Query 009133
Match_columns 542
No_of_seqs 351 out of 2241
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 20:49:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 3.8E-79 8.2E-84 640.3 35.2 356 157-514 1-373 (377)
2 KOG0372 Serine/threonine speci 100.0 2.6E-77 5.5E-82 582.5 18.1 271 189-509 15-286 (303)
3 KOG0376 Serine-threonine phosp 100.0 7.3E-75 1.6E-79 611.1 17.3 429 32-522 41-475 (476)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.8E-73 1E-77 585.4 29.5 309 150-514 1-310 (316)
5 cd07420 MPP_RdgC Drosophila me 100.0 2.1E-72 4.6E-77 580.6 31.0 293 163-507 2-321 (321)
6 KOG0377 Protein serine/threoni 100.0 1.1E-70 2.4E-75 568.2 15.2 309 144-508 99-431 (631)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 6.2E-68 1.3E-72 540.7 27.7 270 189-508 14-283 (285)
8 PTZ00239 serine/threonine prot 100.0 1.2E-67 2.6E-72 542.3 28.5 285 168-510 3-288 (303)
9 cd07416 MPP_PP2B PP2B, metallo 100.0 1.2E-67 2.7E-72 543.2 28.5 287 169-513 4-302 (305)
10 PTZ00480 serine/threonine-prot 100.0 2.9E-67 6.3E-72 541.9 28.0 269 189-508 31-300 (320)
11 KOG0373 Serine/threonine speci 100.0 5.4E-68 1.2E-72 510.4 17.7 273 187-508 16-288 (306)
12 PTZ00244 serine/threonine-prot 100.0 1.5E-66 3.3E-71 532.3 27.0 271 187-508 22-293 (294)
13 KOG0374 Serine/threonine speci 100.0 5.1E-67 1.1E-71 541.9 23.8 271 188-508 30-302 (331)
14 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 5.8E-66 1.3E-70 528.1 25.9 269 188-507 21-290 (293)
15 smart00156 PP2Ac Protein phosp 100.0 1.9E-65 4E-70 519.4 26.7 267 191-508 2-269 (271)
16 KOG0375 Serine-threonine phosp 100.0 7.6E-67 1.7E-71 529.7 14.9 280 189-514 60-348 (517)
17 cd07419 MPP_Bsu1_C Arabidopsis 100.0 5E-63 1.1E-67 510.5 28.4 280 183-507 14-310 (311)
18 KOG0371 Serine/threonine prote 100.0 2.8E-63 6.1E-68 486.9 13.5 283 165-510 21-304 (319)
19 cd00144 MPP_PPP_family phospho 100.0 3.8E-32 8.3E-37 264.7 19.4 217 224-492 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 4.3E-24 9.4E-29 213.8 15.2 126 221-349 1-145 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 2.1E-22 4.6E-27 197.2 13.5 180 224-475 1-196 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1.2E-21 2.6E-26 194.5 15.9 123 221-348 1-141 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 3E-21 6.4E-26 190.8 15.4 118 224-347 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 6.3E-21 1.4E-25 194.4 14.3 122 221-350 1-127 (275)
25 cd07422 MPP_ApaH Escherichia c 99.8 3.8E-21 8.3E-26 194.2 11.1 120 223-350 1-125 (257)
26 PRK11439 pphA serine/threonine 99.8 7.3E-21 1.6E-25 187.3 12.3 127 214-347 10-146 (218)
27 TIGR00668 apaH bis(5'-nucleosy 99.8 7.3E-21 1.6E-25 193.5 12.2 121 221-350 1-127 (279)
28 cd07421 MPP_Rhilphs Rhilph pho 99.8 2.1E-20 4.6E-25 190.9 13.6 74 222-296 3-82 (304)
29 PHA02239 putative protein phos 99.8 2.3E-20 5E-25 186.3 12.6 125 221-348 1-167 (235)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.8 5.7E-20 1.2E-24 179.1 13.3 121 221-348 1-131 (207)
31 PRK09968 serine/threonine-spec 99.8 8.1E-19 1.8E-23 173.1 11.4 129 212-347 6-144 (218)
32 KOG0376 Serine-threonine phosp 99.5 4.7E-16 1E-20 165.8 -1.3 338 186-531 11-359 (476)
33 PF08321 PPP5: PPP5 TPR repeat 99.5 4.2E-14 9.2E-19 122.8 9.0 92 103-215 2-95 (95)
34 PF00149 Metallophos: Calcineu 99.2 7.1E-11 1.5E-15 104.0 9.7 78 222-300 2-84 (200)
35 cd00841 MPP_YfcE Escherichia c 98.9 1.2E-07 2.6E-12 87.6 16.5 60 222-295 1-60 (155)
36 COG0639 ApaH Diadenosine tetra 98.8 1.3E-08 2.8E-13 90.4 6.3 145 296-479 3-154 (155)
37 PRK09453 phosphodiesterase; Pr 98.7 4.2E-08 9.2E-13 93.7 9.4 69 221-295 1-77 (182)
38 PF12850 Metallophos_2: Calcin 98.7 1.8E-07 4E-12 85.2 12.4 61 221-295 1-61 (156)
39 TIGR00040 yfcE phosphoesterase 98.6 1.1E-06 2.4E-11 81.9 15.3 64 221-294 1-64 (158)
40 cd07379 MPP_239FB Homo sapiens 98.4 4.8E-06 1E-10 75.6 12.3 61 222-294 1-63 (135)
41 cd07397 MPP_DevT Myxococcus xa 98.3 1.3E-06 2.9E-11 87.8 8.3 112 222-348 2-159 (238)
42 cd00838 MPP_superfamily metall 98.3 4.6E-06 1E-10 72.0 10.0 67 224-292 1-69 (131)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.2 2.6E-05 5.6E-10 73.3 13.5 65 223-295 1-66 (188)
44 cd07388 MPP_Tt1561 Thermus the 98.1 7.5E-06 1.6E-10 81.8 7.7 71 221-294 5-75 (224)
45 cd07394 MPP_Vps29 Homo sapiens 97.9 0.00042 9.1E-09 66.7 15.8 59 222-294 1-65 (178)
46 PRK05340 UDP-2,3-diacylglucosa 97.9 7.5E-05 1.6E-09 74.6 9.8 71 221-295 1-84 (241)
47 TIGR01854 lipid_A_lpxH UDP-2,3 97.8 7.8E-05 1.7E-09 74.1 9.0 67 224-294 2-81 (231)
48 COG0622 Predicted phosphoester 97.8 0.00087 1.9E-08 64.5 15.0 65 221-295 2-66 (172)
49 cd07404 MPP_MS158 Microscilla 97.7 3.5E-05 7.6E-10 72.1 4.3 68 223-294 1-68 (166)
50 cd07399 MPP_YvnB Bacillus subt 97.7 0.0021 4.6E-08 63.3 16.7 69 222-293 2-81 (214)
51 cd07385 MPP_YkuE_C Bacillus su 97.6 0.0001 2.2E-09 71.8 6.7 71 221-295 2-77 (223)
52 cd07403 MPP_TTHA0053 Thermus t 97.6 0.00037 8E-09 63.4 9.7 55 225-292 2-56 (129)
53 cd07400 MPP_YydB Bacillus subt 97.6 0.00051 1.1E-08 62.4 10.7 42 251-293 37-80 (144)
54 PRK11340 phosphodiesterase Yae 97.6 0.00027 5.8E-09 72.1 8.7 71 220-294 49-125 (271)
55 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.00089 1.9E-08 63.4 8.4 68 223-295 1-83 (168)
56 TIGR03729 acc_ester putative p 97.2 0.00067 1.5E-08 67.6 7.0 68 222-294 1-74 (239)
57 cd07391 MPP_PF1019 Pyrococcus 97.2 0.0011 2.4E-08 62.9 7.5 45 251-295 43-89 (172)
58 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.1 0.00079 1.7E-08 68.9 5.9 72 223-295 1-87 (262)
59 cd00840 MPP_Mre11_N Mre11 nucl 97.1 0.00091 2E-08 64.6 6.1 74 222-297 1-92 (223)
60 cd07396 MPP_Nbla03831 Homo sap 97.0 0.0016 3.4E-08 66.2 7.6 70 222-296 2-88 (267)
61 cd07398 MPP_YbbF-LpxH Escheric 97.0 0.0016 3.5E-08 63.0 7.4 23 419-441 177-199 (217)
62 TIGR00619 sbcd exonuclease Sbc 97.0 0.0016 3.5E-08 66.0 7.2 73 221-295 1-89 (253)
63 PRK04036 DNA polymerase II sma 97.0 0.0033 7.1E-08 70.0 10.1 117 219-346 242-388 (504)
64 PHA02546 47 endonuclease subun 97.0 0.0012 2.6E-08 69.7 6.1 73 221-295 1-90 (340)
65 PRK11148 cyclic 3',5'-adenosin 96.8 0.0032 7E-08 64.1 7.9 72 221-294 15-98 (275)
66 cd07402 MPP_GpdQ Enterobacter 96.8 0.0037 7.9E-08 61.5 7.9 70 222-294 1-83 (240)
67 PRK10966 exonuclease subunit S 96.5 0.0052 1.1E-07 66.6 7.0 85 221-311 1-101 (407)
68 cd07393 MPP_DR1119 Deinococcus 96.4 0.0097 2.1E-07 59.3 7.5 69 223-293 1-83 (232)
69 cd07383 MPP_Dcr2 Saccharomyces 96.3 0.0085 1.8E-07 57.9 6.4 71 221-292 3-87 (199)
70 cd07386 MPP_DNA_pol_II_small_a 96.3 0.022 4.8E-07 56.9 9.6 70 224-295 2-95 (243)
71 cd08165 MPP_MPPE1 human MPPE1 96.2 0.0074 1.6E-07 56.8 5.2 45 251-295 40-90 (156)
72 COG2129 Predicted phosphoester 96.2 0.17 3.8E-06 50.7 14.8 217 220-506 3-224 (226)
73 TIGR00024 SbcD_rel_arch putati 96.2 0.015 3.3E-07 58.2 7.5 70 221-295 15-103 (225)
74 TIGR00583 mre11 DNA repair pro 96.1 0.014 3E-07 63.4 7.6 56 219-276 2-69 (405)
75 KOG0918 Selenium-binding prote 96.1 0.00054 1.2E-08 72.9 -3.2 218 248-514 46-268 (476)
76 cd07380 MPP_CWF19_N Schizosacc 96.1 0.015 3.3E-07 54.8 6.6 68 224-292 1-68 (150)
