BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009124
(543 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/549 (69%), Positives = 426/549 (77%), Gaps = 30/549 (5%)
Query: 10 FRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASISATRPRA 69
R+ LGA+KDTTTVSLAKVNSDYKELDIAIVKATNHVERP+KE++IRA+F +ISATRPRA
Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYKELDIAIVKATNHVERPSKERYIRAIFMAISATRPRA 70
Query: 70 DVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHMLNMAHF 128
DVAYCIHALA+RLS+THNW VALKTLIVIHRALREVD TFHEEVINY RSRSHMLNM+HF
Sbjct: 71 DVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSHF 130
Query: 129 KDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEHLPALQL 188
KDDS PNAW YSAWVR YALFLEERLECFRVLKYD+E D PRTKDLDT +LLE LPALQ
Sbjct: 131 KDDSGPNAWAYSAWVRFYALFLEERLECFRVLKYDVEVDPPRTKDLDTPDLLEQLPALQE 190
Query: 189 LLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKA 248
LLFRVL CQP+GAAV N +IQLALS+V SESTKIYQA++DG NLVDKFF+MQR+DA+KA
Sbjct: 191 LLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVDKFFDMQRNDAVKA 250
Query: 249 LDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEEYVKEAPRGSTFR 308
LD+YRRA +QA RLSEF+EVCKS+++GRGERFIKIEQPP SFLQAMEEYVKEAP + +
Sbjct: 251 LDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEEYVKEAPLAAGVK 310
Query: 309 KDQTVDNKVDAPKEMMAIEYKKTPEVEEAKPPSPPPPEPVKVEA--PVVEPPDLLGLDDP 366
K+Q V+ K+ APKE++AIEY+ P+V E KP S PEPVK EA PV + PDLL +DDP
Sbjct: 311 KEQVVE-KLTAPKEILAIEYEIPPKVVEEKPAS---PEPVKAEAEKPVEKQPDLLSMDDP 366
Query: 367 LPVASELDEKNALALAIVP--VEQPTSVAP-TQGNGTAGWELALVTAPSSNENATAASKL 423
P+ SEL+EKNALALAIVP VEQP S T GN T GWELALVTAPSSNE A A SKL
Sbjct: 367 APMVSELEEKNALALAIVPVSVEQPHSTTDFTNGNST-GWELALVTAPSSNEGAAADSKL 425
Query: 424 AGGLDKLTLDSLYDDALR-RNSQNASYSTWGPQPIAGPTMQPNGHDPFYASGMVSAPHSV 482
AGGLDKLTLDSLY+DA+R QN SY+ W P+ M H PFYAS V+AP
Sbjct: 426 AGGLDKLTLDSLYEDAIRVSQQQNRSYNPWEQNPVHNGHMM---HQPFYASNGVAAPQPF 482
Query: 483 QMAAMANQQHAFMLQQQQQQQMMM--------MAPQQTANPFANPYAANVHPYGSGMPVQ 534
Q MANQ H Q Q MMM Q NPF NP+ +N +P Q
Sbjct: 483 Q---MANQNHQTFGYQHQNAGMMMGPVQQPYQQQQQNMNNPFGNPFVSNGNPQQP----Q 535
Query: 535 AYNPYTGLM 543
YNPY M
Sbjct: 536 GYNPYPRYM 544
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/597 (48%), Positives = 361/597 (60%), Gaps = 85/597 (14%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASISA 64
GT +S+RKA GALKD+T V L +VNS+Y +LD+AIVKATNHVE P K++H+R +FA+ S
Sbjct: 2 GTLQSWRKAYGALKDSTKVGLVRVNSEYADLDVAIVKATNHVECPPKDRHLRKIFAATSV 61
Query: 65 TRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHML 123
TR RADVAYCIHAL++RL KT NW VALKTLIVIHR LRE DPTF EE++N+ + R +L
Sbjct: 62 TRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQ-RGRIL 120
Query: 124 NMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDR------------PRT 171
+++FKDDSSP AWD SAWVR+YALFLEERLECFRVLKYD E +R RT
Sbjct: 121 QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSRT 180
Query: 172 KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTV 231
+DLD ELLE LPALQ LL+R++GC+P+GAA HN VIQ AL+LV ES K+Y AI+DG +
Sbjct: 181 RDLDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKVYCAINDGII 240
Query: 232 NLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFL 291
NL+DKFFEM +H+A+ +L+IY+RAGQQA LS+FYE CK L++ R +F + +PP SFL
Sbjct: 241 NLIDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFL 300
Query: 292 QAMEEYVKEAPRGSTFRKDQTVDNKVDAPKEMMAIEYKKTPEV--EEAKPPSP-----PP 344
MEEY+KEAPR VD P E + + Y+ + E+ +P P
Sbjct: 301 TTMEEYIKEAPR------------VVDVPAEPLLLTYRPDDGLTTEDTEPSHEEREMLPS 348
Query: 345 PEPVKVEAP---------------VVEPPDLLGLDDPLPVASELDEKNALALAIVPVE-- 387
+ V V ++ DL GL+ P S ++++NALALAIV +
Sbjct: 349 DDVVVVSEETEPSPPPPPSANAQNFIDTDDLWGLNTGAPDTSVIEDQNALALAIVSTDAD 408
Query: 388 -------QPTSVAPTQGNGTAGWELALVTAPSSNENATAASKLAGGLDKLTLDSLYDDAL 440
QP + PT GWELALVTAPSS+ +A+ KLAGGLD LTL SLYDD
Sbjct: 409 PPTPHFGQPNNYDPT------GWELALVTAPSSDISASTERKLAGGLDTLTLSSLYDDGA 462
Query: 441 RRNSQNASYSTWGPQPIAGPTMQPNGHDPFYASGMVSAPHSVQMAA---MANQQHAFMLQ 497
SQ Y P P A HDPF AS +AP Q A Q + Q
Sbjct: 463 YIASQRPVYGAPAPNPFA-------SHDPF-ASSNGTAPPPQQQAVNNPFGAYQQTYQHQ 514
Query: 498 QQQQQQMMMMAPQQTANPFA-------NPYAA--NVHPYGSGMPVQAYNPY--TGLM 543
Q Q P +NPF NP + N YG Q NP+ TGL+
Sbjct: 515 PQPTYQHQSNPPTNNSNPFGDFGEFPVNPVSQQPNTSGYGDFSVNQHNNPFRSTGLI 571
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 274/534 (51%), Positives = 340/534 (63%), Gaps = 69/534 (12%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASISA 64
GT SFRKA GALKDTTTV LAKVNS++K+LDIAIVKATNHVE P KE+H+R +F++ S
Sbjct: 2 GTFTSFRKAYGALKDTTTVGLAKVNSEFKDLDIAIVKATNHVESPPKERHVRKIFSATSV 61
Query: 65 TRPRADVAYCIHALAKRLSKTHNWV-ALKTLIVIHRALREVDPTFHEEVINYGRSRSHML 123
