Query 009130
Match_columns 543
No_of_seqs 200 out of 1994
Neff 10.0
Searched_HMMs 46136
Date Thu Mar 28 20:47:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009130.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009130hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.6E-46 3.4E-51 388.0 37.5 507 9-537 23-567 (591)
2 COG2271 UhpC Sugar phosphate p 100.0 7.7E-35 1.7E-39 278.7 24.7 403 11-527 26-439 (448)
3 PRK09556 uhpT sugar phosphate 100.0 1.3E-33 2.8E-38 293.8 30.7 395 28-522 44-449 (467)
4 KOG2504 Monocarboxylate transp 100.0 3.7E-34 8.1E-39 294.3 25.0 428 8-522 40-476 (509)
5 TIGR00892 2A0113 monocarboxyla 100.0 3.9E-33 8.5E-38 288.6 30.2 401 7-517 12-416 (455)
6 TIGR00890 2A0111 Oxalate/Forma 100.0 6.5E-33 1.4E-37 280.6 25.5 369 12-515 2-375 (377)
7 PRK09705 cynX putative cyanate 100.0 1.3E-31 2.8E-36 272.5 32.0 358 29-527 25-386 (393)
8 PRK11663 regulatory protein Uh 100.0 1.3E-31 2.7E-36 276.2 30.8 379 28-522 38-424 (434)
9 PRK11551 putative 3-hydroxyphe 100.0 4.1E-31 9E-36 270.6 31.4 389 1-521 1-395 (406)
10 PRK11273 glpT sn-glycerol-3-ph 100.0 1.2E-30 2.7E-35 270.3 32.5 416 9-535 24-448 (452)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-31 2.9E-36 273.9 23.9 393 10-510 4-409 (412)
12 COG2814 AraJ Arabinose efflux 100.0 1.4E-29 3.1E-34 246.4 32.2 356 29-525 29-389 (394)
13 TIGR00903 2A0129 major facilit 100.0 6.3E-30 1.4E-34 256.3 30.1 351 30-519 8-362 (368)
14 PRK03545 putative arabinose tr 100.0 1.3E-29 2.9E-34 257.8 31.9 350 30-522 26-380 (390)
15 PRK12307 putative sialic acid 100.0 1.9E-29 4.1E-34 260.0 30.2 364 9-487 13-385 (426)
16 PLN00028 nitrate transmembrane 100.0 9.7E-30 2.1E-34 264.7 27.6 369 28-522 51-433 (476)
17 TIGR01299 synapt_SV2 synaptic 100.0 1.5E-29 3.3E-34 269.9 28.7 441 8-527 161-738 (742)
18 PRK14995 methyl viologen resis 100.0 1E-28 2.2E-33 258.6 33.8 399 11-484 3-412 (495)
19 PRK03699 putative transporter; 100.0 4.2E-29 9.2E-34 254.4 30.0 355 27-522 21-380 (394)
20 TIGR00893 2A0114 d-galactonate 100.0 1.8E-29 3.9E-34 257.0 26.9 377 30-519 11-396 (399)
21 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-29 6.1E-34 241.3 24.9 385 5-525 5-404 (417)
22 TIGR00712 glpT glycerol-3-phos 100.0 1.6E-28 3.6E-33 253.5 30.3 405 11-527 24-438 (438)
23 PRK10642 proline/glycine betai 100.0 2.1E-28 4.6E-33 256.0 30.5 371 29-526 32-433 (490)
24 TIGR00894 2A0114euk Na(+)-depe 100.0 2.4E-29 5.2E-34 262.0 22.7 406 7-522 12-450 (465)
25 PRK10077 xylE D-xylose transpo 100.0 4.2E-28 9E-33 254.0 31.8 426 10-536 8-471 (479)
26 PRK10504 putative transporter; 100.0 6.9E-28 1.5E-32 251.6 33.0 385 29-487 26-417 (471)
27 PRK10406 alpha-ketoglutarate t 100.0 7.9E-28 1.7E-32 247.9 32.9 379 8-522 16-424 (432)
28 PRK15034 nitrate/nitrite trans 100.0 4.3E-28 9.3E-33 244.7 29.6 373 28-525 49-457 (462)
29 TIGR00887 2A0109 phosphate:H+ 100.0 1.2E-28 2.7E-33 258.7 24.9 437 2-533 4-499 (502)
30 TIGR00891 2A0112 putative sial 100.0 4.8E-28 1E-32 247.7 27.9 378 8-488 6-393 (405)
31 PRK10213 nepI ribonucleoside t 100.0 2.6E-27 5.5E-32 240.8 32.8 365 8-514 14-383 (394)
32 TIGR00879 SP MFS transporter, 100.0 9.3E-29 2E-33 258.5 22.2 403 30-527 45-475 (481)
33 TIGR00881 2A0104 phosphoglycer 100.0 7.2E-28 1.6E-32 243.8 24.4 356 29-487 11-374 (379)
34 TIGR00897 2A0118 polyol permea 100.0 1.3E-26 2.8E-31 236.7 33.7 355 37-521 37-400 (402)
35 PRK05122 major facilitator sup 100.0 4.3E-27 9.2E-32 240.3 30.2 350 32-522 35-389 (399)
36 PRK15075 citrate-proton sympor 100.0 6.9E-27 1.5E-31 241.1 31.7 353 10-487 11-396 (434)
37 PRK10091 MFS transport protein 100.0 1.6E-26 3.4E-31 234.5 31.6 349 30-520 20-374 (382)
38 TIGR00895 2A0115 benzoate tran 100.0 8.9E-28 1.9E-32 245.0 22.2 383 7-482 10-397 (398)
39 PRK09952 shikimate transporter 100.0 4.4E-26 9.5E-31 235.1 33.3 379 11-521 19-432 (438)
40 PRK03633 putative MFS family t 100.0 2.2E-26 4.7E-31 233.5 30.5 341 30-515 23-365 (381)
41 TIGR00711 efflux_EmrB drug res 100.0 1.5E-26 3.3E-31 242.6 29.9 381 30-485 19-410 (485)
42 PRK12382 putative transporter; 100.0 3.6E-26 7.9E-31 232.9 31.8 348 33-521 36-388 (392)
43 PRK10489 enterobactin exporter 100.0 5.3E-27 1.2E-31 240.9 25.4 365 33-528 37-405 (417)
44 PRK03893 putative sialic acid 100.0 8.8E-27 1.9E-31 245.1 27.4 390 8-514 14-445 (496)
45 PRK11646 multidrug resistance 100.0 5.8E-26 1.3E-30 231.3 30.1 378 2-517 3-383 (400)
46 KOG2532 Permease of the major 100.0 1.8E-27 3.9E-32 241.9 18.5 372 40-522 65-447 (466)
47 PRK15402 multidrug efflux syst 100.0 1.3E-25 2.7E-30 230.0 32.3 356 8-487 7-372 (406)
48 TIGR00896 CynX cyanate transpo 100.0 2E-26 4.3E-31 231.5 25.6 332 29-488 16-351 (355)
49 TIGR00898 2A0119 cation transp 99.9 3.6E-26 7.7E-31 240.9 26.7 387 29-527 105-499 (505)
50 TIGR00900 2A0121 H+ Antiporter 99.9 2.1E-26 4.6E-31 231.9 23.9 341 33-487 19-365 (365)
51 TIGR00710 efflux_Bcr_CflA drug 99.9 2.5E-25 5.4E-30 226.1 31.4 330 30-484 22-360 (385)
52 PRK11043 putative transporter; 99.9 2.8E-25 6E-30 227.1 31.5 329 29-486 22-358 (401)
53 PRK09874 drug efflux system pr 99.9 2.8E-25 6.1E-30 227.6 29.8 353 31-521 32-397 (408)
54 PRK10133 L-fucose transporter; 99.9 5.4E-25 1.2E-29 226.3 31.9 360 29-512 42-423 (438)
55 TIGR00885 fucP L-fucose:H+ sym 99.9 1E-24 2.2E-29 222.3 30.7 375 25-509 14-399 (410)
56 COG2807 CynX Cyanate permease 99.9 2.6E-24 5.6E-29 202.4 29.8 354 29-521 28-384 (395)
57 TIGR00899 2A0120 sugar efflux 99.9 1.3E-24 2.9E-29 219.9 29.6 348 33-520 18-372 (375)
58 PF06813 Nodulin-like: Nodulin 99.9 7E-25 1.5E-29 202.9 24.5 243 12-270 1-248 (250)
59 PRK11010 ampG muropeptide tran 99.9 2.1E-24 4.5E-29 225.1 31.2 363 32-522 31-403 (491)
60 PRK15403 multidrug efflux syst 99.9 6.2E-24 1.3E-28 217.3 33.6 333 29-485 32-373 (413)
61 cd06174 MFS The Major Facilita 99.9 1.7E-24 3.8E-29 216.5 28.0 330 29-519 15-349 (352)
62 PF07690 MFS_1: Major Facilita 99.9 5.2E-26 1.1E-30 228.0 16.0 329 32-476 15-352 (352)
63 KOG2533 Permease of the major 99.9 4.9E-25 1.1E-29 224.5 22.7 336 39-474 72-420 (495)
64 PRK09528 lacY galactoside perm 99.9 2.3E-24 5E-29 221.5 27.6 367 31-522 29-403 (420)
65 TIGR00902 2A0127 phenyl propri 99.9 1.3E-23 2.9E-28 213.0 31.4 343 34-517 25-374 (382)
66 PRK10054 putative transporter; 99.9 1.8E-24 4E-29 220.0 24.8 347 31-517 26-379 (395)
67 PRK10473 multidrug efflux syst 99.9 1.1E-23 2.4E-28 214.6 29.5 326 31-487 21-351 (392)
68 PRK11102 bicyclomycin/multidru 99.9 1.3E-23 2.7E-28 213.0 29.4 325 31-478 9-342 (377)
69 PRK11195 lysophospholipid tran 99.9 5.4E-24 1.2E-28 216.4 26.7 349 36-521 26-379 (393)
70 TIGR00883 2A0106 metabolite-pr 99.9 4.3E-24 9.3E-29 217.4 26.1 350 29-510 9-389 (394)
71 TIGR00886 2A0108 nitrite extru 99.9 4.1E-24 9E-29 215.6 25.2 327 29-470 17-365 (366)
72 PRK11652 emrD multidrug resist 99.9 3.5E-23 7.6E-28 211.0 31.3 330 30-485 25-360 (394)
73 TIGR00889 2A0110 nucleoside tr 99.9 1.8E-23 4E-28 213.9 27.9 359 32-526 22-406 (418)
74 KOG0569 Permease of the major 99.9 2.9E-23 6.3E-28 208.6 27.6 397 39-536 45-468 (485)
75 PRK11128 putative 3-phenylprop 99.9 3.3E-22 7.1E-27 202.9 32.8 342 33-515 24-372 (382)
76 PRK15011 sugar efflux transpor 99.9 2.3E-22 5E-27 204.8 30.9 349 31-521 34-390 (393)
77 TIGR00901 2A0125 AmpG-related 99.9 9E-23 1.9E-27 205.1 27.2 323 32-468 7-355 (356)
78 COG0738 FucP Fucose permease [ 99.9 2.8E-22 6.1E-27 191.7 28.9 372 10-487 10-386 (422)
79 PF06609 TRI12: Fungal trichot 99.9 4.5E-22 9.7E-27 205.1 30.4 424 32-526 63-558 (599)
80 PRK06814 acylglycerophosphoeth 99.9 9.4E-23 2E-27 235.1 27.9 350 38-517 41-417 (1140)
81 PRK10207 dipeptide/tripeptide 99.9 4.6E-21 1E-25 199.1 35.4 410 32-522 34-476 (489)
82 PRK11902 ampG muropeptide tran 99.9 1.9E-21 4.1E-26 198.7 31.3 354 35-520 21-388 (402)
83 PRK08633 2-acyl-glycerophospho 99.9 9.8E-22 2.1E-26 227.4 32.0 359 33-517 30-405 (1146)
84 KOG1330 Sugar transporter/spin 99.9 3.1E-24 6.7E-29 208.0 8.9 370 9-487 28-414 (493)
85 TIGR00882 2A0105 oligosacchari 99.9 2.1E-21 4.5E-26 198.1 29.8 362 33-520 23-393 (396)
86 TIGR00792 gph sugar (Glycoside 99.9 5.4E-21 1.2E-25 197.8 28.0 340 34-488 21-383 (437)
87 TIGR00924 yjdL_sub1_fam amino 99.9 3.2E-20 7E-25 192.7 32.5 410 32-522 30-468 (475)
88 KOG0253 Synaptic vesicle trans 99.9 6.3E-21 1.4E-25 178.6 23.1 407 30-528 95-525 (528)
89 TIGR00805 oat sodium-independe 99.9 2.5E-21 5.4E-26 206.6 22.5 292 32-394 52-397 (633)
90 TIGR02718 sider_RhtX_FptX side 99.9 8.2E-20 1.8E-24 185.9 31.1 365 23-517 10-386 (390)
91 KOG3764 Vesicular amine transp 99.9 1.7E-21 3.8E-26 184.8 17.3 344 41-521 99-453 (464)
92 PRK09584 tppB putative tripept 99.9 2.2E-19 4.9E-24 187.5 30.8 408 34-525 43-482 (500)
93 KOG0252 Inorganic phosphate tr 99.9 1.2E-20 2.7E-25 182.2 19.0 429 9-533 36-508 (538)
94 PF05977 MFS_3: Transmembrane 99.9 1.6E-19 3.4E-24 187.2 27.9 356 37-521 34-393 (524)
95 KOG4686 Predicted sugar transp 99.9 3.4E-21 7.4E-26 174.0 12.8 369 10-488 40-417 (459)
96 TIGR00806 rfc RFC reduced fola 99.9 5.4E-20 1.2E-24 182.3 22.3 352 29-470 42-401 (511)
97 KOG0254 Predicted transporter 99.8 3.5E-19 7.5E-24 187.3 26.7 386 49-537 90-498 (513)
98 KOG2563 Permease of the major 99.8 6E-20 1.3E-24 177.8 18.7 411 7-530 38-458 (480)
99 PF00083 Sugar_tr: Sugar (and 99.8 1.4E-23 3.1E-28 217.9 -13.6 380 48-535 46-449 (451)
100 PRK09669 putative symporter Ya 99.8 2.2E-17 4.7E-22 171.0 28.6 345 35-489 32-392 (444)
101 KOG0255 Synaptic vesicle trans 99.8 5E-18 1.1E-22 179.5 22.9 384 41-530 111-500 (521)
102 PRK09848 glucuronide transport 99.8 3.7E-17 7.9E-22 169.5 27.4 161 321-488 220-391 (448)
103 PRK15462 dipeptide/tripeptide 99.8 7.8E-16 1.7E-20 157.7 36.4 416 29-514 25-469 (493)
104 TIGR01272 gluP glucose/galacto 99.8 9.9E-17 2.1E-21 157.0 25.3 285 122-508 9-301 (310)
105 PF01306 LacY_symp: LacY proto 99.8 9.2E-17 2E-21 158.8 24.0 186 321-525 212-403 (412)
106 PF11700 ATG22: Vacuole efflux 99.8 4.7E-16 1E-20 159.6 28.7 186 320-521 272-467 (477)
107 PF03825 Nuc_H_symport: Nucleo 99.7 2.4E-15 5.3E-20 151.5 31.0 189 321-522 199-395 (400)
108 TIGR00788 fbt folate/biopterin 99.7 5.8E-16 1.3E-20 160.5 26.6 364 23-488 35-416 (468)
109 PRK10429 melibiose:sodium symp 99.7 1.4E-15 3.1E-20 158.5 29.4 349 35-488 29-396 (473)
110 TIGR01301 GPH_sucrose GPH fami 99.7 3.3E-15 7.2E-20 152.4 27.9 386 37-526 28-475 (477)
111 PF13347 MFS_2: MFS/sugar tran 99.7 4.4E-16 9.6E-21 160.4 21.8 350 34-488 23-387 (428)
112 KOG2615 Permease of the major 99.7 2.2E-16 4.8E-21 149.5 17.2 333 50-487 70-416 (451)
113 PRK11462 putative transporter; 99.7 1.6E-14 3.4E-19 149.7 30.0 345 35-487 32-389 (460)
114 COG2211 MelB Na+/melibiose sym 99.6 1.4E-13 3E-18 137.6 26.6 353 35-490 35-401 (467)
115 COG2270 Permeases of the major 99.6 5.6E-14 1.2E-18 136.1 21.7 184 320-521 243-428 (438)
116 COG3104 PTR2 Dipeptide/tripept 99.6 1E-12 2.3E-17 130.2 30.5 416 29-521 37-486 (498)
117 PF03209 PUCC: PUCC protein; 99.6 1.1E-12 2.4E-17 127.6 29.7 375 37-518 4-394 (403)
118 COG2814 AraJ Arabinose efflux 99.6 1.3E-13 2.8E-18 135.1 17.3 176 329-523 13-189 (394)
119 PF03137 OATP: Organic Anion T 99.5 5E-15 1.1E-19 154.3 0.2 394 33-487 23-516 (539)
120 PRK11663 regulatory protein Uh 99.5 6.7E-13 1.5E-17 137.0 15.5 173 329-520 23-196 (434)
121 PRK10091 MFS transport protein 99.5 2.1E-12 4.6E-17 131.0 17.3 176 329-523 3-179 (382)
122 TIGR00710 efflux_Bcr_CflA drug 99.4 2.8E-12 6.1E-17 130.2 17.0 161 345-524 21-182 (385)
123 PRK03545 putative arabinose tr 99.4 3.9E-12 8.5E-17 129.5 17.7 174 331-523 11-185 (390)
124 KOG2325 Predicted transporter/ 99.4 4.9E-12 1.1E-16 126.9 17.7 158 6-181 26-188 (488)
125 PRK10504 putative transporter; 99.4 2.8E-12 6E-17 134.1 16.4 176 329-523 10-186 (471)
126 TIGR02332 HpaX 4-hydroxyphenyl 99.4 4.4E-12 9.5E-17 129.9 17.2 182 331-525 10-192 (412)
127 PRK10054 putative transporter; 99.4 3.6E-12 7.9E-17 129.8 16.2 174 329-522 7-182 (395)
128 PRK10213 nepI ribonucleoside t 99.4 5.1E-12 1.1E-16 128.6 17.1 154 344-516 35-189 (394)
129 COG2271 UhpC Sugar phosphate p 99.4 9.5E-13 2.1E-17 127.4 10.9 177 329-524 29-208 (448)
130 PF07690 MFS_1: Major Facilita 99.4 1.5E-12 3.3E-17 130.3 12.3 165 338-521 5-171 (352)
131 TIGR01299 synapt_SV2 synaptic 99.4 7.6E-12 1.7E-16 134.6 17.8 185 327-518 161-351 (742)
132 TIGR00900 2A0121 H+ Antiporter 99.4 3.3E-12 7.2E-17 128.4 13.7 169 334-521 4-178 (365)
133 TIGR00924 yjdL_sub1_fam amino 99.4 4E-12 8.6E-17 132.3 13.9 172 329-519 10-189 (475)
134 TIGR00893 2A0114 d-galactonate 99.4 2.5E-12 5.4E-17 130.7 11.7 158 347-523 12-170 (399)
135 TIGR00712 glpT glycerol-3-phos 99.4 9.1E-12 2E-16 128.8 15.7 179 327-524 25-208 (438)
136 PRK14995 methyl viologen resis 99.4 8.1E-12 1.8E-16 131.1 15.3 174 332-524 9-184 (495)
137 PLN00028 nitrate transmembrane 99.4 3.2E-11 7E-16 125.8 19.6 168 344-522 51-219 (476)
138 TIGR00711 efflux_EmrB drug res 99.4 5.1E-12 1.1E-16 132.6 13.6 172 334-524 7-179 (485)
139 PRK10473 multidrug efflux syst 99.4 1.5E-11 3.3E-16 125.2 16.7 164 343-525 17-181 (392)
140 PRK11551 putative 3-hydroxyphe 99.3 2.1E-11 4.5E-16 124.9 16.5 159 347-524 33-192 (406)
141 TIGR00891 2A0112 putative sial 99.3 2.7E-11 5.8E-16 123.8 17.2 167 331-514 14-181 (405)
142 TIGR00895 2A0115 benzoate tran 99.3 7.2E-12 1.6E-16 127.6 12.9 159 346-523 34-193 (398)
143 PRK15403 multidrug efflux syst 99.3 2.1E-11 4.5E-16 124.9 16.0 162 344-524 31-193 (413)
144 PRK09584 tppB putative tripept 99.3 1.8E-11 3.8E-16 128.2 15.3 179 323-520 14-199 (500)
145 PRK11652 emrD multidrug resist 99.3 5.1E-11 1.1E-15 121.5 18.1 174 332-524 11-185 (394)
146 PRK03699 putative transporter; 99.3 2.1E-11 4.5E-16 124.3 15.1 173 329-519 7-180 (394)
147 PRK11102 bicyclomycin/multidru 99.3 2E-11 4.2E-16 123.7 14.8 159 347-524 9-168 (377)
148 PRK09874 drug efflux system pr 99.3 4.7E-11 1E-15 122.3 17.6 175 330-524 15-195 (408)
149 TIGR00903 2A0129 major facilit 99.3 2.4E-11 5.2E-16 122.1 14.6 158 347-524 9-167 (368)
150 PRK15462 dipeptide/tripeptide 99.3 3.6E-11 7.9E-16 123.5 15.9 173 329-520 9-187 (493)
151 PRK15034 nitrate/nitrite trans 99.3 7.6E-11 1.7E-15 119.8 18.0 190 328-524 33-234 (462)
152 TIGR00881 2A0104 phosphoglycer 99.3 4.6E-12 9.9E-17 128.1 9.2 162 344-524 10-173 (379)
153 PRK10489 enterobactin exporter 99.3 1.2E-11 2.6E-16 127.2 12.4 179 323-520 11-195 (417)
154 PRK15402 multidrug efflux syst 99.3 4.2E-11 9.2E-16 122.6 16.3 160 346-524 30-190 (406)
155 TIGR00897 2A0118 polyol permea 99.3 3.6E-11 7.8E-16 122.9 15.6 174 330-521 14-192 (402)
156 PRK12307 putative sialic acid 99.3 5.1E-11 1.1E-15 122.8 16.7 156 334-508 23-179 (426)
157 PRK11646 multidrug resistance 99.3 6.9E-11 1.5E-15 120.6 17.4 171 332-522 13-185 (400)
158 TIGR00890 2A0111 Oxalate/Forma 99.3 2.1E-11 4.6E-16 123.1 13.3 161 342-522 16-177 (377)
159 PF03092 BT1: BT1 family; Int 99.3 4.9E-10 1.1E-14 114.8 23.2 352 33-487 10-382 (433)
160 PRK11043 putative transporter; 99.3 1E-10 2.2E-15 119.6 18.0 157 347-522 24-181 (401)
161 TIGR00886 2A0108 nitrite extru 99.3 4.4E-11 9.5E-16 120.6 15.0 181 330-520 2-186 (366)
162 PRK11273 glpT sn-glycerol-3-ph 99.3 7.5E-11 1.6E-15 122.4 17.0 157 349-524 49-210 (452)
163 PRK11195 lysophospholipid tran 99.3 4.5E-11 9.9E-16 121.6 14.3 166 328-516 2-168 (393)
164 KOG1330 Sugar transporter/spin 99.3 1.8E-12 4E-17 126.7 3.5 178 333-528 37-215 (493)
165 PRK10207 dipeptide/tripeptide 99.3 6.6E-11 1.4E-15 123.3 14.8 170 329-517 14-189 (489)
166 PRK03893 putative sialic acid 99.2 9.1E-11 2E-15 123.5 15.2 161 330-509 21-182 (496)
167 cd06174 MFS The Major Facilita 99.2 1.3E-10 2.8E-15 116.0 15.6 169 334-521 4-173 (352)
168 PRK09556 uhpT sugar phosphate 99.2 5.8E-11 1.3E-15 123.8 12.0 158 348-521 48-211 (467)
169 PRK09705 cynX putative cyanate 99.2 3.5E-10 7.7E-15 115.1 17.4 150 347-515 27-177 (393)
170 PRK03633 putative MFS family t 99.2 2.1E-10 4.5E-15 116.5 15.3 151 328-485 5-156 (381)
171 TIGR00879 SP MFS transporter, 99.2 1.3E-10 2.7E-15 121.4 13.8 152 348-518 47-213 (481)
172 PRK12382 putative transporter; 99.2 2.8E-10 6E-15 116.0 16.0 163 328-509 14-186 (392)
173 TIGR00892 2A0113 monocarboxyla 99.2 3.3E-10 7.2E-15 117.6 15.4 154 348-521 38-193 (455)
174 KOG3764 Vesicular amine transp 99.2 9.5E-11 2.1E-15 112.4 9.9 149 359-526 101-251 (464)
175 PF06609 TRI12: Fungal trichot 99.2 3E-10 6.5E-15 118.0 14.3 177 327-524 38-219 (599)
176 PRK05122 major facilitator sup 99.2 4.4E-10 9.6E-15 114.8 15.3 165 329-512 15-189 (399)
177 PRK09528 lacY galactoside perm 99.2 3E-10 6.6E-15 116.8 13.4 178 324-523 5-192 (420)
178 PRK10077 xylE D-xylose transpo 99.2 5.1E-10 1.1E-14 117.3 14.9 150 360-520 51-213 (479)
179 TIGR00894 2A0114euk Na(+)-depe 99.1 1.6E-10 3.5E-15 120.5 10.5 147 358-523 70-220 (465)
180 TIGR00899 2A0120 sugar efflux 99.1 6.2E-10 1.3E-14 112.6 14.3 162 345-524 13-178 (375)
181 TIGR00806 rfc RFC reduced fola 99.1 1.3E-09 2.9E-14 109.0 15.3 160 349-526 46-207 (511)
182 TIGR00882 2A0105 oligosacchari 99.1 8.9E-10 1.9E-14 112.4 14.4 173 328-522 1-183 (396)
183 TIGR00885 fucP L-fucose:H+ sym 99.1 1.8E-09 4E-14 110.3 15.8 181 331-518 5-203 (410)
184 KOG3626 Organic anion transpor 99.1 3.3E-09 7.1E-14 111.1 16.9 292 33-394 117-459 (735)
185 PF01770 Folate_carrier: Reduc 99.1 8.1E-08 1.8E-12 95.1 25.1 352 32-469 23-387 (412)
186 PRK11010 ampG muropeptide tran 99.1 3.8E-09 8.2E-14 110.6 16.7 182 324-520 7-193 (491)
187 TIGR00902 2A0127 phenyl propri 99.1 1.6E-09 3.4E-14 110.0 12.9 160 332-510 7-167 (382)
188 PTZ00207 hypothetical protein; 99.0 4E-09 8.6E-14 110.4 15.1 159 343-523 41-206 (591)
189 TIGR00896 CynX cyanate transpo 99.0 2.2E-09 4.9E-14 107.7 13.0 149 348-514 19-167 (355)
190 PRK10642 proline/glycine betai 99.0 9.2E-09 2E-13 107.9 18.1 133 370-513 63-204 (490)
191 PF05977 MFS_3: Transmembrane 99.0 5.2E-09 1.1E-13 109.1 15.9 175 323-516 4-184 (524)
192 PRK15011 sugar efflux transpor 99.0 5.2E-09 1.1E-13 106.6 15.7 178 328-524 14-196 (393)
193 PRK11902 ampG muropeptide tran 99.0 5.6E-09 1.2E-13 106.8 15.9 160 345-518 15-178 (402)
194 PRK10133 L-fucose transporter; 99.0 5.2E-09 1.1E-13 108.0 15.5 146 330-482 27-176 (438)
195 TIGR00880 2_A_01_02 Multidrug 99.0 1.2E-09 2.7E-14 93.1 9.2 133 371-522 5-138 (141)
196 COG2223 NarK Nitrate/nitrite t 99.0 3.2E-09 7E-14 103.4 12.4 177 329-523 14-194 (417)
197 TIGR00805 oat sodium-independe 99.0 1E-09 2.3E-14 117.7 9.8 166 349-521 53-280 (633)
198 KOG2816 Predicted transporter 99.0 7.7E-08 1.7E-12 98.2 22.5 311 62-487 77-394 (463)
199 TIGR00898 2A0119 cation transp 99.0 1.9E-09 4.2E-14 113.7 11.0 148 351-520 111-262 (505)
200 PRK10406 alpha-ketoglutarate t 99.0 1.2E-08 2.7E-13 105.2 16.6 157 347-514 40-211 (432)
201 TIGR01301 GPH_sucrose GPH fami 99.0 1.7E-08 3.7E-13 103.5 17.0 176 347-525 22-221 (477)
202 TIGR00880 2_A_01_02 Multidrug 99.0 5.3E-09 1.1E-13 89.2 11.3 119 63-204 14-133 (141)
203 PRK09952 shikimate transporter 99.0 3E-08 6.5E-13 102.5 18.8 141 360-512 56-210 (438)
204 PRK11128 putative 3-phenylprop 99.0 5.4E-09 1.2E-13 106.1 12.9 151 346-515 21-172 (382)
205 COG3104 PTR2 Dipeptide/tripept 99.0 4E-09 8.7E-14 105.1 11.2 176 331-524 23-208 (498)
206 TIGR00887 2A0109 phosphate:H+ 99.0 1.7E-08 3.6E-13 106.4 16.4 150 361-517 53-220 (502)
207 TIGR00901 2A0125 AmpG-related 98.9 1.4E-08 3E-13 102.0 14.7 169 348-524 7-180 (356)
208 KOG2532 Permease of the major 98.9 5.1E-09 1.1E-13 107.3 11.3 148 358-524 67-218 (466)
209 PRK15075 citrate-proton sympor 98.9 3.2E-08 6.9E-13 102.3 17.2 166 332-508 18-198 (434)
210 PF05631 DUF791: Protein of un 98.9 1.8E-07 3.9E-12 90.1 20.2 90 38-151 59-150 (354)
211 PRK06814 acylglycerophosphoeth 98.9 1.1E-08 2.3E-13 118.9 14.3 178 324-520 6-193 (1140)
212 KOG2615 Permease of the major 98.9 5.3E-09 1.2E-13 100.0 8.5 115 362-484 66-181 (451)
213 KOG2533 Permease of the major 98.8 2.4E-08 5.3E-13 102.6 12.5 156 357-524 74-229 (495)
214 TIGR00889 2A0110 nucleoside tr 98.8 1.8E-08 4E-13 103.3 11.5 155 35-209 230-403 (418)
215 TIGR00792 gph sugar (Glycoside 98.8 3.2E-08 7E-13 102.4 12.4 169 349-524 19-196 (437)
216 KOG0254 Predicted transporter 98.8 6.4E-08 1.4E-12 102.1 14.5 142 365-525 90-232 (513)
217 PRK08633 2-acyl-glycerophospho 98.8 5.4E-08 1.2E-12 113.3 15.2 155 324-485 4-165 (1146)
218 KOG3098 Uncharacterized conser 98.8 2.3E-06 4.9E-11 86.4 24.1 318 54-471 57-401 (461)
219 KOG0255 Synaptic vesicle trans 98.7 7.3E-08 1.6E-12 102.1 12.3 138 358-517 112-250 (521)
220 TIGR00883 2A0106 metabolite-pr 98.7 2.6E-07 5.7E-12 93.7 14.7 131 375-516 46-185 (394)
221 KOG2504 Monocarboxylate transp 98.7 2.5E-07 5.3E-12 96.2 14.2 153 351-523 68-222 (509)
222 TIGR02718 sider_RhtX_FptX side 98.7 3.1E-07 6.7E-12 93.5 14.1 170 336-523 8-185 (390)
223 PF11700 ATG22: Vacuole efflux 98.6 7.1E-07 1.5E-11 92.2 13.0 181 10-209 279-468 (477)
224 PRK09669 putative symporter Ya 98.5 1.5E-06 3.3E-11 90.1 15.4 168 349-523 29-205 (444)
225 PF02487 CLN3: CLN3 protein; 98.5 4.4E-05 9.5E-10 75.9 24.5 105 363-476 280-388 (402)
226 PF01306 LacY_symp: LacY proto 98.5 2.9E-07 6.2E-12 91.8 8.6 176 326-521 4-187 (412)
227 COG0738 FucP Fucose permease [ 98.5 3.1E-06 6.8E-11 82.3 14.8 166 350-522 34-210 (422)
228 PRK10429 melibiose:sodium symp 98.5 2.5E-06 5.3E-11 89.2 14.6 170 347-523 24-202 (473)
229 COG2270 Permeases of the major 98.5 1.1E-06 2.4E-11 86.0 10.6 150 12-184 252-403 (438)
230 PF13347 MFS_2: MFS/sugar tran 98.4 8.5E-07 1.8E-11 91.5 10.3 169 349-524 21-200 (428)
231 KOG0252 Inorganic phosphate tr 98.4 2E-06 4.3E-11 84.8 11.7 105 361-471 81-193 (538)
232 PF03825 Nuc_H_symport: Nucleo 98.4 2E-06 4.4E-11 87.0 12.3 109 339-452 12-121 (400)
233 KOG2325 Predicted transporter/ 98.4 3E-06 6.5E-11 85.7 12.7 188 331-526 36-233 (488)
234 PRK11462 putative transporter; 98.4 7E-06 1.5E-10 85.3 15.7 168 349-523 29-205 (460)
235 TIGR01272 gluP glucose/galacto 98.3 4.2E-06 9E-11 82.1 11.3 122 42-188 172-294 (310)
236 COG2807 CynX Cyanate permease 98.3 1.4E-05 3.1E-10 76.7 14.2 153 350-521 33-185 (395)
237 KOG4686 Predicted sugar transp 98.3 1.3E-05 2.7E-10 74.0 12.3 151 9-186 263-416 (459)
238 PF05631 DUF791: Protein of un 98.3 3.8E-05 8.2E-10 74.4 15.9 155 355-526 60-220 (354)
239 TIGR00926 2A1704 Peptide:H+ sy 98.2 0.00028 6E-09 75.8 23.3 157 34-206 9-179 (654)
240 KOG3762 Predicted transporter 98.2 3.7E-06 7.9E-11 84.5 8.4 181 324-524 366-549 (618)
241 TIGR00788 fbt folate/biopterin 98.2 1.8E-05 4E-10 82.3 13.4 160 346-521 42-208 (468)
242 KOG0569 Permease of the major 98.2 1.4E-05 3.1E-10 81.5 12.0 137 367-520 63-203 (485)
243 PF06813 Nodulin-like: Nodulin 98.2 3.1E-05 6.7E-10 72.3 12.8 128 341-476 14-149 (250)
244 COG2211 MelB Na+/melibiose sym 98.2 5.6E-05 1.2E-09 76.5 15.3 171 347-524 30-209 (467)
245 PF03209 PUCC: PUCC protein; 98.1 3.7E-05 8.1E-10 75.6 13.4 131 355-487 6-153 (403)
246 PRK09848 glucuronide transport 98.1 4E-05 8.7E-10 79.6 13.9 116 350-466 29-154 (448)
247 PF00083 Sugar_tr: Sugar (and 98.1 8.9E-08 1.9E-12 99.5 -6.1 139 364-518 46-188 (451)
248 KOG0637 Sucrose transporter an 98.0 0.00013 2.8E-09 72.3 13.9 128 37-179 56-200 (498)
249 TIGR00926 2A1704 Peptide:H+ sy 98.0 9.8E-05 2.1E-09 79.2 14.0 164 347-522 5-182 (654)
250 KOG4332 Predicted sugar transp 97.9 0.00013 2.8E-09 66.9 11.1 98 38-159 62-160 (454)
251 TIGR00769 AAA ADP/ATP carrier 97.9 0.027 5.9E-07 58.0 28.4 131 37-182 27-189 (472)
252 TIGR00939 2a57 Equilibrative N 97.7 0.0028 6.1E-08 64.9 18.2 102 365-471 308-421 (437)
253 PF03092 BT1: BT1 family; Int 97.7 0.0005 1.1E-08 70.7 12.4 157 353-524 14-177 (433)
254 COG0477 ProP Permeases of the 97.7 0.00046 9.9E-09 66.8 11.7 137 32-189 21-165 (338)
255 KOG0253 Synaptic vesicle trans 97.6 0.0012 2.6E-08 63.7 13.5 141 359-520 108-249 (528)
256 PF13000 Acatn: Acetyl-coenzym 97.6 0.017 3.6E-07 58.5 22.1 80 440-520 423-523 (544)
257 PF06963 FPN1: Ferroportin1 (F 97.6 0.031 6.7E-07 56.9 23.3 144 322-472 252-406 (432)
258 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00034 7.4E-09 52.4 6.2 59 336-394 7-65 (77)
259 KOG2563 Permease of the major 97.3 0.0065 1.4E-07 60.5 14.3 112 359-478 75-195 (480)
260 KOG3810 Micronutrient transpor 97.2 0.0047 1E-07 59.2 11.3 188 322-518 227-417 (433)
261 KOG2816 Predicted transporter 97.2 0.0045 9.7E-08 63.7 12.3 131 374-527 72-204 (463)
262 PF06779 DUF1228: Protein of u 97.1 0.00078 1.7E-08 50.9 4.6 71 29-119 8-79 (85)
263 PF05978 UNC-93: Ion channel r 97.1 0.012 2.7E-07 50.7 12.1 108 362-476 35-142 (156)
264 PF05978 UNC-93: Ion channel r 97.0 0.0036 7.8E-08 54.0 8.2 101 57-181 47-148 (156)
265 KOG3574 Acetyl-CoA transporter 96.9 0.091 2E-06 51.4 17.2 169 320-489 256-435 (510)
266 COG0477 ProP Permeases of the 96.8 0.056 1.2E-06 51.9 16.4 145 350-511 23-174 (338)
267 KOG1237 H+/oligopeptide sympor 96.8 0.47 1E-05 50.4 23.9 179 9-201 32-237 (571)
268 PF03137 OATP: Organic Anion T 96.7 0.00032 6.9E-09 73.8 -0.4 126 352-484 26-202 (539)
269 PF00854 PTR2: POT family; In 96.5 0.02 4.3E-07 57.8 10.8 108 401-521 2-122 (372)
270 KOG3626 Organic anion transpor 96.4 0.0085 1.8E-07 63.9 7.1 160 358-524 126-345 (735)
271 KOG3762 Predicted transporter 96.2 0.013 2.8E-07 59.7 7.0 122 41-185 399-523 (618)
272 PF01770 Folate_carrier: Reduc 96.2 0.1 2.3E-06 52.3 13.4 160 349-526 23-186 (412)
273 TIGR00769 AAA ADP/ATP carrier 96.2 0.2 4.3E-06 51.7 15.8 145 329-484 7-190 (472)
274 PF01733 Nucleoside_tran: Nucl 96.0 0.002 4.2E-08 63.2 0.5 98 368-470 186-296 (309)
275 PF06779 DUF1228: Protein of u 96.0 0.028 6.1E-07 42.6 6.5 70 344-419 7-76 (85)
276 PF12832 MFS_1_like: MFS_1 lik 96.0 0.012 2.7E-07 44.0 4.4 55 33-102 20-75 (77)
277 KOG0637 Sucrose transporter an 95.9 0.034 7.4E-07 55.6 8.2 125 347-472 50-193 (498)
278 PRK03612 spermidine synthase; 95.5 0.39 8.5E-06 50.6 15.2 123 358-487 44-174 (521)
279 KOG3880 Predicted small molecu 95.0 1.3 2.8E-05 42.3 14.8 89 64-179 79-167 (409)
280 PF00854 PTR2: POT family; In 94.4 0.15 3.3E-06 51.4 8.4 117 93-209 2-123 (372)
281 KOG1479 Nucleoside transporter 94.2 7 0.00015 39.3 21.3 99 365-471 283-391 (406)
282 KOG3098 Uncharacterized conser 92.4 1.2 2.7E-05 45.6 10.9 96 370-471 56-151 (461)
283 PF06963 FPN1: Ferroportin1 (F 92.2 8.4 0.00018 39.5 16.5 55 456-523 147-201 (432)
284 PF03219 TLC: TLC ATP/ADP tran 91.8 18 0.0004 37.7 19.9 116 52-182 62-204 (491)
285 KOG3574 Acetyl-CoA transporter 91.3 3 6.6E-05 41.2 11.4 65 329-396 31-100 (510)
286 KOG4332 Predicted sugar transp 90.7 0.57 1.2E-05 43.7 5.7 152 356-524 64-222 (454)
287 KOG1237 H+/oligopeptide sympor 90.6 1.7 3.7E-05 46.2 10.1 160 345-522 53-245 (571)
288 PF07672 MFS_Mycoplasma: Mycop 90.2 15 0.00034 34.4 14.5 21 320-340 85-105 (267)
289 PRK03612 spermidine synthase; 89.6 4.1 8.8E-05 43.0 11.8 78 128-205 115-194 (521)
290 PF02487 CLN3: CLN3 protein; 89.5 5.5 0.00012 40.2 12.0 124 375-521 70-194 (402)
291 KOG1479 Nucleoside transporter 77.6 49 0.0011 33.4 12.6 49 344-394 33-82 (406)
292 PF03219 TLC: TLC ATP/ADP tran 70.2 1.5E+02 0.0032 31.2 16.1 42 442-484 164-205 (491)
293 COG3202 ATP/ADP translocase [E 68.9 1.5E+02 0.0033 30.8 27.8 156 9-182 22-208 (509)
294 PF11299 DUF3100: Protein of u 62.8 14 0.0003 33.8 4.6 99 67-177 127-225 (241)
295 PF11947 DUF3464: Protein of u 59.1 19 0.00041 30.7 4.6 32 440-471 112-143 (153)
296 PF07857 DUF1632: CEO family ( 58.1 1.7E+02 0.0036 27.6 13.4 26 335-360 184-209 (254)
297 COG4262 Predicted spermidine s 55.4 2.2E+02 0.0049 28.2 13.2 113 333-449 11-132 (508)
298 COG5336 Uncharacterized protei 53.5 13 0.00029 29.2 2.6 32 455-487 39-70 (116)
299 COG3202 ATP/ADP translocase [E 49.3 3.3E+02 0.0072 28.4 15.3 41 442-483 168-208 (509)
300 PF10225 DUF2215: Uncharacteri 48.1 2.4E+02 0.0052 26.5 13.0 53 123-178 34-86 (249)
301 PF02990 EMP70: Endomembrane p 45.3 98 0.0021 32.8 8.5 71 323-394 252-323 (521)
302 COG1575 MenA 1,4-dihydroxy-2-n 36.5 2.6E+02 0.0056 27.1 8.9 60 150-213 140-200 (303)
303 COG3114 CcmD Heme exporter pro 36.1 82 0.0018 22.2 4.0 15 505-519 20-34 (67)
304 TIGR00939 2a57 Equilibrative N 35.1 4.9E+02 0.011 26.8 11.5 38 429-471 113-150 (437)
305 COG5336 Uncharacterized protei 33.2 1E+02 0.0022 24.5 4.6 20 375-394 53-72 (116)
306 KOG2082 K+/Cl- cotransporter K 29.8 8.1E+02 0.018 27.2 12.0 57 69-142 473-532 (1075)
307 KOG3097 Predicted membrane pro 27.8 1.1E+02 0.0023 30.2 4.7 61 379-449 73-137 (390)
308 PF06800 Sugar_transport: Suga 27.7 1.9E+02 0.0041 27.5 6.4 12 433-444 48-59 (269)
309 PTZ00370 STEVOR; Provisional 25.9 1.9E+02 0.0041 27.5 5.9 33 500-532 257-289 (296)
310 KOG4830 Predicted sugar transp 24.8 54 0.0012 30.8 2.2 140 320-464 192-337 (412)
311 PF07857 DUF1632: CEO family ( 24.4 1.7E+02 0.0037 27.6 5.4 23 503-525 117-139 (254)
312 PF15086 UPF0542: Uncharacteri 23.1 2.4E+02 0.0052 20.6 4.6 24 502-525 25-48 (74)
313 PF14012 DUF4229: Protein of u 23.0 2E+02 0.0044 20.8 4.5 34 504-537 33-66 (69)
314 PF10183 ESSS: ESSS subunit of 22.5 1.7E+02 0.0037 23.2 4.4 28 499-526 58-85 (105)
315 PF08611 DUF1774: Fungal prote 22.5 2.3E+02 0.005 22.1 4.8 21 500-520 52-72 (97)
316 PF13782 SpoVAB: Stage V sporu 22.1 1.9E+02 0.0041 23.2 4.5 77 91-175 23-104 (110)
317 PRK07419 1,4-dihydroxy-2-napht 20.8 6.6E+02 0.014 24.4 8.9 65 149-217 137-202 (304)
318 COG4603 ABC-type uncharacteriz 20.5 8.6E+02 0.019 24.3 10.5 60 424-487 113-172 (356)
319 PF11299 DUF3100: Protein of u 20.2 2.6E+02 0.0057 25.8 5.5 91 379-470 121-218 (241)
320 PF06645 SPC12: Microsomal sig 20.1 1.3E+02 0.0027 22.4 3.0 29 477-519 25-53 (76)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-46 Score=388.02 Aligned_cols=507 Identities=15% Similarity=0.221 Sum_probs=387.0
Q ss_pred chhhHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhccccccccccccccc
Q 009130 9 TNSKWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFL 88 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~ 88 (543)
..+||.+++++++++.+.|..|.++++.|.+++++|+|+.|++++.........++++.|++.||+|
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G------------- 89 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLG------------- 89 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 4679999999999888889999999999999999999999999766554444446778999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhh
Q 009130 89 RGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVG 168 (543)
Q Consensus 89 ~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~ 168 (543)
+|+++.++.+++++|+++.+++..+.... +++.++++|+++|+|++..++.+..++.+|||++||+++|+..++.+
T Consensus 90 --~R~vllig~ll~~iG~ll~ala~~~~i~~--s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~g 165 (591)
T PTZ00207 90 --PRPIFVLSMTVFCLGTLLFALTFQEVIEG--SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTG 165 (591)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHhcccccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHH
Confidence 99999999999999999966543332223 38999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCc--------c-cch-----------------hh
Q 009130 169 LSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSV--------D-DKK-----------------HL 222 (543)
Q Consensus 169 lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~-----------------~~ 222 (543)
+|+++.+++...++..+.+.++++++.++.+++++...+++.+|.+.. + ++. .+
T Consensus 166 LGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f 245 (591)
T PTZ00207 166 LGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRF 245 (591)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceeh
Confidence 999988888887776555677788888888888888888887753321 1 111 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH-HHhhcc-cccccccccccccCCCCCCCCCCCCCCccccCC
Q 009130 223 NAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILL-LLLASP-LRVAITADREDAMTSPKLSTPQQDPLAYHELAD 300 (543)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (543)
.....+.+.++.|+.+.+..++....++......+.+++ +++..| +..+.+......+ +++++.|.++..+...+.
T Consensus 246 ~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 323 (591)
T PTZ00207 246 VYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRP--HDDSDGKAKEHVEAGEEV 323 (591)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc--CCCccccccccccccccc
Confidence 345667777889999999999988888777776666554 455555 4444433111100 000000000000000000
Q ss_pred Cccchhccccccc-chhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhh-CCCchh--hHHHHHHHHHH
Q 009130 301 DESKVTAAFDDKI-LKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESL-HYSTTE--INSLISLWSIW 376 (543)
Q Consensus 301 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~--a~~~~~~~~i~ 376 (543)
.+++....+.+.+ ..+.++.+.++.+++..||.+++.+++..+.+..+++++.++.+.+ |++.++ ...++++.+++
T Consensus 324 ~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~ 403 (591)
T PTZ00207 324 SAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVG 403 (591)
T ss_pred cccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHH
Confidence 0000000000001 1122334889999999999999999999999999999999999999 884333 33388999999
Q ss_pred HhhhccccccchhhhhhhcC----CCchHHHHHHHHHHHHHHHHHhhcCc-chHHHHHHHHHhhhhhhhhhHHHHHHhhc
Q 009130 377 NFFGRFGAGYGSDVFLHKLG----WARPIFMVITLVAMSIGHIAIASGFP-GNLFVGTMIVGVCYGSQWSLMPTITSEIF 451 (543)
Q Consensus 377 ~~ig~~~~G~lsD~~~~~~~----~~r~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 451 (543)
+.+||+..|.++ .+-+|++ .+|...+.+..+ ++++.++++...+ ..+++..++.|+++|..++..+++++|+|
T Consensus 404 ~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selF 481 (591)
T PTZ00207 404 SAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIF 481 (591)
T ss_pred HHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHh
Confidence 999999999998 4444433 566556666666 6666666654444 78999999999999999999999999999
Q ss_pred CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC-CccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhH
Q 009130 452 GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE-DHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRFYN 530 (543)
Q Consensus 452 ~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~-~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 530 (543)
+ |+.|+.+.+..++.-+|+++++..++|.++|..+.++ +..|.|.+||+.+|++++++++++++....+..|+|+.++
T Consensus 482 g-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~ 560 (591)
T PTZ00207 482 A-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCL 560 (591)
T ss_pred c-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHH
Confidence 9 9999999999999999999998899999999887554 3489999999999999999999999999999999999888
Q ss_pred HHHHHhh
Q 009130 531 QVVIRRL 537 (543)
Q Consensus 531 ~~~~~~~ 537 (543)
+.+++|.
T Consensus 561 ~~~~~~~ 567 (591)
T PTZ00207 561 KALEERR 567 (591)
T ss_pred HHHHHHH
Confidence 8766554
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.7e-35 Score=278.71 Aligned_cols=403 Identities=15% Similarity=0.094 Sum_probs=299.4
Q ss_pred hhHHHHHHHHHHHHHcC-CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccccc
Q 009130 11 SKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFL 88 (543)
Q Consensus 11 ~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~ 88 (543)
+||.+++..++...+.. +.-++++..|.+.+|.++|.+|++.+.+++.+.+. .....|.++||.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~n------------- 92 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSN------------- 92 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCC-------------
Confidence 44445443333333322 34588999999999999999999999898888886 5668999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhh
Q 009130 89 RGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFV 167 (543)
Q Consensus 89 ~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~ 167 (543)
+|..+.+|+++.++..++ .++.++ .+.+.++.+++|+.+|+..|++..++++||| +|||+..++.++..
T Consensus 93 --pr~fm~~gLilsai~nil-----~Gfs~s---~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~sh 162 (448)
T COG2271 93 --PRYFMAFGLILSAIVNIL-----FGFSPS---LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSH 162 (448)
T ss_pred --CceeehHHHHHHHHHHHH-----HhhhhH---HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhh
Confidence 999999999999999999 666555 8999999999999999999999999999998 68999999999999
Q ss_pred hhhHHHHHHHH--HHhcCCCchhHHHHHHH-HHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 168 GLSGAVLTQVY--KTVCNGNPSTYILVLAL-LPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 168 ~lg~~i~~~l~--~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
++|+.+.+++. ..+....+|+.-++... +..+++++.....++.|++.+
T Consensus 163 NiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~G---------------------------- 214 (448)
T COG2271 163 NIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEG---------------------------- 214 (448)
T ss_pred hcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccC----------------------------
Confidence 99999999999 77776667776665443 444444444444444332100
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
.++.|++. .|+...++ .+++.+.....+.-.+.
T Consensus 215 ----------------------------LP~ie~~~---------~d~~e~~~----------~~~~~~~ls~~~i~~~Y 247 (448)
T COG2271 215 ----------------------------LPPIEEYR---------GDPLEIYE----------EEKENEGLTAWQIFVKY 247 (448)
T ss_pred ----------------------------CCCHHHhh---------cCchhhhh----------hhccCCCccHHHHHHHH
Confidence 01111111 00000000 00000001112233456
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 325 AMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 325 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
+++||..|.++++.++....-+++..|.|.|+.+ .|+|..++++..+++-+++..|.+++||+|||+-+. +|.+..
T Consensus 248 VL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkg---rR~p~~ 324 (448)
T COG2271 248 VLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKG---RRGPMA 324 (448)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccc---ccchHH
Confidence 7899999999999999999999999999999966 599999999999999999999999999999999653 445566
Q ss_pred HHHHHHHHHHHHHHh-hcC--cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhh-hhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIA-SGF--PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPV-GSYICSVRII 479 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~-~~~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~i-g~~i~~~~l~ 479 (543)
++.++...++.+.+. .++ .....+..+++|+..-+..-+....+.|..|++..|++.|+....+.+ |. ..+....
T Consensus 325 ~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga-~~a~~~~ 403 (448)
T COG2271 325 LIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGA-ALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhH-HhcCCcc
Confidence 666666666655554 222 244555666777765554555666788999999999999999998888 55 5777788
Q ss_pred hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 009130 480 GRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 480 g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
|++.|..| |...|++..+.++++.++.+.+.+++++
T Consensus 404 g~i~d~~g------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 404 GYIADTWG------------WDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred eeeEecCC------------CcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 89888876 9999999998888888887777655444
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.3e-33 Score=293.82 Aligned_cols=395 Identities=13% Similarity=0.020 Sum_probs=264.0
Q ss_pred CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHH
Q 009130 28 TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGY 106 (543)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~ 106 (543)
....+++..|.+.+|+|++..|.+++.+.+.+++. .+++.|.++||+| +|+++..+.++++++.
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g---------------~r~~l~~~~~~~~~~~ 108 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKN---------------TKQFLPFLLILSAICM 108 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccC---------------ccchHHHHHHHHHHHH
Confidence 45677888999999999999999988888888876 7889999999999 9999999999998888
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC-
Q 009130 107 FLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG- 184 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~- 184 (543)
+++++..++.+++ ++.+++.|+++|++++...+...+++++|+| ++||+++|+...+.++|+++++++...+.+.
T Consensus 109 ~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 109 LGFGASLGSGSVS---LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHHHhcccch---HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 8866655565665 8999999999999999999999999999998 6799999999999999999998877655432
Q ss_pred --CchhHHHHH-HHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Q 009130 185 --NPSTYILVL-ALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILL 261 (543)
Q Consensus 185 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (543)
.+|+..+.. +.+..+++++...+
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~~~~~------------------------------------------------------ 211 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFIGLRY------------------------------------------------------ 211 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHh------------------------------------------------------
Confidence 134433322 22211111111111
Q ss_pred HHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhh
Q 009130 262 LLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCG 341 (543)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~ 341 (543)
.+++|++.+..+++ + ..++ +.+++++. .+++ +....+.-.++.++++.+|..++..++.
T Consensus 212 ----------~~~~p~~~~~~~~~---~---~~~~-~~~~~~~~---~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 270 (467)
T PRK09556 212 ----------GSDSPEELGWGKAE---E---IFGE-PISEEDKE---TEST-DMTKWQIFVEYVLKNPVIWLLCFANIFL 270 (467)
T ss_pred ----------CCCChhhcCCCChh---h---cccC-ccchhhhc---cccc-cCcHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 11222211100000 0 0000 00000000 0000 0000001123478999999999888887
Q ss_pred hchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHH--HHHh
Q 009130 342 MGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGH--IAIA 418 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~--~~~~ 418 (543)
.........|.|.|+++ .|+|..+++...+...++..+++++.|+++||+++| +.+........++. ..+.
T Consensus 271 ~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r------~~~~~~~~~~~~~~~~~~~~ 344 (467)
T PRK09556 271 YIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR------RALVACIALALIIFTLGVYQ 344 (467)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------chHHHHHHHHHHHHHHHHHH
Confidence 77777788899988865 799999999999999999999999999999999764 22222222222221 1222
Q ss_pred h-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhh-hhhhhhhhhhhhhhhhccCCCCccccc
Q 009130 419 S-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPV-GSYICSVRIIGRIYDRVASGEDHTCYG 496 (543)
Q Consensus 419 ~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~i-g~~i~~~~l~g~l~~~~g~~~~~~~~~ 496 (543)
. .+....++..++.|++..+........+.|.+|++++|++.|+.+....+ |+ .++|.+.|++.|...+......+.
T Consensus 345 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~-~~~~~~~G~i~~~~~~g~~~~~~~ 423 (467)
T PRK09556 345 HATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGD-SFAKVGLGMIADPTKNGTPIFGYT 423 (467)
T ss_pred hcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhH-HHHhhhHHHHhccccccccccccc
Confidence 2 23333445555666543333333345677999999999999999988886 55 488999999999211000000011
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 497 THCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 497 ~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
..+|+..|++..++.+++.++.+.+.
T Consensus 424 ~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 424 LTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 23499999999888888877766554
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-34 Score=294.27 Aligned_cols=428 Identities=15% Similarity=0.174 Sum_probs=323.0
Q ss_pred cchhhHHHHHHHHHHHHH-cCCccccccccHHHHhhcCCChhhHHHHHHHhhhc-ccccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQCS-VGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMG-GSAGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
..-+.|.+++++++.+.. .|..++++++.+.++++++-+.+|++|+.+..... ...+++.+.+.||||
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg---------- 109 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG---------- 109 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC----------
Confidence 344789999999888755 78899999999999999999999999776655544 457999999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHH-HHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLM-CLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~ 164 (543)
.|++.++|.++.++|.++ ++++++ ++++ +.+.++.|+|.|+.+.++..++..||++||+.|+|+..
T Consensus 110 -----~R~v~i~G~~v~~~g~~l-----ssF~~~---i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~ 176 (509)
T KOG2504|consen 110 -----CRTVMIAGGLVAALGLLL-----SSFATS---LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAV 176 (509)
T ss_pred -----chHHHHHHHHHHHHHHHH-----HHHHhh---HHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhh
Confidence 999999999999999999 889988 6666 55899999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCccc-chhhhhHHHHHHHHHHHHHHHHHHh
Q 009130 165 GFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDD-KKHLNAFSAVAMTLAAYFMVITVME 243 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (543)
++.++|.++.|++...+++..+|++.++.-....+..+.....+++...+.... .+..+.
T Consensus 177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~------------------- 237 (509)
T KOG2504|consen 177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN------------------- 237 (509)
T ss_pred ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc-------------------
Confidence 999999999999999999999998877776666666666656666533221100 000000
Q ss_pred hcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCC-CCCCccccCCCccchhcccccccchhhcchh-
Q 009130 244 NLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQ-DPLAYHELADDESKVTAAFDDKILKDEEDMN- 321 (543)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 321 (543)
.....+....+. +...+++ .+..+.. ...+++..+.+++......+...
T Consensus 238 ---------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 288 (509)
T KOG2504|consen 238 ---------------------------SAASVESTPKPV-ELRISERDSGLKKLS-LSNLATLKRGPDKWRNSPLQAFLS 288 (509)
T ss_pred ---------------------------cccccccccccc-ccccccCCCCCCccc-ccchhhhhhCCccccccchhhhhh
Confidence 000000000000 0000000 0000000 00000000000001000111111
Q ss_pred --HHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 322 --LLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 322 --~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
..++++++.|+.+++...+....+.....++|.+.++.|++..+++.+.++.++.+++||++.|+++|+... .+
T Consensus 289 ~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~----~~ 364 (509)
T KOG2504|consen 289 MLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI----RA 364 (509)
T ss_pred hhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc----ch
Confidence 268899999999999999998888888999999999999999999999999999999999999999999853 34
Q ss_pred hHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRI 478 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l 478 (543)
..+..++.+...++..... ..+...+....+++|++.|...+..+.++.|+.+.++...++|+..+..+++. +++|++
T Consensus 365 ~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~-l~gpPi 443 (509)
T KOG2504|consen 365 LVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA-LVGPPI 443 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH-HcCccc
Confidence 4566666666666665444 34556678888999999999998888899999999999999999999999998 589999
Q ss_pred hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 479 IGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 479 ~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
.|++.|.+++ |...|+..++..+++..+.++..
T Consensus 444 ag~~~d~tg~-----------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 444 AGLLYDITGN-----------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ceeeeeccCC-----------eeeehhhcChHHHHHHHHHHHhH
Confidence 9999999985 99999999999998887766655
No 5
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.9e-33 Score=288.59 Aligned_cols=401 Identities=12% Similarity=0.079 Sum_probs=283.1
Q ss_pred ccchhhHHHHHHHHHHHHH-cCCccccccccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhccccccccccc
Q 009130 7 LSTNSKWIATVASIWIQCS-VGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTR 84 (543)
Q Consensus 7 ~~~~~~w~~~~~~~~~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~ 84 (543)
+...++|.++.++++.... .+..+.++.+.|.+.+++|++.++.+++.+.+.+.. ..+++.|++.||+|
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g--------- 82 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFG--------- 82 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcC---------
Confidence 4456789888777765543 445577888999999999999999996666655544 47889999999999
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHH-HHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHH
Q 009130 85 TRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMC-LFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGIL 163 (543)
Q Consensus 85 ~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~ 163 (543)
||++++.+.+++.+++++ ++++++ ++.++ ..|+++|++.+...++...++.+|||++|++++|+.
T Consensus 83 ------~r~~l~~~~~~~~~~~~~-----~~~~~~---~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~ 148 (455)
T TIGR00892 83 ------CRPVVIAGGLLASLGMIL-----ASFSSN---VIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLA 148 (455)
T ss_pred ------chHHHHhhHHHHHHHHHH-----HHHhhh---HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999998888 666666 56665 467999999998777777888999998999999999
Q ss_pred HHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHh
Q 009130 164 KGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVME 243 (543)
Q Consensus 164 ~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (543)
..+..+|..+++++.+.+.+..+|++.++...+..++..+...+.++.+.
T Consensus 149 ~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~------------------------------ 198 (455)
T TIGR00892 149 MAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGP------------------------------ 198 (455)
T ss_pred HhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCc------------------------------
Confidence 99999999999999988887778888777666544433222222211100
Q ss_pred hcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHH
Q 009130 244 NLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLL 323 (543)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (543)
.++..+ +++++..++ + .+.++. +.....++..+....
T Consensus 199 -------------------------------~~~~~~---~~~~~~~~~---~--~~~~~~----~~~~~~~~~~~~~~~ 235 (455)
T TIGR00892 199 -------------------------------SQRVSK---SKSKEGLPP---D--GSTKKL----SKKSTAEKINRFLDF 235 (455)
T ss_pred -------------------------------cccccc---ccccccCCC---C--Cccccc----cccchhhhhhhhcch
Confidence 000000 000000000 0 000000 000000000111113
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
+.+++|.++...+..++.....+....+++.+.++.|+++.+++...++.+++.++++++.|+++||...+. .|+..+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~ 313 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP--HVQYLF 313 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH--HHHHHH
Confidence 578899999888777766666666677888888889999999999999999999999999999999742210 122233
Q ss_pred HHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
..+.+...+++++.. ..+.+.+++..++.|++.+...+...+++.|.+|++++++++|+.+....+|. +++|.+.|.+
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~-~igp~i~G~l 392 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAV-LIGPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHH-Hccccceeee
Confidence 333333333333333 34555566778888999988888888999999999999999999999999998 4899999999
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHHHH
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
.|..++ |+..|++.+++.+++.+.
T Consensus 393 ~~~~g~-----------~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 393 VDATKN-----------YKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ehhcCC-----------cchHHHHhhHHHHHHHHH
Confidence 998763 888998888776666553
No 6
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=6.5e-33 Score=280.60 Aligned_cols=369 Identities=20% Similarity=0.225 Sum_probs=280.3
Q ss_pred hHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCC
Q 009130 12 KWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRG 90 (543)
Q Consensus 12 ~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g 90 (543)
+|.+++.+....+..+..|+++.+.|.+.+|+|+++.+.+++.+.+.++.. .+++.|.+.||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G--------------- 66 (377)
T TIGR00890 2 WWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFG--------------- 66 (377)
T ss_pred eEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcC---------------
Confidence 455555555555667778889999999999999999999988788787776 7889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhh
Q 009130 91 PWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLS 170 (543)
Q Consensus 91 ~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg 170 (543)
||+++..+.++.+++.++ ++++++ ++.+++.|++.|++.+..++.....+.+|+|++|++++++...+.++|
T Consensus 67 ~r~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 67 PRAVAMLGGILYGLGFTF-----YAIADS---LAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLG 138 (377)
T ss_pred ccchhHHhHHHHHHHHHH-----HHHHHH---HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchh
Confidence 999999999999999988 666666 799999999999999998888888899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHH-hheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccch
Q 009130 171 GAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFM-SHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFS 249 (543)
Q Consensus 171 ~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (543)
..+++++...+.+..+|++.++...+..++..+.. .+.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~---------------------------------------- 178 (377)
T TIGR00890 139 SFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG---------------------------------------- 178 (377)
T ss_pred HhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee----------------------------------------
Confidence 99988888887776778877766554433321111 1111
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcch
Q 009130 250 LWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTG 329 (543)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (543)
+++++++ + +++ +. +.++.+.++.++++
T Consensus 179 ------------------------~~~~~~~---~--------------~~~---------~~---~~~~~~~~~~~~~~ 205 (377)
T TIGR00890 179 ------------------------YPPGQLI---K--------------TNI---------EV---SVKDYTVWEMLRTP 205 (377)
T ss_pred ------------------------cCchhcc---c--------------cCc---------cc---chhhhhHHHHHcCc
Confidence 1110000 0 000 00 00112345678889
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVA 409 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~ 409 (543)
.+|.+.+..++..........+.+++.++.|.++.+.+...++..++..+++++.|+++||++|| +.+..+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~------~~~~~~~~~ 279 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ------KTMSIVFGI 279 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hhhhHHHHH
Confidence 98888777666555555555666777788899988899999999999999999999999999654 456666666
Q ss_pred HHHHHHHHhh-cCcc--hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 410 MSIGHIAIAS-GFPG--NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 410 ~~i~~~~~~~-~~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
..++.+++.. ++.. ..+...++.|++.+...+..+.++.|.+|+++++++.|+.+....+|. .++|.+.|.+.|..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 280 SAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAG-IFGGLIASHALTEI 358 (377)
T ss_pred HHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHH-HHHHHHHHHHHhhh
Confidence 6666554442 2222 233445667888887777788899999999999999999999999998 48999999999987
Q ss_pred cCCCCccccccchhHHHHHHHHHHHHHHH
Q 009130 487 ASGEDHTCYGTHCFMLSFMIMAFVAFFGS 515 (543)
Q Consensus 487 g~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 515 (543)
| |+..|++.+++.+++.
T Consensus 359 g------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 359 G------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred c------------hhhHHHHHHHHHHHhc
Confidence 7 9999988877666654
No 7
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=272.49 Aligned_cols=358 Identities=10% Similarity=0.036 Sum_probs=266.5
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.++.++..|.+++|+|+|.+|.+++.+.+.+++. .+++.|++.||+| ||+++..+.++++++.+
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G---------------~r~~l~~~~~l~~~~~~ 89 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVS---------------ERRSVAISLLLIAVGAL 89 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhC---------------chHHHHHHHHHHHHHHH
Confidence 3668899999999999999999988777777775 6889999999999 99999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC-c
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN-P 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~-~ 186 (543)
+ ++++++ ++.+++.|+++|+|.+...+.....+.+|||+||++++|+..++..+|..+++.+...+.+.. .
T Consensus 90 ~-----~~~a~~---~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~ 161 (393)
T PRK09705 90 M-----RELYPQ---SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSET 161 (393)
T ss_pred H-----HHHCcc---hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9 888887 788999999999999999998889999999989999999999999999999998888776543 5
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|++.+....++.++.+.. ..
T Consensus 162 w~~~~~~~~~~~~~~~~~------------------------------------------------------------~~ 181 (393)
T PRK09705 162 WYQTLAWWALPAVVALFA------------------------------------------------------------WW 181 (393)
T ss_pred HHHHHHHHHHHHHHHHHH------------------------------------------------------------HH
Confidence 655443322221111000 00
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
+ ..++++++ + + +++ .+.++.++++.+|.+.+..++......
T Consensus 182 ~---~~~~~~~~-~------------------~----------~~~-------~~~~~~l~~~~~~~l~~~~~~~~~~~~ 222 (393)
T PRK09705 182 W---QSAREVAS-S------------------H----------KTT-------TTPVRVVFTPRAWTLGVYFGLINGGYA 222 (393)
T ss_pred H---HhcCCCcc-c------------------c----------CCC-------cCCcccccCHhHHHHHHHHHHHHHHHH
Confidence 0 00000000 0 0 000 001234566777777776666666666
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
....+.|.++++.|.+..+++...+++.+++.+|+++.|++.||+++| +.+..+..+..++..++. .+....
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~- 295 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR------KLLMLALVLQLVGFCGFIWLPLQLP- 295 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch------HHHHHHHHHHHHHHHHHHHccchHH-
Confidence 778889999988999999999999999999999999999999998643 455556555555554433 222111
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcC-CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFG-VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
....++.|++.+..++.......+.++ ++++++++|+.+....++. .++|.+.|++.|..|+ |...|
T Consensus 296 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~-~~gp~~~G~l~~~~g~-----------~~~~~ 363 (393)
T PRK09705 296 VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIA-GLAPWFSGVLRSISGN-----------YLMDW 363 (393)
T ss_pred HHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCC-----------chHHH
Confidence 222345677777777776666677775 5678999999988888887 4899999999999874 88899
Q ss_pred HHHHHHHHHHHHHHHHHhhcchh
Q 009130 505 MIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
++.++.+++..++.+.+.+|++.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 364 AFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHHHHhcccccc
Confidence 99888888777776666655543
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.3e-31 Score=276.25 Aligned_cols=379 Identities=13% Similarity=0.085 Sum_probs=261.5
Q ss_pred CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHH
Q 009130 28 TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGY 106 (543)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~ 106 (543)
..+.++.+.|.+.+++|+|..+.+++.+.+.++.. .+++.|++.||+| ||+++.++.++++++.
T Consensus 38 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g---------------~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 38 TRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSN---------------ARYFMGIGLIATGIIN 102 (434)
T ss_pred hhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcC---------------CchhHHHHHHHHHHHH
Confidence 34567888899999999999999977777777765 7889999999999 9999999999999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC
Q 009130 107 FLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN 185 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~ 185 (543)
++ .+.+++ ++.+++.|++.|++.|..++.....+.+|+| ++||+++++...+.++|.++++++.+.+.+..
T Consensus 103 ~~-----~~~~~~---~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 103 IL-----FGFSSS---LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HH-----HHHHhH---HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88 666665 7888999999999999888988999999998 57999999999999999999999999888777
Q ss_pred chhHHHHHHHHHHHHH-HHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHh
Q 009130 186 PSTYILVLALLPTLVS-LLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLL 264 (543)
Q Consensus 186 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (543)
+|++.+....+..++. +....++++
T Consensus 175 gw~~~f~~~~i~~~~~~~~~~~~~~~------------------------------------------------------ 200 (434)
T PRK11663 175 GWRYGMMIAGIIAIVVGLFLCWRLRD------------------------------------------------------ 200 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCC------------------------------------------------------
Confidence 8888876655443322 221112221
Q ss_pred hcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhH-HHhhcchhHHHHHHHHHhhhc
Q 009130 265 ASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNL-LQAMCTGNFWFLCIATLCGMG 343 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~l~~~~~~~ 343 (543)
+|++... ++.++.+++ .++.+++ ++. ++.+.+... ...++++.+|.+.+..++...
T Consensus 201 ----------~p~~~~~-~~~~~~~~~----~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK11663 201 ----------KPQAMGL-PSVGEWRHD----ALELAQQ-------QEG-AGLSRKEILTKYVLLNPYIWLLSFSYVLVYV 257 (434)
T ss_pred ----------CHhhcCC-CCccccccc----ccccchh-------ccc-cCCChhhhHHHHHhcChHHHHHHHHHHHHHH
Confidence 1111000 000000000 0000000 000 000000111 236788999988887776666
Q ss_pred hhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHH---HHHHHHHHHHHHhh
Q 009130 344 SGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVI---TLVAMSIGHIAIAS 419 (543)
Q Consensus 344 ~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~---~~~~~~i~~~~~~~ 419 (543)
....+..++|.+++ +.|++..+++...+.+.+++.+++++.|+++||+.++ +|+..... +.+...+++.....
T Consensus 258 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~---~r~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK11663 258 VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG---NRGPMNLIFAAGILLSVGSLWLMPF 334 (434)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC---CccHHHHHHHHHHHHHHHHHHHccc
Confidence 66667778899885 5699999999999999999999999999999999544 22222211 22212222211212
Q ss_pred cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccch
Q 009130 420 GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHC 499 (543)
Q Consensus 420 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~ 499 (543)
.+........+..|++..+........+.|.+|+++++++.|+.+....+|. .++|.+.|++.|..|
T Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~p~~~g~l~~~~g------------ 401 (434)
T PRK11663 335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGA-ALSGYPLAKVLEIWH------------ 401 (434)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHH-HHhcccHHHHHHhcc------------
Confidence 2222222223333433222233344567899999999999999999999998 489999999999877
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Q 009130 500 FMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
|+..|++.+++.+++++..+...
T Consensus 402 ~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 402 WTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777766554443
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.1e-31 Score=270.62 Aligned_cols=389 Identities=12% Similarity=0.046 Sum_probs=277.7
Q ss_pred Ccccc-cccchhhHHHHHHHHHHHHHcC-CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccc
Q 009130 1 MRMEE-RLSTNSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLN 77 (543)
Q Consensus 1 ~~~~~-~~~~~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~ 77 (543)
|.|+. .+..+++|.++..+.+..+..+ ..+..+...|.+.+|+|+++.+.+++.+...++.. .+++.|++.||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-- 78 (406)
T PRK11551 1 MSTRTSSASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIG-- 78 (406)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 45543 3566688988877776666544 35678888999999999999999988777777775 6789999999999
Q ss_pred cccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCC
Q 009130 78 HHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYS 156 (543)
Q Consensus 78 ~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~r 156 (543)
||+++..+.++.+++.++ +.++++ ++.+++.|+++|++.+...+.....+.|++| ++|
T Consensus 79 -------------~r~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 137 (406)
T PRK11551 79 -------------RKRILIVSVALFGLFSLA-----TAQAWD---FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLR 137 (406)
T ss_pred -------------CchhHHHHHHHHHHHHHH-----HHHhcc---HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH
Confidence 999999999998888877 566666 7889999999999999999999999999998 689
Q ss_pred cchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHH-HHhheeccCCCCcccchhhhhHHHHHHHHHHH
Q 009130 157 GTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLL-FMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAY 235 (543)
Q Consensus 157 g~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (543)
++++++...+..+|..+++.+...+.+...|++.+.+..+..++... ...+++
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------------------- 191 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLP-------------------------- 191 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCC--------------------------
Confidence 99999999999999999998887776666777766554433222111 111111
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccch
Q 009130 236 FMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILK 315 (543)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (543)
++++..++ + + .++ ++++
T Consensus 192 --------------------------------------~~~~~~~~--~------~-------~~~--------~~~~-- 208 (406)
T PRK11551 192 --------------------------------------ESRAFAQA--A------G-------AGK--------QRAP-- 208 (406)
T ss_pred --------------------------------------CChhHHhc--c------C-------cch--------hhhh--
Confidence 11110000 0 0 000 0000
Q ss_pred hhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhc
Q 009130 316 DEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKL 395 (543)
Q Consensus 316 ~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~ 395 (543)
......+..+.+..+.+.+..++.....+....+.|.+.++.|+++.+.+...+...++..+++++.|+++||+++|
T Consensus 209 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~- 285 (406)
T PRK11551 209 --VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR- 285 (406)
T ss_pred --hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-
Confidence 00000011112223333333444334445566778999999999999999999999999999999999999999654
Q ss_pred CCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhh
Q 009130 396 GWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYIC 474 (543)
Q Consensus 396 ~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~ 474 (543)
+.+..+.+...++++.+. .++...+.+..++.|++.++..+..++++.|.+|+++++++.|+.+....++.. +
T Consensus 286 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-~ 359 (406)
T PRK11551 286 -----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSM-A 359 (406)
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHH-H
Confidence 444444444444444443 334444555666778877777788888999999999999999999999999984 8
Q ss_pred hhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 475 SVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 475 ~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+|.+.|.+.|..+ ++...++....+.+++.++.+.+
T Consensus 360 g~~~~g~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 360 GPLLAGQLLALGR-----------STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HhhhHhhhhccCC-----------chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998765 37777777776666666555544
No 10
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.2e-30 Score=270.28 Aligned_cols=416 Identities=13% Similarity=0.138 Sum_probs=264.5
Q ss_pred chhhHHHHHHHHHHHHHcC-CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccc
Q 009130 9 TNSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTR 86 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~ 86 (543)
++++|.++....+...... ..++++...|++.++ |+++.+.+++.+.+.++.. .+++.|++.||+|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g----------- 91 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN----------- 91 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccC-----------
Confidence 3345665444433332221 234467778999988 9999999977777777765 7889999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHH
Q 009130 87 FLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKG 165 (543)
Q Consensus 87 ~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~ 165 (543)
+|+++.++.++.+++.+++++.. ..+.+ ++.+++.|++.|++.+..++.....+.+|+| ++|++++|+...
T Consensus 92 ----~k~~l~~~~~~~~i~~~~~~~~~-~~~~~---~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 163 (452)
T PRK11273 92 ----PRVFLPAGLILAAAVMLFMGFVP-WATSS---IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNC 163 (452)
T ss_pred ----CchhHHHHHHHHHHHHHHHHhhh-ccccc---HHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHH
Confidence 99999999999999888833211 01123 7788889999999999888878888899998 679999999999
Q ss_pred hhhhhHHHHHHHHH-HhcCCCchhHHHHHHHHHHHHH-HHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHh
Q 009130 166 FVGLSGAVLTQVYK-TVCNGNPSTYILVLALLPTLVS-LLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVME 243 (543)
Q Consensus 166 ~~~lg~~i~~~l~~-~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (543)
+.++|+.+.+++.. .+....+|++.+....++.++. ++...++++
T Consensus 164 ~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~--------------------------------- 210 (452)
T PRK11273 164 AHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRD--------------------------------- 210 (452)
T ss_pred HHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccC---------------------------------
Confidence 99998766555432 3322346666665544333222 222222221
Q ss_pred hcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHH
Q 009130 244 NLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLL 323 (543)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (543)
++++... ++.++.+.+. +++..++ +.++ .+..+.-..
T Consensus 211 -------------------------------~~~~~~~-~~~~~~~~~~--~~~~~~~-------~~~~--~~~~~~~~~ 247 (452)
T PRK11273 211 -------------------------------TPQSCGL-PPIEEYKNDY--PDDYNEK-------HEQE--LTAKQIFMQ 247 (452)
T ss_pred -------------------------------CHhhcCC-CChhhhhhcc--ccccccc-------cCCC--ccHHHHHHH
Confidence 1111000 0000000000 0000000 0000 000001113
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
..+|++.+|...+..++.....+....++|.++++ .|++..+++....++.++..+++++.|+++||+++++ |...
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r---~~~~ 324 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGN---RGAT 324 (452)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC---cchH
Confidence 46789999998888877766667778899999976 5999999999999999999999999999999996431 1222
Q ss_pred HHHHHHHHHHHHHHHh--h-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA--S-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII 479 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~--~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~ 479 (543)
......+..++.+++. . .+.....+..++.|.+...........+.|.+|++++|++.|+.+....+|+.+.+|.+.
T Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~ 404 (452)
T PRK11273 325 GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 404 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH
Confidence 2222222222222222 1 122223333444454433323334456779999999999999998877787655678899
Q ss_pred hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHH
Q 009130 480 GRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRFYNQVVIR 535 (543)
Q Consensus 480 g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 535 (543)
|.+.|..| |+..|++.++.++++++....+.+-+||+..|..+|
T Consensus 405 g~l~~~~g------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (452)
T PRK11273 405 GYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQK 448 (452)
T ss_pred HHHHHHhc------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhh
Confidence 99999987 999999999888888777666554443333333333
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.3e-31 Score=273.87 Aligned_cols=393 Identities=11% Similarity=0.033 Sum_probs=267.1
Q ss_pred hhhHHHHHHHHHHHHH-cCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccc
Q 009130 10 NSKWIATVASIWIQCS-VGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRF 87 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~ 87 (543)
|.+|.+++...+...+ .......+...|.+++|+|+++.+++++.+.+.+++. .+++.|++.||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G------------ 71 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIG------------ 71 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC------------
Confidence 3456655555554444 3345667888899999999999999988888787775 7889999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHh
Q 009130 88 LRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGF 166 (543)
Q Consensus 88 ~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~ 166 (543)
||+++..+.++++++.++ ++++++ ++.+++.|+++|++.+...+....+++||+| ++||+++++...+
T Consensus 72 ---~r~~~~~~~~~~~~~~~~-----~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 140 (412)
T TIGR02332 72 ---ARRWIAGIMVLWGIASTA-----TMFATG---PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIA 140 (412)
T ss_pred ---hHHHHHHHHHHHHHHHHH-----HHHhcC---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999 777776 7899999999999999998888889999999 5799999999999
Q ss_pred hhhhHHHHHHHHHHhcC------CCchhHHHHHHHHHHHHHHH-HHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHH
Q 009130 167 VGLSGAVLTQVYKTVCN------GNPSTYILVLALLPTLVSLL-FMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVI 239 (543)
Q Consensus 167 ~~lg~~i~~~l~~~l~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (543)
.++|.++++++++.+.+ ..+||+.++...++.++..+ ..+++++.|++. ++.... .
T Consensus 141 ~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~----~~l~~~---~---------- 203 (412)
T TIGR02332 141 MPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA----KWLDEE---D---------- 203 (412)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC----CCCCHH---H----------
Confidence 99999999999888763 24799888886666554333 333344433211 000000 0
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcc
Q 009130 240 TVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEED 319 (543)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (543)
++..+++. ++. +...+ ++ + ++ .++++. ...
T Consensus 204 ---------------------------------~~~~~~~~--~~~-----~~~~~--~~-~-~~-----~~~~~~-~~~ 233 (412)
T TIGR02332 204 ---------------------------------KKALKEMI--DND-----QLTLE--QP-E-GA-----FAHAAM-PQR 233 (412)
T ss_pred ---------------------------------HHHHHHHH--Hhc-----ccccc--cc-c-cc-----cccccc-cHH
Confidence 00000000 000 00000 00 0 00 000000 001
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhh--CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCC
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESL--HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW 397 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~ 397 (543)
..+++ ++++.+|...+.+++.....+.+..++|.++++. |+++.+++.......++..+|++++|+++||+++|
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r--- 309 (412)
T TIGR02332 234 SMLRE-IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER--- 309 (412)
T ss_pred HHHHH-hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc---
Confidence 12233 3468899888888887777888889999999875 67888889999999999999999999999999753
Q ss_pred CchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 398 ARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 398 ~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
+..+....+...+++.+.. ..++...+....+.+++.....+.......|.+|++++++++|+.+....+|. .++|
T Consensus 310 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~-~~~p 386 (412)
T TIGR02332 310 --KHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGS-ALSP 386 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhh-hhhh
Confidence 2223333333333332222 22222222222233333322233334455678999999999999999999998 4899
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFV 510 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~ 510 (543)
.+.|.+.|..|+ |+.+|++.+++
T Consensus 387 ~~~g~i~~~~g~-----------~~~~~~~~~~~ 409 (412)
T TIGR02332 387 FLIGILKDATGS-----------FNSGLWFVAAL 409 (412)
T ss_pred hhcccccccCCC-----------CchhHHHHHHH
Confidence 999999998863 88888876654
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.4e-29 Score=246.41 Aligned_cols=356 Identities=13% Similarity=0.080 Sum_probs=278.1
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
-|...-+.|++.+|+++|..+.|+..+.+.+++. .+++...+.||+. ||++++....++.++.+
T Consensus 29 Efv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~---------------Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 29 EFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLE---------------RRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc---------------hHHHHHHHHHHHHHHHH
Confidence 4666778899999999999999966566666654 7889999999999 99999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
+ +++++| |+.+++.|++.|+..|..++....+..+..| +||+++++++.++..++.+++.|++.++-+..+
T Consensus 94 l-----~alAp~---f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 94 L-----SALAPS---FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred H-----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 9 999998 8999999999999999999999999999997 799999999999999999999999999988888
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
||+.|.+.....++.++..+...+
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP-------------------------------------------------------- 189 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP-------------------------------------------------------- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------------------
Confidence 988887766555444333222111
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
|++.+ ++++....+..+.+|+|+.|...+..++.....+
T Consensus 190 ---------~~~~~--------------------------------~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F 228 (394)
T COG2814 190 ---------PSEIS--------------------------------GSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHF 228 (394)
T ss_pred ---------CccCC--------------------------------CCCCcchhHHHHHhcCchHHHHHHHHHHHHcchh
Confidence 00000 0000111234788999999999999998888888
Q ss_pred hhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h-cCcc
Q 009130 347 ATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-S-GFPG 423 (543)
Q Consensus 347 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~-~~~~ 423 (543)
....|+.+++++ .|+|.+..++....++++..+|..++|+++|| +.+ ..+.....++.+.++.+. . .++.
T Consensus 229 ~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~------~~l~~~~~l~a~~~l~l~~~~~~~~ 301 (394)
T COG2814 229 ALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR------RALIAALLLLALALLALTFTGASPA 301 (394)
T ss_pred hhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch------hHHHHHHHHHHHHHHHHHHhcchHH
Confidence 888888888876 59999999999999999999999999999999 433 345555555555555444 2 3333
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
...+..++.|+..+..........++ .-+++...+.++...+.++|-. .|..++|.+.|..| |...