77 cd08163 MPP_Cdc1 Saccharomyces 96.0 0.38 8.3E-06 49.1 17.1 23 418-440 203-225 (257)
78 cd07395 MPP_CSTP1 Homo sapiens 95.8 0.034 7.3E-07 55.9 8.1 74 221-294 5-99 (262)
79 cd00839 MPP_PAPs purple acid p 95.7 0.027 5.8E-07 57.3 7.1 70 221-296 5-83 (294)
80 COG1409 Icc Predicted phosphoh 95.4 0.054 1.2E-06 54.0 7.9 73 222-297 2-81 (301)
81 cd07401 MPP_TMEM62_N Homo sapi 95.1 0.054 1.2E-06 54.9 6.8 71 223-295 2-90 (256)
82 cd00845 MPP_UshA_N_like Escher 95.0 0.04 8.6E-07 54.9 5.7 67 222-294 2-82 (252)
83 COG2908 Uncharacterized protei 94.9 0.086 1.9E-06 53.3 7.7 101 225-349 2-118 (237)
84 cd07384 MPP_Cdc1_like Saccharo 94.9 0.039 8.4E-07 52.8 4.9 45 251-295 47-101 (171)
85 cd08166 MPP_Cdc1_like_1 unchar 94.6 0.05 1.1E-06 53.5 5.1 44 251-294 44-93 (195)
86 COG1407 Predicted ICC-like pho 94.1 0.11 2.3E-06 52.6 6.2 71 221-295 20-111 (235)
87 cd08164 MPP_Ted1 Saccharomyces 93.8 0.11 2.3E-06 51.2 5.6 67 228-295 24-112 (193)
88 COG1408 Predicted phosphohydro 93.1 0.23 4.9E-06 51.6 6.8 72 220-295 44-119 (284)
89 KOG3662 Cell division control 92.1 0.33 7.2E-06 52.7 6.7 57 236-293 81-143 (410)
90 cd07410 MPP_CpdB_N Escherichia 91.9 0.28 6.1E-06 49.9 5.7 42 222-264 2-59 (277)
91 PF14582 Metallophos_3: Metall 91.4 0.28 6E-06 49.6 4.8 73 221-295 6-103 (255)
92 COG4186 Predicted phosphoester 91.4 0.37 8E-06 46.1 5.4 46 249-298 45-90 (186)
93 COG0420 SbcD DNA repair exonuc 91.2 0.49 1.1E-05 50.7 6.9 75 221-297 1-91 (390)
94 PLN02533 probable purple acid 91.0 0.34 7.3E-06 53.1 5.4 70 221-295 140-212 (427)
95 cd07412 MPP_YhcR_N Bacillus su 90.5 0.37 8E-06 49.8 4.9 67 222-294 2-88 (288)
96 cd07378 MPP_ACP5 Homo sapiens 89.4 0.59 1.3E-05 47.2 5.3 71 222-294 2-83 (277)
97 cd07411 MPP_SoxB_N Thermus the 88.6 0.86 1.9E-05 46.2 5.9 66 223-294 3-95 (264)
98 cd07408 MPP_SA0022_N Staphyloc 88.3 0.64 1.4E-05 47.0 4.7 65 222-293 2-81 (257)
99 KOG3325 Membrane coat complex 87.9 5.5 0.00012 38.0 10.1 62 223-294 3-66 (183)
100 COG1311 HYS2 Archaeal DNA poly 86.8 4 8.6E-05 45.3 9.9 77 221-297 226-324 (481)
101 cd07409 MPP_CD73_N CD73 ecto-5 83.5 2.5 5.4E-05 43.4 6.2 67 222-294 2-94 (281)
102 KOG2476 Uncharacterized conser 82.5 3.4 7.4E-05 45.5 7.0 69 221-291 6-75 (528)
103 PF06874 FBPase_2: Firmicute f 81.1 1.9 4.2E-05 49.1 4.7 42 252-298 187-228 (640)
104 KOG2863 RNA lariat debranching 80.1 3.8 8.1E-05 44.1 6.1 74 221-295 1-89 (456)
105 TIGR00282 metallophosphoestera 79.2 4 8.8E-05 42.1 6.0 69 221-295 1-72 (266)
106 cd00842 MPP_ASMase acid sphing 79.1 4.7 0.0001 41.3 6.4 48 250-297 69-125 (296)
107 PRK09419 bifunctional 2',3'-cy 77.9 3.2 6.9E-05 51.1 5.6 67 221-293 661-735 (1163)
108 cd07407 MPP_YHR202W_N Saccharo 76.7 3.2 6.9E-05 43.0 4.4 68 222-294 7-97 (282)
109 COG1768 Predicted phosphohydro 75.6 5.9 0.00013 39.0 5.5 44 248-295 42-87 (230)
110 PRK09983 pflD putative formate 73.0 4.4 9.5E-05 47.8 4.8 116 55-175 183-300 (765)
111 cd01677 PFL2_DhaB_BssA Pyruvat 72.4 4.4 9.6E-05 47.9 4.7 115 57-175 192-308 (781)
112 cd07406 MPP_CG11883_N Drosophi 72.0 7.2 0.00016 39.5 5.6 57 231-293 21-82 (257)
113 PF04042 DNA_pol_E_B: DNA poly 65.6 16 0.00034 35.4 6.3 73 223-296 1-93 (209)
114 cd07382 MPP_DR1281 Deinococcus 63.4 17 0.00037 37.3 6.2 68 222-295 1-71 (255)
115 PRK09420 cpdB bifunctional 2', 63.4 11 0.00023 43.8 5.3 66 222-293 27-121 (649)
116 TIGR01774 PFL2-3 pyruvate form 62.6 9.6 0.00021 45.1 4.8 114 58-175 195-310 (786)
117 COG0737 UshA 5'-nucleotidase/2 61.3 11 0.00023 42.2 4.7 68 222-295 28-116 (517)
118 cd07405 MPP_UshA_N Escherichia 60.9 22 0.00047 36.7 6.6 40 222-261 2-54 (285)
119 cd08162 MPP_PhoA_N Synechococc 60.0 14 0.00031 38.7 5.2 65 223-293 3-90 (313)
120 TIGR01390 CycNucDiestase 2',3' 59.1 14 0.00029 42.7 5.1 66 222-293 4-98 (626)
121 COG3855 Fbp Uncharacterized pr 58.2 8.2 0.00018 42.8 3.0 41 252-297 193-233 (648)
122 cd07387 MPP_PolD2_C PolD2 (DNA 56.5 2.4E+02 0.0053 29.0 18.7 34 466-506 224-257 (257)
123 PRK09419 bifunctional 2',3'-cy 53.0 17 0.00038 44.8 5.0 42 222-264 43-100 (1163)
124 PTZ00235 DNA polymerase epsilo 52.1 42 0.00091 35.3 6.8 74 219-293 26-121 (291)
125 PF06874 FBPase_2: Firmicute f 51.9 55 0.0012 37.8 8.2 61 419-495 507-574 (640)
126 KOG1432 Predicted DNA repair e 51.6 22 0.00047 38.2 4.7 45 250-295 101-148 (379)
127 PRK11907 bifunctional 2',3'-cy 51.4 22 0.00048 42.3 5.3 66 222-293 117-212 (814)
128 TIGR01530 nadN NAD pyrophospha 51.1 23 0.00049 40.2 5.2 40 250-294 50-94 (550)
129 PF02901 PFL: Pyruvate formate 49.4 12 0.00026 43.4 2.6 114 57-175 195-311 (648)
130 PRK09558 ushA bifunctional UDP 46.8 26 0.00055 39.6 4.7 41 222-262 36-89 (551)
131 KOG1378 Purple acid phosphatas 42.5 37 0.00081 37.7 5.0 20 422-441 323-342 (452)
132 KOG3947 Phosphoesterases [Gene 40.2 24 0.00052 36.9 2.9 67 219-295 60-127 (305)
133 KOG3339 Predicted glycosyltran 37.0 91 0.002 31.0 6.1 87 251-346 40-143 (211)
134 PTZ00422 glideosome-associated 37.0 55 0.0012 35.9 5.2 73 221-294 27-109 (394)
135 PRK09418 bifunctional 2',3'-cy 36.6 54 0.0012 39.0 5.4 42 222-264 41-98 (780)
136 KOG2679 Purple (tartrate-resis 34.7 42 0.00091 35.2 3.6 85 207-295 29-127 (336)
137 PF02875 Mur_ligase_C: Mur lig 25.3 2E+02 0.0044 23.9 5.8 70 222-291 13-82 (91)
138 COG3855 Fbp Uncharacterized pr 21.1 3.1E+02 0.0068 31.0 7.4 41 420-472 515-559 (648)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=3.8e-79 Score=640.30 Aligned_cols=356 Identities=52% Similarity=0.974 Sum_probs=318.3
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCC-CCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHH
Q 009133 157 WPRNGRISLEWIQLLISTFKWSSWK-DPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHD 235 (542)
Q Consensus 157 ~p~~~~it~~~i~~l~~~~~~~~~~-~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~d 235 (542)
||..+.+|.+|++.||+.|++..++ .++++...++.+++.+||.+|+++|++||++++|+++...+++||||||||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~d 80 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHD 80 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHH
Confidence 8988999999999999999998776 578888999999999999999999999999999987666799999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccch
Q 009133 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDC 315 (542)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~ 315 (542)
|.++|+ ..|+++.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+.. +
T Consensus 81 L~~ll~-~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~ 158 (377)
T cd07418 81 VLFLLE-DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-G 158 (377)
T ss_pred HHHHHH-HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-H
Confidence 999999 99998877779999999999999999999999999999999999999999999999999999999999875 5
Q ss_pred hhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCccccccccccc------ccccCCCCCHHHHHhhhccccCCCC
Q 009133 316 KLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQ------KLDTLSLGSLREFAKVNRFLEDVPE 389 (542)
Q Consensus 316 ~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~------~~~~l~l~sLddI~~i~R~~~~p~~ 389 (542)
..+|+.++++|++||+++++++++|||||||++.+.+....+..+++.. ......+.++++|++++|+..+|+.