+PRADVAYCIHAL+KRLSKT NWV A+K LIVIHR LRE DPTF EE++NY R H+L
Sbjct: 62 IQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRR-HIL 120
Query: 124 NMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDR-----------PRTK 172
+++FKDD+SP AWD SAWVR+YALFLEERLEC+RVLKYDIE +R RT+
Sbjct: 121 RISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHRTR 180
Query: 173 DLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVN 232
L +LLE LPALQ LL+R++GCQP+GAA N++IQ AL+LV ES KIY AI+DG +N
Sbjct: 181 MLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIIN 240
Query: 233 LVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQ 292
LVD FFEM RHDA+KAL+IY+RAGQQAE L+EFY+ CK L++ R +F + QPP SFL
Sbjct: 241 LVDMFFEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFLA 300
Query: 293 AMEEYVKEAPRGSTFRKD--------------------------QTVDNKVDAPKEMMAI 326
MEEY+KEAP+ + +K Q + + D P
Sbjct: 301 TMEEYIKEAPQSGSVQKKLEYQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLIEEEE 360
Query: 327 EYKKTPEVEEAKPPSPPPPEPVKVEAPVVEPPDLLGLDDPLPVASELDEKNALALAIVPV 386
E K E PSP +++ DLLGL + P A+E+++ NA +LAI P
Sbjct: 361 EEPKEEIEVEEAKPSP-----------LIDTDDLLGLHEINPKAAEIEQNNAFSLAIYPP 409
Query: 387 EQPTSVAPTQG-----NGTAGWELALVTAPSSNENA-----TAASKLAGGLDKLTLDSLY 436
TS AP+ G +GWELALVT ++N N A+KL GG D L LDSLY
Sbjct: 410 GHETS-APSNSLSLIEAGGSGWELALVTPQNNNNNNNNPRPVIATKLGGGFDNLLLDSLY 468
Query: 437 -DDALRRNSQ--NASY---STWGPQPIAGPTMQPNG--HDPFYASGMVSAPHSV 482
DD RR Q NA Y +T P +A P G DPF S ++ P +V
Sbjct: 469 EDDTARRQIQLTNAGYGFGATAIPGALASSNPNPFGVQQDPFAMSNNMAPPTNV 522
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/543 (49%), Positives = 346/543 (63%), Gaps = 81/543 (14%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASISA 64
T SFRKA+GA+KD+TTVS+AKVNS++K+LD+AIVKATNHVE KE+HIR +F++ S
Sbjct: 2 ATFNSFRKAVGAIKDSTTVSIAKVNSEFKDLDVAIVKATNHVESAPKERHIRRIFSATSV 61
Query: 65 TRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHML 123
+PRADVAYCIHALAKRLSKT NW VA+K LIVIHR LRE DPTF EE++NY R H+L
Sbjct: 62 VQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSH-RGHIL 120
Query: 124 NMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRP-------------- 169
+++FKDD+SP AWD SAW+R+YALFLEERLEC+RVLKYDIE +R
Sbjct: 121 RISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFN 180
Query: 170 -----RTKDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQ 224
RT+ L ELLE LPALQ LL+R++GCQP+G+A N++IQ AL+LV ES KIY
Sbjct: 181 ASQTYRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYC 240
Query: 225 AISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIE 284
AI+DG +NLVD FFEM RHDA+KAL+IY+RAGQQAE L++FYE CK L++ R +F +
Sbjct: 241 AINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLR 300
Query: 285 QPPASFLQAMEEYVKEAPRGSTFRK------------------------------DQTVD 314
QPP SFL ME+Y+KEAP+ + +K +Q +
Sbjct: 301 QPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADNQKEN 360
Query: 315 NKVDAPKEMMAIEYKKTPEVEEAKPPSPPPPEPVKVEAPVVEPPDLLGLDDPLPVASELD 374
++ D P E ++ E E+AKP + +++ DLLGL++ P A+E++
Sbjct: 361 SEGDQPLIEEEEEDQEKIEEEDAKP------------SFLIDTDDLLGLNEINPKAAEIE 408
Query: 375 EKNALALAIVP----VEQPTSVAPTQGNGTAGWELALVT----APSSNENATAASKLAGG 426
++NALALAI P P+++ G +GWELALVT ++N +KLAGG
Sbjct: 409 DRNALALAIYPPGHEAPGPSNILSLIETGGSGWELALVTPQNNNNNNNPRPAPNTKLAGG 468
Query: 427 LDKLTLDSLY-DDALRRNSQ--NASYSTWGPQPIAGPTMQPN----GHDPFYASGMVSAP 479
D L LDSLY DD+ RR Q NA Y G A P PN DPF S ++ P
Sbjct: 469 FDNLLLDSLYEDDSARRQIQLTNAGYGHGGIDTTAAP---PNPFQMQQDPFAMSNNIAPP 525
Query: 480 HSV 482
+V
Sbjct: 526 TNV 528
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/516 (49%), Positives = 334/516 (64%), Gaps = 54/516 (10%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASISA 64
GT +S+R+A GALKDTT V L +VNSDY ELD+AIVKATNHVE P K++H+R +F + SA
Sbjct: 2 GTLQSWRRAYGALKDTTKVGLVRVNSDYAELDVAIVKATNHVECPPKDRHLRKIFLATSA 61
Query: 65 TRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHML 123
RPRADVAYCIHAL++RL KT NW VALK L+VIHR LR+ DPTF EE++N+ + + ++
Sbjct: 62 IRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQ-KGRIM 120
Query: 124 NMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDR------------PRT 171
+++FKDDSSP AWD S WVR+YALFLEERLECFRVLKYDIE +R +T
Sbjct: 121 QISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEAERLPKVSPGQEKGYSKT 180
Query: 172 KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTV 231
+DLD +LLE LPALQ LL R++GC+P+GAA HN +IQ ALSLV ES K+Y AI++G +
Sbjct: 181 RDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGII 240
Query: 232 NLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFL 291
NLV+KFFEM RH+A+KAL+IY+RAG QA LS FYEVCK L++ R +F + +PP SFL
Sbjct: 241 NLVEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFL 300