T Consensus 302 ~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia-~GA~lGG~v~~~~g------------~~~~ 367 (394)
T COG2814 302 LALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIA-LGAALGGLVLDALG------------YAAT 367 (394)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhc------------hHHH
Confidence 44444555666666655555555566 4458888888888888888874 78889999999976 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 009130 504 FMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
.++.+.+.+++.++.+...+++
T Consensus 368 ~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 368 GWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998888888776655433
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.98 E-value=6.3e-30 Score=256.30 Aligned_cols=351 Identities=12% Similarity=0.012 Sum_probs=247.7
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
..++...|.+++|+|+|+.|.+++.+.+.+++. .+++.|++.||+| ||+++..+.+....+...
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~g---------------rr~~~~~~~~~~~~~~~~ 72 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAF---------------KRWFLFGSLATFAAAAGR 72 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------------chHHHHHHHHHHHHHHHH
Confidence 456778899999999999999988888788776 7889999999998 998876655554444322
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
....++ ++.+++.|+++|+|++. .++....+++|+| ++|++++++...+.++|.+++++++..+.+..+|
T Consensus 73 -----~~~~~~---~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW 143 (368)
T TIGR00903 73 -----LLDPFN---YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGL 143 (368)
T ss_pred -----HHHhcc---HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch
Confidence 122244 89999999999999996 4556666799998 7899999999999999999999999988877889
Q ss_pred hHHHHHHHHHHHH-HHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 188 TYILVLALLPTLV-SLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 188 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|+.++...++.++ .++...+++
T Consensus 144 r~~f~~~~~l~~~~~~~~~~~lp--------------------------------------------------------- 166 (368)
T TIGR00903 144 QLLIIPIAAVAAAGIILVLAALP--------------------------------------------------------- 166 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---------------------------------------------------------
Confidence 8887764433322 221111111
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
++|++++ + . . +. ++....+++++++|.+|.+.+..++.....+
T Consensus 167 -------~~p~~~~----------------~-~-~---------~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 209 (368)
T TIGR00903 167 -------ALPFQAA----------------E-G-F---------GF---KDAVKEFGALAGRKDLWIIGAILGFGVALFD 209 (368)
T ss_pred -------CCCCCCC----------------C-C-c---------ch---HHHHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 1111000 0 0 0 00 0001235788999999999999999988899
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
.+..|+|+++++.|++.+ .+....+..+.+.++ .++++||..||. .|+.......++.++.+..+. ..++...
T Consensus 210 ~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~--~r~~~~~~~~~~~a~~~~~~~~~~~~~~~ 283 (368)
T TIGR00903 210 NLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAG--LRSIYIRAAALLIAAFFLALAFELNRLAL 283 (368)
T ss_pred HHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhh--hHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 999999999998888864 566666666655555 489999987652 223323323333344443333 2233333
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
.....+.+++.....+...++.+|.+|++.|+++.|+.+..+.+++. ++|++.+.+.. + .+..|.
T Consensus 284 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~-~~~~~~~~~~~--~------------~~~~f~ 348 (368)
T TIGR00903 284 FAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISV-ALALAAMLFIS--S------------AEAYFT 348 (368)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHH-HHHHHHHHHhc--C------------HHHHHH
Confidence 44445566667767777888999999999999999999999999984 77777776663 3 667788
Q ss_pred HHHHHHHHHHHHHH
Q 009130 506 IMAFVAFFGSLVAF 519 (543)
Q Consensus 506 ~~~~~~~~~~i~~~ 519 (543)
+.++..+++.+..+
T Consensus 349 ~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 349 FLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777766643
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.3e-29 Score=257.85 Aligned_cols=350 Identities=10% Similarity=-0.006 Sum_probs=260.5
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
+....+.|.+.+|+|.|+.+.+++.+.+.++.. .+++.|.+.||+| ||+++..+.++++++++.
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~~ 90 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVE---------------RRKLLIGLFVLFIASHVL 90 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---------------hHHHHHHHHHHHHHHHHH
Confidence 334456799999999999999987777776665 6889999999999 999999999999999998
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++++++ ++.+++.|+++|++.+...+...+.+.+++| +||++++|+...+.++|.++++++.+.+.+..+|
T Consensus 91 -----~~~~~~---~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 91 -----SALAWN---FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred -----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 777776 8999999999999999888888899999998 6899999999999999999999999888776778
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.+....+..++.......
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~------------------------------------------------------------ 182 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIK------------------------------------------------------------ 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------------------------------------------------
Confidence 77776554433221110000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..+++ ++ + ++. .....++.+|++.++......++.....+.
T Consensus 183 ---~~~~~---~~------------------~----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (390)
T PRK03545 183 ---LLPLL---PS------------------E----------HSG-----SLKSLPLLFRRPALVSLYLLTVVVVTAHFT 223 (390)
T ss_pred ---hCCCC---CC------------------C----------Ccc-----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 00000 00 0 000 011235678888888766655554444444
Q ss_pred hhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH-h-hcCcch
Q 009130 348 TMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAI-A-SGFPGN 424 (543)
Q Consensus 348 ~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~-~-~~~~~~ 424 (543)
...+.+++.++ .|+|+.+++...++..+++.+++++.|+++||+++| .. ..+..+..++...+ . .++...
T Consensus 224 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------~~-~~~~~~~~~~~~~l~~~~~~~~~ 296 (390)
T PRK03545 224 AYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------FL-LIAIALLLVCLLLLLPAANSEWH 296 (390)
T ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh------HH-HHHHHHHHHHHHHHHHHhchHHH
Confidence 55666777766 599999999999999999999999999999998543 33 33333333333322 2 334445
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
+++..++.|++.+...+.....+.+..| ++++.+.|+.+....+|.. +||.+.|.+.|..| ++..|
T Consensus 297 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~G~~~~G~~~~~~g------------~~~~~ 362 (390)
T PRK03545 297 LSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIG-AGALLGNQVSLHLG------------LSSIG 362 (390)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccC------------hhHHH
Confidence 5666777788776666666677777766 6889999999888888874 79999999999987 99999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 009130 505 MIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~ 522 (543)
++.+.+.+++.+..+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 363 YVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999988888877765554
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.9e-29 Score=260.03 Aligned_cols=364 Identities=12% Similarity=0.039 Sum_probs=254.1
Q ss_pred chhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccc
Q 009130 9 TNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTR 86 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~ 86 (543)
.+++|..++.+.+.....+. .+..+...|.+++|+|+++.+.+++.+.+.++.. .+++.|++.||+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g----------- 81 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFG----------- 81 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence 34556555555544444443 3455677799999999999999988777777776 6889999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHH
Q 009130 87 FLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKG 165 (543)
Q Consensus 87 ~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~ 165 (543)
||+++..+.++.+++.++ ++++++ ++.+++.|+++|+|.+..++....++.|++| ++|++++++...
T Consensus 82 ----~r~~l~~~~~~~~~~~~~-----~~~~~~---~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 149 (426)
T PRK12307 82 ----RKPLMMWSIVAYSVGTGL-----SGLASG---VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVS 149 (426)
T ss_pred ----ChHHHHHHHHHHHHHHHH-----HHHHhH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHH
Confidence 999999999999999988 666666 7999999999999999999999999999998 679999999999
Q ss_pred hhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhc
Q 009130 166 FVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENL 245 (543)
Q Consensus 166 ~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (543)
+.++|.++++.+...+.+..+|++.+....++.++.+. +....|+
T Consensus 150 ~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~---~~~~~p~-------------------------------- 194 (426)
T PRK12307 150 GFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIY---IRARAPE-------------------------------- 194 (426)
T ss_pred HHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHH---HHHHCCC--------------------------------
Confidence 99999999999988887777888888765544332111 0000010
Q ss_pred ccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHh
Q 009130 246 LTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQA 325 (543)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (543)
++ ++++ ++ .+ ++.++ ++...+......++.
T Consensus 195 -----------------------------~~-~~~~--~~----~~-----~~~~~---------~~~~~~~~~~~~~~~ 224 (426)
T PRK12307 195 -----------------------------SK-EWEE--AK----LS-----GKGKH---------SQSAWSVFSLSMKGL 224 (426)
T ss_pred -----------------------------Ch-HHHH--hh----hh-----ccccc---------cccchhhhhHHHHHH
Confidence 00 0000 00 00 00000 000001112345677
Q ss_pred hcchhHHHHHHHHH---hhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 326 MCTGNFWFLCIATL---CGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 326 ~~~~~f~~~~l~~~---~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
++++.++....... ...+..+.+..++|.+.++.|+++.+.+...++..++..+++++.|++.||++|| +.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------~~ 298 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK------KT 298 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HH
Confidence 88887765443322 2223333456678888888899999999999999999999999999999999654 45
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhh--hhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVC--YGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII 479 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~--~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~ 479 (543)
+..+.++..+.++.+. ..+.....+..++.+++ ..+..+..+.++.|.+|++++|++.|+.+....+++ .++|.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~-~~gp~~~ 377 (426)
T PRK12307 299 FSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSG-TFNSMAA 377 (426)
T ss_pred HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHH-HHHHHHH
Confidence 5555555544443333 22222222233334432 223345667788999999999999999988888888 4899999
Q ss_pred hhhhhhcc
Q 009130 480 GRIYDRVA 487 (543)
Q Consensus 480 g~l~~~~g 487 (543)
|++.|..|
T Consensus 378 g~l~~~~g 385 (426)
T PRK12307 378 TWLGITMG 385 (426)
T ss_pred HHHHHccc
Confidence 99999876
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=9.7e-30 Score=264.67 Aligned_cols=369 Identities=15% Similarity=0.132 Sum_probs=244.5
Q ss_pred CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHH
Q 009130 28 TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGY 106 (543)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~ 106 (543)
..+.++.+.|.+.+|+|++.++.+++.+.+.+++. .+++.|++.||+| ||+++..+.++++++.
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G---------------~r~~~~~~~~~~~~~~ 115 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYG---------------PRYGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------ChHHHHHHHHHHHHHH
Confidence 35677888899999999999999977777777776 5789999999999 9999999999999988
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhc---
Q 009130 107 FLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVC--- 182 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~--- 182 (543)
++ ++++++ ++.+++.|+++|++.+.. .+....+++|+| ++||+++|+......+|..+++.+...+.
T Consensus 116 ~~-----~~~~~s---~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~ 186 (476)
T PLN00028 116 FC-----MSLVSS---ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLI 186 (476)
T ss_pred HH-----HHHhcC---HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 666666 688888999999988764 445567899998 68999999998777777777665543321
Q ss_pred -CC-----CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHH
Q 009130 183 -NG-----NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIIT 256 (543)
Q Consensus 183 -~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (543)
+. .+||+.+.+..+..++..+...+
T Consensus 187 ~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~------------------------------------------------- 217 (476)
T PLN00028 187 KDAGAPSFTAWRIAFFVPGLLHIIMGILVLT------------------------------------------------- 217 (476)
T ss_pred HhcCCcchhhhHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 11 24555554433322221111000
Q ss_pred HHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHH
Q 009130 257 FIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCI 336 (543)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l 336 (543)
..+++|++.. ++.+.+ .+.+ +.+....+++.++++++|.+.+
T Consensus 218 --------------~~~~~p~~~~--------------~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~ 259 (476)
T PLN00028 218 --------------LGQDLPDGNY--------------RELKKS---------GTMP-KDSFSKVLRYGVTNYRTWILAL 259 (476)
T ss_pred --------------HcCcCCCCch--------------hhHHhc---------Cccc-cccHHHHHHHHHcCchhHHHHH
Confidence 0011111000 000000 0000 0011123567788999998888
Q ss_pred HHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCC-CchHHHHHHHHHHHHHH
Q 009130 337 ATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW-ARPIFMVITLVAMSIGH 414 (543)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~-~r~~~~~~~~~~~~i~~ 414 (543)
.+++.....+.+..++|.++.+ .|+++.+++.+.++..+++.++++++|+++||+++|+.. .|+....+..++..+.+
T Consensus 260 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~ 339 (476)
T PLN00028 260 TYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFC 339 (476)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHH
Confidence 7776666666677788888755 599999999999999999999999999999999987432 24444444444444433
Q ss_pred HHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcc
Q 009130 415 IAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHT 493 (543)
Q Consensus 415 ~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~ 493 (543)
+++. ..+.....+..++.+++.+...+...+++++. +++++|+++|+.+..+.+|+. ++|.+ .+..+
T Consensus 340 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~-i~~~l----~~~~~------ 407 (476)
T PLN00028 340 IWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAV-LTQLL----FFTGS------ 407 (476)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHH-HHHHH----HHhcC------
Confidence 3333 22323334444555665554444455555665 457999999999887777774 45444 33221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 494 CYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 494 ~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
..+|+.+|++.+++.+++.++.++++
T Consensus 408 ---~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 ---SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred ---CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 12499999999988888877776654
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=1.5e-29 Score=269.87 Aligned_cols=441 Identities=11% Similarity=0.043 Sum_probs=286.8
Q ss_pred cchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
..++.|.+++++.+..+..+. ....+...|.+.++++++..+.+++.+...++.. ..+++|+++||+|
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~G---------- 230 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLG---------- 230 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 356677776666655554443 4456778899999999999999988777777776 6779999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
||++++++.++.+++.++ ++++++ ++.++++|+++|+|.|+..+....++++++| ++||+++++..
T Consensus 231 -----RR~~lii~lil~~i~~ll-----~afa~s---~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~ 297 (742)
T TIGR01299 231 -----RKQCLLICLSVNGFFAFF-----SSFVQG---YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLC 297 (742)
T ss_pred -----cHHHHHHHHHHHHHHHHH-----HHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 999999999999998888 666666 7899999999999999999999999999999 67999999999
Q ss_pred HhhhhhHHHHHHHHHHhcCC-------------CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHH
Q 009130 165 GFVGLSGAVLTQVYKTVCNG-------------NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMT 231 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (543)
++..+|.++++.++..+... ..|++.+++..+|.++.++...++++.|..-..+.+...+...+..
T Consensus 298 ~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~- 376 (742)
T TIGR01299 298 MFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKL- 376 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHH-
Confidence 99999999998877665421 3588988888888888877776766554311011111111100000
Q ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCC-CCCCCCccccCCCccchhcccc
Q 009130 232 LAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTP-QQDPLAYHELADDESKVTAAFD 310 (543)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 310 (543)
+...+... +..+++.....+.+.. ..++..+.+ .+......+...
T Consensus 377 ---------i~~~n~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 422 (742)
T TIGR01299 377 ---------IHDTNMRA------------------------KGHPEKVFSVNHIKTIHQEDELIEIE-SDTGTWYQRCFV 422 (742)
T ss_pred ---------HhcCCCCC------------------------cCchhHHHHHHHHHHhhhhhhhhccc-ccccchhhcchh
Confidence 00000000 0000000000000000 000000000 000000000000
Q ss_pred cc-cchhhcchhHHHhhcc---hhHHHHHHHHHhhhchhhhhhhchHHHHHhh---C-------------------CCc-
Q 009130 311 DK-ILKDEEDMNLLQAMCT---GNFWFLCIATLCGMGSGIATMNNIAQVGESL---H-------------------YST- 363 (543)
Q Consensus 311 ~~-~~~~~~~~~~~~~~~~---~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~---g-------------------~s~- 363 (543)
.. .........++++++. +..+.+++..|...+.++++..|+|.++++. + ++.
T Consensus 423 ~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (742)
T TIGR01299 423 RALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLE 502 (742)
T ss_pred hhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchh
Confidence 00 0000001123333332 2345566666777778888999999875431 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 009130 364 -------------------------------------------------------------------------------- 363 (543)
Q Consensus 364 -------------------------------------------------------------------------------- 363 (543)
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (742)
T TIGR01299 503 NQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEG 582 (742)
T ss_pred hhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCc
Confidence
Q ss_pred ------------hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHH
Q 009130 364 ------------TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFVGTM 430 (543)
Q Consensus 364 ------------~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 430 (543)
........+.+++.++|.++.|+++||+||| +++..+.++.+++++++.. .+...+++..+
T Consensus 583 c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr------~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~ 656 (742)
T TIGR01299 583 CPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL------RMLAGSMVLSCISCFFLSFGNSESAMIALLC 656 (742)
T ss_pred cCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 0112334566788899999999999999654 6777787777777766553 34444555566
Q ss_pred HHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 009130 431 IVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFV 510 (543)
Q Consensus 431 l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~ 510 (543)
+.+++.++.++...++++|.+|++.|++++|+.+....+|+ +++|++.+.+.+.. ...+|++.+++
T Consensus 657 l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGa-iigp~i~g~L~~~~-------------~~~pf~i~a~~ 722 (742)
T TIGR01299 657 LFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAA-VLGILIFGSFVGIT-------------KAAPILFASAA 722 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh-------------hHHHHHHHHHH
Confidence 77887777888888999999999999999999999999999 58999998887653 55678888777
Q ss_pred HHHHHHHHHHHhhcchh
Q 009130 511 AFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 511 ~~~~~i~~~~~~~~~~~ 527 (543)
.++++++.+++ +++++
T Consensus 723 lll~~ll~~~L-PET~~ 738 (742)
T TIGR01299 723 LACGGLLALKL-PDTRG 738 (742)
T ss_pred HHHHHHHHHhC-CCCcc
Confidence 77777666655 55544
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1e-28 Score=258.63 Aligned_cols=399 Identities=13% Similarity=0.049 Sum_probs=277.1
Q ss_pred hhHHHHHHHHHHHHH-cCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccccc
Q 009130 11 SKWIATVASIWIQCS-VGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFL 88 (543)
Q Consensus 11 ~~w~~~~~~~~~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~ 88 (543)
++|.+++...+..+. .-.....++..|.+.+|+|.+..+.+|+.+.+.++.. ..++.|+++||+|
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~G------------- 69 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIG------------- 69 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 355555444443333 2234567788899999999999999988888888875 6789999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhc-C-CCCcchhHHHHHh
Q 009130 89 RGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNF-G-HYSGTIVGILKGF 166 (543)
Q Consensus 89 ~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~f-p-~~rg~~~gi~~~~ 166 (543)
||+++.++.+++++++++ ++++++ ++.++++|+++|+|.+...+.....+.+++ | ++|++++|+....
T Consensus 70 --rk~~l~~~~~~~~~~~~~-----~~~a~~---~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~ 139 (495)
T PRK14995 70 --FKRLLMLGGTLFGLASLA-----AAFSPT---ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAV 139 (495)
T ss_pred --cHHHHHHHHHHHHHHHHH-----HHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999999999999 888877 899999999999999998888888888887 5 5799999999999
Q ss_pred hhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh-heeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhc
Q 009130 167 VGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMS-HVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENL 245 (543)
Q Consensus 167 ~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (543)
.++|..++|.+++.+.+..+|+|.++......++.++... ++++.+.++ ++..+....+....+.........+..
T Consensus 140 ~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~---~~~~d~~g~~~~~~~~~~l~~~~~~~~ 216 (495)
T PRK14995 140 GSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR---DQPLNLGHALMLIVAILLLVYSAKTAL 216 (495)
T ss_pred HHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC---CCCCChHhHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999888999999887655555444333 333322211 111121111111111112222222221
Q ss_pred ccc-hhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 246 LTF-SLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 246 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
.++ +.|..........+.+..+.. ++. +. + +..-..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~l~~f~~---~e~---~~-------------------------------~-----~p~~~~~ 254 (495)
T PRK14995 217 KGFLSLWVTSLTLLTGALLLGLFIR---TQL---AA-------------------------------S-----RPMIDMR 254 (495)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHH---HHh---cC-------------------------------C-----CCCcCHH
Confidence 222 222212111111111111110 000 00 0 0011256
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 325 AMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 325 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
.+|++.++...+..++.....+....+.|.+++. .|+|+.+++....+..++..++.++.|++.||+++| +.+
T Consensus 255 lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~ 328 (495)
T PRK14995 255 LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR------LVA 328 (495)
T ss_pred HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHH
Confidence 7888988887777776666666667778888876 699999999999999999999999999999999653 566
Q ss_pred HHHHHHHHHHHHHHh-h---cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIA-S---GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII 479 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~-~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~ 479 (543)
..+.++.+++..++. . .+....+...++.|++.|...+.....+.+..|+++++.+.++.++...+|+. +|+.+.
T Consensus 329 ~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~-~G~ai~ 407 (495)
T PRK14995 329 TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAG-LGIAIF 407 (495)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHH-HHHHHH
Confidence 666666666655443 1 22233455677889999988887888888899999999999999888888874 677777
Q ss_pred hhhhh
Q 009130 480 GRIYD 484 (543)
Q Consensus 480 g~l~~ 484 (543)
|.+.+
T Consensus 408 g~i~~ 412 (495)
T PRK14995 408 GLLLS 412 (495)
T ss_pred HHHHH
Confidence 77654
No 19
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=4.2e-29 Score=254.40 Aligned_cols=355 Identities=10% Similarity=0.077 Sum_probs=260.8
Q ss_pred CCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHH
Q 009130 27 GTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTG 105 (543)
Q Consensus 27 g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g 105 (543)
+..+.++...|.+.+++|+|.++.+++.+...++.. .+++.|++.||+| ||+++..+.++.+++
T Consensus 21 ~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g---------------~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 21 ALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIP---------------LKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------HHHHHHHHHHHHHHH
Confidence 345678889999999999999999977777777765 6779999999999 999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC-
Q 009130 106 YFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN- 183 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~- 183 (543)
.++ ++++++ ++.+++.|+++|++.+...+.....+.+++| ++|+++++......++|+.++|.+.+.+..
T Consensus 86 ~~l-----~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 86 VAG-----LMFSHS---LALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHH-----HHHcch---HHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988 666665 7889999999999999888888889999998 579999999999999999999988887764
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 009130 184 GNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLL 263 (543)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (543)
..+|++.+....++.++..+...+
T Consensus 158 ~~gw~~~f~~~~~~~~~~~~~~~~-------------------------------------------------------- 181 (394)
T PRK03699 158 SIEWYWVYACIGLVYVAIFILTLF-------------------------------------------------------- 181 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHh--------------------------------------------------------
Confidence 357877776544433221111100
Q ss_pred hhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhc
Q 009130 264 LASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMG 343 (543)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~ 343 (543)
++.|+.++ + + + ++ +++. . ++ ..++.+|...+..++...
T Consensus 182 ---------~~~p~~~~---~------~-------~-~~-------~~~~-~-------~~-~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK03699 182 ---------SEFPALGK---H------A-------P-KA-------DKPV-A-------KE-KWGIGVLFLAIAALLYIL 219 (394)
T ss_pred ---------cCCccccc---c------C-------c-cc-------cCcc-c-------cc-cCChHHHHHHHHHHHHHH
Confidence 01111000 0 0 0 00 0000 0 00 113566766666666656
Q ss_pred hhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC
Q 009130 344 SGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGF 421 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~ 421 (543)
..+.+..+.|.++++ .|+|+.+++...+.+.++..+|+++.|+++||+++| +.+.....+..+.+.++. .++
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~------~~l~~~~~~~~~~~~~~~~~~~ 293 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ------RILTVLAGLALVLMYLFVNTDD 293 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh------hHHHHHHHHHHHHHHHHHHcCC
Confidence 666778899999965 699999999999999999999999999999999654 344444444444444443 344
Q ss_pred cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhH
Q 009130 422 PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFM 501 (543)
Q Consensus 422 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~ 501 (543)
.....+..++.|++.+..++...+...+..+ +++++..|.......+|. .++|.+.|++.|..| ++
T Consensus 294 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~-~i~p~~~G~l~~~~g------------~~ 359 (394)
T PRK03699 294 PSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGT-MLTFVVTSPIVAHFG------------LQ 359 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHH-HHHHHHHHHHHHHhC------------ch
Confidence 4455556777888888777777777777665 556788888888888888 589999999999887 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 009130 502 LSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~~ 522 (543)
..+++.+++++++.++.+.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 360 AALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred hhhhhhHHHHHHHHHHHHHHH
Confidence 899888888887776655554
No 20
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=1.8e-29 Score=257.00 Aligned_cols=377 Identities=14% Similarity=0.036 Sum_probs=266.3
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
+.++...|.+.+++|.++.+.+++.+...++.. ..++.|.+.||+| ||+++..+.++.+++..+
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g---------------~r~~~~~~~~~~~~~~~~ 75 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFG---------------ARKTLAVFIVIWGVFTGL 75 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcC---------------cceeeHHHHHHHHHHHHH
Confidence 456777799999999999999988777777775 6889999999999 999999999999999888
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
.+++++ ++.+++.|+++|++.+...+....++.|++| ++|++++++.....++|..+++++.+.+.+...|
T Consensus 76 -----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 147 (399)
T TIGR00893 76 -----QAFAGA---YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW 147 (399)
T ss_pred -----HHHHcC---HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc
Confidence 556666 7999999999999999999999999999998 6899999999999999999999999988877778
Q ss_pred hHHHHHHHHHHHHHHHHHh-heeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 188 TYILVLALLPTLVSLLFMS-HVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
++.+....+..++..+... ..++.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 174 (399)
T TIGR00893 148 QWAFIIEGVLGIIWGVLWLKFIPDPPQ----------------------------------------------------- 174 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhheecCCCC-----------------------------------------------------
Confidence 8777665544333222211 1111111
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
+.+..++++ ++...++. ..+. +++++++......++.++++.++...+..++......
T Consensus 175 -----------~~~~~~~~~---~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (399)
T TIGR00893 175 -----------KAKWLTEEE---KYIVVGGL-LAEQ-------QGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLG 232 (399)
T ss_pred -----------ccccCCHHH---Hhhcchhh-cccc-------ccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHH
Confidence 000000000 00000000 0000 0001111122345778899999998888888777777
Q ss_pred hhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHH-HHHHHH-H-HHHHHHhh--c
Q 009130 347 ATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMV-ITLVAM-S-IGHIAIAS--G 420 (543)
Q Consensus 347 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~-~~~~~~-~-i~~~~~~~--~ 420 (543)
.+..+.|.+.++ .|.++.+.+...+...+++.+++++.|+++||+++|+. ..... ...... . .+...... .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGK---SLVFARKTAIIAGLVLSLLMFATNYV 309 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc---chhHHHHHHHHHHHHHHHHHHHhccc
Confidence 788888888865 69999999999999999999999999999999987631 11111 111111 1 11111111 1
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
+.....+...+.+.+..+..+....++.|.+|+++++++.|+.+....+|. .++|.+.|.+.|..|+ |
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~~~~~i~g~l~~~~g~-----------~ 377 (399)
T TIGR00893 310 NIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGG-IVGPIVIGAIAATTGS-----------F 377 (399)
T ss_pred hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhh-hhhhHHhhhhccCCCc-----------h
Confidence 122223333333333333677788899999999999999999999999998 4889999999998763 8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009130 501 MLSFMIMAFVAFFGSLVAF 519 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~~ 519 (543)
+..|++.+++.+++.+..+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 378 AGALMVVAALALIGALSYL 396 (399)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 8888888887777766544
No 21
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=241.25 Aligned_cols=385 Identities=12% Similarity=0.051 Sum_probs=266.2
Q ss_pred ccccchhhHHHHHHHHHHH-HHcCCccccccccHHHHhhcCCChhhHHHHHHHh-hhcccccchhhHhhhhccccccccc
Q 009130 5 ERLSTNSKWIATVASIWIQ-CSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFK-DMGGSAGILSGLLFSYVTLNHHHHQ 82 (543)
Q Consensus 5 ~~~~~~~~w~~~~~~~~~~-~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~d~~g~~~~~~~ 82 (543)
+...|+.++..+....+.. ++...-+.++++.+.+.+|+|+|+.|.+++...- ..+....++.|.+.||||
T Consensus 5 ~~~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfG------- 77 (417)
T COG2223 5 EARGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG------- 77 (417)
T ss_pred HhccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC-------
Confidence 3344444444444443322 2223346688888999999999999999655554 455568999999999999
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhH
Q 009130 83 TRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVG 161 (543)
Q Consensus 83 ~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~g 161 (543)
.|++..++.++..+-.+.++ ++.+..+++++++.+++.|++.+ .+.+....+++||| +++|.++|
T Consensus 78 --------gR~~~~~s~~l~~IP~~~~~-----~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlG 143 (417)
T COG2223 78 --------GRKWTILSMLLLLIPCLGLA-----FAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALG 143 (417)
T ss_pred --------chHHHHHHHHHHHHHHHHHH-----HHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHH
Confidence 99999999999999988844 33332247899999999999865 56778889999999 57999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhcCCCc---hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHH
Q 009130 162 ILKGFVGLSGAVLTQVYKTVCNGNP---STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMV 238 (543)
Q Consensus 162 i~~~~~~lg~~i~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (543)
+.. ..++|..+...++..+...-. |+....+.+++.++..
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~------------------------------------ 186 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAA------------------------------------ 186 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH------------------------------------
Confidence 999 666888777666555432211 2211111111111111
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhc
Q 009130 239 ITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEE 318 (543)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (543)
+..+...++.|+.++ ..++ ..
T Consensus 187 ---------------------------v~~~~~~~d~p~~r~----------------------------~~~~----~~ 207 (417)
T COG2223 187 ---------------------------VLAWLGMNDVPEHRA----------------------------SVKP----QL 207 (417)
T ss_pred ---------------------------HHHHHHhCCChhhhc----------------------------cccc----cc
Confidence 111111112111111 0000 00
Q ss_pred chhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCC
Q 009130 319 DMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW 397 (543)
Q Consensus 319 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~ 397 (543)
+...+.+.++++.|.+.+.++...+.+.++..++|.++++ +|.++.+++.+...+.+.+.+.|+++|+++||+|.+
T Consensus 208 ~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~--- 284 (417)
T COG2223 208 PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR--- 284 (417)
T ss_pred hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch---
Confidence 0345677889999999999999999999999999999976 699999999999999999999999999999999743
Q ss_pred CchHHHHHHHHHHHHHHHHHh-hc-------CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhh
Q 009130 398 ARPIFMVITLVAMSIGHIAIA-SG-------FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPV 469 (543)
Q Consensus 398 ~r~~~~~~~~~~~~i~~~~~~-~~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~i 469 (543)
++..+....++++..... .. +....+...+..+++.|.......-+++.+++ ++.|.+.|++...+++
T Consensus 285 ---rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~l 360 (417)
T COG2223 285 ---RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGL 360 (417)
T ss_pred ---hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccc
Confidence 344555555555555444 21 12223333333344444444445556667776 4899999999999999
Q ss_pred hhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 470 GSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 470 g~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
|++ +-|...|...|.+|+ |...|++...+.+++.+.....+.|.
T Consensus 361 GGf-~lp~~~g~~~~~tg~-----------~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 361 GGF-FLPLAFGVSLDLTGS-----------YTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ccc-chhHHHHHHHHhccc-----------HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 995 678899999999884 99999999999999888776665443
No 22
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=1.6e-28 Score=253.48 Aligned_cols=405 Identities=15% Similarity=0.168 Sum_probs=263.9
Q ss_pred hhHHHHHHHHHHHHHc-CCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccccc
Q 009130 11 SKWIATVASIWIQCSV-GTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFL 88 (543)
Q Consensus 11 ~~w~~~~~~~~~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~ 88 (543)
.+|.++....+..... ...+.+....|.+++ +|.++++.+++.+...++.. .+++.|++.||+|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g------------- 89 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSN------------- 89 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccC-------------
Confidence 3565554444433322 233445666788876 59999999977777777765 6889999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhccCCCC-ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHh
Q 009130 89 RGPWVVHFTGAILCFTGYFLVWASVVGLLPRP-VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGF 166 (543)
Q Consensus 89 ~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~ 166 (543)
||+++..+.++.+++.++ .+..++. ++++.+++.|++.|++.+..++.....+.+++| ++||+++|+...+
T Consensus 90 --~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 90 --PRVFLPAGLILSAAVMLL-----MGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred --CceehHHHHHHHHHHHHH-----HhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHH
Confidence 999999999999998887 3332210 026777889999999999988888889999997 6899999999999
Q ss_pred hhhhHHHHHHHHHHhcC-CCchhHHHHHHHHHHHHH-HHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 167 VGLSGAVLTQVYKTVCN-GNPSTYILVLALLPTLVS-LLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 167 ~~lg~~i~~~l~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
.++|+.+++++...... ...|++.+....+..++. ++...++++
T Consensus 163 ~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~---------------------------------- 208 (438)
T TIGR00712 163 HNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD---------------------------------- 208 (438)
T ss_pred HHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC----------------------------------
Confidence 99999999988776543 346777666554443332 222222221
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
++++.+ .++.++.+.+ . .++..+ + .+.+ .+.++.-.+.
T Consensus 209 ------------------------------~~~~~~-~~~~~~~~~~----~--~~~~~~---~-~~~~-~~~~~~~~~~ 246 (438)
T TIGR00712 209 ------------------------------TPQSCG-LPPIEEYRND----Y--PDDYNE---K-AEQE-LTAKEIFMQY 246 (438)
T ss_pred ------------------------------CHHhcC-CCCchhcccc----c--cccccc---c-cccc-cchHHHHHHH
Confidence 111100 0000000000 0 000000 0 0000 0001111234
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 325 AMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 325 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
.++++.+|...+..++.....+....+.|.++++ .|+++.++++...++.+.++++++++|+++||+++++ |....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~---~~~~~ 323 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN---RGATG 323 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---ccHHH
Confidence 6789999998887777666666777889999986 5999999999999999999999999999999996542 11211
Q ss_pred HHHHHHHHHHHHHHh-h--cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIA-S--GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIG 480 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~-~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g 480 (543)
........++...+. . .+........++.|++..+........+.|.+|+++++++.|+.+....+++..++|.+.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G 403 (438)
T TIGR00712 324 VFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 403 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence 111111222222222 1 1222222333344443322222223457799999999999999988777775457899999
Q ss_pred hhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 009130 481 RIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 481 ~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
.+.|..| |+..|++..+..+++.+..+++.+++||
T Consensus 404 ~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 404 YTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHhcc------------chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999887 9999999988888888888887776653
No 23
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=2.1e-28 Score=255.99 Aligned_cols=371 Identities=13% Similarity=0.069 Sum_probs=237.7
Q ss_pred ccccccccHHHHhhcCCChhhH-HHH-----HHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTL-ERV-----AVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAIL 101 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~-~~~-----~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~ 101 (543)
.+.++...|.+.++|+.+.++. +++ .+...++.. .+++.|++.||+| ||+++.++.++
T Consensus 32 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G---------------rr~~l~~~~~l 96 (490)
T PRK10642 32 FGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYG---------------RQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------cHHHHHHHHHH
Confidence 4557778899999997544332 222 233334443 6889999999999 99999999999
Q ss_pred HHHHHHHHHHHHhccCCCCChHH--------HHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHH
Q 009130 102 CFTGYFLVWASVVGLLPRPVPVP--------LMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGA 172 (543)
Q Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~ 172 (543)
+++++++ ++++++ +. .++++|+++|+|.|..++....+++||+| ++||++.++...+..+|..
T Consensus 97 ~~i~~~~-----~a~~~~---~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~ 168 (490)
T PRK10642 97 MSISTFC-----IGLIPS---YATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFV 168 (490)
T ss_pred HHHHHHH-----HHhccc---HHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999 888887 44 37889999999999999999999999998 7899999999988888888
Q ss_pred HHHHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 173 VLTQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 173 i~~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
+++.+...+. ...+||+.++++.++.++++.....+ |++
T Consensus 169 lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~---~es------------------------------ 215 (490)
T PRK10642 169 LGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHAL---EET------------------------------ 215 (490)
T ss_pred HHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcC---CCC------------------------------
Confidence 8776554332 24578888877665444322211111 111
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
|+..+..++.+ +++++. .++ ..+.++++
T Consensus 216 -------------------------------p~~~~~~~~~~------------~~~~~~-----~~~----~~~~~~~~ 243 (490)
T PRK10642 216 -------------------------------PAFQQHVDKLE------------QGDREG-----LQD----GPKVSFKE 243 (490)
T ss_pred -------------------------------hhHHHHHHhhh------------hhcccc-----ccc----cccCCHHH
Confidence 00000000000 000000 000 00112233
Q ss_pred hhc-chhHHHHH-HHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH
Q 009130 325 AMC-TGNFWFLC-IATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI 401 (543)
Q Consensus 325 ~~~-~~~f~~~~-l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~ 401 (543)
.++ ++..+... ...++.....+.+..++|.++++ .|++..+.........++..++.++.|+++||+||| +
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr------~ 317 (490)
T PRK10642 244 IATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR------P 317 (490)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------H
Confidence 333 22222222 22233344556677788998854 699988888888888899999999999999999654 4
Q ss_pred HHHHHHHHHHH-HHHHH--hh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 402 FMVITLVAMSI-GHIAI--AS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 402 ~~~~~~~~~~i-~~~~~--~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
.+..+.++..+ +..++ .. .+...+++..++.|++.+...+..+.+++|.+|++.|+++.|+.+....+++ .++|.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~~~p~ 396 (490)
T PRK10642 318 FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-GLTPT 396 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-HHHHH
Confidence 55555443222 22212 12 2233445556667777776667777888999999999999998544444555 36788
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
+.+++.+..+. +...+++..+..+++++..+++ +|++
T Consensus 397 i~g~l~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~-pes~ 433 (490)
T PRK10642 397 LAAWLVESTQN-----------LMMPAYYLMVVAVIGLITGVTM-KETA 433 (490)
T ss_pred HHHHHHHHhCC-----------chHHHHHHHHHHHHHHHHHHHh-cccc
Confidence 89998886552 5556555555566665554444 4443
No 24
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=2.4e-29 Score=262.04 Aligned_cols=406 Identities=11% Similarity=0.023 Sum_probs=269.1
Q ss_pred ccchhhHHHHHHHHHHHHH-cCCccccccccHHHHh----------------------hcCCChhhHHHHHHHhhhccc-
Q 009130 7 LSTNSKWIATVASIWIQCS-VGTTYTFSIYSSTLKS----------------------TQNYDQSTLERVAVFKDMGGS- 62 (543)
Q Consensus 7 ~~~~~~w~~~~~~~~~~~~-~g~~~~~~~~~~~l~~----------------------~~~~s~~~~~~~~~~~~~~~~- 62 (543)
...+.||.+.......... .......++..+.+.+ |++++..+.+.+.+.+.+++.
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 3566778766655443332 2223344555555554 899999999988777787776
Q ss_pred ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhh
Q 009130 63 AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNT 142 (543)
Q Consensus 63 ~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~ 142 (543)
.+++.|++.||+| +|+++..+.++++++.++... +...+ ++.+++.|+++|++.+...+
T Consensus 92 ~~~~~g~l~dr~g---------------~r~~l~~~~~~~~~~~~~~~~---~~~~~---~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 92 IQIPVGYLAGKYV---------------FKWSIGIGMFLSSVISIVIPW---AAGGG---IALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred HHcchHHHHHHhC---------------cchhhHHHHHHHHHHHHHHHH---HHHcC---chHHHHHHHHHHHhcccchh
Confidence 7889999999999 999999999998888877321 11233 67789999999999999999
Q ss_pred hHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccch
Q 009130 143 GNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG-NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKK 220 (543)
Q Consensus 143 ~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (543)
....++++|+| ++|++++|+...+..+|.++++++.+.+.+. .+|++.+.+..+..++..+......
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~----------- 219 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP----------- 219 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh-----------
Confidence 99999999998 6899999999999999999999999988776 3787776665544333221111110
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCC
Q 009130 221 HLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELAD 300 (543)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (543)
+++|++++ +.+++| .+
T Consensus 220 ----------------------------------------------------~~~p~~~~---~~~~~~---------~~ 235 (465)
T TIGR00894 220 ----------------------------------------------------ADDPSIHP---CISKFE---------KK 235 (465)
T ss_pred ----------------------------------------------------cCCcccCC---CCCHHH---------HH
Confidence 11111100 000000 00
Q ss_pred CccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhh
Q 009130 301 DESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFF 379 (543)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~i 379 (543)
..++ ..+++.+ +.+....+++.++++.+|...+..++.....+.+..++|.++++ +|++..+.+...++..++..+
T Consensus 236 ~i~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i 312 (465)
T TIGR00894 236 YINS--SLQGQKG-STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWL 312 (465)
T ss_pred HHHh--hcccccC-CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHH
Confidence 0000 0000000 00112346788999999999998888877777888899999865 699999999999999999999
Q ss_pred hccccccchhhhhhhcCCCchHH--HHHHHHH--HHHHHHHHhh-c-CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCC
Q 009130 380 GRFGAGYGSDVFLHKLGWARPIF--MVITLVA--MSIGHIAIAS-G-FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGV 453 (543)
Q Consensus 380 g~~~~G~lsD~~~~~~~~~r~~~--~~~~~~~--~~i~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 453 (543)
+.++.|+++||+++|+...|+.. +..+... ..+..+.... . +.....+...+.+.+.+...+.......|..|
T Consensus 313 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 391 (465)
T TIGR00894 313 CSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP- 391 (465)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-
Confidence 99999999999876643222211 1111111 1111111221 1 22222333334344444444444444556655
Q ss_pred cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 454 RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 454 ~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
+..|.+.|+.+..+.+++. ++|.+.|.+.|..+ ..+|...|++.++..+++.++...+.
T Consensus 392 ~~~g~~~g~~~~~~~l~~~-i~p~l~g~~~~~~~---------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 392 RFLGFIKGITGLPGFIGGL-IASTLAGNILSQDS---------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHhhheeeCCCC---------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 5899999999999999995 78888998877542 12488999999888888877655443
No 25
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=4.2e-28 Score=253.98 Aligned_cols=426 Identities=13% Similarity=0.029 Sum_probs=258.3
Q ss_pred hhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhc--------CCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccc
Q 009130 10 NSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQ--------NYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHH 79 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~--------~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~ 79 (543)
++.+.+++.+.+..+..+. ...++...|.++++| ++++.+.+++.+.+.++.. .+++.|+++||+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~G---- 83 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG---- 83 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 3344444444444444553 344566667788877 8889999988787787776 7889999999999
Q ss_pred cccccccccCCchHHHHHHHHHHHHHHHHHHHHHh----ccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-C
Q 009130 80 HHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVV----GLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-H 154 (543)
Q Consensus 80 ~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~ 154 (543)
||+++.++.+++.++.++.++... ...++...++.++++|+++|++.|..++....+++|++| +
T Consensus 84 -----------rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~ 152 (479)
T PRK10077 84 -----------RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH 152 (479)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh
Confidence 999999999999988887322100 001111124667889999999999999999999999998 6
Q ss_pred CCcchhHHHHHhhhhhHHHHHHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHH
Q 009130 155 YSGTIVGILKGFVGLSGAVLTQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFS 226 (543)
Q Consensus 155 ~rg~~~gi~~~~~~lg~~i~~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (543)
+||+++++...+..+|.++++.+...+. +..+||+.+....++.++..+...++++.|+...++++......
T Consensus 153 ~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 232 (479)
T PRK10077 153 IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEG 232 (479)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHH
Confidence 7999999999999999998876655443 23478888877766666554444444332210000000000000
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchh
Q 009130 227 AVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVT 306 (543)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (543)
.. ++.. + . .+.++..+
T Consensus 233 ~~---------------------------------------------~~~~--~----------------~-~~~~~~~~ 248 (479)
T PRK10077 233 IL---------------------------------------------RKIM--G----------------N-TLATQALQ 248 (479)
T ss_pred HH---------------------------------------------HHHc--C----------------C-hhHHHHHH
Confidence 00 0000 0 0 00000000
Q ss_pred cccccccchhhcchhHHHhhcchhHHH---HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccc
Q 009130 307 AAFDDKILKDEEDMNLLQAMCTGNFWF---LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFG 383 (543)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~f~~---~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~ 383 (543)
+..+. .+......+..+....... .....+...........+.|.+.++.|++...........++.+.++.++
T Consensus 249 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 325 (479)
T PRK10077 249 --EIKHS-LDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVL 325 (479)
T ss_pred --HHHHH-HHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000011111000000 01111111111223345567888888998877887778889999999999
Q ss_pred cccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h--cCcc--hHHHHHHHHHhhhhhhh-hhHHHHHHhhcCCcchh
Q 009130 384 AGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-S--GFPG--NLFVGTMIVGVCYGSQW-SLMPTITSEIFGVRHMG 457 (543)
Q Consensus 384 ~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~--~~~~--~~~~~~~l~G~~~g~~~-~~~~~~~~~~~~~~~~g 457 (543)
.|+++||++|| .++..+.++++++++++. . .+.. ......++.+.+.+..+ +..+.++.|.+|+++|+
T Consensus 326 ~g~l~dr~g~r------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 399 (479)
T PRK10077 326 AIMTVDKFGRK------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 399 (479)
T ss_pred HHHHHHHhcCh------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHH
Confidence 99999999644 677777777777666543 1 1221 22223344444444322 56678999999999999
Q ss_pred hHHHHHHhhhhhhhhhhhhhhhhhhh------hhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhHH
Q 009130 458 TIFNTISIACPVGSYICSVRIIGRIY------DRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRFYNQ 531 (543)
Q Consensus 458 ~~~g~~~~~~~ig~~i~~~~l~g~l~------~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 531 (543)
++.|+.+....++.. +++.+.+.+. |..+ +...|++.++.+++++++.+++.+|+|++..+
T Consensus 400 ~~~g~~~~~~~~g~~-~~~~~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 466 (479)
T PRK10077 400 KALAIAVAAQWIANY-FVSWTFPMMDKNSWLVAHFH------------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLE 466 (479)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhHHHHhccchhhhcc------------CccHHHHHHHHHHHHHHHHHhccccCCCCCHH
Confidence 999999888888874 5554554433 3443 66788888877777777776667777766555
Q ss_pred HHHHh
Q 009130 532 VVIRR 536 (543)
Q Consensus 532 ~~~~~ 536 (543)
+.++.
T Consensus 467 ~~~~~ 471 (479)
T PRK10077 467 EMEAL 471 (479)
T ss_pred HHHHH
Confidence 44443
No 26
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=6.9e-28 Score=251.64 Aligned_cols=385 Identities=9% Similarity=-0.011 Sum_probs=260.6
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.+.++...|.+.+|+|.++.+.+++.+.+.++.. ..++.|+++||+| ||+++..+.++++++.+
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g---------------~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVG---------------VRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------hHHHHHHHHHHHHHHHH
Confidence 3455667899999999999999977777777754 6788999999999 99999999999998888
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
+ ++++++ ++.+++.|+++|+|.+...+.....+.+++| ++|+++.|+.....++|..+++++++.+.+..+
T Consensus 91 ~-----~~~~~~---~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 91 F-----CALSGT---LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS 162 (471)
T ss_pred H-----HHHhCC---HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc
Confidence 7 566665 7889999999999999999998899999998 579999999999999999999999999988888
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|++.+....+...+..+...... ++.+.+.++ .+.........+.........++.. ..|...............
T Consensus 163 w~~~f~~~~~~~~l~~~~~~~~~--~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 237 (471)
T PRK10504 163 WHWIFLINIPVGIIGAIATLMLM--PNYTMQTRR-FDLSGFLLLAVGMATLTLALDGSKG--LGLSPLAIAGLVAVGVVA 237 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CCccccCCC-CChHHHHHHHHHHHHHHHHHhcCCc--CCcchHHHHHHHHHHHHH
Confidence 99888876655444443333222 111111111 1111111111111111111111111 111111111111111111
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
......+++ +. ++ .....+++||+.++...+..++......
T Consensus 238 ~~~~~~~~~---~~-------------------------------~~-----~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 278 (471)
T PRK10504 238 LLLYLLHAR---NN-------------------------------NR-----ALFSLKLFRTRTFSLGLAGSFAGRIGSG 278 (471)
T ss_pred HHHHHHHHh---cC-------------------------------CC-----CccCHHHhcccchHHHHHHHHHHHHHHH
Confidence 111111110 00 00 0111347889998887777766655544
Q ss_pred hhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-c-Ccc
Q 009130 347 ATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-G-FPG 423 (543)
Q Consensus 347 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~-~~~ 423 (543)
......|.+.+. .|.++.+.++......++..++.++.|++.||+++| +++..+.++..+...++.. . +..
T Consensus 279 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (471)
T PRK10504 279 MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR------RVLVATTLGLALVSLLFMLVALLGW 352 (471)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHHHHHHHHHHHHHHHHHhcccccc
Confidence 455667888775 799999999999999999999999999999999654 5666666655555444432 1 121
Q ss_pred --hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 424 --NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 424 --~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
...+..++.|++.+...+....++.+..|+++++.++|+.++...+|.. +++.+.|.+.+..+
T Consensus 353 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~i~g~ll~~~g 417 (471)
T PRK10504 353 YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS-IGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 2233455667888877888888899999999999999999999999884 88888898888765
No 27
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=7.9e-28 Score=247.95 Aligned_cols=379 Identities=11% Similarity=-0.046 Sum_probs=241.0
Q ss_pred cchhhHHHHHHHHHHHHHcC-CccccccccHHHHhhcC---CChhhHHHHHHHhhhcc----cccchhhHhhhhcccccc
Q 009130 8 STNSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQN---YDQSTLERVAVFKDMGG----SAGILSGLLFSYVTLNHH 79 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~---~s~~~~~~~~~~~~~~~----~~~~~~G~l~d~~g~~~~ 79 (543)
.++++|+.++.+.+...... ..+.++...|.+.+|++ .+..+.+.....+..++ ..+++.|++.||+|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~G---- 91 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHG---- 91 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 44566665555544333322 35568888899999985 55555443333222222 35778999999999
Q ss_pred cccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCC-----hHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-
Q 009130 80 HHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPV-----PVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG- 153 (543)
Q Consensus 80 ~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp- 153 (543)
||+++..+.+++++++++ ++++++.. +...+++.|+++|+|.|..++...++++||+|
T Consensus 92 -----------rr~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~ 155 (432)
T PRK10406 92 -----------RKKSMLISVCMMCFGSLV-----IACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVE 155 (432)
T ss_pred -----------cHHHHHHHHHHHHHHHHH-----HhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC
Confidence 999999999999999999 77777620 02357889999999999999999999999998
Q ss_pred CCCcchhHHHHHhhhhhHHHHHHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhH
Q 009130 154 HYSGTIVGILKGFVGLSGAVLTQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAF 225 (543)
Q Consensus 154 ~~rg~~~gi~~~~~~lg~~i~~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (543)
++||++.++...+...|.++++.+...+. ...+||+.+.+..++.++.+. + +.
T Consensus 156 ~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~---~-~~--------------- 216 (432)
T PRK10406 156 GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW---L-RR--------------- 216 (432)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH---H-Hh---------------
Confidence 78999999988888777777765543321 135677777665554433210 0 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccch
Q 009130 226 SAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKV 305 (543)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (543)
..+|.++ .+++
T Consensus 217 ------------------------------------------------~~~e~~~--------------------~~~~- 227 (432)
T PRK10406 217 ------------------------------------------------QLDETSQ--------------------QETR- 227 (432)
T ss_pred ------------------------------------------------cCCCCch--------------------HHHh-
Confidence 0000000 0000
Q ss_pred hcccccccchhhcchhHHHhhcchhHHHHHHHHHhh-hchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccc
Q 009130 306 TAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCG-MGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFG 383 (543)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~ 383 (543)
+.+ +..+.++.++++++|...+..++. ....+.+..++|.++++ .|++..+.+...++..+...++.++
T Consensus 228 ----~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~ 298 (432)
T PRK10406 228 ----ALK-----EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPL 298 (432)
T ss_pred ----hhc-----ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 012346677888888776655443 45566677888998865 6999888888888888888899999
Q ss_pred cccchhhhhhhcCCCchHHHHHHHHHHHHHHH-HH--hh-c-CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhh
Q 009130 384 AGYGSDVFLHKLGWARPIFMVITLVAMSIGHI-AI--AS-G-FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGT 458 (543)
Q Consensus 384 ~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~-~~--~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~ 458 (543)
.|+++||++|| +.+.+..++..+... .+ .. . ++........+..++.+...+..+.+.+|.+|+|+|++
T Consensus 299 ~G~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t 372 (432)
T PRK10406 299 IGALSDKIGRR------TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRAL 372 (432)
T ss_pred HHHHHHHcCch------HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccch
Confidence 99999999754 333333332222211 11 11 1 22211112222223334444556678899999999999
Q ss_pred HHHHHHhhhhh-hhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 459 IFNTISIACPV-GSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 459 ~~g~~~~~~~i-g~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
+.|+.+..+.+ .+ ...|.+.+.+ +..|. |...+++.++..+++.+..+++.
T Consensus 373 ~~g~~~~~g~~~~g-~~~p~~~~~l-~~~g~-----------~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 373 GVGLSYAVANALFG-GSAEYVALSL-KSIGM-----------ETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred hhhHHHHHHHHHHH-hHHHHHHHHH-HHhCC-----------CcHHHHHHHHHHHHHHHHHHHhh
Confidence 99998765544 33 2467667744 55552 66667766666666666655543
No 28
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=4.3e-28 Score=244.72 Aligned_cols=373 Identities=15% Similarity=0.103 Sum_probs=240.9
Q ss_pred CccccccccHHHHh-hcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHH
Q 009130 28 TTYTFSIYSSTLKS-TQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTG 105 (543)
Q Consensus 28 ~~~~~~~~~~~l~~-~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g 105 (543)
.-+.++++.+.+.+ |+|+|++|.+++.+...+.+. ..++.|++.||+| +|+++.++.++..+.
T Consensus 49 ~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G---------------~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 49 VWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFG---------------GRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------ChHHHHHHHHHHHHH
Confidence 45678888888866 899999999977666666654 6799999999999 999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC
Q 009130 106 YFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG 184 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 184 (543)
+++.++......++ ++.+++.|++.|++ +..+++....+++||| ++||+++|+.....++|..+.+.+...+.
T Consensus 114 ~~~~~~a~~~~~~s---~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i-- 187 (462)
T PRK15034 114 CVWLGIAVQNPNTP---FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI-- 187 (462)
T ss_pred HHHHHHHHcccCCC---HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH--
Confidence 98833211111244 89999999999998 7788999999999999 57999999997777777777665543321
Q ss_pred CchhHHHHHHHHHHHHHHHHHhheeccCCCC-----cccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHH
Q 009130 185 NPSTYILVLALLPTLVSLLFMSHVRIYGTNS-----VDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFII 259 (543)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (543)
.... ....+++. ++............ .
T Consensus 188 ----------------~~~l---~~~~G~~~~~~~~g~~~~~~~~~~~~~-----------------------------~ 219 (462)
T PRK15034 188 ----------------FVPV---FAFLGVNGVPQADGSVMSLANAAWIWV-----------------------------P 219 (462)
T ss_pred ----------------HHHH---HHHhccccccccccchHHHHHHHHHHH-----------------------------H
Confidence 1000 00011100 00000111111110 0
Q ss_pred HHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHH
Q 009130 260 LLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATL 339 (543)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~ 339 (543)
.+++..+..++. .+++++ .+......++.+|+|..|.+++.++
T Consensus 220 ~~iv~~i~~~~~-~~~~~~------------------------------------~~~~~~~~~~vlk~~~~Wllslly~ 262 (462)
T PRK15034 220 LLAIATIAAWSG-MNDIAS------------------------------------SRASIADQLPVLQRLHLWLLSLLYL 262 (462)
T ss_pred HHHHHHHHHHHh-CCCccc------------------------------------cccCHHHHHHHhCCCchhHHHHHHH
Confidence 001111111111 111000 0001133467899999999999999
Q ss_pred hhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH-H-
Q 009130 340 CGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA-I- 417 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~-~- 417 (543)
+..+.+.++..++|++.++ .++.........+..+...+.++++|+++||+|++ +++.++.+.+.++... +
T Consensus 263 ~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~------~vl~~~~i~~~i~~~~~~l 335 (462)
T PRK15034 263 ATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGV------RVTLINFIFMAIFSALLFL 335 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch------HHHHHHHHHHHHHHHHHHH
Confidence 9888888888899998866 44443333334456788889999999999999654 5555565554444322 1
Q ss_pred hhcC-----cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCC---------------------cchhhHHHHHHhhhhhhh
Q 009130 418 ASGF-----PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGV---------------------RHMGTIFNTISIACPVGS 471 (543)
Q Consensus 418 ~~~~-----~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~---------------------~~~g~~~g~~~~~~~ig~ 471 (543)
..+. .....+..+...++.|.......-+++++||+ ++.|.+.|+....+.+|+
T Consensus 336 ~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Gg 415 (462)
T PRK15034 336 TLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGG 415 (462)
T ss_pred HhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHccc
Confidence 1221 11122222222233333333344445555553 267889999999999999
Q ss_pred hhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 472 YICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 472 ~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
+ +-|.+.|...+.+|+ |...|+++.++.+++.++.+..+.|+
T Consensus 416 f-~~p~~~g~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 416 F-FIPQAFGMSLNMTGS-----------PVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred c-hhhHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 6 667789999998884 99999999999999999988776554
No 29
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.2e-28 Score=258.71 Aligned_cols=437 Identities=11% Similarity=0.007 Sum_probs=266.4
Q ss_pred cccccccchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhc-----CCChhhHHHHHHHhhhccc-ccchhhHhhhhc
Q 009130 2 RMEERLSTNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQ-----NYDQSTLERVAVFKDMGGS-AGILSGLLFSYV 74 (543)
Q Consensus 2 ~~~~~~~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~-----~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~ 74 (543)
++|+.+..+..++++..+.+..+..|. ....+...|.+.+++ +.++.+.+++.+...++.. ..++.|++.||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~ 83 (502)
T TIGR00887 4 EADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL 83 (502)
T ss_pred hhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 356666677777766666555555543 344566667776642 3455666777787788776 678999999999
Q ss_pred ccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCC---hHHHHHHHHHHHhcCcchhhhhHHHHHhhh
Q 009130 75 TLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPV---PVPLMCLFIFTAAHAQNFFNTGNIVTGVMN 151 (543)
Q Consensus 75 g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~ 151 (543)
| ||+++.++.+++.++.++ ++++.+.. +++.++++|+++|++.|..++....+++|+
T Consensus 84 G---------------rr~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 143 (502)
T TIGR00887 84 G---------------RKRVYGMELIIMIIATVA-----SGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEF 143 (502)
T ss_pred c---------------cHHHHHHHHHHHHHHHHH-----HHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHh
Confidence 9 999999999999999888 44443210 157789999999999999999999999999
Q ss_pred cC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC-----------------------CCchhHHHHHHHHHHHHHHHHHhh
Q 009130 152 FG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN-----------------------GNPSTYILVLALLPTLVSLLFMSH 207 (543)
Q Consensus 152 fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~ 207 (543)
+| ++||+++++......+|..+++.+...+.. +..||+.+.+..+|.++.++...+
T Consensus 144 ~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~ 223 (502)
T TIGR00887 144 ATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLT 223 (502)
T ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99 689999999999999999888887765421 236999998888888877766666
Q ss_pred eeccCCCCcccchh-hhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCC
Q 009130 208 VRIYGTNSVDDKKH-LNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLS 286 (543)
Q Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (543)
+++.|+.-..+++. ..+...+. +..++ +
T Consensus 224 lpESpr~l~~~~~~~~~a~~~~~--------------------------------------------~~~~~-----~-- 252 (502)
T TIGR00887 224 IPETPRYTADVAKDVEQAASDMS--------------------------------------------AVLQV-----K-- 252 (502)
T ss_pred CCCCHHHHHHhCcchHHHHHHHH--------------------------------------------HHhcc-----c--
Confidence 66554310000000 00000000 00000 0
Q ss_pred CCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcc---hh----HHHHHHHHHhhhchhhhhhhchHHHHHhh
Q 009130 287 TPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCT---GN----FWFLCIATLCGMGSGIATMNNIAQVGESL 359 (543)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----f~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 359 (543)
.+++ .++.++ .+ ++++ ..+.++++++++ ++ .+......+......++...+.|.++++.
T Consensus 253 --~~~~---~~~~~~---~~---~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~ 318 (502)
T TIGR00887 253 --IEAE---PDEVEK---AS---TAVE---VPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAI 318 (502)
T ss_pred --cccC---cccccc---hh---cccc---chhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHH
Confidence 0000 000000 00 0000 001123444432 11 12222223333344556667788988888
Q ss_pred CCCchhhHH------------HHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hc--Ccc
Q 009130 360 HYSTTEINS------------LISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA--SG--FPG 423 (543)
Q Consensus 360 g~s~~~a~~------------~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~~--~~~ 423 (543)
|+++.+++. ...+..++.+++.+++++++||+||| +++..+.+++.+++.++. .. +..
T Consensus 319 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR------~~l~~~~~~~~~~~~~l~~~~~~~~~~ 392 (502)
T TIGR00887 319 GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK------PIQLMGFFILTVLFFVLGFAYNHLSTH 392 (502)
T ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch------hHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 887553221 23344556667889999999999654 566666666555544333 11 111
Q ss_pred h-HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 424 N-LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 424 ~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
. +....+...++..+..+....+.+|.+|++.|+++.|+.+..+.++++ ++|.+.+.+.|..+...+. +...++..
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--~~~~~~~~ 469 (502)
T TIGR00887 393 GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI-IGQFGFLYLAQHGDPTKGY--PTGIWMGH 469 (502)
T ss_pred HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH-HHHHHhhhhhccccccccc--cccccchH
Confidence 1 111111111222223445667789999999999999999999999984 8888999998854210000 00012566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhHHHH
Q 009130 503 SFMIMAFVAFFGSLVAFLLFLRTRRFYNQVV 533 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 533 (543)
.|++.++.++++.+.. ++.+|+|++..++.
T Consensus 470 ~~~i~~~~~~~~~i~~-~~lpEt~~~~leei 499 (502)
T TIGR00887 470 VLEIFALFMFLGILFT-LLIPETKGKSLEEL 499 (502)
T ss_pred HHHHHHHHHHHHHHHh-eEeccCCCCCHHhh
Confidence 7888888777776654 44567777654443
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=4.8e-28 Score=247.67 Aligned_cols=378 Identities=13% Similarity=0.082 Sum_probs=251.6
Q ss_pred cchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
.++++|..+..+++.....+. .+..+...|.+++++|+++.+.+++.+...++.. .+++.|.+.||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g---------- 75 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYG---------- 75 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 456777776666665555443 4567888899999999999999977777676665 7889999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
||+++..+.++.+++.++ ++++++ ++.+++.|++.|++.+..++....++.|++| ++|++++++..
T Consensus 76 -----~r~~~~~~~~~~~~~~~~-----~~~~~~---~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 142 (405)
T TIGR00891 76 -----RRLPMVTSIVLFSAGTLA-----CGFAPG---YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLI 142 (405)
T ss_pred -----cHHHHHHHHHHHHHHHHH-----HHHhcc---HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHH
Confidence 999999999999999888 666666 8999999999999999999999999999998 68999999999
Q ss_pred HhhhhhHHHHHHHHHHhcCCC--chhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHH
Q 009130 165 GFVGLSGAVLTQVYKTVCNGN--PSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVM 242 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (543)
.+.++|.++++.+...+.+.. .|++.+.+..++.++.++.....++.++
T Consensus 143 ~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~----------------------------- 193 (405)
T TIGR00891 143 SGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAED----------------------------- 193 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChh-----------------------------
Confidence 999999999999988876543 4888777665554443322211111100
Q ss_pred hhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhH
Q 009130 243 ENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNL 322 (543)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (543)
.++.+ +.++...+. .+ +..++++. .+.. .++.....
T Consensus 194 ---------------------------------~~~~~---~~~~~~~~~-~~--~~~~~~~~----~~~~-~~~~~~~~ 229 (405)
T TIGR00891 194 ---------------------------------WKEKH---AGKALVRTM-VD--ILYGGEHR----IANI-VMTLAAAM 229 (405)
T ss_pred ---------------------------------HHHHh---hhhhhhhhH-HH--HHhccchh----hhhh-hhhhhHHh
Confidence 00000 000000000 00 00000000 0000 00000001
Q ss_pred HHhh-cc-hhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 323 LQAM-CT-GNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 323 ~~~~-~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
++.. ++ +.+........+..........+.|.+.+ +.|+++.+.+.+.+...++..+++++.|+++||+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~----- 304 (405)
T TIGR00891 230 VQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR----- 304 (405)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----
Confidence 1111 11 11222222222222233344556777775 5799999999999999999999999999999999654
Q ss_pred hHHHHHHHHHHHHH-HHHHhhc-CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 400 PIFMVITLVAMSIG-HIAIASG-FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 400 ~~~~~~~~~~~~i~-~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
+.+..+.+...+. ..++... +...+.+..++.+++.++..+..+.++.|.+|+++++++.|+.+....++. .++|+
T Consensus 305 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~g~~ 382 (405)
T TIGR00891 305 -KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGG-ALAPI 382 (405)
T ss_pred -hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHH-HHHHH
Confidence 3444444433222 2222222 222334444566666666677788899999999999999999998888988 48999
Q ss_pred hhhhhhhhccC
Q 009130 478 IIGRIYDRVAS 488 (543)
Q Consensus 478 l~g~l~~~~g~ 488 (543)
+.|.+.|..|+
T Consensus 383 ~~g~l~~~~g~ 393 (405)
T TIGR00891 383 IGALLAQRLDE 393 (405)
T ss_pred HHHHHHHhccc
Confidence 99999999874
No 31
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=2.6e-27 Score=240.81 Aligned_cols=365 Identities=10% Similarity=0.037 Sum_probs=255.8
Q ss_pred cchhhHHHHHHHHHHH-HHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQ-CSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~-~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
..|+-|..+....... +.....|....+.|.+.+|+|+++++.++..+...++.. .+++.|.+.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g---------- 83 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATD---------- 83 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC----------
Confidence 3445666544433332 222234444456789999999999999966555555554 7889999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
||+++..+.++++++.++ ++++++ ++.+++.|+++|++.+...+....++.|++| ++|++++++..
T Consensus 84 -----rr~~~~~~~~~~~~~~~~-----~~~~~~---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~ 150 (394)
T PRK10213 84 -----RRYVVILFAVLLTLSCLL-----VSFANS---FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIF 150 (394)
T ss_pred -----cHHHHHHHHHHHHHHHHH-----HHHHCh---HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHH
Confidence 999999999999998888 666665 8999999999999999999999999999998 68999999999
Q ss_pred HhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 165 GFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
.+.++|.++++++++.+.+..+|++.+....+..++..+. ..
T Consensus 151 ~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~--~~------------------------------------ 192 (394)
T PRK10213 151 GAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW--II------------------------------------ 192 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH--HH------------------------------------
Confidence 9999999999999999987778887776544322211100 00
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
+..|+.++ + +++ .....++
T Consensus 193 ----------------------------~~~p~~~~----------------~------------~~~-----~~~~~~~ 211 (394)
T PRK10213 193 ----------------------------KSLPSLPG----------------E------------PSH-----QKQNTFR 211 (394)
T ss_pred ----------------------------HHCCCCCc----------------c------------ccc-----chhHHHH
Confidence 00010000 0 000 0012356
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhch-HHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 325 AMCTGNFWFLCIATLCGMGSGIATMNNI-AQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 325 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
.+++|.+|...+..++.....+....+. |.+.++.|+++++.+......+++..+++++.+++.||.+ ++..+
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~------~~~l~ 285 (394)
T PRK10213 212 LLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV------KLALA 285 (394)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc------hhHHH
Confidence 7889998887666555444444545555 6666778999999999999999999999999999988852 22233
Q ss_pred HHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
....+.....+++.. ..+.....+..++.|++.+...+..+..+.+..| ++.+.+.+.......+|. .+||.+.|.+
T Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~-~~G~~l~G~l 363 (394)
T PRK10213 286 GAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLAN-TCGAAIGGYA 363 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 323332333333332 3344455667778898888888888877888776 566777777766677777 4889999999
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHH
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
.|..| ++..++..++..++.
T Consensus 364 ~~~~g------------~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 364 LDNIG------------LTSPLMLSGTLMLLT 383 (394)
T ss_pred HhccC------------hhhHHHHHHHHHHHH
Confidence 99876 777777665544443
No 32
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=9.3e-29 Score=258.48 Aligned_cols=403 Identities=13% Similarity=0.016 Sum_probs=258.3
Q ss_pred cccccccHHHHhhcCCC--------hhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYD--------QSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAI 100 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s--------~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~ 100 (543)
..++...|.+.++++.+ ..+.+++.+.+.++.. .+++.|++.||+| ||+++.++.+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g---------------rr~~~~~~~~ 109 (481)
T TIGR00879 45 GVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFG---------------RKKSLLIIAL 109 (481)
T ss_pred chhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhh---------------hHHHHHHHHH
Confidence 34555667777777766 8889977777777765 7889999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHH-
Q 009130 101 LCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVY- 178 (543)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~- 178 (543)
++.++.++ +....+..+++.+++.|+++|+|.+..++....+++|++| ++|++++++...+..+|.++++.+.
T Consensus 110 ~~~~~~~~-----~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 110 LFVIGAIL-----MGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHH-----HHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999888 4333221125688999999999999999999999999998 6899999999999999999999988
Q ss_pred --HHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHH
Q 009130 179 --KTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIIT 256 (543)
Q Consensus 179 --~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (543)
....+..+|++.+....++.++.++...++++.|.....+++........
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------------- 236 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSL---------------------------- 236 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHH----------------------------
Confidence 44445668998888876666665555445443321000000000000000
Q ss_pred HHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhc---chhHHH
Q 009130 257 FIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMC---TGNFWF 333 (543)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~f~~ 333 (543)
.+..+.. +.+....++ .+..+... +.+.+..+.......+..+ .+.++.
T Consensus 237 -----------------~~~~~~~--------~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (481)
T TIGR00879 237 -----------------ARLRGTS--------GEDKELLDE-LELIDIKR--SIEKRSVQPSWGSLFSSTRRIRRRLFLG 288 (481)
T ss_pred -----------------HHHhCCC--------CCcHHHHHH-HHHHHHHH--HHHHhhccccHHHHHhcCchhHHHHHHH
Confidence 0000000 000000000 00000000 0000000000111122222 233444
Q ss_pred HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 334 LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
..+..+...........+.|.+.++.|++..+++....+..++.++++++.|+++||+++| +.+..+.++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~------~~~~~~~~~~~~~ 362 (481)
T TIGR00879 289 VVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR------PLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------HHHHHHHHHHHHH
Confidence 4444443333333456667888888899998888899999999999999999999999654 4555566655555
Q ss_pred HHHHh---h--cC------cchHHHHHHHHHhhhhhh-hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhh
Q 009130 414 HIAIA---S--GF------PGNLFVGTMIVGVCYGSQ-WSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGR 481 (543)
Q Consensus 414 ~~~~~---~--~~------~~~~~~~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~ 481 (543)
++++. . .+ ........++.+.+.+.. .+....++.|.+|+++++++.|+.+....+++. ++|.+.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~-i~~~~~~~ 441 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANF-IVGFLFPT 441 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 54433 1 11 112222233333333322 345556779999999999999999999999985 78889999
Q ss_pred hhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 009130 482 IYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 482 l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
+.|..+ |+..|++.++++++++++.+++.+++|+
T Consensus 442 ~~~~~~------------~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 442 MLESIG------------VGGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred HHHhcC------------ccceehhHHHHHHHHHHHHheecccCCC
Confidence 988876 8888999988888888777666655544
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=7.2e-28 Score=243.85 Aligned_cols=356 Identities=14% Similarity=0.133 Sum_probs=246.8
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
...++...|.+.+++|++..+.+++.+...++.. ..++.|++.||+| ||+++..+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSN---------------PRVFLPIGLILCAIVNL 75 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhC---------------CeehhHHHHHHHHHHHH
Confidence 4567778899999999999999988777777765 6889999999999 99999999999999998
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHH-HHHHhcCCC
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQ-VYKTVCNGN 185 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~-l~~~l~~~~ 185 (543)
+ .+++++ ++.+++.|++.|++.+...+....++.+++| ++|++++++...+..+|..++++ +...+.+..
T Consensus 76 ~-----~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00881 76 F-----FGFSTS---LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY 147 (379)
T ss_pred H-----HHHhhh---HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC
Confidence 8 556665 7899999999999999999999999999998 57999999999999999999995 544554555
Q ss_pred chhHHHHHHHHHHHH-HHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHh
Q 009130 186 PSTYILVLALLPTLV-SLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLL 264 (543)
Q Consensus 186 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (543)
+|++.+....+..++ .++...+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------- 172 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICFLLLR------------------------------------------------------- 172 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHheeeC-------------------------------------------------------
Confidence 676665544332222 121111111
Q ss_pred hcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhch
Q 009130 265 ASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGS 344 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~ 344 (543)
+++++++..++++ +.+ ++++++++ ++++..+..+...++.++++.+|.+.+..++....
T Consensus 173 ---------~~~~~~~~~~~~~--~~~----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (379)
T TIGR00881 173 ---------DSPQSCGLPPAEE--MPN----EEPDGDAE------KKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV 231 (379)
T ss_pred ---------CCccccccCcccc--Ccc----cccccccc------cccccccchHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 1111110000000 000 00000000 00000111223346778899999888887777666
Q ss_pred hhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---c
Q 009130 345 GIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS---G 420 (543)
Q Consensus 345 ~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~---~ 420 (543)
...+..+.|.+.++ .|+++.+++...++..++..+++++.|++.||..++ .|............++...+.. .
T Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (379)
T TIGR00881 232 RTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG---RRGPLAVFFMALIIVSLLVYWLNPAA 308 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC---cchHHHHHHHHHHHHHHHHHhcCcch
Confidence 66777788888765 699999999999999999999999999999987543 1222222222222222222221 1
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+.....+..++.|+...+..+....++.|.+|+++++++.|+.+....++.. ++|.+.|.+.|..|
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~~~g~l~~~~g 374 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI-LAGLPLGYLADGFG 374 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh-hhhhhHHHHHHhhc
Confidence 2223344455566655555555667889999999999999999999999985 89999999999876
No 34
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=1.3e-26 Score=236.74 Aligned_cols=355 Identities=12% Similarity=0.055 Sum_probs=241.3
Q ss_pred HHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhc
Q 009130 37 STLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVG 115 (543)
Q Consensus 37 ~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~ 115 (543)
+.+.+|+|+++.|.+++.+.+.++.. .+++.|++.||+| ||+++..+.++++++.++... .+
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g---------------~k~~l~~~~~~~~~~~~~~~~--~~ 99 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIG---------------PLKTMMIGLLLWCVGHAAFIV--FG 99 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcC---------------cHHHHHHHHHHHHHHHHHHHH--Hh
Confidence 44557899999999977777777765 7889999999999 999999999999888765211 13
Q ss_pred cCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhH-HHHHHHHHHhcCCCchhHHHHH
Q 009130 116 LLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSG-AVLTQVYKTVCNGNPSTYILVL 193 (543)
Q Consensus 116 ~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~-~i~~~l~~~l~~~~~~~~~~~~ 193 (543)
...+ +++.+++.|+++|+|.+...+.....+.+++| +||++++|+..++.++|. .+++++++.+.+..+|+..+..
T Consensus 100 ~~~~--~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 100 LGHA--NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred ccCc--cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 3322 27788889999999998877777777888887 789999999999999996 5677776666543332211111
Q ss_pred HHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccc
Q 009130 194 ALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAIT 273 (543)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (543)
......+. .+... ...+
T Consensus 178 ~~~~~~~~------------------------------------------------------------~~~~~---~~~~ 194 (402)
T TIGR00897 178 ALAFVLTG------------------------------------------------------------GVIAL---FSNK 194 (402)
T ss_pred HHHHHHHH------------------------------------------------------------HHHHH---hccC
Confidence 10000000 00000 0011
Q ss_pred cccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchH
Q 009130 274 ADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIA 353 (543)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~ 353 (543)
+++++++ + +++ ++ .++.....++.+|+|.+|...+..++.....+.+..+.|
T Consensus 195 ~~~~~~~---~--------------~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 246 (402)
T TIGR00897 195 DIFTPQH---M--------------QTR--------EK---FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLP 246 (402)
T ss_pred CCCCccc---c--------------cCC--------cc---hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110000 0 000 00 001112345678999999888777776666677788899
Q ss_pred HHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH---Hhh---cCcchHHH
Q 009130 354 QVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA---IAS---GFPGNLFV 427 (543)
Q Consensus 354 ~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~---~~~---~~~~~~~~ 427 (543)
.+.++.|+++.+.+...+...+++.++++..|+++||+++|+ .....+.+...++.+. ... ++....++
T Consensus 247 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 247 MFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 999889999999999989999999999999999999997542 2222222222222111 111 12233455
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIM 507 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~ 507 (543)
..++.|++.+...+ ....+.|. ++++++++.|+.+....++.. ++|.+.|.+.|..| +...+++.
T Consensus 322 ~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~-~gp~i~g~l~~~~g------------~~~~~~~~ 386 (402)
T TIGR00897 322 IAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAF-LAPAIAVLFIGFFG------------AIGVVWIF 386 (402)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc------------hHHHHHHH
Confidence 66677877776543 34455665 457899999999999999984 89999999999887 88899999
Q ss_pred HHHHHHHHHHHHHH
Q 009130 508 AFVAFFGSLVAFLL 521 (543)
Q Consensus 508 ~~~~~~~~i~~~~~ 521 (543)
+++.+++.++..++
T Consensus 387 a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 387 AALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888887776665
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=4.3e-27 Score=240.33 Aligned_cols=350 Identities=12% Similarity=0.100 Sum_probs=241.0
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~ 110 (543)
.+.+...+++++|.|+.+.+++.+...++.. .+++.|.+.||+| ||+++..+.++++++.....
T Consensus 35 ~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g---------------~r~~l~~~~~~~~~~~~~~~ 99 (399)
T PRK05122 35 LAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLG---------------PKKAVVFGLCGCALSGLLYL 99 (399)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccC---------------CcchHHHHHHHHHHHHHHHH
Confidence 3444445789999999999988777777775 7899999999999 99999999998888766532
Q ss_pred HHHhccCCCC--ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 111 ASVVGLLPRP--VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 111 ~~~~~~~~~~--~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
+ ..+.++. .+++.+++.|+++|+|.+...+.....+.+++| ++|++++++...+..+|.++++++++.+.+..+|
T Consensus 100 ~--~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 177 (399)
T PRK05122 100 L--AGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 177 (399)
T ss_pred H--hhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence 2 2222210 025678889999999999999988888899997 7899999999999999999999998888766666
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.++...+..++.+ .+
T Consensus 178 ~~~~~~~~~~~~~~~---~~------------------------------------------------------------ 194 (399)
T PRK05122 178 AGLGLLIMLLALLGL---LL------------------------------------------------------------ 194 (399)
T ss_pred HHHHHHHHHHHHHHH---HH------------------------------------------------------------
Confidence 655433222111100 00
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
.++.+++++ + + +++ .+.++.++ .+|.......+.......
T Consensus 195 ----~~~~~~~~~------------------~-~--------~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (399)
T PRK05122 195 ----ARPRPAVPP------------------V-K--------GER-------LPFRRVLG--RVWPYGMGLALASIGFGT 234 (399)
T ss_pred ----HhcCCCCCC------------------C-C--------ccc-------hhHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 001110000 0 0 000 00111111 122222222222222333
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 426 (543)
...+.+.+.++.|.+ +.+...+.+.++..+++++.|++.||+++| +.+..+..+..++..++. .++....+
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGL------RVAIVSLLVEILGLLLLWLAPSPWMAL 306 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445667777777763 456677788889999999999999999643 456566666666655544 34445556
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
+..++.|++.+..++.....+.|.+|+++++++.|+.+....+|.. ++|.+.|.+.|..| |+..|++
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~~~g~l~~~~g------------~~~~~~~ 373 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLG-ITGPLAGLVASWFG------------YPSIFLA 373 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC------------HHHHHHH
Confidence 6677889988887777777788899999999999999998888874 67778999999876 9999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 009130 507 MAFVAFFGSLVAFLLF 522 (543)
Q Consensus 507 ~~~~~~~~~i~~~~~~ 522 (543)
.+++.+++.++.+.+.
T Consensus 374 ~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 374 AALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8888887776655443
No 36
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=6.9e-27 Score=241.10 Aligned_cols=353 Identities=12% Similarity=0.001 Sum_probs=227.3
Q ss_pred hhhHHHHHHHHHHHHHcC-CccccccccHHHHhhcCCChhhHH-HHHHHhhhc--c----cccchhhHhhhhcccccccc
Q 009130 10 NSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQNYDQSTLE-RVAVFKDMG--G----SAGILSGLLFSYVTLNHHHH 81 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~-~~~~~~~~~--~----~~~~~~G~l~d~~g~~~~~~ 81 (543)
..||.......+..+... ....++...|.+.+|++.++.+.+ +..+...++ . ..+++.|.+.||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G------ 84 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVG------ 84 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhc------
Confidence 344554443333333333 355688899999999999888876 333222221 1 24678999999999
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHH--------HHHHHHHHHhcCcchhhhhHHHHHhhhcC
Q 009130 82 QTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVP--------LMCLFIFTAAHAQNFFNTGNIVTGVMNFG 153 (543)
Q Consensus 82 ~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~g~g~~~~~~~~~~~~~fp 153 (543)
||+++..+.+++++++++ ++++++ ++ .+++.|+++|++.+...+....+++||+|
T Consensus 85 ---------rr~~l~~~~~~~~~~~~l-----~~~~~~---~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 147 (434)
T PRK15075 85 ---------RRKGLIVTLSIMASGTLL-----IAFVPG---YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT 147 (434)
T ss_pred ---------hHHHHHHHHHHHHHHHHH-----HHhCCc---HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC
Confidence 999999999999999999 777776 44 46889999999999999988899999998
Q ss_pred -CCCcchhHHHHHhhhhhHHHHHHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhh
Q 009130 154 -HYSGTIVGILKGFVGLSGAVLTQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNA 224 (543)
Q Consensus 154 -~~rg~~~gi~~~~~~lg~~i~~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (543)
++|++++++...+..+|..+++.++..+. +..+|++.+....+...+. .+.
T Consensus 148 ~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~---------------- 207 (434)
T PRK15075 148 PGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLI---------------- 207 (434)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHH----------------
Confidence 68999999999888888877776666542 2345666665433221100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccc
Q 009130 225 FSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESK 304 (543)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (543)
+..+++.+ + . +++
T Consensus 208 ------------------------------------------------~~~~~e~~-----------~------~--~~~ 220 (434)
T PRK15075 208 ------------------------------------------------RRSLEETE-----------E------F--LAR 220 (434)
T ss_pred ------------------------------------------------HHhcCCCH-----------H------H--HHh
Confidence 01000000 0 0 000
Q ss_pred hhcccccccchhhcchhHHHhhcchhHHHHHH-HHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhcc
Q 009130 305 VTAAFDDKILKDEEDMNLLQAMCTGNFWFLCI-ATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRF 382 (543)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~ 382 (543)
+++. +.+...++..+++..+.... ..++.....+....+.|.++++ .|++..++++...+..+++.++++
T Consensus 221 ----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (434)
T PRK15075 221 ----KHRP----SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLP 292 (434)
T ss_pred ----hhcc----ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00011223344555554332 2333334455677788999876 699998988888899999999999
Q ss_pred ccccchhhhhhhcCCCchHHHHHHHHHHHH-HHHH--HhhcCc--chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchh
Q 009130 383 GAGYGSDVFLHKLGWARPIFMVITLVAMSI-GHIA--IASGFP--GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMG 457 (543)
Q Consensus 383 ~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i-~~~~--~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g 457 (543)
+.|+++||++|| +.+..+.+...+ .... ....++ ........+.+++.+...+....+..|.+|++.++
T Consensus 293 ~~g~l~Dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg 366 (434)
T PRK15075 293 IGGALSDRIGRR------PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRT 366 (434)
T ss_pred HHHHHHHHhcch------HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccc
Confidence 999999999754 344333332222 2111 111222 12233344556677766666677889999999999
Q ss_pred hHHHHH-Hhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 458 TIFNTI-SIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 458 ~~~g~~-~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
++.|+. +++..+++. ++|.+.|++.|..|
T Consensus 367 ~~~g~~~~~~~~~~g~-~~p~~~g~i~~~~g 396 (434)
T PRK15075 367 AGFSLAYSLATAIFGG-FTPAISTWLIHVTG 396 (434)
T ss_pred hheeHHHHHHHHHHhh-hHHHHHHHHHHhcC
Confidence 999986 444445453 67889999999876
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=1.6e-26 Score=234.51 Aligned_cols=349 Identities=11% Similarity=0.051 Sum_probs=243.5
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
+......|.+++|+|++.++.+++.+...++.. .+++.|++.||+| ||+++.++.++++++.++
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYS---------------LKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCc---------------cHHHHHHHHHHHHHHHHH
Confidence 455667799999999999999977777777776 6889999999999 999999999999999998
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++++++ ++.+++.|+++|++.+...+.....+.+++| ++|++++++...+..+|..+++++++.+.+..+|
T Consensus 85 -----~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 156 (382)
T PRK10091 85 -----FTLSSS---YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW 156 (382)
T ss_pred -----HHHhCc---HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH
Confidence 777776 8999999999999999988888888899998 5799999999999999999999998888777778
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.+....+...+..+....