T Consensus 159 ~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~ 238 (377)
T cd07418 159 KHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPG 238 (377)
T ss_pred HHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCC
Confidence 6799999999999999999999999999999876543221111111111 1123467899999999998767764
Q ss_pred cc---ccccccccCCCCCCCccccc-CCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCC
Q 009133 390 ND---LLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV 465 (542)
Q Consensus 390 ~~---l~~DLLWSDP~~~~g~~~n~-RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~ 465 (542)
.+ +++|+|||||....|+.+|. ||.|++||++++++||++|++++||||||++|++++|.|++++++||++.|+.+
T Consensus 239 ~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~ 318 (377)
T cd07418 239 EGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVE 318 (377)
T ss_pred CCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCC
Confidence 44 57899999999989999885 999999999999999999999999999999999999999999999999988656
Q ss_pred CCeEEEEecCCCCCCC----CCCCCceEEEEEeCCCCCCCeEEEecC--CCCCCC
Q 009133 466 SGELYTLFTAPNYPQV----DGFDNVGAYAVLKPPLFDSPLFLQLKA--AEKPEV 514 (542)
Q Consensus 466 ~gkliTVFSApnY~~~----~~~~N~gA~l~l~~~~~~~p~f~~f~~--~~p~~~ 514 (542)
+|+|||||||||||++ +.++|+||+++++++.+.+|+|+||++ |||+..
T Consensus 319 ~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (377)
T cd07418 319 SGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKAN 373 (377)
T ss_pred CCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCC
Confidence 7999999999999954 368999999999998878999999999 999987
No 2
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-77 Score=582.53 Aligned_cols=271 Identities=37% Similarity=0.627 Sum_probs=257.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHH
Q 009133 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (542)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (542)
.+++.++..||.+++++|.+|||+..++ .|++|||||||||+||+.+|+ ..|.+++++ |+|||||||||.+|+|
T Consensus 15 li~E~eV~~LC~~~~eiL~~E~NV~~i~----tPvtvcGDIHGQf~Dllelf~-igG~~~~t~-YLFLGDyVDRG~~SvE 88 (303)
T KOG0372|consen 15 LIAESEVKALCAKVREILVEESNVQRID----TPVTVCGDIHGQFYDLLELFR-IGGDVPETN-YLFLGDYVDRGYYSVE 88 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCceecC----CCcEEeecccchHHHHHHHHH-hCCCCCCCc-eEeecchhccccchHH
Confidence 5788999999999999999999999997 689999999999999999999 888888777 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCC
Q 009133 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (542)
Q Consensus 269 vL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~ 348 (542)
++++|++||++||++|+|||||||++.+++.|||++||.+|||.. .+|+.+++.|+.||++|+|++++||||||+||
T Consensus 89 t~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~---~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP 165 (303)
T KOG0372|consen 89 TFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA---NVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSP 165 (303)
T ss_pred HHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh---HHHHHHHHHHHhhhHhheecCcEEEEcCCCCc
Confidence 999999999999999999999999999999999999999999976 89999999999999999999999999999998
Q ss_pred CcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHh
Q 009133 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 428 (542)
Q Consensus 349 ~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~ 428 (542)
+ +.++|+|+.++|.. +.|..+.++|+|||||.+.+||..|+||+|++||.|+++.||+
T Consensus 166 ~---------------------i~~lDqIr~lDR~~-Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~ 223 (303)
T KOG0372|consen 166 S---------------------IQTLDQIRVLDRKQ-EVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLE 223 (303)
T ss_pred c---------------------hhhHHHHHHhhccc-cCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHH
Confidence 4 57999999999986 5667899999999999999999999999999999999999999
Q ss_pred HcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC
Q 009133 429 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA 508 (542)
Q Consensus 429 ~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~ 508 (542)
.||+.+|+|+||- +++||++.++ ++++||||||||| .+.+|.||+|.|+.+ ....|..|+|
T Consensus 224 ~N~~~~I~RaHQL------------v~eGyk~~F~---~~v~TVWSAPNYC--YrCGN~AsIl~lde~--~~~~F~vFea 284 (303)
T KOG0372|consen 224 ANGLSLICRAHQL------------VMEGYKWHFD---EKVVTVWSAPNYC--YRCGNVAAILELDED--LDKDFRVFEA 284 (303)
T ss_pred hCChHHHHHHHHH------------HHhhHHHhcC---CceEEEecCCchh--hhcCChHHheeeccc--cCcceEeeec
Confidence 9999999999994 7999999774 9999999999999 589999999999987 4789999999
Q ss_pred -C
Q 009133 509 -A 509 (542)
Q Consensus 509 -~ 509 (542)
|
T Consensus 285 a~ 286 (303)
T KOG0372|consen 285 AP 286 (303)
T ss_pred ch
Confidence 5
No 3
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.3e-75 Score=611.11 Aligned_cols=429 Identities=30% Similarity=0.524 Sum_probs=390.2
Q ss_pred hhhHHHHHHHHHhccccCCcccccchhhHHHHHHHhhh-hhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh
Q 009133 32 ENLRRVFMIFEIAGGVVNGRTKQVTEADAEQLWCSSVD-GVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS 110 (542)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~ 110 (542)
.+.|++.+++....|.+..+..+..|.|.+.+.||+-+ ..|.+..+-++-++-.++.....++++.++++.+ ||.+++
T Consensus 41 ~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~-Ec~~~v 119 (476)
T KOG0376|consen 41 FANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKID-ECNKIV 119 (476)
T ss_pred echhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHH-HHHHHH
Confidence 46789999999999999999999999999999999999 6667888999999999999999999999999875 799999
Q ss_pred hhhhhhHHhhhhhhhhhhhccchhhhh-ccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccC
Q 009133 111 KQRVFDSSLQGLLEELQVEVGSTMRER-LVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNV 189 (542)
Q Consensus 111 k~~~fe~ai~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~ 189 (542)
++++||+||.....+ ..+..+. +..++...+...+.||.+ +..++|.+|+..+|+.++.+++
T Consensus 120 s~~~fe~ai~~~~~d-----~~s~~~~~~~~~~~~~i~~~y~g~~l---e~~kvt~e~vk~~~~~~~~~~~--------- 182 (476)
T KOG0376|consen 120 SEEKFEKAILTPEGD-----KKSVVEMKIDEEDMDLIESDYSGPVL---EDHKVTLEFVKTLMEVFKNQKK--------- 182 (476)
T ss_pred HHHhhhhcccCCccC-----CccccccccccccccccccccCCccc---ccchhhHHHHHHHHHhhhcccc---------
Confidence 999999999984322 1222222 333333334455688888 5669999999999998887653
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHH
Q 009133 190 MPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV 269 (542)
Q Consensus 190 l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv 269 (542)
++..++.+|+..+..+++++|++++++.+.+..+.||||+||||+++.++|. +.|.|+.+++|+|+|||||||++|+|+
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~-l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHh-hcCCCCCcccccccCceeeecccceee
Confidence 6678889999999999999999999999989999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCC
Q 009133 270 LLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRR 349 (542)
Q Consensus 270 L~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~ 349 (542)
+..+++.|+.+|+++|++|||||+..||+.|||.+++..+|+.. .+..+.++|.+||++.+|+++++.+|||+++.