Query: 292 QAMEEYVKEAPRGS---------TFRKDQTV----------DNKVDAPKEMMAIEYKKTP 332
MEEY+++AP+ T+ D + +++ +P + + ++T
Sbjct: 301 TTMEEYMRDAPQMVDVTSGPLLLTYTPDDGLTSEDVGPSHEEHETSSPSDSAVVPSEET- 359
Query: 333 EVEEAKPPSPPPPEPVKVEAP--VVEPPDLLGLDDPLPVASELDEKNALALAIVPVE--- 387
++ PPS VE P ++ DLLGL D P + ++NALALA+V +
Sbjct: 360 QLSSQSPPS--------VETPQNFIDTDDLLGLHDDTPDPLAILDQNALALALVSNDVDS 411
Query: 388 QPTSVAPTQGNGTAGWELALVTAPSSNENATAASKLAGGLDKLTLDSLYDDALRRNSQNA 447
P S + +GWELALVT PS++ +A +LAGGLD LTL+SLYDD R +Q
Sbjct: 412 SPFSFGQARDLDPSGWELALVTTPSNDISAATERQLAGGLDTLTLNSLYDDGALRAAQQP 471
Query: 448 SYSTWGPQPIAGPTMQPNGHDPFYASGMVSAPHSVQ 483
+Y P D F S VS P +V
Sbjct: 472 AYGVPASNPF-------EVQDLFAFSDSVSPPSAVN 500
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 284/583 (48%), Gaps = 95/583 (16%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKVN---SDYKELDIAIVKATNHVERPAKEKHIRAVFAS 61
G+ K F++A+GA+KD T+V LAKVN + ELD+AIVKAT H E PA+EK+IR + +
Sbjct: 2 GSSK-FKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILSL 60
Query: 62 ISATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRS 120
S +R + C+ L++RL+KT W VALKTLI+I R L E D + +E+ R +
Sbjct: 61 TSYSRSYINA--CVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGT 118
Query: 121 HMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVL-------------KYDIETD 167
+LNM+ F+D S N+WDYSA+VR+YAL+L+ERL+ FR+ + D E
Sbjct: 119 RLLNMSDFRDVSRSNSWDYSAFVRTYALYLDERLD-FRMQARHGKRGVYCVGGEADEEEQ 177
Query: 168 RPRTKDLDTAELLEHLPA--------------LQLLLFRVLGCQPQGAAVHNFVIQLALS 213
DL TA ++ P LQ LL R L C+P G A +N V+ +AL
Sbjct: 178 DQAAADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIVALY 237
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
+ ES +IY +++ L+++F E+ D++K DI+ R +Q E L +FY CK++
Sbjct: 238 PIVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMG 297
Query: 274 IGRGERFIKIEQPPASFLQAMEEYVKEAPRGSTFRKDQTVDNKVDAPKEMMAIEYKKTPE 333
I R + +IE+ L M+E++++ ++ ++V ++ D + +T E
Sbjct: 298 IARSSEYPEIEKITQKKLDLMDEFIRDKSALEHTKQSKSVKSEADEDD-----DEARTEE 352
Query: 334 VEEAKP--------PSPPP------------PEPVKVEAPVVEPPDLLGLDDP-LPVASE 372
V E + P PPP E V +E E DLL L + A +
Sbjct: 353 VNEEQEDMNAIKALPEPPPKEEDDVKPEEEAKEEVIIEKKQEEMGDLLDLGNTNGGEAGQ 412
Query: 373 LDEKNALALAIVPVEQPTSVAPTQG-----NGTAGWELALVTAPSSNENATAASKLAGGL 427
+ ALAL P + G + +A WE ALV ++ + S+L GG
Sbjct: 413 AGDSLALALFDGPYASGSGSESGPGWEAFKDDSADWETALVQ--TATNLSGQKSELGGGF 470
Query: 428 DKLTLDSLY-----DDALRRN-----SQNASYSTWG------------PQPI-----AGP 460
D L L+ +Y + A++ + S +AS +G P P AG
Sbjct: 471 DMLLLNGMYQHGAVNAAVKTSTAYGASGSASSMAFGSAGRPAATMLALPAPSTANGNAGN 530
Query: 461 TMQPNGHDPFYASGMVSAPHSVQMAAMANQQHAFMLQQQQQQQ 503
P DPF AS V+ P VQM M +Q M +Q Q
Sbjct: 531 INSPVPMDPFAASLEVAPPAYVQMNDMEKKQRMLMEEQMMWDQ 573
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 295/644 (45%), Gaps = 125/644 (19%)
Query: 9 SFRKALGALKDTTTVSLAKVNSDYK-ELDIAIVKATNHVERPAKEKHIRAVFASISATRP 67
S RKA+G +KD T++ +AKV S+ +L++AIVKAT+H + + +K+IR + + S +R
Sbjct: 4 SMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSLSR- 62
Query: 68 RADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHMLNMA 126
V C+ ++++RL KT +W VALK L+++HR L E DP F EE++ R + +LNM+
Sbjct: 63 -GYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMS 121
Query: 127 HFKDDSSPNAWDYSAWVRSYALFLEERLEC------------------------FRVLKY 162
F+D++ ++WD+SA+VR+YA +L++RLE + +
Sbjct: 122 DFRDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRD 181
Query: 163 DIETDRPRTKDLDTAE----------------------------LLEHLPA--------L 186
D + PRT D +T L E P L
Sbjct: 182 DFRSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGHL 241
Query: 187 QLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDAL 246
Q LL R L C+P G A ++ +I +A+ V ES ++Y I + L+DKFF+M+ D +
Sbjct: 242 QRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCV 301
Query: 247 KALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEEYVKE-APRGS 305
KA D Y A +Q + L FY CK + R + ++++ + L+ +EE+V++ A R
Sbjct: 302 KAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRAK 361
Query: 306 TFRKDQTVDNKVDAPKEMMAI---EYKKTPEVEEAKPPSPPPPEPVKVEAPVVEPPDLLG 362
+ + + AP + E K P E PP PP PEP + V + DL+
Sbjct: 362 SPERKEIEAPPAPAPPVEEPVDMNEIKALPPPENHTPPPPPAPEPKPQQPQVTD--DLVN 419
Query: 363 L--DDPLPVASELDEKNALALAIV---PVEQPTSVA-PTQGNGTAGW------------E 404
L DD S D+ N ALA+ P A + N T+ W E
Sbjct: 420 LREDD----VSGDDQGNKFALALFAGPPANNGKWEAFSSDNNVTSAWQNPAAELGKADWE 475
Query: 405 LALVTAPSSNENATAASKLAGGLDKLTLDSLYDDALRRNSQNASYSTWGPQ-----PIAG 459
LALV S+ E+ AA + GGLD L L+ +YD R + S T G P+ G
Sbjct: 476 LALVETASNLEHQKAA--MGGGLDPLLLNGMYDQGAVRQHVSTSELTGGSSSSVALPLPG 533