T Consensus 157 r~~f~~~~~~~~~~~~~~~~------------------------------------------------------------ 176 (382)
T PRK10091 157 RYTFLLIAVFNIAVLASIYF------------------------------------------------------------ 176 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------------------------------------------------
Confidence 87776655433221111000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..++. ++ + + +.+ . ....+.++++.+|......++.....+.
T Consensus 177 ---~lp~~---~~---~--------------~-----------~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (382)
T PRK10091 177 ---WVPDI---RD---E--------------A-----------KGG-L----REQFHFLRSPAPWLIFAATMFGNAGVFA 217 (382)
T ss_pred ---hCCCC---Cc---c--------------c-----------ccC-H----HHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 00000 00 0 0 000 0 0113456777777766555544333334
Q ss_pred hhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hcCcch
Q 009130 348 TMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA--SGFPGN 424 (543)
Q Consensus 348 ~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~~~~~~ 424 (543)
...+.+++.+ ..|+++.+.+.+.++..++.++++++.|++.||+++| +.+..+..+..++.+++. .++...
T Consensus 218 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~ 291 (382)
T PRK10091 218 WFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL------RIAAVTDFIIVLALLMLFFFGGMKTA 291 (382)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch------hHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4455555665 4799999999999999999999999999999999643 455556666565554432 223333
Q ss_pred HHHHHHHHHhhhhhhhhhHH-HHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMP-TITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
..+..++.+++..+..+... ....+..+++..+.+. .+....+|. .++|.+.|.+.|..+ +|+..
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~-~~Gp~~~G~l~~~~~-----------~~~~~ 357 (382)
T PRK10091 292 SLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGS-AIGAYCGGMMLTLGL-----------AYNYV 357 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHH-HHHHHHhHHHHHccc-----------CcchH
Confidence 34444455555444333333 3344545555555543 345567787 488999999999755 39999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009130 504 FMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~ 520 (543)
+.+.++.+++.......
T Consensus 358 ~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 358 ALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99887766665554433
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=8.9e-28 Score=244.96 Aligned_cols=383 Identities=13% Similarity=0.034 Sum_probs=256.9
Q ss_pred ccchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccc
Q 009130 7 LSTNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTR 84 (543)
Q Consensus 7 ~~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~ 84 (543)
+.++++|..++.+.+..+..+. .+.++.+.|.+.+++|.+..+.+++.+...++.. ..++.|++.||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--------- 80 (398)
T TIGR00895 10 PLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG--------- 80 (398)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh---------
Confidence 3445566666655555544443 4556778899999999999999977777766665 6789999999999
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHH
Q 009130 85 TRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGIL 163 (543)
Q Consensus 85 ~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~ 163 (543)
||+++..+.++.+++.++ ..++++ ++.+++.|++.|++.+...+....++.|++| ++|++++++.
T Consensus 81 ------~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 146 (398)
T TIGR00895 81 ------RKRVLLWSILLFSVFTLL-----CALATN---VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLM 146 (398)
T ss_pred ------hHHHHHHHHHHHHHHHHH-----HHHccc---hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhH
Confidence 999999999999988888 555665 7888999999999999999999999999998 6799999999
Q ss_pred HHhhhhhHHHHHHHHHHhcCCCchhHHHHHHH-HHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHH
Q 009130 164 KGFVGLSGAVLTQVYKTVCNGNPSTYILVLAL-LPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVM 242 (543)
Q Consensus 164 ~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (543)
..+..+|..+++.+.+.+.+..+|++.+.... ++.+..++...++++.++...++ +........
T Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------- 211 (398)
T TIGR00895 147 FCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIV-------------- 211 (398)
T ss_pred hhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHH--------------
Confidence 99999999999999998887777877666553 44443333333433322100000 000000000
Q ss_pred hhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhH
Q 009130 243 ENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNL 322 (543)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (543)
++..++.. + +.++. .++++ ++.+..++.....
T Consensus 212 ------------------------------~~~~~~~~---~----~~~~~-----~~~~~------~~~~~~~~~~~~~ 243 (398)
T TIGR00895 212 ------------------------------NAIAPQMQ---A----EAQSA-----LPEQK------ATQGTKRSVFKAL 243 (398)
T ss_pred ------------------------------HHHHHhcc---c----ccccc-----ccccc------cccchhhHHHHHH
Confidence 00000000 0 00000 00000 0000000000111
Q ss_pred HHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 323 LQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 323 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
++..+.+..+.+.+..++..........+.|.+.++.|+++.+.+...++..++..+++++.|+++||+++| ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~ 317 (398)
T TIGR00895 244 FQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR------VT 317 (398)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH------HH
Confidence 111123344444444444445555566777877788899999999999999999999999999999999643 33
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGR 481 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~ 481 (543)
.....+..+....+.. ..+....++..++.|++.+...+...+++.|.+|+++++++.|+.+....+|.. ++|.+.|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~g~~~~G~ 396 (398)
T TIGR00895 318 ALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAI-IGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHhHHh
Confidence 3333333333333332 344455666778889999988888999999999999999999999998999984 88888886
Q ss_pred h
Q 009130 482 I 482 (543)
Q Consensus 482 l 482 (543)
+
T Consensus 397 l 397 (398)
T TIGR00895 397 L 397 (398)
T ss_pred c
Confidence 5
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=4.4e-26 Score=235.09 Aligned_cols=379 Identities=11% Similarity=0.017 Sum_probs=242.9
Q ss_pred hhHHHHHHHHHHHHHcC-CccccccccHH-HHhhc--CCChhhHHHHHHH-----hhhcc-cccchhhHhhhhccccccc
Q 009130 11 SKWIATVASIWIQCSVG-TTYTFSIYSST-LKSTQ--NYDQSTLERVAVF-----KDMGG-SAGILSGLLFSYVTLNHHH 80 (543)
Q Consensus 11 ~~w~~~~~~~~~~~~~g-~~~~~~~~~~~-l~~~~--~~s~~~~~~~~~~-----~~~~~-~~~~~~G~l~d~~g~~~~~ 80 (543)
++|.+...+.+.....+ ....++.+.|. +.+++ +.++. .+++.+. ..++. ..+++.|+++||+|
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~G----- 92 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLG----- 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc-----
Confidence 44554444444444433 34456666664 55565 66666 3443221 11222 24677899999998
Q ss_pred ccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHH--------HHHHHHHHHhcCcchhhhhHHHHHhhhc
Q 009130 81 HQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVP--------LMCLFIFTAAHAQNFFNTGNIVTGVMNF 152 (543)
Q Consensus 81 ~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~g~g~~~~~~~~~~~~~f 152 (543)
||+++..+.+++++++++ ++++++ +. .++++|+++|++.|..++....+++||+
T Consensus 93 ----------rr~~l~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 93 ----------RKRMLMLTVWMMGIATAL-----IGLLPS---FSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred ----------cHHHHHHHHHHHHHHHHH-----HhcCCc---HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 999999999999999999 888887 44 4788999999999999999999999999
Q ss_pred C-CCCcchhHHHHHhhhhhHHHHHHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhh
Q 009130 153 G-HYSGTIVGILKGFVGLSGAVLTQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLN 223 (543)
Q Consensus 153 p-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (543)
| ++||+..+....+..+|..+++.+...+. ...+||+.+++..++.++.+. ..+..|
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~---l~~~~~----------- 220 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALW---VRNGME----------- 220 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHH---HHHhCC-----------
Confidence 8 68999999999999999988877766543 234677777665554322110 000000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCcc
Q 009130 224 AFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDES 303 (543)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (543)
|+++..+ +. ++.++
T Consensus 221 --------------------------------------------------es~~~~~---~~-----------~~~~~-- 234 (438)
T PRK09952 221 --------------------------------------------------ESAEFEQ---QQ-----------HEQAA-- 234 (438)
T ss_pred --------------------------------------------------CChhHHH---HH-----------hhccc--
Confidence 0000000 00 00000
Q ss_pred chhcccccccchhhcchhHHHhhcchhHHHHHHH-HHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhc
Q 009130 304 KVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIA-TLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGR 381 (543)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~-~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~ 381 (543)
.++ +....+..+++++.|...+. .++.....+....+.|.+.+ +.|++.+.......+.++...++.
T Consensus 235 ------~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~ 303 (438)
T PRK09952 235 ------AKK-----RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI 303 (438)
T ss_pred ------ccc-----cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 00111234567776665543 33334445556677887775 468887766556667777888899
Q ss_pred cccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCcch-HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcch
Q 009130 382 FGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----SGFPGN-LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHM 456 (543)
Q Consensus 382 ~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----~~~~~~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~ 456 (543)
++.|+++||++|| +.+..+.++.+++.+.+. ..+... ..+..++.+++.+...+..+++++|.+|++.|
T Consensus 304 ~~~g~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r 377 (438)
T PRK09952 304 PCFAWLADRFGRR------RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYR 377 (438)
T ss_pred HHHHHHHHHhCch------HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchh
Confidence 9999999999654 445555444444332221 122222 23344555777777778888999999999999
Q ss_pred hhHHHHHH-hhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 457 GTIFNTIS-IACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 457 g~~~g~~~-~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+++.|+.+ ++..+++ .++|.+.+++.|..+. +|...+.+.+++.+++.+..+.+
T Consensus 378 ~tg~g~~~~~~~~lgg-~~~p~i~g~l~~~~~~----------~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 378 YSGAGVGYQVASVVGG-GFTPFIAAALVTYFGG----------SWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHhHHHHHHHHHHH-HHHHHHHHHHHHhcCC----------CchHHHHHHHHHHHHHHHHHHHc
Confidence 99999965 4455777 4889999999886531 37788887777777777665544
No 40
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=2.2e-26 Score=233.45 Aligned_cols=341 Identities=11% Similarity=0.063 Sum_probs=242.1
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
...+.+.|.+.+|+|.|..|++++.+.+.++.. .+++.|++.||+| ||+++..+.++.+++..+
T Consensus 23 ~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g---------------~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 23 AVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIG---------------FNRSYYLASLIFAAGCAG 87 (381)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---------------HHHHHHHHHHHHHHHHHH
Confidence 345677899999999999999988888787776 6889999999999 999999999999999888
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++.+++ ++.+++.|+++|++.+...+.....+.++.| ++|++++++...+.++|..+++.+.+.+.+...+
T Consensus 88 -----~~~~~~---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 159 (381)
T PRK03633 88 -----LGLMVG---FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMS 159 (381)
T ss_pred -----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 666666 7899999999999999888877777778886 6899999999999999999999888876543211
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
...+....+.. ..+.+.
T Consensus 160 ~~~~~~~~~~~------------------------------------------------------------~~~~~~--- 176 (381)
T PRK03633 160 VLPWVTGLVLA------------------------------------------------------------AILPLL--- 176 (381)
T ss_pred hHHHHHHHHHH------------------------------------------------------------HHHHHH---
Confidence 11111000000 000000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..+.++++ + + + + +..+.++.++++.++......+........
T Consensus 177 ---~~~~~~~~-~------------------~----------~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (381)
T PRK03633 177 ---FTRILNQQ-A------------------E----------N-H-----DSTSIWPMLKLRQARLGVNGCIISGIVLGS 218 (381)
T ss_pred ---HhcccCCC-C------------------C----------C-C-----CCCCHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 00110000 0 0 0 0 001234556777777554333332222333
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHH
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFV 427 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 427 (543)
...++|.+.++.|.++++.+...+...++..++++..|++.||+++| +.+..+.....++...+. .....+.
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~------~~l~~~~~~~~~~~~~~~--~~~~~~~ 290 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL------LVLRVQVFVVILGSIAML--SQAAMAP 290 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH------HHHHHHHHHHHHHHHHHh--hhHHHHH
Confidence 45567888888899999999999999999999999999999999644 555556555555544333 1223334
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIM 507 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~ 507 (543)
...+.|++.....+...+.+.|..|+++++...+..+....+|. .++|.+.|++.|..+ ++..|++.
T Consensus 291 ~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~igp~~~G~l~~~~g------------~~~~f~~~ 357 (381)
T PRK03633 291 ALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGS-LLGPSFTAMLMQNYS------------DNLLFIMI 357 (381)
T ss_pred HHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC------------ccHHHHHH
Confidence 55666776666677777778898988888888888888888998 589999999999887 88888887
Q ss_pred HHHHHHHH
Q 009130 508 AFVAFFGS 515 (543)
Q Consensus 508 ~~~~~~~~ 515 (543)
+.+.++..
T Consensus 358 ~~~~l~~~ 365 (381)
T PRK03633 358 ASVSFIYL 365 (381)
T ss_pred HHHHHHHH
Confidence 76665444
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=1.5e-26 Score=242.56 Aligned_cols=381 Identities=12% Similarity=0.054 Sum_probs=267.5
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
...+...|.+.+++|.+..+.+++.+.+.++.. ..++.|++.||+| ||+++..+.++++++.++
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFG---------------TRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhC---------------cHHHHHHHHHHHHHHHHH
Confidence 345677899999999999999988888887776 6778999999999 999999999999999999
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++.+++ ++.+++.|+++|++.+...+....++.+++| ++|++++++...+..+|..+++.+++.+.+..+|
T Consensus 84 -----~~~~~~---~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 155 (485)
T TIGR00711 84 -----CGVAPN---LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW 155 (485)
T ss_pred -----HhCcCC---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc
Confidence 777776 7999999999999999999999999999998 6899999999999999999999999999888889
Q ss_pred hHHHHHHHHHHHHHHHHHh-heeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHH-hhcccchhhHHHHHHH-HHHHHh
Q 009130 188 TYILVLALLPTLVSLLFMS-HVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVM-ENLLTFSLWARIITFI-ILLLLL 264 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 264 (543)
++.+....+..++...... ..++.++ +.++..+.........+......... ++..++.+........ ......
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFILPRDKP---AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAI 232 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHcCCccc---cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHH
Confidence 9888877665555544333 3332211 11111111111111111111111111 1111221111111110 000000
Q ss_pred hcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhch
Q 009130 265 ASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGS 344 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~ 344 (543)
.... .++. + ++ +.....+.++++.++...+..++....
T Consensus 233 ~~~~---~~~~----~------------------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (485)
T TIGR00711 233 IAFV---VWEL----T------------------------------DD-----NPLVDLRLFKYRNFTIGCVYMSLLGLG 270 (485)
T ss_pred HHHH---HHHH----c------------------------------CC-----CCccCHHHHcCCChHHHHHHHHHHHHH
Confidence 0000 0000 0 00 001114577889888887777777666
Q ss_pred hhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h--c
Q 009130 345 GIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-S--G 420 (543)
Q Consensus 345 ~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~--~ 420 (543)
.+....++|.++++ .|+++.+++....+..++..+++++.|++.||+++| +.+..+.++.++++.++. . .
T Consensus 271 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~------~~~~~g~~~~~~~~~~~~~~~~~ 344 (485)
T TIGR00711 271 LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR------KLVTIGLILYAVGFYWRAFTFTP 344 (485)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH------HHHHHHHHHHHHHHHHHhccCCC
Confidence 67777788988876 699999999999999999999999999999999643 566667777777666554 1 1
Q ss_pred --CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Q 009130 421 --FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 421 --~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~ 485 (543)
+........++.|++.+..++.....+.+..|+++++++.|+.+....+|+. +++.+.|.+.+.
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~i~g~~~~~ 410 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS-IGTALITTILTN 410 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1223455567788888887777777777889999999999999999888884 788788887764
No 42
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3.6e-26 Score=232.87 Aligned_cols=348 Identities=11% Similarity=0.062 Sum_probs=235.7
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
+.+..++.+|+|.|..+.+++.+.+.++.. .+++.|+++||+| ||+++..+.+.+.++.+...+
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g---------------~r~~l~~~~~~~~~~~~~~~~ 100 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYG---------------AKRSALQGMLACGLAGLAYLL 100 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhc---------------chHHHHHHHHHHHHHHHHHHh
Confidence 344346789999999999977777777765 7999999999999 999999998887776543211
Q ss_pred HHhccCCC--CChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 112 SVVGLLPR--PVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 112 ~~~~~~~~--~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
++..+. ..+++.+++.|+++|+|.+...+...+.+.+++| ++|++++++...+..+|.++++++++.+.+..+|+
T Consensus 101 --~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 101 --AAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred --hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 222111 0137888999999999999888888888899998 78999999999999999999999988876655565
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+...+..+..++.+ .+
T Consensus 179 ~~~~~~~~~~~~~~---~~------------------------------------------------------------- 194 (392)
T PRK12382 179 ALALTTMVLPLLAW---AF------------------------------------------------------------- 194 (392)
T ss_pred HHHHHHHHHHHHHH---HH-------------------------------------------------------------
Confidence 44332221111000 00
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
.++.+++++ + + + ++. +.++.++ .+|...+..++........
T Consensus 195 ---~~~~~~~~~----------------~-~-~--------~~~--------~~~~~~~--~~~~~~~~~~l~~~~~~~~ 235 (392)
T PRK12382 195 ---NGTVRKVPA----------------H-A-G--------ERP--------SLWSVVG--LIWKPGLGLALQGVGFAVI 235 (392)
T ss_pred ---HHhccCCCC----------------C-c-c--------cCc--------hHHHHHH--HHHHhHHHHHHHHHHHhHH
Confidence 001011000 0 0 0 000 0011111 1111111111111222234
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHH
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFV 427 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 427 (543)
..+.+.++++.|++ +.+...+...++..+++++.|++.||+++| +.+..+..+..++.+++. .++....++
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (392)
T PRK12382 236 GTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV------KVAIVSLLVETVGLLLLWLAPTAWVALA 307 (392)
T ss_pred HHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC------eehHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 45667777777765 355666778888899999999999999754 345555555555555544 344444556
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIM 507 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~ 507 (543)
..++.|++.+...+.....+.|.+|++++|++.|+.+....+|.. ++|.+.|.+.|..| |+..|.+.
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-ig~~~~g~l~~~~g------------~~~~~~~~ 374 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG-VSGPLAGMLATSFG------------YPSVFLAG 374 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhC------------chHHHHHH
Confidence 677788888877777778888999999999999999999999884 88999999999887 99999999
Q ss_pred HHHHHHHHHHHHHH
Q 009130 508 AFVAFFGSLVAFLL 521 (543)
Q Consensus 508 ~~~~~~~~i~~~~~ 521 (543)
+++.+++.++.+..
T Consensus 375 ~~~~~~~~~~~~~~ 388 (392)
T PRK12382 375 AISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHhh
Confidence 88888777765544
No 43
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=5.3e-27 Score=240.95 Aligned_cols=365 Identities=10% Similarity=-0.015 Sum_probs=253.6
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
....|.+.++++.++.+.+++.+...++.. .+++.|++.||+| ||+++..+.++.+++......
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g---------------~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYD---------------RKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcC---------------CceEEEehHHHHHHHHHHHHH
Confidence 455688888899999999988787777776 6889999999999 999999888888877766332
Q ss_pred HHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHH
Q 009130 112 SVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYI 190 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~ 190 (543)
......++ ++.+++.|+++|++.+...++....+.+++| ++|+++.++...+.++|..+++.+++.+.+..+|+|.
T Consensus 102 ~~~~~~~~---~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~ 178 (417)
T PRK10489 102 NAFLPEPS---LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWN 178 (417)
T ss_pred HHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHH
Confidence 11111233 7888889999999988888888888999998 6799999999999999999999998887665556655
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccc
Q 009130 191 LVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRV 270 (543)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (543)
+....+..++..+....
T Consensus 179 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 195 (417)
T PRK10489 179 YGLAAAGTFITLLPLLR--------------------------------------------------------------- 195 (417)
T ss_pred HHHHHHHHHHHHHHHHh---------------------------------------------------------------
Confidence 55443332221111100
Q ss_pred ccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhh
Q 009130 271 AITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMN 350 (543)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~ 350 (543)
.++.+++++ +. +++.++.....+..+++|.++...+..++... ...+..
T Consensus 196 -l~~~~~~~~-----------------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 244 (417)
T PRK10489 196 -LPALPPPPQ-----------------PR------------EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRV 244 (417)
T ss_pred -CCCCCCCCc-----------------cc------------ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHH
Confidence 011000000 00 00001111234556778877665554443322 234556
Q ss_pred chHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHH
Q 009130 351 NIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVG 428 (543)
Q Consensus 351 ~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 428 (543)
+.|.+.++ .|+++.+.+++.+...++..++.++.+++.||.+ +++.+..+.++..++.+++. .++.....+.
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSAR------PGLLMLLSTLGSFLAVGLFGLMPMWILAVLC 318 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccC------cchHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 77888887 7999999999999999999999999999998752 23455556666666655554 3333344556
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 429 TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 429 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
.++.|++.+...+...+++.|..|++.+|++.|+.+....+|. .++|.+.|.+.|..| ++..++..+
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~g~~l~G~l~~~~g------------~~~~~~~~~ 385 (417)
T PRK10489 319 LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGD-AIGAALLGGLGAMMT------------PVASASASG 385 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhH-hHHHHHHHHHHHHhc------------hhhHHHHHH
Confidence 6677887776666667888999999999999999998888888 489999999999887 677777776
Q ss_pred HHHHHHHHHHHHHhhcchhh
Q 009130 509 FVAFFGSLVAFLLFLRTRRF 528 (543)
Q Consensus 509 ~~~~~~~i~~~~~~~~~~~~ 528 (543)
+..++..++.....++.|+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 386 FGLLIIGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHHHHHHhccccccc
Confidence 65555555544444444443
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=8.8e-27 Score=245.06 Aligned_cols=390 Identities=12% Similarity=0.074 Sum_probs=249.6
Q ss_pred cchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
.++++|..+....+..+..+. .+..+...|.+.+++|+++.+.+++.+.+.++.. .+++.|++.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---------- 83 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYG---------- 83 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 345566655444444333332 3445667799999999999999977666666665 6889999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
||+++.++.++.+++.++ .+++++ ++.+++.|++.|++.+..++....++.+++| ++|++++++..
T Consensus 84 -----~r~~~~~~~~~~~~~~~~-----~~~~~~---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 150 (496)
T PRK03893 84 -----RRLAMVISIVLFSVGTLA-----CGFAPG---YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLI 150 (496)
T ss_pred -----cHHHHHHHHHHHHHHHHH-----HHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 999999999999999988 556665 7889999999999999999999999999998 67999999999
Q ss_pred HhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 165 GFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
.+..+|..+++.+...+.+..+|++.+.++.++..+.++.. ...|++
T Consensus 151 ~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~---~~~p~~------------------------------ 197 (496)
T PRK03893 151 SGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLR---KNLPEA------------------------------ 197 (496)
T ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH---HhCCCc------------------------------
Confidence 99999999999999998888889888876555443322111 111110
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcc----h
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEED----M 320 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 320 (543)
+ +.++ +.+ +.++ ..+..+.....++........ .
T Consensus 198 -------------------------------~-~~~~--~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (496)
T PRK03893 198 -------------------------------E-DWKE--KHA--GKAP------VRTMVDILYRGEHRIINILLTLAAAA 235 (496)
T ss_pred -------------------------------h-hhhh--hcc--cccc------chhHHHHHhcchhHHHHHHHHHHHHH
Confidence 0 0000 000 0000 000000000000000000000 0
Q ss_pred hHH-----------------------------H--hhcchhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHH
Q 009130 321 NLL-----------------------------Q--AMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINS 368 (543)
Q Consensus 321 ~~~-----------------------------~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~ 368 (543)
... + ..+.+.+.......+......+....++|.+++ +.|+++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~ 315 (496)
T PRK03893 236 ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN 315 (496)
T ss_pred HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH
Confidence 000 0 000011111111111111112234567788885 78999999999
Q ss_pred HHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcc--hHHHHHHHHHhhhhhhhhhHHH
Q 009130 369 LISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPG--NLFVGTMIVGVCYGSQWSLMPT 445 (543)
Q Consensus 369 ~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~--~~~~~~~l~G~~~g~~~~~~~~ 445 (543)
+.+...++..+++++.|+++||+++| +.+..+.++..+..+.+. ..+.. ......++.+....+..+..+.
T Consensus 316 ~~~~~~~~~~~g~~~~g~l~dr~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 316 VLFFSGFGAAVGCCVGGFLGDWLGTR------KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch------HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHH
Confidence 99999999999999999999999654 455555544444433322 22222 1222223333333334556778
Q ss_pred HHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHH
Q 009130 446 ITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 446 ~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
++.|.+|++++++++|+.+....+|+ .++|.+.|.+.|..| |+..+...++.+.+.
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~-~lgp~l~g~l~~~~g------------~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGG-ALAPILGALIAQRLD------------LGTALASLSFSLTFV 445 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHH-HHHHHHHHHHhccCC------------hHHHHHHHHHHHHHH
Confidence 88999999999999999988888988 489999999999887 777776655444443
No 45
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=5.8e-26 Score=231.33 Aligned_cols=378 Identities=9% Similarity=0.069 Sum_probs=252.3
Q ss_pred cccccccchhhHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhccccccc
Q 009130 2 RMEERLSTNSKWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHH 80 (543)
Q Consensus 2 ~~~~~~~~~~~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~ 80 (543)
||+|-++-.+ ++.+...++..+. ....++.+.+++++++|++..+.+.+.+...+.. ..+++.|++.||+|
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g----- 74 (400)
T PRK11646 3 RVSQARNLGK-YFLLIDNMLVVLG--FFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFG----- 74 (400)
T ss_pred CCcccccccH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhC-----
Confidence 4555433333 5544444433332 2334677777889999999999996666555554 47889999999999
Q ss_pred ccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcch
Q 009130 81 HQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTI 159 (543)
Q Consensus 81 ~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~ 159 (543)
||+++..+.++.+++.++ +..+++ ++.+++.|+++|++.+...+.....+.+++| ++|+++
T Consensus 75 ----------~k~~l~~~~~~~~~~~~~-----~~~~~~---~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a 136 (400)
T PRK11646 75 ----------AKPMIVTGMLMRAAGFAT-----MAIAHE---PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRF 136 (400)
T ss_pred ----------chHHHHHHHHHHHHHHHH-----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999999999988 555555 7888999999999998888888888999998 689999
Q ss_pred hHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHH
Q 009130 160 VGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVI 239 (543)
Q Consensus 160 ~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (543)
+|+......+|..++|++++.+. ..+|++.+....+..++..+...+
T Consensus 137 ~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~-------------------------------- 183 (400)
T PRK11646 137 FSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAW-------------------------------- 183 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 99999999999999999998886 455666555443322221100000
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcc
Q 009130 240 TVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEED 319 (543)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (543)
.. + +.++ + + .++ +..
T Consensus 184 -------------------------------~~-~--~~~~---~--------------~----------~~~----~~~ 198 (400)
T PRK11646 184 -------------------------------LL-P--AYKL---S--------------T----------VRT----PVR 198 (400)
T ss_pred -------------------------------hC-C--cccc---c--------------c----------cch----hhH
Confidence 00 0 0000 0 0 000 011
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
..+++.++++.++...+..+...........+.|.+.++.+.++.+.+.+.++.++....+....+++.||.. +.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~-----~~ 273 (400)
T PRK11646 199 EGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRF-----RL 273 (400)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ch
Confidence 2345677888887665554433333333455678888887667788888888877766655555555555421 11
Q ss_pred hHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRI 478 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l 478 (543)
+..+..+.++..++.+++. .++.....+..++.+++.+...+...+++.+..|++++|+++|+.+....+|. .++|.+
T Consensus 274 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~ig~~l 352 (400)
T PRK11646 274 EHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG-AIGYIG 352 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH-Hhcccc
Confidence 2334455555566655554 33444444555667777777777788899999999999999999999999998 489999
Q ss_pred hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHH
Q 009130 479 IGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 479 ~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
.|.+.|..++. ..+...++......+++.+.
T Consensus 353 ~G~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 353 GGWLFDLGKAL--------NQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred hHHHHHHHhhc--------CCcchHHHHHHHHHHHHHHH
Confidence 99999986420 11345555555555554433
No 46
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.8e-27 Score=241.89 Aligned_cols=372 Identities=13% Similarity=0.072 Sum_probs=269.6
Q ss_pred HhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCC
Q 009130 40 KSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLP 118 (543)
Q Consensus 40 ~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 118 (543)
..++++|..|-+++-+.+..|+. .++|.|+++|||| .|+++..+.++.++++++ ...+.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G---------------~r~v~~~~~~~sa~~t~l-----~P~aa 124 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFG---------------ARRVFFISGLISALLTLL-----TPLAA 124 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcC---------------chHHHHHHHHHHHHHHHH-----HHHHH
Confidence 45799999999988888888887 6779999999999 999999999999999999 44333
Q ss_pred CCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC-CchhHHHHHHHH
Q 009130 119 RPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG-NPSTYILVLALL 196 (543)
Q Consensus 119 ~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~ 196 (543)
+. .++.+++.|++||++.|..+|+...+.++|.| +||++..++..++..+|.++.-++.+.+.+. .+|++.+++.+.
T Consensus 125 ~~-~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~ 203 (466)
T KOG2532|consen 125 SI-GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGI 203 (466)
T ss_pred Hh-cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHH
Confidence 22 25677889999999999999999999999998 7999999999999999999999999999987 788877766554
Q ss_pred HHHHH-HHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccc
Q 009130 197 PTLVS-LLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITAD 275 (543)
Q Consensus 197 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (543)
..++. ++...+..+.
T Consensus 204 ~g~i~~~~w~~~~~d~---------------------------------------------------------------- 219 (466)
T KOG2532|consen 204 VGLIWFILWFLFYSDS---------------------------------------------------------------- 219 (466)
T ss_pred HHHHHHHHHHHHhcCC----------------------------------------------------------------
Confidence 44332 3322232222
Q ss_pred cccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHH
Q 009130 276 REDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQV 355 (543)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 355 (543)
|++++ ..+++|.+..++ ...+++.++..+.+++++++++.+|.+++..+......+.+..+.|.|
T Consensus 220 P~~h~------------~is~~El~~I~~---~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY 284 (466)
T KOG2532|consen 220 PSKHP------------NISEKELKYIEK---GKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTY 284 (466)
T ss_pred cccCC------------CCCHHHHHHHHh---cccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 22111 001111000000 000000111134678999999999999999999988889999999999
Q ss_pred HHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCC----CchHHHHHHHHHHHHHHHHHhh-cC-cchHHHH
Q 009130 356 GES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW----ARPIFMVITLVAMSIGHIAIAS-GF-PGNLFVG 428 (543)
Q Consensus 356 ~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~----~r~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~ 428 (543)
+++ +|+|..+.|++.++..+...+.++++|.++||+.+| .. .|+..-.++....+++++.+.. +. .....+.
T Consensus 285 ~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~ 363 (466)
T KOG2532|consen 285 LKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVI 363 (466)
T ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHH
Confidence 987 699999999999999999999999999999999765 22 3455555566666666666653 22 2212222
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 429 TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 429 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
.+....+..+..............+++.+...|+.+....+.+ +++|.+.|.+.... + ...|+..|++.+
T Consensus 364 ~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~-~~~P~~vg~~~~~~-t--------~~eW~~VF~i~a 433 (466)
T KOG2532|consen 364 LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAG-FIAPLLVGIIVTDN-T--------REEWRIVFLIAA 433 (466)
T ss_pred HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHH-HHHHHheeeEeCCC-C--------HHHHHHHHHHHH
Confidence 2223333333322222223333256899999999999999998 48999999888421 1 124999999999
Q ss_pred HHHHHHHHHHHHHh
Q 009130 509 FVAFFGSLVAFLLF 522 (543)
Q Consensus 509 ~~~~~~~i~~~~~~ 522 (543)
++.+++.++..++.
T Consensus 434 ~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 434 GILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHhchheeEee
Confidence 99999987755554
No 47
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.3e-25 Score=229.98 Aligned_cols=356 Identities=12% Similarity=-0.029 Sum_probs=248.2
Q ss_pred cchhhHHHHHHHHHHHHHcC-CccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 8 STNSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 8 ~~~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
.+++.|+..+...+..+... ....+.+..|.+.+|+|+|+.+.++..+.+.++.. .+++.|.+.||+|
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g---------- 76 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIG---------- 76 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 35566666555555443322 23334455688999999999999977777777765 6789999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
||+++..+.++.+++.++ ...+++ ++.+++.|+++|++.+...+.....+.|++| ++|++++++..
T Consensus 77 -----~r~~l~~~~~~~~~~~~~-----~~~~~~---~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 143 (406)
T PRK15402 77 -----RRPVMLAGVAFFILTCLA-----ILLAQS---IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMA 143 (406)
T ss_pred -----ChHHHHHHHHHHHHHHHH-----HHHHcc---HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 999999999999998888 555665 7888999999999999888888889999998 56888899998
Q ss_pred HhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh
Q 009130 165 GFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMEN 244 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (543)
....++..++|.+.+.+.+...|++.+....+..++..+...+
T Consensus 144 ~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~------------------------------------- 186 (406)
T PRK15402 144 NVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR------------------------------------- 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH-------------------------------------
Confidence 8888999999998888876667776665444333222111000
Q ss_pred cccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHH
Q 009130 245 LLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQ 324 (543)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (543)
..++ +++ + . + ++. +.++.....++
T Consensus 187 --------------------------~~~~---~~~---~--------------~-~--------~~~-~~~~~~~~~~~ 210 (406)
T PRK15402 187 --------------------------AMPE---TAG---R--------------V-G--------EKL-SLKELGRDYKL 210 (406)
T ss_pred --------------------------hCCC---CCc---c--------------c-c--------ccc-cHHHHHHHHHH
Confidence 0000 000 0 0 0 000 00111233467
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 325 AMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 325 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
.+++|.++...+..++..........+.|.+++ +.|+++.+.+.......++..+++++.|+++||+++| +.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~------~~~ 284 (406)
T PRK15402 211 VLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR------SLI 284 (406)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHH
Confidence 889999998877766655444455556677764 4799998888888888888999999999999999654 455
Q ss_pred HHHHHHHHHHHHHHhh------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIAS------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
..+.+...++..++.. .+..+..+..++.|++.+...+........ .+++++|++.+..++...++. .+++.
T Consensus 285 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~-~~g~~ 362 (406)
T PRK15402 285 RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIF-TVGIE 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHH-HHHHH
Confidence 5565555555444331 122334556777888887766655554433 345899999999999998888 48888
Q ss_pred hhhhhhhhcc
Q 009130 478 IIGRIYDRVA 487 (543)
Q Consensus 478 l~g~l~~~~g 487 (543)
+.+.+++..+
T Consensus 363 ~~~~l~~~~~ 372 (406)
T PRK15402 363 LSKHAYLGGG 372 (406)
T ss_pred HHHhcccCCc
Confidence 9999988776
No 48
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=2e-26 Score=231.52 Aligned_cols=332 Identities=12% Similarity=0.033 Sum_probs=240.8
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
..+++...|.+.+|+|++.++.+++.+...++.. .+++.|++.||+| +|+++.++.++.+++.+
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~ 80 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFG---------------EERSVAAGLLLIAAGIL 80 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC---------------chHHHHHHHHHHHHHHH
Confidence 3467888999999999999999988777777775 7889999999999 99999999988888877
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC--
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN-- 185 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~-- 185 (543)
. + .+++ .+.+++.|++.|+|.+...+.....+.+++|++|++++++...+.++|..+++.+...+.+..
T Consensus 81 ~-----~-~~~~---~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~ 151 (355)
T TIGR00896 81 I-----R-SAPG---TALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG 151 (355)
T ss_pred H-----H-Hhcc---HHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 6 5 4454 688889999999999988887888889999999999999999999999999988877765432
Q ss_pred chhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhh
Q 009130 186 PSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLA 265 (543)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (543)
.|++.+....+..++... .
T Consensus 152 ~w~~~f~~~~~~~~~~~~------------------------------------------------------------~- 170 (355)
T TIGR00896 152 HWQQALAWWALPALLALL------------------------------------------------------------A- 170 (355)
T ss_pred hHHHHHHHHHHHHHHHHH------------------------------------------------------------H-
Confidence 255444332221111000 0
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchh
Q 009130 266 SPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSG 345 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~ 345 (543)
. .++.+++++ + + ++. .+...++.+|+|.+|...+..++.....
T Consensus 171 ---~--~~~~~~~~~------------------~-~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (355)
T TIGR00896 171 ---W--IPQVRRRVA------------------A-N--------QTT-----TRLTPVRIWRSPLAWQVTVFFGLQSGLY 213 (355)
T ss_pred ---H--hhhhccccC------------------C-C--------CCC-----CCCCCchhhcCHhHHHHHHHHHHHHHHH
Confidence 0 000000000 0 0 000 0012245678888888777766666666
Q ss_pred hhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchH
Q 009130 346 IATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNL 425 (543)
Q Consensus 346 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~ 425 (543)
+....++|.+.++.|+|+.+.+...++..++.++++++.|++.||+++| +..+..+.++.+++.+.+........
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQ-----RGIVAVLAVLQLVGLCGLLFAPMHGL 288 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-----hHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 6777889999998999999999999999999999999999999999532 24555555555555544442221122
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcC-CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFG-VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~ 488 (543)
....++.|++.+..++...+.+.+..+ +++++.+.|+.+....++. .++|.+.|++.|..|+
T Consensus 289 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 289 WAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLA-ALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence 224567899998888777776665554 4667899999888888887 4889999999998874
No 49
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=3.6e-26 Score=240.91 Aligned_cols=387 Identities=11% Similarity=0.066 Sum_probs=257.8
Q ss_pred ccccccccHHHHhhcCCC---hhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYD---QSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFT 104 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s---~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~ 104 (543)
.|..+...|.+.+|+|++ +.+.+++.+.+.++.. .+++.|+++||+| ||+++.++.++.++
T Consensus 105 ~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~G---------------rr~~~~~~~~~~~i 169 (505)
T TIGR00898 105 EYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFG---------------RKKVLLLSTLVTAV 169 (505)
T ss_pred EecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhcc---------------chHHHHHHHHHHHH
Confidence 345557788999999999 8888988888888876 6789999999999 99999999999999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC
Q 009130 105 GYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN 183 (543)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 183 (543)
+.++ ++++++ ++.+++.|++.|++.+...+....++.|++| ++|+.+.++...+..+|.++++.++..+.+
T Consensus 170 ~~~~-----~~~~~~---~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 170 SGVL-----TAFSPN---YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred HHHH-----HHHccc---HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 9988 677776 8999999999999999999999999999998 679999999999999999998877655532
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 009130 184 GNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLL 263 (543)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (543)
|++.++...++.++..+..+++++.|.....+++...+...+.
T Consensus 242 ---wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~---------------------------------- 284 (505)
T TIGR00898 242 ---WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQ---------------------------------- 284 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHH----------------------------------
Confidence 8988888888777766665555443321000000000000000
Q ss_pred hhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhc
Q 009130 264 LASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMG 343 (543)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~ 343 (543)
+....... . .+++..+.+. +++.+ ++..+.+.++++++|.++...+...+.+.
T Consensus 285 ---------~~~~~~~~--------~----~~~~~~~~~~-----~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 285 ---------RIAKINGK--------K----LPAEVLSLSL-----EKDLS-SSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred ---------HHHHHcCC--------C----CCHHHHhhhh-----hhhhh-hccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 00000000 0 0000000000 00000 00112356788889988777665544433
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
........++.+..+.+.+. .....+.++..+++.++.+++.||++|| ..+.++.++.+++++++. .++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr------~~~~~~~~~~~~~~l~~~~~~~~ 408 (505)
T TIGR00898 338 TTAFSYYGLVLDLGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRR------YTMAASLLLAGVALLLLLFVPVD 408 (505)
T ss_pred HHHHHHHHHhccccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 22222222233333445443 2333456677888999999999999654 666667766666665554 2222
Q ss_pred --chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 423 --GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 423 --~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
....+..++.+++.+..++..+.+..|.+|++.|+++.|+.+....+|+ +++|++.+ + +..+ +
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~-~i~p~i~~-~-~~~~------------~ 473 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGS-IISPFLVY-L-GEKW------------L 473 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHH-HHHhHHHH-H-HHHH------------H
Confidence 2334445566677777788888999999999999999999999999998 48888887 4 3333 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 009130 501 MLSFMIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
..++.+.+++.+++.++.+++ +|+++
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~l-pet~~ 499 (505)
T TIGR00898 474 FLPLVLFGGLALLAGILTLFL-PETKG 499 (505)
T ss_pred hhHHHHHHHHHHHHHHHHHcC-cCCCC
Confidence 567777777777776665544 44443
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.95 E-value=2.1e-26 Score=231.89 Aligned_cols=341 Identities=11% Similarity=-0.002 Sum_probs=249.4
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
....|.+.+|++.++.+.+++.+...++.. .+++.|++.||+| ||+++..+.++..++.++...
T Consensus 19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g---------------~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYD---------------RKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc---------------hhHHHHHHHHHHHHHHHHHHH
Confidence 344577788899999999988777777775 7889999999999 999999999988888777433
Q ss_pred HHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHH
Q 009130 112 SVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYI 190 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~ 190 (543)
.......+ ++.+++.|+++|++.+...+....++.|++| ++|+++.++...+.++|.++++.+++.+.+..+|++.
T Consensus 84 ~~~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~ 160 (365)
T TIGR00900 84 VALLGGLN---IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWA 160 (365)
T ss_pred HHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 21111114 7889999999999999999999999999998 6899999999999999999999999888766667776
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccc
Q 009130 191 LVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRV 270 (543)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (543)
+....+..++..+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 178 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSV-------------------------------------------------------------- 178 (365)
T ss_pred HHHHHHHHHHHHHHHHhc--------------------------------------------------------------
Confidence 655544333222111111
Q ss_pred ccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhh-
Q 009130 271 AITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATM- 349 (543)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~- 349 (543)
+.+ ++++ + ++++. +++..++.....++.+|+|.++...+..++.........
T Consensus 179 --~~~-~~~~---~------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (365)
T TIGR00900 179 --RIP-ELAA---S------------EIQAL---------SNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIV 231 (365)
T ss_pred --ccc-cCCC---c------------ccccc---------chhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 010 0000 0 00000 000011112334667889998888777666655555444
Q ss_pred hchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cC-cchHH
Q 009130 350 NNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GF-PGNLF 426 (543)
Q Consensus 350 ~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~-~~~~~ 426 (543)
.+.|.+.++ +|.++.+.+.......++..+++++.+++.||+++| ..+..+.++..+++..+.. ++ .+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM------ALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh------HHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 677888876 799999999999999999999999999999998543 5555555555555554442 22 44456
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+..++.|++.+...+...+++.|..|+++++++.|+.+....++.. ++|.+.|.+.|..|
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~g~~~~g~l~~~~g 365 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP-LGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 6677889998888888889999999999999999999999999884 88999999988753
No 51
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=2.5e-25 Score=226.07 Aligned_cols=330 Identities=14% Similarity=0.055 Sum_probs=235.8
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
..+....|.+.+|+|.++.+.+++.+.+.++.. .+++.|++.||+| ||+++..+.++.+++.++
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g---------------~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYG---------------RRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcC---------------ChHHHHHHHHHHHHHHHH
Confidence 344556799999999999999988777777775 6889999999999 999999999999999888
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
.+.+++ ++.+++.|++.|++.+...+.....+.|++| ++|++++++......+|..+++.+.+.+.+..+|
T Consensus 87 -----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 87 -----LALSNN---IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred -----HHHHcc---HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 555665 7889999999999999999999999999998 5799999999999999999999998887766667
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.+....+..++..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------ 178 (385)
T TIGR00710 159 HAIFAFLSLAGILLSALIFF------------------------------------------------------------ 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------------------------------------------------
Confidence 66555433322221111000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..++++++++ + ++.+......++.++++.++...+...+.....+.
T Consensus 179 ---~~~~~~~~~~------------------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (385)
T TIGR00710 179 ---ILPETLPYEA------------------R-------------IQISTYFETFLLLLKSKMFWGYALIYGASFGGFFA 224 (385)
T ss_pred ---hCCCCCCCcc------------------c-------------CCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 0001000000 0 00011123346778899998877776665555566
Q ss_pred hhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh---h-c-C
Q 009130 348 TMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA---S-G-F 421 (543)
Q Consensus 348 ~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~---~-~-~ 421 (543)
...+.|.+.+ +.|+++.+.+.+.+...++..+++++.|++.||+++| +.+..+.++..++..++. . . +
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK------SLLRMGLILFAVSAVLLEITAILGLG 298 (385)
T ss_pred HHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6667787775 5799999999999999999999999999999999654 444445444444433332 1 1 1
Q ss_pred c-chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 422 P-GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 422 ~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
. ...+...++.|++.+...+.......|..| ++++++.++.+.....++.+.+| +.+.+.+
T Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 299 SWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 1 223344566788888888888888888876 67899999988776655545555 4554443
No 52
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=2.8e-25 Score=227.11 Aligned_cols=329 Identities=11% Similarity=0.040 Sum_probs=232.1
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.+.+....|.+++++|.++++.+++.+.+.++.. .+++.|++.||+| ||+++..+.++..++.+
T Consensus 22 ~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~~~~ 86 (401)
T PRK11043 22 TDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYG---------------RKPVLLAGLSLFALGSL 86 (401)
T ss_pred HHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcC---------------CcHHHHHHHHHHHHHHH
Confidence 3444555678899999999999988777777765 7889999999999 99999999999998888
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
+ +.++++ ++.+++.|+++|++.+...+.....+.|++| ++++++.+......+++..++|.+++.+.+..+
T Consensus 87 ~-----~~~~~~---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 87 G-----MLWVES---AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred H-----HHHhcC---HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8 566665 7889999999999988887777788899998 468888899888889999999999988877777
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|++.+....+..++..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------- 179 (401)
T PRK11043 159 WQAIFATLFAITLLLILPTLR----------------------------------------------------------- 179 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-----------------------------------------------------------
Confidence 777665544332221111100
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
.++++++ + ++ ++...+.++.++++.+|...+...+.....+
T Consensus 180 -----~~~~~~~-~------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (401)
T PRK11043 180 -----LKPSKKA-R------------------------------KQ---SQDALTFKQLLKSKTYLGNVLIFAACSAAFF 220 (401)
T ss_pred -----cCCCCCc-c------------------------------cc---chHHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 0010000 0 00 0011245677888888876665555555555
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH---HHHHHHHHHhh---c
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV---AMSIGHIAIAS---G 420 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~---~~~i~~~~~~~---~ 420 (543)
.+..+.|.+.++.|+++.+.+.......++..+|+++.+++.||+++| +......+ +..+.+..... .
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE------QLLPWLLVLFAVSVIAIWLASLLSHP 294 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 666778888888899999999888888888899999999999998654 22222222 22222222221 2
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
+.....+...+.|++.+..++.......+..| +++|++.|+.+.....++. .++.+.|.+.|..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~-~~~~~~g~l~~~~ 358 (401)
T PRK11043 295 SLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCF-LASLLVSALISTP 358 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHH-HHHHHHHHccCCC
Confidence 22223344556677777777777766667665 6899999999887776664 6667788887753
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=2.8e-25 Score=227.65 Aligned_cols=353 Identities=11% Similarity=0.018 Sum_probs=240.5
Q ss_pred ccccccHHHHhhcCCChhhH-----HHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTL-----ERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFT 104 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~-----~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~ 104 (543)
.+..+.|.+.+|+|++..+. +++.+...+.. ..+++.|++.||+| ||+++..+.++.++
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~~ 96 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKG---------------RKIMLLRSALGMGI 96 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhC---------------cHHHHHHHHHHHHH
Confidence 34566788888999987653 54445555554 46889999999998 99999999999888
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC
Q 009130 105 GYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN 183 (543)
Q Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 183 (543)
+.++ ....++ ++.+++.|++.|++.+. .+.....+.+++| ++|+++.++...+..+|.++++++.+.+.+
T Consensus 97 ~~~~-----~~~~~~---~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 97 VMVL-----MGLAQN---IWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HHHH-----HHHHhh---HHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887 455555 78899999999998654 5666777889998 689999999999999999999999888876
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 009130 184 GNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLL 263 (543)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (543)
...|++.+....+..++..+...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 191 (408)
T PRK09874 168 SYGLRPVFFITASVLFLCFLVTLF-------------------------------------------------------- 191 (408)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------------
Confidence 666766655444332221111000
Q ss_pred hhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHH-HHhhh
Q 009130 264 LASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIA-TLCGM 342 (543)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~-~~~~~ 342 (543)
..++++++.+ + +++ .......+.+++++++...+. .+...
T Consensus 192 -------~~~~~~~~~~------------------~-----------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (408)
T PRK09874 192 -------CIRENFQPVS------------------K-----------KEM---LHMREVVTSLKNPKLVLSLFVTTLIIQ 232 (408)
T ss_pred -------HhccCccccc------------------c-----------hhh---hHHHHHHHhCcCCchHHHHHHHHHHHH
Confidence 0011100000 0 000 000112345667766543322 22222
Q ss_pred chhhhhhhchHHHHHhhCCCchh----hHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh
Q 009130 343 GSGIATMNNIAQVGESLHYSTTE----INSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA 418 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~g~s~~~----a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~ 418 (543)
........+.+.+..+.+.+..+ .+.+.++.+++..++++..|+++||+++| +.+..+.+...++.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~------~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 233 VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE------KILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------hhHHHHHHHHHHHHHHHH
Confidence 22223344566666665333222 34555677788889999999999999654 455556555555554444
Q ss_pred -hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccccc
Q 009130 419 -SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGT 497 (543)
Q Consensus 419 -~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~ 497 (543)
.++....++..++.|++.+...+...+.+.+..+++++|+.+|+.+....+|. .++|.+.|.+.|..|
T Consensus 307 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~~gp~~~G~l~~~~g---------- 375 (408)
T PRK09874 307 FVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN-VTGPLMGAAISANYG---------- 375 (408)
T ss_pred HhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHH-HhhHHHHHHHHhhcc----------
Confidence 34445556667788999888888888888888999999999999988888888 489999999998876
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Q 009130 498 HCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 498 ~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
|+..|++.+++.+++.++.+..
T Consensus 376 --~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 376 --FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888877665443
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.95 E-value=5.4e-25 Score=226.32 Aligned_cols=360 Identities=12% Similarity=0.077 Sum_probs=241.0
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
....+.+.|.+++++|+++.+.+++.+.+.+++. .+++.|++.||+| ||+++..+.++++++.+
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G---------------~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLS---------------YKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHHHHHH
Confidence 3556778899999999999999977777777776 7889999999999 99999999999999998
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCC-CCcchhHHHHHhhhhhHHHHHHHHHHhcC-C-
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGH-YSGTIVGILKGFVGLSGAVLTQVYKTVCN-G- 184 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~-~- 184 (543)
++.. +..+++ ++.+++.|+++|+|.|...+.....+.++.|+ +|...+++.+..+++|..+++.++..+.. .
T Consensus 107 l~~~--~~~a~~---~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 107 LFWP--AAEIMN---YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHH--HHhcCC---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7321 234555 89999999999999999999999999988775 45568999999999999999888765431 0
Q ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccc
Q 009130 185 ----------------NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTF 248 (543)
Q Consensus 185 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (543)
..|++.+.. +++..+..+.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~--------------------------~w~~~f~~~~------------------- 216 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVL--------------------------SVQTPYMIIV------------------- 216 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHH--------------------------HHHHHHHHHH-------------------
Confidence 011111100 0000000000
Q ss_pred hhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcc
Q 009130 249 SLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCT 328 (543)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (543)
.+..++..+.. .++.|+.++ ++.++ ++ ..+...+.++++++
T Consensus 217 ---------~v~~~~~~~~~---~~~~p~~~~----------------~~~~~--------~~---~~~~~~~~~~ll~~ 257 (438)
T PRK10133 217 ---------AIVLLVALLIM---LTKFPALQS----------------DNHSD--------AK---QGSFSASLSRLARI 257 (438)
T ss_pred ---------HHHHHHHHHHH---HhcCCCCCc----------------ccccc--------cc---ccchhhhHHHHHhC
Confidence 00000110100 111111000 00000 00 00111234577889
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHH-H-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVG-E-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
|.++...+..++..........+.+.++ + ..|+++.+++..+..+.++.++|+++.|++.||+++| +++..+
T Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~------~~l~~~ 331 (438)
T PRK10133 258 RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH------KVLAAY 331 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHH
Confidence 9988777666666666565666777664 4 4699999999999999999999999999999999654 455555
Q ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 407 LVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 407 ~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
.++.++.+++....+.........+.|++.+..+|...+...+.+|+ +.+++.++..+ ..+|+. ++|.+.|.+.|..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~-~~~~i~G~l~~~~ 408 (438)
T PRK10133 332 ALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGG-IVTPVMGFVSDAA 408 (438)
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-Hhccch-HHHHHHHHHHHhc
Confidence 55554444433322222334556788999999999999999998874 56777777764 335553 6677999999876
Q ss_pred cCCCCccccccchhHHHHHHHHHHHH
Q 009130 487 ASGEDHTCYGTHCFMLSFMIMAFVAF 512 (543)
Q Consensus 487 g~~~~~~~~~~~~~~~~f~~~~~~~~ 512 (543)
|+ .+.+|++...+.+
T Consensus 409 g~-----------~~~~~~v~~~~~~ 423 (438)
T PRK10133 409 GN-----------IPTAELIPALCFA 423 (438)
T ss_pred cc-----------hHHHHHHHHHHHH
Confidence 51 5677765544333
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=1e-24 Score=222.35 Aligned_cols=375 Identities=11% Similarity=0.020 Sum_probs=244.1
Q ss_pred HcCCcccc-ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHH
Q 009130 25 SVGTTYTF-SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILC 102 (543)
Q Consensus 25 ~~g~~~~~-~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~ 102 (543)
.+|..+.. +++.|.+++++|+++.|.+++.+...+++. .+++.|++.||+| +|+++.++.+++
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G---------------~r~~~~~g~~l~ 78 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLS---------------YKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------chHHHHHHHHHH
Confidence 34554444 578899999999999999988777777776 7889999999999 999999999999
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHh
Q 009130 103 FTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTV 181 (543)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 181 (543)
+++.+++.. ....++ ++.+++.|++.|+|.|...+.....+.++.| ++|++.+++....+++|..+++.+...+
T Consensus 79 ~~g~~l~~~--~~~~~~---~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 79 ALGAFLFWP--AAEIMN---YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHH--HHhhcc---HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888432 122233 8899999999999999999999999999998 5799999999999999999999888776
Q ss_pred cCCCchh-HHHHHHHHHHHHHHHHHhheeccCCC-----CcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHH
Q 009130 182 CNGNPST-YILVLALLPTLVSLLFMSHVRIYGTN-----SVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARII 255 (543)
Q Consensus 182 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (543)
....... ..... ....+.. ..+..+++..+..++.
T Consensus 154 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~w~~~fl~~a~------------------------- 194 (410)
T TIGR00885 154 ILSNLPHQSQDVL--------------DKLSPEELSAIKHSDLASVQTPYMIIGA------------------------- 194 (410)
T ss_pred HhcCCccchhhhh--------------hhcCHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 4211000 00000 0000000 0000111111111111
Q ss_pred HHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHH
Q 009130 256 TFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLC 335 (543)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 335 (543)
..++..... ...+.|+. + + +++ ++. +...+.++.+|+|.++...
T Consensus 195 ----~~~~~~~~~--~~~~~p~~-~---~---------------~~~-------~~~----~~~~~~~~~~~~~~~~~~~ 238 (410)
T TIGR00885 195 ----VVLAVALLI--MLTKMPAL-N---H---------------SDA-------KQI----SFSASLSRLARIRHYREGV 238 (410)
T ss_pred ----HHHHHHHHH--HHhcCCCC-C---c---------------ccc-------ccc----cchhhHHHHHhChhHHHHH
Confidence 000100000 00111110 0 0 000 000 0011234677889998888
Q ss_pred HHHHhhhchhhhhhhchHHHHHhh--CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 336 IATLCGMGSGIATMNNIAQVGESL--HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
+..++..+.......+++.+.++. +.+...++...+.+.....+||++++++.||+++| +.+.+..+..++.
T Consensus 239 l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~------~~l~i~~~~~~~~ 312 (410)
T TIGR00885 239 IAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH------KVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHH
Confidence 888887777767777888888765 44445556667777788899999999999999543 4565666666666
Q ss_pred HHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcc
Q 009130 414 HIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHT 493 (543)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~ 493 (543)
+++....+.....+..++.|++.+..+|...+...+..+++....+.++.... +|+. +.|++.|.+.|..+...
T Consensus 313 ~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga-~~p~l~G~~~d~~~~~~--- 386 (410)
T TIGR00885 313 CLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGG-IVPPLQGFIIDMKEIAA--- 386 (410)
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccc-hHHHHHHHHHHHhcccc---
Confidence 55554433334456677889999999999999999999866654455544433 7774 77889999999652100
Q ss_pred ccccchhHHHHHHHHH
Q 009130 494 CYGTHCFMLSFMIMAF 509 (543)
Q Consensus 494 ~~~~~~~~~~f~~~~~ 509 (543)
..+++.+|++-..
T Consensus 387 ---~~~~~~~~~~~~~ 399 (410)
T TIGR00885 387 ---APAVNTSFILPLL 399 (410)
T ss_pred ---cCccchHHHHHHH
Confidence 0027777776544
No 56
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.6e-24 Score=202.40 Aligned_cols=354 Identities=12% Similarity=0.046 Sum_probs=269.0
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
..+.+++.+++.+|+|.|.++.+.+++.-.+... ++++..++..|+| .++.+..++++.++|..
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g---------------~er~l~~~Llli~~G~~ 92 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFG---------------EERSLFLALLLIAAGIL 92 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---------------hHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999988887777664 8999999999999 99999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC-c
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN-P 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~-~ 186 (543)
+ -... + .+.++..-.+.|.|.+..+...+..+.++||+|-+..+|++....++|+++++.+.-.+.+.. +
T Consensus 93 i-----R~~~-~---~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~g 163 (395)
T COG2807 93 I-----RSLG-G---LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGG 163 (395)
T ss_pred H-----Hhcc-c---HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhcc
Confidence 9 6654 3 688888999999999999999999999999999999999999999999999987766554433 4
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|+.-+..=.+|..++++..
T Consensus 164 W~~aL~~WAl~allAl~~W------------------------------------------------------------- 182 (395)
T COG2807 164 WRGALGFWALLALLALLIW------------------------------------------------------------- 182 (395)
T ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 5544433333332221110
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
. ++. .++.. .+ .+.+..+..+++|+|.-|.+.+.+.+.+..+|
T Consensus 183 -l-----Pq~-~r~~~---------------------------~~---~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y 225 (395)
T COG2807 183 -L-----PQA-LREQA---------------------------AS---IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYY 225 (395)
T ss_pred -h-----hhc-ccccc---------------------------cc---cccccccccccccCchhHHHHHHHHhhHHHHH
Confidence 0 000 00000 00 00011122567899999999999999999999
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLF 426 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~ 426 (543)
..+.|+|.++.|.|+|.++++.+.++..+.+....+....+.+|.. ++++......+++.++.+.+...+....+
T Consensus 226 ~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~-----n~r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 226 IVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSK-----NQRPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999853 44566666777777776655432222222
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCC-cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGV-RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
...++.|++.|+.++..-..+.+...+ ++.+.-.|+..-.+.+-.. +||++.|++.|.+|+ |+..++
T Consensus 301 lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa-~GP~l~G~lhDa~gs-----------w~~~~~ 368 (395)
T COG2807 301 LWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA-FGPWLFGFLHDATGS-----------WSAPLV 368 (395)
T ss_pred HHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh-hhhhhHhHHHHhcCC-----------hHHHHH
Confidence 236899999999999888887777654 4445666666666665553 789999999999994 999988
Q ss_pred HHHHHHHHHHHHHHHH
Q 009130 506 IMAFVAFFGSLVAFLL 521 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~ 521 (543)
..+...++..+..+..
T Consensus 369 ~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 369 LLALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 8877666666554443
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=1.3e-24 Score=219.94 Aligned_cols=348 Identities=11% Similarity=0.026 Sum_probs=237.3
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHH-HHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFT-GAILCFTGYFLVW 110 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~-g~~~~~~g~~~~~ 110 (543)
+.+.+.+++++|.|+.+.+++.+...+.. ..+++.|.+.||+| ||+.++. +.++..++.++
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g---------------~r~~~~~~~~~~~~~~~~~-- 80 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQG---------------DRKGLILFCCLLAALACLL-- 80 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------------CchHHHHHHHHHHHHHHHH--
Confidence 44445678999999999997766665544 47889999999998 8877554 55555566666
Q ss_pred HHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCC-CCcch--hHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 111 ASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGH-YSGTI--VGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~-~rg~~--~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++.+++ ++.+++.|++.|.+.+...+.......++.|+ +|+.+ .++...+.++|.++++++++.+.+..+|
T Consensus 81 ---~~~~~~---~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~ 154 (375)
T TIGR00899 81 ---FAWNRN---YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF 154 (375)
T ss_pred ---HHhcch---HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc
Confidence 556665 78888889999888777777777777888873 45543 5788888899999999999988877778
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.++...+..++..+...+.
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~~----------------------------------------------------------- 175 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWLF----------------------------------------------------------- 175 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----------------------------------------------------------
Confidence 877776655433322111110
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
.++++++++ ++ +. ..+.++.++++.++...+..++.......
T Consensus 176 ----~~~~~~~~~-------------------~~---------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (375)
T TIGR00899 176 ----LPSYPRGAP-------------------GA---------LT------RLEVRGLLASRDTRLLFVACTLMWGCNIL 217 (375)
T ss_pred ----CCCcccCcc-------------------cc---------cC------cchhhhhhcCcchHHHHHHHHHHHHHHHH
Confidence 011100000 00 00 00112345666666655554444433334
Q ss_pred hhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 348 TMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 348 ~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
...+.|.+.+ +.|.++.+.+...+...+...+++++.|++.||+++| +.+.++.+...+.+..+. .++.+..
T Consensus 218 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR------RLMLLAALAGVAFYTGLAADNSLWAL 291 (375)
T ss_pred HHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677764 5799999999888888888888999999999999654 444445444444433333 2334444
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+...+....++.|..|+ +++++.|+.+....+|. .++|.+.|.+.|..| |+..|+
T Consensus 292 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~~g~~~~g~~~~~~g------------~~~~~~ 357 (375)
T TIGR00899 292 LMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGW-IIAGSVGGILAERWS------------YHAVYW 357 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcc------------chhHHH
Confidence 5556677888887777777888888875 56799999988888888 489999999999876 899999
Q ss_pred HHHHHHHHHHHHHHH
Q 009130 506 IMAFVAFFGSLVAFL 520 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~ 520 (543)
+.+++.+++.++..+
T Consensus 358 ~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 358 FAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHhe
Confidence 888877777766443
No 58
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.94 E-value=7e-25 Score=202.90 Aligned_cols=243 Identities=46% Similarity=0.800 Sum_probs=220.7
Q ss_pred hHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCc
Q 009130 12 KWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGP 91 (543)
Q Consensus 12 ~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~ 91 (543)
||..++++.+++++.|+.|.|+.+.|++++.+|+|++|.+.++.+..+|..++++.|.+.|++| +
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~g---------------p 65 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFG---------------P 65 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcc---------------h
Confidence 7999999999999999999999999999999999999999999999999989999999999999 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhH
Q 009130 92 WVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSG 171 (543)
Q Consensus 92 r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~ 171 (543)
|.++.+|.+...+|+.+.++...+..+++ ++|+++++.++.|.|.+..++.+.....++||++||++.|+..+..++++
T Consensus 66 ~~~l~iG~~~~~~GY~~~~l~~~~~i~~~-~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSa 144 (250)
T PF06813_consen 66 WVVLLIGAVLGFVGYGLLWLAVSGRIPSL-PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSA 144 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccCcc-chHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHH
Confidence 99999999999999999999888876644 58999999999999999888888888899999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCC-----CcccchhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 009130 172 AVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTN-----SVDDKKHLNAFSAVAMTLAAYFMVITVMENLL 246 (543)
Q Consensus 172 ~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (543)
++...+...++.++...+.++++..|..++++.++++++.|.+ ++++++.+..+..+.+.++.|++..++.++..
T Consensus 145 ai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~ 224 (250)
T PF06813_consen 145 AIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFV 224 (250)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999988642 23445566677888888999999999999999
Q ss_pred cchhhHHHHHHHHHHHHhhccccc
Q 009130 247 TFSLWARIITFIILLLLLASPLRV 270 (543)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~ 270 (543)
+.+++.+.....++++++..|+.+
T Consensus 225 ~~s~~~~~~~~~il~llL~~Pl~i 248 (250)
T PF06813_consen 225 KLSRAARVIFAVILLLLLLLPLAI 248 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhc
Confidence 999999988888877777777653
No 59
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=2.1e-24 Score=225.14 Aligned_cols=363 Identities=10% Similarity=0.007 Sum_probs=241.6
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHH-HHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVV-HFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~-~~~g~~~~~~g~~~~~ 110 (543)
.+...|...++.|.+.++++.++.... .....+++|++.||+. .+|+|||+. +..+.++.+++..+
T Consensus 31 ~~~~l~~~l~~~g~~~~~ig~~~~~~~-~~~~~~l~gpl~Dr~~----------~~~~Grrr~~ll~~~i~~~~~~~~-- 97 (491)
T PRK11010 31 TSGTLQAWMTVENIDLKTIGFFSLVGQ-AYVFKFLWSPLMDRYT----------PPFLGRRRGWLLATQLLLLVAIAA-- 97 (491)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHccc----------ccCCCCchHHHHHHHHHHHHHHHH--
Confidence 444567778888999999996533322 2357889999999994 223337764 66777777777766
Q ss_pred HHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC-CCchh
Q 009130 111 ASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN-GNPST 188 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~-~~~~~ 188 (543)
.++.....+++.+.+.+++.|++.+...++..++..||+| +||+++.++...+..+|.++++.+...+.+ ..+|+
T Consensus 98 ---~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr 174 (491)
T PRK11010 98 ---MGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQ 174 (491)
T ss_pred ---HHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHH
Confidence 3333211137788889999999999988988899999998 789999999999999999999998888876 35787
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
..+....+...+..+...+
T Consensus 175 ~~f~i~a~l~ll~~l~~~~------------------------------------------------------------- 193 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLL------------------------------------------------------------- 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHh-------------------------------------------------------------
Confidence 7776554433222111111
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
.++++ +++ + .+ + +. ++....+.++.++++.+|...+..++........
T Consensus 194 ---~~e~~-~~~---~--------------~~--~-------~~--~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~ 241 (491)
T PRK11010 194 ---APEPT-DTI---P--------------VP--K-------TL--EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFA 241 (491)
T ss_pred ---cCCCc-ccc---c--------------cc--c-------ch--hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH
Confidence 11110 000 0 00 0 00 0001123456777777776665554444333344
Q ss_pred hhchHHHH-HhhCCCchhhHHHHH-HHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH---HHhhc--C
Q 009130 349 MNNIAQVG-ESLHYSTTEINSLIS-LWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHI---AIASG--F 421 (543)
Q Consensus 349 ~~~~~~~~-~~~g~s~~~a~~~~~-~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~---~~~~~--~ 421 (543)
..+.++++ ++.|+|+++.+.... ...++.++|.+++|+++||+++| +.+.++.++..+..+ .+... +
T Consensus 242 ~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~------~~l~i~~~l~~l~~l~~~~l~~~~~~ 315 (491)
T PRK11010 242 MSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF------RALMIFGILQGVSNAGYWLLSITDKN 315 (491)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45566665 457999999999875 55679999999999999999754 333333333333222 22222 2
Q ss_pred cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhH
Q 009130 422 PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFM 501 (543)
Q Consensus 422 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~ 501 (543)
...+....++..++.|...+...++..+..+++..++.+|+.+....+|.. +.+.+.|.+.|..| |+
T Consensus 316 ~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~-~~~~~~G~l~~~~G------------~~ 382 (491)
T PRK11010 316 LYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRV-YVGPVAGWFVEAHG------------WP 382 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhC------------hH
Confidence 222233344444445555556677888899988999999999988899985 55668999999887 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 009130 502 LSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~~ 522 (543)
..|.+.+++.+.+.++...++
T Consensus 383 ~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 383 TFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888877766654
No 60
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=6.2e-24 Score=217.29 Aligned_cols=333 Identities=11% Similarity=-0.048 Sum_probs=223.8
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
...+....|.+.++++.+.++.++..+.+.+++. .+++.|++.||+| ||+++..+.++++++.+
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G---------------rr~~l~~~~~~~~~~~~ 96 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIG---------------RRPVLITGALIFTLACA 96 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcC---------------chHHHHHHHHHHHHHHH
Confidence 3455666788999999999999966666666665 7889999999999 99999999999999998
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
+ +..+++ ++.+++.|+++|++.+...+....++.|++| ++|++++++...+..+|..+++.+++.+.+..+
T Consensus 97 ~-----~~~a~~---~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g 168 (413)
T PRK15403 97 A-----TLFTTS---MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH 168 (413)
T ss_pred H-----HHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8 777776 7899999999999998766767778899998 578999999999999999999999888876667
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|++.+....+..++.++...+
T Consensus 169 w~~~f~~~~~~~~i~~~~~~~----------------------------------------------------------- 189 (413)
T PRK15403 169 WKVLFAIIAVMGLIAFVGLLL----------------------------------------------------------- 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------------------------------------------------
Confidence 888776655543332211110
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
..++++++ + + . +. ..+.....+++.+|||.+|...+..++.....+
T Consensus 190 ----~lp~~~~~-~----------------~-~-----------~~-~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 235 (413)
T PRK15403 190 ----AMPETVKR-G----------------A-V-----------PF-SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMM 235 (413)
T ss_pred ----hCCCCccc-c----------------C-C-----------CC-ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 00010000 0 0 0 00 001112345678899999998888777766666
Q ss_pred hhhhchHHHHHhh-CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-----hc
Q 009130 347 ATMNNIAQVGESL-HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-----SG 420 (543)
Q Consensus 347 ~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-----~~ 420 (543)
.+....|.++++. |+++.+.++.......+..++..+.+.+.++..+ ++. .........++..++. ..
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~-----~~~-~~~~~~~~~ig~~l~~~~~~~~~ 309 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE-----PRF-IWRAVPIQLVGLALLIVGNLLWP 309 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-----hhH-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 7777788888775 9999999998877777777777766665433221 111 1111111122211111 12
Q ss_pred Ccc-hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Q 009130 421 FPG-NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 421 ~~~-~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~ 485 (543)
+.. ..++..++.++|.+...+......-.. ....+|++.++.+.....+.. .++...+++.+.
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~-~~~~~~g~~~~~ 373 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMA-VSVEIGRWLWFN 373 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHc
Confidence 222 235566677777777666555322211 122468888888777666653 566677777665
No 61
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.94 E-value=1.7e-24 Score=216.54 Aligned_cols=330 Identities=16% Similarity=0.183 Sum_probs=267.8
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.+..+...|.+.+++|.++.+.+++.+...++.. ..++.|++.||+| ||+.+..+.++..++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g---------------~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFG---------------RRRVLLLGLLLFALGSL 79 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC---------------CchhhHHHHHHHHHHHH
Confidence 3456677788999999999999977777777665 7889999999999 99999999999999998
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
+ ....++ ++.+++.|++.|++.+...+....++.|++| ++|++++++.....++|..+++.+.+.+.+...
T Consensus 80 ~-----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 151 (352)
T cd06174 80 L-----LAFASS---LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG 151 (352)
T ss_pred H-----HHHhcc---HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8 555555 7889999999999999999999999999998 589999999999999999999999888876555
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhc
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLAS 266 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (543)
|++.+....+..++..+...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------- 172 (352)
T cd06174 152 WRWLFLILAILGLLLALLLLF----------------------------------------------------------- 172 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------------------------------------------------
Confidence 666555444332221110000
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 267 PLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
. . |.++...+..++......
T Consensus 173 -----------------------------------------------------~--~-----~~~~~~~~~~~~~~~~~~ 192 (352)
T cd06174 173 -----------------------------------------------------L--L-----RLLLLLALAFFLLSFGYY 192 (352)
T ss_pred -----------------------------------------------------H--H-----HHHHHHHHHHHHHHhHHH
Confidence 0 0 556667776666666667
Q ss_pred hhhhchHHHHHhh-CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH-HHHHHHHHHHHHHHHHh-hcCcc
Q 009130 347 ATMNNIAQVGESL-HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI-FMVITLVAMSIGHIAIA-SGFPG 423 (543)
Q Consensus 347 ~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~-~~~~~~~~~~i~~~~~~-~~~~~ 423 (543)
....+.|.+.++. |.++.+.+...+...++..+++++.+++.||+++| + .+..+.++..++.+.+. ..+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~ 266 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR------RLLLLIGLLLAALGLLLLALAPSLA 266 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHHHHHHHhccHH
Confidence 7778888888776 99999999999999999999999999999999654 4 66677777777766665 34455
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
..++..++.|++.+...+....++.|..|++++++..|+.+....++.. ++|.+.|.+.|..+ |+..
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~i~g~l~~~~~------------~~~~ 333 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA-LGPLLAGLLLDTGG------------YGGV 333 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccC------------cchH
Confidence 5677788889999999999999999999999999999999999999984 88899999998766 8899
Q ss_pred HHHHHHHHHHHHHHHH
Q 009130 504 FMIMAFVAFFGSLVAF 519 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~ 519 (543)
+++.+++.+++.++.+
T Consensus 334 ~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 334 FLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 9998888887776543
No 62
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.94 E-value=5.2e-26 Score=227.97 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=233.8
Q ss_pred cccccH-HHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSS-TLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 32 ~~~~~~-~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
.....| .+.+++|.++.+.+++.+...++.. .+++.|.+.||+| ||+++.++.++.+++.++
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~l~~~~~~~~~~~~~- 78 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFG---------------RRRVLIIGLLLFALGSLL- 78 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS----------------HHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------------CeeeEeehhhhhhhHHHH-
Confidence 455556 8899999999999987777777665 7889999999999 999999999999999555
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
..++++ ++.+++.|++.|++.+...+....++.|++| ++|++++++...+.++|.++++.+++.+.+..+|+
T Consensus 79 ----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~ 151 (352)
T PF07690_consen 79 ----LAFASN---FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWR 151 (352)
T ss_dssp ----HHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHC
T ss_pred ----hhhhhh---HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccc
Confidence 333354 6788999999999999999999999999998 58999999999999999999999999888666777
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+.+....+..++..+.....
T Consensus 152 ~~~~~~~~~~~~~~il~~~~------------------------------------------------------------ 171 (352)
T PF07690_consen 152 WAFLISAILSLIAAILFILF------------------------------------------------------------ 171 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHCC------------------------------------------------------------
T ss_pred cccccccchhhhhhhhHhhh------------------------------------------------------------
Confidence 77666555444432211110
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
.++++++++ + +++++++ ++.+++.....++.++++.+|...+..+.........
T Consensus 172 ---~~~~~~~~~---~-------------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T PF07690_consen 172 ---LPEPPPPRE---R-------------ESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGF 225 (352)
T ss_dssp ---C---STTTT------------------SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ---hhhcccccc---c-------------ccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHh
Confidence 001111100 0 0000000 0000010012345566676764444444444455557
Q ss_pred hhchHHH-HHhhCCC-chhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCc
Q 009130 349 MNNIAQV-GESLHYS-TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----SGFP 422 (543)
Q Consensus 349 ~~~~~~~-~~~~g~s-~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----~~~~ 422 (543)
..+.|.+ .++.|++ ..+.+...++..+...+++++.|+++||++++ ...........+....+. ..+.
T Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 226 SFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR------RRLLIAILLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHHCCSHHHCHH
T ss_pred hcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH------HHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 7788887 4667999 78999999999999999999999999998653 233333333333333322 2234
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
...++..++.|++.+...+....++.|..|++++|++.|+.+....++.. ++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI-IGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 55666777889999999999999999999999999999999999999884 665
No 63
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.9e-25 Score=224.51 Aligned_cols=336 Identities=14% Similarity=0.046 Sum_probs=228.6
Q ss_pred HHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccC
Q 009130 39 LKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLL 117 (543)
Q Consensus 39 l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~ 117 (543)
+.+|.+....|++.+.+.+.++++ +.+|+|.+.||++ ..+.+....+.+++-.++ +...
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~---------------ls~~l~~~~~~w~~~~~~-----~~~~ 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP---------------LSKGLSVSGILWGLFGFL-----TAAV 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC---------------hHHHHHHHHHHHHHHHHH-----HHHH
Confidence 558999999999999888898987 7889999999997 777777777776666655 4445
Q ss_pred CCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhc------CCCchhHH
Q 009130 118 PRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVC------NGNPSTYI 190 (543)
Q Consensus 118 ~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~------~~~~~~~~ 190 (543)
+| ++.+++.|++.|+.++..+|+...+++.||. ++||+.+|+..+..++|+++++.++..+. ...+|+|.
T Consensus 132 ~s---~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~ 208 (495)
T KOG2533|consen 132 HS---FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWL 208 (495)
T ss_pred hh---hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceee
Confidence 65 8999999999999999999999999999997 68999999999999999999999999974 34678888
Q ss_pred HHHHHH-HHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccc
Q 009130 191 LVLALL-PTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLR 269 (543)
Q Consensus 191 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (543)
|++.++ ....+++..++++..|++. +
T Consensus 209 FiI~G~i~~~~gi~~f~~lp~~P~~~----~------------------------------------------------- 235 (495)
T KOG2533|consen 209 FIIEGVITLVLGIVVFFFLPDNPSKA----W------------------------------------------------- 235 (495)
T ss_pred hhHHHHHHHHHHheEEEEecCChhhc----c-------------------------------------------------
Confidence 877554 3333344444444333210 0
Q ss_pred cccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhh
Q 009130 270 VAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATM 349 (543)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~ 349 (543)
+..+.|+.. ..++.+++ ..+...++.+....++++++|..|.++++.++.....+.+.
T Consensus 236 --fl~~~ek~~------------~~~~~~~~--------~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~ 293 (495)
T KOG2533|consen 236 --FLTDEEKEL------------VVERLRES--------PSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS 293 (495)
T ss_pred --ccchHHHHH------------HHHHHHhc--------cCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH
Confidence 000000000 00000000 00000011344667899999999999999999999999999
Q ss_pred hchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH-HHHHHHHHHHHh-hcCcchHH
Q 009130 350 NNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT-LVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 350 ~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~-~~~~~i~~~~~~-~~~~~~~~ 426 (543)
+|+|.++++ .|+|..++..+..++.++++++.+++|+++||+..- ..++...... .+...++...+. ........
T Consensus 294 ~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~--~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~ 371 (495)
T KOG2533|consen 294 YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTI--FARRLLFIVFLCLYAIIGAISLLAAAVLPGAY 371 (495)
T ss_pred HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHHHHHhhccchHHh
Confidence 999999998 579999999999999999999999999999995300 0222333333 344445544444 32233344
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcch-hhHHHHHHhhhhhhhhhh
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHM-GTIFNTISIACPVGSYIC 474 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~~ig~~i~ 474 (543)
.+......+.+...+.....+.+....+.+ -+..+....+.+.++.+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~ 420 (495)
T KOG2533|consen 372 GAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAIS 420 (495)
T ss_pred HHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhh
Confidence 434444444444455555555555544433 344444455555555433
No 64
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.93 E-value=2.3e-24 Score=221.54 Aligned_cols=367 Identities=13% Similarity=0.033 Sum_probs=227.6
Q ss_pred ccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
..+.+..++++++|+++.+.+++.+.+.+... .+++.|++.||+| ||+++.++..+++++...+
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g---------------~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLG---------------LKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------chHHHHHHHHHHHHHHHHH
Confidence 35666678888899999999977666666665 7899999999999 9999988776665554321
Q ss_pred HHH-HhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 110 WAS-VVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 110 ~~~-~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
... ........ .....+..+++.|.+.....+.... ..+.+++++|+++|......++|.++++++++.+.+. .|+
T Consensus 94 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYN-ILLGAIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQ 170 (420)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-Cch
Confidence 110 00000000 0111222344444333332222222 2233456788899999999999999999998877643 444
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+.++...+..++..+...+.
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~------------------------------------------------------------ 190 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFA------------------------------------------------------------ 190 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcc------------------------------------------------------------
Confidence 44444333322221111111
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
++++++.+ +. . ++++ +++ ++......++.+|+|.+|.+.+..+.........
T Consensus 191 ----~~~~~~~~---~~---------~-----~~~~-----~~~--~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 191 ----KPDAPSTA---KV---------A-----NALG-----ANA--SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred ----cccccchh---hh---------c-----cchh-----ccc--ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHH
Confidence 11110000 00 0 0000 000 0011123456788888877665444443333334
Q ss_pred hhchHHHHHh----hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcc
Q 009130 349 MNNIAQVGES----LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPG 423 (543)
Q Consensus 349 ~~~~~~~~~~----~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~ 423 (543)
..+.|.+..+ .+.+..+.+.+.++..+...++.+++|+++||+++| +.+..+.++..++.+++. .++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~------~~~~~~~~l~~~~~~l~~~~~~~~ 316 (420)
T PRK09528 243 DQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK------NALLLAGTIMAVRIIGSGFATGPL 316 (420)
T ss_pred HHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc------hhhHHHHHHHHHHHHHHHhcccHH
Confidence 4455666543 356667788889999999999999999999999754 455556666666655554 44555
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHH-HHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNT-ISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
.++...++.|++.+...+....++.|.+|++.+++.++. .++...+|. +++|.+.|++.|..| |+.
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~-~ig~~~~G~l~~~~G------------~~~ 383 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA-VFLSTLAGNLYDSIG------------FQG 383 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH-HHHHHHHHHHHHhhC------------chH
Confidence 566666777777776666666788899999999988776 567777888 488899999999887 999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 009130 503 SFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~ 522 (543)
.|.+.+++.++..++.+...
T Consensus 384 ~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 384 TYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99988887777666555443
No 65
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.3e-23 Score=213.00 Aligned_cols=343 Identities=9% Similarity=-0.057 Sum_probs=246.0
Q ss_pred cccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchH----HHHHHHHHHHHHHHH
Q 009130 34 IYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWV----VHFTGAILCFTGYFL 108 (543)
Q Consensus 34 ~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~----~~~~g~~~~~~g~~~ 108 (543)
++.|.+.+|+|.|..|++++.+...+.. ..+++.|++.||+| ||+ .+.++.+++.+. .
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~---------------~~~~~~~~~~~~~~l~~~~--~ 87 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDAN---------------HIIIALRLLALASAIFAAA--F 87 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------cHHHHHHHHHHHHHHHHHH--H
Confidence 4556788899999999996655555554 47889999999997 533 333333222221 1
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
+..+++ ++.+++.|+++|.+.+...+...++. ++++++|+++.|....+.++|.+++|++++.+.+..+|+
T Consensus 88 -----~~~~~~---~~~l~~~~~l~~~~~~~~~p~~~al~-~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~ 158 (382)
T TIGR00902 88 -----SAGAHN---AWLLFIAIGLFALFFSAGMPIGDALA-NTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQ 158 (382)
T ss_pred -----HHhhhh---HHHHHHHHHHHHHHHccchhHHHHHH-HHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChh
Confidence 334454 78999999999988888777766665 455678999999999999999999999999988776777
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+.+..........++ ..
T Consensus 159 ~~f~~~~~~~~~~~~-~~-------------------------------------------------------------- 175 (382)
T TIGR00902 159 NILAILTAGLAFMLI-GF-------------------------------------------------------------- 175 (382)
T ss_pred HHHHHHHHHHHHHHH-HH--------------------------------------------------------------
Confidence 655432211110000 00
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
..++++++++ + +++ ++. ......++.+|+|++|...+..++.......+
T Consensus 176 --~~~~~~~~~~------------------~-~~~------~~~----~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 176 --LIKPTIPPKD------------------A-IPE------DES----QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred --HcCCCCCCCc------------------c-ccc------ccc----ccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 0011100000 0 000 000 01123567889999999988888777777777
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHH
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFV 427 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 427 (543)
..+.|.+.++.|.++.+.+.+.++..++.+++.++.+++.||++.| ..+.++.+...+...++. .++.+.++.