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~----~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~ 337 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEE----MFNLFSEVFIWLPLAHLINNKVLVMHGGLFSP 337 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHH----HHHhhhhhhccccchhhhcCceEEEecCcCCC
Confidence 99999999999999999999999999999999999999999886 88888899999999999999999999999876
Q ss_pred cCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHhH
Q 009133 350 TCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKE 429 (542)
Q Consensus 350 ~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~~ 429 (542)
.+ .+++|++++.|+ ..||+.+.++++|||||+..+|+.+|+||.|+.||+|++++||+.
T Consensus 338 ~~--------------------v~l~d~r~i~r~-~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~ 396 (476)
T KOG0376|consen 338 DG--------------------VTLEDFRNIDRF-EQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQD 396 (476)
T ss_pred CC--------------------ccHHHHHhhhhc-cCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhh
Confidence 43 589999999999 477899999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC-
Q 009133 430 NHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA- 508 (542)
Q Consensus 430 n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~- 508 (542)
|++++||||||++ ..||++.|+ |+|+||||||||| ++++|+||++.+++++ .+|.|.+|++
T Consensus 397 n~l~~i~rshe~~------------d~gy~~eh~---g~l~tvfsapnyc--d~~~n~ga~i~~~~~~-~~p~~~~~e~v 458 (476)
T KOG0376|consen 397 NNLDKIIRSHEVK------------DEGYEVEHS---GKLITVFSAPNYC--DQMGNKGAFIHLEPDD-LTPNFYTFEAV 458 (476)
T ss_pred cchHHHhhccccC------------CCceeeecC---CcEEEEecCcchh--hhcCCcceEEEecCCC-CccceeecccC
Confidence 9999999999985 589999994 9999999999999 6899999999999876 6999999999
Q ss_pred CCCCCC---CCcccccc
Q 009133 509 AEKPEV---WNFDVFYF 522 (542)
Q Consensus 509 ~~p~~~---y~~~~~~~ 522 (542)
|||+++ |++++++|
T Consensus 459 p~~~~~~ma~~ns~~~~ 475 (476)
T KOG0376|consen 459 PHPDVKPMAYANSLLQW 475 (476)
T ss_pred CCCCCCCcccccccccC
Confidence 999999 99999875
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.8e-73 Score=585.40 Aligned_cols=309 Identities=36% Similarity=0.639 Sum_probs=284.1
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecC
Q 009133 150 QDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDI 229 (542)
Q Consensus 150 ~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDI 229 (542)
+.||++.|| ++|.++++.+++.++... .|+.+++.+||.+|.++|++||++++++.|..++++|||||
T Consensus 1 ~~~~~~~~~---~i~~~~~~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDI 68 (316)
T cd07417 1 YDGPRLEDE---KVTLEFVKEMIEWFKDQK---------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDT 68 (316)
T ss_pred CCCcccCCC---CCCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecc
Confidence 367999766 799999999999998643 47889999999999999999999999987656789999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHH
Q 009133 230 LGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTK 309 (542)
Q Consensus 230 HG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~k 309 (542)
||||.+|.++|+ ..|+|+.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+
T Consensus 69 HG~~~dL~~ll~-~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k 147 (316)
T cd07417 69 HGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAK 147 (316)
T ss_pred cCCHHHHHHHHH-hcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhc
Confidence 999999999999 9999887777999999999999999999999999999999999999999999999999999999999
Q ss_pred hCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCC
Q 009133 310 FGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPE 389 (542)
Q Consensus 310 y~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~ 389 (542)
|+.. +|+.+.++|++||+++++++++|||||||++. ...+++++.++.|+. +++.
T Consensus 148 ~~~~----l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------~~~~l~~i~~i~r~~-~~~~ 202 (316)
T cd07417 148 YNEQ----MFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------DGVTLDDIRKIDRFR-QPPD 202 (316)
T ss_pred ccHH----HHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------CCccHHHhhcccCCC-CCCc
Confidence 9764 99999999999999999999999999999642 346899999999985 5667
Q ss_pred ccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeE
Q 009133 390 NDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGEL 469 (542)
Q Consensus 390 ~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkl 469 (542)
+++++|+|||||....++.+|.||.|+.||++++++||++||+++||||||+ +++||++.|+ |+|
T Consensus 203 ~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~---~~~ 267 (316)
T cd07417 203 SGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYEVEHD---GKC 267 (316)
T ss_pred cccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEEEecC---CeE
Confidence 8899999999999989999999999999999999999999999999999997 5899999874 999
Q ss_pred EEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC-CCCCCC
Q 009133 470 YTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEV 514 (542)
Q Consensus 470 iTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~~ 514 (542)
+||||||||| +.++|+||++.+++++ .+++|++|++ |||...
T Consensus 268 ~TvfSa~~Y~--~~~~N~ga~~~i~~~~-~~~~~~~~~~~~~~~~~ 310 (316)
T cd07417 268 ITVFSAPNYC--DQMGNKGAFIRITGSD-LKPKFTQFEAVPHPNVK 310 (316)
T ss_pred EEEeCCcccc--CCCCcceEEEEEeCCC-ceeeeEeccCCCCCCCC
Confidence 9999999999 5789999999999844 4899999999 999877
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.1e-72 Score=580.60 Aligned_cols=293 Identities=33% Similarity=0.582 Sum_probs=262.8
Q ss_pred CCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHH
Q 009133 163 ISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEE 242 (542)
Q Consensus 163 it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~ 242 (542)
+|.+.++.+++.+.... .|+.+++.+||.+|+++|++||++++|+.+..++++|||||||||++|.++|+
T Consensus 2 ~~~~~~~~~i~~~~~~~---------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~- 71 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ---------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFY- 71 (321)
T ss_pred CCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHH-
Confidence 78999999999987533 48889999999999999999999999987666799999999999999999999
Q ss_pred hcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhh
Q 009133 243 NAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKC 322 (542)
Q Consensus 243 ~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~ 322 (542)
..|+|+.+++|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||+.||..+|+.. +..+|+.+
T Consensus 72 ~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~~ 150 (321)
T cd07420 72 KNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRLL 150 (321)
T ss_pred HcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHHH
Confidence 99998777779999999999999999999999999999999999999999999999999999999999864 56799999
Q ss_pred hhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhcccc----CCCC---------
Q 009133 323 LECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLE----DVPE--------- 389 (542)
Q Consensus 323 ~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~----~p~~--------- 389 (542)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .||.
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~ 208 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------TDLDLLDKIDRHKYVSVLRPPLRKGMEELTG 208 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------cCHHHHHhhhccccccccCCCcccccccccc
Confidence 999999999999999999999999852 37888888887421 1111
Q ss_pred -------------ccccccccccCCCCCCCcccc-cCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCccccc
Q 009133 390 -------------NDLLSDVLWSDPSSEAGLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 455 (542)
Q Consensus 390 -------------~~l~~DLLWSDP~~~~g~~~n-~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~ 455 (542)
..++.|+|||||....++.++ .||.|++||++++++||++|++++||||||+ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~------------v~ 276 (321)
T cd07420 209 EEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC------------KP 276 (321)
T ss_pred ccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hh
Confidence 247889999999987775555 5999999999999999999999999999997 58
Q ss_pred CCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEec
Q 009133 456 NGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLK 507 (542)
Q Consensus 456 ~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~ 507 (542)
+||++.|+ |+|+||||||||| +.++|+||++.++++ .+|+|++|+
T Consensus 277 ~G~~~~~~---~~~iTvFSa~nY~--~~~~N~gavl~i~~~--~~~~f~~~~ 321 (321)
T cd07420 277 EGYEFCHN---NKVITIFSASNYY--EEGSNRGAYIKLGPD--LTPHFVQYQ 321 (321)
T ss_pred cceEEecC---CeEEEEecCCccC--CCCCccEEEEEECCC--CceeEEEeC
Confidence 99999884 9999999999999 468999999999875 589999985
No 6
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-70 Score=568.20 Aligned_cols=309 Identities=34% Similarity=0.560 Sum_probs=283.5
Q ss_pred ccccCC--CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCC
Q 009133 144 ENLTKE--QDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDS 221 (542)
Q Consensus 144 ~~~~~~--~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~ 221 (542)
++++++ +.||.+++| ++..++..|+++|+..+ +|+++||+.|+.+|+++|++.||+-+|+++.+.