Query: 460 P-------------TMQPNGHDPFYASGMVSAPHSVQMAAMANQQHAFMLQ--------- 497
T+Q DPF AS + P VQMA M +Q+ +
Sbjct: 534 KVNSHILALPAPDGTVQKVNQDPFAASLTIPPPSYVQMAEMDKKQYLLTQEQQLWQQYQQ 593
Query: 498 --QQQQQQMMMMAPQQTANPFANPYAANVHPYGSGMPVQAYNPY 539
+ Q + M QTA P+ P + P S M NPY
Sbjct: 594 EGMRGQASLAKMNTAQTAMPYGMPPVNGMGP--SPMGYYYNNPY 635
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 170/574 (29%), Positives = 275/574 (47%), Gaps = 85/574 (14%)
Query: 5 GTQKSFRKALGALKDTTTVSLAKV---NSDYKELDIAIVKATNHVERPAKEKHIRAVFAS 61
G+ K ++A+GA+KD T+V LAKV +S EL+IA+VKAT H + PA++K+IR +
Sbjct: 2 GSSK-LKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCL 60
Query: 62 ISATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRS 120
S +R V+ C+ L++RL+KT NW VALKTLI+I R L + D + +E+ R +
Sbjct: 61 TSYSRNY--VSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGT 118
Query: 121 HMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLE------------------------- 155
+LNM+ F+D S ++WDYSA+VR+YAL+L+ERL+
Sbjct: 119 RLLNMSDFRDASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKKKSGGGGGGDGDSGEE 178
Query: 156 -CFRVLKYDIETDRPRTK-----DLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQ 209
R DI + K ++ T ++ + LQ LL R L C+P G A +N V+
Sbjct: 179 DDHRGTSNDIRSKAIVVKSKPVAEMKTEKIFNRVQHLQQLLDRFLACRPTGNAKNNRVVI 238
Query: 210 LALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVC 269
+A+ + ES ++Y I++ L+++F E+ HD++K +I+ R +Q + L FY C
Sbjct: 239 VAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWC 298
Query: 270 KSLDIGRGERFIKIEQPPASFLQAMEEYVKEAPRGSTFRKDQTVDNKVDAPKEMMAIEYK 329
K++ + R + ++E+ L M+E++++ + + + +E EY
Sbjct: 299 KNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEEESKTEYI 358
Query: 330 KTPEVEEAKPPSPPPP-------------EPVKVEAPVV---EPPDLLGLDDPLPV-ASE 372
+ + + + P P VE V + DLL L D V A
Sbjct: 359 QENQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEVVSRQDQEGDLLDLTDEAGVTAGT 418
Query: 373 LDEKNALALAIVPVEQPTSVAPTQ---GNGTAGWELALVTAPSSNENATAASKLAGGLDK 429
+ + ALAL V ++ P + +A WE LV S+ + S+L GG D
Sbjct: 419 VGDSLALALFDGVVGTESASGPGWEAFNDNSADWETDLVR--SATRLSGQKSELGGGFDT 476
Query: 430 LTLDSLY-----DDALRRNS--------QNASYSTWG-----------PQPIA-GPTMQP 464
L LD +Y + A++ ++ + ++ + G P P A G P
Sbjct: 477 LLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSAGSPAASMLALPAPPPTANGNRNSP 536
Query: 465 NGHDPFYASGMVSAPHSVQMAAMANQQHAFMLQQ 498
DPF AS V+ P VQM M +Q M +Q
Sbjct: 537 VMVDPFAASLEVAPPAYVQMNDMEKKQRLLMEEQ 570
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 181/326 (55%), Gaps = 37/326 (11%)
Query: 10 FRKALGALKDTTTVSLAKV------NSDYKELDIAIVKATNHVER-PAKEKHIRAVFASI 62
+KA+GA+KD T++SLAKV D L++AI+KAT+H E P ++ + + I
Sbjct: 5 LKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGII 64
Query: 63 SATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSH 121
S+ + A A C A+ +R+ +T NW VALK+L+++ R ++ DP F EV++ + +
Sbjct: 65 SSKKSHA--ASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGAK 122
Query: 122 MLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYD------------------ 163
+LN++ F+DDS+ WD++A+VR++AL+L+ERL+CF K
Sbjct: 123 ILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYTNREQTGRISTNSTT 182
Query: 164 ---------IETDRPRTKDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSL 214
I++ P +D+ LL+ + Q LL R + +P G A N +++++L
Sbjct: 183 RSRFNPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMSLYA 242
Query: 215 VASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDI 274
V ES +Y+ ISDG L+D FF +Q + A RA +Q E L+ FY++ KS+ I
Sbjct: 243 VMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSIGI 302
Query: 275 GRGERFIKIEQPPASFLQAMEEYVKE 300
GR + I++ L+ ++E++K+
Sbjct: 303 GRTSEYPSIQKISLELLETLQEFLKD 328
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 108/149 (72%), Gaps = 4/149 (2%)
Query: 9 SFRKALGALKDTTTVSLAKVNSDYK-ELDIAIVKATNHVERPAKEKHIRAVFASISATRP 67
S RKA+GA+KD T++ +AKV S+ +L++AIVKAT+H + PA EK+IR + S +R
Sbjct: 4 SIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTSLSR- 62
Query: 68 RADVAYCIHALAKRLSKTHNWV-ALKTLIVIHRALREVDPTFHEEVINYGRSRSHMLNMA 126
+ C+ ++++RLSKT +WV ALK L+++HR L E DP F EE++ R + MLNM+
Sbjct: 63 -GYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNMS 121
Query: 127 HFKDDSSPNAWDYSAWVRSYALFLEERLE 155
F+D++ ++WD+SA+VR+YA +L++RLE
Sbjct: 122 DFRDEAHSSSWDHSAFVRTYAGYLDQRLE 150
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 152/340 (44%), Gaps = 35/340 (10%)
Query: 186 LQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDA 245
LQ LL R L +P G A ++ +I +AL V ES K+Y I + L+DKFF+M+ D
Sbjct: 261 LQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFFDMEYSDC 320
Query: 246 LKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEEYVKE-APRG 304