T Consensus 225 ~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 225 YGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR------DLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH------HHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 8888999999999999999999999999999999999999998544 677788888888777666 455566777
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHH-hhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIS-IACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
..++-|++++...+....++.+. |++++++.+++.+ +...+|. .++|.+.|++.|..| + ..|++
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~-~~g~~~~G~l~~~~g------------~-~~~~~ 363 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLI-AIFTAFAGFIYPTLG------------A-GTFVF 363 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcc------------H-HHHHH
Confidence 78899999999888888888887 8889999999986 4567777 488999999999886 5 56777
Q ss_pred HHHHHHHHHHH
Q 009130 507 MAFVAFFGSLV 517 (543)
Q Consensus 507 ~~~~~~~~~i~ 517 (543)
.+++.+++.++
T Consensus 364 ~~~~~~~~~~~ 374 (382)
T TIGR00902 364 MAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHH
Confidence 77766655433
No 66
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.8e-24 Score=219.96 Aligned_cols=347 Identities=11% Similarity=0.028 Sum_probs=236.8
Q ss_pred ccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
..+.+.+++++++|++..+.+++.+...+... .+++.|++.||+| +|+++.++.++.+++.++
T Consensus 26 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g---------------~k~~~~~~~~~~~~~~~~- 89 (395)
T PRK10054 26 TLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFD---------------KKRYMLLAITAFASGFIA- 89 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------------cchhHHHHHHHHHHHHHH-
Confidence 35566678889999999999977666555554 7889999999999 999999999988888877
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
.+++++ ++.+++.|.+.|.+.+...+.......|.+| ++|+++.|+.....++|.+++|++++.+.+ ..|+
T Consensus 90 ----~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~ 161 (395)
T PRK10054 90 ----IPLVNN---VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSIN 161 (395)
T ss_pred ----HHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccC
Confidence 555555 6777778888888777777777778889887 679999999999999999999999887753 3455
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
..+....+...+.++...+
T Consensus 162 ~~f~~~~~~~~i~~i~~~~------------------------------------------------------------- 180 (395)
T PRK10054 162 LPFWLAAICSAFPLVFIQI------------------------------------------------------------- 180 (395)
T ss_pred cHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 4444333222221110000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
..++++++++ + +++ +..+.++.+|+|.+|...+..++.......+
T Consensus 181 --~~~~~~~~~~------------------~----------~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 225 (395)
T PRK10054 181 --WVQRSEKAIA------------------T----------ETG-----SVWSPSVLLQDKALLWFTCSGFLASFVSGAF 225 (395)
T ss_pred --HHhccccccc------------------c----------chh-----hhhhhhhhccCceehHHHHHHHHHHHHHHHh
Confidence 0001100000 0 000 0012256788999988877766655544444
Q ss_pred hhchHHHHH---hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh--cCcc
Q 009130 349 MNNIAQVGE---SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS--GFPG 423 (543)
Q Consensus 349 ~~~~~~~~~---~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~--~~~~ 423 (543)
..+.+.+.. +.+.+....+...+...+.....++..|++.||.++ ++.+..+.++..++...+.. ++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~ 299 (395)
T PRK10054 226 ASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANI------RPLMTAGTLCFVIGLVGFIFSGNSLL 299 (395)
T ss_pred hhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCc------hhHHHHHHHHHHHHHHHHHHcchHHH
Confidence 455566553 335566666777777777777777777888888743 35566666666666655442 2333
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
.+.+..++.+++.+...+.....+.+..|++.+++.+|..+ ...+|. .++|.+.|.+.|..| +...
T Consensus 300 ~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~-~~Gp~~~G~l~~~~g------------~~~~ 365 (395)
T PRK10054 300 LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGA-AINPLVSGVILTTLP------------PWSL 365 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHH-HHHHHHHHHHHHHcC------------hhhH
Confidence 44556778888887777777788999999999999988765 455777 589999999999987 7777
Q ss_pred HHHHHHHHHHHHHH
Q 009130 504 FMIMAFVAFFGSLV 517 (543)
Q Consensus 504 f~~~~~~~~~~~i~ 517 (543)
|++.+....+..++
T Consensus 366 ~~~~~~~~~~~~~~ 379 (395)
T PRK10054 366 FVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 77665544444333
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=1.1e-23 Score=214.58 Aligned_cols=326 Identities=12% Similarity=0.092 Sum_probs=215.5
Q ss_pred ccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
.+....|.+.+++|.++.+.++..+.+.++.. .+++.|++.||+| ||+.+..+.++++++..+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g---------------~r~~l~~~~~~~~i~~~~- 84 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSG---------------RKPVAIPGAALFIIASLL- 84 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhC---------------ChHHHHHHHHHHHHHHHH-
Confidence 34467899999999999999977777777765 6789999999999 999999999999999888
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
...+++ ++.+++.|+++|++.+...+....++.+++| ++|+++.++......+|..++|.++..+.+..+|+
T Consensus 85 ----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~ 157 (392)
T PRK10473 85 ----CSLAET---SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQ 157 (392)
T ss_pred ----HHHhCc---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChH
Confidence 566665 7888889999999999988889999999998 68999999999999999999988887776666777
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+.+....+..++......+
T Consensus 158 ~~~~~~~~~~~i~~~~~~~------------------------------------------------------------- 176 (392)
T PRK10473 158 SLFYTMAAMGILVLLLSLF------------------------------------------------------------- 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 6655443322221111000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
..++++++++ + ++. ......++.++++.++...+...+.......+
T Consensus 177 --~~~~~~~~~~------------------~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (392)
T PRK10473 177 --ILKETRPARA------------------P----------AAS----SKPRENSESLLNRFFLSRLVITTLSVTVILTF 222 (392)
T ss_pred --HcCCCCCccc------------------C----------Ccc----chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 0011100000 0 000 00112345677888776555544443333344
Q ss_pred hhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHH
Q 009130 349 MNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLF 426 (543)
Q Consensus 349 ~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~ 426 (543)
..+.|.+.+ +.|+++.+.+...+..+++.++++++.+++.||+++| +.+..+.++..++.+++.. .+.....
T Consensus 223 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (392)
T PRK10473 223 VNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR------TLMLTSQVLFLAAGITLALSPSHAVSL 296 (392)
T ss_pred HHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566654 5699999999999999999999999999999999654 5566666665555554442 2222233
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcch-hhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHM-GTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
....+.+.+.+..++. ....+..|.+++ +.+.++..++..+|+ .+.+++.+..|
T Consensus 297 ~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~-----~~~~~l~~~~g 351 (392)
T PRK10473 297 FGITLICAGFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGS-----SLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHH-----HHHHHHHHHhc
Confidence 3333444444333322 223344444333 455555444444444 45666666665
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.93 E-value=1.3e-23 Score=213.03 Aligned_cols=325 Identities=9% Similarity=-0.055 Sum_probs=219.4
Q ss_pred ccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
.+....|.+.+++|+++.+.+++.+.+.++.. .+++.|.+.||+| ||+++..+.++.+++..+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g---------------~~~~~~~~~~~~~i~~~~- 72 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFG---------------RKPVILGGTLVFALAAVA- 72 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcC---------------ChHHHHHHHHHHHHHHHH-
Confidence 35567789999999999999977777777765 6889999999998 999999999999999988
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
+.++++ ++.+++.|+++|++.+...+.....+.+++| ++|++++++...+..+|..+++.+.+.+.+..+|+
T Consensus 73 ----~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 145 (377)
T PRK11102 73 ----CALAQT---IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWH 145 (377)
T ss_pred ----HHHHcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH
Confidence 555565 7888999999999999998989999999998 67999999999999999999999988887666676
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
+.+....+..++..+...+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 164 (377)
T PRK11102 146 AIFWVLALAAILAAALVFF------------------------------------------------------------- 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 6655443332221111000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
..++++++++ ++ +. +.++...+.++.++++.++...+..++.......+
T Consensus 165 --~~~~~~~~~~------------------~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T PRK11102 165 --FIPETLPKER------------------RQ----------PF-HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSF 213 (377)
T ss_pred --hCCccCcccc------------------cC----------CC-ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 0011100000 00 00 00011123456788888887777666555555555
Q ss_pred hhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH-HH--HHh-hc-Cc
Q 009130 349 MNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG-HI--AIA-SG-FP 422 (543)
Q Consensus 349 ~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~-~~--~~~-~~-~~ 422 (543)
..+.|.+..+ .|+++++.+...++..++..+++++.|++.||+++| +.+..+.++..+. .. ... .. +.
T Consensus 214 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL------NMLRFGLWIQFIMGIWLVVSALLDLGF 287 (377)
T ss_pred HHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH------HHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 6666766654 699999999999999999999999999999999654 4555554433222 21 121 11 12
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhh-hhhhhhhhhhh
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIAC-PVGSYICSVRI 478 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~ig~~i~~~~l 478 (543)
....+...+.+.+.+.........+.|..| ++++++.++.+... .++. ++++.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~-~~g~~~ 342 (377)
T PRK11102 288 WALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGA-IVGALL 342 (377)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHH-HHHHHH
Confidence 222223333333334334444455666665 78899998876543 3444 455543
No 69
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=5.4e-24 Score=216.37 Aligned_cols=349 Identities=11% Similarity=-0.043 Sum_probs=226.0
Q ss_pred cHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHh
Q 009130 36 SSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVV 114 (543)
Q Consensus 36 ~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~ 114 (543)
.+.+.+|++.++.+.+++.+.+.+.+. ++++.|.++||+| ||+++..+.++++++.++ +
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~g---------------rr~vl~~~~~~~~~~~~~-----~ 85 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFP---------------KGRVMFIANGIKLLGCLL-----M 85 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccC---------------CchhhHHHHHHHHHHHHH-----H
Confidence 355678999999999988888877776 7899999999999 999999999999988877 4
Q ss_pred ccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHH
Q 009130 115 GLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVL 193 (543)
Q Consensus 115 ~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~ 193 (543)
.++.+ . ++.|+++|++.+...|...+++.|++| +||+++.|+......+|.+++|.+++.+.+.. |+..+.+
T Consensus 86 ~~~~~---~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i 158 (393)
T PRK11195 86 LFGIH---P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAV 158 (393)
T ss_pred HHHHH---H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 33332 2 678999999999999999999999998 68999999999999999999999988875421 1111111
Q ss_pred HHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccc
Q 009130 194 ALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAIT 273 (543)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (543)
......++. + .....+
T Consensus 159 ~~~~~~~~~-------------------------------------------------------------~---~~~~l~ 174 (393)
T PRK11195 159 CALIYLLAA-------------------------------------------------------------L---FNLFIP 174 (393)
T ss_pred HHHHHHHHH-------------------------------------------------------------H---HHhcCC
Confidence 111000000 0 000111
Q ss_pred cccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchH
Q 009130 274 ADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIA 353 (543)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~ 353 (543)
+++++++ +.+.++ ....++.....++++++|.+.......++............+
T Consensus 175 ~~~~~~~-----------------~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T PRK11195 175 RLGARRP-----------------GQSWNP--------IALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVL 229 (393)
T ss_pred CCccccc-----------------ccCCCH--------HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110000 000000 000001112235667777766544443333333334444455
Q ss_pred HHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHH
Q 009130 354 QVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMI 431 (543)
Q Consensus 354 ~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l 431 (543)
.+.++ +|+++.+.+...+..+++..++.+..+++.||.+++ ..+..+..+ .+..+.+. .++.+...+..++
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~------~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL------RVLPAGILM-GLVVLLMALQHSLLPAYPLLIL 302 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc------chHHHHHHH-HHHHHHHHHHhHHHHHHHHHHH
Confidence 66654 699999999999999999999999999998876432 344444332 23332333 2333334455667
Q ss_pred HHhhhhhhhhhHHHHHHhhcCCcc-hhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 009130 432 VGVCYGSQWSLMPTITSEIFGVRH-MGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFV 510 (543)
Q Consensus 432 ~G~~~g~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~ 510 (543)
.|++.+...+...+.+.+..|++. +|.+.++.++...++.. ++..+.+.+ +..| -+..+++....
T Consensus 303 ~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~-~~~~~~~~~-~~~~------------~~~~~~~~~~~ 368 (393)
T PRK11195 303 IGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAML-LMLGLYSLL-VKLG------------VPVVAVIVGFG 368 (393)
T ss_pred HHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHH-HHHHHHHHH-HHcC------------CCHHHHHHHHH
Confidence 788888777667777767644443 69999999999999874 676667644 5555 56677766665
Q ss_pred HHHHHHHHHHH
Q 009130 511 AFFGSLVAFLL 521 (543)
Q Consensus 511 ~~~~~i~~~~~ 521 (543)
.++++.+.+..
T Consensus 369 ~~~~~~~~~~~ 379 (393)
T PRK11195 369 LLVALAMALLW 379 (393)
T ss_pred HHHHHHHHHHH
Confidence 56665554443
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=4.3e-24 Score=217.39 Aligned_cols=350 Identities=12% Similarity=-0.001 Sum_probs=228.8
Q ss_pred ccccccccHHHHhhcC--CChhhHHHHHHH--hhhcc----cccchhhHhhhhcccccccccccccccCCchHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQN--YDQSTLERVAVF--KDMGG----SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAI 100 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~--~s~~~~~~~~~~--~~~~~----~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~ 100 (543)
.+.++...+.+.+++. .++.+.+.+.+. +..+. ..+++.|++.||+| ||+++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g---------------~r~~l~~~~~ 73 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIG---------------RKKTLVITLL 73 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhh---------------hHHHHHHHHH
Confidence 3455666777777754 445555533222 12211 24678999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCh-----HHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHH
Q 009130 101 LCFTGYFLVWASVVGLLPRPVP-----VPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVL 174 (543)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~ 174 (543)
+..++.++ ++++++... ...+++.|+++|++.+...+....++.|++| ++|+++.++...+..+|.+++
T Consensus 74 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~ 148 (394)
T TIGR00883 74 MMGIGTLL-----IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLA 148 (394)
T ss_pred HHHHHHHH-----HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHH
Confidence 99999998 666666200 1247789999999999999999999999997 689999999999999999999
Q ss_pred HHHHHHhc--------CCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 009130 175 TQVYKTVC--------NGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLL 246 (543)
Q Consensus 175 ~~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (543)
+.+...+. +...|++.+....+..++++....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---------------------------------------- 188 (394)
T TIGR00883 149 ALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRR---------------------------------------- 188 (394)
T ss_pred HHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 87765542 123455444433322221111000
Q ss_pred cchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhh
Q 009130 247 TFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAM 326 (543)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (543)
..+++++.++ + + +++ +....+.++.+
T Consensus 189 ------------------------~~~~~~~~~~------------------~-~--------~~~---~~~~~~~~~~~ 214 (394)
T TIGR00883 189 ------------------------NLEETPVFEK------------------A-Q--------EKH---KKKRGPIRETL 214 (394)
T ss_pred ------------------------hcCCChhHHH------------------H-H--------hcc---ccccCCHHHHH
Confidence 0011100000 0 0 000 00011234444
Q ss_pred cchh--HHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 327 CTGN--FWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 327 ~~~~--f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
+++. ++......++..........+.|.+.+ +.|.++.+.+....+..++..+++++.|+++||++|| +.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~------~~~ 288 (394)
T TIGR00883 215 TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR------PVL 288 (394)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH------HHH
Confidence 4444 666666666555555666777888884 5799999999999999999999999999999999754 333
Q ss_pred HHHH-HHHHHHHHH-Hh-h--cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHH-Hhhhhhhhhhhhhh
Q 009130 404 VITL-VAMSIGHIA-IA-S--GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTI-SIACPVGSYICSVR 477 (543)
Q Consensus 404 ~~~~-~~~~i~~~~-~~-~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~ig~~i~~~~ 477 (543)
.... +....+... .. . .+........++.|++.+...+...+++.|.+|+++++++.|+. ++...+|+ .++|.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~-~~~p~ 367 (394)
T TIGR00883 289 IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG-GFAPY 367 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh-hHHHH
Confidence 3222 222222111 11 1 23333445566778888888888899999999999999999985 55566777 48899
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFV 510 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~ 510 (543)
+.|.+.|..|. |+..++...++
T Consensus 368 ~~g~l~~~~g~-----------~~~~~~~~~~~ 389 (394)
T TIGR00883 368 IAAALVAMTGD-----------WYAIGYYLAAL 389 (394)
T ss_pred HHHHHHHHcCc-----------chhHHHHHHHH
Confidence 99999998763 66665555443
No 71
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=4.1e-24 Score=215.64 Aligned_cols=327 Identities=14% Similarity=0.134 Sum_probs=216.0
Q ss_pred ccccccccHH-HHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSST-LKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGY 106 (543)
Q Consensus 29 ~~~~~~~~~~-l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~ 106 (543)
.+.++.+.|. +++++|+|+.+.+++.+...++.. .+++.|++.||+| ||+++.++.++..++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---------------~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFG---------------PRYTTTLSLLLLAIPC 81 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhC---------------chHHHHHHHHHHHHHH
Confidence 4667888885 999999999999988887777775 7889999999999 9999999999999999
Q ss_pred HHHHHHHhccCC-CCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC-
Q 009130 107 FLVWASVVGLLP-RPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN- 183 (543)
Q Consensus 107 ~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~- 183 (543)
++ +++++ + ++.+++.|+++|++.+. +++...++++++| ++|++++++......+|..+++.+...+..
T Consensus 82 ~~-----~~~~~~~---~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 82 LW-----AGLAVQS---YSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HH-----HHHHhhh---HHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 88 55666 5 78899999999999664 5667788999998 689999999987777777776665544321
Q ss_pred ---------CCchhHHH-HH-HHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhH
Q 009130 184 ---------GNPSTYIL-VL-ALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWA 252 (543)
Q Consensus 184 ---------~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (543)
..+|++.+ +. +.+..+..++...+
T Consensus 153 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 187 (366)
T TIGR00886 153 LIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFV--------------------------------------------- 187 (366)
T ss_pred HHhcccccccccccchhHHHHHHHHHHHHHHHHHh---------------------------------------------
Confidence 11344444 21 11111111110000
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHH
Q 009130 253 RIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFW 332 (543)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 332 (543)
.++.+++++ + + ++++ .+++. .. .+++.....++.++++++|
T Consensus 188 -------------------~~~~~~~~~---~-~--~~~~------~~~~~-------~~-~~~~~~~~~~~~~~~~~~~ 228 (366)
T TIGR00886 188 -------------------GADTPPGKP---A-T--GKLS------FKGAR-------WS-VGTGALGDQLKVFRDRHTW 228 (366)
T ss_pred -------------------cccCCcccc---c-c--hhcc------ccccc-------cc-ccchhHHHHHHHHhccchh
Confidence 111111100 0 0 0000 00000 00 0000112346778899999
Q ss_pred HHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 009130 333 FLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMS 411 (543)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~ 411 (543)
...+..++.......+..+.|.++++ +|+++.+++.+.++..+.+.+++++.|+++||+++| +.+..+.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~~~~~~~ 302 (366)
T TIGR00886 229 ILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA------RKLLMSFLGVA 302 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc------hhHHHHHHHHH
Confidence 88888777766666777888888865 599999999999999999999999999999999764 23333333333
Q ss_pred HHHHHH--hhc---CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhh
Q 009130 412 IGHIAI--ASG---FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVG 470 (543)
Q Consensus 412 i~~~~~--~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig 470 (543)
.+..++ ... +.....+...+.+++.|...+...+++++.+| +++|+++|+.+....+|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 303 MGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 333322 222 22222333344444555555556667778776 79999999998877765
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.93 E-value=3.5e-23 Score=211.05 Aligned_cols=330 Identities=12% Similarity=-0.023 Sum_probs=227.5
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
+.+....|.+.+++|+++.+.+++.+.+.++.. .+++.|+++||+| ||+++..+.++.+++.++
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g---------------rr~~~~~~~~~~~~~~~~ 89 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVG---------------RRPVILVGMSIFILGTLV 89 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcC---------------ChHHHHHHHHHHHHHHHH
Confidence 344556789999999999999977777777776 6889999999999 999999999999998888
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
..++++ ++.+++.|++.|++.+...+.......|+++ ++++++.++...+..++..++|++.+.+.+..+|
T Consensus 90 -----~~~~~~---~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 90 -----ALFAHS---LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred -----HHHHcc---HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 555565 7889999999999998887777778889998 6799999999999999999999998888766677
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
++.+....+...+..+...+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~------------------------------------------------------------ 181 (394)
T PRK11652 162 RACYLFLLLLGAGVTFSMAR------------------------------------------------------------ 181 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------------------------------------------------
Confidence 76665543322211100000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..+++++++ . ++ ++.....++.++++.+|...+..+........
T Consensus 182 ---~~~~~~~~~-------------------~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (394)
T PRK11652 182 ---WMPETRPAD-------------------A----------RR----TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAV 225 (394)
T ss_pred ---hCCccCccc-------------------c----------ch----hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 001100000 0 00 00123346677888887666554443333333
Q ss_pred hhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---cCcc
Q 009130 348 TMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS---GFPG 423 (543)
Q Consensus 348 ~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~---~~~~ 423 (543)
+....+.+.++ .|+++.+.+.......++..++.++.+++.||.+++ ............+....... .+..
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVMNVW 300 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 44455666766 799999988888888888888888888888887522 11111122222222222211 2233
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~ 485 (543)
......++.+++.+...+.......|.+| ++++++.++.+....+|.. +++.+.+.+.+.
T Consensus 301 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~-~~~~~~~~~~~~ 360 (394)
T PRK11652 301 TLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSG-LAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHH-HHHHHHHHccCC
Confidence 45556677788888888888888888886 6889999999888888884 777777776554
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=1.8e-23 Score=213.91 Aligned_cols=359 Identities=11% Similarity=0.015 Sum_probs=238.8
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~ 110 (543)
++.+.+.+.+++|++..|+|++.+...++.. .+++.|.++||+| ++|+++.++.++.+++..+
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g--------------~~r~~~~~~~~~~~~~~~~-- 85 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWL--------------SAQKVYAVCHFAGALLLFF-- 85 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------ccHHHHHHHHHHHHHHHHH--
Confidence 4667788899999999999988777777765 7889999999996 2588888888888777777
Q ss_pred HHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHH-----------hhhcCCCCcchhHHHHHhhhhhHHHHHHHHH
Q 009130 111 ASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTG-----------VMNFGHYSGTIVGILKGFVGLSGAVLTQVYK 179 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~-----------~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~ 179 (543)
..+.++ ++.++..|++.|++.+...+...+.. .+.++ |.+..|. +|.++++.+++
T Consensus 86 ---~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~--~~r~~G~------lG~~ig~~l~g 151 (418)
T TIGR00889 86 ---AAQVTT---PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP--PIRVMGT------IGFIAAMWAVS 151 (418)
T ss_pred ---HHHhcC---HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC--Ceeeehh------HHHHHHHHHHH
Confidence 555665 78888899999988776666554442 22333 4444542 56666666665
Q ss_pred HhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHH
Q 009130 180 TVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFII 259 (543)
Q Consensus 180 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (543)
.+.....|..++..+.+..+. ++
T Consensus 152 ~l~~~~~~~~f~~~~~~~~~~-~~-------------------------------------------------------- 174 (418)
T TIGR00889 152 LLDIELSNIQLYITAGSSALL-GV-------------------------------------------------------- 174 (418)
T ss_pred HhcccchhHHHHHHHHHHHHH-HH--------------------------------------------------------
Confidence 552222233222222221111 00
Q ss_pred HHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHH
Q 009130 260 LLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATL 339 (543)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~ 339 (543)
. ....+++++.++ +++ .+. ++....+.++.+|+|.++.+.+..+
T Consensus 175 ----~----~~~~~e~~~~~~------------------~~~--------~~~--~~~~~~~~~~~~k~~~~~~~~~~~~ 218 (418)
T TIGR00889 175 ----F----ALTLPDIPVAKS------------------TAK--------MSI--KVMLGLDAFILFKNKRMAIFFFFSM 218 (418)
T ss_pred ----H----HhcCCCCCCCcc------------------ccc--------cCH--HHHhhhhHHHHhcCCCeeeHHHHHH
Confidence 0 001111110000 000 000 0111123456789999888777777
Q ss_pred hhhchhhhhhhchHHHHHhhCCCc--------hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 009130 340 CGMGSGIATMNNIAQVGESLHYST--------TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMS 411 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~g~s~--------~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~ 411 (543)
+..........+.+.+.++.|.++ +..+...++..+..+++.+..|+++||+++| +++..+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r------~~l~~~~~~~~ 292 (418)
T TIGR00889 219 LLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK------KVMLLSLVAWA 292 (418)
T ss_pred HHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHHHH
Confidence 655444444556677777777654 5568888999999999999999999999544 67777777777
Q ss_pred HHHHHHhh-c-Cc---chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHH-hhhhhhhhhhhhhhhhhhhhh
Q 009130 412 IGHIAIAS-G-FP---GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIS-IACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 412 i~~~~~~~-~-~~---~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~ig~~i~~~~l~g~l~~~ 485 (543)
++..++.. . +. ..+++..++.|++.+...+....++.|.+|++++++++|+.+ ....+|. +++|.+.|.+.|.
T Consensus 293 v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~-~iGp~l~G~l~~~ 371 (418)
T TIGR00889 293 LRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS-LLGYILSGVMVEK 371 (418)
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHH
Confidence 76555442 2 12 234556777888888777777888999999999999999997 6677888 5899999999998
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 009130 486 VASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 486 ~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
.|+. +..+|+..|++.+++.++++++.+++.++.+
T Consensus 372 ~g~~------~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 372 MFAY------GTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred hccc------cCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6520 1124999999998888888877777766543
No 74
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.9e-23 Score=208.56 Aligned_cols=397 Identities=11% Similarity=0.074 Sum_probs=266.8
Q ss_pred HHhhcC--CChhhHH----HHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 39 LKSTQN--YDQSTLE----RVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 39 l~~~~~--~s~~~~~----~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
+.+.+| .++.+.. .+.+++.+|.. .+...|.++||+| ||..+.++.++..++.++..+
T Consensus 45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~G---------------RK~~l~~~~~l~~~~~~~~~~ 109 (485)
T KOG0569|consen 45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFG---------------RKNALLLSNLLAVLAALLMGL 109 (485)
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------chHHHHHHHHHHHHHHHHHHH
Confidence 345566 5555544 44556667766 5668999999999 999999999999888888554
Q ss_pred HHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHH-hc-CCCchh
Q 009130 112 SVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKT-VC-NGNPST 188 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~-l~-~~~~~~ 188 (543)
+..+++ +..++++|++.|+.+|........++.|.-| +.||..-.....+..+|..++..++.- +. +++.|.
T Consensus 110 --s~~~~~---~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~ 184 (485)
T KOG0569|consen 110 --SKSAPS---FEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWP 184 (485)
T ss_pred --HHHhhh---HHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchH
Confidence 333343 8889999999999999999999999999999 569999999888888888888666643 33 556799
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcc-cchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVD-DKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
+.+....+|.++.++..++.++.|..--. +++...+...+
T Consensus 185 ~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl--------------------------------------- 225 (485)
T KOG0569|consen 185 YLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKAL--------------------------------------- 225 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHH---------------------------------------
Confidence 99999999999999988888777641000 00000000000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHH-----HHHHHHhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWF-----LCIATLCGM 342 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-----~~l~~~~~~ 342 (543)
+ .....++++ ++.++..+..++++..+.++.+.+++++++.... +.+......
T Consensus 226 ------~---------~y~G~~~~~-------~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~ 283 (485)
T KOG0569|consen 226 ------K---------FYRGKEDVE-------AEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQF 283 (485)
T ss_pred ------H---------HHhCCCcch-------hHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHh
Confidence 0 000000000 0000000000111111124466778887654322 222222233
Q ss_pred chhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----
Q 009130 343 GSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA---- 418 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~---- 418 (543)
.+......+...++++.|+++.++.+.....++.+.+..+++.++.||+|| |++++.+..++.+..+++.
T Consensus 284 sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gR------RpLll~~~~~~~~~~~~~~~~~~ 357 (485)
T KOG0569|consen 284 SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGR------RPLLLISLSLMAVALLLMSIALF 357 (485)
T ss_pred cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445566677788889999999999999999999999999999999965 4788888777766655443
Q ss_pred hc--C-cch---HHHHHHHHHhhhhhh-hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCC
Q 009130 419 SG--F-PGN---LFVGTMIVGVCYGSQ-WSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGED 491 (543)
Q Consensus 419 ~~--~-~~~---~~~~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~ 491 (543)
.. . .+. .+++.++..+.++.. -++.+-+.+|++|++.|+.+.++....+++..++++ ..+..+.+..|.
T Consensus 358 l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~-~~fp~l~~~~g~--- 433 (485)
T KOG0569|consen 358 LSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG-FAFPPLQNVIGP--- 433 (485)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcc---
Confidence 11 1 111 123333333333333 345567899999999999999999999999886544 567777787762
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHh
Q 009130 492 HTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRFYNQVVIRR 536 (543)
Q Consensus 492 ~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 536 (543)
..|..+.+.+.+..+..+...+|+|++...+..++
T Consensus 434 ----------~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~ 468 (485)
T KOG0569|consen 434 ----------YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEE 468 (485)
T ss_pred ----------hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 67788888888888888888999998776655444
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.92 E-value=3.3e-22 Score=202.89 Aligned_cols=342 Identities=11% Similarity=-0.072 Sum_probs=232.3
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCch----HHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPW----VVHFTGAILCFTGYF 107 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r----~~~~~g~~~~~~g~~ 107 (543)
..+.|.+.+|+|.|..+++++.+.+.+... .+++.|++.||+| || +.+.++.++..+ .
T Consensus 24 ~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g---------------~~~~~~~~~~~~~~~~~~--~ 86 (382)
T PRK11128 24 LPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPS---------------QLIPALRLLALLTLLFAV--A 86 (382)
T ss_pred hhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhc---------------chHHHHHHHHHHHHHHHH--H
Confidence 344566778899999999977666666655 7889999999998 53 333333222221 1
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
. ....++ ++.+++.|++.|++.+...+...++..+| +++|+++.+.......+|.+++|++++.+.+..+|
T Consensus 87 ~-----~~~~~~---~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~ 157 (382)
T PRK11128 87 F-----WFGAHS---FWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE 157 (382)
T ss_pred H-----HHhccc---HHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 1 223344 88888999999998888777766665554 66788999999999999999999999998877677
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
+..++...+..++..+...
T Consensus 158 ~~~f~~~~~~~~~~~~~~~------------------------------------------------------------- 176 (382)
T PRK11128 158 QAILWILTAGVASMLLGQL------------------------------------------------------------- 176 (382)
T ss_pred hHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 7665543322111110000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh
Q 009130 268 LRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~ 347 (543)
..++ +.+ +++ + + ++ .++...+.++.+|+|.+|...+..++.......
T Consensus 177 ----~~~~--~~~---~~~----------~-~-----------~~--~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~ 223 (382)
T PRK11128 177 ----LRPT--IMP---QGE----------S-R-----------QQ--ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAA 223 (382)
T ss_pred ----ccCC--CCC---ccc----------c-c-----------cc--cccccchHHHHHcChhHHHHHHHHHHHHHHhHh
Confidence 0000 000 000 0 0 00 000113457889999999887776666555555
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 426 (543)
...+.|.+.++.|+++.+.+.+.++..++..+..++.|++.||+++| +.+..+.+...++.+++. .++++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR------DLLLLSAICGVVRWGLMGSTTALPWLI 297 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 66677888888999999999999988899999999999999998544 566667777666665554 44555667
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHH-hhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIS-IACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
+..++.|++.+...+....+..+. +++++++..+..+ ....+|. .++|.+.|.+.|..| + ..|+
T Consensus 298 ~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~ig~~i~G~l~~~~g------------~-~~~~ 362 (382)
T PRK11128 298 VIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSI-AIMTVLSGFLYQHLG------------A-GVFW 362 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcc------------H-HHHH
Confidence 778888888887777777777776 5667788888876 4455565 488999999999886 4 4566
Q ss_pred HHHHHHHHHH
Q 009130 506 IMAFVAFFGS 515 (543)
Q Consensus 506 ~~~~~~~~~~ 515 (543)
..+++.+++.
T Consensus 363 ~~~~~~~~~~ 372 (382)
T PRK11128 363 VMALVALPAL 372 (382)
T ss_pred HHHHHHHHHH
Confidence 6655554443
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=2.3e-22 Score=204.75 Aligned_cols=349 Identities=10% Similarity=0.002 Sum_probs=217.3
Q ss_pred ccccccHHHHhhcCCChhhHHHH-HHHhhhcccccchhhHhhhhcccccccccccccccCCchHHH-HHHHHHHHHHHHH
Q 009130 31 TFSIYSSTLKSTQNYDQSTLERV-AVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVH-FTGAILCFTGYFL 108 (543)
Q Consensus 31 ~~~~~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~-~~g~~~~~~g~~~ 108 (543)
..+.+.+++++|+|++.++++++ +.....+...+++.+...||+| +|+.+ ..+.++.+++..+
T Consensus 34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g---------------~r~~~~~~~~~~~~~~~~~ 98 (393)
T PRK15011 34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRG---------------DRKSLIVFCCLLGVLACTL 98 (393)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------chhHHHHHHHHHHHHHHHH
Confidence 34566677899999999999966 4455666666666555599998 88765 4555555566666
Q ss_pred HHHHHhccCCCCChHHHHHHHH-HHHhcCcchhhhhHHHHHhhhcCC-CC--cchhHHHHHhhhhhHHHHHHHHHHhcCC
Q 009130 109 VWASVVGLLPRPVPVPLMCLFI-FTAAHAQNFFNTGNIVTGVMNFGH-YS--GTIVGILKGFVGLSGAVLTQVYKTVCNG 184 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r-~l~G~g~g~~~~~~~~~~~~~fp~-~r--g~~~gi~~~~~~lg~~i~~~l~~~l~~~ 184 (543)
.+++++ ++.+++.+ ++.|.+ +...+.......++.|+ +| +...++...+.++|.+++|++++.+.+.
T Consensus 99 -----~~~~~~---~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~ 169 (393)
T PRK15011 99 -----FAWNRN---YFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG 169 (393)
T ss_pred -----HHHhhH---HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 445555 66665554 445454 45566666666676653 34 3345788889999999999999998777
Q ss_pred CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHh
Q 009130 185 NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLL 264 (543)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (543)
.+|++.+....+..++..+...+
T Consensus 170 ~gw~~~f~~~~~~~~~~~~~~~~--------------------------------------------------------- 192 (393)
T PRK15011 170 FSFTVMYLSAAVAFIVCGVMVWL--------------------------------------------------------- 192 (393)
T ss_pred cChHHHHHHHHHHHHHHHHHHHh---------------------------------------------------------
Confidence 77887766554333221111000
Q ss_pred hcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhch
Q 009130 265 ASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGS 344 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~ 344 (543)
..++.+++++ + .+++ .+. . ++ +.+..+......+.....
T Consensus 193 ------~~~~~~~~~~---~--------------~~~~-------~~~-~--------~~--~~~~~~~~~~~~~~~~~~ 231 (393)
T PRK15011 193 ------FLPSMRKELP---L--------------ATGT-------LEA-P--------RR--NRRDTLLLFVICTLMWGT 231 (393)
T ss_pred ------hcCccCCCCc---c--------------cccc-------ccc-c--------cc--ccccHHHHHHHHHHHHHH
Confidence 0111100000 0 0000 000 0 00 001122222222333333
Q ss_pred hhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 345 GIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 345 ~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
...+..+.|.+.+ ++|+++.+++.+.+...+..++++++.|+++||+++| +.+..+.+...+.+.... .+++
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~------~~~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR------FLMRVAAVAGVCFYAGMLMAHSP 305 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH------HHHHHHHHHHHHHHHHHHHHhhH
Confidence 3445567787775 4699999999888888888889999999999999764 344444443333333222 3344
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
....+..++.+++.+...+..+.+..|.+| ++++++.++.+....+|. .++|.+.|.+.|..+ |+.
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~-~~g~~l~G~i~~~~g------------~~~ 371 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGW-IIAGSLAGIVAEIWN------------YHA 371 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHhh------------hHH
Confidence 444444555556666655666677788887 469999999888888888 488999999999876 999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009130 503 SFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~ 521 (543)
.|++..++.+++++..+..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 372 VFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9888887777766654443
No 77
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=9e-23 Score=205.10 Aligned_cols=323 Identities=11% Similarity=-0.012 Sum_probs=217.3
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHH-HHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVV-HFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~-~~~g~~~~~~g~~~~~ 110 (543)
.+...|.+.+|+|+|.+|++++....... ..+++.|++.||++ .+|+||||. ++.+.++.++....
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~g~~~Dr~~----------~~~~Grr~~~l~~~~~~~~~~~~~-- 73 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLVGLPY-SLKFLWSPLVDTVY----------LPFFGRRRSWLVLTQVLLLSLLLI-- 73 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccc----------CCCCCccHHHHHHHHHHHHHHHHH--
Confidence 45567899999999999999775553333 34889999999985 234568776 56677777777666
Q ss_pred HHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc---
Q 009130 111 ASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP--- 186 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~--- 186 (543)
.++..+....+.+....++.+++.+...++..+++.|++| ++|+++.++...+..+|.++++.++..+.+..+
T Consensus 74 ---l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~ 150 (356)
T TIGR00901 74 ---LSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT 150 (356)
T ss_pred ---HHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 4444322135667777788888888888888899999997 689999999999999999999988877754433
Q ss_pred -----hhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Q 009130 187 -----STYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILL 261 (543)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (543)
|++.+....+..++.++...+
T Consensus 151 ~~~~~wr~~f~i~ai~~l~~~~~~~~------------------------------------------------------ 176 (356)
T TIGR00901 151 GLITLWGYIFFWTALLILPGLLVTLF------------------------------------------------------ 176 (356)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHH------------------------------------------------------
Confidence 665555444432221111000
Q ss_pred HHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchh---HHHHHHHH
Q 009130 262 LLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGN---FWFLCIAT 338 (543)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---f~~~~l~~ 338 (543)
..++ +++++ + +++ + .+++.....++.++++. ++.+.+..
T Consensus 177 ---------~~~e-~~~~~------------------~-~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (356)
T TIGR00901 177 ---------LAKE-PQEDA------------------S-VPK--------P-LTQAVLKPIREFFQRKNMIQALLLLLLI 218 (356)
T ss_pred ---------hccC-CCccc------------------c-cch--------h-HHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 0011 00000 0 000 0 00111123456666665 66666665
Q ss_pred HhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHH-HHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Q 009130 339 LCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWS-IWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAI 417 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~-i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~ 417 (543)
++..........+.|.+.++.|+++++.+......+ +...++.+++|++.||+++| +.+..+.++..+...++
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~------~~l~~~~~~~~~~~~~~ 292 (356)
T TIGR00901 219 VLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL------YALLLFGIVQALTNAGF 292 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH------HHHHHHHHHHHHHHHHH
Confidence 655555666777888898889999999998887766 57789999999999999754 34455555554444332
Q ss_pred h-h-----------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhh
Q 009130 418 A-S-----------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACP 468 (543)
Q Consensus 418 ~-~-----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 468 (543)
. . ++...+....++.+++.+...+...+++.|.+|++++|+.+|+.+...+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 293 VWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2 1 1122344455666888888899999999999999999999999876543
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.8e-22 Score=191.72 Aligned_cols=372 Identities=13% Similarity=0.062 Sum_probs=254.2
Q ss_pred hhhHHHHHHHHHHHHHcCCc-cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccc
Q 009130 10 NSKWIATVASIWIQCSVGTT-YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRF 87 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~~g~~-~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~ 87 (543)
..|.-.+++..++. .+|.. ....++.|.+++.|+++..|.+.+-.++..++. .++|.|.+.+|+|
T Consensus 10 ~~~~~~v~~t~lFf-l~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~g------------ 76 (422)
T COG0738 10 SVKLAFVLLTSLFF-LWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLG------------ 76 (422)
T ss_pred CceeHHHHHHHHHH-HHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhh------------
Confidence 33444333333332 34543 456789999999999999999988888888886 7889999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHh
Q 009130 88 LRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGF 166 (543)
Q Consensus 88 ~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~ 166 (543)
.|+.++.|+.++++|..+++= .+...+ +..++..-++.|.|.+...+.++.+++...| ++...-+++..+.
T Consensus 77 ---yk~gi~lgL~l~avg~~lF~p--Aa~~~~---y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~f 148 (422)
T COG0738 77 ---YKAGIVLGLLLYAVGAALFWP--AASSKS---YGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAF 148 (422)
T ss_pred ---hHHHHHHHHHHHHHHHHHHhh--hhhhhh---HHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHh
Confidence 999999999999999999642 122232 7778888999999999999999999999997 4677889999999
Q ss_pred hhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 009130 167 VGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLL 246 (543)
Q Consensus 167 ~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (543)
+++|.+++|++++.++..+ |. ... +........ +.
T Consensus 149 n~lGa~~gp~~g~~lils~-~~--------------------~~~-----~~~~~~~~~---~~---------------- 183 (422)
T COG0738 149 NGLGAILGPLLGSSLILSG-VA--------------------LTM-----SAAQILAIK---GA---------------- 183 (422)
T ss_pred hhhHHHHHHHHHHHHHHhh-hh--------------------hcc-----CHHHHHHHH---HH----------------
Confidence 9999999999999886322 00 000 000000000 00
Q ss_pred cchhhHH-HHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHh
Q 009130 247 TFSLWAR-IITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQA 325 (543)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (543)
....+.+ ...++..++++.+.. ...+.|+.++ .+ ++..+.++....++
T Consensus 184 ~~~~v~~pYl~~~~~lvll~v~~--~~~k~p~~~~-------------------~~----------~~~~~~~~~~~~~l 232 (422)
T COG0738 184 DASSVQFPYLILAGLLVLLAVLI--LLSKLPDLQV-------------------AA----------PSLGASGSAGLSSL 232 (422)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHH--HhccCCcCCc-------------------cc----------ccccccccchHHHH
Confidence 0000000 000001111111110 0111111100 00 00001111145788
Q ss_pred hcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHH
Q 009130 326 MCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMV 404 (543)
Q Consensus 326 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~ 404 (543)
+++|.++.-.+..|+..+.....-.+++.++.+ .|.+..+++...+.+..+.++||+++-++..|+.. .+.+.
T Consensus 233 ~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~------~k~La 306 (422)
T COG0738 233 FQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP------EKYLA 306 (422)
T ss_pred HhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH------HHHHH
Confidence 999999999999999999999999999999988 79999999999999999999999999888888843 24455
Q ss_pred HHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 405 ITLVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 405 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
+..++.++.++.....+......+..+.|+.++..+|...+...+..| ++-..+.+++.+ ..+|+. +-|++.|++.|
T Consensus 307 f~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-aivGGA-iiP~l~G~i~d 383 (422)
T COG0738 307 FYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AIVGGA-IIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-heecch-HHHHHHHHHHH
Confidence 555444444444443333445556778899999999999999999999 555555555544 446664 45889999999
Q ss_pred hcc
Q 009130 485 RVA 487 (543)
Q Consensus 485 ~~g 487 (543)
..|
T Consensus 384 ~~g 386 (422)
T COG0738 384 MFG 386 (422)
T ss_pred hhh
Confidence 987
No 79
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=4.5e-22 Score=205.10 Aligned_cols=424 Identities=10% Similarity=0.011 Sum_probs=277.1
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~ 110 (543)
.+...+.+..|+|-+ ....|++....++.. ..++.|.++|.|| ||+.++++.++..+|.+.
T Consensus 63 ~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfG---------------Rr~~~i~g~~l~vvG~Iv-- 124 (599)
T PF06609_consen 63 PASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFG---------------RRYFFIIGSLLGVVGSIV-- 124 (599)
T ss_pred cHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhc---------------chHHHHHHHHHHHhHHHH--
Confidence 344557899999865 555577777777765 6778999999999 999999999999999999
Q ss_pred HHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhH
Q 009130 111 ASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTY 189 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~ 189 (543)
++.+++ ...++.+-.+.|+|.|.... ....++|..| |.|+...++.....-....+++.++..+..+.+|||
T Consensus 125 ---~atA~~---~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw 197 (599)
T PF06609_consen 125 ---CATAQN---MNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRW 197 (599)
T ss_pred ---hhcCCc---HHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcch
Confidence 888888 89999999999999887765 4455899999 568887777776665555567777777777789999
Q ss_pred HHHHHHHHHHHHHHHH-hheeccCCCC-----cccchhhhhHHHHHHHHH-----HHHHHHHHHhhc-ccchhhHHHHHH
Q 009130 190 ILVLALLPTLVSLLFM-SHVRIYGTNS-----VDDKKHLNAFSAVAMTLA-----AYFMVITVMENL-LTFSLWARIITF 257 (543)
Q Consensus 190 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (543)
.+.+..+...++++.. .+..++++.+ .++++....++++|..+. .+++..+..+.. .+|.+...+..+
T Consensus 198 ~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~l 277 (599)
T PF06609_consen 198 IFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPL 277 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhH
Confidence 9988777656655443 3444333211 112344566777775542 333333333443 466666665444
Q ss_pred HHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcc-hhHHHHHH
Q 009130 258 IILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCT-GNFWFLCI 336 (543)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~f~~~~l 336 (543)
.+-.+++..+..+ |.... .++..-+.+++|+ |.+....+
T Consensus 278 viG~~~Lv~F~~w---E~~~~-------------------------------------~~~Pl~P~~Lf~~~r~~~~~lv 317 (599)
T PF06609_consen 278 VIGFVLLVAFVVW---EWFGA-------------------------------------PKDPLFPHRLFKDRRGFAALLV 317 (599)
T ss_pred HHHHHHHHHHHHh---hhhcc-------------------------------------CCCCcCCHHHhccchHHHHHHH
Confidence 3333322222211 11000 0011223567776 55666666
Q ss_pred HHHhhhchhhhhhhchHHHHHh-hCCCc---hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH
Q 009130 337 ATLCGMGSGIATMNNIAQVGES-LHYST---TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSI 412 (543)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~-~g~s~---~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i 412 (543)
..++....++....+.|+.... ++-|+ .+.++.....+++..+|.++.|.+.-+++|- |+.++++.+++.+
T Consensus 318 i~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-----Kw~li~~~~~~ta 392 (599)
T PF06609_consen 318 ISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-----KWQLIFGSVLMTA 392 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch-----hHHHHHHHHHHHH
Confidence 6666555566666666665543 34443 3567788888999999999999998877532 3566667767666
Q ss_pred HHHHHh---hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh-c--
Q 009130 413 GHIAIA---SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR-V-- 486 (543)
Q Consensus 413 ~~~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~-~-- 486 (543)
++.+++ ..+....+...++.|++.|.........+.-..|+++.|++.|+......+|+. ++.-++..++.. .
T Consensus 393 ~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGs-Ig~aIy~~I~~n~~~~ 471 (599)
T PF06609_consen 393 FCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGS-IGYAIYNAIFTNKLPK 471 (599)
T ss_pred HHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHhhhhH
Confidence 555554 234555667788889988887766666666678889999999999776666664 332233222110 0
Q ss_pred -------------cCCC----------------------C------------ccccccchhHHHHHHHHHHHHHHHHHHH
Q 009130 487 -------------ASGE----------------------D------------HTCYGTHCFMLSFMIMAFVAFFGSLVAF 519 (543)
Q Consensus 487 -------------g~~~----------------------~------------~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 519 (543)
|-++ + ....+.++|+++|++...+.+++.+.++
T Consensus 472 ~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~ 551 (599)
T PF06609_consen 472 ELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAAL 551 (599)
T ss_pred hHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0122456899999999999999999888
Q ss_pred HHhhcch
Q 009130 520 LLFLRTR 526 (543)
Q Consensus 520 ~~~~~~~ 526 (543)
++....+
T Consensus 552 fl~d~~~ 558 (599)
T PF06609_consen 552 FLGDIDK 558 (599)
T ss_pred HcCChHH
Confidence 8765433
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=9.4e-23 Score=235.08 Aligned_cols=350 Identities=10% Similarity=0.009 Sum_probs=234.7
Q ss_pred HHHhhcCCChhhH-HHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHH--HHHHHHHHHHHHHHHH
Q 009130 38 TLKSTQNYDQSTL-ERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFT--GAILCFTGYFLVWASV 113 (543)
Q Consensus 38 ~l~~~~~~s~~~~-~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~--g~~~~~~g~~~~~~~~ 113 (543)
.+..+.+.+.... ++..+.+.+.+. ++++.|.++||+| ||+++.. ...+......++
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~---------------rk~~~~~~~~~~~~~~~~~~~---- 101 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYD---------------KAKLAKILKFAEIGIAALAIY---- 101 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhcc---------------HHHHHHHHHHHHHHHHHHHHH----
Confidence 4444555554454 466666666664 7899999999998 8887533 221222221221
Q ss_pred hccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHH
Q 009130 114 VGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILV 192 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~ 192 (543)
+...++ ++.+++.|+++|++.+...+...+++.+++| ++|++++|+..++.++|.+++|++++.+....+|++.+.
T Consensus 102 ~~~~~s---~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~ 178 (1140)
T PRK06814 102 GFHLNS---VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVA 178 (1140)
T ss_pred HHHHhh---HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 222244 8999999999999999999999999999998 689999999999999999999999999987767766663
Q ss_pred HHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccccc
Q 009130 193 LALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAI 272 (543)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (543)
...+..+.+++.... .
T Consensus 179 ~~~~~~~~~~~~~~~----------------------------------------------------------------~ 194 (1140)
T PRK06814 179 LLMGIAVLGWLASLF----------------------------------------------------------------I 194 (1140)
T ss_pred HHHHHHHHHHHHHhh----------------------------------------------------------------C
Confidence 332222211111111 0
Q ss_pred ccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhch
Q 009130 273 TADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNI 352 (543)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 352 (543)
++++++.+ + . . .+....+.....++.+.+++.+|...+..++.......+..++
T Consensus 195 ~~~~~~~~---~------------~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1140)
T PRK06814 195 PKTGNAAP---D------------L-K----------IDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQL 248 (1140)
T ss_pred CCCCCCCC---C------------C-e----------eccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 11100000 0 0 0 0000001112345678889999998888777766666677788
Q ss_pred HHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h-----------
Q 009130 353 AQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-S----------- 419 (543)
Q Consensus 353 ~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~----------- 419 (543)
|.++++ +|.++.+.+++.+..+++.++|.++.|+++|+..++ ..+..+.++..++.+.+. .
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL------LYVPIGALLMGLFGLDLAFASSSVPAEPAQL 322 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee------eeehHHHHHHHHHHHHHHhcccccccccccc
Confidence 988876 599999999999999999999999999999876543 122222222222221111 1
Q ss_pred ---------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC
Q 009130 420 ---------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE 490 (543)
Q Consensus 420 ---------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~ 490 (543)
.+.+.+.+..+++|++.+...+...+++.+..|++++|+++|+.++...++. .+++.+.|.+.+...
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~-~ig~~~~g~l~~~~~--- 398 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFM-VAGTIILALLQALGF--- 398 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHH-HHHHHHHHHHHHhcc---
Confidence 3334455667788888888888888999999999999999999999988887 478888888876543
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHH
Q 009130 491 DHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 491 ~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
++...+++.+.+.++.+++
T Consensus 399 --------~~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 399 --------SIPWIILFIALANLIVAIL 417 (1140)
T ss_pred --------CHHHHHHHHHHHHHHHHHH
Confidence 2666666555544444433
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=4.6e-21 Score=199.05 Aligned_cols=410 Identities=10% Similarity=0.011 Sum_probs=241.9
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhh-hcccccchhhHhhhh-cccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKD-MGGSAGILSGLLFSY-VTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~d~-~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
.+.+..++++++|+++++.+++...+. +.+...+++|+++|| +| ||+++.+|.+++++++++
T Consensus 34 ~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G---------------~r~~~~~g~~~~~~g~~~- 97 (489)
T PRK10207 34 QGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG---------------TKRTIVLGAIVLAIGYFM- 97 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc---------------hHHHHHHHHHHHHHHHHH-
Confidence 346677889999999999986655544 555577799999999 88 999999999999999999
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-C--CCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-H--YSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
++++.+. ...+++.|+++|+|.|...+.....++|+|| + +|+.+.++...+.++|.+++|.+++++.+..+
T Consensus 98 ----~~~~~~~--~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 98 ----TGMSLLK--PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred ----HHHhccc--hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 6666552 3445678999999999999999999999997 4 35789999999999999999999999988888
Q ss_pred hhHHHHHHHHHHHHHHHHHhheeccCCC---Cccc--chhhhh-HHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Q 009130 187 STYILVLALLPTLVSLLFMSHVRIYGTN---SVDD--KKHLNA-FSAVAMTLAAYFMVITVMENLLTFSLWARIITFIIL 260 (543)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (543)
|++.|++..+....+++.....+...++ +++. .+.... ....++....+. .....+.. +..........
T Consensus 172 w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~ 246 (489)
T PRK10207 172 YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFV--CAWLMHNV---EVANLVLIVLS 246 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHH--HHHHHhhh---hHHHHHHHHHH
Confidence 9988888765555554444444322111 1111 111111 111111111111 11111111 11111111111
Q ss_pred HHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHH--H
Q 009130 261 LLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIA--T 338 (543)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~--~ 338 (543)
++....+ .+++ .+ . + +.+|+|.+-...+. .
T Consensus 247 ~i~~~~f----~~~~---~~-------------------------------~--~--------~~~r~r~~~~~~l~~~~ 278 (489)
T PRK10207 247 IVVTIIF----FREA---FK-------------------------------L--D--------KTGRNKMFVAFVLMLEA 278 (489)
T ss_pred HHHHHHH----HHHH---hc-------------------------------C--C--------HHHHHHHHHHHHHHHHH
Confidence 1111111 1110 00 0 0 12233333322211 2
Q ss_pred HhhhchhhhhhhchHHHHHh-h-----CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcC-CCchHHHHHHHHHHH
Q 009130 339 LCGMGSGIATMNNIAQVGES-L-----HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLG-WARPIFMVITLVAMS 411 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~-~-----g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~-~~r~~~~~~~~~~~~ 411 (543)
.+.+..+......++.+.++ . |+. -....+.++..+..++..++.+++.||+++|+. .+...-+.++.++..
T Consensus 279 ~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~-i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~ 357 (489)
T PRK10207 279 VVFYILYAQMPTSLNFFAINNVHHEILGFS-INPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCS 357 (489)
T ss_pred HHHHHHHHHcccHHHHHHHHhccccccceE-ECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHH
Confidence 22222222333445555543 2 222 123445556666676788888999999987631 122223445555555
Q ss_pred HHHHHH-------hh----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhh
Q 009130 412 IGHIAI-------AS----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIG 480 (543)
Q Consensus 412 i~~~~~-------~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g 480 (543)
++++.+ .. .+.+++....++.|+|.+...+.....+.+..|++.+|.+.|+.++...+|+. ++..+..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~-lg~~l~~ 436 (489)
T PRK10207 358 LGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL-LGGYVAT 436 (489)
T ss_pred HHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 554321 11 12344556677889999999999999999999999999999999988888884 5544444
Q ss_pred hhhhhccCCCCcccc--ccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 481 RIYDRVASGEDHTCY--GTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 481 ~l~~~~g~~~~~~~~--~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
..... ++..+. ....|.+.|...++..+++.++.++..
T Consensus 437 ~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~ 476 (489)
T PRK10207 437 FTAVP----DNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMV 476 (489)
T ss_pred Hhccc----cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33110 000000 011266677777766666665554443
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.90 E-value=1.9e-21 Score=198.67 Aligned_cols=354 Identities=10% Similarity=-0.024 Sum_probs=222.0
Q ss_pred ccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCch-HHHHHHHHHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPW-VVHFTGAILCFTGYFLVWASV 113 (543)
Q Consensus 35 ~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r-~~~~~g~~~~~~g~~~~~~~~ 113 (543)
..|.+-+|.|+|.+|++++...... ..+++++|++.||++ .+++||| +.+.++.++.+++..+
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~----------~~~~g~rr~~l~~~~~~~~l~~~~----- 84 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYT----------PPLLGRRRGWLLLTQVGLAASIAA----- 84 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHccc----------ccCCCcchhHHHHHHHHHHHHHHH-----
Confidence 4466666779999999977665554 468999999999993 1222355 4788888888777777
Q ss_pred hccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC-CchhHHH
Q 009130 114 VGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG-NPSTYIL 191 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~ 191 (543)
.++.....+++.+++..++.++..+...++..+++.|++| +||+++.++...+.++|..+++.+...+.+. .+|+..+
T Consensus 85 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f 164 (402)
T PRK11902 85 MAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTY 164 (402)
T ss_pred HHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHH
Confidence 3343221136777778888888888888888999999998 5699999999999999999999988887764 3677666
Q ss_pred HHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccc
Q 009130 192 VLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVA 271 (543)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (543)
.+..+...+..+...+
T Consensus 165 ~i~a~~~l~~~l~~~~---------------------------------------------------------------- 180 (402)
T PRK11902 165 LLMAGLMLAGALTTLW---------------------------------------------------------------- 180 (402)
T ss_pred HHHHHHHHHHHHHHHh----------------------------------------------------------------
Confidence 5444322221111000
Q ss_pred cccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhc
Q 009130 272 ITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNN 351 (543)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 351 (543)
.+++ ++++ +++ ++.+++.....++.+|+|.++.+.+..++..........+
T Consensus 181 ~~e~-~~~~------------------~~~----------~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~ 231 (402)
T PRK11902 181 APEP-EVPA------------------RPP----------RSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSL 231 (402)
T ss_pred cCCC-cccc------------------ccc----------chhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHH
Confidence 1111 0000 000 0000011234567889999887776655543332222223
Q ss_pred h-HHHHHhhCCCchhhHHHHHHHH-HHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH---HHhh-c-Ccch
Q 009130 352 I-AQVGESLHYSTTEINSLISLWS-IWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHI---AIAS-G-FPGN 424 (543)
Q Consensus 352 ~-~~~~~~~g~s~~~a~~~~~~~~-i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~---~~~~-~-~~~~ 424 (543)
. +.+.++.|+++++.+......+ ++..++.+++|++.||+++| +.+..+.++..+..+ ++.. . +...
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~------~~l~~~~~~~~l~~l~~~~~~~~~~~~~~ 305 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY------RSLMLFGVLQAVSNLGYWVLAVTPKHLWT 305 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 3 3344557999999999887655 46889999999999999754 344444443333322 2222 2 2232
Q ss_pred HHHHHH----HHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 425 LFVGTM----IVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 425 ~~~~~~----l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
+..... ..|++.+...+....++.+.+|.+++ +.......++..+. +.+.|.+.|..| |
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~-~~~~G~l~~~~G------------~ 368 (402)
T PRK11902 306 MALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYV-GPTSGYLVEAYG------------W 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHH-HHHHHHHHHHhC------------h
Confidence 333332 34455555555566666666665544 44444445565433 347999999998 9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 009130 501 MLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~~~ 520 (543)
+..|.+.+.++++++++...
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 98898888877777665433
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=9.8e-22 Score=227.38 Aligned_cols=359 Identities=13% Similarity=0.064 Sum_probs=237.2
Q ss_pred ccccHHHHhhcCCChhh--HHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQST--LERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~--~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
..+.+.+..+++.+.+. .+++.+.+.++.. ++++.|+++||+| ||++++.+.++..++.++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~g---------------rk~~l~~~~~~~~~~~~~~ 94 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFS---------------KNRVIRIVKLFEVGLTLLI 94 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccccc---------------HHHHHHHHHHHHHHHHHHH
Confidence 34445666777766544 4566677777765 7889999999999 9999998887766665553
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC----
Q 009130 110 WASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG---- 184 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~---- 184 (543)
.+ +..+.+ ++.+++.|+++|++.+...++...++++++| ++|++++|+...+.++|.++++.+++.+...
T Consensus 95 ~~--~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~ 169 (1146)
T PRK08633 95 VL--AYYLGW---FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN 169 (1146)
T ss_pred HH--HHHHcc---HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 22 333344 7999999999999999999999999999998 6899999999999999999999998877543
Q ss_pred -----CchhHHHHHHHHHH-HHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Q 009130 185 -----NPSTYILVLALLPT-LVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFI 258 (543)
Q Consensus 185 -----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (543)
.+|++.+....+.. ++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------- 194 (1146)
T PRK08633 170 TPSEILGRIAPAGLVLLAVAVLGLI------------------------------------------------------- 194 (1146)
T ss_pred cccccccchHHHHHHHHHHHHHHHH-------------------------------------------------------
Confidence 11122211111111 00000
Q ss_pred HHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHH
Q 009130 259 ILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIAT 338 (543)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~ 338 (543)
+. ...++.++... + . + + . .+....+.....++.+++++.++...+..
T Consensus 195 -----~~----~~~~~~~~~~~---~-------~--~-~-~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 195 -----FA----YRLPKVPAAAP---E-------V--F-D-K----------KKYLFPKLLWRNLKLLRSDRVLWLAIIGL 241 (1146)
T ss_pred -----HH----hcCcCCCCCCc---c-------c--c-c-c----------cccccHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 00 00111111000 0 0 0 0 0 00000111123456677888888777766
Q ss_pred HhhhchhhhhhhchHHHHHh-hCCCch-hhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Q 009130 339 LCGMGSGIATMNNIAQVGES-LHYSTT-EINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA 416 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~-~g~s~~-~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~ 416 (543)
++..........++|.++++ +|++.. +.+++.+...++.+++.+++|+++||++++ ..+.++.++.++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~------~~~~~~~~~~~~~~~~ 315 (1146)
T PRK08633 242 SYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL------GLVPLGALGLALSLFL 315 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc------cchhHHHHHHHHHHHH
Confidence 66555555566677777754 699988 899999999999999999999999998643 3444555555555554
Q ss_pred Hh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccc
Q 009130 417 IA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCY 495 (543)
Q Consensus 417 ~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~ 495 (543)
+. ..+.....+..++.|++.+...+...+++.+..|++.+|+++|+.++...++.. +++.+.+.+.. .+.
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~-~~~~~~~~l~~-~~~------- 386 (1146)
T PRK08633 316 LPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML-LFLALTTLFSG-LGL------- 386 (1146)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH-HHHHHHHHHHH-hcc-------
Confidence 44 334445566677888888888888888999999999999999999988888873 55555544433 220
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 009130 496 GTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 496 ~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
++...|++.+.+.++..+.
T Consensus 387 ---~~~~~~~~~~~~~~~~~~~ 405 (1146)
T PRK08633 387 ---SPAGLFYLIALVTLIGTLY 405 (1146)
T ss_pred ---CHHHHHHHHHHHHHHHHHH
Confidence 2445566555554444433
No 84
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.1e-24 Score=207.99 Aligned_cols=370 Identities=12% Similarity=-0.041 Sum_probs=236.9
Q ss_pred chhhHHHHHHHHHHHHHc-CCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccc
Q 009130 9 TNSKWIATVASIWIQCSV-GTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTR 86 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~ 86 (543)
.++.++.++...++.+.. ...|...-..+.++++||++++..+++...+.+... ++++.|+++|||+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN----------- 96 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYN----------- 96 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcC-----------
Confidence 344555555555555553 457777778899999999999999988888777765 8999999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHH
Q 009130 87 FLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKG 165 (543)
Q Consensus 87 ~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~ 165 (543)
||.++.+|..+++++.++ +++... +|++.++|.+.|+|++...+.+..+++|.|| ++|++++++++.
T Consensus 97 ----R~~v~~vG~~iW~~Av~~-----~~fs~~---Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~ 164 (493)
T KOG1330|consen 97 ----RKRVIAVGIFIWTLAVFA-----SGFSNH---FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYF 164 (493)
T ss_pred ----cceEEeeHHHHHHHHHHH-----HHHHHH---HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhh
Confidence 999999999999999999 777743 9999999999999999999999999999999 589999999999
Q ss_pred hhhhhHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHH-HHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHh
Q 009130 166 FVGLSGAVLTQVYKTVCNGN-PSTYILVLALLPTLVS-LLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVME 243 (543)
Q Consensus 166 ~~~lg~~i~~~l~~~l~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (543)
+...|..+|-++++.+-+.+ +|||.+....+..++. ++..++.
T Consensus 165 ~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~----------------------------------- 209 (493)
T KOG1330|consen 165 AIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV----------------------------------- 209 (493)
T ss_pred hcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc-----------------------------------
Confidence 99999999977777765544 3776665444333222 1111111
Q ss_pred hcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHH
Q 009130 244 NLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLL 323 (543)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (543)
++++++..+ + .+.+. +...+..+..+..+
T Consensus 210 -----------------------------~eP~rga~~--~--------------~~~~~------~~~~~~ts~~kDl~ 238 (493)
T KOG1330|consen 210 -----------------------------REPERGARD--E--------------VDGEN------KMVKPFTSVWKDLK 238 (493)
T ss_pred -----------------------------cCccccccc--c--------------cccCC------cCCCCccchHHHHH
Confidence 121111110 0 00000 00011112222334
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHH----hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCC-C
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE----SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW-A 398 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~-~ 398 (543)
.+.|++.+....+......+..-.+..|.|.+.. -.|++..+...+..+...++.+|.+++|.++||+.+.++- .
T Consensus 239 ~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~ 318 (493)
T KOG1330|consen 239 VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSG 318 (493)
T ss_pred HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhccccc
Confidence 4444444433333332222222234444454432 3477877777888899999999999999999998764321 2
Q ss_pred chHHHHHHHH----HHHHHHHHHh-hcC-cchHHHHHHHHHhhhhhh-hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 399 RPIFMVITLV----AMSIGHIAIA-SGF-PGNLFVGTMIVGVCYGSQ-WSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 399 r~~~~~~~~~----~~~i~~~~~~-~~~-~~~~~~~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
|...-..... ..+..+.+.. ..+ .....+..+++|...... ++....+..++.|+++|.+++++-.+...+.+
T Consensus 319 ~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fg 398 (493)
T KOG1330|consen 319 TLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFG 398 (493)
T ss_pred chhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhc
Confidence 2222111111 1122222222 122 222333444555544332 23344567889999999999999865554433
Q ss_pred hhhhhhhhhhhhhhcc
Q 009130 472 YICSVRIIGRIYDRVA 487 (543)
Q Consensus 472 ~i~~~~l~g~l~~~~g 487 (543)
-.-+|++.|.+.|+.-
T Consensus 399 d~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 399 DAASPYIVGILSDKLR 414 (493)
T ss_pred cCCCcceehhHHHHhh
Confidence 3456779999988754
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=2.1e-21 Score=198.05 Aligned_cols=362 Identities=11% Similarity=0.015 Sum_probs=231.0
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
+.+.+++++++|+++.+.+++.+...+... .+++.|+++||+| ||+.+..+.+..+++...+..
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~g---------------rr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLG---------------LKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHHHHHHHHHH
Confidence 344456778899999999977666666665 7899999999999 999998877666554443211
Q ss_pred HHhccCCCC--ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhH
Q 009130 112 SVVGLLPRP--VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTY 189 (543)
Q Consensus 112 ~~~~~~~~~--~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~ 189 (543)
....+.. .....+++.|++.|++.+...+.......+. .++++...|......++|.++++++++.+.+ .+|++
T Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~ 163 (396)
T TIGR00882 88 --YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQI 163 (396)
T ss_pred --HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhc-cCchH
Confidence 1111100 0123345668888888877766665555443 2345667788888889999999988776643 35665
Q ss_pred HHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccc
Q 009130 190 ILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLR 269 (543)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (543)
.+....+..++..+.....
T Consensus 164 ~f~~~~~~~~~~~~~~~~~------------------------------------------------------------- 182 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFA------------------------------------------------------------- 182 (396)
T ss_pred HHHHHHHHHHHHHHHHHHh-------------------------------------------------------------
Confidence 5544333222211111110
Q ss_pred cccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhh
Q 009130 270 VAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATM 349 (543)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~ 349 (543)
++++++++ +. + ++ .++ ++ ++.+..+.++.+|+|.+|.+.+..+..........
T Consensus 183 ---~~~~~~~~---~~-----~----~~-~~~---------~~--~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~ 235 (396)
T TIGR00882 183 ---KPKAPSSA---TV-----A----NA-LGA---------NA--SAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFD 235 (396)
T ss_pred ---CCCCchhh---hh-----h----cc-ccc---------cc--CCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 01100000 00 0 00 000 00 00111235788899998877666554443333444
Q ss_pred hchHHHHHhh----CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 009130 350 NNIAQVGESL----HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGN 424 (543)
Q Consensus 350 ~~~~~~~~~~----g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~ 424 (543)
.+.+.+.++. +.+....+...++..+...++.+..|++.||+++| +.+.++.++.++...+.. .++++.
T Consensus 236 ~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~------~~l~~~~~l~~l~~~~~~~~~~~~~ 309 (396)
T TIGR00882 236 QQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK------NALLIAGTIMSVRIIGSSFATTALE 309 (396)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------hhHHHHHHHHHHHHHHHHhcCChHH
Confidence 4566666553 45566778888888899999999999999999654 455666666666555544 455666
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHH-HHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNT-ISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
+++..++.|++.+........+..+..+++.+++..+. .+....+|+ .++|.+.|++.|..| |+.+
T Consensus 310 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~-~~~~~l~G~l~~~~G------------~~~~ 376 (396)
T TIGR00882 310 VVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAM-IFLSTLAGNMYDSIG------------FQGA 376 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHH-HHHHHhHHHHHHhcc------------cHHH
Confidence 66667777777665554455567777888888887766 567778888 488899999999887 9999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009130 504 FMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~ 520 (543)
|++.+++.++..++..+
T Consensus 377 f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 377 YLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999888877776554
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.89 E-value=5.4e-21 Score=197.80 Aligned_cols=340 Identities=10% Similarity=-0.014 Sum_probs=217.2
Q ss_pred cccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHH
Q 009130 34 IYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWAS 112 (543)
Q Consensus 34 ~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~ 112 (543)
.+.+.+.+++|+++.+.+++.+...+.. +..++.|.++||.+ +|+|| ||+.++.+.+.++++.+++
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~----~r~Gr------rr~~i~~~~~~~~i~~~~~--- 87 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTR----TRWGK------FRPWLLIGAIPFSIVLVLL--- 87 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCC----CCCCC------cchhHHHhHHHHHHHHHHH---
Confidence 3557788899999999996666655555 58999999999976 34444 4667888888888887773
Q ss_pred HhccCCCC---ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhc-C-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC----
Q 009130 113 VVGLLPRP---VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNF-G-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN---- 183 (543)
Q Consensus 113 ~~~~~~~~---~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~f-p-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~---- 183 (543)
...++. .....+++.+++.+++.+...++..+...+.. + ++|++..++...+..+|..+.+.+...+..
T Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~ 165 (437)
T TIGR00792 88 --FTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG 165 (437)
T ss_pred --HhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333321 01455666788888888877776667777776 3 679999999888888887777655443321
Q ss_pred ---CCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Q 009130 184 ---GNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIIL 260 (543)
Q Consensus 184 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (543)
...|++.+.+..+..
T Consensus 166 ~~~~~g~~~~~~i~~~l~-------------------------------------------------------------- 183 (437)
T TIGR00792 166 GDDKFGWFMFALVLALIG-------------------------------------------------------------- 183 (437)
T ss_pred CcccccHHHHHHHHHHHH--------------------------------------------------------------
Confidence 012222211111110
Q ss_pred HHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHh
Q 009130 261 LLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLC 340 (543)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~ 340 (543)
++.........++++++.+ +++ ++ +.+.....++.+++|.++.+.+..++
T Consensus 184 -~~~~~~~~~~~~e~~~~~~--------------------~~~-------~~--~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (437)
T TIGR00792 184 -VVSLIICFFGTKERYSEIP--------------------KNI-------EK--KLSLKQIFKALFKNDQLLILCLAYLF 233 (437)
T ss_pred -HHHHHHHHcCCEecCCCCC--------------------ccc-------cc--CCCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 0000111111111110000 000 00 00112335677899999988877776
Q ss_pred hhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh
Q 009130 341 GMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS 419 (543)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~ 419 (543)
............+.+.++ .+ ++.+.+.+..+..++.+++.+++++++||+++| +.+..+.++.+++.+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~------~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 234 YNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK------ILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred HHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHH
Confidence 655544444444444443 24 456677777888899999999999999999654 5666666666666554442
Q ss_pred --cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC
Q 009130 420 --GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 420 --~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~ 488 (543)
.+.....+..++.|++.+...+...++++|..+ +++.|.++|+.+....+|.. +++.+.|.+.|..|.
T Consensus 307 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~-lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 307 AGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA-LAGFLVGLILGIIGY 383 (437)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCC
Confidence 233344555667788888888888888888754 56689999999999999884 888899999887763
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=3.2e-20 Score=192.68 Aligned_cols=410 Identities=10% Similarity=-0.029 Sum_probs=244.4
Q ss_pred cccccHHHHhh--cCCChhhHHHHHHHhhhcc-cccchhhHhhhh-cccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKST--QNYDQSTLERVAVFKDMGG-SAGILSGLLFSY-VTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 32 ~~~~~~~l~~~--~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~-~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.+.+..+++++ +|+++.+.+.+.+.+.... ...+++|+++|| +| ||+++.++.++.+++.+
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G---------------~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWG---------------TKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcc---------------hHHHHHHHHHHHHHHHH
Confidence 34455566766 9999999996655555554 478899999999 78 99999999999999998
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CC---CcchhHHHHHhhhhhHHHHHHHHHHhcC
Q 009130 108 LVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HY---SGTIVGILKGFVGLSGAVLTQVYKTVCN 183 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~---rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 183 (543)
+ .+++++ ++.+++.|++.|+|.|...+.....+++++| ++ |+.+.++...+.++|.++++++.+.+.+
T Consensus 95 ~-----~~~~~~---~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 95 M-----LAMSIY---PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred H-----HHhccc---HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 8 555555 6778889999999999999999999999997 33 8889999999999999999999999887
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhheec-cCCCCcccc----hhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Q 009130 184 GNPSTYILVLALLPTLVSLLFMSHVRI-YGTNSVDDK----KHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFI 258 (543)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (543)
..+|++.+....+..+++++...+.++ .++.+.+.+ +..+.... .......
T Consensus 167 ~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~ 222 (475)
T TIGR00924 167 NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKL------------------------LLALLAA 222 (475)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHH------------------------HHHHHHH
Confidence 778888887766555555444433332 211110000 00000000 0000000
Q ss_pred HHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHH
Q 009130 259 ILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIAT 338 (543)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~ 338 (543)
+........ ..++. .... ..... ..-..-....+. ..++.....+..|...+..+++..
T Consensus 223 ~~~~~~~~~---~~~~~-~~~~------------~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~ 281 (475)
T TIGR00924 223 LALVFFCAW---LMHHV-VIAN------------ILLMT----VTLAVIIFFFRL-AFKPRLDAVARNKMYAYIVLFLEA 281 (475)
T ss_pred HHHHHHHHH---HHhcc-HHHH------------HHHHH----HHHHHHHHHHHH-HHhccCCHHHHhHHHHHHHHHHHH
Confidence 000000000 00000 0000 00000 000000000000 000000001111223344444444
Q ss_pred HhhhchhhhhhhchHHHHHh-hCCCc----hhhHHHHHHHHHHHhhhccccccchhhhhhhcC-CCchHHHHHHHHHHHH
Q 009130 339 LCGMGSGIATMNNIAQVGES-LHYST----TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLG-WARPIFMVITLVAMSI 412 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~-~g~s~----~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~-~~r~~~~~~~~~~~~i 412 (543)
.+.+..+....+.++.+.++ .+.+. ...+++.++..+..++..++..++-.|..||.. .....-+.++.++..+
T Consensus 282 ~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~ 361 (475)
T TIGR00924 282 VVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGA 361 (475)
T ss_pred HHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 44444333344445555543 22221 236677778887777777765555555554311 1111113566777666
Q ss_pred HHHHHh----------hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 413 GHIAIA----------SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 413 ~~~~~~----------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
++..+. ..+.+++.+..++.++|.....+...+++.+..|++.+|...|+......+|.. +++.+....
T Consensus 362 ~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~-l~~~~~~~~ 440 (475)
T TIGR00924 362 SFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSL-LGGYLATFG 440 (475)
T ss_pred HHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 665543 134566777888999999999999999999999999999999999999999885 666666666
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
.+..+ +...|...++.+++..++.+++.
T Consensus 441 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 441 AVPQG------------VTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred hcccc------------hhhHHHHHHHHHHHHHHHHHHHH
Confidence 55544 66666666666665555544443
No 88
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=6.3e-21 Score=178.57 Aligned_cols=407 Identities=12% Similarity=0.020 Sum_probs=257.2
Q ss_pred cccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 30 YTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 30 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
.-.+.+.|.+.+.+|.+..|..+++.....+.. .+..+|.++|++| |||.+.+......+...+
T Consensus 95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~g---------------rr~~f~~T~l~t~v~~~i 159 (528)
T KOG0253|consen 95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIG---------------RRKGFNLTFLVTGVFGVI 159 (528)
T ss_pred HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhh---------------cchhhhhhHHHHHHHHHh
Confidence 345667789999999999999999888888886 4668999999998 999999888888888888
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCch
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPS 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 187 (543)
++..+| +..++++|.+.|+|.|. .|...++-.+.-| .+|++-+=.. ..+.+|.++...+.-..+.+-+|
T Consensus 160 -----s~~spn---f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gw 229 (528)
T KOG0253|consen 160 -----SGASPN---FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGW 229 (528)
T ss_pred -----hcCCCC---eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhH
Confidence 888887 79999999999999998 7777777778778 5788766555 88899999998888888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcc
Q 009130 188 TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASP 267 (543)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (543)
||.++....|..+......++++.|.-.--+.+...+...+=.
T Consensus 230 r~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~k------------------------------------- 272 (528)
T KOG0253|consen 230 RYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHK------------------------------------- 272 (528)
T ss_pred HHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHH-------------------------------------
Confidence 9999988888877766666666655422111111111111100
Q ss_pred cccccccccccccCCCC-CCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhh
Q 009130 268 LRVAITADREDAMTSPK-LSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGI 346 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~ 346 (543)
-.....++.+- ...++.....++|+.+-++......++.........++.-..++-..|.++. ...+.++
T Consensus 273 ------iArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwf---gnafsyy 343 (528)
T KOG0253|consen 273 ------IARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWF---GNAFSYY 343 (528)
T ss_pred ------HHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHH---hhHHHHH
Confidence 00000000000 0000000001111111000000000000000000011111111222333333 2333333
Q ss_pred hhhhchHHHHHhh--------------------CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 347 ATMNNIAQVGESL--------------------HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 347 ~~~~~~~~~~~~~--------------------g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
+.+-......+.. ..+......-..+..+..+-|.++.+++.||+||| ..++.+
T Consensus 344 g~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK------kTMal~ 417 (528)
T KOG0253|consen 344 GSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK------KTMALS 417 (528)
T ss_pred HHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch------hHHHHH
Confidence 3322222222210 11222222334567788889999999999999654 788889
Q ss_pred HHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 407 ~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~ 485 (543)
+++.+++++++. ..+.....+..+..-++..+.+...+.+++|++|...|++..|.....+.+|+ ++.|+++ ...+.
T Consensus 418 l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIgg-I~~p~iA-~~~e~ 495 (528)
T KOG0253|consen 418 LILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGG-IFSPVIA-MRAEL 495 (528)
T ss_pred HHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhh-hhhhHHH-HHhcc
Confidence 888888877655 45555555555555566777788889999999999999999999999999999 5888777 44444
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 009130 486 VASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRF 528 (543)
Q Consensus 486 ~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 528 (543)
.- + .+..+...+++++.+...++..|+|.+
T Consensus 496 s~------------s-l~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 496 ST------------S-LPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred ce------------e-ehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 32 2 455677777888888888888887764
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=2.5e-21 Score=206.60 Aligned_cols=292 Identities=13% Similarity=0.024 Sum_probs=187.7
Q ss_pred cccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVW 110 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~ 110 (543)
.+...+.++++|+++..+.+++.+.+.+++. ..++.|++.||+| ||+.+.+|.+++++|.++++
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~---------------r~~~i~~g~ll~~lg~ll~a 116 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLH---------------RPIVIGIGCAIMGLGSFLLS 116 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccC---------------cceEEEecHHHHHHHHHHHh
Confidence 4567799999999999999988888888886 6789999999998 99999999999999999954
Q ss_pred HHH--hc--------------------c---C-----------------C--CCChHHHHHHHHHHHhcCcchhhhhHHH
Q 009130 111 ASV--VG--------------------L---L-----------------P--RPVPVPLMCLFIFTAAHAQNFFNTGNIV 146 (543)
Q Consensus 111 ~~~--~~--------------------~---~-----------------~--~~~~~~~~~~~r~l~G~g~g~~~~~~~~ 146 (543)
+.- .+ . . . +. .+..+++.|+++|+|.+..++....
T Consensus 117 lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 117 LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESL-MWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCc-eehhhHHHHHHHhccCCcchhcCch
Confidence 421 00 0 0 0 10 2456778999999999999999999
Q ss_pred HHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHhheeccC-CCCcccchh--
Q 009130 147 TGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN-PSTYILVLALLPTLVSLLFMSHVRIYG-TNSVDDKKH-- 221 (543)
Q Consensus 147 ~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 221 (543)
++.||+| ++|++++|+...+..+|+++++.+++.+.+.. .|+. ....+ .-.+++.+|
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~------------------~~~~~~~l~~~dprWiG 257 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGS------------------VNTEDVILTPTDPRWIG 257 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccc------------------CCCCCCCCCCCCccHHH
Confidence 9999998 68999999999999999999998888764311 0000 00000 000011111
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccC
Q 009130 222 --LNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELA 299 (543)
Q Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (543)
+..|.+.+ ++.++..+++....++.|++.+. ++.+..+.+. .+
T Consensus 258 aWwl~Fli~g-----------------------------~l~~l~~v~l~~~p~~lp~~~~~-~~~~~~~~~~-~~---- 302 (633)
T TIGR00805 258 AWWIGFLICG-----------------------------GVALLTSIPFFFFPKALPKEGKR-VNVDVHETEK-LE---- 302 (633)
T ss_pred HHHHHHHHHH-----------------------------HHHHHHHHHHHhCccccCCcccc-cchhhhhhhc-cc----
Confidence 11111111 11111111111111111111000 0000000000 00
Q ss_pred CCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHH-HH
Q 009130 300 DDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSI-WN 377 (543)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i-~~ 377 (543)
+.+++.. .......++.....+++++||.++...+..++.....+.+..++|.++++ +|+++.+++.+.++..+ +.
T Consensus 303 ~~~~~~~--~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~ 380 (633)
T TIGR00805 303 KSEDKSR--KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAA 380 (633)
T ss_pred ccccccc--hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHH
Confidence 0000000 00000111122446788999999999999988888888899999999975 69999999999988776 56
Q ss_pred hhhccccccchhhhhhh
Q 009130 378 FFGRFGAGYGSDVFLHK 394 (543)
Q Consensus 378 ~ig~~~~G~lsD~~~~~ 394 (543)
++|.+++|+++||++.+
T Consensus 381 ~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 381 GLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHhhhhheeeeeccc
Confidence 79999999999999754
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=8.2e-20 Score=185.94 Aligned_cols=365 Identities=11% Similarity=-0.041 Sum_probs=227.5
Q ss_pred HHHcCCccc-cccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHH
Q 009130 23 QCSVGTTYT-FSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAIL 101 (543)
Q Consensus 23 ~~~~g~~~~-~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~ 101 (543)
.+..|..+. ...+.|.+.+|.|.+.++++.++.. .+.....++++++.||+. .||+|+||..++...+
T Consensus 10 y~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~-~l~~~~~~l~~p~~~~~~----------~~~~g~r~~~i~~~~~ 78 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLV-GLPWVVKFLWAPLVDNWW----------SWRLGRRRSWVLPMQC 78 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHhccc----------cccCCcchhHHHHHHH
Confidence 344555543 3456788888999999999966322 233445667777777753 4667788887665533
Q ss_pred HHH-HHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHH
Q 009130 102 CFT-GYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYK 179 (543)
Q Consensus 102 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 179 (543)
... ....++ ......+. ...++..-.+.++..+...+..-....++.+ ++++...+....+..+|.++++.+..