T Consensus 99 ~sidv~d~y~Gp~ls~P----l~~~~i~~lieaFk~kq---------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~ 165 (631)
T KOG0377|consen 99 TSIDVPDSYNGPKLSLP----LRKNHIDLLIEAFKKKQ---------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQ 165 (631)
T ss_pred cceecCccCCCcccccC----cCchHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHHHhCCCCCcccccccc
Confidence 445444 599999999 88999999999998653 699999999999999999999999999998889
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccC
Q 009133 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYG 301 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yG 301 (542)
.|+||||+||.++||.-||. ++|+|+..++|||+|||||||..|+|||+.|+++-+.||+.+||.|||||+.+||-.||
T Consensus 166 qVTiCGDLHGklDDL~~I~y-KNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYG 244 (631)
T KOG0377|consen 166 QVTICGDLHGKLDDLLVILY-KNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYG 244 (631)
T ss_pred ceEEeccccccccceEEEEe-cCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHh
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhh
Q 009133 302 FWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVN 381 (542)
Q Consensus 302 F~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~ 381 (542)
|.+|+..||... ++.+.+.+.++|+|||++++|+.+||+||||+|.+. +++-|.++.
T Consensus 245 F~kEv~~KYk~~-~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~T----------------------dl~ll~kIe 301 (631)
T KOG0377|consen 245 FIKEVESKYKRH-GKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDST----------------------DLDLLDKIE 301 (631)
T ss_pred HHHHHHHHhhhc-ccHHHHHHHHHHHhcchhhhcccceEEEecCcccch----------------------hHHHHhhhh
Confidence 999999999987 889999999999999999999999999999998654 444444554
Q ss_pred ccc----cCCC-----------------CccccccccccCCCCCCCccccc-CCCeeeeChhhHHHHHhHcCCeEEEEec
Q 009133 382 RFL----EDVP-----------------ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSH 439 (542)
Q Consensus 382 R~~----~~p~-----------------~~~l~~DLLWSDP~~~~g~~~n~-RG~G~~FG~d~~~~FL~~n~l~lIIRgH 439 (542)
|.. +.|| ++..+.|++||||....|+.||. ||.|++||||+|.+||++++++++||||
T Consensus 302 R~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSH 381 (631)
T KOG0377|consen 302 RGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSH 381 (631)
T ss_pred ccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeec
Confidence 432 1111 56788999999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC
Q 009133 440 EGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA 508 (542)
Q Consensus 440 e~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~ 508 (542)
||+ ++||+++|+ ++|+|||||+||. ...+|+|||+.|.+. .+|+|+||.|
T Consensus 382 ECK------------peGyEf~Hd---~kvlTiFSASNYY--e~GSNrGAYikl~~~--~~PhfvQY~a 431 (631)
T KOG0377|consen 382 ECK------------PEGYEFCHD---NKVLTIFSASNYY--EIGSNRGAYIKLGNQ--LTPHFVQYQA 431 (631)
T ss_pred ccC------------CCcceeeeC---CeEEEEEeccchh--eecCCCceEEEeCCC--CCchHHHHHh
Confidence 995 899999996 9999999999998 568999999999877 5899999998
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=6.2e-68 Score=540.73 Aligned_cols=270 Identities=39% Similarity=0.678 Sum_probs=251.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHH
Q 009133 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (542)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (542)
.++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..++++.+. |||||||||||++|+|
T Consensus 14 ~l~~~~~~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~dL~~ll~-~~~~~~~~~-~lfLGDyVDRG~~s~e 87 (285)
T cd07415 14 LLPESEVKSLCEKAKEILVKESNVQRVR----SPVTVCGDIHGQFYDLLELFR-VGGDPPDTN-YLFLGDYVDRGYYSVE 87 (285)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEecC----CCEEEEEeCCCCHHHHHHHHH-HcCCCCCCe-EEEEeEECCCCcCHHH
Confidence 4788999999999999999999999996 589999999999999999999 888877655 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCC
Q 009133 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (542)
Q Consensus 269 vL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~ 348 (542)
++.+|+++|+.+|.++++||||||.+.++..|||..||..+|+.. .+|+.++++|++||++|++++++|||||||++
T Consensus 88 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~---~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p 164 (285)
T cd07415 88 TFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNA---NVWKYCTDLFDYLPLAALIDNQIFCVHGGLSP 164 (285)
T ss_pred HHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCch---HHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCC
Confidence 999999999999999999999999999999999999999999852 59999999999999999999999999999987
Q ss_pred CcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHh
Q 009133 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 428 (542)
Q Consensus 349 ~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~ 428 (542)
. +.++++|.++.|+. +++.++++.|+|||||....+|.+|+||.|++||++++++||+
T Consensus 165 ~---------------------~~~~~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~ 222 (285)
T cd07415 165 S---------------------IDTLDQIRAIDRFQ-EVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNH 222 (285)
T ss_pred C---------------------cccHHHhhcccCCC-CCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHH
Confidence 3 46899999999986 5556788999999999998999999999999999999999999
Q ss_pred HcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC
Q 009133 429 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA 508 (542)
Q Consensus 429 ~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~ 508 (542)
+||+++||||||+ +++||++.|+ |+|+||||||||| +.++|+||++.++.+ .+++|.+|++
T Consensus 223 ~n~l~~iiR~He~------------~~~G~~~~~~---~~~~TvfSa~~y~--~~~~n~~a~l~i~~~--~~~~~~~~~~ 283 (285)
T cd07415 223 NNGLTLICRAHQL------------VMEGYQWMFD---DKLVTVWSAPNYC--YRCGNVASIMELDEH--LKRSFKVFEA 283 (285)
T ss_pred HCCCeEEEEcCcc------------ccceEEEecC---CcEEEEecCCccc--CCCCceEEEEEECCC--CcEeEEEecc
Confidence 9999999999997 5899999874 9999999999999 578999999999876 4789999986
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.2e-67 Score=542.26 Aligned_cols=285 Identities=33% Similarity=0.566 Sum_probs=257.7
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCC
Q 009133 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (542)
Q Consensus 168 i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p 247 (542)
++.+++.+.... .++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~~L~~l~~-~~~~~ 68 (303)
T PTZ00239 3 IDRHIATLLNGG---------CLPERDLKLICERAKEIFLEESNVQPVR----APVNVCGDIHGQFYDLQALFK-EGGDI 68 (303)
T ss_pred HHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCeEecC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 345566655432 4788999999999999999999999996 679999999999999999999 88887
Q ss_pred CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhc
Q 009133 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (542)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (542)
+.+. |||||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. .+|+.++++|+
T Consensus 69 ~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f~ 144 (303)
T PTZ00239 69 PNAN-YIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVFD 144 (303)
T ss_pred CCce-EEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHHH
Confidence 6554 9999999999999999999999999999999999999999999999999999999999863 58999999999
Q ss_pred CCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCc
Q 009133 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (542)
Q Consensus 328 ~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~ 407 (542)
+||++|+|++++|||||||++. +.++++|+++.|+. ++|.++.++|+|||||....+|
T Consensus 145 ~LPlaaii~~~i~cvHgGi~p~---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~ 202 (303)
T PTZ00239 145 CLPLAALIEGQILCVHGGLSPD---------------------MRTIDQIRTIDRKI-EIPHEGPFCDLMWSDPEEVEYW 202 (303)
T ss_pred hCchheEEcCeEEEEcCccCcc---------------------cccHhhhccccCCC-CCCCCCCceeeEecCccccCCC
Confidence 9999999999999999999873 46899999999986 5567788999999999988899
Q ss_pred ccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCc
Q 009133 408 RENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNV 487 (542)
Q Consensus 408 ~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~ 487 (542)
.+|.||.|++||++++++||++||+++||||||+ +++||++.|+ +++||||||||||| +.++|+
T Consensus 203 ~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~--~~~~N~ 266 (303)
T PTZ00239 203 AVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYC--YRCGNI 266 (303)
T ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCccc--CCCCce
Confidence 9999999999999999999999999999999997 5899998763 46799999999999 578999
Q ss_pred eEEEEEeCCCCCCCeEEEecC-CC
Q 009133 488 GAYAVLKPPLFDSPLFLQLKA-AE 510 (542)
Q Consensus 488 gA~l~l~~~~~~~p~f~~f~~-~~ 510 (542)
||++.++++ .+++|.+|++ |+
T Consensus 267 ~ail~i~~~--~~~~~~~~~~~~~ 288 (303)
T PTZ00239 267 ASILCLDEN--LQQTWKTFKEVPE 288 (303)
T ss_pred EEEEEECCC--CcEeeEEeeCCCc
Confidence 999999986 4789999998 55
No 9
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.2e-67 Score=543.23 Aligned_cols=287 Identities=34% Similarity=0.581 Sum_probs=256.4
Q ss_pred HHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCC
Q 009133 169 QLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPS 248 (542)
Q Consensus 169 ~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~ 248 (542)
+-|++.|...+ .++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..+.|+
T Consensus 4 ~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~l~~i~----~~i~ViGDIHG~~~dL~~l~~-~~g~~~ 69 (305)
T cd07416 4 DVLKAHFMREG---------RLSEEDALRIITEGAEILRQEPNLLRIE----APVTVCGDIHGQFYDLLKLFE-VGGSPA 69 (305)
T ss_pred HHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHhCCCeEccC----CCEEEEEeCCCCHHHHHHHHH-hcCCCC
Confidence 45666666443 4788999999999999999999999997 689999999999999999999 888887
Q ss_pred CCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcC
Q 009133 249 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRT 328 (542)
Q Consensus 249 ~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~ 328 (542)
.+. |||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||..|+..+|+.. +|..++++|++
T Consensus 70 ~~~-ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~----l~~~~~~~f~~ 144 (305)
T cd07416 70 NTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDACMEAFDC 144 (305)
T ss_pred Cce-EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHH----HHHHHHHHHhh
Confidence 654 9999999999999999999999999999999999999999999999999999999999654 99999999999
Q ss_pred CCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCC---
Q 009133 329 LPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEA--- 405 (542)
Q Consensus 329 LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~--- 405 (542)
||+++++++++|||||||++. +.++++|.++.|+. +++..++++|+|||||....