+KA D Y A +Q + L FY CK + R + ++++ + L+ +EE+V++ A RG
Sbjct: 321 VKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQRITSKLLETLEEFVRDRAKRG 380
Query: 305 STFRKDQTVDNKVDAPKEMMAIEYKKTPEVEEAKPPSPPPPEPVKVEAPVVE-PPDLLGL 363
+ + + +E + + + + +PPPP + + + DL+ L
Sbjct: 381 KSPERKEIEAPPPVVEEEEPEPDMNEIKALPPPENYTPPPPPEPEPQPEKPQFTEDLVNL 440
Query: 364 DDPLPVASELDEKNALALAIVPVEQPTSVAPTQGNGT-------------AGWELALVTA 410
+ A + K ALAL P NG A WELALV
Sbjct: 441 REDEVTADDQGNKFALALFAGPPGNNGKWEAFSSNGVTSAWQNPAAEPGKADWELALVET 500
Query: 411 PSSNENATAASKLAGGLDKLTLDSLYDDALRRNSQNASYSTWGPQ-----PIAGPTMQ-- 463
S+ E TAA L GG D L L+ +YD + R + S T G P+ G T
Sbjct: 501 TSNLEKQTAA--LGGGFDNLLLNGMYDQGMVRQHVSTSQLTGGSASSVALPLPGKTNNQV 558
Query: 464 -----PNG------HDPFYASGMVSAPHSVQMAAMANQQH 492
P+G DPF AS + P VQMA M +Q+
Sbjct: 559 LALPAPDGTVEKVNQDPFAASLTIPPPSYVQMAEMEKKQY 598
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 138/265 (52%), Gaps = 13/265 (4%)
Query: 39 IVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVIH 98
+ KAT H K+KH+ + + ++ +L +R + + V K+LI H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNSSWVVVFKSLITTH 83
Query: 99 RALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFR 158
+ + E I Y SR+ + N+++F D S +D S ++R Y+ +L E+ +R
Sbjct: 84 HLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 159 VLKYDIETDRPRTKD-----LDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
+ +D T R D ++T +LL+ +P +Q + +L + N VI A
Sbjct: 140 QVAFDF-TKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ ++ +++ A ++G +NL++K+F+M+++ + LDIY++ + R+SEF +V + +
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYV 298
I RG+ + Q P+S L A+E+++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 138/265 (52%), Gaps = 13/265 (4%)
Query: 39 IVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVIH 98
+ KAT H K+KH+ + + ++ +L +R + + V K+LI H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNSSWVVVFKSLITTH 83
Query: 99 RALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFR 158
+ + E I Y SR+ + N+++F D S +D S ++R Y+ +L E+ +R
Sbjct: 84 HLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 159 VLKYDIETDRPRTKD-----LDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
+ +D T R D ++T +LL+ +P +Q + +L + N VI A
Sbjct: 140 QVAFDF-TKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ ++ +++ A ++G +NL++K+F+M+++ + LDIY++ + R+SEF +V + +
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYV 298
I RG+ + Q P+S L A+E+++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 138/265 (52%), Gaps = 13/265 (4%)
Query: 39 IVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVIH 98
+ KAT H K+KH+ + + ++ +L +R + + V K+LI H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLFERTTNSSWVVVFKSLITTH 83
Query: 99 RALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFR 158
+ + E I Y SR+ + N+++F D S +D S ++R Y+ +L E+ +R
Sbjct: 84 HLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYR 139
Query: 159 VLKYDIETDRPRTKD-----LDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
+ +D T R D ++T +LL+ +P +Q + +L + N VI A
Sbjct: 140 QVAFDF-TKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ ++ +++ A ++G +NL++K+F+M+++ + LDIY++ + R+SEF +V + +
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYV 298
I RG+ + Q P+S L A+E+++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%), Gaps = 11/266 (4%)
Query: 38 AIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVI 97
A+ KAT H K+KH+ + + + T ++ L +R + + V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLFERATNSSWVVVFKALVTT 82
Query: 98 HRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECF 157
H + +E I Y SR+ + N+++F D S + +D S ++R Y+ +L E+ +
Sbjct: 83 HHLMVHG----NERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 158 RVLKYDIETDRPRT----KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
R + +D + + + +LL+ +P LQ + +L + N VI A
Sbjct: 139 RQMAFDFARVKKGADGVMRTMAPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ + K++ +DG +NL++KFFEM++ AL+IY+R + R+SEF +V + +
Sbjct: 199 LLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYVK 299
I +G+ + Q P+S ++ +E+++
Sbjct: 259 IDKGD-IPDLTQAPSSLMETLEQHLN 283
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%), Gaps = 11/266 (4%)
Query: 38 AIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVI 97
A+ KAT H K+KH+ + + + T ++ L +R + + V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLFERATNSSWVVVFKALVTT 82
Query: 98 HRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECF 157
H + +E I Y SR+ + N+++F D S + +D S ++R Y+ +L E+ +
Sbjct: 83 HHLMVHG----NERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 158 RVLKYDIETDRPRT----KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