T Consensus 79 ~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~ 154 (390)
T TIGR02718 79 LVSACLASLA--LVGPDVAG--AGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTL 154 (390)
T ss_pred HHHHHHHHHH--cCCcchhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 122211 01122221 2333334444555666666666667778887 45688888888888899999988777
Q ss_pred HhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHH
Q 009130 180 TVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFII 259 (543)
Q Consensus 180 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (543)
.+.+..+|+..+....+...+..+...+
T Consensus 155 ~l~~~~gw~~~f~~~a~l~~~~~~~~~~---------------------------------------------------- 182 (390)
T TIGR02718 155 VLFGKFGQRPAFLLVACVPLASLVCVLW---------------------------------------------------- 182 (390)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHH----------------------------------------------------
Confidence 7776666776555444322221111000
Q ss_pred HHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHH
Q 009130 260 LLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATL 339 (543)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~ 339 (543)
.++++++++ + ++ +.+..+.++.+|+|.+|...+..+
T Consensus 183 ------------~~~~~~~~~------------------~----------~~----~~~~~~~~~~l~~~~~~~~~~~~~ 218 (390)
T TIGR02718 183 ------------LKDRAVASP------------------E----------AP----LARRASLFRFFRRPLAWSLLALAL 218 (390)
T ss_pred ------------cCCCCcCcc------------------c----------cc----hhhHHHHHHHHcCcCHHHHHHHHH
Confidence 001100000 0 00 001123567888998887777766
Q ss_pred hhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHH-HHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH-HHHH
Q 009130 340 CGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSI-WNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG-HIAI 417 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i-~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~-~~~~ 417 (543)
+..........+.+.+.+|.|+++++.+.......+ ...++.++.|++.||+++| +.+..+.+...+. ...+
T Consensus 219 l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~------~~l~~~~~~~~~~~~~~~ 292 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW------RTFILGVGLAGSLALLWF 292 (390)
T ss_pred HHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH------HHHHHHHHHHHHHHHHHH
Confidence 665555556667788888999999999999888764 6667899999999999754 3444444433222 2211
Q ss_pred h--h----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCC-cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC
Q 009130 418 A--S----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGV-RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE 490 (543)
Q Consensus 418 ~--~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~ 490 (543)
. . .+....+...++.+++.+..++...+.+.+..++ +++++.+++.+....+|. .++|.+.|.+.|..|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~-~~g~~~~G~l~~~~G--- 368 (390)
T TIGR02718 293 AQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE-LIASSIAGYLTDRFG--- 368 (390)
T ss_pred HHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHc---
Confidence 1 1 1111223333344566677767777777777776 789999999999999998 489999999999887
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHH
Q 009130 491 DHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 491 ~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
|+..|++.+++.+++.++
T Consensus 369 ---------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 369 ---------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred ---------cHHHHHHHHHHHHHHHHH
Confidence 888888877766665443
No 91
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=1.7e-21 Score=184.84 Aligned_cols=344 Identities=14% Similarity=0.103 Sum_probs=235.1
Q ss_pred hhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 009130 41 STQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPR 119 (543)
Q Consensus 41 ~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 119 (543)
++.+-+++++|++.....+.. ...++.|.+.||+| +|..+++|..++...+++ .++..+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iG---------------y~ipm~~Gl~vmf~sTil-----Fafg~s 158 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIG---------------YKIPMVAGLFVMFLSTIL-----FAFGNS 158 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhc---------------cccHHHHHHHHHHHHHHH-----HHHcch
Confidence 456778888996655555555 48999999999999 999999999999999999 445554
Q ss_pred CChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCC--CCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHH
Q 009130 120 PVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGH--YSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLP 197 (543)
Q Consensus 120 ~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 197 (543)
++.+++.|.+||+|.++..++..++++|.||+ +||+++|+..++.++|-.++|++++.+.+.-+-...|++..+.
T Consensus 159 ---y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v 235 (464)
T KOG3764|consen 159 ---YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIV 235 (464)
T ss_pred ---hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHH
Confidence 89999999999999999999999999999983 5899999999999999999999998875432222222211111
Q ss_pred HHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccc
Q 009130 198 TLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADRE 277 (543)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (543)
.++- ..+.+.. . ++.+
T Consensus 236 ~Lld------------------------------------------------------------~~L~l~v---i-~p~~ 251 (464)
T KOG3764|consen 236 LLLD------------------------------------------------------------GALQLLV---I-EPTE 251 (464)
T ss_pred HHHH------------------------------------------------------------HHHHHhe---e-Cccc
Confidence 1110 0011110 0 1111
Q ss_pred cccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHH
Q 009130 278 DAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE 357 (543)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~ 357 (543)
+.+ + ...+....++++++|..+................-..++.+..
T Consensus 252 ~~~------------------------------~---~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~ 298 (464)
T KOG3764|consen 252 MDP------------------------------D---STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWML 298 (464)
T ss_pred cCc------------------------------c---ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHH
Confidence 000 0 0112244588899999888777665555444445566666554
Q ss_pred h-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhh
Q 009130 358 S-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVC 435 (543)
Q Consensus 358 ~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~ 435 (543)
+ ...+.-+.+..+....+...+|..++|.+.||+++. |....+.+++...+.+.... .++...+++-.+..+++
T Consensus 299 e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~----~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~ 374 (464)
T KOG3764|consen 299 ETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL----RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFG 374 (464)
T ss_pred HhccCCCcceeeeecccccchhccCchHHHHHHhcCch----hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHH
Confidence 4 453334888888899999999999999999999752 32223333333333332222 34444566666666666
Q ss_pred hhhhhhhHHHHHHhhcCCc------chhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHH
Q 009130 436 YGSQWSLMPTITSEIFGVR------HMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAF 509 (543)
Q Consensus 436 ~g~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~ 509 (543)
.+.+-+........+...+ .+|.++++...+..+|-. +||.++|.+.+..| |+|...+.++
T Consensus 375 i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a-~GP~~gg~iv~~iG------------F~wl~~iig~ 441 (464)
T KOG3764|consen 375 IGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA-IGPTFGGSLVEAIG------------FEWLMTIIGI 441 (464)
T ss_pred HHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh-ccccccchheeehh------------HHHHHHHHHH
Confidence 6665544444444444332 578999999999999984 89999999999998 9998888888
Q ss_pred HHHHHHHHHHHH
Q 009130 510 VAFFGSLVAFLL 521 (543)
Q Consensus 510 ~~~~~~i~~~~~ 521 (543)
..++-.-+..++
T Consensus 442 ~n~iyapvl~ll 453 (464)
T KOG3764|consen 442 LNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHH
Confidence 777765554443
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.86 E-value=2.2e-19 Score=187.48 Aligned_cols=408 Identities=11% Similarity=0.008 Sum_probs=235.2
Q ss_pred cccHHHHhhcCCChhhHHHHHHHhhhc-ccccchhhHhhhh-cccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 34 IYSSTLKSTQNYDQSTLERVAVFKDMG-GSAGILSGLLFSY-VTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 34 ~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~d~-~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
.+..++++++|+++++.+++...+... +...++.|+++|| +| ||+++..+.+++++++.+
T Consensus 43 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G---------------~r~~~~~g~~~~~ig~~l--- 104 (500)
T PRK09584 43 IMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLG---------------TKRVIMLGAIVLAIGYAL--- 104 (500)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------hHHHHHHHHHHHHHHHHH---
Confidence 455677899999999988554444333 3345689999999 58 999999999999999888
Q ss_pred HHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCC-C--CcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 112 SVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGH-Y--SGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~-~--rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
++++++. .+.+.+.|+++|+|.|...+....+++++||+ + |+.++++...+.++|.+++|.+.+++.+..+|+
T Consensus 105 --~~~~~~~--~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~ 180 (500)
T PRK09584 105 --VAWSGHD--AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred --HHHhccc--HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 5555432 56677889999999999888888899999974 2 456789999999999999999999998888899
Q ss_pred HHHHHHHHHHHHHHHHHhheec-cCCC---Cccc-chhhhh-HHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 009130 189 YILVLALLPTLVSLLFMSHVRI-YGTN---SVDD-KKHLNA-FSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLL 262 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (543)
+.+..+.+...++++...+.+. .+++ ++.+ .+.... ....++....+.... ...+. + ..........+.
T Consensus 181 ~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~ 255 (500)
T PRK09584 181 VAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATW-LLHNQ-E---IARMALGVVALG 255 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHH-HHhcc-h---HHHHHHHHHHHH
Confidence 9888877665655444333222 2211 1111 111111 111111111111100 00010 0 000000000000
Q ss_pred HhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhh
Q 009130 263 LLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGM 342 (543)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~ 342 (543)
.... ..++. .+.+ +.-+++. +..... ++..
T Consensus 256 ~~~~----~~~~~------------------------------------~~~~--------~~~~~~~-~~~~~~-~~~~ 285 (500)
T PRK09584 256 IVVI----FGKEA------------------------------------FAMK--------GAARRKM-IVAFIL-MLEA 285 (500)
T ss_pred HHHH----HHHHH------------------------------------hhcC--------HHHHHHH-HHHHHH-HHHH
Confidence 0000 00000 0000 0001111 111111 1111
Q ss_pred chhhhhhhchHHHHHh---hCCCc------hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 343 GSGIATMNNIAQVGES---LHYST------TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~---~g~s~------~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
..++......+..+.. .+.+. ...+++.++..+...+..++.+++-+|.++|. +....+.++.++..++
T Consensus 286 i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~--~~~~~~~~G~~l~~l~ 363 (500)
T PRK09584 286 IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL--PMPHKFAIGMVLCSGA 363 (500)
T ss_pred HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC--CcHHHHHHHHHHHHHH
Confidence 2222333333433322 11111 23556666777676677777666666665553 3445667777777777
Q ss_pred HHHHhh--c--------CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhh
Q 009130 414 HIAIAS--G--------FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIY 483 (543)
Q Consensus 414 ~~~~~~--~--------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~ 483 (543)
++.+.. . +..+.....++.|++.+...+....++.+..|++.+|...|+..+...+|+. ++..+.+...
T Consensus 364 f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~-~~g~~~~~~~ 442 (500)
T PRK09584 364 FLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAL-IAGYVANLMA 442 (500)
T ss_pred HHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 766431 1 1235667788899999999999999999999999999999999888888875 3333333221
Q ss_pred hhccCCCCcccc--ccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 484 DRVASGEDHTCY--GTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 484 ~~~g~~~~~~~~--~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
. ++..... ...+|...|...++.+++..++.+.+.++.
T Consensus 443 ~----~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~ 482 (500)
T PRK09584 443 V----PDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKL 482 (500)
T ss_pred c----ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0000000 112377888888877766555555544433
No 93
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.2e-20 Score=182.17 Aligned_cols=429 Identities=13% Similarity=0.021 Sum_probs=255.9
Q ss_pred chhhHHHHHHHHHHHHHcC-CccccccccHHHHhhc-C-------CChhhHHHHHHHhhhccc-ccchhhHhhhhccccc
Q 009130 9 TNSKWIATVASIWIQCSVG-TTYTFSIYSSTLKSTQ-N-------YDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNH 78 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~-~-------~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~ 78 (543)
+++....+..+.+-.+..+ ..++.+...|.+...+ + ++..-.+.+.....+|.+ .|++.|++.||+|
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~G--- 112 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFG--- 112 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc---
Confidence 3444444443333333343 3567777777665543 2 334444578888888887 6889999999999
Q ss_pred ccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCc
Q 009130 79 HHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSG 157 (543)
Q Consensus 79 ~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg 157 (543)
||++....++++.+++++.++..+--.++ .-++.++++|++.|+|.|.-||.+..+.+|.-. ++||
T Consensus 113 ------------RK~vYG~~liImIi~t~~~~~s~~~~~~~-~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RG 179 (538)
T KOG0252|consen 113 ------------RKKVYGKELIIMIICSALSGLSVGTTSPL-GVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRG 179 (538)
T ss_pred ------------chhhhhHHHHHHHHHHHHhccCCCCCCCc-chhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcccc
Confidence 99999999999999998733322111221 136678889999999999999999999999887 6799
Q ss_pred chhHHHHHhhhhhHHHHHHHHHHhc---C----C--------CchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhh
Q 009130 158 TIVGILKGFVGLSGAVLTQVYKTVC---N----G--------NPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHL 222 (543)
Q Consensus 158 ~~~gi~~~~~~lg~~i~~~l~~~l~---~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (543)
.-.+.+.+..++|...+.+++..+. + . .-||..+.++++|.++.+.. .+ ..|+.+ + +
T Consensus 180 a~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~--Rl-~M~Et~----~-Y 251 (538)
T KOG0252|consen 180 AFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF--RL-KMPETA----R-Y 251 (538)
T ss_pred ceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh--hh-cCCcch----h-H
Confidence 9999999999999888876654432 1 0 12555555555554442211 11 011100 0 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCc
Q 009130 223 NAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDE 302 (543)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (543)
.+ + ...+++... ++.++.... .. +
T Consensus 252 ~a---l-------------------------------------------~~~~~~~a~--~d~~k~~~~-~~-------~ 275 (538)
T KOG0252|consen 252 TA---L-------------------------------------------VSKKLKQAA--GDMKKVLSV-DI-------E 275 (538)
T ss_pred HH---H-------------------------------------------hhcCHhhhh--hcccccccc-cc-------c
Confidence 00 0 000000000 000000000 00 0
Q ss_pred cchhcccccccchhhcchhHHHhhc---chhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHH--------HHH
Q 009130 303 SKVTAAFDDKILKDEEDMNLLQAMC---TGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINS--------LIS 371 (543)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~--------~~~ 371 (543)
++++.......+++.... +.+.+. -+.....+...|..-.+.+....+...+++..|+.+.+... ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~-F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGL-FSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccch-HHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHH
Confidence 000000011111111111 111111 13344555666666667777777778888877776554433 223
Q ss_pred HHHHHHhh-hccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-C-c---ch-HHHHHHHHHhhhhhhhhhHH
Q 009130 372 LWSIWNFF-GRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG-F-P---GN-LFVGTMIVGVCYGSQWSLMP 444 (543)
Q Consensus 372 ~~~i~~~i-g~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~-~-~---~~-~~~~~~l~G~~~g~~~~~~~ 444 (543)
+..+++.+ |-.+...++|++|| ++..+.+.+++.+..+.++.+ + . .. .....+..-++.-+......
T Consensus 355 iia~~~~vPGyw~tv~~id~iGR------k~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttf 428 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGR------KYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTF 428 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhh------HHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeE
Confidence 44444444 77888999999965 488888999988888777632 2 1 11 12222222233333334455
Q ss_pred HHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 445 TITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 445 ~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.+.+|.||.+.|++.+|+....+=+|+ +++...++.+.+.. .+..-+++++|++.+++++++.+..+++. |
T Consensus 429 ivpaE~FParvR~t~hGIsAA~GK~GA-ivg~~~F~~~t~~~-------yp~~~g~~~v~~i~~~~~~~gi~~T~l~p-E 499 (538)
T KOG0252|consen 429 IVPAEIFPARVRSTCHGISAASGKAGA-IVGAFGFLYLTDHN-------YPPNIGVRNVFIILAGCMLLGILFTLLIP-E 499 (538)
T ss_pred EeehhhchHHHhhhhhhHHHHhccchH-HHHHHHhhHhhhcc-------CCccccchHHHHHHHHHHHHhHheeEEee-c
Confidence 677899999999999999998888888 47776666666621 00112489999999999999998887776 8
Q ss_pred chhhhHHHH
Q 009130 525 TRRFYNQVV 533 (543)
Q Consensus 525 ~~~~~~~~~ 533 (543)
++++..++.
T Consensus 500 tk~~~leei 508 (538)
T KOG0252|consen 500 TKGKSLEEI 508 (538)
T ss_pred ccccCHHHh
Confidence 877766544
No 94
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=1.6e-19 Score=187.17 Aligned_cols=356 Identities=10% Similarity=0.006 Sum_probs=240.5
Q ss_pred HHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhc
Q 009130 37 STLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVG 115 (543)
Q Consensus 37 ~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~ 115 (543)
+.+..+..-|+...+++..+..+... +++++|.++||++ ||++++.+-++.++..+.+++....
T Consensus 34 ~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~d---------------rrrili~~~~~~~~~~~~L~~l~~~ 98 (524)
T PF05977_consen 34 AWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFD---------------RRRILILSQLLRALVALLLAVLAFF 98 (524)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------------chHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555666678888887777777775 8999999999999 9999999988877766665443222
Q ss_pred cCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHH
Q 009130 116 LLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLA 194 (543)
Q Consensus 116 ~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~ 194 (543)
-.. +.+.+++.-++.|++.+...|.-.+++.+..| ++...+.++.....+++.++||.+++.++...+-.+.+.+.
T Consensus 99 ~~~---~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~in 175 (524)
T PF05977_consen 99 GLL---SPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLIN 175 (524)
T ss_pred CcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 222 37889999999999999999999999999999 57889999999999999999988888764221111111111
Q ss_pred HHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccccccc
Q 009130 195 LLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITA 274 (543)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (543)
.+..++. +..+ ...++
T Consensus 176 alsfl~~-------------------------------------------------------------i~~l---~~~~~ 191 (524)
T PF05977_consen 176 ALSFLIS-------------------------------------------------------------ILAL---LRWKP 191 (524)
T ss_pred HHHHHHH-------------------------------------------------------------HHHH---HHccc
Confidence 1111000 0000 01111
Q ss_pred ccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHH
Q 009130 275 DREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQ 354 (543)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~ 354 (543)
+.++.+ . .++...+......+-..++|......+..++.......+...+|.
T Consensus 192 ~~~~~~------------------~----------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl 243 (524)
T PF05977_consen 192 PPPPSS------------------L----------PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPL 243 (524)
T ss_pred cccccc------------------c----------chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhH
Confidence 100000 0 000001112233444455666554444333332223334445677
Q ss_pred HHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHH
Q 009130 355 VGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFVGTMIV 432 (543)
Q Consensus 355 ~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~l~ 432 (543)
+.++ +|.++...|++.+..+++.++|.++.+++.+|+. +..++..+.+..+++++.++. ++.+...+..++.
T Consensus 244 ~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~------~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 244 FARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLS------SRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccC------cchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 7754 6999999999999999999999999888877763 334566667777777666663 4455556677788
Q ss_pred HhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHH
Q 009130 433 GVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAF 512 (543)
Q Consensus 433 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~ 512 (543)
|++.....+...+.+.+..|++.+|.+.++..+....+. .+|..+.|.+.|..| .+.++.+.++..+
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~-~lGsll~G~la~~~g------------~~~al~~a~~~ll 384 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGM-PLGSLLWGFLADHFG------------VRTALLIAGAALL 384 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC------------HHHHHHHHHHHHH
Confidence 888888888888889999999999999999987776665 478889999999987 7778777776666
Q ss_pred HHHHHHHHH
Q 009130 513 FGSLVAFLL 521 (543)
Q Consensus 513 ~~~i~~~~~ 521 (543)
++.++....
T Consensus 385 l~~~~~~~~ 393 (524)
T PF05977_consen 385 LSALIALRF 393 (524)
T ss_pred HHHHHHHHh
Confidence 666555443
No 95
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.4e-21 Score=173.97 Aligned_cols=369 Identities=14% Similarity=0.084 Sum_probs=237.4
Q ss_pred hhhHHHHHHHHHHHHHcCCc--cc-cccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccc
Q 009130 10 NSKWIATVASIWIQCSVGTT--YT-FSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~~g~~--~~-~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
.+|.++++..++ +-.|+. |. -+.+..+.++|.+++.++..++-+.+....+ ...+.|++.||.
T Consensus 40 ~hr~m~lv~mc~--lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~----------- 106 (459)
T KOG4686|consen 40 GHRFMALVFMCL--LGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRR----------- 106 (459)
T ss_pred hhHHHHHHHHHH--hcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhh-----------
Confidence 345665543222 224443 33 3467778888899998888877777777776 677999999984
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
+|.|+...+=+++..+|.+.++ ++-..+ ++|.+.++|++.|+|.-.....-+++...||. |+.+.++|+..
T Consensus 107 ---fgir~gtii~~~fv~~GqliFa---~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlql 178 (459)
T KOG4686|consen 107 ---FGIRLGTIILCIFVFLGQLIFA---AGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQL 178 (459)
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHH---hchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHH
Confidence 3688877777777788888865 444444 49999999999999988777888889999997 88999999998
Q ss_pred HhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHH--HHHHHHHHHH
Q 009130 165 GFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTL--AAYFMVITVM 242 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (543)
...-+|+.+--.+.+++.+. +-. ..|. ..-..+|+.+ ....+...
T Consensus 179 SvAR~GstvNf~lm~~ly~~-------~~~---------------~~~~---------~ghT~LG~~l~~~~~tc~~s-- 225 (459)
T KOG4686|consen 179 SVARLGSTVNFLLMPFLYDT-------MGR---------------MFPG---------VGHTLLGLWLCFEVKTCKQS-- 225 (459)
T ss_pred HHHHhhceeeeeecHHHHHH-------HHH---------------hccc---------chHHHHHHHHHHHHHHHHHH--
Confidence 88888876543333322110 000 0000 0000111000 00000000
Q ss_pred hhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhH
Q 009130 243 ENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNL 322 (543)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (543)
....+. .. +.++..++.. + .|+... .++++ .
T Consensus 226 ----------------lical~---lg--~~D~rAeril--h-----------~e~g~~---------Ge~pk------L 256 (459)
T KOG4686|consen 226 ----------------LICALS---LG--LSDDRAERIL--H-----------LEEGFL---------GEEPK------L 256 (459)
T ss_pred ----------------HHHHHH---hh--hhhhHHHHHH--h-----------hhcCcc---------cCCcc------c
Confidence 000000 00 0011111110 0 000000 00000 0
Q ss_pred HHhh-cchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCch
Q 009130 323 LQAM-CTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARP 400 (543)
Q Consensus 323 ~~~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~ 400 (543)
.+.. -.|.||.+.+..++.....+.++..-|.++++ .|+|+..++.+.+.......+.++++|.++||.|++.
T Consensus 257 tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~----- 331 (459)
T KOG4686|consen 257 TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL----- 331 (459)
T ss_pred ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----
Confidence 0000 25789999888888777777777777777766 5999999999999888889999999999999998652
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhh
Q 009130 401 IFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIG 480 (543)
Q Consensus 401 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g 480 (543)
+.+..+.+....+...+.+ +....+..+.+.|+.+.........+++.+.|+++.|+++|.+....++|-. +-|++.|
T Consensus 332 ~wv~~a~~~tl~~H~~l~F-t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla-~i~Iiag 409 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFF-TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLA-FIPIIAG 409 (459)
T ss_pred hhHHHHHHHHHHHhhhHHh-hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhh-HHhhhhh
Confidence 3333344444444443332 2233467788999998887777888899999999999999999999999975 6789999
Q ss_pred hhhhhccC
Q 009130 481 RIYDRVAS 488 (543)
Q Consensus 481 ~l~~~~g~ 488 (543)
.+.|..|+
T Consensus 410 ~i~d~~g~ 417 (459)
T KOG4686|consen 410 FIADGDGS 417 (459)
T ss_pred eeecCCCc
Confidence 99998773
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=5.4e-20 Score=182.34 Aligned_cols=352 Identities=8% Similarity=-0.085 Sum_probs=221.3
Q ss_pred ccccccccHHHHhhcCCChhh-HHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQST-LERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGY 106 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~-~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~ 106 (543)
.-+.+...|++.+|+|+|+.| .+.+.+.+..++. ..+|.|.++||+| .|+++.++.+.+.+.+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG---------------~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLR---------------YKPVLVLQALSFVCVW 106 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC---------------chHHHHHHHHHHHHHH
Confidence 456788889999999999999 8888888888886 7889999999999 9999999999999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC
Q 009130 107 FLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN 185 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~ 185 (543)
++ .+++++ +..+.+.|++.|+++|..+ +...++.+||| ++|++++|+..++..+|.++++++++. ....
T Consensus 107 ~L-----~~fa~S---l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~ 176 (511)
T TIGR00806 107 LL-----LLLGTS---VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL 176 (511)
T ss_pred HH-----HHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 99 666665 7999999999999999999 89999999999 689999999999999999999999998 4455
Q ss_pred chhHHHHHHHH---HHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 009130 186 PSTYILVLALL---PTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLL 262 (543)
Q Consensus 186 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (543)
+|++...+..+ ..+++++..++++.++++ .
T Consensus 177 gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~s---------l-------------------------------------- 209 (511)
T TIGR00806 177 GWISYSTLNIISLVFMTFSVFLALFLKRPKRS---------L-------------------------------------- 209 (511)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhCCCCchh---------h--------------------------------------
Confidence 67766655443 333333333333322110 0
Q ss_pred HhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhh
Q 009130 263 LLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGM 342 (543)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~ 342 (543)
.++++++.+ +....+.+...++++ .++.+... ......-+.-..+.++..+|+......+...+..
T Consensus 210 --------~f~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 210 --------FFNRLEDVR----GALPCELDQMVPGPG-GKLEDYLG-TCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred --------hhccccccc----cccccccccCCCCCc-cccchhhh-hhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 000000000 000000000000000 00000000 0000000111233455566776554444444444
Q ss_pred chhhhhhhchHHHHHhhCC-CchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc
Q 009130 343 GSGIATMNNIAQVGESLHY-STTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SG 420 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~g~-s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~ 420 (543)
.+++-+.++...+.++..- .+.-.|..-++..+.+++..+..|++-.+..+. + ...+.+..++....++++. .+
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~---~-~l~l~v~s~~~~gll~~m~~t~ 351 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW---S-KLLIAVVSAIQAGLVFWMSQSH 351 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh---H-HHHHHHHHHHHHHHhhhhhccc
Confidence 4444445444444444311 112455566677777788888888885544211 1 1233333333333344444 45
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhh
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVG 470 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig 470 (543)
+.+..++.-++++..+....++...-++.....+.+|..+|+-+....+-
T Consensus 352 ~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~L 401 (511)
T TIGR00806 352 DIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATAL 401 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHH
Confidence 66677888888888888877777777888888888899999875544333
No 97
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=3.5e-19 Score=187.33 Aligned_cols=386 Identities=12% Similarity=0.045 Sum_probs=248.4
Q ss_pred hHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHH
Q 009130 49 TLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMC 127 (543)
Q Consensus 49 ~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 127 (543)
+.+++.+...++.. .+++.|+++|++| ||++++++.+++.+|.++ ++++++ +..++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~G---------------Rk~~l~~~~~~~~iG~ii-----~~~a~~---~~~l~ 146 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIG---------------RKKTLLLAVVLFLIGAII-----IALAPS---WYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------hHHHHHHHHHHHHHHHHH-----HHHhhh---HHHHH
Confidence 45788888888886 7889999999999 999999999999999999 777887 89999
Q ss_pred HHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCC--CchhHHHHHHHHHHHHHHHH
Q 009130 128 LFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNG--NPSTYILVLALLPTLVSLLF 204 (543)
Q Consensus 128 ~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~ 204 (543)
++|+++|+|.|....+...+++|.-| +.||...+.......+|..++ .+.+...++ .+||..+.+..+|.++..++
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 579999999999999887777 555555544 37999999999998888887
Q ss_pred HhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCC
Q 009130 205 MSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPK 284 (543)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (543)
+.++++.|..-.+..+...+...+. ... ...+++.
T Consensus 226 ~~~~pesp~~L~~~g~~~~a~~~l~--------------~l~---------------------------g~~~~~~---- 260 (513)
T KOG0254|consen 226 MLFLPESPRWLIEKGRLEEAKRSLK--------------RLR---------------------------GLSPEDV---- 260 (513)
T ss_pred HHhCCCChHHHHHcCChHHHHHHHH--------------HHh---------------------------CCCCcch----
Confidence 6666654431101000000000000 000 0000000
Q ss_pred CCCCCCCCCCccccCCCccchhcccccccchhhcchhHH----HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhC
Q 009130 285 LSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLL----QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLH 360 (543)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 360 (543)
+...++.+ .....+....+ .+.... +..+++.++...+..+..........++.+++++..|
T Consensus 261 ------~~~~~~~~------~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g 326 (513)
T KOG0254|consen 261 ------EVELELLK------IKLLVEAEVAE--GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG 326 (513)
T ss_pred ------HHHHHHHH------HHHHHhhhccc--ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC
Confidence 00000000 00000000000 000111 1233445555666666666555667888889988888
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-----cC----c----chHHH
Q 009130 361 YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-----GF----P----GNLFV 427 (543)
Q Consensus 361 ~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-----~~----~----~~~~~ 427 (543)
.+... .....+.++.+.++..+..++.||+|| +++++.+...+.+++++++. .. . ...++
T Consensus 327 ~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gR------r~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
T KOG0254|consen 327 LKSDT-FLASIILGVVNFLGTLVATYLVDRFGR------RKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV 399 (513)
T ss_pred CCCch-HHHHHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence 87544 455567777788888888999999954 47888888888888776541 11 1 11122
Q ss_pred HHHHHHhhhhhh-hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 428 GTMIVGVCYGSQ-WSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 428 ~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
..++.-..++.. .++...+.+|.+|.+.|+++.++....+.....++. ..+..+.+..+ ....|..
T Consensus 400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~-~~~~~~~~~~~------------~~~~f~~ 466 (513)
T KOG0254|consen 400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS-FFFPFITEALG------------IGGTFGY 466 (513)
T ss_pred HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH-HHHHHHHHhcc------------ccchHHH
Confidence 222222222222 234446789999999999999999888888776542 23333333321 1355666
Q ss_pred HHHHHHHHHH-HHHHHhhcchhhhHHHHHHhh
Q 009130 507 MAFVAFFGSL-VAFLLFLRTRRFYNQVVIRRL 537 (543)
Q Consensus 507 ~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~ 537 (543)
..+.+.+..+ ..++..+|+|.+..++.+++.
T Consensus 467 f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 467 FGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred HHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 6666666666 677778899888777655543
No 98
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=6e-20 Score=177.80 Aligned_cols=411 Identities=13% Similarity=0.074 Sum_probs=266.0
Q ss_pred ccchhhHHHHHHHHHHHHHcCC-ccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccc
Q 009130 7 LSTNSKWIATVASIWIQCSVGT-TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTR 84 (543)
Q Consensus 7 ~~~~~~w~~~~~~~~~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~ 84 (543)
+..++||.++++..++.++.+. --.|+....+....++ +..-..|++..+++.++ .++++-++.||+|
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~G--------- 107 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFG--------- 107 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccc---------
Confidence 5788999999999988888764 4568888888888899 44444488888877776 7889999999998
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHH--HHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhH
Q 009130 85 TRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVP--LMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVG 161 (543)
Q Consensus 85 ~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~g 161 (543)
-|.+..++..+..+|..+=.++..-+.++ .++ ....+..+.+.++-.....+..+.+-||| ++|..|..
T Consensus 108 ------LR~a~llgt~ln~iGa~Ir~iss~p~v~~--~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~ 179 (480)
T KOG2563|consen 108 ------LRTALLLGTVLNGIGAWIRLISSLPFVPP--LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATV 179 (480)
T ss_pred ------hHHHHHHHHHHHHHHHHHhhhccCccccc--cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhh
Confidence 99999999999999999944322222223 244 55667788888888777777788899997 79999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHH
Q 009130 162 ILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITV 241 (543)
Q Consensus 162 i~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (543)
+-..++.+|.+++..+...++.+. + +.++..+.+..+-....
T Consensus 180 ~~v~~n~LGvavg~llppilV~~~--------------------------~----~~~~~~~~~~~~f~~~~-------- 221 (480)
T KOG2563|consen 180 LGVMGNPLGVAVGFLLPPILVPSS--------------------------K----DSEDNSWLFFTLFLGVE-------- 221 (480)
T ss_pred HHHhcchHHHHHHhhccceecCCC--------------------------C----CcchhHHHHHHHHHHHH--------
Confidence 999999999999865554443211 0 11111111110000000
Q ss_pred HhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchh
Q 009130 242 MENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMN 321 (543)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (543)
.+.++.........+++|+-+. +. . ++.+.+.+...+
T Consensus 222 -----------------~l~~l~l~l~~~~~~~~P~tPp---s~------------------s-----~~~~~~~~f~~s 258 (480)
T KOG2563|consen 222 -----------------CLAALLLALVLFVFTKKPPTPP---SA------------------S-----QAALQDASFPKS 258 (480)
T ss_pred -----------------HHHHHHHHHHHHhcCCCCCCCC---ch------------------h-----HhhhhcCcHHHH
Confidence 0000000000011111111100 00 0 000001224467
Q ss_pred HHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH
Q 009130 322 LLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI 401 (543)
Q Consensus 322 ~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~ 401 (543)
.++.++|++|....+++.+..+.+++....+-..+...|++...+|....+..+++++|.++.|.+.||.++. +.
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f-----k~ 333 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF-----KL 333 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH-----HH
Confidence 7889999999999999888777666655555444555699989999999999999999999999999998543 23
Q ss_pred HHHHHHHHHHHH-HHHHh-h---cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 402 FMVITLVAMSIG-HIAIA-S---GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 402 ~~~~~~~~~~i~-~~~~~-~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
++.+......++ +.+.. . .....++....++|++..+..|+..-+-.|...|..-++..|+.++.+.+-+.++ .
T Consensus 334 ~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~-~ 412 (480)
T KOG2563|consen 334 TTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL-V 412 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH-H
Confidence 444444444433 22222 1 2234466667788888888888887788888777888889999887777666433 4
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRFYN 530 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 530 (543)
++.+...+..+. +..+...-+.+...++++.++..+++.+.||.+.
T Consensus 413 ~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 413 FIMGILAEDLGP--------PGNTFPANIFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred HHHHHHhhccCC--------CCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 566666655541 1123334455556666676776777665555444
No 99
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.82 E-value=1.4e-23 Score=217.89 Aligned_cols=380 Identities=13% Similarity=0.080 Sum_probs=238.2
Q ss_pred hhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCC---CCChH
Q 009130 48 STLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLP---RPVPV 123 (543)
Q Consensus 48 ~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~---~~~~~ 123 (543)
.+.+++.+...++.. .+++.|.++||+| ||+++.++.++..++.++ .++++ + +
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~G---------------Rk~~~~~~~~~~~i~~~~-----~~~~~~~~~---~ 102 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYG---------------RKPALIISALLMIIGSIL-----IAFAPSYNN---F 102 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccc---------------cccccccccccccccccc-----ccccccccc---c
Confidence 345677777777876 6778999999999 999999999999999999 88887 5 7
Q ss_pred HHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC---CCchhHHHHHHHHHHH
Q 009130 124 PLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN---GNPSTYILVLALLPTL 199 (543)
Q Consensus 124 ~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~---~~~~~~~~~~~~~~~~ 199 (543)
+.+++.|+++|+|.|...+....++.|..| ++||+...+...+..+|..++..+...... ++.||+.+....+|.+
T Consensus 103 ~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l 182 (451)
T PF00083_consen 103 WMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSL 182 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999998 679999999999999998888766544422 2458888888888877
Q ss_pred HHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccc
Q 009130 200 VSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDA 279 (543)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (543)
+.++...++++.|..-. .+.+.++.
T Consensus 183 ~~~~~~~~~pESP~wL~-------------------------------------------------------~~~~~~~A 207 (451)
T PF00083_consen 183 LVLLLRFFLPESPRWLL-------------------------------------------------------SKGRDEEA 207 (451)
T ss_pred cccccccccccccceec-------------------------------------------------------cccccccc
Confidence 66555555555443100 00100100
Q ss_pred cCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchh----HHHHHHHHHhhhchh-hhhhhchHH
Q 009130 280 MTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGN----FWFLCIATLCGMGSG-IATMNNIAQ 354 (543)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----f~~~~l~~~~~~~~~-~~~~~~~~~ 354 (543)
+. ..++-..++. ++++.+++.+ +.++ .++.+.+.++.++++. .........+....+ .....+.+.
T Consensus 208 ~~--~l~~~~~~~~-~~~~~~~~~~----~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 278 (451)
T PF00083_consen 208 EK--VLRKLRGKEI-EDEEIEEIKA----EKKE--SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPS 278 (451)
T ss_pred cc--cccccccccc-cccccccccc----cccc--ccccceeeeeccccccccccccccccccccccccccccccccccc
Confidence 00 0000000000 0000000000 0000 0001123344444432 222222222222222 234445566
Q ss_pred HHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh------hcC----cch
Q 009130 355 VGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA------SGF----PGN 424 (543)
Q Consensus 355 ~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~------~~~----~~~ 424 (543)
+.+..|.+.. -....+..+...++.++..++.||+||| +++..+.+.++++++.+. ..+ ...
T Consensus 279 i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 279 IFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR------KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccccccc--cccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccc
Confidence 6677777765 2233455567778888888999999765 456666655555444331 112 111
Q ss_pred HHHHHHHHHhhhh-hhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 425 LFVGTMIVGVCYG-SQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 425 ~~~~~~l~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
.++...+...+++ +..+....+++|.+|.+.|+++.|+....+.+++. +.|.+...+.+..+ ....
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~-i~~~~~~~~~~~~~------------~~~~ 417 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGF-IIPFLFPYLFNNLG------------GWGV 417 (451)
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccccc-cccccccccccccc------------cccc
Confidence 2222222222233 23345557889999999999999999988888884 67777777777654 2356
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhHHHHHH
Q 009130 504 FMIMAFVAFFGSLVAFLLFLRTRRFYNQVVIR 535 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 535 (543)
+.+.+++++++.++.+++.+|+|++..++.++
T Consensus 418 ~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 418 FLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred chhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 77777777888888888889999888766554
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.80 E-value=2.2e-17 Score=170.98 Aligned_cols=345 Identities=11% Similarity=0.026 Sum_probs=200.8
Q ss_pred ccHHHHhhcCCChhhHHHHHHHhh-hcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQSTLERVAVFKD-MGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASV 113 (543)
Q Consensus 35 ~~~~l~~~~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~ 113 (543)
+...+.+++|++..+.+.+..... ...+..++.|.++||.+ +|+|| ||+.++.+.+.+++...+..
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~----~r~Gr------rrp~il~~~~~~~i~~~l~f--- 98 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTR----TRHGQ------FRPYLLWFAIPFGVVCLLTF--- 98 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCC----CCCCC------cchhHHHHHHHHHHHHHHHH---
Confidence 456788899999999995555444 45568999999999974 45566 67778788888877776622
Q ss_pred hccCCCC---ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 114 VGLLPRP---VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 114 ~~~~~~~---~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
..++. .....+++..++.+.+..+...+-.+..+++.+ ++|.+..+....+..+|..+++.+...+..
T Consensus 99 --~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~----- 171 (444)
T PRK09669 99 --YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVD----- 171 (444)
T ss_pred --hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 22211 013445555666666666666666678888884 579888888887777777777644322210
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
..+.+ .++.++.......++ ...+.....
T Consensus 172 ---------------------~~~~~-~~~~g~~~~~~i~~i-----------------------------i~~v~~~~~ 200 (444)
T PRK09669 172 ---------------------ILGKG-DEQKGYFYAMMVMGL-----------------------------LGVVLFFCC 200 (444)
T ss_pred ---------------------HhCCC-chhhhHHHHHHHHHH-----------------------------HHHHHHHHH
Confidence 00000 001111111111110 000000000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
....|++.+ + ++ + + +++.....++.+||+.++.+.+..++........
T Consensus 201 ~~~~~e~~~--~-------------------~~--------~-~--~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~ 248 (444)
T PRK09669 201 FFMTKERYT--P-------------------EV--------D-N--SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTR 248 (444)
T ss_pred hCCeEEecC--C-------------------CC--------c-C--CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 111111100 0 00 0 0 0111234577889999988877666543333222
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH-HHh--hcCcchH
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHI-AIA--SGFPGNL 425 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~-~~~--~~~~~~~ 425 (543)
.....++.+..--+++..+.+.....+..+++.+++++++||+++| ..+..+.+..++..+ ++. ..+...+
T Consensus 249 ~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (444)
T PRK09669 249 GGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV------RAFKWTIVAFVILSALIFFIPPSNVWLI 322 (444)
T ss_pred hhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH------HHHHHHHHHHHHHHHHHHHhCcchHHHH
Confidence 2222333233221233344455566677888999999999999654 444444444333222 222 2233445
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
++..++.|++.+...+..+++++|..+ ++..|..+|..+....+|.. +++.+.|.+.|..|-.
T Consensus 323 ~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~a-lg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 323 FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLA-IGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCC
Confidence 666778899999988888999988874 34457788888888888874 8888899998887743
No 101
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.80 E-value=5e-18 Score=179.45 Aligned_cols=384 Identities=14% Similarity=0.057 Sum_probs=235.2
Q ss_pred hhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 009130 41 STQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPR 119 (543)
Q Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 119 (543)
+.+..+.....+..+.+.+|.. ..++.|+++||+| ||++++.+.++..++.++ ++++++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~G---------------Rk~~~~~~~~~~~i~~~~-----~a~a~~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFG---------------RKPVLLVSLLLFIIFGIL-----TAFAPN 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcc---------------cHHHHHHHHHHHHHHHHH-----HHHhCc
Confidence 4556666666677788888887 5668999999999 999999999999999998 888888
Q ss_pred CChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 009130 120 PVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPT 198 (543)
Q Consensus 120 ~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~ 198 (543)
++.+++.|+++|++.+........+++|+++ ++|+.+..+ ....-.++.++++.+.++.. .|||......+|.
T Consensus 171 ---~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 171 ---YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPS 244 (521)
T ss_pred ---HHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 8999999999999999999999999999996 789999999 77788888888888888876 8999999988888
Q ss_pred HHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccccccccccc
Q 009130 199 LVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADRED 278 (543)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (543)
...++..++.++.|.....+++...+... .++
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~------------------------------------------------l~~ 276 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKI------------------------------------------------LKK 276 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHH------------------------------------------------HHH
Confidence 87766633433332210000000000000 000
Q ss_pred ccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh
Q 009130 279 AMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES 358 (543)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~ 358 (543)
.. +.++...++ .+..+......++.....+++....+.++.+++....+...+.+........-++.....
T Consensus 277 ~a---~~n~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~ 347 (521)
T KOG0255|consen 277 IA---KLNGRKLSV------KELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSG 347 (521)
T ss_pred HH---hhcCCCCCc------HHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhh
Confidence 00 000000000 000000000000011111122446777888754333333333321111111122222233
Q ss_pred hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc-c--hHHHHHHHHHh
Q 009130 359 LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFP-G--NLFVGTMIVGV 434 (543)
Q Consensus 359 ~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~-~--~~~~~~~l~G~ 434 (543)
+|.+.. ....+.+..........+...|++| |+.....+..+..++++.... ... . ...+...+..+
T Consensus 348 lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~g------R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
T KOG0255|consen 348 LGGNIY---LNFTLSGLVELPAYFRNGLLLPEFG------RRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKF 418 (521)
T ss_pred cCchHH---HHHHHHHHHHhhHHHHHHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 444332 2223333355555566678888884 457788888888887776662 222 2 23334444455
Q ss_pred hhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHH
Q 009130 435 CYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
+.+..+.....+..|.+|+..|..+.|.......++++ ++|.+........ ....+.+.+....+.
T Consensus 419 ~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i-~ap~~~~~~~~~~-------------~~~~~~~~~~~~~l~ 484 (521)
T KOG0255|consen 419 FIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSI-LAPLFPLLLRQMF-------------PLLGLILFGWLALLL 484 (521)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhc-------------ccchHHHHHHHHHHH
Confidence 66666777788999999999999999999999999984 7775543332221 112223345555566
Q ss_pred HHHHHHHhhcchhhhH
Q 009130 515 SLVAFLLFLRTRRFYN 530 (543)
Q Consensus 515 ~i~~~~~~~~~~~~~~ 530 (543)
..++..+.++++.+..
T Consensus 485 ~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 485 GLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHhcCcccCCCCC
Confidence 6566566667666544
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.79 E-value=3.7e-17 Score=169.55 Aligned_cols=161 Identities=13% Similarity=0.018 Sum_probs=115.3
Q ss_pred hHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 321 NLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 321 ~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
.+++++|||.++...+..++............+++.++ +|.++...+.......++.+++.++.+++.||+++|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~----- 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK----- 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 35778999999988888777766655555566666665 476655555444455667788999999999999643
Q ss_pred hHHHHHHHHHHHHHHHHHhh-c--CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCc-------chhhHHHHHHhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIAS-G--FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVR-------HMGTIFNTISIACPV 469 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~~-~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~i 469 (543)
+.+.++.++.+++++.+.. + +.+..++..++.|+|.+...+...++.+|..+.+ +.|..+|+.+....+
T Consensus 295 -~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl 373 (448)
T PRK09848 295 -NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC 373 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH
Confidence 5666677776666655442 2 2233445566788888888888888888877643 458999999998889
Q ss_pred hhhhhhhhhhhhhhhhccC
Q 009130 470 GSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 470 g~~i~~~~l~g~l~~~~g~ 488 (543)
|.. +++.+.|.+.+..|.
T Consensus 374 g~a-ig~~i~g~~l~~~G~ 391 (448)
T PRK09848 374 GQA-IGGSIPAFILGLSGY 391 (448)
T ss_pred HHH-HHHHHHHHHHHHcCC
Confidence 885 788888888877663
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.79 E-value=7.8e-16 Score=157.68 Aligned_cols=416 Identities=10% Similarity=0.021 Sum_probs=224.0
Q ss_pred cccccc-ccHHHHhhcCCChhhHHHHHHHhhhc-ccccchhhHhhhhc-ccccccccccccccCCchHHHHHHHHHHHHH
Q 009130 29 TYTFSI-YSSTLKSTQNYDQSTLERVAVFKDMG-GSAGILSGLLFSYV-TLNHHHHQTRTRFLRGPWVVHFTGAILCFTG 105 (543)
Q Consensus 29 ~~~~~~-~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~d~~-g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g 105 (543)
.|.+.. +..++++++|+++.+.+.+...+... +...+++|+++||+ | ||+++.+|.++.+++
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilG---------------rrr~iliG~il~~lg 89 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLG---------------NRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---------------cHHHHHHHHHHHHHH
Confidence 454443 34456778999999999555554444 44677999999999 8 999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-C--CCcchhHHHHHhhhhhHHHHHHHHHHhc
Q 009130 106 YFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-H--YSGTIVGILKGFVGLSGAVLTQVYKTVC 182 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 182 (543)
.++ .+...+. ...+.....+.++|.|...+...++++|.|| + +|..+.++...+.++|+.++|.+.+.+.
T Consensus 90 ~ll-----l~~~~~~--~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 90 HVV-----LGASEIH--PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHH-----HHHhhcc--hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 877 3322211 2223333334445666666666788999998 3 5899999999999999999999999998
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhheecc-CCC----CcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 009130 183 NGNPSTYILVLALLPTLVSLLFMSHVRIY-GTN----SVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITF 257 (543)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (543)
+..+|++.+..+.+..+++++.....+.. +++ ++..++........+.................. .++......
T Consensus 163 ~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 241 (493)
T PRK15462 163 EEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFW-KEWSVYALI 241 (493)
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 88889988887776666665554443321 111 111111111111111111111000000000000 011111111
Q ss_pred HHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHH
Q 009130 258 IILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIA 337 (543)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 337 (543)
...+.....+.. ..+ .+.+ ++++ ++ -..+..+++.
T Consensus 242 ~~~~~~~~~~~~-~~~-~~~~------------------------------------~~er----~r---~~~~~~l~~~ 276 (493)
T PRK15462 242 VATIIGLGVLAK-IYR-KAEN------------------------------------QKQR----KE---LGLIVTLTFF 276 (493)
T ss_pred HHHHHHHHHHHH-HHH-hcCC------------------------------------HHHH----hh---HHHHHHHHHH
Confidence 111111111110 000 0000 0000 00 0111122221
Q ss_pred HHhhhchhhhhhhchHHHHHh------hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH-HHHHHHHH
Q 009130 338 TLCGMGSGIATMNNIAQVGES------LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF-MVITLVAM 410 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~------~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~-~~~~~~~~ 410 (543)
..+.+..+.-....+..+.++ .|++ -.+++..++..+..++..++.+++=.|..+|++....+. +.+++++.
T Consensus 277 ~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~ 355 (493)
T PRK15462 277 SMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLM 355 (493)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Confidence 111111111111222223322 1332 246677788888888888888887777644322222222 55667776
Q ss_pred HHHHHHHh----h------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhh-hhhhhhhhhhhh
Q 009130 411 SIGHIAIA----S------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIAC-PVGSYICSVRII 479 (543)
Q Consensus 411 ~i~~~~~~----~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~ig~~i~~~~l~ 479 (543)
.++++++. . .++.+++...++.++|.-...|...+.++++.|++.+|..+|+..+.. .+|+. ++..+.
T Consensus 356 g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~-~~g~~~ 434 (493)
T PRK15462 356 SAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANY-LAGVIA 434 (493)
T ss_pred HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 76665442 1 133456667778888988889999999999999999999999997743 57764 444444
Q ss_pred hhhhhhccCCCCccccccchhHHHHHHHHHHHHHH
Q 009130 480 GRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 480 g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
+...+...+.+.........|...|...+...++.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 435 DQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 43322110000000001224777777777655544
No 104
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.77 E-value=9.9e-17 Score=157.04 Aligned_cols=285 Identities=10% Similarity=0.025 Sum_probs=187.9
Q ss_pred hHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHH
Q 009130 122 PVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLV 200 (543)
Q Consensus 122 ~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 200 (543)
+++.+++.-++.|.|.+...+..+.++++..| +++.+.+++.+..+++|..++|.+++.+.....
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~-------------- 74 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGA-------------- 74 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCC--------------
Confidence 38999999999999999999999999999997 678999999999999999999999887752100
Q ss_pred HHHHHhheeccCC--CCc--ccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccccccccccc
Q 009130 201 SLLFMSHVRIYGT--NSV--DDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADR 276 (543)
Q Consensus 201 ~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (543)
.+... +.. +..++...+..++. +..++...+.. . +.|
T Consensus 75 --------~~~~~~~~~~~~~~~~~~~~yl~ia~----------------------------~~~~~~i~~~~--~-~~p 115 (310)
T TIGR01272 75 --------GDLSMQVATANAEAAKVHTPYLLLAG----------------------------ALAVLAIIFAF--L-PLP 115 (310)
T ss_pred --------cchhhhhhhhhHHHHHHHHHHHHHHH----------------------------HHHHHHHHHHH--c-cCC
Confidence 00000 000 00001111111110 10111111111 1 111
Q ss_pred ccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHH
Q 009130 277 EDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVG 356 (543)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~ 356 (543)
+.++ ++.++++ .++ . ...++.+++|.++...+..++..+....+..|.+.|+
T Consensus 116 ~~~~----------------~~~~~~~------~~~--~----~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl 167 (310)
T TIGR01272 116 ELQE----------------ADVARVS------SGD--T----TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFL 167 (310)
T ss_pred CCCc----------------ccccccc------ccc--c----cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0000000 000 0 0113456788888888888888888888999999999
Q ss_pred Hh---hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHH
Q 009130 357 ES---LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVG 433 (543)
Q Consensus 357 ~~---~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G 433 (543)
++ .|+++++++...+.+..+.++||++.+++.||++++ +.+.++.++.+++.++....+.....+..++.|
T Consensus 168 ~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~------~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g 241 (310)
T TIGR01272 168 SDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG------RYLAFNAFLAVLLSIGAALTHGYVAMWFVLALG 241 (310)
T ss_pred HhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 75 489999999999999999999999999999999654 345556555555554443323333344566889
Q ss_pred hhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 434 VCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 434 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
++.+..+|...+...+.+|+ +.+++.++. ..+.+|+ .+.|++.|.+.|..| .+.+|++..
T Consensus 242 ~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg-~i~P~l~G~lad~~g------------~~~a~~v~~ 301 (310)
T TIGR01272 242 LFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGG-AIVPLLQGSLADCLG------------IQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcc-hHHHHHHHHHHHhcc------------chHHHHHHH
Confidence 99999999988888888874 456666765 4456777 478889999999886 777777443
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.77 E-value=9.2e-17 Score=158.80 Aligned_cols=186 Identities=16% Similarity=0.170 Sum_probs=142.3
Q ss_pred hHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhh----CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcC
Q 009130 321 NLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESL----HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLG 396 (543)
Q Consensus 321 ~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~ 396 (543)
...+++|+|++|.+.+........+..+....+.|.+++ +.+.+..+.+.++.-+..++.-.+..++.+|+|.|
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-- 289 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-- 289 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--
Confidence 357889999999988876666566666666667666654 44556678888888888999999999999999654
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHH-Hhhhhhhhhhh
Q 009130 397 WARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTI-SIACPVGSYIC 474 (543)
Q Consensus 397 ~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~ig~~i~ 474 (543)
+.++++.+++.+=....+ .++++.+.+.-.+-++-.+.......=++.+.+|+|..++.+.+. +.+..++..+
T Consensus 290 ----~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i- 364 (412)
T PF01306_consen 290 ----NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIII- 364 (412)
T ss_dssp ----HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHH-
T ss_pred ----hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHH-
Confidence 677778888888777776 567777777777878877777766777899999999999999996 6778888864
Q ss_pred hhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 475 SVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 475 ~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
.+.+.|.++|..| ++..|++++.+.+...+++.+..++.
T Consensus 365 ~s~~~G~lyd~~G------------~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 365 LSPLAGYLYDRIG------------FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HhhhHHhhHhhcC------------cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 4568999999998 99999999988887777777765443
No 106
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.76 E-value=4.7e-16 Score=159.65 Aligned_cols=186 Identities=17% Similarity=0.177 Sum_probs=147.3
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCC
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWA 398 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~ 398 (543)
...+++.|.|+...+.+..++..-+...++.....+.+ ++|++..+...+..+..+..++|.+++|++.||+|.|.
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~--- 348 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT--- 348 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch---
Confidence 45567778888888888877765555555666666665 68999999999999999999999999999999998651
Q ss_pred chHHHHHHHHHH-HHHHHHHh--------hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhh
Q 009130 399 RPIFMVITLVAM-SIGHIAIA--------SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPV 469 (543)
Q Consensus 399 r~~~~~~~~~~~-~i~~~~~~--------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~i 469 (543)
+.++..+.+.. .++...+. ..+.+.+++..++.|+..|+..+..-++.+++.|+++.+.-+|+..+.+-.
T Consensus 349 -~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 349 -KRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 13444444333 33333222 345667888899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 470 GSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 470 g~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
.+ .+||.+.|.+.|.+|+ .|.++....++.+++.++...+
T Consensus 428 ss-~lGPll~g~i~~~tg~-----------~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 428 SS-WLGPLLFGLITDATGS-----------QRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HH-HHHHHHHHHHHHHhCC-----------chhHHHHHHHHHHHHHHHHhhc
Confidence 98 4999999999999984 8899998888888888775444
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.75 E-value=2.4e-15 Score=151.52 Aligned_cols=189 Identities=18% Similarity=0.137 Sum_probs=137.2
Q ss_pred hHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhC-CCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 321 NLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLH-YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 321 ~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
+..+++|+|++..+.+..++.....-.+..+.+.++++.| ++.+..+...++..++.++.-...+++..|++.
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~------ 272 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGI------ 272 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------
Confidence 3468899999988877777766666667777888899987 787788888888888888877777777777754
Q ss_pred hHHHHHHHHHHHHHHHHHhhc-Cc-chHHHHH----HHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHh-hhhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIASG-FP-GNLFVGT----MIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISI-ACPVGSY 472 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~~----~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~ig~~ 472 (543)
+.++.++.+..++=..+++.. ++ +..++.. .+-|+.++..+.....++.+..|++.+++++|+... ..++|.
T Consensus 273 ~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~- 351 (400)
T PF03825_consen 273 KWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG- 351 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH-
Confidence 478888888888877776632 33 3322222 347899998888889999999999999999999864 567888
Q ss_pred hhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 473 ICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 473 i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
.+|..++|+++|..|... ...|...+.+.++..++..++..++.
T Consensus 352 ~iG~~igG~l~~~~g~~~------~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARG------MFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred HHHHHHHHHHHHHhcchh------hhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 488899999999987311 11244455555555555555544443
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=5.8e-16 Score=160.51 Aligned_cols=364 Identities=11% Similarity=0.008 Sum_probs=223.9
Q ss_pred HHHcCCcc-ccccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHH
Q 009130 23 QCSVGTTY-TFSIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAIL 101 (543)
Q Consensus 23 ~~~~g~~~-~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~ 101 (543)
.++-|..+ ......|.+.+++|++.++++.+.+...+.....+++|++.||++ .+|+ -||+.++++.++
T Consensus 35 y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~-----i~G~-----rRr~~l~~~~~l 104 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFP-----LFGY-----TKRWYLVLSGLL 104 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCc-----cchHHHHHHHHH
Confidence 34445432 344667888889999999999777777788778888999999996 1222 156667777666
Q ss_pred HH-HHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcc---hhHHHHHhhhhhHHHHHHH
Q 009130 102 CF-TGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGT---IVGILKGFVGLSGAVLTQV 177 (543)
Q Consensus 102 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~---~~gi~~~~~~lg~~i~~~l 177 (543)
.. +.... .+..++ ......+..++.+++.+...++.-....|..++++.. +.+......++|.++++.+
T Consensus 105 ~~~~~~~~-----l~~~~~--~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 105 GSAILYGL-----LPGKVS--SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHh-----cccccc--hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 53 33222 333344 1444455888999999999999999999999844433 3344444455888999888
Q ss_pred HHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 009130 178 YKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITF 257 (543)
Q Consensus 178 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (543)
++.+.+..+|+..+.+.....++..+...++
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~------------------------------------------------- 208 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQLFVSNLS------------------------------------------------- 208 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHhc-------------------------------------------------
Confidence 8888766667666554433222221111111
Q ss_pred HHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHH
Q 009130 258 IILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIA 337 (543)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 337 (543)
+|++.... ++.++ .+ ........ ....+..++.....++.+++|..|...+.
T Consensus 209 ---------------~E~~~~~~--~~~~~--~~-----~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~i~~~l~f 260 (468)
T TIGR00788 209 ---------------KERRAFVR--PRIGT--YL-----EMNMALLT----LGVLANVKVQILGLRGAIQLLEIAKPLIF 260 (468)
T ss_pred ---------------cccccccc--ccccc--cc-----hhhhhhhh----hhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 11100000 00000 00 00000000 00000011112334566788888875544
Q ss_pred HHh-h-hchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Q 009130 338 TLC-G-MGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHI 415 (543)
Q Consensus 338 ~~~-~-~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~ 415 (543)
.++ . .........+. ...+.+|+++++.+....+.+++.+++..+.+++.+|++ .+.++.++.++.+++.+
T Consensus 261 ifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~------~r~~l~~~~~l~~~~~~ 333 (468)
T TIGR00788 261 IFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFP------YRLLFGVTTLLYTLSSL 333 (468)
T ss_pred HHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCC------HHHHHHHHHHHHHHHHh
Confidence 444 1 11111111111 111357999999999999999888888888888776664 44677777777766553
Q ss_pred HHh-----h------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 416 AIA-----S------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 416 ~~~-----~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
... . ++........++.+++.+..+.....++.+..|+++.|+.+++.....++|.. +++.++|.+.+
T Consensus 334 ~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~-v~~~~gg~l~~ 412 (468)
T TIGR00788 334 FDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSS-VSGFLGVLLME 412 (468)
T ss_pred CceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 321 0 12223444566778888888888889999999999999999999998999984 88888999998
Q ss_pred hccC
Q 009130 485 RVAS 488 (543)
Q Consensus 485 ~~g~ 488 (543)
..|.
T Consensus 413 ~~g~ 416 (468)
T TIGR00788 413 TIGI 416 (468)
T ss_pred HcCC
Confidence 8773
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.74 E-value=1.4e-15 Score=158.48 Aligned_cols=349 Identities=7% Similarity=-0.044 Sum_probs=201.6
Q ss_pred ccHHHHhhcCCChhhHHHH-HHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQSTLERV-AVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASV 113 (543)
Q Consensus 35 ~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~ 113 (543)
+..++++.+|+++.+++.+ ...-....+..++.|.++||. |+|+|| ||+.++.+.+.++++..++.
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t----~sr~Gr------rrp~il~g~i~~~i~~~llf--- 95 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNT----RSRWGK------FKPWILIGTLANSVVLFLLF--- 95 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcC----CCCCCC------cchhHhhhhHHHHHHHHHHH---
Confidence 4567788889999999944 444444455789999999985 355566 68888889888888876632
Q ss_pred hccCCCCC---hHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 114 VGLLPRPV---PVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 114 ~~~~~~~~---~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
..++.. .+..+++..++.+++..+..++-.+...+.-+ ++|.+..+.-..+.++|+.+.+.+...++
T Consensus 96 --~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~------ 167 (473)
T PRK10429 96 --SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFV------ 167 (473)
T ss_pred --cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 222110 13334455566677777777777778888773 57998888866666666665543322211
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 189 YILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
...+.. ++...+. ..+...+ +..++.....
T Consensus 168 --------------------~~~g~~-~~~~g~~----~~~~i~~-------------------------~~~~~~~~~~ 197 (473)
T PRK10429 168 --------------------NYVGGG-DRGFGFQ----MFTLVLI-------------------------AFFIVSTIIT 197 (473)
T ss_pred --------------------HHhCCC-chhhhHH----HHHHHHH-------------------------HHHHHHHHHH
Confidence 000000 0000000 0100000 0001111111
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIAT 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~ 348 (543)
....||+++..+ ++. +++++.+.....+.+++|+.++.+.+..++........
T Consensus 198 ~~~~~e~~~~~~----------------~~~-----------~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 198 LRNVHEVYSSDN----------------QVS-----------AEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred HcCceecCCccc----------------ccc-----------ccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 111122110000 000 00000111233455678999888777766665444444
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh------hcCc
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA------SGFP 422 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~------~~~~ 422 (543)
....+++.+...-++...+.+.+...+..+++.+++++++||+|+| +.+.++.++.+++.+.+. ..+.
T Consensus 251 ~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 251 NGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR------ILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred hhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH------HHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 4444444444433555566666777788899999999999999754 455555554444333221 1222
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~ 488 (543)
..+++..++.|++.+...+..+++++|..+ .+..|..+|......-++.. +++.+.|.+.+..|.
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~a-l~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSA-FAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCC
Confidence 334555667788888888888888888844 45567788998888888874 778888998887764
No 110
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.72 E-value=3.3e-15 Score=152.42 Aligned_cols=386 Identities=13% Similarity=0.039 Sum_probs=216.1
Q ss_pred HHHHhhcCCChhhHHHHHHHhh-hcccccchhhHhhhhcccccccccccccccCCchHHHHH-HHHHHHHHHHHHHHHHh
Q 009130 37 STLKSTQNYDQSTLERVAVFKD-MGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFT-GAILCFTGYFLVWASVV 114 (543)
Q Consensus 37 ~~l~~~~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~-g~~~~~~g~~~~~~~~~ 114 (543)
+.+.+++|.+..+.+.+..... .+.+.+++.|.++||-- .|+|||+.++. +.+...++..+ .
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~-----------sr~GRRrp~il~g~~~~~~~l~l-----l 91 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCT-----------SRFGRRRPFIAAGAALVAFAVIL-----I 91 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCC-----------CCCCChHHHHHHHHHHHHHHHHH-----H
Confidence 3456789999999995544444 44458999999999631 23337777666 46666666666 3
Q ss_pred ccCCCCC-----------hH---HHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCC--cchhHHHHHhhhhhHHHHHHH
Q 009130 115 GLLPRPV-----------PV---PLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYS--GTIVGILKGFVGLSGAVLTQV 177 (543)
Q Consensus 115 ~~~~~~~-----------~~---~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~r--g~~~gi~~~~~~lg~~i~~~l 177 (543)
+++++.. .. +.+++.-.+..++.+...++..++++|.+| ++| +.+.++.....++|+++++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333210 00 122223334445777788888899999998 433 689999999999999999877
Q ss_pred HHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCccc-c----hhhhhHHHHHHHHHHHHHHHHHHhhcccchhhH
Q 009130 178 YKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDD-K----KHLNAFSAVAMTLAAYFMVITVMENLLTFSLWA 252 (543)
Q Consensus 178 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (543)
++.... ....|...++. + +....| .++.
T Consensus 172 g~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~F-~i~a---------------------- 204 (477)
T TIGR01301 172 GAYSGL------------------------YKIFPFTKTEACGVSCANLKSCF-LIDI---------------------- 204 (477)
T ss_pred HHHHhH------------------------HHhcccccccccccccchHHHHH-HHHH----------------------
Confidence 664310 00000000000 0 011111 1110
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhc--chh
Q 009130 253 RIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMC--TGN 330 (543)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 330 (543)
+.+++.........+|.+...+ + + . +++|.+++ ++.+ .........+.++ -+.
T Consensus 205 ------~~l~i~~l~t~~~v~E~~~~~~---~-~---~----~~~~~~~~-------~~~~-~~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 205 ------ILLAILTYIALSAVKENPLIGS---D-D---F----INSEAAPP-------SKHG-EEAFFGELFGAFKYLPRP 259 (477)
T ss_pred ------HHHHHHHHHHeeeeeccCCCcc---c-c---c----hhhhcccc-------cccc-hhhhHHHHHHHHHHCCHH
Confidence 1111112222222333221100 0 0 0 00000000 0000 0001112222222 367
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHh--hCCCch------hh---H-HHHHHHHHHHhhhccccccchhhhhhhcCCC
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGES--LHYSTT------EI---N-SLISLWSIWNFFGRFGAGYGSDVFLHKLGWA 398 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~~------~a---~-~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~ 398 (543)
+|.+++..++.+.+.+.+..+..++..+ ++-++. +. + +....+++...+.+++.-++.+|+| +
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g-----~ 334 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWG-----A 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----c
Confidence 8999999999999888887777766543 232221 11 1 2223334444444444444444443 2
Q ss_pred chHHHHHHHHHHHHHHHHHh-hcC---------------------cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCC--c
Q 009130 399 RPIFMVITLVAMSIGHIAIA-SGF---------------------PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGV--R 454 (543)
Q Consensus 399 r~~~~~~~~~~~~i~~~~~~-~~~---------------------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~--~ 454 (543)
|+.+..++.++.++++.... ..+ .+..++...+.|+..+...++.++++++..++ +
T Consensus 335 ~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~ 414 (477)
T TIGR01301 335 GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGA 414 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCC
Confidence 34666677666666655432 111 13455667788999999999999999999984 5
Q ss_pred chhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 009130 455 HMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 455 ~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
+.|...|+.|....+..+ +.....|.+.+..|+ +-.+.+.+.++..++++++++++.++.+
T Consensus 415 ~~G~~mgilN~~I~lpQi-i~sl~~g~~~~~~g~----------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 415 GQGLSMGVLNLAIVIPQI-IVSLGSGPWDQLFGG----------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred CCcchhhHHHHHHHHHHH-HHHHHHHHHHHHcCC----------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 669999999998888875 444566776666653 2456788888888899988888776654
No 111
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.72 E-value=4.4e-16 Score=160.41 Aligned_cols=350 Identities=13% Similarity=0.082 Sum_probs=226.5
Q ss_pred cccHHHHhhcCCChhhHHHHHHH-hhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHH
Q 009130 34 IYSSTLKSTQNYDQSTLERVAVF-KDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWAS 112 (543)
Q Consensus 34 ~~~~~l~~~~~~s~~~~~~~~~~-~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~ 112 (543)
.+.+.+.+.+|+++...+.+... -....+..++.|.++||. |+|+|| ||+.+++|.++.+++..++...
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~----~tr~Gr------rrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRT----RTRWGR------RRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeee----cccccc------cceEeehhhHHHHHHHHHhhcc
Confidence 34567788899999999955444 444455899999999975 366777 8888889999999988884321
Q ss_pred -HhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhH
Q 009130 113 -VVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTY 189 (543)
Q Consensus 113 -~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~ 189 (543)
+....... ....+++..++..++......+-.+...+..+ ++|.+..+.-..+..+|..+.+.+...+.+
T Consensus 93 ~p~~~~~~~-~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~------ 165 (428)
T PF13347_consen 93 PPAGLSFTA-KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVS------ 165 (428)
T ss_pred ccchhhhhh-HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh------
Confidence 11111110 12334556666688888888888888899996 479999999888888877666555444321
Q ss_pred HHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccc
Q 009130 190 ILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLR 269 (543)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (543)
..+.+. ..+++......++ +...+......
T Consensus 166 --------------------~~g~~~-~~~~~~~~~~v~~-----------------------------iv~~v~~~i~~ 195 (428)
T PF13347_consen 166 --------------------WFGGGD-TSNGYRWMALVLA-----------------------------IVGLVFFLITF 195 (428)
T ss_pred --------------------hhccCc-cchHHHHHHHHHH-----------------------------HHHHHHhhhhh
Confidence 011000 0001111111111 01111111111
Q ss_pred cccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhh
Q 009130 270 VAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATM 349 (543)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~ 349 (543)
...||+.++. ++++++.+.....++.++||.++.+.+..++.........
T Consensus 196 ~~~ke~~~~~------------------------------~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~ 245 (428)
T PF13347_consen 196 FFVKERSVEV------------------------------TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMN 245 (428)
T ss_pred heeeeccccc------------------------------cccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhh
Confidence 1112200000 0011111223446788899999988888887766665556
Q ss_pred hchHHHHHhh-CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h--cCcchH
Q 009130 350 NNIAQVGESL-HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-S--GFPGNL 425 (543)
Q Consensus 350 ~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~--~~~~~~ 425 (543)
...+++.++. |.+ ...+....+..+...++.+++++++||+|+| +.+..+.++.+++.+++. . .+.+..
T Consensus 246 ~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 246 TFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK------KVYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred hHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce------eehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 6667777664 544 5667777888999999999999999999765 466677777776665544 2 466778
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~ 488 (543)
++..++.|++.+..+...+++.+|..+ +++.|..+|+.+...-++.. +++.+.+.+.+..|.
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~-la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG-LAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH-HHHHHHHHHHHHhCc
Confidence 888889999999999888899988876 34568888998888888874 667778888777664
No 112
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=2.2e-16 Score=149.49 Aligned_cols=333 Identities=10% Similarity=0.005 Sum_probs=199.1
Q ss_pred HHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHH
Q 009130 50 LERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCL 128 (543)
Q Consensus 50 ~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 128 (543)
.|.+++.+.+.-. .++.+|.++|||| ||+++++|++..++.+.+ -+.+.+ +..+..
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yG---------------Rkpvll~c~~~va~s~ll-----~~~S~~---F~afv~ 126 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYG---------------RKPVLLACLIGVALSYLL-----WALSRN---FAAFVL 126 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhC---------------chHHHHHHHHHHHHHHHH-----HHHHHH---HHHHHH
Confidence 3477777777765 6888999999998 999999999999998888 444454 756666
Q ss_pred HHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHH
Q 009130 129 FIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCN---GNPSTYILVLALLPTLVSLLF 204 (543)
Q Consensus 129 ~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~ 204 (543)
.|++.|+.-|-.. +..++++|.++ ++|+++++.+...+++|-++||.+++++.. .....++.+.+....+.
T Consensus 127 aR~l~Gi~kgnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~---- 201 (451)
T KOG2615|consen 127 ARFLGGIFKGNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFIL---- 201 (451)
T ss_pred HHHhhhhccCchH-HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHH----
Confidence 7999999988764 46789999997 689999999999999999999999998743 11111111101100000
Q ss_pred HhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCC
Q 009130 205 MSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPK 284 (543)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (543)
.......+.+..+|+...+++.
T Consensus 202 --------------------------------------------------------a~~~v~~~~~~lpETL~~rk~~-- 223 (451)
T KOG2615|consen 202 --------------------------------------------------------AAGDVTFFPWFLPETLPLRKRN-- 223 (451)
T ss_pred --------------------------------------------------------HHHHHHHHHHhCCccccchhhc--
Confidence 0000000111122221111111
Q ss_pred CCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhH------HH-HHHHHHhhhchhhhhhhchHHHH-
Q 009130 285 LSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNF------WF-LCIATLCGMGSGIATMNNIAQVG- 356 (543)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f------~~-~~l~~~~~~~~~~~~~~~~~~~~- 356 (543)
.|..+..+. .+++++..+ ..+ .....+++|++- |. +.+..+.....+..+.++...+.
T Consensus 224 ---~~~~~~~~~--~~~~~~~~~------~~~---~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~ 289 (451)
T KOG2615|consen 224 ---DEHSTLQEA--ADDRLALLK------FAR---IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTH 289 (451)
T ss_pred ---ccccchhhh--hhhhhhhcc------hhh---hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhc
Confidence 000000000 000000000 000 000111222211 11 11111222111222222223222
Q ss_pred HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhh
Q 009130 357 ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVC 435 (543)
Q Consensus 357 ~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~ 435 (543)
..+|+++.+.+.+.+..++.+.+-+.......||.+.. -+-.+...+..+.-..+++. ...+..++....+..+.
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~----~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN----IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccc----hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 34699999999999999988888887777777776421 11223333333333333333 34556677788888888
Q ss_pred hhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 436 YGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 436 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.....+....++....|++++|++.|+....++++-. +||.+.|.+..+..
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRa-iGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARA-IGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH-hhhhhhheeEEEec
Confidence 7777888889999999999999999999999999995 89988888877653
No 113
>PRK11462 putative transporter; Provisional
Probab=99.70 E-value=1.6e-14 Score=149.65 Aligned_cols=345 Identities=9% Similarity=0.016 Sum_probs=187.7
Q ss_pred ccHHHHhhcCCChhhHHHHHHH-hhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQSTLERVAVF-KDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASV 113 (543)
Q Consensus 35 ~~~~l~~~~~~s~~~~~~~~~~-~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~ 113 (543)
+.....+..|+++..++.+... -..-.+.-++.|.++||. |+|+|| ||+-+++|.+.++++.+++...+
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t----~~r~Gr------~rp~il~g~i~~~i~~~llf~~p 101 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRT----RSRWGK------FRPWVLFGALPFGIVCVLAYSTP 101 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccC----CCCCCC------cchhHhHHHHHHHHHHHHHHhCC
Confidence 4456678899999999954444 344445789999999985 467777 88888889888888877733211
Q ss_pred hccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHH
Q 009130 114 VGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYIL 191 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~ 191 (543)
....+. ....+++..++..++..+...+-.+...+.-+ +||.+..++-..+..+|..+++.+...+.+
T Consensus 102 -~~s~~~-~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~-------- 171 (460)
T PRK11462 102 -DLSMNG-KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN-------- 171 (460)
T ss_pred -CCCcch-HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 111111 12334445556677777777766677777775 579999999988888887777654332210
Q ss_pred HHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccc
Q 009130 192 VLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVA 271 (543)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (543)
..+.+ ++...+.....+++ ++..+........
T Consensus 172 ------------------~~g~~-~~~~g~~~~~~i~~-----------------------------ii~~i~~~i~~~~ 203 (460)
T PRK11462 172 ------------------LIGGD-NKPLGFQGGIAVLS-----------------------------VVAFMMLAFCFFT 203 (460)
T ss_pred ------------------HhCCC-chhhhHHHHHHHHH-----------------------------HHHHHHHHHHHhc
Confidence 00100 00000111110111 0000111011101
Q ss_pred cccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhc
Q 009130 272 ITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNN 351 (543)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 351 (543)
.||+++++ ++ +.+.....+..++|+.++.+....++...........
T Consensus 204 ~kE~~~~~------------------------------~~---~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~ 250 (460)
T PRK11462 204 TKERVEAP------------------------------PT---TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGA 250 (460)
T ss_pred ceeccCCC------------------------------cc---CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH
Confidence 11110000 00 0011234567788988877765554443333222233
Q ss_pred hHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH-HHHHHhhcC--cchHHHH
Q 009130 352 IAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSI-GHIAIASGF--PGNLFVG 428 (543)
Q Consensus 352 ~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~~~--~~~~~~~ 428 (543)
..++.+...-++...+.+.....++++++.+++++++||+++| ..+..+.+..++ +.+.+..++ ....++.
T Consensus 251 ~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 251 MMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV------TIFWWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred hhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH------HHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 3334443322333445566788888899999999999999754 333323222222 222222222 2233444
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 429 TMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 429 ~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.++.|++.+...+...++++|..+ .+.-|..++......-+|.. +++.+.|.+.+..|
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a-lg~~i~g~iL~~~G 389 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA-FGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 556677766666655667776654 34446666666666666663 56667777776654
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.4e-13 Score=137.64 Aligned_cols=353 Identities=11% Similarity=0.032 Sum_probs=217.1
Q ss_pred ccHHHHhhcCCChhhHHHH-HHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQSTLERV-AVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASV 113 (543)
Q Consensus 35 ~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~ 113 (543)
+.-..++.+|+++...|.+ ...=.+-++.-++.|.+.||. +.|+|| +||-++.+.+.+++.+.+.....
T Consensus 35 Ll~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t----~~r~Gr------fRP~lL~g~ip~~i~~~l~F~~p 104 (467)
T COG2211 35 LLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRT----RSRWGR------FRPWLLWGAIPFAIVAVLLFITP 104 (467)
T ss_pred HHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccc----cccccc------ccHHHHHHhHHHHHHHHHHHcCC
Confidence 3346678899999999944 444444455789999999975 378888 88889999999999888844322
Q ss_pred hccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHH
Q 009130 114 VGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYIL 191 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~ 191 (543)
-.-... .....++-..+.+++-.+...+-.+..++.-+ +||.+..+.-+.+.++|..+...+...+.
T Consensus 105 ~~~~~~--k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv--------- 173 (467)
T COG2211 105 DFSMTG--KLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV--------- 173 (467)
T ss_pred CcccCc--chHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 100012 35556667778888888888877777788774 68998888888888777666654433322
Q ss_pred HHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccc
Q 009130 192 VLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVA 271 (543)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (543)
...+.++ ...++......++ +...+..+++...
T Consensus 174 -----------------~~~g~~~-~~~g~~~~~~~~~-----------------------------vi~~i~~l~~~~~ 206 (467)
T COG2211 174 -----------------KLFGGGD-KALGYQGTALVLG-----------------------------VIGVILLLFCFFN 206 (467)
T ss_pred -----------------HHhCCCc-chhhHHHHHHHHH-----------------------------HHHHHHHHHHHHH
Confidence 1111100 0111111110111 1111111222222
Q ss_pred cccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhc
Q 009130 272 ITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNN 351 (543)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 351 (543)
.||+..+.+ + .+...+.+........++|+++..+++...+...........
T Consensus 207 v~ER~~~~~------------------~----------~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~ 258 (467)
T COG2211 207 VKERVVETQ------------------P----------TKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSI 258 (467)
T ss_pred hhcccCccc------------------c----------CcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhh
Confidence 233222111 0 000011112233456789999988888666554433333333
Q ss_pred hHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc--CcchHHH
Q 009130 352 IAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SG--FPGNLFV 427 (543)
Q Consensus 352 ~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~--~~~~~~~ 427 (543)
..+|.+. +|.++............+.+++.++...+.+|+|+| +++..+.++.+++.+.+. .+ +....++
T Consensus 259 ~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk------~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~ 332 (467)
T COG2211 259 MVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK------KLFLIGLLLLAVGYLLLYFTPAGSVVLIVV 332 (467)
T ss_pred hheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH------HHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 3444443 477777777777788888888899999999999654 677778888777776654 22 3344555
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcC-------CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFG-------VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE 490 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~ 490 (543)
..++.+++.+...+...++++|..+ .+.-|..+|.+....=+|.. ++..+.|++.+..|..+
T Consensus 333 ~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a-la~~~~g~~L~~~Gyv~ 401 (467)
T COG2211 333 ALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA-LAGFIPGWILGAIGYVP 401 (467)
T ss_pred HHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCC
Confidence 6678889999998888899887754 34457888888766666664 55557777777776443
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=5.6e-14 Score=136.11 Aligned_cols=184 Identities=16% Similarity=0.167 Sum_probs=144.5
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCC
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWA 398 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~ 398 (543)
.+.++.+++++...+.+..++..=+..........+.. ++|++..+...+....++..+.|.++.|++.||++.|
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k---- 318 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK---- 318 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----
Confidence 45677777787777666666654444445555555665 7899999999999999999999999999999999754
Q ss_pred chHHHHHHHHHHHHHHH-HHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 399 RPIFMVITLVAMSIGHI-AIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 399 r~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
+++..++++..+.++ .+....+..+++..+++|+..|+..+..-++..+..|+++.+..+|+.++.+..++ +++|+
T Consensus 319 --~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S-~~gp~ 395 (438)
T COG2270 319 --PVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAAS-FLGPF 395 (438)
T ss_pred --eeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHH-HHHHH
Confidence 455566655554444 34344566677778899999999999999999999999999999999999999999 49999
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+.+.+.+.+|+ -|..+.....+..++.++...+
T Consensus 396 lv~v~t~iTg~-----------~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 396 LVAVITQITGS-----------SRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HHHHHHHHhcc-----------hhhHHHHHHHHHHhhHhhEEee
Confidence 99999999985 7788887777777776654333
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.62 E-value=1e-12 Score=130.22 Aligned_cols=416 Identities=10% Similarity=-0.016 Sum_probs=242.9
Q ss_pred cccc-ccccHHHHhhcC----CChhhHH-HHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHH
Q 009130 29 TYTF-SIYSSTLKSTQN----YDQSTLE-RVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILC 102 (543)
Q Consensus 29 ~~~~-~~~~~~l~~~~~----~s~~~~~-~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~ 102 (543)
.|.+ +++..++..+++ +++++.. +.+.+..+.+...+++|+++||+ +|+|++++.|.++.
T Consensus 37 yYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~--------------LG~~~tI~lGail~ 102 (498)
T COG3104 37 YYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV--------------LGTRRTIVLGAILM 102 (498)
T ss_pred hhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh--------------cchhHHHHHHHHHH
Confidence 3443 456677777777 9999887 77888888888899999999998 48999999999999
Q ss_pred HHHHHHHHHHHhccCC-CCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-C--CCcchhHHHHHhhhhhHHHHHHHH
Q 009130 103 FTGYFLVWASVVGLLP-RPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-H--YSGTIVGILKGFVGLSGAVLTQVY 178 (543)
Q Consensus 103 ~~g~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~ 178 (543)
++|.++ .+..+ . ....+.+.-++.++|.|..-+...+++.|.+| + +|-...++...+-++|+.+.|.+.
T Consensus 103 ~iGh~~-----L~~~~~~--~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 103 AIGHLV-----LAISSVS--GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHHH-----Hhccccc--cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 999999 44432 2 15667777777779999999999999999996 3 578889999999999999999999
Q ss_pred HHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCC------cccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhH
Q 009130 179 KTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNS------VDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWA 252 (543)
Q Consensus 179 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (543)
+++.++.+|+.-|-.+.+-...+++..+..+..-.+. ...+.........++......... -.......+.
T Consensus 176 ~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~ 252 (498)
T COG3104 176 GLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALL---TLLLNQNTFS 252 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 9999999999999999999888888777665321111 011111111111111111111100 0011111111
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHH
Q 009130 253 RIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFW 332 (543)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 332 (543)
+.... ..+...........+. + +..+ ++ +++ ..+.
T Consensus 253 ~~~~~-~~i~~~~~~~~~~~~~-----~-----------------------------~~~~-er------~r~---~~~~ 287 (498)
T COG3104 253 GVLLV-ISILIAIIYFAEAFRS-----P-----------------------------KVFD-ER------RRL---LAAI 287 (498)
T ss_pred HHHHH-HHHHHHHHHHHHHhcc-----C-----------------------------ccHH-HH------HHH---HHHH
Confidence 11111 1111111110000000 0 0000 00 011 1111
Q ss_pred HHHHHHHhhhchhhhhhhchHHHHH---h---hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH-HHHH
Q 009130 333 FLCIATLCGMGSGIATMNNIAQVGE---S---LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI-FMVI 405 (543)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~---~---~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~-~~~~ 405 (543)
.+++...+.+..+.-..+.+..+.+ + .|++ -..++..++..+.-++..++..++-.|.+++++..+.+ -..+
T Consensus 288 ~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFal 366 (498)
T COG3104 288 PLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFAL 366 (498)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHH
Confidence 1111111111111111112222222 1 2322 34566777888888888888888888866654333222 2444
Q ss_pred HHHHHHHHHHHHh-----hc------CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhh
Q 009130 406 TLVAMSIGHIAIA-----SG------FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYIC 474 (543)
Q Consensus 406 ~~~~~~i~~~~~~-----~~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~ 474 (543)
+..++..+++++. .. +.++++...++.+++--...+...+++....|+.-.+...+...+....+.. +
T Consensus 367 Gl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~-l 445 (498)
T COG3104 367 GLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQT-L 445 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-h
Confidence 5555555544332 11 2345666777888888888888889999999999999999999888888774 4
Q ss_pred hhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 475 SVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 475 ~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+..+.+...+ ++ ..+....+...|+..+...++..+..+.+
T Consensus 446 ~g~va~~~~~-~~-----~~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 446 GGQVAGLTAV-TD-----PAYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred hceecccccc-cc-----hhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 4334442111 00 00011135566776666555555444433
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.62 E-value=1.1e-12 Score=127.61 Aligned_cols=375 Identities=12% Similarity=0.034 Sum_probs=232.6
Q ss_pred HHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 009130 37 STLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGL 116 (543)
Q Consensus 37 ~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~ 116 (543)
-.+..|++++..-.+.......+..-..+..|..+|+++ +-+|+ -|-+-++.|.++++.+..+......-.
T Consensus 4 RVMIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~----s~~G~-----rRtPyI~~G~~~~~~g~~~ap~a~~~l 74 (403)
T PF03209_consen 4 RVMIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHP----SILGW-----RRTPYIWGGTLLQAGGLAIAPFALLLL 74 (403)
T ss_pred hhHHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCc----ccCcC-----CchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456778999988888554554544456788999999864 23333 133446677777777666544332222
Q ss_pred CC-------CCChHHH--HHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCc
Q 009130 117 LP-------RPVPVPL--MCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 117 ~~-------~~~~~~~--~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 186 (543)
.. +. ..+. ....-++.|+|.+...++-.+.++|.-| ++|+++.++.....-+|.+++..+.+.+.++++
T Consensus 75 ~~~~~~~~~~~-~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 75 AESGQQSSGPF-WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred ccccccccccc-HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 23 21 1222 2335678999999999999999999997 689999999999999999999888887765432
Q ss_pred h-hHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhh
Q 009130 187 S-TYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLA 265 (543)
Q Consensus 187 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (543)
. +..-.....+.+. .++.++.
