sbjct: 122 TVLPPSIGQLQNLEILELFRNQL--------ATLPEEIVGLKS-LQI----LNLFENEIK 168

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 430
           ++P EI +   +  LDL +N I+ L  +     +L++L L  NK++++P A +  L SL 
Sbjct: 169 SLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP-ADIVQLKSLE 227

Query: 431 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 489
            L L+ N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L+L   +L  
Sbjct: 228 FLNLNYNRFKILPEEILQ-LENLQVLELTGNQLTSLPEG--IGRLEKLESLFLEGNRLTT 284

Query: 490 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 532
            P  I  L+ L+I+ L QN L +IPE   +L +L EL L D N
Sbjct: 285 LPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 164/359 (45%), Gaps = 41/359 (11%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           HNN+EK    L+N   + +L+VS  +L  LP  IG    L+ L +  N +  IP EIG  
Sbjct: 6   HNNLEK---SLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKL 62

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     + N+LK +P+ + +  NL+      N +  LP ++     + +L++ GN+LT
Sbjct: 63  RNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLT 122

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           VL  + I     L  L   +N L  +PE I  L  L  L+L +N I S+P  IS   +L 
Sbjct: 123 VLPPS-IGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLI 181

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              +G N +  L  +  +L  L +L+L  N+L+ +  +  QL+ L  L+L+ N    LP 
Sbjct: 182 WLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPE 241

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  L+ L LTGN L +L   +              RL + E               
Sbjct: 242 EILQLENLQVLELTGNQLTSLPEGI-------------GRLEKLES-------------- 274

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 411
                    L LEG  L+ +P  I     +  + L +N +  +P E+ S  +L+ L L 
Sbjct: 275 ---------LFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQ 324



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 145/303 (47%), Gaps = 12/303 (3%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L++S++ L  +P E+  ++N ++         A+        +L+ LILA N ++ +  +
Sbjct: 22  LDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENRLKTIPNE 81

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++  NKL  LP  IG+L  LK L++S N +  +P  IG    L   +   
Sbjct: 82  IEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFR 141

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +    +L       N I SLP++++  S +  LD+  NK+  LS +     
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDF-KRL 200

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L    N L   P  I  L  L  L+L+ NR   +P  I    +L    +  N L+
Sbjct: 201 QNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +LP  +G+L KL +L L  N+L         LR L ++ L  N L+ +P EIG +  L++
Sbjct: 261 SLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKE 320

Query: 303 LLL 305
           L L
Sbjct: 321 LYL 323



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 12/183 (6%)

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 414
           L V+S+EL         +P EI     + KL L  N +  +P E+    +L+TLIL+ N+
Sbjct: 22  LDVSSQELE-------TLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENR 74

Query: 415 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 473
           +K  P+ I   L +L+ L L  N L+ +P++  K +  L+ L+LS N +  LP  P    
Sbjct: 75  LKTIPNEI-EQLQNLATLDLYENKLKVLPNEIGK-LENLKELNLSGNQLTVLP--PSIGQ 130

Query: 474 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 533
           L +L+ L L R QL   P +I+ L+ L+IL+L +N ++S+P+    L++L  LDL  N I
Sbjct: 131 LQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKI 190

Query: 534 SAL 536
             L
Sbjct: 191 KRL 193



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 49/158 (31%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           E+  LD+S   ++ LP E+ +  +L+ LIL  N++   P  I                  
Sbjct: 18  EVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEI------------------ 59

Query: 441 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 500
                                            L +L+ L L   +L+  P +I +LQ L
Sbjct: 60  -------------------------------GKLRNLETLILAENRLKTIPNEIEQLQNL 88

Query: 501 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 538
             LDL +N L+ +P     L +L EL+LS N ++ LPP
Sbjct: 89  ATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPP 126


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 155/345 (44%), Gaps = 38/345 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 415
            +P EI +   +  L L  N +  LP E+    +LQTL L+ N++
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQL 357



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 122/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N LS 
Sbjct: 355 NQLSS 359



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 42/331 (12%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 391 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 450
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 451 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 509
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 510 LQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L  +P+    L +L  L L  N ++ LP E+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 381 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 440
           ++  LDLSR  ++ LP E+    +LQ L L  N++   P  I   L +L  L L +N L 
Sbjct: 47  DVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEI-EQLKNLQLLYLRSNRLT 105