R + +D + + + +LL+ +P LQ + +L + N VI A
Sbjct: 139 RQMAFDFARVKKGADGVMRTMVPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ + K++ +DG +NL++KFFEM++ AL+IY+R + R+SEF +V + +
Sbjct: 199 LLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYVK 299
I +G+ + Q P+S ++ +E+++
Sbjct: 259 IDKGD-IPDLTQAPSSLMETLEQHLN 283
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 38 AIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVI 97
A+ KAT H K+KH+ + + + T ++ L +R + + V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLFERATNSSWVVVFKALVTT 82
Query: 98 HRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECF 157
H + +E I Y SR+ + N+++F D S + +D S ++R Y+ +L E+ +
Sbjct: 83 HHLMVHG----NERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSY 138
Query: 158 RVLKYDIETDRPRT----KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALS 213
R + +D + + + +LL+ +P LQ + +L + N VI A
Sbjct: 139 RQMAFDFARVKKGADGVMRTMVPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFM 198
Query: 214 LVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLD 273
L+ + K++ +DG +NL++KFFEM++ AL+IY+R + R+SEF +V +
Sbjct: 199 LLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVADEVG 258
Query: 274 IGRGERFIKIEQPPASFLQAMEEYVK 299
I +G+ + Q P+S ++ +E+++
Sbjct: 259 IDKGD-IPDLTQAPSSLMETLEQHLN 283
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 34 ELDIAIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNW-VALK 92
+L I KAT K+KH+ + + P + + L +R ++ NW V K
Sbjct: 36 QLGKTICKATTEEVMAPKKKHLDYLLHCTN--EPNVSIPSMANLLIER-TQNPNWTVVYK 92
Query: 93 TLIVIHRALREVDPTFHEEVINYGRSRSHMLNMAHFKDD-SSPNAWDYSAWVRSYALFLE 151
LI IH + + F + Y S + N+ F D +D S VR YA ++
Sbjct: 93 ALITIHNIMCYGNERFSQ----YLASCNTTFNLTAFVDKVGGAGGYDMSTHVRRYAKYIG 148
Query: 152 ERLECFRVLKYDI-ETDRPR----TKDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNF 206
E++ +R+ +D + R R + + T +LL+ +P LQ + +L + ++N
Sbjct: 149 EKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLLKTIPILQNQIDALLEFSVTTSELNNG 208
Query: 207 VIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFY 266
VI + L+ + +++ +DG +N+++K+F+M + ALD Y+ + ++++EF
Sbjct: 209 VINCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRLDKVAEFL 268
Query: 267 EVCKSLDIGRGERFIKIEQPPASFLQAMEEYV 298
V +S+ I RGE + + PAS L+A+E ++
Sbjct: 269 RVAESVGIDRGE-IPDLTRAPASLLEALEAHL 299
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 137/278 (49%), Gaps = 25/278 (8%)
Query: 38 AIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVAL-KTLIV 96
++ KAT K+KH+ + + P + + + L +R S+ NWV + K+LI
Sbjct: 27 SVCKATTEECIGPKKKHLDYLVHCTN--EPNVSIPHLANLLIER-SQNANWVVVYKSLIT 83
Query: 97 IHRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPN-----------AWDYSAWVRS 145
H + +E + Y S + N++ F D + +D S ++R
Sbjct: 84 THHLM----AYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRR 139
Query: 146 YALFLEERLECFRVLKYDI-----ETDRPRTKDLDTAELLEHLPALQLLLFRVLGCQPQG 200
YA +L E+ +R + +D + + ++ +LL+ LP LQ L +L Q
Sbjct: 140 YAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDCQS 199
Query: 201 AAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAE 260
+ N VI ++ L+ + +++ +DG +NL++K+F+M + A ALD+Y++ + +
Sbjct: 200 NDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMD 259
Query: 261 RLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEEYV 298
R+ EF +V +++ I +G+ + + P+S L A+E+++
Sbjct: 260 RVGEFLKVAENVGIDKGD-IPDLTKAPSSLLDALEQHL 296
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 21/300 (7%)
Query: 38 AIVKATNHVERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNW-VALKTLIV 96
A+ KAT K KH+ + + T + I AL +RL K +W + KTLIV
Sbjct: 13 AVKKATKVKLAAPKYKHVEIILEA--TTEDPETLENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 97 IHRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLEC 156
H L+E P I R +L + + + + +Y+ FL ER +
Sbjct: 70 FHVMLKEGAPN---TTIVALSQRPRILEVL-----KASSLLAQGKNIYNYSRFLSERAKQ 121
Query: 157 FRVLKYDIET--DRPRTK----DLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQL 210
+ L D D P+ K L+ LL ++ +Q L R++ CQ + N +
Sbjct: 122 YGRLGVDYAQVGDAPKKKIREMKLENG-LLRNVEGIQAQLRRLIKCQFVAEEIDNDIAIT 180
Query: 211 ALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCK 270
A L+ + +++A++ G +N+++ +FEM HDA ++L IY+ Q E + + +
Sbjct: 181 AFRLLVGDLLVLFKAVNIGVINVLEHYFEMGHHDAAQSLRIYKTFVNQTEDIINYLSTAR 240
Query: 271 SLDIGRGERFIKIEQPPASFLQAMEEYVKEAPRGSTFRKDQTVDNKVDAPKEMMAIEYKK 330
SL+ I+ P S ++EEY+ + P RK Q + NK +P E AI +K
Sbjct: 241 SLEFVTKFPVPNIKHAPISLTASLEEYLND-PDFEENRK-QYLQNKSGSPVEETAILNRK 298
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 26/279 (9%)
Query: 10 FRKALGALKDTTTVSLAKVNSDYKE-----LDIAIVKATNHVERPAKEKHIRAVFASISA 64
FR+ LG KD ++ A V +Y E +++A+V+AT+H + P +K + + +S