T Consensus 154 ~~rL~~v~~~~a~i~----------------------------------------------------------~~l~~ia 175 (403)
T PF03209_consen 154 PERLIQVIQGVALIA----------------------------------------------------------LLLNLIA 175 (403)
T ss_pred HHHHHHHHHHHHHHH----------------------------------------------------------HHHHHHH
Confidence 1 1111111111000 0000000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchh
Q 009130 266 SPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSG 345 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~ 345 (543)
. ++.+++.++ . .+ .+++++.+....+++.+.+|+...+....++....+
T Consensus 176 ~-----wg~E~r~~~----------------~-~~---------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~ 224 (403)
T PF03209_consen 176 L-----WGQEPRRSR----------------R-AA---------AAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAF 224 (403)
T ss_pred H-----HhcccCCcc----------------c-cc---------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHH
Confidence 0 111111110 0 00 001111222344567777777766666555554444
Q ss_pred hhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH--h--hc
Q 009130 346 IATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAI--A--SG 420 (543)
Q Consensus 346 ~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~--~--~~ 420 (543)
+.-...+-+|. +.+|++..+...+....+.+..+|-...|++..|-. +++....+++...++++.++ + ..
T Consensus 225 ~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~-----~~~~~a~~G~~~~~~~f~lii~a~~~~ 299 (403)
T PF03209_consen 225 FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRL-----GKKRTAALGCLLGALAFALIILAGPLG 299 (403)
T ss_pred HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33333333444 346999999999999999999999999998877422 22234445555555544432 2 34
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
+++.+....+++|++.|......-+.+.++..+++.|...|.+..+++++.. ++..++|.+.|....-.+. ....+|
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~G-lg~~~GG~~~D~~~~~~~~--~~~~aY 376 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARG-LGTFLGGALRDLVRALFGN--SPALAY 376 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccC--CcchHH
Confidence 5677888899999999987777777888999999999999999999888874 6777888877753210000 012358
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009130 501 MLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~ 518 (543)
...|.+-+...+++.++.
T Consensus 377 ~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 377 GVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888887777776666553
No 118
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.3e-13 Score=135.10 Aligned_cols=176 Identities=13% Similarity=0.181 Sum_probs=159.3
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
...+.+.++.|......+.....+|++.+|+|.|..+++.+.+.|+.+..++.++...+.||+ +||+++...+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~------~Rr~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL------ERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc------chHHHHHHHHH
Confidence 345667777777777888899999999999999999999999999999999999999999999 55688888999
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 409 AMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 409 ~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+.+++.++.+ .++...+.++.++.|+..|..++...+++.++.|+++++++.++++.+..++. ++|.+++.++.|..|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~-v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT-VLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH-HHhccHHHHHHHHhh
Confidence 9999988777 57778899999999999999999999999999999999999999999999998 589889999999998
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
||.+|++.+++.++..+..+...+
T Consensus 166 ------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 ------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999888887776666
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.48 E-value=5e-15 Score=154.28 Aligned_cols=394 Identities=14% Similarity=-0.001 Sum_probs=3.0
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
+.....++++|+++.+|.|++.+.+-++.. ..++..++.+|.. |-+.+-+|.+++++|++++++
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h---------------rprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH---------------RPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---------------CcceeeecHHHHHHHHHHHhc
Confidence 345579999999999999999999999886 5667778877754 555577788888888888654
Q ss_pred --HHhcc-------------------C---------------------CCCChHHHHHHHHHHHhcCcchhhhhHHHHHh
Q 009130 112 --SVVGL-------------------L---------------------PRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGV 149 (543)
Q Consensus 112 --~~~~~-------------------~---------------------~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~ 149 (543)
...+- . .....+..++++.++.|+|....++...+++-
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 00100 0 00002455667899999999999999999999
Q ss_pred hhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHH
Q 009130 150 MNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAV 228 (543)
Q Consensus 150 ~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (543)
|+.+ ++-+..+|+..+...+|+++|-.+++...+- ++. .+..+.+.
T Consensus 168 Dnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~----------------------yvD-~~~~~~~~---------- 214 (539)
T PF03137_consen 168 DNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRI----------------------YVD-FPKVPPDG---------- 214 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCccchhhhhHHhhccHHHHHHHHHHHHhc----------------------eeC-CccccccC----------
Confidence 9997 5688999999999999999997776655321 111 11100000
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHH--HHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCccchh
Q 009130 229 AMTLAAYFMVITVMENLLTFSLWAR--IITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVT 306 (543)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (543)
..+..+...|-..+| .++.+.+.++..+|+..+-|+-|+.++..++.+.++.+...++++...+++..
T Consensus 215 ----------~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (539)
T PF03137_consen 215 ----------VGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSK 284 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccc
Confidence 000111222222222 23333445555666655444433331111111111101000000000000000
Q ss_pred cccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHH-HHhhhcccc
Q 009130 307 AAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSI-WNFFGRFGA 384 (543)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i-~~~ig~~~~ 384 (543)
....+..+......+++++||.|....+...+......++..+.|.|++. ++.++++++.+.....+ +.++|.+++
T Consensus 285 --~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llG 362 (539)
T PF03137_consen 285 --KSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLG 362 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheE
Confidence 00001122334567889999999999998888877788889999999975 69999999998876655 677899999
Q ss_pred ccchhhhhhhcCCCchHHHHHHHHHHHHH---HHHHhhc--------Ccc------------------------------
Q 009130 385 GYGSDVFLHKLGWARPIFMVITLVAMSIG---HIAIASG--------FPG------------------------------ 423 (543)
Q Consensus 385 G~lsD~~~~~~~~~r~~~~~~~~~~~~i~---~~~~~~~--------~~~------------------------------ 423 (543)
|++..|+.-+.+ +-.+...+..++..+. .+++..+ .++
T Consensus 363 G~ivkk~kl~~~-~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G 441 (539)
T PF03137_consen 363 GYIVKKFKLSAR-GAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPG 441 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEecCcHH-HHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCC
Confidence 999999864421 1111111122221111 1111000 000
Q ss_pred --------hHHHH---HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 424 --------NLFVG---TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 424 --------~~~~~---~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.++.. .++.-+..+........++-...++++|+.+.|+..+...+-+.+=+|+++|.+.|.+-
T Consensus 442 ~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 442 KCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 01111 11111222222233334556788999999999999766665555788999999999763
No 120
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.47 E-value=6.7e-13 Score=137.00 Aligned_cols=173 Identities=17% Similarity=0.147 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
+.++...+..++.......+...+|.+.+++|+|+++.++..+.+.++..+++++.|++.||+++| +.+.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r------~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR------YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc------hhHHHHHH
Confidence 334444444444444444566778899999999999999999999999999999999999999654 57777777
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 409 AMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 409 ~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+..++.++.. .++...+++..++.|++.|..++....++.|.+|+++++++.|+.+.+..+|.. ++|.+.+.+.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA-LIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccc
Confidence 7777776665 445555666677788888888888888999999999999999999999999984 88888999988776
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
|++.|++.++..++..++..+
T Consensus 176 ------------w~~~f~~~~i~~~~~~~~~~~ 196 (434)
T PRK11663 176 ------------WRYGMMIAGIIAIVVGLFLCW 196 (434)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999887766655444333
No 121
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.45 E-value=2.1e-12 Score=131.00 Aligned_cols=176 Identities=12% Similarity=0.136 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
+.++.+.+..+............+|.+.+++|++.++.++..+...++..+++++.|++.||++|| +.+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK------HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH------HHHHHHHH
Confidence 456666666666666666777788999999999999999999999999999999999999999654 67777887
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 409 AMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 409 ~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+.+++.++.. .++...+++..++.|++.+...+....++.|.+++++++.+.|....+..++. .++|++.+.+.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVAN-LLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHH-HHhccHHHHHhhhcc
Confidence 7777777665 45667788888999999998888888889999999999999999988888888 478888888888776
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|+..|++.++..++..+......+
T Consensus 156 ------------wr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 156 ------------WRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988776666554443333
No 122
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.44 E-value=2.8e-12 Score=130.19 Aligned_cols=161 Identities=11% Similarity=0.174 Sum_probs=133.0
Q ss_pred hhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcc
Q 009130 345 GIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPG 423 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~ 423 (543)
........|.+.+++|.|+++.++..+.+.++..++.++.|+++||++|| +.+..+.++..++.+... .++..
T Consensus 21 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r------~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 21 IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR------PVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh------HHHHHHHHHHHHHHHHHHHHccHH
Confidence 34455667888889999999999999999999999999999999999654 677777777777766655 45556
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
.+++..++.|++.+...+...+++.|.+|+++++++.|+.+....++. .++|.+.+.+.+..+ |+..
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~------------~~~~ 161 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAP-AVAPLLGGYILVWLS------------WHAI 161 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcC------------HHHH
Confidence 677778899999998888899999999999999999999999999998 488889999888776 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 009130 504 FMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|++.++..++..++..+..++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 998888777776665554443
No 123
>PRK03545 putative arabinose transporter; Provisional
Probab=99.43 E-value=3.9e-12 Score=129.48 Aligned_cols=174 Identities=9% Similarity=0.129 Sum_probs=137.4
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM 410 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~ 410 (543)
++.+.+..++.....+.....+|.+.+++|.|+++.++..+.+.++..++.+..|+++||++|| +++..+.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~ 84 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR------KLLIGLFVLF 84 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH------HHHHHHHHHH
Confidence 4444444444322233344457888899999999999999999999999999999999999654 6777788777
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 411 SIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 411 ~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
.++++... .++.+.+++..++.|++.+...+...+++.|.+|+|+|+++.|+...+..+|. .++|++.+.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~-~ig~~l~~~l~~~~g-- 161 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAM-VLGLPLGRVIGQYLG-- 161 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHH-HHHhhHHHHHHHHhc--
Confidence 77776665 45666777788888998888788888899999999999999999999999998 488888998888776
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 490 EDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 490 ~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|++.|++.+++.++..+......+
T Consensus 162 ----------w~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 162 ----------WRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988877766655444333
No 124
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.43 E-value=4.9e-12 Score=126.94 Aligned_cols=158 Identities=8% Similarity=-0.012 Sum_probs=111.5
Q ss_pred cccchhhHHHHHHHHHHHHHcCCcc--ccccccHHHHh-hcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccc
Q 009130 6 RLSTNSKWIATVASIWIQCSVGTTY--TFSIYSSTLKS-TQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHH 81 (543)
Q Consensus 6 ~~~~~~~w~~~~~~~~~~~~~g~~~--~~~~~~~~l~~-~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~ 81 (543)
.+.++.+|..+.++.+.++..+..+ .....-|++++ |.+-+++..|++.....++-. ..+..|.-..|.+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~------ 99 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTG------ 99 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccC------
Confidence 3455667777766666665544322 12334466665 677778888877666666665 6777877777765
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhh-hcCCCCcchh
Q 009130 82 QTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVM-NFGHYSGTIV 160 (543)
Q Consensus 82 ~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~-~fp~~rg~~~ 160 (543)
+ .|+.++.|.+++.+|.++- ++.....++ .-+.+++.|++.|+|.|.... .-.++++ -.+++|-+++
T Consensus 100 --~------~k~Pli~s~ii~~~g~llY-~~l~~~~~~--~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~ 167 (488)
T KOG2325|consen 100 --S------VKKPLIVSFLIAIIGNLLY-LALAYVPNG--VKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAF 167 (488)
T ss_pred --C------cccCHHHHHHHHHHHHHHH-HHHHhcccc--hHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHH
Confidence 1 3888999999999999983 232344443 378889999999999887644 5556665 4468999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHh
Q 009130 161 GILKGFVGLSGAVLTQVYKTV 181 (543)
Q Consensus 161 gi~~~~~~lg~~i~~~l~~~l 181 (543)
+....+..+|.++||.+...+
T Consensus 168 a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 168 AATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHhhhHHHHHHHHhHHHHHHH
Confidence 999999999999998776554
No 125
>PRK10504 putative transporter; Provisional
Probab=99.43 E-value=2.8e-12 Score=134.09 Aligned_cols=176 Identities=14% Similarity=0.192 Sum_probs=144.7
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
+.+|.+++..++.......+..++|.+.+++|.++.+.++..+.+.++..++.++.|+++||++|| +.+..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r------~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR------NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH------HHHHHHHH
Confidence 457777777777766666778889999999999999999999999999999999999999999654 55666666
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 409 AMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 409 ~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+..++.+... .++...+++..++.|++.+...+....++.|.+|++++++++|+......+|. .++|.+.|.+.|..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGP-LLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhhcc
Confidence 6666655544 44556677788899999999888888999999999999999999999988998 589999999998876
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|++.|++...+..++.++.....+
T Consensus 163 ------------w~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 163 ------------WHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988777777666555443
No 126
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.42 E-value=4.4e-12 Score=129.91 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=137.9
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM 410 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~ 410 (543)
+...++.+++............|.+.+++|.+.++.++..+.+.++..++.+..|+++||+||| +.+..+.++.
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r------~~~~~~~~~~ 83 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR------RWIAGIMVLW 83 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH------HHHHHHHHHH
Confidence 3344444444444444455556777788999999999999999999999999999999999654 6777777777
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 411 SIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 411 ~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
.++.++.. .++...+++..++.|++.+...+....++.|.+|+++|+++.|+.+....+|. ++++.+.+++.+..+-
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~- 161 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTM-ALGLILSGYILALDGL- 161 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCC-
Confidence 77776665 46667788889999999999888888889999999999999999999999988 4788888887643100
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 490 EDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 490 ~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
....+||+.|++.++..++..++..+..+++
T Consensus 162 -----~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~ 192 (412)
T TIGR02332 162 -----MALKGWQWLFLLEGFPSVILGVMTWFWLDDS 192 (412)
T ss_pred -----CCccchhHHHHHHHHHHHHHHHHHhhccCCC
Confidence 0012499999998877766655555444443
No 127
>PRK10054 putative transporter; Provisional
Probab=99.42 E-value=3.6e-12 Score=129.76 Aligned_cols=174 Identities=14% Similarity=0.088 Sum_probs=132.8
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL 407 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~ 407 (543)
++++.+.+..++..........++|.+++ ++|+|+.+.++..+...+...+++++.|+++||+++| +.+.++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k------~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK------RYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc------hhHHHHH
Confidence 44677777777776666667777887775 5799999999999999999999999999999999654 5666676
Q ss_pred HHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 408 VAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 408 ~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
+...++.+.+. .++.+.+++...+.|.+.+...+....+..|.+|+++++++.|+......+|. .++|.+.+.+.+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~-~igp~l~~~l~~-~ 158 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGW-TVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-h
Confidence 66666666555 34444444445566666666667778888999999999999999999889988 488988888875 4
Q ss_pred cCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 487 ASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 487 g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
+ |+..|++.+++.+++.++..+..
T Consensus 159 g------------~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 159 S------------INLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHH
Confidence 4 88999988877777655544433
No 128
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.42 E-value=5.1e-12 Score=128.63 Aligned_cols=154 Identities=10% Similarity=0.172 Sum_probs=129.9
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
..+.....+|.+.+++|.++++.++..+...++..+++++.|+++||++|| +.+..+.++.+++.+... .++.
T Consensus 35 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~ 108 (394)
T PRK10213 35 VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR------YVVILFAVLLTLSCLLVSFANSF 108 (394)
T ss_pred HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH------HHHHHHHHHHHHHHHHHHHHChH
Confidence 334445567888899999999999999999999999999999999999654 677788888777766655 4566
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
+.+++..++.|++.+...+....++.|.+|+|+++.+.++...+..++. .++|.+.+.+.+..+ |+.
T Consensus 109 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~~~l~~~~g------------w~~ 175 (394)
T PRK10213 109 SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIAL-VIAAPLGSFLGELIG------------WRN 175 (394)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcC------------HHH
Confidence 7788888999999999889999999999999999999999999999988 589999999998876 999
Q ss_pred HHHHHHHHHHHHHH
Q 009130 503 SFMIMAFVAFFGSL 516 (543)
Q Consensus 503 ~f~~~~~~~~~~~i 516 (543)
.|++.+.+.++..+
T Consensus 176 ~f~~~~~l~~~~~l 189 (394)
T PRK10213 176 VFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988766555443
No 129
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=9.5e-13 Score=127.44 Aligned_cols=177 Identities=17% Similarity=0.098 Sum_probs=144.4
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
+-|..+++.+......--.+....|.+.++.++|.+|.+.+.+.+.++..++.++.|.++||.+. +..+..+++
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np------r~fm~~gLi 102 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP------RYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC------ceeehHHHH
Confidence 34455555554444444456667788888899999999999999999999999999999999954 468888999
Q ss_pred HHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh--hhhhhh
Q 009130 409 AMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII--GRIYDR 485 (543)
Q Consensus 409 ~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~--g~l~~~ 485 (543)
+.++..+++.+ ++...+.+...+.|+..|..++...-.+..-|++++||+..++.+++.++|+. +.|++. +++.++
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa-l~~~~~~la~~~~~ 181 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA-LAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc-hHHHHHHHHHHHhc
Confidence 99999988884 34455666777889999999999999999999999999999999999999996 555667 777776
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 486 VASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 486 ~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.+ |+.+|++-+++.++..++.+++.+.
T Consensus 182 ~~------------w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 182 GG------------WRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred cc------------hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 65 9999999998888777776666554
No 130
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.41 E-value=1.5e-12 Score=130.27 Aligned_cols=165 Identities=19% Similarity=0.231 Sum_probs=134.3
Q ss_pred HHhhhchhhhhhhchH-HHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Q 009130 338 TLCGMGSGIATMNNIA-QVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA 416 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~-~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~ 416 (543)
.++...........+| .+.+++|.|+.+.++..+...++..++.++.|+++||+||| +.+..+.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR------RVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe------eeEeehhhhhhhHHHH
Confidence 3333344444555667 56678899999999999999999999999999999999654 6788888888777444
Q ss_pred Hhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccc
Q 009130 417 IAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCY 495 (543)
Q Consensus 417 ~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~ 495 (543)
... .+.+.+++..++.|++.+...+....++.|.+|+|+|+++.|+......+|. +++|.+.+.+.+..+
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~~-------- 149 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGS-ILGPLLGGFLISYFG-------- 149 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHCH--------
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhh-hcccchhhhhhhccc--------
Confidence 433 5555778888899999999999999999999999999999999999999998 588999999987776
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 496 GTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 496 ~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
|+..|++.+++.++..++...+
T Consensus 150 ----~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 150 ----WRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp ----HCCHHHHHHHHHHHHHHHHHCC
T ss_pred ----cccccccccchhhhhhhhHhhh
Confidence 9999999999888887754333
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=7.6e-12 Score=134.61 Aligned_cols=185 Identities=12% Similarity=0.077 Sum_probs=132.1
Q ss_pred cchhHHHHHHHHHhhhchh----hhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 327 CTGNFWFLCIATLCGMGSG----IATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 327 ~~~~f~~~~l~~~~~~~~~----~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
..+..|.+.+..++..... ..+...+|.+..+.|.+..+.+++.+.+.++.++|.+++|+++||+||| +.
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR------~~ 234 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK------QC 234 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HH
Confidence 3455565554443332221 1234446777778899999999999999999999999999999999654 66
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGR 481 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~ 481 (543)
+.++.++..++.++.. .++...+++..++.|++.++..+..++++.|.+|+++|+...+++.+...+|.. +++.+...
T Consensus 235 lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i-la~~la~~ 313 (742)
T TIGR01299 235 LLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI-YAAAMAWA 313 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 6667766666665554 456667788899999999999999999999999999999999999988888884 66666655
Q ss_pred hhhhccCCC-CccccccchhHHHHHHHHHHHHHHHHHH
Q 009130 482 IYDRVASGE-DHTCYGTHCFMLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 482 l~~~~g~~~-~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 518 (543)
+....|... .+..+...+|+..+++.++..++..++.
T Consensus 314 il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 314 IIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred HHHhccchhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 554332100 0111233469998888776665554443
No 132
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.39 E-value=3.3e-12 Score=128.42 Aligned_cols=169 Identities=11% Similarity=-0.036 Sum_probs=132.5
Q ss_pred HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 334 LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
+....++...........+|.+..+.+.++.+.++..+...++..++.++.|+++||++|| +.+..+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r------~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK------KVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh------HHHHHHHHHHHHH
Confidence 3444444444444455667888888999999999999999999999999999999999654 5666666655554
Q ss_pred HHHHh-hc-----CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 414 HIAIA-SG-----FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 414 ~~~~~-~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
..+.. .. +.+.+++..++.|++.+...+...+++.|.+|+++|+++.|.......+|. +++|.+.+.+.+..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~g 156 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFY-IVGPGIGGLMYATLG 156 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHhh
Confidence 44333 22 556677788888999998888899999999999999999999999999998 589989999988876
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
|+..|++.++..+++.++...+
T Consensus 157 ------------~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 157 ------------IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988877666665544443
No 133
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.38 E-value=4e-12 Score=132.27 Aligned_cols=172 Identities=17% Similarity=0.183 Sum_probs=140.2
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHh---hCCCchhhHHHHHHHHHHHhhhccccccchhh-hhhhcCCCchHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGES---LHYSTTEINSLISLWSIWNFFGRFGAGYGSDV-FLHKLGWARPIFMV 404 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~-~~~~~~~~r~~~~~ 404 (543)
+.+|.+.+..++....++....++|.|+++ +|++..+++...+.+.++..++++++|+++|| +||| +++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~------~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK------KTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH------HHHH
Confidence 345666666666667777888889999865 79999999999999999999999999999999 7554 6888
Q ss_pred HHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc---hhhHHHHHHhhhhhhhhhhhhhhhh
Q 009130 405 ITLVAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH---MGTIFNTISIACPVGSYICSVRIIG 480 (543)
Q Consensus 405 ~~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~ig~~i~~~~l~g 480 (543)
++.++.+++.+++.. .+...+++...+.|++.|...+...++++|.+|+++ ++.++++.+.+.++|. +++|.+.+
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~-~ig~~l~g 162 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGS-FISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHH-HHHHHHHH
Confidence 888888888777764 344556667778899998888889999999998764 8889999999999998 48999999
Q ss_pred hhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHH
Q 009130 481 RIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAF 519 (543)
Q Consensus 481 ~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 519 (543)
++.+..+ |+..|++.++.++++.+..+
T Consensus 163 ~l~~~~g------------~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 163 VIAENYG------------YHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHhcC------------hHHHHHHHHHHHHHHHHHHH
Confidence 9998776 99999988866666554433
No 134
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.37 E-value=2.5e-12 Score=130.69 Aligned_cols=158 Identities=16% Similarity=0.187 Sum_probs=130.2
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
.+....|.+.+++|.++.+.++..+...++..++.++.|+++||+||| +.+..+.++..++..+.. .++...+
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR------KTLAVFIVIWGVFTGLQAFAGAYVSL 85 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc------eeeHHHHHHHHHHHHHHHHHcCHHHH
Confidence 344556777788999999999999999999999999999999999755 456666666666666555 4566677
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+...+....++.|.+|+|+|+++.|+......+|. +++|.+.+.+.+..+ |+..|+
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~------------~~~~~~ 152 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGG-IIGGPLVGWILIHFS------------WQWAFI 152 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHhCC------------chHHHH
Confidence 8888999999999999999999999999999999999999999998 488888998888776 999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009130 506 IMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~ 523 (543)
+.++..++..++.++..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHHHHHHHhhheec
Confidence 888777776665554443
No 135
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=9.1e-12 Score=128.79 Aligned_cols=179 Identities=16% Similarity=0.082 Sum_probs=127.6
Q ss_pred cchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 327 CTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 327 ~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
+++.++...+...........+....|.+. +.|+|+++.++..+.+.++..++.++.|+++||+++| +.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~------~~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR------VFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc------eehHHH
Confidence 344455554444443333333444455544 5699999999999999999999999999999999754 456666
Q ss_pred HHHHHHHHHHHhh-----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHIAIAS-----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGR 481 (543)
Q Consensus 407 ~~~~~i~~~~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~ 481 (543)
.++.+++.++... .+...+++..++.|++.+..++.....+.|.+|+++|+++.|+.+.+..+++. ++|.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG-IPPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH-HHHHHHHH
Confidence 6666666555432 12233455667788888887777888889999999999999999999888885 66666665
Q ss_pred hhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 482 IYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 482 l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
..+... +|+..|++.++++++..++.+++.++
T Consensus 177 ~~~~~~-----------~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 177 GMAWFN-----------DWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHHhh-----------hhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 554332 29999999888887766665555443
No 136
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.37 E-value=8.1e-12 Score=131.11 Aligned_cols=174 Identities=10% Similarity=0.019 Sum_probs=140.5
Q ss_pred HHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 009130 332 WFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMS 411 (543)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~ 411 (543)
..+++..++...-.......+|.+.+++|.+.++.++..+.+.++..++.+..|+++||+||| +.+..+.++..
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk------~~l~~~~~~~~ 82 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK------RLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHH
Confidence 344444555544455566678999999999999999999999999999999999999999654 78888888888
Q ss_pred HHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhc-CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 412 IGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIF-GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 412 i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
++.++.. .++.+.+++..++.|++.+...+.....+.+.+ |+++|+++.|+......+|. .++|.+.|.+.+..+
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~-~~gp~lgg~l~~~~g-- 159 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGA-AFGPLVGGILLEHFY-- 159 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC--
Confidence 8877766 466677888889999998887777777776766 67899999999999999998 589999999999876
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 490 EDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 490 ~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|++.|++...+.++..++..+..++
T Consensus 160 ----------wr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 160 ----------WGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999887777776665555443
No 137
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.37 E-value=3.2e-11 Score=125.83 Aligned_cols=168 Identities=10% Similarity=0.123 Sum_probs=117.3
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
..+......|.+.+++|++.++.++..+.+.++..++.++.|+++||+|+| +++..+.+...++.++.. ..+.
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r------~~~~~~~~~~~~~~~~~~~~~s~ 124 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR------YGSAFLLMLTAPAVFCMSLVSSA 124 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhcCH
Confidence 334455566778888999999999999999999999999999999999654 566666666666666555 3455
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
..+++..++.|++.+... ....++.|.+|+++|+.+.|+.+....+|.. +++.+.+.+.+...... +.+..+||+
T Consensus 125 ~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~-~~~~~~~~i~~~~~~~~---~~~~~gWr~ 199 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGG-VTQLLMPLVFPLIKDAG---APSFTAWRI 199 (476)
T ss_pred HHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC---CcchhhhHH
Confidence 566667778888877543 3455788999999999999998766666653 44444444332110000 001125999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 009130 503 SFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~ 522 (543)
.|++.+++.++..++.+++.
T Consensus 200 ~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 200 AFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999888777666655543
No 138
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.37 E-value=5.1e-12 Score=132.60 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=139.8
Q ss_pred HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 334 LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
+.+..++............|.+.+++|.++.+.++..+.+.++..++.++.|+++||+||| +.+..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR------RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH------HHHHHHHHHHHHH
Confidence 3334444434444456667888899999999999999999999999999999999999654 6777788887777
Q ss_pred HHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCc
Q 009130 414 HIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDH 492 (543)
Q Consensus 414 ~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~ 492 (543)
.++.. .++...+++..++.|++.+...+...+++.|.+|+++|+++.|+......+|. .++|.+.+++.+..+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~----- 154 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAP-ALGPTLGGWIIENYH----- 154 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh-hhhhccHhHhccCcC-----
Confidence 77666 45666778888899999998888899999999999999999999999999998 488999999988776
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 493 TCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 493 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|++.|++.+.+.++..++..+..++
T Consensus 155 -------w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 155 -------WRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred -------ceehhhhhhHHHHHHHHHHHHHcCC
Confidence 9999998887777766665555443
No 139
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.36 E-value=1.5e-11 Score=125.23 Aligned_cols=164 Identities=12% Similarity=0.103 Sum_probs=131.6
Q ss_pred chhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC
Q 009130 343 GSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGF 421 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~ 421 (543)
.........+|.+.+++|.|+.+.++..+.+.++..++.++.|+++||++|| +.+..+.+...++..... .++
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK------PVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhCc
Confidence 3334455678888899999999999999999999999999999999999654 677777777777766655 345
Q ss_pred cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhH
Q 009130 422 PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFM 501 (543)
Q Consensus 422 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~ 501 (543)
...+++..++.|++.+...+...+++.|.+++++|+++.|..+....++. +++|.+.+.+.+..+ |+
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~-~~~~~i~~~l~~~~g------------~~ 157 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIP-VLAPVLGHLIMLKFP------------WQ 157 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcC------------hH
Confidence 55667777888998888888888999999999999999999988888887 478888888777665 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 502 LSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
..|++.+++.++..++.+...+++
T Consensus 158 ~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 158 SLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999998887777776655554443
No 140
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=2.1e-11 Score=124.86 Aligned_cols=159 Identities=15% Similarity=0.123 Sum_probs=125.6
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
......|.+.+++|.++++.++..+...++..++.++.|+++||+||| +.+..+.++..++.++.. ..+...+
T Consensus 33 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (406)
T PRK11551 33 SAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK------RILIVSVALFGLFSLATAQAWDFPSL 106 (406)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------hhHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344456778888999999999999999999999999999999999654 566666666666555444 4566667
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
.+..++.|++.+...+...+++.|.+|+++++++.|+.+....+|.. +++.+.+.+.+..+ |+..|+
T Consensus 107 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~~~~~~ 173 (406)
T PRK11551 107 LVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGA-LASVIGVLAAGDAA------------WRHIFY 173 (406)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccccC------------HHHHHH
Confidence 77888999999988888899999999999999999999998888884 77777777766655 999998
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 009130 506 IMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~~ 524 (543)
+.+++.++..++.....++
T Consensus 174 ~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 174 VGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 8776666555544443333
No 141
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=2.7e-11 Score=123.82 Aligned_cols=167 Identities=17% Similarity=0.214 Sum_probs=129.9
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM 410 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~ 410 (543)
+...++..+.............|.+.+++|.++.+.++..+...++..++.++.|+++||+||| +.+..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~~~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR------LPMVTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHH
Confidence 3344444444444444455666778888999999999999999999999999999999999654 5666777777
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 411 SIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 411 ~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
.++.++.. .++...+++..++.|++.+...+...+++.|.+|+++++.+.|+...+..+|. ++++.+.+.+.+..+.
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~- 165 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGA-VVAAQVYSLVVPVWGD- 165 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCc-
Confidence 76666555 45666677788899999999888889999999999999999999999999998 4788888887776431
Q ss_pred CCccccccchhHHHHHHHHHHHHHH
Q 009130 490 EDHTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 490 ~~~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
+|+..|++.++..++.
T Consensus 166 ---------~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 166 ---------GWRALFFISILPIIFA 181 (405)
T ss_pred ---------cHHHHHHHHHHHHHHH
Confidence 3898888765544444
No 142
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=7.2e-12 Score=127.60 Aligned_cols=159 Identities=15% Similarity=0.142 Sum_probs=128.0
Q ss_pred hhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 009130 346 IATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGN 424 (543)
Q Consensus 346 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~ 424 (543)
.......|.+.+++|.++.+.+++.+...++..++.++.|+++||++|| +.+..+.++..++.++.. .++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK------RVLLWSILLFSVFTLLCALATNVTQ 107 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHccchHH
Confidence 3445567778888999999999999999999999999999999999654 667777777666666555 445556
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
+++..++.|++.+...+...+++.|.+|+++++++.|+......+|. .++|.+.+.+.+..+ |+..|
T Consensus 108 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~g------------~~~~~ 174 (398)
T TIGR00895 108 LLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGA-AVGGFLAGWLIPVFG------------WRSLF 174 (398)
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHH-HHHHHHHHHHhhccc------------ceeeh
Confidence 77778889999998889999999999999999999999999999998 488888889888776 88888
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 009130 505 MIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~~ 523 (543)
++.+++..+..++.....+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 175 YVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred hhhhhHHHHHHHHHHHhCC
Confidence 8876555555554444433
No 143
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.34 E-value=2.1e-11 Score=124.93 Aligned_cols=162 Identities=13% Similarity=0.081 Sum_probs=130.0
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
........+|.+.+++|.+.++.++..+++.++..++.+++|+++||+||| +++..+.++..++.++.. .++.
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr------~~l~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR------PVLITGALIFTLACAATLFTTSM 104 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch------HHHHHHHHHHHHHHHHHHHcCCH
Confidence 334456667788888999999999999999999999999999999999654 677777777777766655 4566
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
..+++..++.|++.+...+....++.|.+++++++++.++......++. .++|.+.+.+.+..+ |++
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~lg~~l~~~~g------------w~~ 171 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAP-IIGPLSGAALMHFVH------------WKV 171 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcC------------HHH
Confidence 6778888899998776556666788899999999999999999999998 488888888887766 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 009130 503 SFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.|++.++..+++.+..++..++
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999888777776654443344
No 144
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.33 E-value=1.8e-11 Score=128.20 Aligned_cols=179 Identities=15% Similarity=0.150 Sum_probs=135.8
Q ss_pred HHhhcch-hHHHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhh-hhhhcCCCc
Q 009130 323 LQAMCTG-NFWFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDV-FLHKLGWAR 399 (543)
Q Consensus 323 ~~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~-~~~~~~~~r 399 (543)
.+.+++| .+|..+...++....++.+..+++.++ +++|++.++++...+.+........+++|+++|| +|||
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r----- 88 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK----- 88 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----
Confidence 3445666 488877777777777778888888887 5689999998888877776666666789999999 5654
Q ss_pred hHHHHHHHHHHHHHHHHHhh-c-CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc--hhhHHHHHHhhhhhhhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIAS-G-FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH--MGTIFNTISIACPVGSYICS 475 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~ig~~i~~ 475 (543)
+.+..+.++..++..++.. . +...+++..++.|++.|...+...+++.|.+|+++ +..++++.+.+.++|+ .++
T Consensus 89 -~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~-~~g 166 (500)
T PRK09584 89 -RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS-FFS 166 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH-HHH
Confidence 6777788887777666653 2 23345556678888888888888889999998654 4567888889999998 489
Q ss_pred hhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 476 VRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 476 ~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
|.+.|++.|..| |++.|++.++..+++.+..++
T Consensus 167 p~i~g~l~~~~g------------~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 167 MLATPWLAAKYG------------WSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHHHHHhhC------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999877 999999887766666544333
No 145
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.33 E-value=5.1e-11 Score=121.51 Aligned_cols=174 Identities=10% Similarity=0.131 Sum_probs=132.6
Q ss_pred HHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 009130 332 WFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMS 411 (543)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~ 411 (543)
+......++...........+|.+.+++|.|+.+.++..+...++..++.++.|+++||++|| +.+..+.+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr------~~~~~~~~~~~ 84 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR------PVILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh------HHHHHHHHHHH
Confidence 333344444444444455667888899999999999999999999999999999999999654 56666776666
Q ss_pred HHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC
Q 009130 412 IGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE 490 (543)
Q Consensus 412 i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~ 490 (543)
++.+... .++...+++..++.|++.+...+....+..|.+++++++.+.+..+++..++. .++|.+.+.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~g--- 160 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP-LLAPLIGGLLTTLFG--- 160 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccC---
Confidence 6665544 44556677778888988887777777788899998999999999998888888 588888998888766
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 491 DHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 491 ~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|+..|++.++..++..++..+..+|
T Consensus 161 ---------~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 161 ---------WRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999998877666555444444343
No 146
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=2.1e-11 Score=124.34 Aligned_cols=173 Identities=9% Similarity=0.103 Sum_probs=132.7
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
+.+|..++.+++.......+-..+|.+.+++|+|.++.++..+...++..++.++.|++.||++|| +.+..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r------~~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK------RQLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH------HHHHHHHH
Confidence 345555555555544445566667888899999999999999999999999999999999999665 56777777
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 409 AMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 409 ~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+..++.++.. .++...+++..++.|++.+...+....++.|.+|+++|+.+.+..+....+++. ++|.+.+.+.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGM-IFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccc
Confidence 7777666555 345556677788889988888888888999999999999999988877778774 67777777765432
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHH
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAF 519 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 519 (543)
+|+..|.+.++..++..++.+
T Consensus 160 -----------gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 160 -----------EWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHH
Confidence 399999988776666554433
No 147
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.33 E-value=2e-11 Score=123.72 Aligned_cols=159 Identities=11% Similarity=0.203 Sum_probs=131.8
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
.+...+|.+.+++|.|+++.++..+...++..+++++.|+++||++| ++.+..+.++..++..++. .++...+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~------~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGR------KPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCC------hHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 34567888899999999999999999999999999999999999964 4677777777777766655 4555667
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+...+...+++.|.+++++++++.|+......+|. .++|.+.+.+.+..+ |+..|+
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~------------~~~~~~ 149 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAP-LLAPIIGGWLLVWFS------------WHAIFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcC------------hHHHHH
Confidence 7778888999888888888999999999999999999999888888 488889999988776 999999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 009130 506 IMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~~ 524 (543)
+.+...++..++..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 150 VLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHhCCc
Confidence 8888777776665544443
No 148
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=4.7e-11 Score=122.30 Aligned_cols=175 Identities=15% Similarity=0.080 Sum_probs=131.4
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchh-----hHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTE-----INSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMV 404 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~ 404 (543)
.+...++..++...........+|.+.+++|.+..+ .+...++..+...++.++.|+++||++|| +.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~ 88 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK------IMLL 88 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH------HHHH
Confidence 344444555554444445666788899999988655 37788899999999999999999999654 5666
Q ss_pred HHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhh
Q 009130 405 ITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIY 483 (543)
Q Consensus 405 ~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~ 483 (543)
.+.+...++..++. .++.+.+++..++.|++.+ ..+.....+.+.+++++++.+.|+......+|. +++|.+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~l~ 166 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGA-LLGPLAGGLLA 166 (408)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 67766666665554 3455667777778888654 456666788899999999999999998888888 58888999998
Q ss_pred hhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 484 DRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 484 ~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
+..+ |+..|++.+++.++..+...+..++
T Consensus 167 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 167 DSYG------------LRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred HHhC------------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8776 9999999888777776665554443
No 149
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=2.4e-11 Score=122.09 Aligned_cols=158 Identities=13% Similarity=0.053 Sum_probs=122.9
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~ 425 (543)
.+...+|.+.+|+|.|+++.+++.+.+.++..++++..|+++||+||| +++.........+...... ++...+
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR------WFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch------HHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 455677888899999999999999999999999999999999999754 4444444333333322232 466678
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+.. ......++|.+|+|+|+++.++...+..+|.. +++.+.+.+.+..| ||..|+
T Consensus 83 ~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~-l~~~~~~~l~~~~g------------Wr~~f~ 148 (368)
T TIGR00903 83 LACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGII-FALAAGLKIYTAGG------------LQLLII 148 (368)
T ss_pred HHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccc------------hHHHHH
Confidence 88899999998864 44445568999999999999999999999984 78888888887766 999999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 009130 506 IMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~~ 524 (543)
+.+++.++..++..+..++
T Consensus 149 ~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 149 PIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9888777776665555544
No 150
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.31 E-value=3.6e-11 Score=123.52 Aligned_cols=173 Identities=16% Similarity=0.231 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhh-hhhcCCCchHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVF-LHKLGWARPIFMVIT 406 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~-~~~~~~~r~~~~~~~ 406 (543)
+.++..+.........++.+..++|.++++ +|+++.+++...+.+.....++.+++|+++||+ ||| +.+.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr------r~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR------MAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH------HHHHHH
Confidence 445666666555566677788888888765 699999999999999999999999999999999 765 567778
Q ss_pred HHHHHHHHHHHhhc--CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCc--chhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHIAIASG--FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVR--HMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 407 ~~~~~i~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
.++..++.+++... +....++...+..++.|...+..+++++|.+|++ +|.+++++.....++|+ .++|.+.|++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~-~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGS-IIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHH-HHHHHHHHHH
Confidence 88888777665532 2233444444555667776677788999999976 68999999988888998 5899999999
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
.+..| |+..|.+.++.++++.+..+.
T Consensus 162 ~~~~G------------w~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 162 QEEYS------------WAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HhhhC------------hHHHHHHHHHHHHHHHHHHHH
Confidence 88776 999999877766666555433
No 151
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.31 E-value=7.6e-11 Score=119.83 Aligned_cols=190 Identities=12% Similarity=0.111 Sum_probs=128.5
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
+|.++...+.++.....-+.+....+.+.+ ++|+|++|.+++.++..+...++++..|++.||+|.| +++.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R------~v~~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR------RWTVFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHH
Confidence 356776666665554444444444555555 6899999999999999999999999999999999754 456666
Q ss_pred HHHHHHHHHHHhh------cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhh---hhhhh
Q 009130 407 LVAMSIGHIAIAS------GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSY---ICSVR 477 (543)
Q Consensus 407 ~~~~~i~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~---i~~~~ 477 (543)
.++..+..+.... ++...+++..++.|++ +..++.....+++.||++++|++.|+....+.+|.. ++.|.
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 6666666555442 3555677888899997 777888888999999999999999999544444442 23333
Q ss_pred hhh-hhhhhccCCCCccccc-cchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 478 IIG-RIYDRVASGEDHTCYG-THCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 478 l~g-~l~~~~g~~~~~~~~~-~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
+.+ .+.+..|........| ..+++.+.++...+.++..++.++..++
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 332 2334333211111111 3358888888888777777776665443
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=4.6e-12 Score=128.07 Aligned_cols=162 Identities=20% Similarity=0.197 Sum_probs=128.2
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
....+....|.+.+++|.|+.+.+++.+...++..++.++.|+++||++|| +.+..+.++..++.++.. .++.
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR------VFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe------ehhHHHHHHHHHHHHHHHHhhhH
Confidence 334455567777788899999999999999999999999999999999654 567777777777766655 4556
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh-hhhhhhhhhccCCCCccccccchhH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV-RIIGRIYDRVASGEDHTCYGTHCFM 501 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~-~l~g~l~~~~g~~~~~~~~~~~~~~ 501 (543)
..+++..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|.. ++| .+.+.+.+..+ |+
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~------------~~ 150 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGG-LLPPLVLFGIAELYS------------WH 150 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHH-HHHHHHHHHHHhcCC------------ch
Confidence 66777888889999988889999999999999999999999999999884 677 45555555554 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 009130 502 LSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
..|++.+++.++..++.++..++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred hHHHHHHHHHHHHHHHHheeeCC
Confidence 99988887776665555544433
No 153
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.31 E-value=1.2e-11 Score=127.16 Aligned_cols=179 Identities=13% Similarity=0.063 Sum_probs=134.5
Q ss_pred HHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 323 LQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 323 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
+...+++.++.+.+..++...........+|.+.++.+.++.+.++..+...++..++.++.|+++||++|| +.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~------~~ 84 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRK------KL 84 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCc------eE
Confidence 344568888887777666655555566677888888888999999999999999999999999999999765 33
Q ss_pred HHHHHHHHHHHHHHHh------hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA------SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
+..+.++.+++..... .++...+++..++.|++.+...+...+.+.|.+|+++++++.++......+|. +++|
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~ 163 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS-VISP 163 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH-HhHH
Confidence 4444444443332221 12334455667777888777777778889999999999999999998888988 5899
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
.+.|.+.+..+ |++.|++.+...++..++.+.
T Consensus 164 ~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 164 ALGGLLIAAGG------------VAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHHHh
Confidence 99999988776 888888877766665554433
No 154
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=4.2e-11 Score=122.60 Aligned_cols=160 Identities=10% Similarity=0.028 Sum_probs=126.5
Q ss_pred hhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 009130 346 IATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGN 424 (543)
Q Consensus 346 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~ 424 (543)
..+...+|.+.+++|.|+.+.++..+.+.++..++.++.|+++||++|| +.+..+.+...++.+... .++...
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR------PVMLAGVAFFILTCLAILLAQSIEQ 103 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHccHHH
Confidence 3355567778889999999999999999999999999999999999654 567777766666665554 455566
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
+++..++.|++.+...+...+.+.|.++++++.++.++......++. .++|.+.+.+.+..+ |+..|
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~~------------w~~~~ 170 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAP-LLGPLVGAALIHVLP------------WRGMF 170 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccC------------ccHHH
Confidence 77778888988887777788889999999999999998877777776 588888888888765 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 009130 505 MIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~~~ 524 (543)
++.+++.+++.+......++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 171 VLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 98888777766655444443
No 155
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.31 E-value=3.6e-11 Score=122.90 Aligned_cols=174 Identities=13% Similarity=0.048 Sum_probs=124.1
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVA 409 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~ 409 (543)
.+....+..++..........+++++.+++|.++++.++..+.+.++..++.++.|++.||++|| +.+..+.++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k------~~l~~~~~~ 87 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL------KTMMIGLLL 87 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH------HHHHHHHHH
Confidence 34444444444444444455677888899999999999999999999999999999999999654 667677776
Q ss_pred HHHHHHHH---hh--cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 410 MSIGHIAI---AS--GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 410 ~~i~~~~~---~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
..++.+.+ .. .+...+++..++.|++.+...+.....+.+.+++|+++++.|+......+|..+++|.+.+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 88 WCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66655432 22 23444566677778887776666667788999999999999999988888853477878888887
Q ss_pred hccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 485 RVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 485 ~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
..| ++..++....+..+..++..++
T Consensus 168 ~~g------------~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 168 AFG------------EMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred ccc------------hHHHHHHHHHHHHHHHHHHHhc
Confidence 766 5555555444444444444343
No 156
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=5.1e-11 Score=122.84 Aligned_cols=156 Identities=15% Similarity=0.084 Sum_probs=125.1
Q ss_pred HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 334 LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
..+..+.............|.+.++.|.|+.+.++..+...++..++.++.|+++||+||| +++..+.+...++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r------~~l~~~~~~~~~~ 96 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK------PLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHH
Confidence 3333333333333445556777788999999999999999999999999999999999654 7788888888777
Q ss_pred HHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCc
Q 009130 414 HIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDH 492 (543)
Q Consensus 414 ~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~ 492 (543)
.++.. .++...+++..++.|++.+..++....++.|.+|+|+|+++.|+...+..+|.. +++.+.+.+.+..+
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~l~~~l~~~~~----- 170 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI-IAAYFMPSFAEAYG----- 170 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH-HHHHHHHHHcccCC-----
Confidence 76655 455667788889999999988888899999999999999999999998889984 77777888777665
Q ss_pred cccccchhHHHHHHHH
Q 009130 493 TCYGTHCFMLSFMIMA 508 (543)
Q Consensus 493 ~~~~~~~~~~~f~~~~ 508 (543)
|+..|++..
T Consensus 171 -------w~~~f~i~~ 179 (426)
T PRK12307 171 -------WRAAFFVGL 179 (426)
T ss_pred -------HHHHHHHHH
Confidence 999988754
No 157
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.31 E-value=6.9e-11 Score=120.57 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=133.7
Q ss_pred HHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 009130 332 WFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM 410 (543)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~ 410 (543)
+.+....++.....+.....++.++ +++|.|+.+.++..+...+...+.+++.|+++||+++ |+.+..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~------k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGA------KPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCc------hHHHHHHHHHH
Confidence 3344445555555555666666665 5689999999999999999999999999999999965 46777788887
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCC
Q 009130 411 SIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 411 ~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~ 489 (543)
.++++.+. .++.+.+++..++.|++.+...+...+++.|.+|+|+++++.|+......+|. .++|.+.|.+. ..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~g~l~-~~g-- 162 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGA-VIGALLGSWLL-QYD-- 162 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-Hhh--
Confidence 77777665 45556677778888988877777778889999999999999999999999998 48998999988 445
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 490 EDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 490 ~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
|+..|++.+...++..++.....
T Consensus 163 ----------~~~~f~~~~~~~~~~~i~~~~~~ 185 (400)
T PRK11646 163 ----------FRLVCATGAVLFVLAAAFNAWLL 185 (400)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988877776655544433
No 158
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.30 E-value=2.1e-11 Score=123.09 Aligned_cols=161 Identities=13% Similarity=0.121 Sum_probs=125.8
Q ss_pred hchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc
Q 009130 342 MGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SG 420 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~ 420 (543)
.+..+.+....|.+.+++|.|.++.++..+.+.++..+++++.|+++||+||| +.+..+.++.+++.+... .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r------~~~~~~~~~~~~~~~~~~~~~ 89 (377)
T TIGR00890 16 SGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR------AVAMLGGILYGLGFTFYAIAD 89 (377)
T ss_pred hhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc------chhHHhHHHHHHHHHHHHHHH
Confidence 33345556677888889999999999999999999999999999999999655 566777777777776655 45
Q ss_pred CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 421 FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 421 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
+...+++...+.|++.+..++.....+.+.++ |+|+++.++...+..+|.. +++++.+.+.+..+ |
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~ 155 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSF-ILSPLITSVINLEG------------V 155 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHh-HHHHHHHHHHhccc------------H
Confidence 55667777778899888877777777777776 6799999999999888885 44446666666555 9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 009130 501 MLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
+..|++.+++.++..+..++..
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 156 PAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhe
Confidence 9999998887777766655443
No 159
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.30 E-value=4.9e-10 Score=114.82 Aligned_cols=352 Identities=13% Similarity=0.053 Sum_probs=202.5
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWAS 112 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~ 112 (543)
....|.+++++|++++|++.+.....+.-...++.|.++|.+- +-.+.||+-++++.++.+++....++
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~p----------i~G~rr~~Y~~i~~~~~~~~~~~~~~- 78 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFP----------IFGYRRKPYMIIGWLLGAVSALVLAL- 78 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhccccc----------ccCCcchHHHHHHHHHHHHHHHHHHh-
Confidence 3456899999999999999888888888889999999999985 11223777788888887666555332
Q ss_pred HhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhc---CCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhH
Q 009130 113 VVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNF---GHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTY 189 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~f---p~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~ 189 (543)
...... +.....++-++..+|.......+-....|.- |++||...+.......+|++++..+.+.+.+....++
T Consensus 79 -~~~~~~--s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~ 155 (433)
T PF03092_consen 79 -LPASES--SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQG 155 (433)
T ss_pred -cccccc--hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeE
Confidence 121111 2555666777888899999998888888876 3347888888888888999999888877765443333
Q ss_pred HHHH-HHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhccc
Q 009130 190 ILVL-ALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPL 268 (543)
Q Consensus 190 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (543)
.+.+ +.+|.+..+....+.
T Consensus 156 ~f~i~~~~~~l~~~~~~~~~------------------------------------------------------------ 175 (433)
T PF03092_consen 156 VFLISAALPLLMLIVALFLL------------------------------------------------------------ 175 (433)
T ss_pred EehHHHHHHHHHHHHHHHhh------------------------------------------------------------
Confidence 3322 222222211111110
Q ss_pred ccccccccccccCCCCCCCCCCCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHH-HHHhhhchhhh
Q 009130 269 RVAITADREDAMTSPKLSTPQQDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCI-ATLCGMGSGIA 347 (543)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l-~~~~~~~~~~~ 347 (543)
++.++++ +. +. ....++++. ......++.....++.++++..|...+ ..++......
T Consensus 176 -----~e~~~~~---~~------~~---~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~- 233 (433)
T PF03092_consen 176 -----EERKVRP---AD------EV---FSFGKEEVP----CLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPS- 233 (433)
T ss_pred -----hhccccc---cc------hh---hcccccccc----hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccC-
Confidence 1100000 00 00 000000000 000001223345678888888887666 3222211110
Q ss_pred hhhchHHHH--HhhC---CCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH---Hh-
Q 009130 348 TMNNIAQVG--ESLH---YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA---IA- 418 (543)
Q Consensus 348 ~~~~~~~~~--~~~g---~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~---~~- 418 (543)
.......+. ...+ +|+...+.+..+.+++..+|..+.. ++.++. +-+.++..+.++.++..+. +.
T Consensus 234 ~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~----~~~~~~--~~R~~~~~t~~~~~~~~l~~~~lv~ 307 (433)
T PF03092_consen 234 ISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYR----KYFSNW--SWRRIFVVTTLVSVLASLFDLLLVT 307 (433)
T ss_pred CCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHH----HHHhCC--CHHHHHHHHHHHHHHHhcccEEEEE
Confidence 000000111 1234 8877777777666666666666553 333322 2234555555554443332 10
Q ss_pred -------hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 419 -------SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 419 -------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.++......-.++..+.....+-....+++++.|+..-|+.++++....++|.. ++..+...+.+..+
T Consensus 308 ~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~-~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 308 RWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSS-VSSTLGAFLMELFG 382 (433)
T ss_pred EEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 111222233344555555555555667899999999999999999888888884 66667777777666
No 160
>PRK11043 putative transporter; Provisional
Probab=99.30 E-value=1e-10 Score=119.64 Aligned_cols=157 Identities=13% Similarity=0.160 Sum_probs=124.4
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
.+...+|.+.+++|.++++.++..+++.++..++.++.|+++||++|| +.+..+.++..++.+... .++...+
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK------PVLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc------HHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 344455666788899999999999999999999999999999999654 567777766666665554 4455566
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+...+...+.+.|.+++++++.+.+..+....++. .++|.+.+.+.+..+ |+..|+
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~g------------~~~~~~ 164 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSP-ALAPLLGAWLLNHFG------------WQAIFA 164 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCC------------hHHHHH
Confidence 7777888888777777777889999999999999998888788887 478888999988876 999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 009130 506 IMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~ 522 (543)
+.+++.++..++.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 165 TLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88877777666554443
No 161
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.29 E-value=4.4e-11 Score=120.60 Aligned_cols=181 Identities=16% Similarity=0.172 Sum_probs=124.7
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHH-HHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQ-VGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
.+|..++.++......+.+....|. +.+++|+|+.+.++..+...++..++.++.|+++||+||| +.+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR------YTTTLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHH
Confidence 4666777777666666777778885 6678999999999999999999999999999999999654 66777777
Q ss_pred HHHHHHHHHh-hc-CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 409 AMSIGHIAIA-SG-FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 409 ~~~i~~~~~~-~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
+..++.++.. .+ +...+++..++.|++.+ .+.....++.|.+|+++|+++.++......+|.. +++.+.+.+.+..
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~~ 153 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGG-VAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH-HHHHHHHHHHHHH
Confidence 7777776665 34 55566777888888754 4555677899999999999999998766656653 4544444444321
Q ss_pred cCCCCccccccchhHHHHHH-HHHHHHHHHHHHHH
Q 009130 487 ASGEDHTCYGTHCFMLSFMI-MAFVAFFGSLVAFL 520 (543)
Q Consensus 487 g~~~~~~~~~~~~~~~~f~~-~~~~~~~~~i~~~~ 520 (543)
....+ .....+|++.|++ .+++..+..++.+.
T Consensus 154 ~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 154 IFGAG--LPAHLAWGWAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred Hhccc--ccccccccchhHHHHHHHHHHHHHHHHH
Confidence 10000 0011248888843 34444444333333
No 162
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.29 E-value=7.5e-11 Score=122.45 Aligned_cols=157 Identities=18% Similarity=0.164 Sum_probs=116.3
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-----Ccc
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG-----FPG 423 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~-----~~~ 423 (543)
....|.+.++ |+++++.++..+...++..++.++.|+++||+|+| +++..+.++.+++.+++... +..
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k------~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 121 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR------VFLPAGLILAAAVMLFMGFVPWATSSIA 121 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc------hhHHHHHHHHHHHHHHHHhhhcccccHH
Confidence 3455666666 99999999999999999999999999999999654 57777777777666655421 233
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHH
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLS 503 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~ 503 (543)
.+++..++.|++.+...+.....+.|.+|+++++++.|+.+.+..+|+.+.+|.+...+....+ |+..
T Consensus 122 ~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g------------w~~~ 189 (452)
T PRK11273 122 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND------------WHAA 189 (452)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc------------HHHH
Confidence 4566677888888877777777888999999999999999888888864455543322322223 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 009130 504 FMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|++.+++.++..++.+++.++
T Consensus 190 f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 190 LYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccC
Confidence 999887777766655554443
No 163
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=4.5e-11 Score=121.62 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=128.6
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL 407 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~ 407 (543)
+|+|+.+.+..++............+.+.++++.++.+.++..+.+.+...+..++.|+++||++|| +++..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr------~vl~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG------RVMFIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc------hhhHHHH
Confidence 4667777777777655444445555666788899999999999999999999999999999999654 6777777
Q ss_pred HHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 408 VAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 408 ~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
++..++.+.+.. .++ ++..++.|++.+...+...++++|.+|+|+++++.|+......++. ++||.++|.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~-~~Gp~lgG~l~~~~ 151 (393)
T PRK11195 76 GIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAI-LLGTVLGGALADPH 151 (393)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 766665554332 222 5567788999999999999999999999999999999999888888 58999999998853
Q ss_pred cCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 487 ASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 487 g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
|+..+.+.+...+++.+
T Consensus 152 -------------~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 152 -------------AEAALAVCALIYLLAAL 168 (393)
T ss_pred -------------HHHHHHHHHHHHHHHHH
Confidence 66666666555444433
No 164
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1.8e-12 Score=126.66 Aligned_cols=178 Identities=16% Similarity=0.205 Sum_probs=143.3
Q ss_pred HHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH
Q 009130 333 FLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSI 412 (543)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i 412 (543)
.+++...+...-.+.+....+...+.+|.+++..+++.+.+.+..++..+++|+++||+ +|++++.++.++..+
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry------NR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY------NRKRVIAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc------CcceEEeeHHHHHHH
Confidence 34444444444445555555666666799999999999999999999999999999999 555788888888777
Q ss_pred HHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCC
Q 009130 413 GHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGED 491 (543)
Q Consensus 413 ~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~ 491 (543)
+.+...+ ...+.+.+...+.|+|.+...+..+++++|.|+.++|+..+++.+.+..+|+. +|-+..+.+.+.++.
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg-lG~vvgs~va~~~~~--- 186 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG-LGYVVGSVVASLTFW--- 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc-eeEEeeeeeccCccc---
Confidence 7666553 34466777899999999999999999999999999999999999999999984 675556666666653
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 009130 492 HTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRRF 528 (543)
Q Consensus 492 ~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 528 (543)
||++|++.+++.++..++..++.++.+|+
T Consensus 187 --------Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 187 --------WRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred --------eEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 99999999999999999888887766554
No 165
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.26 E-value=6.6e-11 Score=123.30 Aligned_cols=170 Identities=14% Similarity=0.142 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhh-hhhhcCCCchHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDV-FLHKLGWARPIFMVIT 406 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~-~~~~~~~~r~~~~~~~ 406 (543)
+.+|.++...+.--..++.+...++.|++ ++|++.+++++..+.+.....+..+++|+++|| +|| ++++..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~------r~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT------KRTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch------HHHHHHH
Confidence 44666666666666677777777777764 589999999999999988888888999999999 855 4788888
Q ss_pred HHHHHHHHHHHhh-cCc-chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc--hhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHIAIAS-GFP-GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH--MGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 407 ~~~~~i~~~~~~~-~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
.++..++.+.+.. .+. ..+++..++.|++.|...+...+++.|.+|+++ ++.+++...++.++|+. ++|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~-~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL-ISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH-HHHHHHHHH
Confidence 8888888776653 232 234567778899999988889999999998874 57789999999999984 889899999
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHHHH
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
.+..| |++.|++..+..+++.+.
T Consensus 167 ~~~~g------------w~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 167 ADKFG------------YSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHhhC------------hHHHHHHHHHHHHHHHHH
Confidence 98876 999999876544444433
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=9.1e-11 Score=123.53 Aligned_cols=161 Identities=17% Similarity=0.204 Sum_probs=129.4
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVA 409 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~ 409 (543)
.+..+++..++............|.+.+++|.|+.+.++..+...++..++.++.|+++||+||| +.+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR------LAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHH
Confidence 34455555555444444555567888888999999999999999999999999999999999654 677777777
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC
Q 009130 410 MSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS 488 (543)
Q Consensus 410 ~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~ 488 (543)
..++.++.. ..+...+++..++.|++.+...+....++.|.+++++++.+.|+...+..+|. +++|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~- 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA-VVAAQVYSLVVPVWG- 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCC-
Confidence 777766655 34556677788899999998888888999999999999999999999999998 488888998888766
Q ss_pred CCCccccccchhHHHHHHHHH
Q 009130 489 GEDHTCYGTHCFMLSFMIMAF 509 (543)
Q Consensus 489 ~~~~~~~~~~~~~~~f~~~~~ 509 (543)
|+..|++...
T Consensus 173 -----------w~~~f~~~~~ 182 (496)
T PRK03893 173 -----------WRALFFIGIL 182 (496)
T ss_pred -----------HHHHHHHHHH
Confidence 9998876543
No 167
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.25 E-value=1.3e-10 Score=115.99 Aligned_cols=169 Identities=19% Similarity=0.310 Sum_probs=137.3
Q ss_pred HHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 009130 334 LCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIG 413 (543)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~ 413 (543)
+....+.............|.+.++.|.++.+.+...+...++..++.++.|+++||++|| +.+..+.+...++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r------~~~~~~~~~~~~~ 77 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR------RVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc------hhhHHHHHHHHHH
Confidence 3344444444445566677888888999999999999999999999999999999999654 5777777777777
Q ss_pred HHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCc
Q 009130 414 HIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDH 492 (543)
Q Consensus 414 ~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~ 492 (543)
.+... .++...+++..++.|++.+...+...+++.|.+|+|+|+++.++......+|. .++|.+.+.+.+..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~----- 151 (352)
T cd06174 78 SLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGA-LLGPLLGGLLAESLG----- 151 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHhh-----
Confidence 76655 45566677788899999999899999999999999999999999999999998 488989999988776
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 493 TCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 493 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
|+..+++.+...++..+...++
T Consensus 152 -------~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 152 -------WRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999988887777766654433
No 168
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=5.8e-11 Score=123.82 Aligned_cols=158 Identities=15% Similarity=0.058 Sum_probs=119.2
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh------hcC
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA------SGF 421 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~------~~~ 421 (543)
+....|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|+| +++..+.++..+....+. .++
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 121 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK------QFLPFLLILSAICMLGFGASLGSGSVS 121 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc------chHHHHHHHHHHHHHHHHHHHhcccch
Confidence 44557888889999999999999999999999999999999999755 555555555444433322 245
Q ss_pred cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhH
Q 009130 422 PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFM 501 (543)
Q Consensus 422 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~ 501 (543)
...+++..++.|++.+...+....+++|.+|+++||.+.|+...+..+|+. +++.+..++.+... ..+|+
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~-l~~~i~~~~~~~~~---------~~~~~ 191 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGA-GAGGVALWGANYFF---------DGHVI 191 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhh-HHHHHHHHHHHhhc---------cCcch
Confidence 556777788899999988888889999999999999999999998889885 66666666555421 01277
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 009130 502 LSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~ 521 (543)
..|.+.+.+.++..++.+++
T Consensus 192 ~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 192 GMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 78877776666555554444
No 169
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.22 E-value=3.5e-10 Score=115.15 Aligned_cols=150 Identities=13% Similarity=0.086 Sum_probs=124.1
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNL 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~ 425 (543)
.....+|.+.+++|.|..+.++..+.+.++..++.++.|++.||+||| +++..+.++.+++.+... .++...+
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r------~~l~~~~~l~~~~~~~~~~a~~~~~l 100 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER------RSVAISLLLIAVGALMRELYPQSALL 100 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch------HHHHHHHHHHHHHHHHHHHCcchHHH
Confidence 345667888899999999999999999999999999999999999654 788899999999988776 5667778
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
++..++.|++.+...+..+.++.+.++ ++++.+.|....+...|. .+++.+.+.+.+... +|+..+.
T Consensus 101 l~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~-~~g~~~~~~l~~~~~-----------~w~~~~~ 167 (393)
T PRK09705 101 LSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGG-GLGAAITPWLVQHSE-----------TWYQTLA 167 (393)
T ss_pred HHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhcC-----------CHHHHHH
Confidence 888999999999988888889999887 789999999988888887 477778888777653 2888877
Q ss_pred HHHHHHHHHH
Q 009130 506 IMAFVAFFGS 515 (543)
Q Consensus 506 ~~~~~~~~~~ 515 (543)
+.++..++..
T Consensus 168 ~~~~~~~~~~ 177 (393)
T PRK09705 168 WWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHH
Confidence 6655544433
No 170
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.22 E-value=2.1e-10 Score=116.45 Aligned_cols=151 Identities=11% Similarity=0.070 Sum_probs=123.3
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL 407 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~ 407 (543)
++.++.+.+..++...........+|.+.+++|.|..+.++..+.+.++..+++++.|+++||+||| +.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k------~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN------RSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------HHHHHHH
Confidence 3457777777776666656677788999999999999999999999999999999999999999765 5666777
Q ss_pred HHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Q 009130 408 VAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR 485 (543)
Q Consensus 408 ~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~ 485 (543)
++..++..... .++.+.+++..++.|++.+...+.....+.+..++++++++.|.......+|. .++|.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGT-VLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccc
Confidence 77777666555 45666677788899999888777777777788888999999999999899998 4888888887665
No 171
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.21 E-value=1.3e-10 Score=121.45 Aligned_cols=152 Identities=20% Similarity=0.258 Sum_probs=115.0
Q ss_pred hhhchHHHHHhhCCC--------chhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-
Q 009130 348 TMNNIAQVGESLHYS--------TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA- 418 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s--------~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~- 418 (543)
+...++....+.+++ ..+.++..+.+.++..++.++.|+++||+||| +.+..+.++..++.++..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr------~~~~~~~~~~~~~~~~~~~ 120 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK------KSLLIIALLFVIGAILMGL 120 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH------HHHHHHHHHHHHHHHHHHH
Confidence 333445555555555 88999999999999999999999999999654 667777777776666553
Q ss_pred hcC---cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh---hhhhhhccCCCCc
Q 009130 419 SGF---PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII---GRIYDRVASGEDH 492 (543)
Q Consensus 419 ~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~---g~l~~~~g~~~~~ 492 (543)
..+ ...+++..++.|++.+...+....++.|.+|+++|+.+.++.+....+|. ++++.+. +...+..+
T Consensus 121 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~----- 194 (481)
T TIGR00879 121 AAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGI-LVAYGFGSGKVSLNNTLG----- 194 (481)
T ss_pred hccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHH-HHHHHHHHHhhcCCCCcc-----
Confidence 222 22577788899999999988889999999999999999999999888988 4777666 34334433
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHH
Q 009130 493 TCYGTHCFMLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 493 ~~~~~~~~~~~f~~~~~~~~~~~i~~ 518 (543)
|+..|++.+...++..+..
T Consensus 195 -------w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 195 -------WRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred -------HHHHHHHHHHHHHHHHHHH
Confidence 9999998666555554443
No 172
>PRK12382 putative transporter; Provisional
Probab=99.21 E-value=2.8e-10 Score=116.00 Aligned_cols=163 Identities=14% Similarity=0.059 Sum_probs=119.8
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
++.++.+.+..++...........+|.+. +++|.|+.+.++..+.+.+...+++++.|+++||+||| +.+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r------~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK------RSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch------HHHHHH
Confidence 34455555555555444444556667654 67899999999999999999999999999999999654 566666
Q ss_pred HHHHHHHHHH---Hh-h-----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHIA---IA-S-----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 407 ~~~~~i~~~~---~~-~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
.+...++.+. .. . .+...+++..++.|++.+...+...+++.|.+|+|+|+++.|....+...+. .++|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~-~~g~~ 166 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGAL-AAGAP 166 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHH-HHHHH
Confidence 5554443322 11 1 1234466778888998887777777888999999999999999988888887 58888
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHH
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAF 509 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~ 509 (543)
+.+.+.+..| |+..+.+...
T Consensus 167 ~~~~l~~~~g------------~~~~~~~~~~ 186 (392)
T PRK12382 167 LGLLLHSHFG------------FAALALTTMV 186 (392)
T ss_pred HHHHHHhccC------------hHHHHHHHHH
Confidence 8888888766 8776555443
No 173
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=3.3e-10 Score=117.59 Aligned_cols=154 Identities=13% Similarity=0.092 Sum_probs=120.7
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 426 (543)
+..+.+.+.+++|.+.++.++..+.+.+...++.++.|+++||++|| +.+..+.++..+++++.. .++...++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~l~ 111 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR------PVVIAGGLLASLGMILASFSSNVIELY 111 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch------HHHHhhHHHHHHHHHHHHHhhhHHHHH
Confidence 44557788888999999999999999999999999999999999654 567777777777666655 34444444
Q ss_pred HH-HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 427 VG-TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 427 ~~-~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
+. .++.|++.+...+....++.+.++ ++|+++.|+.+.+..+|.. ++|.+.+.+.+..| |+.+|+
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~-~~~~l~~~l~~~~g------------wr~~f~ 177 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLS-TLAPLNQYLFESFG------------WRGSFL 177 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHH-HHHHHHHHHHHHhC------------hHHHHH
Confidence 43 367788888766666677788885 7899999999999999984 78889999998876 999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009130 506 IMAFVAFFGSLVAFLL 521 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~ 521 (543)
+.+++.++..+..+++
T Consensus 178 ~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 178 ILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9988777666554444
No 174
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.18 E-value=9.5e-11 Score=112.38 Aligned_cols=149 Identities=20% Similarity=0.191 Sum_probs=132.1
Q ss_pred hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-CcchHHHHHHHHHhhhh
Q 009130 359 LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG-FPGNLFVGTMIVGVCYG 437 (543)
Q Consensus 359 ~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g 437 (543)
.+-+.++.+++++..++.+.+.+++.|.+.||+|+| ..+.++++.+..+.+++++. +...++++..+-|+|.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 456678999999999999999999999999999765 67888999999999999865 45668889999999999
Q ss_pred hhhhhHHHHHHhhcCCcc-hhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 438 SQWSLMPTITSEIFGVRH-MGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
+..+...++++|.||+++ |+++.|+.....++|- +++|+++|.++|..| ++.+|.++++++++-..
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~-lvgPpfGGilYe~~G------------k~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGV-LVGPPFGGILYEFAG------------KSAPFLVLAIVLLLDGA 241 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccc-eecCCcccchHhhcC------------CcCcHHHHHHHHHHHHH
Confidence 999999999999999876 6999999999999998 699999999999998 88999999999999998
Q ss_pred HHHHHhhcch
Q 009130 517 VAFLLFLRTR 526 (543)
Q Consensus 517 ~~~~~~~~~~ 526 (543)
+.+++...++
T Consensus 242 L~l~vi~p~~ 251 (464)
T KOG3764|consen 242 LQLLVIEPTE 251 (464)
T ss_pred HHHheeCccc
Confidence 8887765443
No 175
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.18 E-value=3e-10 Score=118.04 Aligned_cols=177 Identities=16% Similarity=0.148 Sum_probs=126.6
Q ss_pred cchhHHHHHHHHHhhhchh-hh---hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 327 CTGNFWFLCIATLCGMGSG-IA---TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 327 ~~~~f~~~~l~~~~~~~~~-~~---~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
++++++..+..+.+..... +. ....++++.+|+|-+ ....++.+...+...++.++.|.++|.+|| ++.
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR------r~~ 110 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR------RYF 110 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc------hHH
Confidence 4566666554444432222 12 233456777888865 567788888999999999999999999965 488
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGR 481 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~ 481 (543)
++.+.++.+++.++.+ .++...++....+.|++.|... .....++|..|.|.|....++......+.. ..+|.+...
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~-~~~~~ia~~ 188 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITT-WISPLIAQL 188 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhh-cccHHHHHH
Confidence 9999999999999887 5667778888999999977665 456668999999999887776654443333 245544444
Q ss_pred hhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 482 IYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 482 l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
+.... +||+.|++..++..+++++.+++++.
T Consensus 189 ~~~~~------------~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 189 FAAHS------------GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred hccCC------------CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 43332 39999999999888888776665543
No 176
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.17 E-value=4.4e-10 Score=114.79 Aligned_cols=165 Identities=14% Similarity=0.047 Sum_probs=123.8
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL 407 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~ 407 (543)
+++..+.+..++...........+|.+. +++|.|+.+.++..+.+.++..+++++.|+++||+||| +++..+.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r------~~l~~~~ 88 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK------KAVVFGL 88 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc------chHHHHH
Confidence 4555566666655555555566677755 56899999999999999999999999999999999655 5666666
Q ss_pred HHHHHHHHHHh---h-cC-----cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhh
Q 009130 408 VAMSIGHIAIA---S-GF-----PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRI 478 (543)
Q Consensus 408 ~~~~i~~~~~~---~-~~-----~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l 478 (543)
++..++..... . .+ ...+++..++.|++.+...+....++.|.+++|+|+++.|+......+|. +++|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l 167 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGAL-AIGAPL 167 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHH-HHHHHH
Confidence 65554433221 1 11 22456677889999888888888888999999999999999888888877 588888
Q ss_pred hhhhhhhccCCCCccccccchhHHHHHHHHHHHH
Q 009130 479 IGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAF 512 (543)
Q Consensus 479 ~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~ 512 (543)
.+.+.+..| |+..+++...+.+
T Consensus 168 ~~~l~~~~g------------~~~~~~~~~~~~~ 189 (399)
T PRK05122 168 GVLLYHWGG------------LAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHccc------------HHHHHHHHHHHHH
Confidence 888888776 8887776555443
No 177
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.16 E-value=3e-10 Score=116.82 Aligned_cols=178 Identities=12% Similarity=0.063 Sum_probs=115.6
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
..++++.+|.+.+.+++.......+..++|.++++ +|+|+.+.+...+...++..+++++.|+++||+++| +.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r------~~ 78 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK------KH 78 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch------HH
Confidence 34567889998888887776666677888888876 899999999999999999999999999999999764 44
Q ss_pred HHHHHHHHHHHHH---HHhhcCc-c-hHHHH----HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhh
Q 009130 403 MVITLVAMSIGHI---AIASGFP-G-NLFVG----TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYI 473 (543)
Q Consensus 403 ~~~~~~~~~i~~~---~~~~~~~-~-~~~~~----~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i 473 (543)
+.++.....++.. ....... . ..... .+..|.+.....+....+..+ . .++++..+|.......+|. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~-~ 155 (420)
T PRK09528 79 LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGW-A 155 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHH-H
Confidence 4443333322221 1111000 0 11111 222232222222233333322 2 2456778888888888888 4
Q ss_pred hhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 474 CSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 474 ~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
++|++.|.+.+. + |+..|++.++..++..++.+..++
T Consensus 156 i~~~~~g~l~~~-~------------~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 156 LCAFIAGILFNI-N------------PQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HHHHHHHHHHhc-C------------chHhHHHHHHHHHHHHHHHhcccc
Confidence 788888988774 3 788898888777766655554443
No 178
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.15 E-value=5.1e-10 Score=117.30 Aligned_cols=150 Identities=17% Similarity=0.105 Sum_probs=110.2
Q ss_pred CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh----------cC---cchHH
Q 009130 360 HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS----------GF---PGNLF 426 (543)
Q Consensus 360 g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~----------~~---~~~~~ 426 (543)
+.++.+.++..+.+.++..++.+++|+++||+||| +++..+.++.+++.+..+. .+ ...++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr------~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR------DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 78888999999999999999999999999999654 6777777776666554332 11 12356
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
+..++.|++.|+..+..+++++|.+|+++|+++.|+...+..+|.. +++.+.+.+...... ......+||+.|++
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~----~~~~~~gWr~~f~~ 199 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL-VVYFVNYFIARSGDA----SWLNTDGWRYMFAS 199 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhccCcc----cccccCChHHHHHH
Confidence 7788999999999999999999999999999999999888888874 555444433221100 00012359999998
Q ss_pred HHHHHHHHHHHHHH
Q 009130 507 MAFVAFFGSLVAFL 520 (543)
Q Consensus 507 ~~~~~~~~~i~~~~ 520 (543)
.++..++..+..++
T Consensus 200 ~~~~~~~~~~~~~~ 213 (479)
T PRK10077 200 EAIPALLFLMLLYF 213 (479)
T ss_pred HHHHHHHHHHHHHc
Confidence 87777666554433
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.14 E-value=1.6e-10 Score=120.54 Aligned_cols=147 Identities=16% Similarity=0.181 Sum_probs=119.9
Q ss_pred hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh---hcCcchHHHHHHHHHh
Q 009130 358 SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA---SGFPGNLFVGTMIVGV 434 (543)
Q Consensus 358 ~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~l~G~ 434 (543)
+++++..+.+.+.+.+.++..++.++.|+++||+++| +.+..+.++..++.++.. ..+...+++..++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK------WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc------hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 5688999999999999999999999999999999654 566666666665554432 2334567778889999
Q ss_pred hhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc-cCCCCccccccchhHHHHHHHHHHHHH
Q 009130 435 CYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV-ASGEDHTCYGTHCFMLSFMIMAFVAFF 513 (543)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~-g~~~~~~~~~~~~~~~~f~~~~~~~~~ 513 (543)
+.+...+....+++|.+|+++|+++.|+...+..+|.. ++|++.+.+.+.. + |+..|++.++..++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~l~~~l~~~~~g------------w~~~f~i~~~~~~~ 210 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTF-IFLPISGWLCESWGG------------WPMIFYVFGIVGCA 210 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCC------------CCeehhhhhHHHHH
Confidence 99999999999999999999999999999999999984 7888999988874 5 99999998887766
Q ss_pred HHHHHHHHhh
Q 009130 514 GSLVAFLLFL 523 (543)
Q Consensus 514 ~~i~~~~~~~ 523 (543)
..++.+.+.+
T Consensus 211 ~~~~~~~~~~ 220 (465)
T TIGR00894 211 WSLLWFVFPA 220 (465)
T ss_pred HHHHHHHHhc
Confidence 6655555443
No 180
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.14 E-value=6.2e-10 Score=112.56 Aligned_cols=162 Identities=9% Similarity=0.022 Sum_probs=115.9
Q ss_pred hhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 009130 345 GIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP 422 (543)
Q Consensus 345 ~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~ 422 (543)
.......+|.++ +++|.|+.+.++..+.+.+...+..++.|.++||+||| +..+..+.+...++.++.. .++.
T Consensus 13 ~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~ 87 (375)
T TIGR00899 13 GALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR-----KGLILFCCLLAALACLLFAWNRNY 87 (375)
T ss_pred HHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-----hHHHHHHHHHHHHHHHHHHhcchH
Confidence 334455666665 56899999999999999999999999999999999754 2344444555445544444 3444
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhH--HHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTI--FNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
..+++..++.|.+.+...+...++..|..+++.++.+ .+.......+|. .++|.+.+.+.+..+ |
T Consensus 88 ~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~ig~~~~~~l~~~~~------------~ 154 (375)
T TIGR00899 88 FLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAW-VIGPPLAFWLALGFG------------F 154 (375)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHH-HHhhhHHHHHHHhcc------------c
Confidence 4555556666766666666666777888777766644 577777777887 588888999888776 9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 501 MLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
+..|++.+...++..++.++..++
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999988777776665554443
No 181
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.12 E-value=1.3e-09 Score=108.97 Aligned_cols=160 Identities=9% Similarity=0.019 Sum_probs=130.4
Q ss_pred hhchHHHHHhhCCCchh-hHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 009130 349 MNNIAQVGESLHYSTTE-INSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~-a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 426 (543)
....|++.+++|+++++ .+.+.+.+..+..+..+..|+++||+|.| +++..+.+...+...+.. ..+...+.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K------~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK------PVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456677789999999 99999999999999999999999999754 677777777777666655 34667788
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
+..++.|++.|+.+ ....++.+.+|+++|+++.|+.+.+..+|.. +++++.+.+. ..| -+.|+...++
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~-Ia~~L~qll~-s~g---------Wr~y~~Ln~I 187 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF-LSSVLGQLLV-TLG---------WISYSTLNII 187 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-hcC---------chhHHHHHHH
Confidence 89999999999999 8889999999999999999999999999995 7777777743 333 2347777778
Q ss_pred HHHHHHHHHHHHHHHhhcch
Q 009130 507 MAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 507 ~~~~~~~~~i~~~~~~~~~~ 526 (543)
..+...+++++++++.+.+|
T Consensus 188 sl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 188 SLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHhCCCCch
Confidence 88888888888888765444
No 182
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.12 E-value=8.9e-10 Score=112.43 Aligned_cols=173 Identities=14% Similarity=0.089 Sum_probs=118.7
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVIT 406 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~ 406 (543)
||.+|.+....++.......+..++|.++++ +|+++.+.+...+...+...+++++.|+++||+||| +.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr------~~~~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK------KHLLWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHH
Confidence 5788888888887777766777788888765 799999999999999999999999999999999765 444444
Q ss_pred HHHHHHHHH---HHhhcC------cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 407 LVAMSIGHI---AIASGF------PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 407 ~~~~~i~~~---~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
.+...++.. .+.... .....+..++.|++.+...+....+..+.- ++++..+|.......+|. .++|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~-~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGW-ALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHH-HHHHH
Confidence 333332222 111111 111233345667777666666666666643 234556777777777887 47888
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
+.|.+.+. + |+..|++.+.+.++..++.+...
T Consensus 152 ~~g~l~~~-~------------~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 152 IAGILFSI-D------------PQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHhhhhcc-C------------chHHHHHHHHHHHHHHHHHHHhC
Confidence 88877654 4 88999988877777665554433
No 183
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.10 E-value=1.8e-09 Score=110.29 Aligned_cols=181 Identities=12% Similarity=0.001 Sum_probs=131.2
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM 410 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~ 410 (543)
++.++..++.............|.+.+++|.|+.+.+++.+...++..++.+..|++.||+|+| +.+..+.++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r------~~~~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK------AGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHHHH
Confidence 4555555444433333334666888888999999999999999999999999999999999654 7888888888
Q ss_pred HHHHHHHhh----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc
Q 009130 411 SIGHIAIAS----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV 486 (543)
Q Consensus 411 ~i~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~ 486 (543)
+++.+++.. ++...+.+..++.|++.|...+..++++.+..|++++++..++.+....+|. .++|.+.+.+....
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGS-IIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC
Confidence 888776531 2445567778889999999988888899999999999999999988888888 47887777665321
Q ss_pred cCCC---C-------cc----ccccchhHHHHHHHHHHHHHHHHHH
Q 009130 487 ASGE---D-------HT----CYGTHCFMLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 487 g~~~---~-------~~----~~~~~~~~~~f~~~~~~~~~~~i~~ 518 (543)
.... + .. .....+|+.+|++.+++.++..++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000 0 00 0011358999988887666554443
No 184
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.08 E-value=3.3e-09 Score=111.15 Aligned_cols=292 Identities=15% Similarity=-0.002 Sum_probs=185.6
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWA 111 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~ 111 (543)
......+++.|+++.++.|++.+.+-++.. ...+..+...|.. |-+.+-+|.+++++|.+++.+
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H---------------rPr~Ig~G~~~m~lgsll~al 181 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH---------------RPRWIGIGLVLMGLGSLLFAL 181 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC---------------ccceeeechhHHHHHHHHHhC
Confidence 344568899999999999999999999987 4558888888876 666677888888888888543
Q ss_pred H------------H---hcc-----------------------------CCCCChHHHHHHHHHHHhcCcchhhhhHHHH
Q 009130 112 S------------V---VGL-----------------------------LPRPVPVPLMCLFIFTAAHAQNFFNTGNIVT 147 (543)
Q Consensus 112 ~------------~---~~~-----------------------------~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~ 147 (543)
= . ... ..+...+..++++-++.|+|....++....+
T Consensus 182 PHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisY 261 (735)
T KOG3626|consen 182 PHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISY 261 (735)
T ss_pred hHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcc
Confidence 1 0 000 0010023345668999999999999999999
Q ss_pred HhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheec--cCCC-Ccccchhhh
Q 009130 148 GVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRI--YGTN-SVDDKKHLN 223 (543)
Q Consensus 148 ~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 223 (543)
+-|+.. ++....+|+......+|+++|-.+++...+- .+.. .+.+ .+.+.+|.-
T Consensus 262 iDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~l----------------------YvD~~~~~~~it~~DPrWIG 319 (735)
T KOG3626|consen 262 IDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKL----------------------YVDFGLSPIGITPTDPRWIG 319 (735)
T ss_pred ccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHe----------------------eeccccCCCCCCCCCcchhh
Confidence 999997 5688999999999999999997777665321 1111 0000 011111111
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCccccCCCcc
Q 009130 224 AFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHELADDES 303 (543)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (543)
+ .++ .-.+.+.+..+..+++.++-|+.|+..++ .+..+.+...++++..+++
T Consensus 320 A-WWl------------------------GFLi~g~~~~~~a~p~f~fPk~lp~~~~~---~~~~~~~~~k~~~~~~~~~ 371 (735)
T KOG3626|consen 320 A-WWL------------------------GFLICGALLLFSAVPLFFFPKELPKSQKR---KRARDLHVLKTESGGAKSD 371 (735)
T ss_pred H-HHH------------------------HHHHHHHHHHHHHHHHHhCcccCcccccc---chhhhhcccccccccccCC
Confidence 0 111 11223344455555555554444332211 0000000000000000000
Q ss_pred chhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHH-Hhhhc
Q 009130 304 KVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIW-NFFGR 381 (543)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~-~~ig~ 381 (543)
. ...+.-+......+++++||.|....+...+-.....++..++|-|++. +|.+++.+..+....++. ..+|.