Query: 441 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 499
            +P +  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ 
Sbjct: 106 TLPKE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 500 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 540
           L+ LDLS N L ++P   + L +L  L LS+N  +  P E+
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 164/333 (49%), Gaps = 19/333 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L L QNR+  +P +I
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C +L E  +  N L  LP  +GKL KL  L+   N+L    KE     C   L+V  +
Sbjct: 286 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGC-CSLTVFCV 344

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            NN L+ +P E+ +   L  L + GN LR L  SL      AL       L +N+     
Sbjct: 345 RNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTLKLKALW------LSDNQ----- 393

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
              + L+T  T    T+ E  L  + L  +PSE
Sbjct: 394 --SQPLLTFQTDTDHTTGEKILTCVLLPQMPSE 424



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 184/426 (43%), Gaps = 74/426 (17%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL  VP E+Y+             A  L++L+L  N + +L E    L  L  L +S N+
Sbjct: 23  SLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNE 70

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  LP  I     L  LDVS N I +IP+ I    AL   D S N L  LP S     NL
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +    ++  + SLPE++ +   ++ L++                         +NLL  +
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELR------------------------ENLLTYL 166

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L    
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSL---- 222

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                    C          LD+S N L  LP EI  +T+L  L+++ N L T+   +  
Sbjct: 223 --------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGK 264

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
               ++LK  ++RL   +  EA    E+L            EL L    L  +P  I + 
Sbjct: 265 LKKLSILKLDQNRL--TQLPEAIGDCENLT-----------ELVLTENRLLTLPKSIGKL 311

Query: 380 GEITKLDLSRNSIQELPPELS--SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 437
            +++ L+  RN +  LP E++   C SL    +  N++   P  +  ++  L  L +  N
Sbjct: 312 KKLSNLNADRNKLVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEVSQAM-ELHVLDVAGN 370

Query: 438 PLRQVP 443
            LR +P
Sbjct: 371 RLRHLP 376



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 138/242 (57%), Gaps = 3/242 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+  +L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 IS--GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
           ++  GCCSL  F + NN L+ +P+E+ +  +L  LD+  N+L+   +    L+L  L LS
Sbjct: 331 VADLGCCSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTLKLKALWLS 390

Query: 284 NN 285
           +N
Sbjct: 391 DN 392



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 63/289 (21%)

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C   + V+D  + SL  +P EI +   +L +LLL  N LR L           L+K  + 
Sbjct: 10  CNRHVEVIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQ-----LVKLRKL 64

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L +NE                               +  +P EI    ++ +LD+SRN 
Sbjct: 65  GLSDNE-------------------------------IQRLPPEIANFMQLVELDVSRND 93

Query: 392 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS------- 444
           I E+P  +S C +LQ    S N +   P++    L +L+CL +++  L+ +P        
Sbjct: 94  IPEIPESISFCKALQVADFSGNPLTRLPES-FPELQNLTCLSVNDISLQSLPENIGNLYN 152

Query: 445 ---------------DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 488
                          D    +  L+ LDL  N I +LPE+    +L HL++L+L   QL 
Sbjct: 153 LASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES--IGALLHLKDLWLDGNQLS 210

Query: 489 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 537
           E P +I  L+ L  LD+S+N L+ +PE    LTSLT+L +S N +  +P
Sbjct: 211 ELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 158/362 (43%), Gaps = 21/362 (5%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 424
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL  L++S+N ++  PD I  
Sbjct: 205 DGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI-G 263

Query: 425 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 483
            L  LS LKLD N L Q+P +   D   L  L L+ N + +LP++     L  L  L   
Sbjct: 264 KLKKLSILKLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKS--IGKLKKLSNLNAD 320

Query: 484 RMQLREAPTDILRLQ--QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELV 541
           R +L   P ++  L    L +  +  N L  IP        L  LD++ N +  LP  L 
Sbjct: 321 RNKLVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLT 380

Query: 542 SV 543
           ++
Sbjct: 381 TL 382



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 476 HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 534
           H++ +  R   L   P +I R  + L  L L  N L+ +PE F  L  L +L LSDN I 
Sbjct: 13  HVEVIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 535 ALPPELVSV 543
            LPPE+ + 
Sbjct: 73  RLPPEIANF 81


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.131    0.367 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,052,156,992
Number of Sequences: 23463169
Number of extensions: 327498450
Number of successful extensions: 1452570
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15614
Number of HSP's successfully gapped in prelim test: 24181
Number of HSP's that attempted gapping in prelim test: 751853
Number of HSP's gapped (non-prelim): 271338
length of query: 543
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 395
effective length of database: 8,886,646,355
effective search space: 3510225310225
effective search space used: 3510225310225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)