Sbjct: 9 FRQVLGLAKDHASIGRAIVQ-NYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFLVSN 67
Query: 65 TRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHM- 122
T P + + +++RL+KT + VA KTL++ HR LR + E+ ++ + H+
Sbjct: 68 T-P-GSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSI-EQQLHIAHTSGHLQ 124
Query: 123 LNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFR--------VLKYDIETDRPRTKDL 174
+ + F ++ ++++Y +L+ER+ V+ + R + K +
Sbjct: 125 IGCSWFMMSLDSRSF---VFLQNYVAYLQERVGWIINQAGKLEPVMSGGTKFSRYKEKSM 181
Query: 175 DTAELLEH-LPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNL 233
D L+ H LP Q + +VL C P A + ++Q A + ES ++Y SDG L
Sbjct: 182 D---LVFHILPKCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTYSDGMTAL 238
Query: 234 VDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSL 272
V F++ R A + R+A QQ + L Y+ C+
Sbjct: 239 VSMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGF 277
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 22/300 (7%)
Query: 8 KSFRKALGALKDTTTVSLA----KVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASIS 63
K +++A GALKD T+ K + +LD AI+ AT+H + + V+ I
Sbjct: 2 KLWKRASGALKDRKTLFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIR 61
Query: 64 ATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSHM 122
++ A++ +HAL+ R+++T +W VALK L+++H L +V + R
Sbjct: 62 SSP--ANLKPLVHALSSRVNRTRSWIVALKALMLVHGVL-------CCKVTSLQEIRRLP 112
Query: 123 LNMAHFKDDSS--PNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRPRTKDLDTA-EL 179
+++ F D S W ++A++R+Y FL++ + D R + LD+ +
Sbjct: 113 FDLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQ----YSFFLSDQIRRRHKKPQLDSVNQE 168
Query: 180 LEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDKFF- 238
LE + LQ LL +L +P + +I A+ V E IY I L+ K
Sbjct: 169 LERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYGRICSAIAKLLIKIHP 228
Query: 239 EMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEEYV 298
+ +A+ AL I ++A Q E L+ ++E CK + K P ++A+E+ +
Sbjct: 229 AAGKAEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIPKFVTIPEEDIKAIEKVI 288
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 28/277 (10%)
Query: 39 IVKATNHVER-PAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVI 97
+VK ++ P K+K++ + + S+ R ++ HAL RLS T + K LIV+
Sbjct: 8 LVKGATKIKMAPPKQKYVDPILSGTSSARGLQEIT---HALDIRLSDTAWTIVYKALIVL 64
Query: 98 HRALR--EVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAW---DYSAWVRSYALFLEE 152
H ++ E D T R SH L++ + S W D A R Y +L+
Sbjct: 65 HLMIQQGEKDVTL--------RHYSHNLDVFQLRKISHTTKWSSNDMRALQR-YDEYLKT 115
Query: 153 RLECFRVLKYDIETDRPRT------KDLDTAELLEHLPALQLLLFRVLGCQPQGAAVHNF 206
R E + L D D + L E L+H+ +L++ + ++ + + + N
Sbjct: 116 RCEEYGRLGMDHLRDNYSSLKLGSKNQLSMDEELDHVESLEIQINALIRNKYSVSDLENH 175
Query: 207 VIQLALSLVASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFY 266
++ A L+ + +Y A+++G + L++ FFE+ A + LD+Y+ E + +
Sbjct: 176 LLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLDLYKDFVDMTEYVVRYL 235
Query: 267 EVCKSLDIGRGERFIKIEQPPASFLQAMEEYVKEAPR 303
++ K++ G + I+ + ++EE+++E +
Sbjct: 236 KIGKAV----GLKIPVIKHITTKLINSLEEHLREETK 268
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 5 GTQKSFRKALGALKDTTTVS---LAKVNSDYKELD--IAIVKATNHV-ERPAKEKHIRAV 58
G SF +G +KD + S L N+ K L +++++AT H P +H+ +
Sbjct: 2 GRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVI 61
Query: 59 FASISATRPRADVAYCIHALAKRLSKTHN-WVALKTLIVIHRALREVDPTFHEEVINY-- 115
++ T RA + + ++ +RL T + VALK+LI+IH ++ +++ +
Sbjct: 62 LSA--GTGSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPA 119
Query: 116 --GRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRPRTKD 173
GR + L ++ F+D+ SP W+ S+WVR YAL+LE L R++ + I +
Sbjct: 120 SGGR---NYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISSTSSTIHK 176
Query: 174 LDTAELLEHLPALQLL 189
+ E++ L LL
Sbjct: 177 EEYEEMVSSLTNSDLL 192
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 138/302 (45%), Gaps = 22/302 (7%)
Query: 8 KSFRKALGALKDTTT---VSLAKVNSDYKELDI--AIVKATNHVERPAKEKHIRAVFASI 62
K +++A A+KD + V ++ NS Y+ D+ AI+KAT+H + + V+ I
Sbjct: 2 KLWKRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKWI 61
Query: 63 SATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIHRALREVDPTFHEEVINYGRSRSH 121
++ P ++ ++A++ R++ T +W VALK+L+++H L P+ G R
Sbjct: 62 RSS-P-LNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCKVPSV------VGEFRRL 113
Query: 122 MLNMAHFKDDSS--PNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRPRT--KDLDTA 177
+++ F D S W ++ +VR+Y FL + + + R+ K D+
Sbjct: 114 PFDLSDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFLSDQIHRLRGNNRRSLEKTSDSV 173
Query: 178 -ELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVDK 236