T Consensus 145 LPlaaii~~~i~~vHGGi~p~---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~ 202 (305)
T cd07416 145 LPLAALMNQQFLCVHGGLSPE---------------------LKTLDDIRKLDRFR-EPPAFGPMCDLLWSDPLEDFGNE 202 (305)
T ss_pred ccceeEEcCCEEEEcCCCCcc---------------------cccHHHhcccCCCC-CCCCCCcceeeeecCcccccccc
Confidence 999999999999999999873 46899999999986 55677889999999997643
Q ss_pred ----Ccccc-cCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccC---CCCeEEEEecCCC
Q 009133 406 ----GLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDT---VSGELYTLFTAPN 477 (542)
Q Consensus 406 ----g~~~n-~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~---~~gkliTVFSApn 477 (542)
+|.+| .||.|++||++++++||++||+++||||||+ +++||++.|+. ..++|||||||||
T Consensus 203 ~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~~~~~~iTvFSa~~ 270 (305)
T cd07416 203 KTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAPN 270 (305)
T ss_pred cccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcCCCCcEEEEeCCcc
Confidence 47776 5999999999999999999999999999997 58999998752 1139999999999
Q ss_pred CCCCCCCCCceEEEEEeCCCCCCCeEEEecC-CCCCC
Q 009133 478 YPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPE 513 (542)
Q Consensus 478 Y~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~ 513 (542)
|| +.++|+||++.++++ ..+|.+|++ |||.+
T Consensus 271 Y~--~~~~N~~a~l~i~~~---~~~~~~~~~~~~~~~ 302 (305)
T cd07416 271 YL--DVYNNKAAVLKYENN---VMNIRQFNCSPHPYW 302 (305)
T ss_pred cc--CCCCceEEEEEEcCC---cceEEEecCCCCCCC
Confidence 99 578999999999876 369999999 99964
No 10
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.9e-67 Score=541.89 Aligned_cols=269 Identities=35% Similarity=0.649 Sum_probs=250.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHH
Q 009133 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (542)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (542)
.++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+|
T Consensus 31 ~l~~~~i~~l~~~~~~il~~ep~ll~i~----~~i~vvGDIHG~~~dL~~l~~-~~g~~~~~~-ylfLGDyVDRG~~s~e 104 (320)
T PTZ00480 31 NLTEAEVRGLCIKARDIFISQPILLELE----APLKICGDVHGQYFDLLRLFE-YGGYPPESN-YLFLGDYVDRGKQSLE 104 (320)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCceEecC----CCeEEEeecccCHHHHHHHHH-hcCCCCcce-EEEeceecCCCCCcHH
Confidence 5889999999999999999999999996 579999999999999999999 899987665 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCC
Q 009133 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (542)
Q Consensus 269 vL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~ 348 (542)
++.+|+++|+.+|.++++||||||...++..|||+.|+..+|+.. +|..++++|++||+||+|++++|||||||++
T Consensus 105 vl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~----l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p 180 (320)
T PTZ00480 105 TICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIK----LWKTFTDCFNCLPVAALIDEKILCMHGGLSP 180 (320)
T ss_pred HHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHH----HHHHHHHHHHhccHhheecCcEEEEcCCcCc
Confidence 999999999999999999999999999999999999999999764 9999999999999999999999999999987
Q ss_pred CcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCC-CCCcccccCCCeeeeChhhHHHHH
Q 009133 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEFL 427 (542)
Q Consensus 349 ~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~-~~g~~~n~RG~G~~FG~d~~~~FL 427 (542)
.+.++++|+++.|+. +.+++++++|+|||||.. ..+|.+|+||.|++||++++++||
T Consensus 181 ---------------------~~~~l~~i~~i~rp~-~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl 238 (320)
T PTZ00480 181 ---------------------ELSNLEQIRRIMRPT-DVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFL 238 (320)
T ss_pred ---------------------ccCCHHHHhcccCCC-CCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHH
Confidence 346899999999986 556788999999999986 468999999999999999999999
Q ss_pred hHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEec
Q 009133 428 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLK 507 (542)
Q Consensus 428 ~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~ 507 (542)
++||+++||||||+ +++||++.| +++||||||||||| +..+|+||++.++++. ..+|.+|+
T Consensus 239 ~~n~l~~IiR~Hq~------------v~~G~~~~~---~~~~iTvFSa~~Y~--~~~~N~ga~l~i~~~~--~~~~~~~~ 299 (320)
T PTZ00480 239 KKHELDLICRAHQV------------VEDGYEFFS---KRQLVTLFSAPNYC--GEFDNAGSMMTIDESL--MCSFQILK 299 (320)
T ss_pred HhCCCcEEEEcCcc------------ccCceEEeC---CCcEEEEeCCcccC--CCCCccEEEEEECCCC--cEeEEEec
Confidence 99999999999997 589999987 49999999999999 4789999999999864 67888888
Q ss_pred C
Q 009133 508 A 508 (542)
Q Consensus 508 ~ 508 (542)
+
T Consensus 300 p 300 (320)
T PTZ00480 300 P 300 (320)
T ss_pred C
Confidence 6
No 11
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-68 Score=510.37 Aligned_cols=273 Identities=33% Similarity=0.559 Sum_probs=255.0
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCch
Q 009133 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (542)
Q Consensus 187 ~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (542)
++.||+.++..||+.++++|..|.|++.++ .|++|||||||||+||+.+|+ ..|.-+.++ |||+|||||||.+|
T Consensus 16 ckyLpE~elk~LCe~v~d~L~eEsNvqPV~----tPVTvCGDIHGQFyDL~eLFr-tgG~vP~tn-YiFmGDfVDRGyyS 89 (306)
T KOG0373|consen 16 CKYLPENELKRLCEMVKDILMEESNVQPVS----TPVTVCGDIHGQFYDLLELFR-TGGQVPDTN-YIFMGDFVDRGYYS 89 (306)
T ss_pred cCCCCHHHHHHHHHHHHHHHhhhcCccccC----CCeeEeeccchhHHHHHHHHH-hcCCCCCcc-eEEecccccccccc
Confidence 456999999999999999999999999997 689999999999999999999 777666665 99999999999999
Q ss_pred HHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCC
Q 009133 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (542)
Q Consensus 267 lEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGI 346 (542)
+|++.+|+.||..||.++.|||||||++.+++.|||++||..|||.. ..|+.+.++|+.|++||+|+++++|||||+
T Consensus 90 LEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVFD~LtlaAiID~~vLCVHGGL 166 (306)
T KOG0373|consen 90 LETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVFDFLTLAAIIDEKVLCVHGGL 166 (306)
T ss_pred HHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHHhhhhHHHHhcCcEEEEcCCC
Confidence 99999999999999999999999999999999999999999999987 799999999999999999999999999999
Q ss_pred CCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHH
Q 009133 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEF 426 (542)
Q Consensus 347 s~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~F 426 (542)
|| ++.++|+|+-+.|.. +.|..+..||++||||.....|.-|+||+|++||.+++.+|
T Consensus 167 SP---------------------dirtlDqir~i~R~q-EiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF 224 (306)
T KOG0373|consen 167 SP---------------------DIRTLDQIRLIERNQ-EIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEF 224 (306)
T ss_pred Cc---------------------cceeHHHHHhHHhhc-cCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHH
Confidence 98 567999999999997 45568889999999999999999999999999999999999
Q ss_pred HhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (542)