T Consensus 372 ~-----~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi 446 (735)
T KOG3626|consen 372 K-----TFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGI 446 (735)
T ss_pred c-----chhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhh
Confidence 0 0000112334667889999999999999888888888899999999965 699999999999765554 56799
Q ss_pred cccccchhhhhhh
Q 009130 382 FGAGYGSDVFLHK 394 (543)
Q Consensus 382 ~~~G~lsD~~~~~ 394 (543)
+++|++..|+..+
T Consensus 447 ~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 447 FLGGLIIKKFKLS 459 (735)
T ss_pred hccceeeeeeccc
Confidence 9999999988543
No 185
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.07 E-value=8.1e-08 Score=95.08 Aligned_cols=352 Identities=8% Similarity=-0.000 Sum_probs=196.3
Q ss_pred cccccHHHHhh-cCCChhhHH-HHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKST-QNYDQSTLE-RVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 32 ~~~~~~~l~~~-~~~s~~~~~-~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
-+.+.|++.+. .|+|..|+. -+.=...-++. ..+|...+.|..+ .|++++++.+...+...+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~---------------Ykpviil~~~~~i~t~~l 87 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLR---------------YKPVIILQALSYIITWLL 87 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhh---------------hhHHHHHHHHHHHHHHHH
Confidence 34566777775 899999987 33333333333 5668999999998 999999988876666555
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCC--
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGN-- 185 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~-- 185 (543)
.-+.++ ...+-+.-+..|++.+. ..+-.+++-...| ++--++++..-+..-+|-.+++.+++.+.+-.
T Consensus 88 -----ll~~~s---v~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~ 158 (412)
T PF01770_consen 88 -----LLFGTS---VLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGV 158 (412)
T ss_pred -----HHHHCc---HHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 223455 78888888888888776 3445555655556 46678898888888888888888888776432
Q ss_pred chhHHHHHHHHHHHHHHHHHhheeccCCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhh
Q 009130 186 PSTYILVLALLPTLVSLLFMSHVRIYGTNSVDDKKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLA 265 (543)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (543)
+-.....+......++++...+++..+++.
T Consensus 159 sy~~L~~isl~~~~~a~~~~~fLP~~~~S~-------------------------------------------------- 188 (412)
T PF01770_consen 159 SYFQLNYISLASVSLALLIALFLPMPKRSL-------------------------------------------------- 188 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCccc--------------------------------------------------
Confidence 223333444444444444444444332210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCccccCC-Cccchhccccc--ccchhhcchhHHHhhcchhHHHHHHHHHhhh
Q 009130 266 SPLRVAITADREDAMTSPKLSTPQQDPLAYHELAD-DESKVTAAFDD--KILKDEEDMNLLQAMCTGNFWFLCIATLCGM 342 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~ 342 (543)
.+++.+++.. +.++.+.++..+.++.+ ++++....... ...-+....+.++..++|......+...+..
T Consensus 189 -----~f~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 189 -----FFHRKPPAEQ---DANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred -----ceeccCcccc---ccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 0011111000 00000000000000000 00000000000 0000111234455667787666666666665
Q ss_pred chhhhhhhchHHHHHhh---CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-
Q 009130 343 GSGIATMNNIAQVGESL---HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA- 418 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~---g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~- 418 (543)
.+..-..++.....++. +-+..-.|..-++..+.+.++.+..|++..+..+. + ...+....++.+..++++.
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~---~-~l~l~~~S~l~a~~L~lm~~ 336 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW---G-ELALGVFSLLQAGLLFLMSF 336 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH---H-HHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555 33334556677788888888888888884444321 1 1233333334444444444
Q ss_pred hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhh
Q 009130 419 SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPV 469 (543)
Q Consensus 419 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~i 469 (543)
..+.+..++..++++..+....+....-++.....+.+|.++|+-.....+
T Consensus 337 t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~ 387 (412)
T PF01770_consen 337 TGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALV 387 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHH
Confidence 445566677777777766666666666666667778888888886554433
No 186
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.06 E-value=3.8e-09 Score=110.60 Aligned_cols=182 Identities=12% Similarity=0.005 Sum_probs=127.1
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHH
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFM 403 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~ 403 (543)
+..++++.+.+....+............+|.++++.|.|.++.+... ..+... ++++++|+++||+.+.+.-+|+..+
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCCCchHHH
Confidence 33445555555555555544555566778889999999998888863 222222 6889999999998322110223456
Q ss_pred HHHHHHHHHHHHHHhhc----CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhh
Q 009130 404 VITLVAMSIGHIAIASG----FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRII 479 (543)
Q Consensus 404 ~~~~~~~~i~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~ 479 (543)
..+.+..+++...++.. +...+.+..++.+++.+...+...++..|.+|+|+|+++.++...+..+|. ++++.+.
T Consensus 85 l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~-llg~~l~ 163 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM-LVSGGLA 163 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 56666666665554421 223455566777888887778888999999999999999999999999998 4777788
Q ss_pred hhhhh-hccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 480 GRIYD-RVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 480 g~l~~-~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
+.+.+ ..| |+..|++.++..++..+..++
T Consensus 164 ~~l~~~~~G------------Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 164 LWLADRYLG------------WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHhcccC------------HHHHHHHHHHHHHHHHHHHHh
Confidence 88887 345 999999998877776655444
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.05 E-value=1.6e-09 Score=109.98 Aligned_cols=160 Identities=9% Similarity=0.023 Sum_probs=114.1
Q ss_pred HHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 009130 332 WFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMS 411 (543)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~ 411 (543)
+.+.+.++...........++|.++++.|+|.++.+...+...+...++.+++|.++||++|+.. .+..+..+..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII--ALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHH
Confidence 33445555554444556778899999999999999999999999999999999999999975321 1112222221222
Q ss_pred HHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC
Q 009130 412 IGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE 490 (543)
Q Consensus 412 i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~ 490 (543)
+ .... .++.+.+++...+.+.+.+...+...+++.+. ++++++++|.......+|. +++|++.|.+.+..|
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~-~~g~~l~g~l~~~~g--- 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAF-IIGSALFGGLIGMFD--- 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHH-HHHHHHHHHHHHHcC---
Confidence 1 1122 34455566666677777777777766666553 4778999999999999998 589999999999887
Q ss_pred CccccccchhHHHHHHHHHH
Q 009130 491 DHTCYGTHCFMLSFMIMAFV 510 (543)
Q Consensus 491 ~~~~~~~~~~~~~f~~~~~~ 510 (543)
|+..|++....
T Consensus 157 ---------~~~~f~~~~~~ 167 (382)
T TIGR00902 157 ---------EQNILAILTAG 167 (382)
T ss_pred ---------hhHHHHHHHHH
Confidence 99988877654
No 188
>PTZ00207 hypothetical protein; Provisional
Probab=99.03 E-value=4e-09 Score=110.44 Aligned_cols=159 Identities=11% Similarity=0.041 Sum_probs=116.6
Q ss_pred chhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---
Q 009130 343 GSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS--- 419 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~--- 419 (543)
+..+.+....+.+.+++|+|.++.+.+.++.... ....++.|++.||+|+ ++++.++.++..++.++...
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~------R~vllig~ll~~iG~ll~ala~~ 113 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGP------RPIFVLSMTVFCLGTLLFALTFQ 113 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344555666777788999999999888764433 3566678999999954 47888888888888876653
Q ss_pred ----cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccc
Q 009130 420 ----GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCY 495 (543)
Q Consensus 420 ----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~ 495 (543)
.+.+.+++..++.|++.+...+.....+.+.|| ++||.+.|+......+|+.+++++..+++.+ +
T Consensus 114 ~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~-------- 182 (591)
T PTZ00207 114 EVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--N-------- 182 (591)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--------
Confidence 244556777888898888777777777888886 7889999999999999997666655555432 2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 496 GTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 496 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
++..|++.+++.++..++.+.+.+
T Consensus 183 ----~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 183 ----TSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhhee
Confidence 667777777777666666555443
No 189
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=2.2e-09 Score=107.73 Aligned_cols=149 Identities=16% Similarity=0.119 Sum_probs=115.7
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHH
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFV 427 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 427 (543)
....+|.+.+++|+|.++.++..+.+.++..++.++.|+++||+++| +.+..+.+...++.+....++...+++
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE------RSVAAGLLLIAAGILIRSAPGTALLFA 92 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch------HHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45567888999999999999999999999999999999999999654 566666666655555443445556677
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIM 507 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~ 507 (543)
..++.|++.+...+..+..+.|.++ ++++++.|+.+....+|.. +++.+.+.+.+..+. .|+..|.+.
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-i~~~~~~~l~~~~~~----------~w~~~f~~~ 160 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAA-LAAAATVPLAQHSGG----------HWQQALAWW 160 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh----------hHHHHHHHH
Confidence 7888899888877777788888886 6899999999988888884 777788877765431 288888776
Q ss_pred HHHHHHH
Q 009130 508 AFVAFFG 514 (543)
Q Consensus 508 ~~~~~~~ 514 (543)
++..++.
T Consensus 161 ~~~~~~~ 167 (355)
T TIGR00896 161 ALPALLA 167 (355)
T ss_pred HHHHHHH
Confidence 6544443
No 190
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.03 E-value=9.2e-09 Score=107.94 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=96.0
Q ss_pred HHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc--------hHHHHHHHHHhhhhhhh
Q 009130 370 ISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPG--------NLFVGTMIVGVCYGSQW 440 (543)
Q Consensus 370 ~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~--------~~~~~~~l~G~~~g~~~ 440 (543)
.+...++..+|.+++|+++||+||| +++.++.+++.++.++.+. ++.. .+.+..++.|++.|+.+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr------~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~ 136 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQ------KILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEY 136 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccH------HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhH
Confidence 4666788889999999999999654 7888888888888877663 3432 26677889999999999
Q ss_pred hhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHH
Q 009130 441 SLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFF 513 (543)
Q Consensus 441 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~ 513 (543)
+....++.|.+|+++||...++...+..+|.. +++.+...+....+.. .....+||..|++.+...++
T Consensus 137 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~-lg~~~~~~~~~~~~~~----~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 137 TGASIFVAEYSPDRKRGFMGSWLDFGSIAGFV-LGAGVVVLISTIVGEA----NFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHH----HhcCccHHHHHHHHHHHHHH
Confidence 99999999999999999999998877766663 5554433332211000 00012499999987654444
No 191
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.03 E-value=5.2e-09 Score=109.07 Aligned_cols=175 Identities=16% Similarity=0.095 Sum_probs=135.5
Q ss_pred HHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 323 LQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 323 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
+..+|+|.|..+++...+...+........+-+..+..-|+...++......+-.++..++.|.+.||+.| |++
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~dr------rri 77 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDR------RRI 77 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------hHH
Confidence 45578899988888887776665555555566666666678888888888888899999999999999954 466
Q ss_pred HHHHHHHHHHHHHHH---h---hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAI---A---SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~---~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
++.+-++..+....+ . ..+++.+++..++.|.+.....+...++++|+.|+++...+.++..+..++.. ++||
T Consensus 78 li~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar-~iGP 156 (524)
T PF05977_consen 78 LILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR-IIGP 156 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH-hccc
Confidence 766665554433222 1 23456677788899999988889999999999999999999999999988888 5899
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
.++|.+....| ....|.+.++..++..+
T Consensus 157 algG~Lva~~G------------~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 157 ALGGILVAFFG------------AAAAFLINALSFLISIL 184 (524)
T ss_pred hHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
Confidence 99999998887 67788877765555443
No 192
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.03 E-value=5.2e-09 Score=106.63 Aligned_cols=178 Identities=9% Similarity=0.000 Sum_probs=113.7
Q ss_pred chhHHHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHH-HHhhhccccccchhhhhhhcCCCchHHHHH
Q 009130 328 TGNFWFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSI-WNFFGRFGAGYGSDVFLHKLGWARPIFMVI 405 (543)
Q Consensus 328 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i-~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~ 405 (543)
|.+.+.+.+..++.......+...+|.+. +++|.|+++.++..+...+ +..++.+..++ +||+++| +.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r-----~~~~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDR-----KSLIVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccch-----hHHHHH
Confidence 44456666666665555555566677765 5679999999999876655 55556666666 9999764 234444
Q ss_pred HHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcch--hhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 406 TLVAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHM--GTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 406 ~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
+.+...+...++.. ++...+++...+.+...+...+....+..+..+++++ +...+..+.+..+|. +++|++.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAW-VIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-HHhhHHHHHH
Confidence 44544444444443 3333333333333433344455556667776665544 344577788888988 5899999999
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 483 YDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 483 ~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.|..| |+..|++.+...++..+...+..++
T Consensus 167 ~~~~g------------w~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 167 AMGFS------------FTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHhcC------------hHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 98877 9999999887777766655554443
No 193
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.03 E-value=5.6e-09 Score=106.78 Aligned_cols=160 Identities=14% Similarity=0.049 Sum_probs=114.6
Q ss_pred hhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-C--
Q 009130 345 GIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG-F-- 421 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~-~-- 421 (543)
.......+|.++++.|+|.++.+++..+... .+.++++|+++||+..+..-+|++.+..+.+..++++..+... +
T Consensus 15 ~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~ 92 (402)
T PRK11902 15 LALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHA 92 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccc
Confidence 3345667899999999999999998766665 5889999999999921100022346666666666655554422 1
Q ss_pred -cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchh
Q 009130 422 -PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCF 500 (543)
Q Consensus 422 -~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~ 500 (543)
.+.+++..++.+++.+...+...++++|.+|+|+|+++.++...+..+|. ++++.+.+.+.+... +|
T Consensus 93 ~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~-i~g~~l~~~l~~~~~-----------gw 160 (402)
T PRK11902 93 ALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAM-LVSGGLALWLADRVL-----------GW 160 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHH-HHHhHHHHHHHhccc-----------CH
Confidence 22344444556666777777888899999999999999999999888887 477777888877532 29
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009130 501 MLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 501 ~~~f~~~~~~~~~~~i~~ 518 (543)
+..|++.++..++..+..
T Consensus 161 ~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999888776655543
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=99.02 E-value=5.2e-09 Score=107.97 Aligned_cols=146 Identities=14% Similarity=0.047 Sum_probs=113.8
Q ss_pred hHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 009130 330 NFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVA 409 (543)
Q Consensus 330 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~ 409 (543)
.+..+.+.++.............|.+.+++|.|+.+.++..+.+.++..++.++.|++.||+|+| +++..+.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r------~~l~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK------AGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHH
Confidence 45555555555555555566678888888999999999999999999999999999999999654 788888888
Q ss_pred HHHHHHHH---h-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 410 MSIGHIAI---A-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 410 ~~i~~~~~---~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
..++.+++ . .++...+++..++.|++.+...+..+.++.|..+++++....++......+|. .++|.+.+.+
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~-~~g~~~g~~l 176 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGA-IIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 88887654 2 34555677788999999999998888888887666666667888888877887 4777665544
No 195
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.02 E-value=1.2e-09 Score=93.13 Aligned_cols=133 Identities=14% Similarity=0.201 Sum_probs=104.5
Q ss_pred HHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHh
Q 009130 371 SLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSE 449 (543)
Q Consensus 371 ~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 449 (543)
+...++..++.++.|++.||++|| +.+..+.....++.+... ..+.....+..++.|++.+...+....++.|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK------PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 355678888999999999999654 566666666666655554 3455556667788899988888888899999
Q ss_pred hcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 450 IFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 450 ~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
.+|+++++++.|+.+....++. .++|.+.+.+.+..+ |+..+++.....+++.+....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGP-LLGPPLGGVLAQFLG------------WRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHH-HHhHHhHHHHhcccc------------hHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999998 488889999887765 88888888877777666655443
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=3.2e-09 Score=103.37 Aligned_cols=177 Identities=14% Similarity=0.130 Sum_probs=122.1
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
++.|.-.+.+..+......+....+.+-++.|+|+.|.+++.++..+.+.+.|+..|.+.||+|.| +...++.+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR------~~~~~s~~ 87 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR------KWTILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch------HHHHHHHH
Confidence 344444444444333333333334455578899999999999999999999999999999999743 34445555
Q ss_pred HHHHHHHHHh--hc--CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 409 AMSIGHIAIA--SG--FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 409 ~~~i~~~~~~--~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
+..+-++... .. +.+.+++..++.|++ |+.++.....+++.||+|++|.+.|+.. .+++|.. +..++...+..
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a-v~q~~~P~v~~ 164 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA-VAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHH-HHHHHHHHHHH
Confidence 5444444333 22 233667777788887 5667888889999999999999999997 6667764 44555555555
Q ss_pred hccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 485 RVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 485 ~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
..+. ..|+.+..+.....++..+..++..+
T Consensus 165 ~~g~---------~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 165 AFGF---------LAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHhh---------HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5430 12788888888888887777666554
No 197
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.00 E-value=1e-09 Score=117.67 Aligned_cols=166 Identities=11% Similarity=0.108 Sum_probs=124.1
Q ss_pred hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc--------
Q 009130 349 MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG-------- 420 (543)
Q Consensus 349 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~-------- 420 (543)
...++++-++++++..+.+++.+.+.++..++.++.|++.||.+|| +.+.++.+++.++.++++.+
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~------~~i~~g~ll~~lg~ll~alphf~~~~y~ 126 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP------IVIGIGCAIMGLGSFLLSLPHFLSGRYS 126 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc------eEEEecHHHHHHHHHHHhChHHhcCCcc
Confidence 3445666677899999999999999999999999999999998654 56667777777777665421
Q ss_pred ------------------------------------------C--cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcch
Q 009130 421 ------------------------------------------F--PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHM 456 (543)
Q Consensus 421 ------------------------------------------~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~ 456 (543)
+ ...++++.++.|+|.+..++...+++.|.+|++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~ 206 (633)
T TIGR00805 127 YSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNS 206 (633)
T ss_pred ccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcccc
Confidence 0 12355788999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC----C--cccc-cc---chhHHHHHHHHHHHHHHHHHHHHH
Q 009130 457 GTIFNTISIACPVGSYICSVRIIGRIYDRVASGE----D--HTCY-GT---HCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 457 g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~----~--~~~~-~~---~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+...|+......+|+ .+++.+++.+.+...+.+ + .... .+ .+|+..|++.+++.++..+..+++
T Consensus 207 ~~~~~i~~~~~~iG~-~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 207 PLYIGILESIAVFGP-AFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHhhh-HHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999998 489888888876532110 0 0000 11 137777888777766665544433
No 198
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.00 E-value=7.7e-08 Score=98.22 Aligned_cols=311 Identities=11% Similarity=0.034 Sum_probs=182.8
Q ss_pred cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcc--h
Q 009130 62 SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQN--F 139 (543)
Q Consensus 62 ~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g--~ 139 (543)
...+..|.++|++| ||..+....+...+..+. ..+.. +|.++ +.|+..+ +
T Consensus 77 i~s~~iG~lSD~~g---------------rk~~L~~~~~~~~l~~~~-----~~~~~----~~~~~----~~~l~g~~~~ 128 (463)
T KOG2816|consen 77 ISSPLIGALSDRYG---------------RKVVLLLPLFGTILPALC-----LLFQG----YWFFL----LLGLSGGFSA 128 (463)
T ss_pred HHHhhhHHhhhhhh---------------hhhhHHHHHHHHHHhHHH-----HHHHH----HHHhh----hcccccchhh
Confidence 35778999999998 999999888887777776 32221 34333 5554333 3
Q ss_pred hhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCccc
Q 009130 140 FNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVDD 218 (543)
Q Consensus 140 ~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (543)
.+....++++|.-. ++|....|+.....+.+..++|.+++.+....+-...+.++....++
T Consensus 129 ~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~------------------ 190 (463)
T KOG2816|consen 129 IFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGIL------------------ 190 (463)
T ss_pred hhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHH------------------
Confidence 44556677888887 67999999999999999999998888775332221122111111111
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCCCCcccc
Q 009130 219 KKHLNAFSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQQDPLAYHEL 298 (543)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (543)
........++|+..+++. ++.+. .+.+
T Consensus 191 ---------------------------------------------~~~y~~~~l~Esl~~~~~------~~~~~--~~~~ 217 (463)
T KOG2816|consen 191 ---------------------------------------------SLLYMLLFLPESLQEKER------SDATL--RELT 217 (463)
T ss_pred ---------------------------------------------HHHHHhhccccccCcccc------ccccc--cccC
Confidence 111111122222211110 00000 0000
Q ss_pred CCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhh-hhhchHHHHH-hhCCCchhhHHHHHHHHHH
Q 009130 299 ADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIA-TMNNIAQVGE-SLHYSTTEINSLISLWSIW 376 (543)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~-~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~ 376 (543)
..+.... ...+ ......+.-.+|..+.+++..++....... ..-..+.++. ..++++.+.+.+.+..++.
T Consensus 218 ~~~~~~~----~~~~----~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~ 289 (463)
T KOG2816|consen 218 PGSLDSS----HVAD----AFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSIL 289 (463)
T ss_pred CCcccch----hhhh----hhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHH
Confidence 0000000 0000 001111122345555555544433222211 1112222332 3599999999999999999
Q ss_pred Hhhhccccc-cchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCc
Q 009130 377 NFFGRFGAG-YGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVR 454 (543)
Q Consensus 377 ~~ig~~~~G-~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~ 454 (543)
..++.++.. .+.-.++.| .++..++....+....+++ ..++..+....+. ...+...+..-+.++...+++
T Consensus 290 ~~i~~l~~~~~l~~~l~~~------~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~ 362 (463)
T KOG2816|consen 290 GIISQLLLLPLLSSILGEK------RLISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPE 362 (463)
T ss_pred HHHHHHHHHHHHHHHHhhh------hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-HhhcchhHHHHhHHHhhcccc
Confidence 999998877 555555432 4777888888888888774 4445545544443 344556677788899999999
Q ss_pred chhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 455 HMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 455 ~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
++|++++++.....+.+ +++|.+.+.++..+-
T Consensus 363 e~g~v~~~is~i~~l~~-~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 363 EQGKVFGIISGIEGLSG-VVSPALYGNIFALTL 394 (463)
T ss_pred cccchhhHHHHHHHHhh-hhhHHHHHHHHHHHH
Confidence 99999999999988888 478888888766553
No 199
>TIGR00898 2A0119 cation transport protein.
Probab=98.99 E-value=1.9e-09 Score=113.73 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=118.9
Q ss_pred chHHHHHhhCCC---chhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 009130 351 NIAQVGESLHYS---TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLF 426 (543)
Q Consensus 351 ~~~~~~~~~g~s---~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 426 (543)
..+.+.++.+++ +.+.++..+++.++..++.++.|+++||+||| +.+.++.++..++.++.. .++...++
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr------~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK------KVLLLSTLVTAVSGVLTAFSPNYTVFL 184 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch------HHHHHHHHHHHHHHHHHHHcccHHHHH
Confidence 456667788888 88999999999999999999999999999654 677777777777766655 45666778
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMI 506 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~ 506 (543)
+..++.|++.+...+....++.|.+|+++|+.+.++...+..+|. +++|.+.+.+.+ |+..|++
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~~~---------------wr~~~~~ 248 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGL-VLLPLVAYFIPD---------------WRWLQLA 248 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhH---------------HHHHHHH
Confidence 888999999999999999999999999999999999988888887 466655544322 8899988
Q ss_pred HHHHHHHHHHHHHH
Q 009130 507 MAFVAFFGSLVAFL 520 (543)
Q Consensus 507 ~~~~~~~~~i~~~~ 520 (543)
.++..++..+..++
T Consensus 249 ~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 249 VSLPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHHHHHh
Confidence 88777766655533
No 200
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.99 E-value=1.2e-08 Score=105.22 Aligned_cols=157 Identities=15% Similarity=0.144 Sum_probs=104.6
Q ss_pred hhhhchHHHHHhhC---CCchh---hHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-
Q 009130 347 ATMNNIAQVGESLH---YSTTE---INSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS- 419 (543)
Q Consensus 347 ~~~~~~~~~~~~~g---~s~~~---a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~- 419 (543)
.+....|.+.++.+ .+..+ .+..++...++..+|.+++|+++||+||| +.+..+.++..++.+..+.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~~~~~~ 113 (432)
T PRK10406 40 VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK------KSMLISVCMMCFGSLVIACL 113 (432)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHhhc
Confidence 33444455666653 44443 33344555666669999999999999654 7888888888887776653
Q ss_pred cCc--------chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCC
Q 009130 420 GFP--------GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGED 491 (543)
Q Consensus 420 ~~~--------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~ 491 (543)
++. ..+.+..++.|++.|+.++...+++.|.+|+++|+.+.++...+...|. ++++.+...+....++.+
T Consensus 114 ~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~- 191 (432)
T PRK10406 114 PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQ-LLALLVVVVLQQTLEDAE- 191 (432)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHH-
Confidence 332 2467788899999999999999999999999999999998877666665 355444333321110000
Q ss_pred ccccccchhHHHHHHHHHHHHHH
Q 009130 492 HTCYGTHCFMLSFMIMAFVAFFG 514 (543)
Q Consensus 492 ~~~~~~~~~~~~f~~~~~~~~~~ 514 (543)
....+||..|++.++..++.
T Consensus 192 ---~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 192 ---LREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred ---HhccchHHHHHHHHHHHHHH
Confidence 00124999998876655543
No 201
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.98 E-value=1.7e-08 Score=103.47 Aligned_cols=176 Identities=12% Similarity=0.066 Sum_probs=117.6
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCch-HHHHHHHHHHHHHHHHHhh-cCc--
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARP-IFMVITLVAMSIGHIAIAS-GFP-- 422 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~-~~~~~~~~~~~i~~~~~~~-~~~-- 422 (543)
....++++|++++|.+....+....+..+.+.+..++.|+++||...|. +|+ +.+..+.+..+++++++.. .+.
T Consensus 22 l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~--GRRrp~il~g~~~~~~~l~ll~~~~~~~~ 99 (477)
T TIGR01301 22 LQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF--GRRRPFIAAGAALVAFAVILIGFAADIGH 99 (477)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC--CChHHHHHHHHHHHHHHHHHHHhCchhhh
Confidence 3455677788899999999999999999999999999999999632221 333 3444445555555555542 111
Q ss_pred ---------------chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcch--hhHHHHHHhhhhhhhhhhhhhhhhhh--h
Q 009130 423 ---------------GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHM--GTIFNTISIACPVGSYICSVRIIGRI--Y 483 (543)
Q Consensus 423 ---------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~ig~~i~~~~l~g~l--~ 483 (543)
....+...+..++.+...+...++++|..|++++ +.+++......++|+ ++++.+.+.. .
T Consensus 100 ~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~-ilg~~~g~~~~~~ 178 (477)
T TIGR01301 100 LFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN-VLGYAAGAYSGLY 178 (477)
T ss_pred hccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHH
Confidence 0112223344556777777778899999998865 678998888888888 4777666553 2
Q ss_pred hhccCCCCccc-cccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 484 DRVASGEDHTC-YGTHCFMLSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 484 ~~~g~~~~~~~-~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
+..+-..+..| ....+++..|++.+++.+++.++.++..+|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 179 KIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 22221111111 1233689999999998888888887766654
No 202
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.98 E-value=5.3e-09 Score=89.19 Aligned_cols=119 Identities=12% Similarity=0.104 Sum_probs=99.3
Q ss_pred ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhh
Q 009130 63 AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNT 142 (543)
Q Consensus 63 ~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~ 142 (543)
.+++.|++.||+| ||+.+..+..+..++.+. ....++ .+.+.+.+++.|++.+...+
T Consensus 14 ~~~~~g~~~d~~g---------------~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~g~~~~~~~~ 70 (141)
T TIGR00880 14 YSPLSGLLTDRFG---------------RKPVLLVGLFIFVLSTAM-----FALSSN---ITVLIIARFLQGFGAAFALV 70 (141)
T ss_pred HHhhHHHHHhhcc---------------hhHHHHHHHHHHHHHHHH-----HHHhcc---HHHHHHHHHHHHHHHHHHHH
Confidence 4678889999998 999999999988888887 444555 78888899999999999989
Q ss_pred hHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHH
Q 009130 143 GNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLF 204 (543)
Q Consensus 143 ~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 204 (543)
.....+.|.+| ++|+++.++......+|..+++.+.+.+.+..+|++.+....+..++..+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 88899999998 679999999999999999999999999887777877766655554444333
No 203
>PRK09952 shikimate transporter; Provisional
Probab=98.97 E-value=3e-08 Score=102.53 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=98.2
Q ss_pred CCCchhhHHHH-----HHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc--------hH
Q 009130 360 HYSTTEINSLI-----SLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPG--------NL 425 (543)
Q Consensus 360 g~s~~~a~~~~-----~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~--------~~ 425 (543)
+.++.+ +... ++..++..+|.++.|+++||+||| +.+..+.++..++.++.+. ++.. .+
T Consensus 56 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (438)
T PRK09952 56 QVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK------RMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLL 128 (438)
T ss_pred CCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 566553 3332 234455678888999999999654 6788888888888777663 3432 36
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
.+..++.|++.|+.++....++.|.+|+++|+...+....+..+|.. +++.+...+....+.. .+...+||..|+
T Consensus 129 ~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~-l~~~~~~~l~~~~~~~----~~~~~gWr~~f~ 203 (438)
T PRK09952 129 VTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL-LSTGLVSLISMMTTDE----QFLSWGWRIPFL 203 (438)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHH----HhhccChHHHHH
Confidence 66788999999999988889999999999999999998888888874 5554554443221100 001124999998
Q ss_pred HHHHHHH
Q 009130 506 IMAFVAF 512 (543)
Q Consensus 506 ~~~~~~~ 512 (543)
+.++..+
T Consensus 204 ~~~~~~l 210 (438)
T PRK09952 204 FSIVLVL 210 (438)
T ss_pred HHHHHHH
Confidence 7766543
No 204
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.97 E-value=5.4e-09 Score=106.09 Aligned_cols=151 Identities=9% Similarity=0.022 Sum_probs=108.6
Q ss_pred hhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 009130 346 IATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGN 424 (543)
Q Consensus 346 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~ 424 (543)
..+...+|.+.++.|.|..+.+...+.+.+...++.++.|.++||++|++. . +..+.+..+.. ...... .++.+.
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~-~-~~~~~~~~~~~--~~~~~~~~~~~~~ 96 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP-A-LRLLALLTLLF--AVAFWFGAHSFWL 96 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH-H-HHHHHHHHHHH--HHHHHHhcccHHH
Confidence 345677888999999999999999999999999999999999999987421 1 11222222111 111122 244455
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
+++..++.|++.+...+...+++.+. .++++.++|.....+.+|. .++|.+.+++.+..| |+..|
T Consensus 97 l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~-~igp~lgg~l~~~~g------------~~~~f 161 (382)
T PRK11128 97 LFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAF-VIGSALTGKLVSWFG------------EQAIL 161 (382)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHH-HHHHHHHHHHHHHcC------------hhHHH
Confidence 56666777888777777666666664 4567888888888888887 589999999999887 99999
Q ss_pred HHHHHHHHHHH
Q 009130 505 MIMAFVAFFGS 515 (543)
Q Consensus 505 ~~~~~~~~~~~ 515 (543)
++.++..++..
T Consensus 162 ~~~~~~~~~~~ 172 (382)
T PRK11128 162 WILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHH
Confidence 87776544443
No 205
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.96 E-value=4e-09 Score=105.06 Aligned_cols=176 Identities=18% Similarity=0.233 Sum_probs=138.7
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHH-h----hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGE-S----LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVI 405 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~-~----~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~ 405 (543)
++.++..=+.=-+++|++-..+..|+. + +|+|++++..+++.+..-.=+..+++||++||+- ++++++..
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L-----G~~~tI~l 97 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL-----GTRRTIVL 97 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc-----chhHHHHH
Confidence 344443333333344444444444442 2 4599999999999998888889999999999983 66789999
Q ss_pred HHHHHHHHHHHHhhc---CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc--hhhHHHHHHhhhhhhhhhhhhhhhh
Q 009130 406 TLVAMSIGHIAIASG---FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH--MGTIFNTISIACPVGSYICSVRIIG 480 (543)
Q Consensus 406 ~~~~~~i~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~ig~~i~~~~l~g 480 (543)
+.++++++.++++.. .+..++++.+++++|.|..=+...+++.|.+|+++ |-..+++..++.++|+ +++|++.+
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs-l~~p~i~~ 176 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS-LIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH-HHHHHHHH
Confidence 999999999988843 46778999999999999988999999999999764 5567777789999998 59999999
Q ss_pred hhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 481 RIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 481 ~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
++.+..| |+..|-..++-+..+.+..+..+++
T Consensus 177 ~~~~~~g------------~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 177 LLAINYG------------WHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHhhC------------HHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999987 9999999999999998877666543
No 206
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.95 E-value=1.7e-08 Score=106.37 Aligned_cols=150 Identities=16% Similarity=0.145 Sum_probs=107.4
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cC------cchHHHHHHHHH
Q 009130 361 YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GF------PGNLFVGTMIVG 433 (543)
Q Consensus 361 ~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~------~~~~~~~~~l~G 433 (543)
.+..+.+++.+...++..++.+++|+++||+||| +.+.++.++..++.++... .+ ...+++..++.|
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRK------RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLG 126 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHH
Confidence 4455678889999999999999999999999654 6777777777666655442 22 245777888999
Q ss_pred hhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccC----CC-C----ccc--cccchhHH
Q 009130 434 VCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVAS----GE-D----HTC--YGTHCFML 502 (543)
Q Consensus 434 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~----~~-~----~~~--~~~~~~~~ 502 (543)
++.|...+..+.++.|.+|+++|+.+.++......+|. ++++.+...+...... .+ . ..+ ....+||.
T Consensus 127 ~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~ 205 (502)
T TIGR00887 127 VGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI-LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI 205 (502)
T ss_pred HHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccccccccccccccccccchhcccHHH
Confidence 99999999999999999999999999999988888887 4666665544331110 00 0 000 01125999
Q ss_pred HHHHHHHHHHHHHHH
Q 009130 503 SFMIMAFVAFFGSLV 517 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~ 517 (543)
.|.+.++..++..+.
T Consensus 206 ~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 206 LIGFGAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHHHHHH
Confidence 997776655554444
No 207
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.94 E-value=1.4e-08 Score=102.01 Aligned_cols=169 Identities=14% Similarity=0.018 Sum_probs=114.9
Q ss_pred hhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH-HHHHHHHHHHHHHHHHhhc----Cc
Q 009130 348 TMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI-FMVITLVAMSIGHIAIASG----FP 422 (543)
Q Consensus 348 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~-~~~~~~~~~~i~~~~~~~~----~~ 422 (543)
....+|.+.++.|+|.++.+..... .+...+ ++++|+++||+..|+ ++|++ .+..+.+...+....+... +.
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~-~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPF-FGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCC-CCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 3456788899999999999988655 444444 889999999985321 23444 4555666665554444421 11
Q ss_pred chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 423 GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 423 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
..+....++.+++.+...+...+++.|.+|+|+|+.+.|+...+..+|. ++++.+.+.+.+..+..+ ....+|+.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~l~~~l~~~~g~~~----~~~~~wr~ 158 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGM-LLSGSLALVLASPEFANT----GLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHH-HHHHHHHHHHhhhccccc----ccccccHH
Confidence 2233344455666666667778899999999999999999999998988 478888888877654100 12235999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 009130 503 SFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.|++.++..++..+..++..+|
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 9998888777766555544444
No 208
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.94 E-value=5.1e-09 Score=107.28 Aligned_cols=148 Identities=16% Similarity=0.219 Sum_probs=126.7
Q ss_pred hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh---hcCcchHHHHHHHHHh
Q 009130 358 SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA---SGFPGNLFVGTMIVGV 434 (543)
Q Consensus 358 ~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~l~G~ 434 (543)
++.++.++-+++++....+.+++.+..|++.||+|.| +++..+.++.++..++.. ..+.+.+++..++.|+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r------~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR------RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 3578899999999999999999999999999999754 577777777777766654 2344567888999999
Q ss_pred hhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhh-ccCCCCccccccchhHHHHHHHHHHHHH
Q 009130 435 CYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDR-VASGEDHTCYGTHCFMLSFMIMAFVAFF 513 (543)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~-~g~~~~~~~~~~~~~~~~f~~~~~~~~~ 513 (543)
+.|..++....+..+-.|+++|++..++...+..+|.+ ++-++.|++-+. .| |+..||+.+++.++
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v-~~mp~sg~lc~s~~G------------W~sifY~~g~~g~i 207 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTI-ITMPVSGLLCESSLG------------WPSIFYVFGIVGLI 207 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccCCC------------CchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 666689999998 55 99999999999888
Q ss_pred HHHHHHHHhhc
Q 009130 514 GSLVAFLLFLR 524 (543)
Q Consensus 514 ~~i~~~~~~~~ 524 (543)
-.++.+++..+
T Consensus 208 ~~~~w~~~~~d 218 (466)
T KOG2532|consen 208 WFILWFLFYSD 218 (466)
T ss_pred HHHHHHHHhcC
Confidence 88877766653
No 209
>PRK15075 citrate-proton symporter; Provisional
Probab=98.93 E-value=3.2e-08 Score=102.25 Aligned_cols=166 Identities=14% Similarity=0.094 Sum_probs=109.8
Q ss_pred HHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHH-HHH-----HHHHhhhccccccchhhhhhhcCCCchHHHHH
Q 009130 332 WFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLI-SLW-----SIWNFFGRFGAGYGSDVFLHKLGWARPIFMVI 405 (543)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~-~~~-----~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~ 405 (543)
...++..++.......+....|.+.++++.++.+.+.+. +.. .+...+|.++.|+++||+||| +.+..
T Consensus 18 ~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr------~~l~~ 91 (434)
T PRK15075 18 LRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR------KGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH------HHHHH
Confidence 344444555545555566677888888988776644332 222 233346888999999999654 67777
Q ss_pred HHHHHHHHHHHHhh-cCcc--------hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 406 TLVAMSIGHIAIAS-GFPG--------NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 406 ~~~~~~i~~~~~~~-~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
+.++..++.++... ++.. .+++..++.|++.+...+....+++|.+|+++|+++.++......++. .+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~-~~g~ 170 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV-VFAA 170 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH-HHHH
Confidence 88777777776663 3332 246678899999998888888999999999999999999887776665 3555
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
.+++.+........ ....+|+..|++..
T Consensus 171 ~~g~~l~~~~~~~~----~~~~gWr~~f~~~~ 198 (434)
T PRK15075 171 LLGYLLNQWLSPAQ----MAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhCCHHH----HhccchHHHHHHHH
Confidence 45444421110000 00123999998754
No 210
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.92 E-value=1.8e-07 Score=90.14 Aligned_cols=90 Identities=11% Similarity=-0.025 Sum_probs=70.2
Q ss_pred HHHhhcCCChhhHHHHHHHhhhc-ccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 009130 38 TLKSTQNYDQSTLERVAVFKDMG-GSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGL 116 (543)
Q Consensus 38 ~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~ 116 (543)
.+-+++|.+..|++.+....... .+++.+.|.++||+| ||+.-++-+++.+++++. ..
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~G---------------rk~~cl~~cily~~scl~-----k~- 117 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYG---------------RKKACLLFCILYSLSCLT-----KH- 117 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------chHHHHHHHHHHHHHHHH-----Hh-
Confidence 44468999999999554544444 458999999999999 999888888888888876 33
Q ss_pred CCCCChHHHHHHHHHHHhcCcchhhhhHHHHH-hhh
Q 009130 117 LPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTG-VMN 151 (543)
Q Consensus 117 ~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~-~~~ 151 (543)
.++ ++.++++|++.|++.+..+.+--+.. .|+
T Consensus 118 ~~~---~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 118 SSN---YPVLLLGRVLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred ccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344 89999999999999999888766543 444
No 211
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.91 E-value=1.1e-08 Score=118.91 Aligned_cols=178 Identities=12% Similarity=0.036 Sum_probs=120.9
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhchHHH----H-HhhCCC-chhhHHHHHHHHHHHhhhccccccchhhhhhhcCC
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNIAQV----G-ESLHYS-TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGW 397 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~----~-~~~g~s-~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~ 397 (543)
.+++++.|..+++..++...........++.+ . .+.+.+ ....++..+++.+..++..++.|+++||++||
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk--- 82 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA--- 82 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH---
Confidence 45677777777777666554432222111111 1 112222 23466677788899999999999999999765
Q ss_pred CchHHHHH----HHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhh
Q 009130 398 ARPIFMVI----TLVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYI 473 (543)
Q Consensus 398 ~r~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i 473 (543)
+++.. ..+....+...+...+.+.+++..++.|++.+...+...+++.+.+++++++.++|+..++..+|. +
T Consensus 83 ---~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~-~ 158 (1140)
T PRK06814 83 ---KLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI-L 158 (1140)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH-H
Confidence 33221 112222222222235667788889999999999999999999999999999999999999999998 5
Q ss_pred hhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 474 CSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 474 ~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
++|.++|++.+..+ |+..|.....+.+++.++.+.
T Consensus 159 igp~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 193 (1140)
T PRK06814 159 LGTIIGGLATISGN------------FVILVALLMGIAVLGWLASLF 193 (1140)
T ss_pred HHHHHHHHHHhccc------------cHHHHHHHHHHHHHHHHHHhh
Confidence 89999999998776 888884444444444443333
No 212
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.88 E-value=5.3e-09 Score=99.98 Aligned_cols=115 Identities=18% Similarity=0.156 Sum_probs=97.3
Q ss_pred CchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhh
Q 009130 362 STTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQW 440 (543)
Q Consensus 362 s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~ 440 (543)
+...+|.+-+.+++.+++.++.+|.++||+|| |+++..+++..++.+++.+. .+...+.++.++.|+..|- .
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGR------kpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l 138 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGR------KPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-L 138 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-h
Confidence 44578888999999999999999999999955 58898888888888887774 3443455558888887665 5
Q ss_pred hhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 441 SLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 441 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
+...++++|++++|+++.+++.++++..+|- ++||.++|++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGf-ilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGF-ILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcch-hhcchhhhHHHh
Confidence 6788999999999999999999999999997 699999999877
No 213
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.4e-08 Score=102.60 Aligned_cols=156 Identities=17% Similarity=0.232 Sum_probs=120.2
Q ss_pred HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhh
Q 009130 357 ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGVCY 436 (543)
Q Consensus 357 ~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~ 436 (543)
+|.++...+.+.+.+++.++.+++.+.++.+.||+.-. +.+...+.+..+.+.+.....+.+.+.+..++.|+..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 56678888999999999999999999999999999521 1222222333333333333567778888899999999
Q ss_pred hhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 437 GSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 437 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
++.+|....++...|++++++...|+.+....+|+ ++|.++...+....+. .+..+|++.|++-++++++..+
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~-i~ggliA~g~~~~~~~------~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN-IFGGLIAYGVFKLNGS------GGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh-HHHHHHHHHhhhhcCC------CCcCCceeehhHHHHHHHHHHh
Confidence 99999999999999999999999999999999998 4777777665443321 1345699999999999888887
Q ss_pred HHHHHhhc
Q 009130 517 VAFLLFLR 524 (543)
Q Consensus 517 ~~~~~~~~ 524 (543)
+.++..+.
T Consensus 222 ~~f~~lp~ 229 (495)
T KOG2533|consen 222 VVFFFLPD 229 (495)
T ss_pred eEEEEecC
Confidence 76665543
No 214
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.84 E-value=1.8e-08 Score=103.30 Aligned_cols=155 Identities=9% Similarity=0.041 Sum_probs=107.8
Q ss_pred ccHHHHhhcCCCh--------hhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHH
Q 009130 35 YSSTLKSTQNYDQ--------STLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTG 105 (543)
Q Consensus 35 ~~~~l~~~~~~s~--------~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g 105 (543)
+.+...++.+.++ ++.+...+...+... ..++.|++.||+| +|+++.++.++.+++
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g---------------~r~~l~~~~~~~~v~ 294 (418)
T TIGR00889 230 FGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG---------------IKKVMLLSLVAWALR 294 (418)
T ss_pred hHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHHHH
Confidence 3344445566443 445544444444443 5778999999998 999999999998888
Q ss_pred HHHHHHHHhccCC-CCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHH-HhhhhhHHHHHHHHHHhc
Q 009130 106 YFLVWASVVGLLP-RPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILK-GFVGLSGAVLTQVYKTVC 182 (543)
Q Consensus 106 ~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~-~~~~lg~~i~~~l~~~l~ 182 (543)
..+ ..... +....+.+++.+++.|++.+...+.....+++++| ++||+++|+.+ ...++|.+++|++.+.+.
T Consensus 295 ~~l-----~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 295 FGF-----FAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHH-----HHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 766 22222 11014566778999999999888888889999999 67999999997 678899999999999887
Q ss_pred CC------CchhHHHHHHHH-HHHHHHHHHhhee
Q 009130 183 NG------NPSTYILVLALL-PTLVSLLFMSHVR 209 (543)
Q Consensus 183 ~~------~~~~~~~~~~~~-~~~~~~~~~~~~~ 209 (543)
+. .+|+..+....+ ..+.+++...+++
T Consensus 370 ~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 370 EKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 54 246665554443 3344444444444
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.81 E-value=3.2e-08 Score=102.35 Aligned_cols=169 Identities=11% Similarity=0.110 Sum_probs=110.5
Q ss_pred hhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc----
Q 009130 349 MNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFP---- 422 (543)
Q Consensus 349 ~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~---- 422 (543)
..+++.+++ +.|+++.+++.+.++..+..++..++.|+++||.++|.+ +|++.+..+.+...++.+++. .++.
T Consensus 19 ~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~G-rrr~~i~~~~~~~~i~~~~~~~~~~~~~~~ 97 (437)
T TIGR00792 19 STYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWG-KFRPWLLIGAIPFSIVLVLLFTTPDFSATG 97 (437)
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCC-CcchhHHHhHHHHHHHHHHHHhCCCCCcch
Confidence 344555554 579999999999999999999999999999999876542 335666667666666655444 2221
Q ss_pred --chHHHHHHHHHhhhhhhhhhHHHHHHhhc-CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccch
Q 009130 423 --GNLFVGTMIVGVCYGSQWSLMPTITSEIF-GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHC 499 (543)
Q Consensus 423 --~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~ 499 (543)
....+..++.+.+.+.......++.+|.. ++++|++..+.......+|.. +.+.+.+.+....+..+ ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~-l~~~~~~~l~~~~~~~~-----~~~g 171 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGL-LVAVIVLPLVSYFGGGD-----DKFG 171 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----cccc
Confidence 12233345556666665556667778876 467899999988777777764 44334444443222100 1125
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 500 FMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
|+..+.+.+++.++..++..+..+|
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e 196 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKE 196 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 9988888888777776665544443
No 216
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.80 E-value=6.4e-08 Score=102.11 Aligned_cols=142 Identities=22% Similarity=0.237 Sum_probs=113.6
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhH
Q 009130 365 EINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLM 443 (543)
Q Consensus 365 ~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~ 443 (543)
+.+++.+...++..+|.++.|+++|++||| ..+.++.+...++.++.+ ..+...+++..++.|+|.|......
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk------~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~ 163 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRK------KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLA 163 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcc
Confidence 348999999999999999999999999654 788889888888888776 5677889999999999999999999
Q ss_pred HHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 444 PTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 444 ~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|.+++|+.|++.||...+.......+|- +++ ++.+...++.. .+||..+.+..+.+++..+. .+..+
T Consensus 164 piy~sEiap~~~RG~l~~~~~l~~~~Gi-~~~-~~~~~~~~~~~----------~~Wr~~~~~~~i~~~~~~~~-~~~~p 230 (513)
T KOG0254|consen 164 PVYISEIAPAHIRGTLVSLYQLFITIGI-LLG-YCINYGTSKVY----------AGWRIPLGLALIPAVILALG-MLFLP 230 (513)
T ss_pred hhhHhhcCChhhhHHHHHHHHHHHHHHH-HHH-HHHhhhhccCC----------ccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence 9999999999999999999988877665 354 44554444320 13998888877777776666 44444
Q ss_pred cc
Q 009130 524 RT 525 (543)
Q Consensus 524 ~~ 525 (543)
+.
T Consensus 231 es 232 (513)
T KOG0254|consen 231 ES 232 (513)
T ss_pred CC
Confidence 43
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.80 E-value=5.4e-08 Score=113.32 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=112.0
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhch-HHHHHhhCCCc--hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCch
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIATMNNI-AQVGESLHYST--TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARP 400 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~s~--~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~ 400 (543)
+.++++.|+.+++..++...........+ +.+..+++.+. ...++..+++.++..++.+++|+++||+|||
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------ 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------ 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence 34566777777766666544333332223 33334444443 3467788899999999999999999999665
Q ss_pred HHHHHHHHHHHHHHHHHh----hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 401 IFMVITLVAMSIGHIAIA----SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 401 ~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
+++.++.++.++..++.. ..+...+++..++.|++.+...+...++++|.+++++++.+.|+..++..+|. ++++
T Consensus 78 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~-~lg~ 156 (1146)
T PRK08633 78 RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI-LAGT 156 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH-HHHH
Confidence 566666554443333221 34556677788899999998888889999999999999999999999999998 5889
Q ss_pred hhhhhhhhh
Q 009130 477 RIIGRIYDR 485 (543)
Q Consensus 477 ~l~g~l~~~ 485 (543)
.+++++.+.
T Consensus 157 ~l~~~l~~~ 165 (1146)
T PRK08633 157 ALFSFLFES 165 (1146)
T ss_pred HHHHHHHHh
Confidence 889988776
No 218
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.79 E-value=2.3e-06 Score=86.38 Aligned_cols=318 Identities=11% Similarity=-0.023 Sum_probs=176.5
Q ss_pred HHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 009130 54 AVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTA 133 (543)
Q Consensus 54 ~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 133 (543)
+..+....+.+++.+.+.|+.| +|+.+.+|....+.-.+.+ +-.| -+.+++..++.
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~---------------~K~~lv~ga~~y~~f~~gf------l~~N---~y~~yfssall 112 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLG---------------PKWALVIGATCYAAFPLGF------LFPN---SYYLYFSSALL 112 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhh---------------HHHHHHHHhHHHHHHHHHH------Hhcc---hHHHHHHHHHh
Confidence 3444444457889999999999 9999999999887766652 1244 57788899999
Q ss_pred hcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccC
Q 009130 134 AHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYG 212 (543)
Q Consensus 134 G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (543)
|+|.+..+..--.+++++.. +++.+..++.-+....+.++|+.+.-.+.. .....
T Consensus 113 G~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~------------------------~~~~~ 168 (461)
T KOG3098|consen 113 GFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQ------------------------FSSSS 168 (461)
T ss_pred hhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeE------------------------ecccc
Confidence 99999999988899999997 678999999888888887777643322210 01100
Q ss_pred CCCcc-cchhhh-h-HHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCC
Q 009130 213 TNSVD-DKKHLN-A-FSAVAMTLAAYFMVITVMENLLTFSLWARIITFIILLLLLASPLRVAITADREDAMTSPKLSTPQ 289 (543)
Q Consensus 213 ~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (543)
...++ +.+... . +..+-+. ....+......+........ |.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~-----------------------~~~~v~~~~~~l~~i~~~~~-p~~~~--------- 215 (461)
T KOG3098|consen 169 AIITDGTRRLVFEVLFIDFEIK-----------------------VLFGVLLAISVLSIINFDFL-PSKDV--------- 215 (461)
T ss_pred cccccchhhhhcchhhhhHHHH-----------------------HHHHHHHHHHHHHhhheeec-Cccch---------
Confidence 00000 000000 0 0000000 00000000000000000000 00000
Q ss_pred CCCCCccccCCCccchhcccccccchhhcchhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHH---hhCCCch-h
Q 009130 290 QDPLAYHELADDESKVTAAFDDKILKDEEDMNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGE---SLHYSTT-E 365 (543)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~---~~g~s~~-~ 365 (543)
..+.+ ..+....+..+...+++++++...+...++.............|.... ..+.+.. -
T Consensus 216 ----------~~~~~-----~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~ 280 (461)
T KOG3098|consen 216 ----------VNCKS-----SSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYL 280 (461)
T ss_pred ----------hhhhh-----hccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhH
Confidence 00000 000011111123356677888777776665543333333444444332 2333332 2
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hc--C---------------cchHH
Q 009130 366 INSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA--SG--F---------------PGNLF 426 (543)
Q Consensus 366 a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~~--~---------------~~~~~ 426 (543)
.+......+++..++....+.+++|..+. +|.+++.++.++..+.+++.. .+ . .....
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~f---g~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ 357 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGF---GRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLAL 357 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhc---ccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHH
Confidence 33334455666777777778888777544 777888777777666655432 11 1 01234
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 427 VGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 427 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
+..++.|++-....+..+.++.+.. ++++.++.++.-.-..+++
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHH
Confidence 4556778888887777888888888 5888888888866666655
No 219
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=7.3e-08 Score=102.09 Aligned_cols=138 Identities=17% Similarity=0.062 Sum_probs=116.1
Q ss_pred hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhh
Q 009130 358 SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCY 436 (543)
Q Consensus 358 ~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~ 436 (543)
....+.....+..+++.++..+|.+++|.++||+|| ++++..+.++..++.+..+ .++...+.+..++.|++.
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR------k~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~ 185 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR------KPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFG 185 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc------HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhc
Confidence 346677788888999999999999999999999954 5888889988888876666 567778899999999999
Q ss_pred hhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 437 GSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 437 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
++.......++.|.+++++|+.+..+ ......++. +.+.+.+++.. + ||+.+++.....++.++
T Consensus 186 ~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~-~~~~~~a~~~~--~------------Wr~~~~~~~~~~~~~~~ 249 (521)
T KOG0255|consen 186 SGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGL-MLPAGAAYITR--D------------WRWLFWIISIPSGLFLL 249 (521)
T ss_pred cchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHH-HHHHHHHHHHh--h------------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 666666664 56667777766 2 99999998888877766
Q ss_pred H
Q 009130 517 V 517 (543)
Q Consensus 517 ~ 517 (543)
+
T Consensus 250 ~ 250 (521)
T KOG0255|consen 250 L 250 (521)
T ss_pred H
Confidence 6
No 220
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.70 E-value=2.6e-07 Score=93.73 Aligned_cols=131 Identities=19% Similarity=0.216 Sum_probs=92.4
Q ss_pred HHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc--------hHHHHHHHHHhhhhhhhhhHHH
Q 009130 375 IWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPG--------NLFVGTMIVGVCYGSQWSLMPT 445 (543)
Q Consensus 375 i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~--------~~~~~~~l~G~~~g~~~~~~~~ 445 (543)
+...++.++.|+++||+||| +.+..+.++..++.++... ++.. .+++..++.|++.+...+..+.
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRK------KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhH------HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 34457889999999999654 6777788887777766653 3322 2566678889998888888899
Q ss_pred HHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHH
Q 009130 446 ITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSL 516 (543)
Q Consensus 446 ~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 516 (543)
++.|.+++++|+...+....+..+|.. +++.+.+.+.+..+... ....+|+..|++.+.+.+++..
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~~~~~~~~~~~~~~----~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLL-LAALTVLLLSYLLGDDA----LLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHH----hhccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888874 67666555433211000 0012489888877665555433
No 221
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.69 E-value=2.5e-07 Score=96.19 Aligned_cols=153 Identities=12% Similarity=0.062 Sum_probs=123.7
Q ss_pred chHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHH-H
Q 009130 351 NIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFV-G 428 (543)
Q Consensus 351 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~-~ 428 (543)
..+.+.++++.+..+.+++.++......+..++.+.+.||+|.| .+.+.+.++..+++++..+ .+.+.+++ .
T Consensus 68 ~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R------~v~i~G~~v~~~g~~lssF~~~i~~l~lt~ 141 (509)
T KOG2504|consen 68 LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR------TVMIAGGLVAALGLLLSSFATSLWQLYLTF 141 (509)
T ss_pred hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34556667788888899999999999999999999999999654 7888899888888887663 44444443 4
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 429 TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 429 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
-++.|+|.+..+.....++...|. ++|+.+.|+...+..+|.+++ |.+..++.+..| |+..+++.+
T Consensus 142 gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~~G------------~r~~~l~~~ 207 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF-PPLLKYLLSKYG------------WRGALLIFG 207 (509)
T ss_pred HHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH-HHHHHHHHHHhC------------cHHHHHHHH
Confidence 667788988888777777776665 899999999999999999765 458888999988 999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 009130 509 FVAFFGSLVAFLLFL 523 (543)
Q Consensus 509 ~~~~~~~i~~~~~~~ 523 (543)
.+.+-.++....+++
T Consensus 208 ~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 208 GISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHcCC
Confidence 888777777666655
No 222
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.67 E-value=3.1e-07 Score=93.48 Aligned_cols=170 Identities=11% Similarity=-0.022 Sum_probs=104.8
Q ss_pred HHHHhhhchhhhhhhchHHHHHhhCCCchhhHHH--HHHHHHHHhhhcccc-ccchhhhhhhcCCCchHHHHHHHHHHHH
Q 009130 336 IATLCGMGSGIATMNNIAQVGESLHYSTTEINSL--ISLWSIWNFFGRFGA-GYGSDVFLHKLGWARPIFMVITLVAMSI 412 (543)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~--~~~~~i~~~ig~~~~-G~lsD~~~~~~~~~r~~~~~~~~~~~~i 412 (543)
..++............+|.++++.|+|.++.+.+ .++..+...+..++. ++.+||.|||+ ..+....++...
T Consensus 8 ~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~-----~~i~~~~~~~~~ 82 (390)
T TIGR02718 8 LLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRR-----SWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcch-----hHHHHHHHHHHH
Confidence 3344333333445678899999999999999997 456677777766666 55788887642 222222222221
Q ss_pred HHHHHh---hc-C-cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 413 GHIAIA---SG-F-PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 413 ~~~~~~---~~-~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
+...+. .. + ..+......+..++....-+..-.+..|..++++++...+....+..+|. ++++...+++.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~-~~g~~~~~~l~~~~g 161 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGF-FGGGAGTLVLFGKFG 161 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC
Confidence 122221 11 1 11222223333344444444445566777777777777777777777777 477777888888887
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 488 SGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 488 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|+..|++.+++.++..+..+++.+
T Consensus 162 ------------w~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 162 ------------QRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999888777666555543
No 223
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.56 E-value=7.1e-07 Score=92.21 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=127.0
Q ss_pred hhhHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhccccccccccccccc
Q 009130 10 NSKWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFL 88 (543)
Q Consensus 10 ~~~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~ 88 (543)
+.|-....+...+....|..........+-.+++|++..|...+.....+.++ +.++.|++.||+|
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g------------- 345 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFG------------- 345 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 33444334334434445555455555567788999999999866666666655 6778999999999
Q ss_pred CCch--HHHHHHHHHHHHHHHHHHH--H--HhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhH
Q 009130 89 RGPW--VVHFTGAILCFTGYFLVWA--S--VVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVG 161 (543)
Q Consensus 89 ~g~r--~~~~~g~~~~~~g~~~~~~--~--~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~g 161 (543)
.| +++.+++++..+-.+...+ . ..+ .++ -+.+.+..++.|+..|...+.+-++.++..| +|.+..+|
T Consensus 346 --~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g-~~~---~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFg 419 (477)
T PF11700_consen 346 --PKTKRTLLISLILWIIIPLYGLFGFWPSFFG-LKS---PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFG 419 (477)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHHHhhhcccC-ccc---HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHH
Confidence 88 8888887777554444111 0 011 233 6889999999999999999999999999999 57899999
Q ss_pred HHHHhhhhhHHHHHHHHHHhcCCCc-hhHHHHHHHHHHHHHHHHHhhee
Q 009130 162 ILKGFVGLSGAVLTQVYKTVCNGNP-STYILVLALLPTLVSLLFMSHVR 209 (543)
Q Consensus 162 i~~~~~~lg~~i~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 209 (543)
++....-.++.++|.+.+.+.+..+ -|+-+....+..+++++.+..++
T Consensus 420 ly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 420 LYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999988875432 44444444444445544444443
No 224
>PRK09669 putative symporter YagG; Provisional
Probab=98.55 E-value=1.5e-06 Score=90.07 Aligned_cols=168 Identities=10% Similarity=0.070 Sum_probs=103.4
Q ss_pred hhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH-HhhcC--c--
Q 009130 349 MNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIA-IASGF--P-- 422 (543)
Q Consensus 349 ~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~-~~~~~--~-- 422 (543)
..+++.+++ +.|+|+.+++.++++..+..++..++.|+++||...|.+ +|++.+..+.+...+...+ +..++ .
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~G-rrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHG-QFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCC-CcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 445555554 579999999999999999999999999999999765532 2355666666665555543 32322 1
Q ss_pred --chHHHHHHHHHhhhhhhhhhHHHHHHhhc-CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccch
Q 009130 423 --GNLFVGTMIVGVCYGSQWSLMPTITSEIF-GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHC 499 (543)
Q Consensus 423 --~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~ 499 (543)
...++..++.+.++........++.+|.. ++++|.+..+.-.....+|.. +++.+...+....+..+ ...+
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~-i~~~~~~pl~~~~~~~~-----~~~g 181 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL-IVSVIALPLVDILGKGD-----EQKG 181 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----hhhh
Confidence 12233334556666666666667888887 457788877776666666553 33333333333322100 0124
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 500 FMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|+..+.+.+++..+..+++++..+
T Consensus 182 ~~~~~~i~~ii~~v~~~~~~~~~~ 205 (444)
T PRK09669 182 YFYAMMVMGLLGVVLFFCCFFMTK 205 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeE
Confidence 777777777766666555554433
No 225
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.54 E-value=4.4e-05 Score=75.90 Aligned_cols=105 Identities=12% Similarity=0.009 Sum_probs=68.8
Q ss_pred chhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCcchHHHHHHHHHhhhhh
Q 009130 363 TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----SGFPGNLFVGTMIVGVCYGS 438 (543)
Q Consensus 363 ~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l~G~~~g~ 438 (543)
..+..+....+.++..++|--.-.+ |+ ++.+.+.+..++-.+.+++-+ .++.+..++.++..|+..|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri------r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI------RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh------hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 3456677778898888888654332 22 233444333333222222211 23445555667777999999
Q ss_pred hhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 439 QWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
.+......+.|..++++|--+.|...++-..|-. ++.
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~-lAg 388 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGIL-LAG 388 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHH-HHH
Confidence 9988888889989999999999999888877763 443
No 226
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.52 E-value=2.9e-07 Score=91.80 Aligned_cols=176 Identities=17% Similarity=0.224 Sum_probs=100.3
Q ss_pred hcchhHHHHHHHHHhhhchhhhhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHH
Q 009130 326 MCTGNFWFLCIATLCGMGSGIATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMV 404 (543)
Q Consensus 326 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~ 404 (543)
.||+.+|.+...+++..+..-....+.+.++++ .|+|.++.|.+++...+...+.+++.|.++||++.|+ ..+..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK----~Ll~~ 79 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK----HLLWF 79 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS----HHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH----HHHHH
Confidence 367788888887777766655667777888876 7999999999999999999999999999999998652 12223
Q ss_pred HHHHHHHHHH-HHHhh-cC-cchHHHHHHH----HHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhh
Q 009130 405 ITLVAMSIGH-IAIAS-GF-PGNLFVGTMI----VGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVR 477 (543)
Q Consensus 405 ~~~~~~~i~~-~~~~~-~~-~~~~~~~~~l----~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~ 477 (543)
+..+....+. ..... +- ....++..++ +++++.+..+..=+++.+. . ++.+--+|=.-+-+.+|-. ++..
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s-r~~~feYG~~R~wGSig~a-i~s~ 156 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S-RRNGFEYGRARMWGSIGFA-IASL 156 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H-HHHSS-HHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH-H-HHhcCCcchHHHHhhHHHH-HHHH
Confidence 2332222222 21111 10 0112222333 3333444334333333322 1 2334455555555556553 5556
Q ss_pred hhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 478 IIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 478 l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
+.|.+.+.. .+..||+..+..++..++.+..
T Consensus 157 ~~G~L~~i~-------------p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 157 LAGILFNIN-------------PNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHSS
T ss_pred HhheeeeeC-------------ccHHHHHHHHHHHHHHHHHHHc
Confidence 788888754 4467776655444444443333
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.50 E-value=3.1e-06 Score=82.34 Aligned_cols=166 Identities=13% Similarity=0.034 Sum_probs=127.7
Q ss_pred hchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCcchH
Q 009130 350 NNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----SGFPGNL 425 (543)
Q Consensus 350 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----~~~~~~~ 425 (543)
..+|.+.+..+.+..++++....+..+..+..+..|++.+|+++| ..+..++.++++++.++. ..+...+
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk------~gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK------AGIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH------HHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 335667677899999999999999999999999999999999765 678889999999998875 2344556
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhc---cCCCCc----cccccc
Q 009130 426 FVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRV---ASGEDH----TCYGTH 498 (543)
Q Consensus 426 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~---g~~~~~----~~~~~~ 498 (543)
.++.++.+.|.+..-+..+.++..+.+++......++....+.+|. +++|++++.+.+.. +-.++. +.....
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa-~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~ 186 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGA-ILGPLLGSSLILSGVALTMSAAQILAIKGADAS 186 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHH-HHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHH
Confidence 7778888999999888899999999999888889999999999998 48999998887731 000000 011123
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 499 CFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 499 ~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
.++.+|..++...++..+.....+
T Consensus 187 ~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 187 SVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcc
Confidence 477788888777666666544443
No 228
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.47 E-value=2.5e-06 Score=89.21 Aligned_cols=170 Identities=9% Similarity=0.097 Sum_probs=104.9
Q ss_pred hhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC--c
Q 009130 347 ATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGF--P 422 (543)
Q Consensus 347 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~--~ 422 (543)
.+..+++.|+++ .|+++..++.++.+..+..++..++.|+++||...|.+ +|++.+..+.+..++++.++. .++ .
T Consensus 24 ~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~G-rrrp~il~g~i~~~i~~~llf~~p~~~~ 102 (473)
T PRK10429 24 IVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWG-KFKPWILIGTLANSVVLFLLFSAHLFEG 102 (473)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCC-CcchhHhhhhHHHHHHHHHHHcCCCCCc
Confidence 344556666665 59999999999999999999999999999997643322 235667777777666654443 221 1
Q ss_pred c----hHHHHHHHHHhhhhhhhhhHHHHHHhhc-CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccccc
Q 009130 423 G----NLFVGTMIVGVCYGSQWSLMPTITSEIF-GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGT 497 (543)
Q Consensus 423 ~----~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~ 497 (543)
. .+.+..++.++++........++.+|+. ++++|.+..+.......+|+.+. +.+...+.+..|..+ ..
T Consensus 103 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~-~~~~~~~~~~~g~~~-----~~ 176 (473)
T PRK10429 103 TAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT-AGFTLPFVNYVGGGD-----RG 176 (473)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCc-----hh
Confidence 1 1223334556677766677778889988 57889988888666556655322 222222223222100 01
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 498 HCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 498 ~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
.+|+....+.+++.+++.+++++..+
T Consensus 177 ~g~~~~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 177 FGFQMFTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCce
Confidence 13666666666665555555444333
No 229
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.46 E-value=1.1e-06 Score=86.05 Aligned_cols=150 Identities=7% Similarity=-0.044 Sum_probs=115.9
Q ss_pred hHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCC
Q 009130 12 KWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRG 90 (543)
Q Consensus 12 ~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g 90 (543)
+-.+.++...+....|.....+.-...-.+++|++..++.++.....+.+. ++++.|+|.||+|
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg--------------- 316 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFG--------------- 316 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 333344444444445554434333345566999999999977777776665 7889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhh
Q 009130 91 PWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGL 169 (543)
Q Consensus 91 ~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~l 169 (543)
.|+++.++.++..+..+. .-+... -..+.++.++.|...|.....+-++.++..| +|-+..+|++....-.
T Consensus 317 ~k~vl~~~lvi~~~~~~~-----~~~~~~---~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra 388 (438)
T COG2270 317 SKPVLMIGLVILSIAALY-----LIFLEG---ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA 388 (438)
T ss_pred CceeehHHHHHHHHHHHH-----HHHccc---cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH
Confidence 999999999988877777 333343 3667888999999999999999999999999 5779999999999999
Q ss_pred hHHHHHHHHHHhcCC
Q 009130 170 SGAVLTQVYKTVCNG 184 (543)
Q Consensus 170 g~~i~~~l~~~l~~~ 184 (543)
++.++|.+.+.+.+.
T Consensus 389 ~S~~gp~lv~v~t~i 403 (438)
T COG2270 389 ASFLGPFLVAVITQI 403 (438)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888877643
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.45 E-value=8.5e-07 Score=91.46 Aligned_cols=169 Identities=15% Similarity=0.174 Sum_probs=117.9
Q ss_pred hhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCc-----
Q 009130 349 MNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFP----- 422 (543)
Q Consensus 349 ~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~----- 422 (543)
..+++.++++ .|+++...+.+..+..+.+++..++.|.++||...|.+ +|++.+..+.+..++++.++....|
T Consensus 21 ~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~G-rrrp~~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 21 SSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWG-RRRPWILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccc-ccceEeehhhHHHHHHHHHhhccccchhhh
Confidence 3355555555 59999999999999999999999999999996543332 3456677787777777766553211
Q ss_pred ----chHHHHHHHHHhhhhhhhhhHHHHHHhhcCC-cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccccc
Q 009130 423 ----GNLFVGTMIVGVCYGSQWSLMPTITSEIFGV-RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGT 497 (543)
Q Consensus 423 ----~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~ 497 (543)
.+..+..+++.+++........++.+|+.++ ++|.+..+.-.....+|.. +...+.+.+.+..+..+. .
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~-l~~~~~~~l~~~~g~~~~-----~ 173 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL-LASFLAPILVSWFGGGDT-----S 173 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH-HHHHHhhhhhhhhccCcc-----c
Confidence 1134445555777777777777889999874 6889888888777777773 344456666655553111 0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 498 HCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 498 ~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.+|+...++.+++.+++.++..+..+|
T Consensus 174 ~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 174 NGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 258888888888888887777776666
No 231
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.43 E-value=2e-06 Score=84.76 Aligned_cols=105 Identities=20% Similarity=0.216 Sum_probs=85.5
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh----cCc----chHHHHHHHH
Q 009130 361 YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS----GFP----GNLFVGTMIV 432 (543)
Q Consensus 361 ~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~----~~~----~~~~~~~~l~ 432 (543)
+++...+.......++.++|++++|++.||+||| .++...+++++++.++... +++ .++....+++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK------~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~L 154 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK------KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLL 154 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch------hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHh
Confidence 6666777888899999999999999999999655 6888888888888775541 222 2466678899
Q ss_pred HhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 433 GVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 433 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
|+|.|+=+|+..++++|....+.||+-.+.+...+..|.
T Consensus 155 GiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 155 GIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999999999999998888766666654
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.43 E-value=2e-06 Score=87.02 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=78.7
Q ss_pred HhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh
Q 009130 339 LCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA 418 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~ 418 (543)
++.....-.+..+++.++++.|+|.+|.+.+.++..+..+++.+++|.++||..++ ++.+.+..++..+.+....
T Consensus 12 f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~-----~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA-----KRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH-----HHHHHHHHHHHHHHHHHHH
Confidence 33333333456678899999999999999999999999999999999999998643 3455555555555444333
Q ss_pred -hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcC
Q 009130 419 -SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFG 452 (543)
Q Consensus 419 -~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~ 452 (543)
..+.+.+.+..++..+.+.+..+...++..+...
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 3455556666667777777777777777777665
No 233
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.41 E-value=3e-06 Score=85.72 Aligned_cols=188 Identities=11% Similarity=0.060 Sum_probs=120.0
Q ss_pred HHHHHHHHHhhhchhhhhhhchHHHHHh--hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 009130 331 FWFLCIATLCGMGSGIATMNNIAQVGES--LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLV 408 (543)
Q Consensus 331 f~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~ 408 (543)
.|...+..++.......+....-+|.++ .+-+.+.-|+..+...++.+++.+++|+.+.|.++- ++.++.+.+
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-----k~Pli~s~i 110 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-----KKPLIVSFL 110 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-----ccCHHHHHH
Confidence 4455555554433333333333345555 677888999999999999999999999999998631 345667888
Q ss_pred HHHHHHHHHh----hc--CcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhh
Q 009130 409 AMSIGHIAIA----SG--FPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRI 482 (543)
Q Consensus 409 ~~~i~~~~~~----~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l 482 (543)
+++++.++.. .+ ..+.+.++.++.|+|.|. .+..-.++++.--.++|.++.+....+..+|. ++||.+...
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~-ilGp~~q~~- 187 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGI-ILGPTIQLA- 187 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHH-HHhHHHHHH-
Confidence 8888877662 12 234567788899998765 45666788887767888888877766555554 355533222
Q ss_pred hhhccCCCCccc--cccchhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 009130 483 YDRVASGEDHTC--YGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 483 ~~~~g~~~~~~~--~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
+.-.+.++-... .--+-|..+-|++++++++.+++..+..+|..
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 221121110000 11124778888999988888888777665543
No 234
>PRK11462 putative transporter; Provisional
Probab=98.40 E-value=7e-06 Score=85.33 Aligned_cols=168 Identities=8% Similarity=0.016 Sum_probs=108.3
Q ss_pred hhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC--cc-
Q 009130 349 MNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGF--PG- 423 (543)
Q Consensus 349 ~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~--~~- 423 (543)
..++..++++ .|+++..++.++.+.-+.+++.-++.|.++||...|.+ +|++.+.++.+...++++++. .+. ..
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~G-r~rp~il~g~i~~~i~~~llf~~p~~s~~~ 107 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWG-KFRPWVLFGALPFGIVCVLAYSTPDLSMNG 107 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCC-CcchhHhHHHHHHHHHHHHHHhCCCCCcch
Confidence 3455555555 69999999999999999999999999999999765543 345666667666666655443 221 11
Q ss_pred ---hHHHHHHHHHhhhhhhhhhHHHHHHhhcC-CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccch
Q 009130 424 ---NLFVGTMIVGVCYGSQWSLMPTITSEIFG-VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHC 499 (543)
Q Consensus 424 ---~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~ 499 (543)
.+.+..++..+++........++.+|+.+ +++|.+..+.-..+..+|.. +++.+...+.+..|+.+ ...+
T Consensus 108 ~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~-~~~~~~~plv~~~g~~~-----~~~g 181 (460)
T PRK11462 108 KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM-LSTVLMMPLVNLIGGDN-----KPLG 181 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----hhhh
Confidence 13333445567777777777788888876 57899999988877777763 44444433444433111 0124
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 500 FMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
|.....+.+++.+++..+++...+
T Consensus 182 ~~~~~~i~~ii~~i~~~i~~~~~k 205 (460)
T PRK11462 182 FQGGIAVLSVVAFMMLAFCFFTTK 205 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcce
Confidence 776666666655555544444333
No 235
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.33 E-value=4.2e-06 Score=82.09 Aligned_cols=122 Identities=10% Similarity=0.077 Sum_probs=92.1
Q ss_pred hcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 009130 42 TQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRP 120 (543)
Q Consensus 42 ~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 120 (543)
++|+++.+.+...+.+..+.. ..+..+++.||+| +|+++.++.++..++.++ ....++
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g---------------~~~~l~~~~~l~~~~~~l-----~~~~~~- 230 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMIS---------------QGRYLAFNAFLAVLLSIG-----AALTHG- 230 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------HHHHHHHHHHHHHHHHHH-----HHHcCC-
Confidence 379999999966666666655 6778999999998 999998888888777755 222333
Q ss_pred ChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchh
Q 009130 121 VPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPST 188 (543)
Q Consensus 121 ~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~ 188 (543)
.... ..-++.|++.+..+|...+...+.+|++.+.+.++. ....+|+++.|++.+.+.+..+-+
T Consensus 231 --~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~ 294 (310)
T TIGR01272 231 --YVAM-WFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQ 294 (310)
T ss_pred --HHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccch
Confidence 2222 244478899999999999999999998777788876 456689999999999887654433
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.32 E-value=1.4e-05 Score=76.68 Aligned_cols=153 Identities=15% Similarity=0.130 Sum_probs=120.5
Q ss_pred hchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Q 009130 350 NNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGT 429 (543)
Q Consensus 350 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 429 (543)
..++.+-++.|.|.+.++.+.++..++..+..++..++..|++.+ ..+..++++.+++..+=...+...++...
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e------r~l~~~Llli~~G~~iR~~~~~~~L~~gt 106 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE------RSLFLALLLIAAGILIRSLGGLPLLFLGT 106 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH------HHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 345556677899999999999999999999999999999999653 56777777777777654444566788889
Q ss_pred HHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHH
Q 009130 430 MIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAF 509 (543)
Q Consensus 430 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~ 509 (543)
.+.|.+.+......|..+.+.|| |+.+...|++.+...+++. +++.+.-.+.+..+ +|+.+...-+.
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aa-Laa~lavpla~~~~-----------gW~~aL~~WAl 173 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAA-LAAALAVPLAQHSG-----------GWRGALGFWAL 173 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHH-HHhhhhhHHHHhhc-----------cHHHHHHHHHH
Confidence 99999999999999999999998 7888888998877777764 55545555555543 39999888888
Q ss_pred HHHHHHHHHHHH
Q 009130 510 VAFFGSLVAFLL 521 (543)
Q Consensus 510 ~~~~~~i~~~~~ 521 (543)
..++++++.+.-
T Consensus 174 ~allAl~~WlPq 185 (395)
T COG2807 174 LALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHhhh
Confidence 888877765544
No 237
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.28 E-value=1.3e-05 Score=74.04 Aligned_cols=151 Identities=7% Similarity=-0.042 Sum_probs=105.8
Q ss_pred chhhHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhhHH-HHHHHhhhcccccchhhHhhhhcccccccccccccc
Q 009130 9 TNSKWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQSTLE-RVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRF 87 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~ 87 (543)
++.-|++.+.|....+++-..+..+ ....+|+||+|+...+ ..+....+....+++.|.+.||+|
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G------------ 328 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYG------------ 328 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhc------------
Confidence 3445777777766555543333332 2457899999999999 667777777788999999999998
Q ss_pred cCCchHHHHHHHHHHHHH-HHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHH
Q 009130 88 LRGPWVVHFTGAILCFTG-YFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKG 165 (543)
Q Consensus 88 ~~g~r~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~ 165 (543)
++...+.+..+.++. -..+ .+. ++.=.+...+.|+...+....-...++...| ++.|++.|...+
T Consensus 329 ---~n~~wv~~a~~~tl~~H~~l-----~Ft-----~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qs 395 (459)
T KOG4686|consen 329 ---FNLWWVASACILTLLGHSGL-----FFT-----FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQS 395 (459)
T ss_pred ---ceehhHHHHHHHHHHHhhhH-----Hhh-----hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHH
Confidence 777766665554443 3331 111 1222345566777766654445566777889 579999999999
Q ss_pred hhhhhHHHHHHHHHHhcCCCc
Q 009130 166 FVGLSGAVLTQVYKTVCNGNP 186 (543)
Q Consensus 166 ~~~lg~~i~~~l~~~l~~~~~ 186 (543)
..++|-++.|.+++.+.+.+.
T Consensus 396 IqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 396 IQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHhhhhhHHhhhhheeecCCC
Confidence 999999999999999987654
No 238
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.26 E-value=3.8e-05 Score=74.37 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=111.0
Q ss_pred HHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHh
Q 009130 355 VGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGV 434 (543)
Q Consensus 355 ~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~ 434 (543)
.++++|++..+.+.++......+.+...+.|.++||+||| +.++...++..++++.-..++...+++..++-|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk------~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK------KACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch------HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999765 5666677777777776667777888999999999
Q ss_pred hhhhhhhhHHHH-HHhh----cCCcchhhHHHHHH-hhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 435 CYGSQWSLMPTI-TSEI----FGVRHMGTIFNTIS-IACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 435 ~~g~~~~~~~~~-~~~~----~~~~~~g~~~g~~~-~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
+....++.+-++ +.|+ +|++..+..++... ..+.+-. +.+..+...+.|..+. +...+|....
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vA-I~aGv~a~~l~~~~~~----------g~vaPF~~a~ 202 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVA-IGAGVVANVLADWFGF----------GPVAPFDAAI 202 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHH-HHHhHHHHHHHHHhCC----------CCcchHHHHH
Confidence 999988888764 5554 33333445555444 3344443 3444455566666552 1357888888
Q ss_pred HHHHHHHHHHHHHhhcch
Q 009130 509 FVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 509 ~~~~~~~i~~~~~~~~~~ 526 (543)
.+..++.++....+.|+.
T Consensus 203 ~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 203 VLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHHHhcccccC
Confidence 888888777666666543
No 239
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.23 E-value=0.00028 Score=75.79 Aligned_cols=157 Identities=10% Similarity=0.040 Sum_probs=114.1
Q ss_pred cccHHHHhhcCCChhhHH-HHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHH
Q 009130 34 IYSSTLKSTQNYDQSTLE-RVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWAS 112 (543)
Q Consensus 34 ~~~~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~ 112 (543)
++..++.+.+|+++++.. ....+..+.+...+++|.++|++ +|+++++.++.++..+|..++++.
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~--------------lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW--------------LGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hhhHHHHHHHHHHHHHHHHHHHhc
Confidence 455677888999999888 66666667777899999999996 589999999999999999885432
Q ss_pred HhccCCC--CChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CC---CcchhHHHHHhhhhhHHHHHHHHHHhcCC--
Q 009130 113 VVGLLPR--PVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HY---SGTIVGILKGFVGLSGAVLTQVYKTVCNG-- 184 (543)
Q Consensus 113 ~~~~~~~--~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~---rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-- 184 (543)
+.... .......+++-.+..+|.|..-+...+...|-|+ ++ |-....+...+.++|+.+++++..++-+.
T Consensus 75 --a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~ 152 (654)
T TIGR00926 75 --AIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG 152 (654)
T ss_pred --cCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11110 0012234556667778999998988899999995 32 56678888888899999998888877522
Q ss_pred -----CchhHHHHHHHHHHHHHHHHHh
Q 009130 185 -----NPSTYILVLALLPTLVSLLFMS 206 (543)
Q Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~ 206 (543)
..|...+.+..+..+++++...
T Consensus 153 ~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 153 CFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred ccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 2466666666666666655443
No 240
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.23 E-value=3.7e-06 Score=84.48 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=123.6
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhh-hhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH
Q 009130 324 QAMCTGNFWFLCIATLCGMGSGIAT-MNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 324 ~~~~~~~f~~~~l~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
+++.++....+++...+. +...++ .+++=-.++|.+-.+.--|......-.+.+..=++.+++..|+|| ..+
T Consensus 366 ~~~~s~~~llff~~av~m-G~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGH------v~v 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVM-GAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGH------VNV 438 (618)
T ss_pred HHhcCCCEEehhHHHHHH-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcc------cce
Confidence 456666544433332222 222222 222222346666555544544445555555666667777788754 467
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHH-hhhhhhhhhhhhhhhh
Q 009130 403 MVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIS-IACPVGSYICSVRIIG 480 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~ig~~i~~~~l~g 480 (543)
+..++.+..+=++.+. ..++|.....-++-|+..+..+....++++...||+.+.++.|+.. ..-++|- -+|.+++|
T Consensus 439 ~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~-g~GslIGG 517 (618)
T KOG3762|consen 439 MYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGK-GLGSLIGG 517 (618)
T ss_pred eeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCc-chhhhhhh
Confidence 7777777777666666 6788888888899999999999999999999999999999999984 4455665 36777889
Q ss_pred hhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 481 RIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 481 ~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.+.++.+ -+..|..+++.+++.+++.+.+.+.
T Consensus 518 ~~v~~fg------------~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 518 FVVERFG------------ARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hhheeeh------------hHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999887 6788888888888877776665543
No 241
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.20 E-value=1.8e-05 Score=82.31 Aligned_cols=160 Identities=16% Similarity=0.119 Sum_probs=103.3
Q ss_pred hhhhhchHHHHH-hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHH-HHHHHHHhh-cCc
Q 009130 346 IATMNNIAQVGE-SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAM-SIGHIAIAS-GFP 422 (543)
Q Consensus 346 ~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~-~i~~~~~~~-~~~ 422 (543)
......++++++ ++|+|+++.+.+.++..+.-.+-.+ +|.++||++.. +..|++.+.++.++. .+.+..+.. ++.