+ LE + LQ LL +L +P + +I A+ + ES IY I + ++
Sbjct: 174 IQELERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESINIYGRICGAVMKVLPL 233
Query: 237 FFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQAMEE 296
+ +A L I + Q E L ++E CK + + + P ++A+E+
Sbjct: 234 ---AGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNAREIPQFVRIPEEEVEAIEK 290
Query: 297 YV 298
+
Sbjct: 291 MI 292
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 115/265 (43%), Gaps = 24/265 (9%)
Query: 49 PAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNWVALKTLIVIHRALREVDPTF 108
P K+K++ + T D + L R++ T + K+L+V+H +RE
Sbjct: 18 PPKQKYLDPILL---GTSNEEDFYEIVKGLDSRINDTAWTIVYKSLLVVHLMIREGSK-- 72
Query: 109 HEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDR 168
+ + Y ++ + + + + D A R Y +L+ R F +K D D
Sbjct: 73 -DVALRYYSRNLEFFDIENIRGSNGSASGDMRALDR-YDNYLKVRCREFGKIKKDYVRDG 130
Query: 169 PRTKDLDTAEL-------------LEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLV 215
RT L++ L+H+ +L++ + ++ + + N +I L+
Sbjct: 131 YRTLKLNSGNYGSSRNKQHSINIALDHVESLEVQIQALIKNKYTQYDLSNELIIFGFKLL 190
Query: 216 ASESTKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIG 275
+ +Y A+++G + L++ FFE+ H+A + LD+Y+ E + + + K+
Sbjct: 191 IQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYKTFVDLTEHVVRYLKSGKT---- 246
Query: 276 RGERFIKIEQPPASFLQAMEEYVKE 300
G + I+ ++++EE++ E
Sbjct: 247 AGLKIPVIKHITTKLVRSLEEHLIE 271
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 54/310 (17%)
Query: 8 KSFRKALGALKDTTTVSLAKVNSDYKELDIAIVKATNHVERPAKEKHIRAVFASI----S 63
K +R+ GA+KD L+ + + ++ A++KAT+H + ++++ ++ I S
Sbjct: 6 KLWRRVSGAIKD----KLSLITATDEKFTAAVIKATSHNDVSMDIENVQFIYRYIQSNPS 61
Query: 64 ATRPRADVAYCIHALAKRLSKTHNW-VALKTLIVIH----RALREVDPTFHE--EVINYG 116
+ +P I A++ R+ T NW VALK L+++H + VD ++ +G
Sbjct: 62 SFKP------IIRAVSLRVEHTRNWTVALKCLMLLHGLFFSGIMTVDSIGRLPFDLSGFG 115
Query: 117 RSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIETDRPRTKDLDT 176
R +S F + +VR+Y +FL+ER +L Y+ R
Sbjct: 116 RRKSRFSRTGRF-----------NIFVRAYFMFLDER----SILYYNKNMIR-------- 152
Query: 177 AELLEHLPALQLLLFRVLGCQPQGAAVHNFVIQLALSLVASESTKIYQAISDGTVNLVD- 235
LE + +Q ++ ++ +P G VI+ A+ V SE I I G +
Sbjct: 153 ---LEIIVKMQRIVDSLMRIKPIGET--PLVIE-AMEYVISEVVLINGHICRGFAGFLSD 206
Query: 236 ---KFFEMQRHDALKALDIYRRAGQQAERLSEFYEVCKSLDIGRGERFIKIEQPPASFLQ 292
E+ +A A++I ++ Q E+L +++E C+ + + I + S +
Sbjct: 207 VQSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRGFGVTNAQETSNILRITESQMI 266
Query: 293 AMEEYVKEAP 302
+++ + AP
Sbjct: 267 VLDKLLHIAP 276
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 126/278 (45%), Gaps = 23/278 (8%)
Query: 35 LDIAIVKATNH----VERPAKEKHIRAVFASISATRPRADVAYCIHALAKRLSKTHNW-V 89
L A+VKAT+H ++ + + R V +S S+ +P + ++ R+ +T +W V
Sbjct: 24 LTAAVVKATSHDELSIDTESAQFIYRHVLSSPSSLKP------LVSLISSRVKRTRSWAV 77
Query: 90 ALKTLIVIHRALREVDPTFHEEVINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALF 149
ALK L+++H T E + GR + + + ++ +VR+Y F
Sbjct: 78 ALKGLMLMH-GFFLCKSTVAESI---GRLPFDLSSFGEGNSRIMSKSGGFNLFVRAYFAF 133
Query: 150 LEERLECFRVLKYDIETDRPRTKDLDTAEL-LEHLPALQLLLFRVLGCQPQGAAVHNFVI 208
L+ R F + +R R + + + L + +Q+++ ++ +P G + VI
Sbjct: 134 LDRRSILFH------DGNRHRYNEESSVLIRLVIIRKMQIIVDSLIRIKPIGENMMIPVI 187
Query: 209 QLALSLVASESTKIYQAISDGTVNLV-DKFFEMQRHDALKALDIYRRAGQQAERLSEFYE 267
A+ V SE +IY I ++ + ++ + +A AL I ++ +Q L +++E
Sbjct: 188 NEAMENVVSEIMEIYGWICRRIAEVLPNVHSKIGKTEADLALKIVAKSMKQGGELKKYFE 247
Query: 268 VCKSLDIGRGERFIKIEQPPASFLQAMEEYVKEAPRGS 305
CK L + + + P + + ++E V+ A S
Sbjct: 248 FCKDLGVSNAQEIPNFVRIPEADVIHLDELVRTAMESS 285
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 14 LGALKDTTTVSLAKVNSDY-----KELDIAIVKATNHV-ERPAKEKHIRAVFASISATRP 67
+G KD ++ A++ + K + +A++K+T +P ++ AV IS +
Sbjct: 9 IGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAV---ISYSNS 65
Query: 68 RADVAYCIHALAKRLSKTHN-WVALKTLIVIHRALREVDPTFHEEVINYGRSRSHMLNMA 126
R A AL RL T N VA K+LIVIH+ ++ F E + +GR+ L +
Sbjct: 66 RYAPAAFSAALW-RLRVTKNAIVATKSLIVIHKLIKSSRDKF--EGLGHGRNN---LKLN 119
Query: 127 HFKDDSSPNAWDYSAWVRSYALFLE 151
F D SS + S W+R Y +L+
Sbjct: 120 EFSDKSSNLTLELSQWIRWYGQYLD 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,175,281
Number of Sequences: 539616
Number of extensions: 8986939
Number of successful extensions: 59922
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 56369
Number of HSP's gapped (non-prelim): 2796
length of query: 543
length of database: 191,569,459
effective HSP length: 122
effective length of query: 421
effective length of database: 125,736,307
effective search space: 52934985247
effective search space used: 52934985247
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)