Q Consensus 427 L~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f 506 (542)
+.-|+|++|.|+||. +.+||++.++ ...++||||||||| .+.+|.||++.++.+ .++++..|
T Consensus 225 ~~iN~L~LicRaHQL------------V~EG~KymF~--eK~lvTVWSAPNYC--YRCGNvAsi~~~d~~--~~r~~k~F 286 (306)
T KOG0373|consen 225 NHINNLNLICRAHQL------------VQEGFKYMFD--EKGLVTVWSAPNYC--YRCGNVASIMSFDDN--LERETKIF 286 (306)
T ss_pred HhccchHHHHhHHHH------------HHhhHHhccC--CCCEEEEecCCchh--hhccCeeeEEEeccc--CCccceee
Confidence 999999999999995 7999999764 44499999999999 589999999999977 47899999
Q ss_pred cC
Q 009133 507 KA 508 (542)
Q Consensus 507 ~~ 508 (542)
.|
T Consensus 287 ~a 288 (306)
T KOG0373|consen 287 SA 288 (306)
T ss_pred ee
Confidence 88
No 12
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.5e-66 Score=532.32 Aligned_cols=271 Identities=32% Similarity=0.625 Sum_probs=249.7
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCch
Q 009133 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (542)
Q Consensus 187 ~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (542)
...++.+++.+||.+|+++|++||++++++ .+++|||||||||.+|.++|+ ..++++.+. |||||||||||++|
T Consensus 22 ~~~i~~~~i~~l~~~~~~il~~e~~ll~i~----~p~~ViGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s 95 (294)
T PTZ00244 22 QILIREEDIRAVLTEVREIFMSQPMLLEIR----PPVRVCGDTHGQYYDLLRIFE-KCGFPPYSN-YLFLGDYVDRGKHS 95 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEecc----CCceeeccCCCCHHHHHHHHH-HcCCCCccc-EEEeeeEecCCCCH
Confidence 346889999999999999999999999997 579999999999999999999 889887655 99999999999999
Q ss_pred HHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCC
Q 009133 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (542)
Q Consensus 267 lEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGI 346 (542)
+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. +|+.++++|++||++|++++++|||||||
T Consensus 96 ~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~----l~~~~~~~f~~lPlaaii~~~il~vHgGi 171 (294)
T PTZ00244 96 VETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIK----LFKAFTDVFNTMPVCCVISEKIICMHGGL 171 (294)
T ss_pred HHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHH----HHHHHHHHHHhCchheEecCeeEEEcCCC
Confidence 99999999999999999999999999999999999999999999754 99999999999999999999999999999
Q ss_pred CCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCC-CCCcccccCCCeeeeChhhHHH
Q 009133 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEE 425 (542)
Q Consensus 347 s~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~-~~g~~~n~RG~G~~FG~d~~~~ 425 (542)
+|. +.++++++++.|+. +.++.++++|+|||||.. ..+|.+|+||.|++||++++++
T Consensus 172 ~p~---------------------~~~l~~i~~i~rp~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~ 229 (294)
T PTZ00244 172 SPD---------------------LTSLASVNEIERPC-DVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVND 229 (294)
T ss_pred Cch---------------------hhHHHHhhhhcccc-CCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHH
Confidence 873 35899999999986 556788999999999987 4689999999999999999999
Q ss_pred HHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEE
Q 009133 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQ 505 (542)
Q Consensus 426 FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~ 505 (542)
||++||+++||||||+ +++||++.| +++|+||||||||| +..+|+||++.++.+. ..+|.+
T Consensus 230 Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~--~~~~N~~a~l~i~~~~--~~~f~~ 290 (294)
T PTZ00244 230 FLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYC--GEFDNDAAVMNIDDKL--QCSFLI 290 (294)
T ss_pred HHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCcccc--CCCCceEEEEEECCCC--cEeEEE
Confidence 9999999999999997 589999977 49999999999999 4689999999998763 678888
Q ss_pred ecC
Q 009133 506 LKA 508 (542)
Q Consensus 506 f~~ 508 (542)
|.|
T Consensus 291 ~~~ 293 (294)
T PTZ00244 291 IPA 293 (294)
T ss_pred eec
Confidence 765
No 13
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.1e-67 Score=541.88 Aligned_cols=271 Identities=37% Similarity=0.660 Sum_probs=251.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcC-CCCCCceEEEeCCccccCCch
Q 009133 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWG 266 (542)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g-~p~~~~~~VFLGDyVDRG~~S 266 (542)
..++..++.+||..+.++|..+|++++++ .||+|||||||||.||+++|. ..| +|+..+ |||||||||||++|
T Consensus 30 ~~l~~~ei~~l~~~~~~if~~~~~l~e~~----aPV~i~GDiHGq~~DLlrlf~-~~g~~pp~~~-ylFLGDYVDRG~~s 103 (331)
T KOG0374|consen 30 VPLSKSEIIKLCDKAREIFLSQPTLLELS----APVKIVGDIHGQFGDLLRLFD-LLGSFPPDQN-YVFLGDYVDRGKQS 103 (331)
T ss_pred eeccHHHHHHHHHHHHHHhcCCCceeecC----CCEEEEccCcCCHHHHHHHHH-hcCCCCCccc-EEEecccccCCccc
Confidence 34888999999999999999999999998 589999999999999999999 999 887665 99999999999999
Q ss_pred HHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCC
Q 009133 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (542)
Q Consensus 267 lEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGI 346 (542)
+|++.+|+++|+.||++|++||||||++.+|..|||++||.++|+. ..+|+.|++.|++||++|+|+++++|+||||
T Consensus 104 lE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGl 180 (331)
T KOG0374|consen 104 LETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDAFNCLPLAALIDGKILCMHGGL 180 (331)
T ss_pred eEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHHHhhCchhheecceEEEecCCC
Confidence 9999999999999999999999999999999999999999999985 2499999999999999999999999999999
Q ss_pred CCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC-CCcccccCCCeeeeChhhHHH
Q 009133 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 425 (542)
Q Consensus 347 s~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~G~~FG~d~~~~ 425 (542)
+| .+.++++|+.+.|+ .++++.++++|||||||... .||.+|.||.++.||++++++
T Consensus 181 sp---------------------~l~~~~~i~~i~rp-~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~ 238 (331)
T KOG0374|consen 181 SP---------------------HLKSLDQIRAIPRP-TDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVED 238 (331)
T ss_pred Ch---------------------hhcChHHHhhccCC-cCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHH
Confidence 98 45789999999999 57778889999999999985 899999999999999999999
Q ss_pred HHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEE
Q 009133 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQ 505 (542)
Q Consensus 426 FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~ 505 (542)
||+++++++||||||+ +.+||++. ++++++||||||+|| +.++|.||++.++.+. ..+|..
T Consensus 239 f~~~~~ldlivRaHqv------------v~dGyeff---a~r~lvTIFSAP~Yc--g~~~n~gavm~Vd~~l--~~sf~~ 299 (331)
T KOG0374|consen 239 FCKKLDLDLIVRAHQV------------VEDGYEFF---AGRKLVTIFSAPNYC--GEFDNAGAVMRVDKNL--KCSFVI 299 (331)
T ss_pred HHHHhCcceEEEcCcc------------ccccceEe---cCceEEEEecCchhc--cccCCceEEEEECCCC--eEEEEE
Confidence 9999999999999997 68999984 469999999999999 5899999999999874 456666
Q ss_pred ecC
Q 009133 506 LKA 508 (542)
Q Consensus 506 f~~ 508 (542)
...