T Consensus 42 ~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~-G~rRr~~l~~~~~l~~~~~~~~l~~~~~~ 119 (468)
T TIGR00788 42 GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLF-GYTKRWYLVLSGLLGSAILYGLLPGKVSS 119 (468)
T ss_pred HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCC-CccchHHHHHHHHHHHHHHHHhcccccch
Confidence 334445555665 5799999999999999988877544 99999999521 113456666665555 233333332 222
Q ss_pred ch-HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhh---HHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccc
Q 009130 423 GN-LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGT---IFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTH 498 (543)
Q Consensus 423 ~~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~---~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~ 498 (543)
.. ..+..++.+++.+..-...-++..|..+ |++.. ..+.......+|. ++++.+.|.+.+..+
T Consensus 120 ~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~-~vg~~l~G~l~~~~~----------- 186 (468)
T TIGR00788 120 AKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGG-LISSLLGGPLLDKTL----------- 186 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHH-HHHHHHHHHHHHhcC-----------
Confidence 22 2335566777777777777788899888 44433 3333333334666 577788999988876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 009130 499 CFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 499 ~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
|+..|++.+.+.++..+...++
T Consensus 187 -~~~~f~~~a~l~ll~~~~~~~~ 208 (468)
T TIGR00788 187 -TRILFLITAALLLLQLFVSNLS 208 (468)
T ss_pred -cchHHHHHHHHHHHHHHHHHhc
Confidence 8999999888777774443333
No 242
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.19 E-value=1.4e-05 Score=81.46 Aligned_cols=137 Identities=16% Similarity=0.228 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCcchHHHHHHHHHhhhhhhhhh
Q 009130 367 NSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----SGFPGNLFVGTMIVGVCYGSQWSL 442 (543)
Q Consensus 367 ~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l~G~~~g~~~~~ 442 (543)
+..++.+.+++++|.++.|+++||+||| ..+.+..++..++.++.. .++...+.+..++.|+..|.....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK------~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRK------NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcch------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHH
Confidence 4466789999999999999999999765 556666555554444332 345567888999999999999999
Q ss_pred HHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHH
Q 009130 443 MPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 443 ~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 520 (543)
.+.++.|..|.+.||....+..++..+|. +++..++ +-...|+. ..|...+.+..+..++..+...+
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~-ll~~~~~--l~~ilGt~--------~~W~~l~~~~~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGI-LLGQVLG--LPSLLGTE--------DLWPYLLAFPLIPALLQLALLPF 203 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHH-HHHHHHc--cHHhcCCC--------cchHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999888888887776 4553222 11222321 13777766666666666555433
No 243
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.17 E-value=3.1e-05 Score=72.30 Aligned_cols=128 Identities=20% Similarity=0.149 Sum_probs=88.1
Q ss_pred hhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--
Q 009130 341 GMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-- 418 (543)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-- 418 (543)
..+..+.+..+-|++-+.+|+|++|...+.....++..+| ++.|.+.|+++. +.++.++.+...+++..+.
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp------~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGP------WVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcch------HHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777778888889999999999999999998876 788999999954 4678888888888876543
Q ss_pred h-c----Ccc-hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 419 S-G----FPG-NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 419 ~-~----~~~-~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
. . .+. .+.+..++.|.+.....+..-....+.|| ++||++.|+.-...++++.++..
T Consensus 87 ~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~ 149 (250)
T PF06813_consen 87 VSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ 149 (250)
T ss_pred HhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH
Confidence 1 1 111 22223333333333332333334457787 68999999998777777765554
No 244
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.16 E-value=5.6e-05 Score=76.48 Aligned_cols=171 Identities=9% Similarity=0.071 Sum_probs=116.2
Q ss_pred hhhhchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH-hhcC---
Q 009130 347 ATMNNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAI-ASGF--- 421 (543)
Q Consensus 347 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~-~~~~--- 421 (543)
....++..+++| .|+++..++.++.+.=+..++.-++.|.++||..+|.+ .|++.++.+.+..++.+.+. ..++
T Consensus 30 ~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~G-rfRP~lL~g~ip~~i~~~l~F~~p~~~~ 108 (467)
T COG2211 30 IVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWG-RFRPWLLWGAIPFAIVAVLLFITPDFSM 108 (467)
T ss_pred HHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccc-cccHHHHHHhHHHHHHHHHHHcCCCccc
Confidence 345566667766 59999999999999999999999999999999875544 34566666666555554443 3332
Q ss_pred ---cchHHHHHHHHHhhhhhhhhhHHHHHHhhcC-CcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcccccc
Q 009130 422 ---PGNLFVGTMIVGVCYGSQWSLMPTITSEIFG-VRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGT 497 (543)
Q Consensus 422 ---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~ 497 (543)
....++.-++.++++........++.+++.+ +++|.+..+.-.....+|.. +...+.+.+....++.+. .
T Consensus 109 ~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~-l~~~~~~plv~~~g~~~~-----~ 182 (467)
T COG2211 109 TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGL-LVAVLFPPLVKLFGGGDK-----A 182 (467)
T ss_pred CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCcc-----h
Confidence 1224455667788888887777788888764 47788888888777777764 333445555555443210 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 498 HCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 498 ~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
.+|+....+.+++..+..+++++-.+|
T Consensus 183 ~g~~~~~~~~~vi~~i~~l~~~~~v~E 209 (467)
T COG2211 183 LGYQGTALVLGVIGVILLLFCFFNVKE 209 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 257777777776666666666665444
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.15 E-value=3.7e-05 Score=75.61 Aligned_cols=131 Identities=16% Similarity=0.133 Sum_probs=95.6
Q ss_pred HHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-----hcC-------c
Q 009130 355 VGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-----SGF-------P 422 (543)
Q Consensus 355 ~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-----~~~-------~ 422 (543)
+..|++.+..-.+.+.++..+... .|+.+|..||+.+.-.+++|.+.+..+.+.+..+..+.. ... +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 345788888888888888887764 799999999997623344566777777777666544322 111 1
Q ss_pred ch-----HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 423 GN-----LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 423 ~~-----~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.+ ..++..++|+|.+..-+...+++.|..++|+|+++.+++.+...+|- +++..+.|.+.|...
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~-iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGI-IVSAIVFGRLLDPFS 153 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHH-HHHHHHHHHHccccC
Confidence 11 23345577888888888888999999999999999999977766665 577778888877653
No 246
>PRK09848 glucuronide transporter; Provisional
Probab=98.12 E-value=4e-05 Score=79.57 Aligned_cols=116 Identities=12% Similarity=0.118 Sum_probs=72.9
Q ss_pred hchHHHHHh-hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH-HHHHHhhc---Ccc-
Q 009130 350 NNIAQVGES-LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSI-GHIAIASG---FPG- 423 (543)
Q Consensus 350 ~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~~---~~~- 423 (543)
.+++.|+++ .|+++.+++.+.++..+..++..++.|+++||.++|.+ .|++.+..+.+...+ +.+++..+ +..
T Consensus 29 ~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~G-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (448)
T PRK09848 29 LFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWG-KFRPFLLFGTAPLMIFSVLVFWVPTDWSHSS 107 (448)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCc-CchHHHHHHHHHHHHHHHHHHhCcCCCCcch
Confidence 344456655 59999999999999999999999999999999976643 334444545443333 33333221 111
Q ss_pred -h--HHHHHHHHHhhhhhhhhhHHHHHHhhcCC-cchhhHHHHHHhh
Q 009130 424 -N--LFVGTMIVGVCYGSQWSLMPTITSEIFGV-RHMGTIFNTISIA 466 (543)
Q Consensus 424 -~--~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 466 (543)
. .++..++.+++++...+...++..++..+ ++|.+..+.-..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~ 154 (448)
T PRK09848 108 KVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIA 154 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHH
Confidence 1 23334556777777666666666666544 5677665554433
No 247
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.11 E-value=8.9e-08 Score=99.51 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=105.2
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc---CcchHHHHHHHHHhhhhhh
Q 009130 364 TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SG---FPGNLFVGTMIVGVCYGSQ 439 (543)
Q Consensus 364 ~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~---~~~~~~~~~~l~G~~~g~~ 439 (543)
.+.++..+...++..+|.+++|+++||+||| +.+..+.++..++.++.. .+ +...+.+..++.|++.|..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRK------PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 3467888999999999999999999999665 677778888888777665 34 5677888899999999999
Q ss_pred hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHH
Q 009130 440 WSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 518 (543)
.+..+.++.|..|+++|+...++......+|.. ++..+ +....... +...||..+.+..+..++..+..
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~-~~~~~-~~~~~~~~--------~~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGIL-LASLI-GYIVSYYS--------DNWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccccccccccccccc-ccccc-cccccccc--------ccccccccccccccccccccccc
Confidence 999999999999999999999999888877763 54432 22222111 01238888777776665544443
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.00 E-value=0.00013 Score=72.31 Aligned_cols=128 Identities=12% Similarity=-0.017 Sum_probs=85.9
Q ss_pred HHHHhhcCCChhhHH-HHHHHhhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhc
Q 009130 37 STLKSTQNYDQSTLE-RVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVG 115 (543)
Q Consensus 37 ~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~ 115 (543)
++...+.|++..-.+ .....-..+...+++.|..+||. ++++|| ||+-+..+..+.+++.++ .+
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc----~sr~GR------RRPfI~~~s~~i~~~l~L-----ig 120 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRC----TSRYGR------RRPFILAGSLLIAVSLFL-----IG 120 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceeccccccccccc----cccccc------ccchHHHhhHHHHHHHhh-----hh
Confidence 444557888888777 33344445556899999999996 466677 777778888888888887 44
Q ss_pred cCCCC--------C------hHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcc-hhHHHHHhhhhhHHHHHHHHH
Q 009130 116 LLPRP--------V------PVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGT-IVGILKGFVGLSGAVLTQVYK 179 (543)
Q Consensus 116 ~~~~~--------~------~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~-~~gi~~~~~~lg~~i~~~l~~ 179 (543)
++.+. . ....+++.--+.=+....+..++-+.++|... +++-+ +.+......++|+.++-.+++
T Consensus 121 ~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 121 YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 43331 0 11122223333445666778888899999994 44444 899998899999888865554
No 249
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.98 E-value=9.8e-05 Score=79.17 Aligned_cols=164 Identities=16% Similarity=0.244 Sum_probs=118.5
Q ss_pred hhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcC-c--
Q 009130 347 ATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGF-P-- 422 (543)
Q Consensus 347 ~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~-~-- 422 (543)
++...+..++ ..+|++.+++..++..+....-+..+++|+++|++- +|.+.+.++.++..++..+++... +
T Consensus 5 Gm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~l-----G~~~tIl~~~ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 5 GMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWL-----GKFKTILYLSIVYVVGHALLSFGAIPSS 79 (654)
T ss_pred ecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 3344444444 447999999988888888888889999999999763 555788888888888887665321 1
Q ss_pred ------chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc---hhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCcc
Q 009130 423 ------GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH---MGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHT 493 (543)
Q Consensus 423 ------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~ 493 (543)
...++...+..+|.|+.-+...+...|.+++++ +-..+.+...+.++|+. +++++.+++.+..+
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSl-is~~i~~~l~~~~~------ 152 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSL-ISTIITPILRGDVG------ 152 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhc------
Confidence 124556777788899988999999999998654 55677777788888884 77777887765432
Q ss_pred ccc-cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 494 CYG-THCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 494 ~~~-~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
|++ ..+|..+|.+.+++++++.++.....
T Consensus 153 ~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 153 CFGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred ccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 22588999999988888877755433
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00013 Score=66.90 Aligned_cols=98 Identities=11% Similarity=0.027 Sum_probs=62.1
Q ss_pred HHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 009130 38 TLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGL 116 (543)
Q Consensus 38 ~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~ 116 (543)
++-+.++.-..|++.+..+..-.. .++.+.|-++||-| ||+. ++.+.+-+.+-|+ +-.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqG---------------RKra----cvtycitYiLsCi--TKh 120 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQG---------------RKRA----CVTYCITYILSCI--TKH 120 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhc---------------cccc----eeeehHHHHHHHH--hhc
Confidence 444577888888884444433333 37888999999988 8874 3445555555333 233
Q ss_pred CCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcch
Q 009130 117 LPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTI 159 (543)
Q Consensus 117 ~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~ 159 (543)
.+. +..++++|++.|++.+..+..--+....-..+||+.-
T Consensus 121 Spq---YkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 121 SPQ---YKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred CCc---eEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 444 7788999999999999887765443322222355543
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.85 E-value=0.027 Score=57.96 Aligned_cols=131 Identities=8% Similarity=-0.119 Sum_probs=86.1
Q ss_pred HHHHhhcCCCh-----hhHHHHHHHhhhccc--ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHH
Q 009130 37 STLKSTQNYDQ-----STLERVAVFKDMGGS--AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLV 109 (543)
Q Consensus 37 ~~l~~~~~~s~-----~~~~~~~~~~~~~~~--~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~ 109 (543)
-.++|.+.++. ..+.++-+...+... +.++.+++.+|++ |++.+-.-...+.+-.+++
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~---------------~~~lf~~~~~~F~~~f~lF 91 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILS---------------KEALFYTVISPFLGFFALF 91 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------HHHhHHHHHHHHHHHHHHH
Confidence 56777776643 345566555555443 3678899999998 8888877777777777776
Q ss_pred HHHHhccCCCC--C---------------------hHHHHHHHHHHHhcCcchhhh-hHHHHHhhhcC-CCCcchhHHHH
Q 009130 110 WASVVGLLPRP--V---------------------PVPLMCLFIFTAAHAQNFFNT-GNIVTGVMNFG-HYSGTIVGILK 164 (543)
Q Consensus 110 ~~~~~~~~~~~--~---------------------~~~~~~~~r~l~G~g~g~~~~-~~~~~~~~~fp-~~rg~~~gi~~ 164 (543)
+...-...... + ..|...++.+...+-...... .-...++|.+. +|-.+-.++..
T Consensus 92 ~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~ 171 (472)
T TIGR00769 92 AFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFG 171 (472)
T ss_pred HHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 55422211110 0 023444455555554444443 56678899997 56667889999
Q ss_pred HhhhhhHHHHHHHHHHhc
Q 009130 165 GFVGLSGAVLTQVYKTVC 182 (543)
Q Consensus 165 ~~~~lg~~i~~~l~~~l~ 182 (543)
.+.++|..+++.+..++.
T Consensus 172 ~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 172 LGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998887764
No 252
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.68 E-value=0.0028 Score=64.88 Aligned_cols=102 Identities=12% Similarity=0.028 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH--HHHHHHHHHHh-h---------cCcchHHHHHHHH
Q 009130 365 EINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL--VAMSIGHIAIA-S---------GFPGNLFVGTMIV 432 (543)
Q Consensus 365 ~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~--~~~~i~~~~~~-~---------~~~~~~~~~~~l~ 432 (543)
..-..+..++++..+||.+..+. ..-.+| .| .+...+. ++.+..+++.. . .+.+..++..+++
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~---~~-~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~ 382 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDED---SR-WLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLF 382 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCC---cc-chHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHH
Confidence 34556779999999999966543 111111 22 2222221 11222222221 1 1233456678888
Q ss_pred HhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 433 GVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 433 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
|+..|...+....+.++..+++++-.+-.++...-.+|-
T Consensus 383 gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl 421 (437)
T TIGR00939 383 GFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGL 421 (437)
T ss_pred HHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999888888777888888888777666666655554443
No 253
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.66 E-value=0.0005 Score=70.72 Aligned_cols=157 Identities=19% Similarity=0.162 Sum_probs=105.8
Q ss_pred HHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc----CcchHHH
Q 009130 353 AQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SG----FPGNLFV 427 (543)
Q Consensus 353 ~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~----~~~~~~~ 427 (543)
+.+.+++|.++++.+.+.++..+-- .-+++.|.++|.+--+ +.+|++.+.++.++..++...++ .+ +.....+
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~-G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIF-GYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhccccccc-CCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 3444668999999888777776554 4678899999987421 11456777777777655544443 11 2233444
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhcCC--cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 009130 428 GTMIVGVCYGSQWSLMPTITSEIFGV--RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFM 505 (543)
Q Consensus 428 ~~~l~G~~~g~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~ 505 (543)
..++..+|....-...-+++.|.... +.+|...+.......+|+ +++..+.|.+.+..+ ++..|.
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~-lv~~~l~G~l~~~~~------------~~~~f~ 158 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGS-LVGSLLSGPLLDSFG------------PQGVFL 158 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHH-HHHHHhhhhhhhcCC------------CeEEeh
Confidence 45556666666666666677776632 336777888888888888 477778889888776 778888
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 009130 506 IMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~~ 524 (543)
+.+.+..+..+..+++..|
T Consensus 159 i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 159 ISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 8887777777766666654
No 254
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.65 E-value=0.00046 Score=66.76 Aligned_cols=137 Identities=17% Similarity=0.050 Sum_probs=97.7
Q ss_pred cccccHHHHhhcCCCh--hhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHH
Q 009130 32 FSIYSSTLKSTQNYDQ--STLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFL 108 (543)
Q Consensus 32 ~~~~~~~l~~~~~~s~--~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~ 108 (543)
.....+.+.++++.+. .+.++......+... ..++.|.+.||+| ||+.+..+.....++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g---------------~~~~~~~~~~~~~~~~~~ 85 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYG---------------RRKVLIIGLLLFLLGTLL 85 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccc---------------chHHHHHHHHHHHHHHHH
Confidence 3345566677776665 366666565565555 4578999999988 888888887765555444
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCC--CCcchhHHHHH-hhhhhHHHHHHHHHHhcCC-
Q 009130 109 VWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGH--YSGTIVGILKG-FVGLSGAVLTQVYKTVCNG- 184 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~--~rg~~~gi~~~-~~~lg~~i~~~l~~~l~~~- 184 (543)
..+..+ ...+.+.+.|+++|++.+...+.....+.+++|+ +|+...+.... ...+|..+++.+...+...
T Consensus 86 -----~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T COG0477 86 -----LALAPN-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGAL 159 (338)
T ss_pred -----HHhCcc-chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 1278889999999999999999999999999996 78988888888 4777777777555554322
Q ss_pred -CchhH
Q 009130 185 -NPSTY 189 (543)
Q Consensus 185 -~~~~~ 189 (543)
..|++
T Consensus 160 ~~~~~~ 165 (338)
T COG0477 160 LWGWRA 165 (338)
T ss_pred hcchHH
Confidence 34554
No 255
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.64 E-value=0.0012 Score=63.71 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=97.9
Q ss_pred hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhh
Q 009130 359 LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYG 437 (543)
Q Consensus 359 ~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g 437 (543)
.|.+..+..++......+..+|...+|.++|++||| +...++....++.-++-. .++..++++...+.|+|.|
T Consensus 108 w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr------~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 108 WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRR------KGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcc------hhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 488888889999999999999999999999999876 334444444444433333 4566778888889999999
Q ss_pred hhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHH
Q 009130 438 SQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLV 517 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 517 (543)
+ .+...++-.|..|..++.+-.=+. ....+|.. +...+.=.+..+.| |++-+........+.+.+
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v-~ea~law~vm~~~g------------wr~~l~~~~~pl~~~a~f 246 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQV-FEALLAWGVMSNFG------------WRYLLFTSSTPLMFAARF 246 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHH-HHHHHHHHHHHhhh------------HHHHHHHHHhHHHHHHHH
Confidence 8 777777778888888877644333 55666663 44444444445555 888777666555444444
Q ss_pred HHH
Q 009130 518 AFL 520 (543)
Q Consensus 518 ~~~ 520 (543)
..+
T Consensus 247 ~~w 249 (528)
T KOG0253|consen 247 LVW 249 (528)
T ss_pred Hhh
Confidence 443
No 256
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.64 E-value=0.017 Score=58.53 Aligned_cols=80 Identities=13% Similarity=0.234 Sum_probs=50.4
Q ss_pred hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCC----------------Cccc-c--ccchh
Q 009130 440 WSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGE----------------DHTC-Y--GTHCF 500 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~----------------~~~~-~--~~~~~ 500 (543)
+....+.=+++.+|..-|+.+.+.|+..++|+. ....+.=++.|+....+ ...| . |..|-
T Consensus 423 FVai~AFharISDP~IGGTYMTLLNTvSNLGGt-WP~~~vL~lVD~fT~~~C~~~~t~~~~c~~~~~k~~Ct~~~GG~C~ 501 (544)
T PF13000_consen 423 FVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT-WPRTFVLWLVDYFTVATCTVPGTNSFSCSSDAEKEQCTKAGGGTCV 501 (544)
T ss_pred HHHHHHHHhhccCcccchHHHHHHHHHHhcCCC-chHHHHHHHhhhccccccCCCCCCCceeccHHHHHHHhhCCCCeEE
Confidence 444445556777888899999999999999986 66656666777653221 1124 2 33332
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 009130 501 --MLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 501 --~~~f~~~~~~~~~~~i~~~~ 520 (543)
+-.||+..++|++..++.++
T Consensus 502 i~rDGYYi~~~lCvviGi~~~~ 523 (544)
T PF13000_consen 502 IIRDGYYITNILCVVIGIVLWF 523 (544)
T ss_pred EEeccchhhhHHHHHHHHHHHH
Confidence 44567777766666555443
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.55 E-value=0.031 Score=56.87 Aligned_cols=144 Identities=11% Similarity=0.002 Sum_probs=86.5
Q ss_pred HHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchH
Q 009130 322 LLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPI 401 (543)
Q Consensus 322 ~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~ 401 (543)
++.-++++.|..- +...+.+..-.++-.....|+...|+++...+..-+...+.++.|.++..++.+|+|.- +
T Consensus 252 w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv------r 324 (432)
T PF06963_consen 252 WRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV------R 324 (432)
T ss_pred HHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------h
Confidence 4445556655433 33332223233445555677778899999999999999999999999999999999643 3
Q ss_pred HHHHHHHHHHHHHH----HHh-hcCc-chHHHHHHHHHhhh--hhhh---hhHHHHHHhhcCCcchhhHHHHHHhhhhhh
Q 009130 402 FMVITLVAMSIGHI----AIA-SGFP-GNLFVGTMIVGVCY--GSQW---SLMPTITSEIFGVRHMGTIFNTISIACPVG 470 (543)
Q Consensus 402 ~~~~~~~~~~i~~~----~~~-~~~~-~~~~~~~~l~G~~~--g~~~---~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig 470 (543)
.-.++......++. .+. ..++ .......++.|+.. -+.+ -...-++-|..|+++||...|+-+..+.+.
T Consensus 325 ~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 325 AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 34444444333322 222 2222 12222222223211 1111 233346678889999999999998877777
Q ss_pred hh
Q 009130 471 SY 472 (543)
Q Consensus 471 ~~ 472 (543)
..
T Consensus 405 ~l 406 (432)
T PF06963_consen 405 EL 406 (432)
T ss_pred HH
Confidence 63
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.49 E-value=0.00034 Score=52.39 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=49.8
Q ss_pred HHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhh
Q 009130 336 IATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHK 394 (543)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~ 394 (543)
..+++..+..-.+..++|.+.++.|+|+.+.+.+.++..+...++.+++|.++||++++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 33444445555677888999999999999999999999999999999999999999754
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.30 E-value=0.0065 Score=60.52 Aligned_cols=112 Identities=16% Similarity=0.073 Sum_probs=72.5
Q ss_pred hCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hcC--cchHH-----HHH
Q 009130 359 LHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA--SGF--PGNLF-----VGT 429 (543)
Q Consensus 359 ~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~~~--~~~~~-----~~~ 429 (543)
+| +.+.+.++..++.+..+.-.+.+-|+.||+|-| ....++....+++..+=. ... +..+. ...
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR------~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq 147 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR------TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQ 147 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH------HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhH
Confidence 36 666677777899999999999999999999765 677788888888876522 211 12222 333
Q ss_pred HHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhh
Q 009130 430 MIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRI 478 (543)
Q Consensus 430 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l 478 (543)
.+.+...-......+=+..-.||+++|++|..+..+++.+|.. ++.++
T Consensus 148 ~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGva-vg~ll 195 (480)
T KOG2563|consen 148 SIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVA-VGFLL 195 (480)
T ss_pred HHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHH-HHhhc
Confidence 3444433333322223445668999999998888777666653 44333
No 260
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.18 E-value=0.0047 Score=59.20 Aligned_cols=188 Identities=9% Similarity=0.048 Sum_probs=99.9
Q ss_pred HHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCC--chhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 322 LLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYS--TTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 322 ~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s--~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
+.+..+||......+...+...+++-..++....-++..-+ ..-.|..=++..+.++++.+..|.+.-...| .+
T Consensus 227 l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r----~g 302 (433)
T KOG3810|consen 227 LQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR----WG 302 (433)
T ss_pred HHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch----hh
Confidence 34455677654444444555455554554444444444211 1112223345556666777777777554432 22
Q ss_pred hHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIA-SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRI 478 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l 478 (543)
..++.++.+..+...+.+. ..+.+..++.-+++..-+....++...-+++-...|..|..+|+-....-+-. .++
T Consensus 303 ~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQ----sil 378 (433)
T KOG3810|consen 303 DLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQ----SIL 378 (433)
T ss_pred HHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHH----Hhh
Confidence 3455555544444444454 45666677777777777776666777777777888889999988654433322 223
Q ss_pred hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHH
Q 009130 479 IGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVA 518 (543)
Q Consensus 479 ~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 518 (543)
.-.+.|..|-.-+-..+ ..-|..=|.+.+++.+++..+.
T Consensus 379 T~iVvd~~g~~L~ir~Q-~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 379 TLIVVDDRGLGLDIRTQ-FVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred eEEEEcccccCCCccee-EEEEeehHHHHHHHHHHHHHHH
Confidence 33445544422211111 1112233566666666665553
No 261
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.18 E-value=0.0045 Score=63.68 Aligned_cols=131 Identities=14% Similarity=0.190 Sum_probs=96.4
Q ss_pred HHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHh--hhhhhhhhHHHHHHhhc
Q 009130 374 SIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGV--CYGSQWSLMPTITSEIF 451 (543)
Q Consensus 374 ~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~--~~g~~~~~~~~~~~~~~ 451 (543)
++...+..+..|.++|++||| ..+....+...+..++..... +++++ +.++ +++..++...++++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk------~~L~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK------VVLLLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh------hhHHHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheeecc
Confidence 677888999999999999765 566666666655554444322 22222 4443 34555667778899999
Q ss_pred CCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 009130 452 GVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFLRTRR 527 (543)
Q Consensus 452 ~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 527 (543)
..++|...+|+++.....+. .++|.+.+.+.+..+ +-..|++..+..++..+...+..+|...
T Consensus 142 ~~~~R~~~~gll~~~~~~~~-~~~p~~~~~~~~~~~------------~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGL-VIGPALGGYLVKFLG------------IALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred chhHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhcC------------chHHHHHHHHHHHHHHHHHhhccccccC
Confidence 99999999999988777777 477888888888766 7888999998888888887777766543
No 262
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.12 E-value=0.00078 Score=50.94 Aligned_cols=71 Identities=13% Similarity=0.118 Sum_probs=61.4
Q ss_pred ccccccccHHHHhhcCCChhhHHHHHHHhhhcccc-cchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHH
Q 009130 29 TYTFSIYSSTLKSTQNYDQSTLERVAVFKDMGGSA-GILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYF 107 (543)
Q Consensus 29 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~ 107 (543)
.|.|+.+.|.+++|.++|.+|.+++.+...+|+.. .+...++.++.. +|+.+..+++..++.++
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~---------------~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR---------------PRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------HHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999985 446777788765 78889999999999888
Q ss_pred HHHHHHhccCCC
Q 009130 108 LVWASVVGLLPR 119 (543)
Q Consensus 108 ~~~~~~~~~~~~ 119 (543)
. +++.++
T Consensus 73 ~-----ma~~~~ 79 (85)
T PF06779_consen 73 A-----MALTHS 79 (85)
T ss_pred H-----HHHHhc
Confidence 8 777666
No 263
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.06 E-value=0.012 Score=50.65 Aligned_cols=108 Identities=10% Similarity=-0.059 Sum_probs=80.8
Q ss_pred CchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhh
Q 009130 362 STTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWS 441 (543)
Q Consensus 362 s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 441 (543)
++.......++......++.++.+.+.+++|.| +.+.++.+..++-...+..++.+.++.+.++.|++.+..++
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K------~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPK------WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhH
Confidence 333444455666777777888888888998654 77888877777655555556667788899999999999999
Q ss_pred hHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhh
Q 009130 442 LMPTITSEIFGVRHMGTIFNTISIACPVGSYICSV 476 (543)
Q Consensus 442 ~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~ 476 (543)
....++.+...++++++..|+.......+. ++|.
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~-i~G~ 142 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSL-IFGN 142 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHH-HHHH
Confidence 999999999888999999888766555554 3443
No 264
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.99 E-value=0.0036 Score=53.95 Aligned_cols=101 Identities=8% Similarity=-0.126 Sum_probs=79.9
Q ss_pred hhhcccccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcC
Q 009130 57 KDMGGSAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHA 136 (543)
Q Consensus 57 ~~~~~~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 136 (543)
+....+..++.+.+.+++| +|+++++|.+..++-... .+-++ .+.++...++.|+|
T Consensus 47 Y~~~~~s~l~~P~iv~~lg---------------~K~sm~lg~~~y~~y~~~------~~~~~---~~~l~~~s~l~G~~ 102 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLG---------------PKWSMILGSLGYAIYIAS------FFYPN---SYTLYPASALLGFG 102 (156)
T ss_pred HHHHHHHHHhHHHHHHHHh---------------hHHHHHHHHHHHHHHHHH------HHhhh---HHHHHHHHHHHhhh
Confidence 3333445677888999999 999999999988754444 23344 57888899999999
Q ss_pred cchhhhhHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHh
Q 009130 137 QNFFNTGNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTV 181 (543)
Q Consensus 137 ~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 181 (543)
.+..++..-.++.++-. ++|++..++..+....+.++|+.+.-..
T Consensus 103 ~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 103 AALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999899998886 5799999999999998888887554443
No 265
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.89 E-value=0.091 Score=51.35 Aligned_cols=169 Identities=9% Similarity=-0.066 Sum_probs=86.2
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCc
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWAR 399 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r 399 (543)
+-.+++++-|....++......-..+-+.-...+.-+.|.|++.++.+....+.--.+++.....|..+.+..+-...-|
T Consensus 256 k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lk 335 (510)
T KOG3574|consen 256 KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLK 335 (510)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHH
Confidence 34567777777665555444333333333333445567889998887776655444555555555544432110000001
Q ss_pred hHHHHHHHHHHHHHHHHHh--hcC-----cchHHHHHH----HHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhh
Q 009130 400 PIFMVITLVAMSIGHIAIA--SGF-----PGNLFVGTM----IVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACP 468 (543)
Q Consensus 400 ~~~~~~~~~~~~i~~~~~~--~~~-----~~~~~~~~~----l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 468 (543)
...+=+........++... ... +...++..+ +.+...-..+....+..+++.+|...|+.+.+.++..+
T Consensus 336 a~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsn 415 (510)
T KOG3574|consen 336 AVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSN 415 (510)
T ss_pred hhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHH
Confidence 1111111111111111111 111 111222222 22222222233444567788889999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhccCC
Q 009130 469 VGSYICSVRIIGRIYDRVASG 489 (543)
Q Consensus 469 ig~~i~~~~l~g~l~~~~g~~ 489 (543)
+|+. ....+..++.|..+.+
T Consensus 416 LGg~-wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 416 LGGN-WPGTVALWLADGLTVK 435 (510)
T ss_pred hcCC-cHHHHHHHhcccCcee
Confidence 9986 5556788888876543
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.84 E-value=0.056 Score=51.94 Aligned_cols=145 Identities=17% Similarity=0.227 Sum_probs=94.9
Q ss_pred hchHHHHHhhCCCc--hhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC--cch
Q 009130 350 NNIAQVGESLHYST--TEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGF--PGN 424 (543)
Q Consensus 350 ~~~~~~~~~~g~s~--~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~--~~~ 424 (543)
...+.+..+.+.+. ...+...+...+...++.++.|.++||.||| ..+..+.....++.++.. ..+ ...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR------KVLIIGLLLFLLGTLLLALAPNVGLAL 96 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch------HHHHHHHHHHHHHHHHHHhCccchHHH
Confidence 34455555555554 4778888999999999999999999999654 344444433333323322 222 344
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCC-cchhhHHHHHHh-hhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGV-RHMGTIFNTISI-ACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFML 502 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~ 502 (543)
+.+.....|++.+...+...+++.|.+++ ++++...+.... ...++. +++|.+.+.+.+. . ..+|+.
T Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~---------~~~~~~ 165 (338)
T COG0477 97 LLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGL-ALGPLLAGLLLGA-L---------LWGWRA 165 (338)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-H---------hcchHH
Confidence 55556567888888888888999999987 678888888877 455565 4666666666655 2 113777
Q ss_pred HHHHHHHHH
Q 009130 503 SFMIMAFVA 511 (543)
Q Consensus 503 ~f~~~~~~~ 511 (543)
.|.+.....
T Consensus 166 ~~~~~~~~~ 174 (338)
T COG0477 166 AFLLAALLG 174 (338)
T ss_pred HHHHHHHHH
Confidence 555554443
No 267
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.83 E-value=0.47 Score=50.40 Aligned_cols=179 Identities=9% Similarity=0.041 Sum_probs=108.3
Q ss_pred chhhHHHHHHHHHHHHH-cCCcccc-ccccHHHHhhcCCChhhHH-HHHHHhhhcccccchhhHhhhhcccccccccccc
Q 009130 9 TNSKWIATVASIWIQCS-VGTTYTF-SIYSSTLKSTQNYDQSTLE-RVAVFKDMGGSAGILSGLLFSYVTLNHHHHQTRT 85 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~-~g~~~~~-~~~~~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~G~l~d~~g~~~~~~~~~~ 85 (543)
++.+|.........-.+ -...|.+ +.+..++.+++|.+..++. .++.+........+.+++++|-|-
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~---------- 101 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFL---------- 101 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh----------
Confidence 45566654433222222 2223333 3456788899998887666 444443333345678999999995
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhcc---------------CCCCC--hHHHHHHHHHHHhcCcchhhhhHHHHH
Q 009130 86 RFLRGPWVVHFTGAILCFTGYFLVWASVVGL---------------LPRPV--PVPLMCLFIFTAAHAQNFFNTGNIVTG 148 (543)
Q Consensus 86 ~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~---------------~~~~~--~~~~~~~~r~l~G~g~g~~~~~~~~~~ 148 (543)
||-+++.++.++..+|.+++-+....- ...+. ....+....-+..+|.|..-+.....-
T Consensus 102 ----gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fG 177 (571)
T KOG1237|consen 102 ----GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFG 177 (571)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhc
Confidence 799999999999888866654432111 01100 012334455567789999999888888
Q ss_pred hhhcCC--C---C--cchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHH
Q 009130 149 VMNFGH--Y---S--GTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVS 201 (543)
Q Consensus 149 ~~~fp~--~---r--g~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 201 (543)
+|-|++ + + ..-+..+....++|..+.-.+.-+.-++.+|.+-+-+......++
T Consensus 178 adQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 178 ADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALA 237 (571)
T ss_pred ccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHH
Confidence 999971 1 2 245566666677777777666665555667766554443333333
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.74 E-value=0.00032 Score=73.84 Aligned_cols=126 Identities=12% Similarity=0.120 Sum_probs=2.8
Q ss_pred hHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-----------
Q 009130 352 IAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG----------- 420 (543)
Q Consensus 352 ~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~----------- 420 (543)
++++-+.++++.++.+.+.+.+-++..+..++..+..+|- +|.+.+..+.++++++.++++.+
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~ 99 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEE 99 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCCcccc
Confidence 3444455799999999999999999999999999988774 33456777778877777654310
Q ss_pred -C---------------------------------------cchHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHH
Q 009130 421 -F---------------------------------------PGNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIF 460 (543)
Q Consensus 421 -~---------------------------------------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~ 460 (543)
+ ...++++.++.|+|....++...+++-|..++++.+...
T Consensus 100 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYi 179 (539)
T PF03137_consen 100 ASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYI 179 (539)
T ss_dssp ----------------------------------------------------SSS-------------------------
T ss_pred ccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccch
Confidence 0 011345677889999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 461 NTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 461 g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
|++.....+|+. +|-.+++...+
T Consensus 180 Gi~~~~~~lGPa-~Gf~lg~~~L~ 202 (539)
T PF03137_consen 180 GILYAMSILGPA-LGFLLGSFCLR 202 (539)
T ss_dssp ------------------------
T ss_pred hhhhHHhhccHH-HHHHHHHHHHh
Confidence 999998888884 66555555443
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.51 E-value=0.02 Score=57.81 Aligned_cols=108 Identities=16% Similarity=0.265 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHh---hcCc-------chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc---hhhHHHHHHhhh
Q 009130 401 IFMVITLVAMSIGHIAIA---SGFP-------GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH---MGTIFNTISIAC 467 (543)
Q Consensus 401 ~~~~~~~~~~~i~~~~~~---~~~~-------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~ 467 (543)
++++++.++.++|.+++. .+.. ..++++..++++|.|+.=++..+...|.+++++ +-..+.....+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 467778888888887733 2222 357888889999999999999999999998763 455666778888
Q ss_pred hhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 468 PVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 468 ~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
++|+ ++++.+.+++.++.+ |...|.+.++..+++.+..+.-
T Consensus 82 n~G~-~~~~~~~~~i~~~~~------------~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGS-LFSPTLVPYIQQNYG------------WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHH-HHHHHCCCHHHHCS-------------HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhh-Hhhcccchhhccccc------------hhhhhhHHHHHHHHHHHHHHhC
Confidence 8998 477778888888876 9999999998888887765443
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.35 E-value=0.0085 Score=63.90 Aligned_cols=160 Identities=15% Similarity=0.165 Sum_probs=110.9
Q ss_pred hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-----------------
Q 009130 358 SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASG----------------- 420 (543)
Q Consensus 358 ~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~----------------- 420 (543)
..+++.++.+++.+.+-+++.+...+..+...|. .|.+.+.++.++++++.++.+.+
T Consensus 126 RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 126 RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hcCCCCCcceeEeeecccchhhhhHhHHHhcccc------CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 3589999999999999999999888888887776 33456667777777766654210
Q ss_pred --Cc--------------------------------c--hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHH
Q 009130 421 --FP--------------------------------G--NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIS 464 (543)
Q Consensus 421 --~~--------------------------------~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~ 464 (543)
++ . .++++.++.|+|....++...+++-|...+++-+...|++.
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 00 0 13445667889988999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhhhhhccCC-C--Ccccc-cc---chhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009130 465 IACPVGSYICSVRIIGRIYDRVASG-E--DHTCY-GT---HCFMLSFMIMAFVAFFGSLVAFLLFLR 524 (543)
Q Consensus 465 ~~~~ig~~i~~~~l~g~l~~~~g~~-~--~~~~~-~~---~~~~~~f~~~~~~~~~~~i~~~~~~~~ 524 (543)
....+|+. +|-.++++......+. . .+... .+ ..|-..|++.+.+.++..+..+++.++
T Consensus 280 ~~~~lGPa-iGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 280 SMAILGPA-IGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred HHHHhhhH-HHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999984 7766666654433222 1 11111 11 235556777777777777666655543
No 271
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.19 E-value=0.013 Score=59.75 Aligned_cols=122 Identities=12% Similarity=0.040 Sum_probs=87.9
Q ss_pred hhcCCChhhHHHHHHHhhhccc-ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 009130 41 STQNYDQSTLERVAVFKDMGGS-AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPR 119 (543)
Q Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 119 (543)
||.+-.+.-.|..+.....+=+ +-++++++..|+| +-+++..++...++=.+. .++.+|
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiG---------------Hv~v~~lgLa~~~~Rf~~-----~S~L~n 458 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIG---------------HVNVMYLGLACNVGRFLY-----YSYLQN 458 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhc---------------ccceeeehhhHHHHHHHH-----HHHhcC
Confidence 4555444444422222222222 2345777777777 999999999998888888 778888
Q ss_pred CChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC-CCCcchhHHHHHhh-hhhHHHHHHHHHHhcCCC
Q 009130 120 PVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG-HYSGTIVGILKGFV-GLSGAVLTQVYKTVCNGN 185 (543)
Q Consensus 120 ~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~-~lg~~i~~~l~~~l~~~~ 185 (543)
.|..+-.-+++|+-.+..+.+..++++...| +-|..+.+++...+ |+|--+|+.+++.+++..
T Consensus 459 ---~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 459 ---PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred ---chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 5888889999999999999999999999998 45888888877654 566666666666665443
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.18 E-value=0.1 Score=52.30 Aligned_cols=160 Identities=11% Similarity=0.118 Sum_probs=103.4
Q ss_pred hhchHHHHHh--hCCCchhhHHHH-HHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 009130 349 MNNIAQVGES--LHYSTTEINSLI-SLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA-SGFPGN 424 (543)
Q Consensus 349 ~~~~~~~~~~--~g~s~~~a~~~~-~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~-~~~~~~ 424 (543)
-.++.+|+.+ .|++.+|...-. .+..=......+....+.|.++.| +++++..+..++...++. .++...
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk------pviil~~~~~i~t~~lll~~~sv~~ 96 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK------PVIILQALSYIITWLLLLFGTSVLA 96 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHCcHHH
Confidence 4455556644 688887765433 333334455666778889999654 777777776666655554 455566
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 009130 425 LFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSF 504 (543)
Q Consensus 425 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f 504 (543)
+-+.-++.|+..+.- ...++++=...++++.-++.+....+..+|.. ++.. .|.+.-..+ ..+|....
T Consensus 97 mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~-~s~~-lgQllvs~~---------~~sy~~L~ 164 (412)
T PF01770_consen 97 MQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRF-ISSL-LGQLLVSFG---------GVSYFQLN 164 (412)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHhc---------CCCHHHHH
Confidence 667777878776653 35667777778889988888887666666653 3432 332222222 12488888
Q ss_pred HHHHHHHHHHHHHHHHHhhcch
Q 009130 505 MIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
++..+...+++++++++...+|
T Consensus 165 ~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 165 YISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCCc
Confidence 8888888888888888765443
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.18 E-value=0.2 Score=51.70 Aligned_cols=145 Identities=11% Similarity=-0.011 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCC-----CchhhHHHHHHHHHHHhhh-ccccccchhhhhhhcCCCchHH
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHY-----STTEINSLISLWSIWNFFG-RFGAGYGSDVFLHKLGWARPIF 402 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~a~~~~~~~~i~~~ig-~~~~G~lsD~~~~~~~~~r~~~ 402 (543)
+.+....+++|+..+.++ .+-+.-..... +.+...++.+...+...+. .++.+++++|+.|+ .+
T Consensus 7 ~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~------~l 76 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE------AL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------Hh
Confidence 456666666666543322 12222222333 3355666666555555555 77889999999654 34
Q ss_pred HHHHHHHHHHHHHHHh-----hcCc---------------------------chHHHHHHHHHhhhhhhhh-hHHHHHHh
Q 009130 403 MVITLVAMSIGHIAIA-----SGFP---------------------------GNLFVGTMIVGVCYGSQWS-LMPTITSE 449 (543)
Q Consensus 403 ~~~~~~~~~i~~~~~~-----~~~~---------------------------~~~~~~~~l~G~~~g~~~~-~~~~~~~~ 449 (543)
.-+........+.++. ..+. +...+.-+..-+......+ .....+.|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333222221 1000 0011112222333344455 67789999
Q ss_pred hcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 450 IFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 450 ~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
.+.+++..+-++++.+++++|. ++++.+..++.+
T Consensus 157 i~t~~qakRfy~l~~~ganlg~-i~sg~~~~~~~~ 190 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVAL-IFSGRTIKYFSK 190 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999999999999998 477767666653
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.03 E-value=0.002 Score=63.16 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=3.2
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHH--HHHHHHHHHH-h----------hcCcchHHHHHHHHHh
Q 009130 368 SLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL--VAMSIGHIAI-A----------SGFPGNLFVGTMIVGV 434 (543)
Q Consensus 368 ~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~--~~~~i~~~~~-~----------~~~~~~~~~~~~l~G~ 434 (543)
..+..++++..+||.+.++.- +-++ +++++...+. ++.+..+++. . ..+.+..++..+++|+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~-~~~~----~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~ 260 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPR-WPGP----SPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeE-eccc----ccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH
Confidence 356689999999999887642 1111 1223332211 1111111111 0 1233445666778899
Q ss_pred hhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhh
Q 009130 435 CYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVG 470 (543)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig 470 (543)
..|-..+....+.++..+++++..+-.++...-.+|
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp ------HHHH--------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 988888888888888888777766655554444444
No 275
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.02 E-value=0.028 Score=42.59 Aligned_cols=70 Identities=13% Similarity=-0.027 Sum_probs=56.4
Q ss_pred hhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh
Q 009130 344 SGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS 419 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~ 419 (543)
.-+.+...+|.+.+|.++|.++++++.+...++..+|.+...++.++. ++...+..+.+...+.++.++.
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~------~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS------RPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999999999999999999999887774 2235666677777777666663
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.97 E-value=0.012 Score=43.95 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=40.2
Q ss_pred ccccHHHHhhcCCChhhHHHHHHHhhhcc-cccchhhHhhhhcccccccccccccccCCchHHHHHHHHHH
Q 009130 33 SIYSSTLKSTQNYDQSTLERVAVFKDMGG-SAGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILC 102 (543)
Q Consensus 33 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~ 102 (543)
-++.|...++.|+++.|++.+....-+.. ...+++|.++||++ +++.......++
T Consensus 20 ~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~---------------~~~~~l~~~~~~ 75 (77)
T PF12832_consen 20 YPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFG---------------KRKVILLGSLFM 75 (77)
T ss_pred HhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------ccHHHHHHHHHH
Confidence 34445566689999999996655555554 47889999999998 777776665543
No 277
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.86 E-value=0.034 Score=55.63 Aligned_cols=125 Identities=11% Similarity=0.052 Sum_probs=85.1
Q ss_pred hhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-------
Q 009130 347 ATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS------- 419 (543)
Q Consensus 347 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~------- 419 (543)
.=..+++++.+++|.+....+..-...-+.+.+-+++.|..+||..-|.+ +|++.+....+...+++.++..
T Consensus 50 ~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-RRRPfI~~~s~~i~~~l~Lig~aaDig~~ 128 (498)
T KOG0637|consen 50 LELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG-RRRPFILAGSLLIAVSLFLIGYAADIGLL 128 (498)
T ss_pred HHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccc-cccchHHHhhHHHHHHHhhhhhHhhhhHH
Confidence 34677889999999998888877777778888999999999998765543 4456666666666666554321
Q ss_pred --cCcc----hHHHHHH-----HHHhhhhhhhhhHHHHHHhhcCCcchhh-HHHHHHhhhhhhhh
Q 009130 420 --GFPG----NLFVGTM-----IVGVCYGSQWSLMPTITSEIFGVRHMGT-IFNTISIACPVGSY 472 (543)
Q Consensus 420 --~~~~----~~~~~~~-----l~G~~~g~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~ig~~ 472 (543)
.+.. ..-+... +.-+.........-++..|...++++.+ +++......++|+.
T Consensus 129 lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 129 LGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred hcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 1111 1222233 3334555556667788999988877777 88877777777773
No 278
>PRK03612 spermidine synthase; Provisional
Probab=95.53 E-value=0.39 Score=50.57 Aligned_cols=123 Identities=19% Similarity=0.139 Sum_probs=66.0
Q ss_pred hhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHH--HHHHHHHHHHHHHh---hcCc--chHHHHHH
Q 009130 358 SLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMV--ITLVAMSIGHIAIA---SGFP--GNLFVGTM 430 (543)
Q Consensus 358 ~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~--~~~~~~~i~~~~~~---~~~~--~~~~~~~~ 430 (543)
-+|-+....+...+++..+..+|..+.+++.++..++. .... ++.+......++.. .... ...+...+
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-----~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 118 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-----VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVL 118 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35888888888888898888899988887754332210 1111 11111111111111 1001 11233445
Q ss_pred HHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhh-hhcc
Q 009130 431 IVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIY-DRVA 487 (543)
Q Consensus 431 l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~-~~~g 487 (543)
+.++..|..+|...-+..+. ..++.+...|-+...+.+|+ ++|.++.+++. ...|
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa-~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGA-LVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHH-HHHHHHHHHHHHHhcc
Confidence 56777777766655544432 22345666677777777777 36666666654 3555
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.96 E-value=1.3 Score=42.28 Aligned_cols=89 Identities=13% Similarity=0.149 Sum_probs=54.6
Q ss_pred cchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhh
Q 009130 64 GILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTG 143 (543)
Q Consensus 64 ~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~ 143 (543)
.+....+.||+- +|.|.. +..++-+.+.++ .++..+ .+.-+.+-.+..++.|.....
T Consensus 79 Kl~~Pff~~rfp-------------f~~Ri~--~~v~~sa~s~~l-----Vafs~s---~~~sL~GV~~aSissGlGEiT 135 (409)
T KOG3880|consen 79 KLTAPFFIHRFP-------------FGFRIA--LVVLLSALSFFL-----VAFSNS---VPMSLLGVVFASISSGLGEIT 135 (409)
T ss_pred HHhchhhhhhcc-------------cchHHH--HHHHHHhcceEE-----EEeccc---hhHHHhhhhhhhhcCCcceee
Confidence 445566677764 556643 344566777777 677665 677777777888888877665
Q ss_pred HHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHH
Q 009130 144 NIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYK 179 (543)
Q Consensus 144 ~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~ 179 (543)
-.. ++..+|+. +.+-...|.|.++.+|+.-..
T Consensus 136 FL~-lss~Y~~~---~i~~WSSGTGgAGliGa~SYa 167 (409)
T KOG3880|consen 136 FLA-LSSRYPSI---VIAGWSSGTGGAGLIGASSYA 167 (409)
T ss_pred hhh-hhccCCCc---eeccccCCCCcchhhhhhHHH
Confidence 444 34445422 233345666667777764333
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.44 E-value=0.15 Score=51.36 Aligned_cols=117 Identities=9% Similarity=0.034 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCC----CcchhHHHHHhh
Q 009130 93 VVHFTGAILCFTGYFLVWASVVGLLP-RPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHY----SGTIVGILKGFV 167 (543)
Q Consensus 93 ~~~~~g~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~----rg~~~gi~~~~~ 167 (543)
|++++|.++..+|.+++.++...... +......++++-.+.++|.|..-+......+|-|+++ |......+..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67889999999999995543222111 0012356777788899999999999999999999632 456677888999
Q ss_pred hhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhee
Q 009130 168 GLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVR 209 (543)
Q Consensus 168 ~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (543)
++|+.++..+..++-++.+|.+.|.++.+..+++++....-+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 999999988888888888999999888888888777665543
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.16 E-value=7 Score=39.26 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=55.2
Q ss_pred hhHHHHHH-HHHHHhhhccccccchhhhhhhcCCCchHHHHHHH---HHHHHHHHHHh------hcCcchHHHHHHHHHh
Q 009130 365 EINSLISL-WSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITL---VAMSIGHIAIA------SGFPGNLFVGTMIVGV 434 (543)
Q Consensus 365 ~a~~~~~~-~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~---~~~~i~~~~~~------~~~~~~~~~~~~l~G~ 434 (543)
..-..... +++...+|++...+.-+.= ||.+..... +.......+.. ..+..+......++|+
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~~-------~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lgl 355 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWPD-------PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGL 355 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCCC-------CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHh
Confidence 34444456 8899999988777665542 122222221 11111111111 2345567777888899
Q ss_pred hhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 435 CYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 435 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
..|-..++...+.++..+++++- +.|.+.....+++
T Consensus 356 snGYltsl~m~~aPk~v~~~e~e-~aG~~m~~fl~~G 391 (406)
T KOG1479|consen 356 SNGYLTSLIMMYAPKQVKPSEKE-AAGNLMVFFLVGG 391 (406)
T ss_pred ccchHhhheehhcCCCCChHHHH-HHHHHHHHHHHHH
Confidence 88877777777888887765544 4444443343444
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.45 E-value=1.2 Score=45.56 Aligned_cols=96 Identities=6% Similarity=-0.083 Sum_probs=79.9
Q ss_pred HHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhhhhhhHHHHHHh
Q 009130 370 ISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGVCYGSQWSLMPTITSE 449 (543)
Q Consensus 370 ~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 449 (543)
.++......+..++.+.+.|+++. |+.+.++.....+..+.+...|.+.++....+.|+|.+..+.-...+.+|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~------K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGP------KWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhH------HHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhh
Confidence 678888888999999999999955 48888888888877777777888889999999999999888888889999
Q ss_pred hcCCcchhhHHHHHHhhhhhhh
Q 009130 450 IFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 450 ~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
...+|...++.++.......+.
T Consensus 130 ~st~~tie~Nisi~Wai~~~~l 151 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSL 151 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHH
Confidence 9998888888888755444443
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.21 E-value=8.4 Score=39.47 Aligned_cols=55 Identities=9% Similarity=0.124 Sum_probs=37.1
Q ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009130 456 MGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLFL 523 (543)
Q Consensus 456 ~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 523 (543)
....++.+--.=.+.. +++|++.|.+.+..+ +..+..+.++..+++..+=+++..
T Consensus 147 La~~NA~mRRIDL~ck-llaPl~vG~l~t~~s------------~~~~~~~i~~~N~~S~~vEy~~l~ 201 (432)
T PF06963_consen 147 LARMNATMRRIDLFCK-LLAPLFVGLLMTFAS------------PVIAAIFIAGWNLASVFVEYFLLA 201 (432)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHhhccC------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444432223344 578888999888765 788888888999998887555443
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.82 E-value=18 Score=37.71 Aligned_cols=116 Identities=10% Similarity=-0.102 Sum_probs=62.7
Q ss_pred HHHHHhhhccc--ccchhhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhc----cCCCCC----
Q 009130 52 RVAVFKDMGGS--AGILSGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVG----LLPRPV---- 121 (543)
Q Consensus 52 ~~~~~~~~~~~--~~~~~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~----~~~~~~---- 121 (543)
.+-....+... +.....++.++++ +++++-+-...+..-..++++..-. +.++..
T Consensus 62 flK~~~vlP~a~~f~~~y~kl~n~~s---------------~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~ 126 (491)
T PF03219_consen 62 FLKVWGVLPVAILFTILYSKLSNRLS---------------REKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKL 126 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---------------HHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHh
Confidence 44343444332 4556888888887 8888777766666666665553221 111100
Q ss_pred ---------------hHHHHHHHHHHHhcCcchhhh-hHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhc
Q 009130 122 ---------------PVPLMCLFIFTAAHAQNFFNT-GNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVC 182 (543)
Q Consensus 122 ---------------~~~~~~~~r~l~G~g~g~~~~-~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 182 (543)
..|.+.++.++.-+-...... .-....++.++ +|-.+..+++..+.++|.++++.+..++.
T Consensus 127 ~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 127 LAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111222222222222211 23455677776 55666778888888888888877766653
No 285
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.26 E-value=3 Score=41.19 Aligned_cols=65 Identities=12% Similarity=-0.013 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHhhhchhhhhhhchHHHHHhhCCCchhhHHHHHHHHHHHhhhccccccchh-----hhhhhcC
Q 009130 329 GNFWFLCIATLCGMGSGIATMNNIAQVGESLHYSTTEINSLISLWSIWNFFGRFGAGYGSD-----VFLHKLG 396 (543)
Q Consensus 329 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD-----~~~~~~~ 396 (543)
+++..+...+.. .+.-++....+|.+++..|.|-++.+.....+.=. --.+++..+.| |+|||+.
T Consensus 31 ~~illLl~LYll-QGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 31 SSILLLLFLYLL-QGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhHHHHHHHHHH-cCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccc
Confidence 344444444433 45555666788999988888766555443333222 24678999999 7777654
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.69 E-value=0.57 Score=43.67 Aligned_cols=152 Identities=14% Similarity=0.041 Sum_probs=84.8
Q ss_pred HHhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhh
Q 009130 356 GESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIASGFPGNLFVGTMIVGVC 435 (543)
Q Consensus 356 ~~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~ 435 (543)
++.+|+...+.+.++.......+....+.|-+.||-|||+ ...++++.. +++|+.=..+....+.+..++-|+.
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKr---acvtycitY---iLsCiTKhSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKR---ACVTYCITY---ILSCITKHSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccc---ceeeehHHH---HHHHHhhcCCceEEEeehhhhhhHH
Confidence 3556777777766654433344444556678899998873 222333333 3333322234455677888888988
Q ss_pred hhhhhhhHHH-HHHhhcCCcchhh-----HHH-HHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHH
Q 009130 436 YGSQWSLMPT-ITSEIFGVRHMGT-----IFN-TISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMA 508 (543)
Q Consensus 436 ~g~~~~~~~~-~~~~~~~~~~~g~-----~~g-~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~ 508 (543)
....++.+-+ ++.|...++.+.. .++ .....+.+-.+ ++...+..+.|..+- +.-.+|-..+
T Consensus 138 TsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAi-iaGlfgn~lvd~~sl----------GPVAPFdAAa 206 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAI-IAGLFGNLLVDTFSL----------GPVAPFDAAA 206 (454)
T ss_pred HHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHH-HHHHHHHHHHHHhcc----------CCCCchHHHH
Confidence 8888887765 5777765444322 111 11334444442 334445566666542 1335666666
Q ss_pred HHHHHHHHHHHHHhhc
Q 009130 509 FVAFFGSLVAFLLFLR 524 (543)
Q Consensus 509 ~~~~~~~i~~~~~~~~ 524 (543)
++..++..+.+--+.+
T Consensus 207 cfLaigmAvil~~W~E 222 (454)
T KOG4332|consen 207 CFLAIGMAVILSSWSE 222 (454)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 6666666555544444
No 287
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.61 E-value=1.7 Score=46.20 Aligned_cols=160 Identities=17% Similarity=0.203 Sum_probs=105.2
Q ss_pred hhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-----
Q 009130 345 GIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIA----- 418 (543)
Q Consensus 345 ~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~----- 418 (543)
.+++..++-.|+ .+++.+...+...+..+.-......+++++++|.+- +|-+++.++.++..++..++.
T Consensus 53 ~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~-----gry~tI~~~s~i~~~G~~~lt~~a~~ 127 (571)
T KOG1237|consen 53 FFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFL-----GRYFTINIGSLISLLGLFGLTLSAMI 127 (571)
T ss_pred HhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444554455 456888888888888888888889999999999874 556788887777666654332
Q ss_pred h---cC-------------c-----chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcch------hhHHHHHHhhhhhhh
Q 009130 419 S---GF-------------P-----GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHM------GTIFNTISIACPVGS 471 (543)
Q Consensus 419 ~---~~-------------~-----~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~------g~~~g~~~~~~~ig~ 471 (543)
. +. + ..++...-+..+|.|+.-+...+.-+|.+++++. ..-+.........|.
T Consensus 128 ~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~ 207 (571)
T KOG1237|consen 128 PALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGA 207 (571)
T ss_pred hhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHH
Confidence 0 10 0 0245555566778888888888888999983222 233444455566666
Q ss_pred hhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009130 472 YICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLLF 522 (543)
Q Consensus 472 ~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 522 (543)
. ++..+.-++-|..+ |...|-+..+..+++.++.+...
T Consensus 208 l-~a~t~~vyiq~~~~------------w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 208 L-LAQTVLVYIQDNVG------------WKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred H-HHHHHHHhhhhccc------------ceeeccHHHHHHHHHHHHHHcCc
Confidence 3 44333344445544 88889988888888877765543
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.15 E-value=15 Score=34.39 Aligned_cols=21 Identities=5% Similarity=-0.045 Sum_probs=16.4
Q ss_pred hhHHHhhcchhHHHHHHHHHh
Q 009130 320 MNLLQAMCTGNFWFLCIATLC 340 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~ 340 (543)
.+..+.+|++..|...+.+..
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred chHHHHHccchHHHHHHHHHH
Confidence 566889999999887776654
No 289
>PRK03612 spermidine synthase; Provisional
Probab=89.55 E-value=4.1 Score=43.03 Aligned_cols=78 Identities=10% Similarity=-0.069 Sum_probs=50.1
Q ss_pred HHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHHHHhcCC--CchhHHHHHHHHHHHHHHHHH
Q 009130 128 LFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVYKTVCNG--NPSTYILVLALLPTLVSLLFM 205 (543)
Q Consensus 128 ~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~ 205 (543)
...++.++-.|+..|....+..+.-.++-|...|-+.+...+|+++|+.+.++++-+ ....-.++.+.+..+.+++..
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344566677777777666655543333467778888889999999999888877532 334445555555555554433
No 290
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.47 E-value=5.5 Score=40.18 Aligned_cols=124 Identities=11% Similarity=0.078 Sum_probs=69.0
Q ss_pred HHHhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhhhhhhHHHHHHhhcCC
Q 009130 375 IWNFFGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS-GFPGNLFVGTMIVGVCYGSQWSLMPTITSEIFGV 453 (543)
Q Consensus 375 i~~~ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 453 (543)
+-..+-+++..+..+|+..+ .=+....+++++++++.+. ++...-++..++.++..|..=..+-.+ ...+++
T Consensus 70 ~P~l~~Kl~aP~fi~~v~y~------~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~ 142 (402)
T PF02487_consen 70 LPSLLVKLIAPFFIHRVPYW------IRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK 142 (402)
T ss_pred HHHHHHHHHhHhhhhhccch------HHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc
Confidence 34555666677777777432 1234455566777776663 455555666677777666554444444 345654
Q ss_pred cchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009130 454 RHMGTIFNTISIACPVGSYICSVRIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAFLL 521 (543)
Q Consensus 454 ~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 521 (543)
...+-+..+.+.++ ++|+...-.+.+ .|- +.+..+.++..+.++-.+..+++
T Consensus 143 ----~~l~~wssGTG~aG-l~Ga~~y~~lT~-~g~----------s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAG-LVGALYYLGLTT-LGL----------SPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred ----cccccccCCcChhh-HHHHHHHHHHHH-hCc----------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 23455555556665 466655544444 431 36777777766554444433333
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=77.56 E-value=49 Score=33.39 Aligned_cols=49 Identities=4% Similarity=-0.105 Sum_probs=28.5
Q ss_pred hhhhhhhchHHHHHhh-CCCchhhHHHHHHHHHHHhhhccccccchhhhhhh
Q 009130 344 SGIATMNNIAQVGESL-HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHK 394 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~ 394 (543)
....+++..+++..++ +.+. +......+.+...+..++.-.+--+...|
T Consensus 33 pWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred chHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555555555 4443 55555667777777777776666666554
No 292
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.21 E-value=1.5e+02 Score=31.16 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=33.5
Q ss_pred hHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 009130 442 LMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYD 484 (543)
Q Consensus 442 ~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~ 484 (543)
.....+.|.+..++..+-++++.++.++|.+ +++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli-~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLI-FSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4677889999999999999999999999984 55555555554
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=68.88 E-value=1.5e+02 Score=30.80 Aligned_cols=156 Identities=10% Similarity=-0.027 Sum_probs=81.3
Q ss_pred chhhHHHHHHHHHHHHHcCCccccccccHHHHhhcCCChhh---HHHHHHHhhhccc--ccchhhHhhhhcccccccccc
Q 009130 9 TNSKWIATVASIWIQCSVGTTYTFSIYSSTLKSTQNYDQST---LERVAVFKDMGGS--AGILSGLLFSYVTLNHHHHQT 83 (543)
Q Consensus 9 ~~~~w~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~s~~~---~~~~~~~~~~~~~--~~~~~G~l~d~~g~~~~~~~~ 83 (543)
+++.|--.+...+++.+.+.+|+ .+ -.+++.+.++... +..+-+...+-.. +.++.+++.+++.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~--~l-R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt-------- 90 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYN--LL-RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILT-------- 90 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH--HH-HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcC--------
Confidence 34455544444444444444433 22 4566777665333 3344444444322 4667888888887
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHHHHhccC----CCC---------C-----------hHHHHHHHHHHHhcCcch
Q 009130 84 RTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLL----PRP---------V-----------PVPLMCLFIFTAAHAQNF 139 (543)
Q Consensus 84 ~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~----~~~---------~-----------~~~~~~~~r~l~G~g~g~ 139 (543)
+++++-+-...+..-.++++...-... +++ . +.|...++.++.=+-.+.
T Consensus 91 -------~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgsl 163 (509)
T COG3202 91 -------REKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSL 163 (509)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHH
Confidence 888877777777666666555432111 000 0 012222333333222222
Q ss_pred hhh-hHHHHHhhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhc
Q 009130 140 FNT-GNIVTGVMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVC 182 (543)
Q Consensus 140 ~~~-~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 182 (543)
... .-....+|... +|-.+-.+.++.+.+++..+.+.+..++.
T Consensus 164 V~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 164 VLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 22334455665 45566777777777777777777666654
No 294
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=62.78 E-value=14 Score=33.77 Aligned_cols=99 Identities=7% Similarity=-0.028 Sum_probs=59.5
Q ss_pred hhHhhhhcccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHH
Q 009130 67 SGLLFSYVTLNHHHHQTRTRFLRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIV 146 (543)
Q Consensus 67 ~G~l~d~~g~~~~~~~~~~~~~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~ 146 (543)
.+.+.||||+++..-+|-+ -+.++|.++-++-.-+++-...+.- ...=.....=.|+|+|.....+..
T Consensus 127 laiI~ekYGldSpEgrGVl-------~~Yi~GTvfGtiffsllas~~a~~~-----~fhP~ALAMasGvGSgSMMaAa~~ 194 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVL-------GVYIIGTVFGTIFFSLLASLLASLG-----IFHPYALAMASGVGSGSMMAAASG 194 (241)
T ss_pred eeeeehhcCCCCccccceE-------EEeeehhhHHHHHHHHHHHHHHhcc-----CCCHHHHHHHcCCcHHHHHHHHHH
Confidence 5667777775554444332 3344444444333333221112221 112233344578999999999999
Q ss_pred HHhhhcCCCCcchhHHHHHhhhhhHHHHHHH
Q 009130 147 TGVMNFGHYSGTIVGILKGFVGLSGAVLTQV 177 (543)
Q Consensus 147 ~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l 177 (543)
.+.+.+|+......++..+.+-+.++.+-.+
T Consensus 195 aL~~~~P~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 195 ALAAAYPEMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877788888888887777777543
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=59.08 E-value=19 Score=30.73 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=24.9
Q ss_pred hhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 440 WSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
..+.+.+.+..+++++-|+..|+-.+-.+++-
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 45677788888998889999988777666655
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=58.13 E-value=1.7e+02 Score=27.62 Aligned_cols=26 Identities=8% Similarity=-0.291 Sum_probs=14.7
Q ss_pred HHHHHhhhchhhhhhhchHHHHHhhC
Q 009130 335 CIATLCGMGSGIATMNNIAQVGESLH 360 (543)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~g 360 (543)
.+...+..+..++....-..|.++.+
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCc
Confidence 33334444666666666666776654
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=55.37 E-value=2.2e+02 Score=28.24 Aligned_cols=113 Identities=16% Similarity=0.137 Sum_probs=59.7
Q ss_pred HHHHHHHhhhchhhhhhhchHHHHHhh-CCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCCchHH--HHHHHHH
Q 009130 333 FLCIATLCGMGSGIATMNNIAQVGESL-HYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWARPIF--MVITLVA 409 (543)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~r~~~--~~~~~~~ 409 (543)
.+.++.+++..++...-..+....+.+ |=+.-+.+.+.+.+-....+|+.+.-++.|.--. .|... ...+++.
T Consensus 11 lL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~----~~Fv~vElllglig 86 (508)
T COG4262 11 LLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAAL----ARFVDVELLLGLIG 86 (508)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHH----HHHHHHHHHHHHhc
Confidence 344444444444555444455555554 5555677778888877777888877777664311 00000 1112211
Q ss_pred ---HHHHHHHHhhc---CcchHHHHHHHHHhhhhhhhhhHHHHHHh
Q 009130 410 ---MSIGHIAIASG---FPGNLFVGTMIVGVCYGSQWSLMPTITSE 449 (543)
Q Consensus 410 ---~~i~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 449 (543)
..+.++.++.. +...+++...++|.-.|.-.+....+...
T Consensus 87 g~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 87 GVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred cchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 11222234422 23446667778888778777666555443
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.48 E-value=13 Score=29.17 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=20.6
Q ss_pred chhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 455 HMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 455 ~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
.++.+.++-...-.++++++|. ..|++.|++.
T Consensus 39 ~k~~~~a~klssefIsGilVGa-~iG~llD~~a 70 (116)
T COG5336 39 IKGYAQAFKLSSEFISGILVGA-GIGWLLDKFA 70 (116)
T ss_pred hhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 3455555555556666666664 7889998764
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=49.28 E-value=3.3e+02 Score=28.42 Aligned_cols=41 Identities=10% Similarity=0.156 Sum_probs=30.4
Q ss_pred hHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhh
Q 009130 442 LMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIY 483 (543)
Q Consensus 442 ~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~ 483 (543)
+....+.|....++..+-+++.+++.+++.. ++..+..++.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~ll-lsg~~~~~~~ 208 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLL-LSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 4556778888889999999999999999875 4444444443
No 300
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=48.14 E-value=2.4e+02 Score=26.49 Aligned_cols=53 Identities=9% Similarity=-0.090 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCcchhhhhHHHHHhhhcCCCCcchhHHHHHhhhhhHHHHHHHH
Q 009130 123 VPLMCLFIFTAAHAQNFFNTGNIVTGVMNFGHYSGTIVGILKGFVGLSGAVLTQVY 178 (543)
Q Consensus 123 ~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~ 178 (543)
...+.......|+-.. .........+..| +|.....+..++.+++..+...+.
T Consensus 34 ~~FyY~sg~~lGv~~s--~li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~ 86 (249)
T PF10225_consen 34 VLFYYSSGISLGVLAS--LLILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLW 86 (249)
T ss_pred hhHHHhhhHHHHHHHH--HHHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHH
Confidence 4556666666655322 2345556789999 666556666666666665554443
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=45.30 E-value=98 Score=32.77 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=43.4
Q ss_pred HHhhcchhHHHHHHHHHhhhchhhhhhhchHHHHHhhC-CCchhhHHHHHHHHHHHhhhccccccchhhhhhh
Q 009130 323 LQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVGESLH-YSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHK 394 (543)
Q Consensus 323 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~ 394 (543)
.|++|.|.- ...++.+...|.....+.....++...| +++..-+.+.+..-+.-+++..++|+.+-|+-+.
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 577887773 4455555666666655555444444444 4555555666666666666777777777777554
No 302
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=36.47 E-value=2.6e+02 Score=27.07 Aligned_cols=60 Identities=13% Similarity=0.043 Sum_probs=33.7
Q ss_pred hhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCC
Q 009130 150 MNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGT 213 (543)
Q Consensus 150 ~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (543)
--+| ...|...=.....+|...+ .+.+..+.....|..++..+|+.+....+.+..+..|
T Consensus 140 Gp~PlgY~gLGEi~~~vffG~l~v----~g~~yiqt~~~~~~~ll~slp~gil~~~Il~aNNirD 200 (303)
T COG1575 140 GPFPLGYMGLGEIFVGVFFGPLIV----LGAYYIQTGRLSWAILLPSLPVGILIANILLANNLRD 200 (303)
T ss_pred CCcCcccCCHHHHHHHHHHHHHHH----HHHHHHhcccchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3456 4566544444444443333 3345556666677777777777777666665554443
No 303
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=36.06 E-value=82 Score=22.24 Aligned_cols=15 Identities=7% Similarity=-0.006 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHH
Q 009130 505 MIMAFVAFFGSLVAF 519 (543)
Q Consensus 505 ~~~~~~~~~~~i~~~ 519 (543)
|...+.+++..+..+
T Consensus 20 WlA~~~tll~l~~l~ 34 (67)
T COG3114 20 WLAVGMTLLPLAVLV 34 (67)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444433
No 304
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=35.11 E-value=4.9e+02 Score=26.84 Aligned_cols=38 Identities=5% Similarity=0.041 Sum_probs=17.7
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhh
Q 009130 429 TMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGS 471 (543)
Q Consensus 429 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~ 471 (543)
.++.|++.+...+...++++ .+|++ ..+.+..+.++++
T Consensus 113 v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aG 150 (437)
T TIGR00939 113 VVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAG 150 (437)
T ss_pred HHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHH
Confidence 34455555544444444443 56643 2333344444444
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.23 E-value=1e+02 Score=24.45 Aligned_cols=20 Identities=25% Similarity=0.252 Sum_probs=13.0
Q ss_pred HHHhhhccccccchhhhhhh
Q 009130 375 IWNFFGRFGAGYGSDVFLHK 394 (543)
Q Consensus 375 i~~~ig~~~~G~lsD~~~~~ 394 (543)
+++++.....||+.||+...
T Consensus 53 IsGilVGa~iG~llD~~agT 72 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 34444455668999999653
No 306
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=29.81 E-value=8.1e+02 Score=27.21 Aligned_cols=57 Identities=18% Similarity=0.012 Sum_probs=35.0
Q ss_pred Hhhhhcccccccccccccc---cCCchHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhh
Q 009130 69 LLFSYVTLNHHHHQTRTRF---LRGPWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNT 142 (543)
Q Consensus 69 ~l~d~~g~~~~~~~~~~~~---~~g~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~ 142 (543)
.|-|||| ++-.|+++- -|--.+++.+|..+.+.|..+ .++...+ |++|.++---..|
T Consensus 473 vLRDKfG---~sv~g~lVva~laWPsPwVi~IGsFlST~GAgL-----QsLtgAP---------RLLQAIAkD~IiP 532 (1075)
T KOG2082|consen 473 VLRDKFG---QSVGGNLVVATLAWPSPWVIVIGSFLSTCGAGL-----QSLTGAP---------RLLQAIAKDDIIP 532 (1075)
T ss_pred hhhhhhh---hhccCcEEEEEecCCCceeeehhHHHHHhHHHH-----hhhcCcH---------HHHHHHhhcCccc
Confidence 4567876 222222221 133456788888888888888 6665544 8888877555444
No 307
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=27.77 E-value=1.1e+02 Score=30.18 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=33.2
Q ss_pred hhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh----cCcchHHHHHHHHHhhhhhhhhhHHHHHHh
Q 009130 379 FGRFGAGYGSDVFLHKLGWARPIFMVITLVAMSIGHIAIAS----GFPGNLFVGTMIVGVCYGSQWSLMPTITSE 449 (543)
Q Consensus 379 ig~~~~G~lsD~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 449 (543)
..+++.+.+..++|.| +++..+.. .+.++.. +....++-+.+..|++.+..++...+++++
T Consensus 73 ~s~m~~~~~Ir~~g~K------~tm~lav~----~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTK------WTMVLAVF----PYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred HHHHHHHHHHHHHhhH------HHHHHHHH----HHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 3444444666777543 45543332 2222222 222345667778899988888666555543
No 308
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=27.72 E-value=1.9e+02 Score=27.49 Aligned_cols=12 Identities=17% Similarity=0.465 Sum_probs=4.7
Q ss_pred HhhhhhhhhhHH
Q 009130 433 GVCYGSQWSLMP 444 (543)
Q Consensus 433 G~~~g~~~~~~~ 444 (543)
++..|..++..+
T Consensus 48 ~~lsG~~W~iGq 59 (269)
T PF06800_consen 48 AFLSGAFWAIGQ 59 (269)
T ss_pred HHHHHHHHHHHH
Confidence 333344444333
No 309
>PTZ00370 STEVOR; Provisional
Probab=25.91 E-value=1.9e+02 Score=27.53 Aligned_cols=33 Identities=9% Similarity=0.288 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHH
Q 009130 500 FMLSFMIMAFVAFFGSLVAFLLFLRTRRFYNQV 532 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 532 (543)
|..+-+++.++.++-.++.+++++|+|+.++.+
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK~swkhe 289 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRKNSWKHE 289 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 555556666666666666777777766665533
No 310
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=24.84 E-value=54 Score=30.84 Aligned_cols=140 Identities=8% Similarity=-0.026 Sum_probs=69.6
Q ss_pred hhHHHhhcchhHHHHHHHHHhhhchhhhhhhchHHHH-HhhCCCchhhHHHHHHHHHHHhhhccccccchhhhhhhcCCC
Q 009130 320 MNLLQAMCTGNFWFLCIATLCGMGSGIATMNNIAQVG-ESLHYSTTEINSLISLWSIWNFFGRFGAGYGSDVFLHKLGWA 398 (543)
Q Consensus 320 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~ig~~~~G~lsD~~~~~~~~~ 398 (543)
.++...+++-.|+.+++.+.+.-.....-..+++.+. .++.++.+..+++-.+..+.....+.+-.-+ ..=|+ +
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~ei-pwngk----r 266 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEI-PWNGK----R 266 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccC-CcCcc----e
Confidence 4445567788888888877665322222233344443 3466766666665566666555444332111 01111 1
Q ss_pred chHHHHHHHHHHHHHHHHHh--hcCc-chHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcc--hhhHHHHHH
Q 009130 399 RPIFMVITLVAMSIGHIAIA--SGFP-GNLFVGTMIVGVCYGSQWSLMPTITSEIFGVRH--MGTIFNTIS 464 (543)
Q Consensus 399 r~~~~~~~~~~~~i~~~~~~--~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~ 464 (543)
.+..+..+.++.+.+..... ..+. ...+....++|+...........+.++..+.+. .+-.+|.+.
T Consensus 267 lKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamS 337 (412)
T KOG4830|consen 267 LKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMS 337 (412)
T ss_pred eeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHH
Confidence 22344555555554444332 1221 224555666787776655444455666655443 333445443
No 311
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.39 E-value=1.7e+02 Score=27.57 Aligned_cols=23 Identities=4% Similarity=-0.024 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 009130 503 SFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 503 ~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
.=++..++.+++.++..+++.+.
T Consensus 117 Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 117 LNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHHHHheeeecCCC
Confidence 33455555566666555555443
No 312
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=23.13 E-value=2.4e+02 Score=20.58 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 009130 502 LSFMIMAFVAFFGSLVAFLLFLRT 525 (543)
Q Consensus 502 ~~f~~~~~~~~~~~i~~~~~~~~~ 525 (543)
..++++.-+.++++++++-+.++.
T Consensus 25 ~vll~LtPlfiisa~lSwkLaK~i 48 (74)
T PF15086_consen 25 TVLLILTPLFIISAVLSWKLAKAI 48 (74)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344555566777777777766543
No 313
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=23.03 E-value=2e+02 Score=20.81 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHhh
Q 009130 504 FMIMAFVAFFGSLVAFLLFLRTRRFYNQVVIRRL 537 (543)
Q Consensus 504 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 537 (543)
++......+++..+++++.++.|+.-.++..++.
T Consensus 33 ~~~~l~A~vis~~lS~~ll~~~R~~~~~~ia~~~ 66 (69)
T PF14012_consen 33 LVAALLALVISMPLSYVLLRRLRDRASADIAARD 66 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455567777788777766665555544443
No 314
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=22.54 E-value=1.7e+02 Score=23.24 Aligned_cols=28 Identities=14% Similarity=-0.069 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 009130 499 CFMLSFMIMAFVAFFGSLVAFLLFLRTR 526 (543)
Q Consensus 499 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 526 (543)
+|+.+|++...++++.+.+.+..++.++
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 5899988877777666666666665543
No 315
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=22.49 E-value=2.3e+02 Score=22.09 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 009130 500 FMLSFMIMAFVAFFGSLVAFL 520 (543)
Q Consensus 500 ~~~~f~~~~~~~~~~~i~~~~ 520 (543)
|--+|.+++++.+.++.....
T Consensus 52 WIFAFvI~avlfv~sl~vav~ 72 (97)
T PF08611_consen 52 WIFAFVIAAVLFVLSLVVAVP 72 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 666777888777777665443
No 316
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=22.11 E-value=1.9e+02 Score=23.18 Aligned_cols=77 Identities=14% Similarity=-0.008 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcCcchhhhhHHHHHhhhcC--CCC---cchhHHHHH
Q 009130 91 PWVVHFTGAILCFTGYFLVWASVVGLLPRPVPVPLMCLFIFTAAHAQNFFNTGNIVTGVMNFG--HYS---GTIVGILKG 165 (543)
Q Consensus 91 ~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~g~~~~~~~~~~~~~fp--~~r---g~~~gi~~~ 165 (543)
.-.....|.++..+.++. -.-.+- +.+.+.+..++.|+..|+. ..+.+=+.+-|| .|| .........
T Consensus 23 YE~~iilG~~~gn~~~~~-----~~~~~~--~~~~~~i~GL~~GiFvG~l-a~ALaEvlnv~PIlarRi~l~~~i~~li~ 94 (110)
T PF13782_consen 23 YEWAIILGAILGNIFSLF-----EISIPL--GPILLIIFGLFAGIFVGCL-AAALAEVLNVFPILARRIGLRRGIPYLIM 94 (110)
T ss_pred HHHHHHHHHHHHHHHHHH-----cccccc--cHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhchHHHHH
Confidence 344566666666655555 222222 2466677888888888865 334455566777 344 223344444
Q ss_pred hhhhhHHHHH
Q 009130 166 FVGLSGAVLT 175 (543)
Q Consensus 166 ~~~lg~~i~~ 175 (543)
+..+|-.+|+
T Consensus 95 aialGK~~Gs 104 (110)
T PF13782_consen 95 AIALGKVIGS 104 (110)
T ss_pred HHHHHHHHHH
Confidence 4445555554
No 317
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=20.82 E-value=6.6e+02 Score=24.43 Aligned_cols=65 Identities=11% Similarity=-0.044 Sum_probs=35.1
Q ss_pred hhhcC-CCCcchhHHHHHhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhheeccCCCCcc
Q 009130 149 VMNFG-HYSGTIVGILKGFVGLSGAVLTQVYKTVCNGNPSTYILVLALLPTLVSLLFMSHVRIYGTNSVD 217 (543)
Q Consensus 149 ~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (543)
..=+| ++||..--....++|.....+ .+..+...+.+..+...+|..+....+.+..+.+|.+.|
T Consensus 137 ~gP~~l~y~gLGE~~v~l~~G~l~v~g----~~yv~t~~~~~~~~~~sl~~gll~~~IL~~Nn~rD~e~D 202 (304)
T PRK07419 137 GPPFRLGYQGLGEPLCFLAFGPLAVAA----ALYSQTPSWSLIPLAASIILGLATSLILFCSHFHQVEDD 202 (304)
T ss_pred CCCcccCCCCchHHHHHHHHHHHHHHH----HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 34456 678864444444443333333 344444455555556666666666666677777765543
No 318
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=20.50 E-value=8.6e+02 Score=24.27 Aligned_cols=60 Identities=23% Similarity=0.347 Sum_probs=37.7
Q ss_pred hHHHHHHHHHhhhhhhhhhHHHHHHhhcCCcchhhHHHHHHhhhhhhhhhhhhhhhhhhhhhcc
Q 009130 424 NLFVGTMIVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTISIACPVGSYICSVRIIGRIYDRVA 487 (543)
Q Consensus 424 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ig~~i~~~~l~g~l~~~~g 487 (543)
......++.|...|+.+...|.+....++.++.=+..=+-.++..+... ++.+.+.|..+
T Consensus 113 l~~p~a~l~g~~~G~~wa~ipg~Lka~f~~nEVIttiMlNyIa~~l~~~----lV~~~~~~p~~ 172 (356)
T COG4603 113 LALPLALLAGAAGGGLWALIPGLLKARFGVNEVITTIMLNYIAVYLLNY----LVEGPLRDPAG 172 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH----HHcCcccCCCc
Confidence 3455567778888999999999999988877654443333344444433 23444555444
No 319
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.22 E-value=2.6e+02 Score=25.80 Aligned_cols=91 Identities=16% Similarity=0.007 Sum_probs=49.7
Q ss_pred hhc-cccccchhhhhhhcCCCch--HHHHHHHHHHHHHHHHHh----hcCcchHHHHHHHHHhhhhhhhhhHHHHHHhhc
Q 009130 379 FGR-FGAGYGSDVFLHKLGWARP--IFMVITLVAMSIGHIAIA----SGFPGNLFVGTMIVGVCYGSQWSLMPTITSEIF 451 (543)
Q Consensus 379 ig~-~~~G~lsD~~~~~~~~~r~--~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 451 (543)
++| +=.+.++||+|-+-..+|- -+++++.++..+.+-+++ ..++...+....-.|.|.+...+....-..+.+
T Consensus 121 I~REp~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 121 IGREPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred cccCcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 344 4458899999876444442 234555554444433332 123333344455668887777766666677777
Q ss_pred CCcchhhHHHHHHhhhhhh
Q 009130 452 GVRHMGTIFNTISIACPVG 470 (543)
Q Consensus 452 ~~~~~g~~~g~~~~~~~ig 470 (543)
| +...+..++-...+.+.
T Consensus 201 P-~~a~~i~A~AaaSNllt 218 (241)
T PF11299_consen 201 P-EMADQILAFAAASNLLT 218 (241)
T ss_pred c-chHHHHHHHHHHHHHHH
Confidence 6 55555554444433333
No 320
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.15 E-value=1.3e+02 Score=22.37 Aligned_cols=29 Identities=28% Similarity=0.354 Sum_probs=19.3
Q ss_pred hhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHHHHHH
Q 009130 477 RIIGRIYDRVASGEDHTCYGTHCFMLSFMIMAFVAFFGSLVAF 519 (543)
Q Consensus 477 ~l~g~l~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 519 (543)
++.|+..+. ++..+++.++..++++++.+
T Consensus 25 fi~Gy~~q~--------------~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 25 FIVGYITQS--------------FSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHH--------------HHHHHHHHHHHHHHHHhhee
Confidence 467777664 66777777776666666544
Done!