T Consensus 300 l~p 302 (331)
T KOG0374|consen 300 LRP 302 (331)
T ss_pred ecc
Confidence 554
No 14
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=5.8e-66 Score=528.07 Aligned_cols=269 Identities=36% Similarity=0.662 Sum_probs=248.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH
Q 009133 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (542)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (542)
..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+|+.+. |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELE----APLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecC----CceEEEEecCCCHHHHHHHHH-hcCCCCcce-EEEEeeEecCCCCcH
Confidence 35889999999999999999999999996 579999999999999999999 899987665 999999999999999
Q ss_pred HHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCC
Q 009133 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (542)
Q Consensus 268 EvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs 347 (542)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. +|..++++|++||++|++++++||||||++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~----l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~ 170 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPVAAIIDEKIFCMHGGLS 170 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHH----HHHHHHHHHHHhHHHHhhCCcEEEEccCCC
Confidence 9999999999999999999999999999999999999999999764 999999999999999999999999999998
Q ss_pred CCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCC-CCCcccccCCCeeeeChhhHHHH
Q 009133 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEF 426 (542)
Q Consensus 348 ~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~-~~g~~~n~RG~G~~FG~d~~~~F 426 (542)
+ .+.++++|+++.|+. +.+..++++|+|||||.. ..+|.+|+||.|++||++++++|
T Consensus 171 p---------------------~~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~F 228 (293)
T cd07414 171 P---------------------DLQSMEQIRRIMRPT-DVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKF 228 (293)
T ss_pred c---------------------ccCcHHHHhcccCCC-CCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHH
Confidence 7 346899999999986 556788999999999986 46899999999999999999999
Q ss_pred HhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (542)
Q Consensus 427 L~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f 506 (542)
|++||+++||||||+ +++||++.| +++||||||||||| +.++|+||++.++.+. ..+|.+|
T Consensus 229 l~~n~l~~iiR~He~------------~~~G~~~~~---~~~~iTvfSa~~Y~--~~~~N~~a~l~i~~~~--~~~~~~~ 289 (293)
T cd07414 229 LNKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYC--GEFDNAGAMMSVDETL--MCSFQIL 289 (293)
T ss_pred HHHcCCeEEEECCcc------------ccCeEEEeC---CCcEEEEecCCccc--CCCCceEEEEEECCCC--cEEEEEe
Confidence 999999999999997 589999976 49999999999999 4689999999999863 5678887
Q ss_pred c
Q 009133 507 K 507 (542)
Q Consensus 507 ~ 507 (542)
+
T Consensus 290 ~ 290 (293)
T cd07414 290 K 290 (293)
T ss_pred c
Confidence 6
No 15
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.9e-65 Score=519.41 Aligned_cols=267 Identities=41% Similarity=0.706 Sum_probs=247.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHH
Q 009133 191 PVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL 270 (542)
Q Consensus 191 ~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL 270 (542)
+++++.+||++|+++|++||++++++ ++++||||||||+.+|.++|+ ..+.++.+ .|||||||||||++|+|++
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDiHG~~~~l~~ll~-~~~~~~~~-~~vfLGD~VDrG~~s~e~l 75 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVS----APVTVCGDIHGQFDDLLRLFD-LNGPPPDT-NYVFLGDYVDRGPFSIEVI 75 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeC----CCEEEEEeCcCCHHHHHHHHH-HcCCCCCc-eEEEeCCccCCCCChHHHH
Confidence 56889999999999999999999996 689999999999999999999 88887655 4999999999999999999
Q ss_pred HHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCc
Q 009133 271 LVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRT 350 (542)
Q Consensus 271 ~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~ 350 (542)
.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++|++++++||||||+++
T Consensus 76 ~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~-- 149 (271)
T smart00156 76 LLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSP-- 149 (271)
T ss_pred HHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCC--
Confidence 999999999999999999999999999999999999999975 49999999999999999999999999999987
Q ss_pred CCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCC-CCCCcccccCCCeeeeChhhHHHHHhH
Q 009133 351 CSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPS-SEAGLRENTKKFGLLWGPDCTEEFLKE 429 (542)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~-~~~g~~~n~RG~G~~FG~d~~~~FL~~ 429 (542)
.+.++++|+++.|+. +.+.+.+++|+|||||. ...+|.+|.||.|+.||++++++||++
T Consensus 150 -------------------~~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~ 209 (271)
T smart00156 150 -------------------DLTTLDDIRKLKRPQ-EPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKK 209 (271)
T ss_pred -------------------ccCCHHHHhcccCCC-CCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHH
Confidence 357999999999986 55678899999999995 467999999999999999999999999
Q ss_pred cCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC
Q 009133 430 NHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA 508 (542)
Q Consensus 430 n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~ 508 (542)
||+++||||||+ +++||++.|+ |+|+||||||||| +.++|+||++.++++ .+++|.+|++
T Consensus 210 n~l~~iiR~He~------------~~~G~~~~~~---~~~~TvfSa~~y~--~~~~n~~a~~~i~~~--~~~~~~~~~~ 269 (271)
T smart00156 210 NNLKLIIRAHQV------------VDDGYEFFHD---RKLVTIFSAPNYC--GRFGNKAAVLKVDKD--LKLSFEQFKP 269 (271)
T ss_pred CCCeEEEecCcc------------cCCcEEEecC---CcEEEEECCcccc--cCCCceEEEEEECCC--CcEEEEEecC
Confidence 999999999997 5799999884 9999999999999 468999999999886 4788999874
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.6e-67 Score=529.70 Aligned_cols=280 Identities=33% Similarity=0.592 Sum_probs=251.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHH
Q 009133 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (542)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (542)
.|.++.++.|+.++..+|++|+++++|+ .||+|||||||||.||+++|+ ..|.|..+ .|+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~----APiTVCGDIHGQf~DLmKLFE-VGG~PA~t-~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVE----APITVCGDIHGQFFDLMKLFE-VGGSPANT-RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEecc----CCeeEecccchHHHHHHHHHH-ccCCcccc-eeEeeccccccceeeee
Confidence 3778999999999999999999999997 789999999999999999999 77776655 49999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCC
Q 009133 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (542)
Q Consensus 269 vL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~ 348 (542)
|+++|.+||+.||..+++||||||++.++..+.|..||+-||... +|+.+.+.|++|||||+.++.+||||||+||
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~----vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHH----HHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 999999999999999999999999999999999999999999886 9999999999999999999999999999998
Q ss_pred CcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC-------CCccccc-CCCeeeeCh
Q 009133 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-------AGLRENT-KKFGLLWGP 420 (542)
Q Consensus 349 ~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-------~g~~~n~-RG~G~~FG~ 420 (542)
.+.+++||++++|+. +||..+.|||||||||.++ .-|.+|. ||+++.|..
T Consensus 210 ---------------------Ei~tl~DIr~l~RF~-EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy 267 (517)
T KOG0375|consen 210 ---------------------EIHTLDDIRKLDRFK-EPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSY 267 (517)
T ss_pred ---------------------ccccHHHHHhhhhcc-CCCccCcchhhhccChhhhccccccccccccCccccccceech
Confidence 568999999999997 6778999999999999874 2477887 999999999
Q ss_pred hhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCC
Q 009133 421 DCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDS 500 (542)
Q Consensus 421 d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~ 500 (542)
.++.+||+.|||--|||+||.+|+++. | |+-..-..-..+|||||||||. +.|+|+||++..+.+ .
T Consensus 268 ~A~C~FLq~nnLLSIiRAHEAQDaGYR------M---YrksqttGFPSLiTiFSAPNYL--DvYnNKAAvLKYEnN---V 333 (517)
T KOG0375|consen 268 PAVCEFLQNNNLLSIIRAHEAQDAGYR------M---YRKSQTTGFPSLITIFSAPNYL--DVYNNKAAVLKYENN---V 333 (517)
T ss_pred HHHHHHHHhCCchhhhhhhhhhhhhhh------h---hhcccccCCchheeeecCCchh--hhhccHHHHhhhhcc---c
Confidence 999999999999999999999875542 1 2221112336899999999999 589999999999865 5
Q ss_pred CeEEEecC-CCCCCC
Q 009133 501 PLFLQLKA-AEKPEV 514 (542)
Q Consensus 501 p~f~~f~~-~~p~~~ 514 (542)
....||.. |||---
T Consensus 334 MNIRQFncSPHPYWL 348 (517)
T KOG0375|consen 334 MNIRQFNCSPHPYWL 348 (517)
T ss_pred ceeeccCCCCCCccc
Confidence 68999999 998543
No 17
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=5e-63 Score=510.51 Aligned_cols=280 Identities=36% Similarity=0.612 Sum_probs=249.6
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCC-------CceEEE
Q 009133 183 PKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSD-------HRYFVF 255 (542)
Q Consensus 183 ~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~-------~~~~VF 255 (542)
++..+..++.+++.+||++|.++|++||++++++ .+++|||||||||.+|.++|+ ..|+|+. +..|||
T Consensus 14 ~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~----~~~~viGDIHG~~~~L~~ll~-~~g~~~~~~~~~~~~~~~vf 88 (311)
T cd07419 14 PTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLR----APIKIFGDIHGQFGDLMRLFD-EYGSPVTEAAGDIEYIDYLF 88 (311)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeC----CCEEEEEeccCCHHHHHHHHH-HcCCCcccccCCCcCceEEE
Confidence 3444567899999999999999999999999996 579999999999999999999 8888754 246999
Q ss_pred eCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCcc--chhhhhhhhhhhhcCCCceE
Q 009133 256 NGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKK--DCKLVFDKCLECFRTLPLAT 333 (542)
Q Consensus 256 LGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~--~~~~l~~~~~~~f~~LPlaa 333 (542)
||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||..++..+|+.. .+..+|..+.++|++||+++
T Consensus 89 LGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~a 168 (311)
T cd07419 89 LGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAA 168 (311)
T ss_pred ECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhh
Confidence 9999999999999999999999999999999999999999999999999999999862 24569999999999999999
Q ss_pred EeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC---CCcccc
Q 009133 334 IIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE---AGLREN 410 (542)
Q Consensus 334 iI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~---~g~~~n 410 (542)
+++++++||||||++. +.++++|..+.|+...++.+.+++|+|||||... .++.+|
T Consensus 169 vi~~~~l~vHgGi~p~---------------------~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~ 227 (311)
T cd07419 169 IIEDKILCMHGGIGRS---------------------INHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPN 227 (311)
T ss_pred eecccEEEEccCCCCC---------------------CCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccC
Confidence 9999999999999873 4689999999998755567789999999999974 477777
Q ss_pred c---CCCe--eeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCC
Q 009133 411 T---KKFG--LLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFD 485 (542)
Q Consensus 411 ~---RG~G--~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~ 485 (542)
. ||.| +.||++++++||++||+++||||||+ +.+||++.| +|+|+||||||||| +.++
T Consensus 228 ~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfSa~~y~--~~~~ 290 (311)
T cd07419 228 AIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFSATNYC--GTAG 290 (311)
T ss_pred CCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEecCCccc--CCCC
Confidence 6 9999 69999999999999999999999997 589999977 49999999999999 4789
Q ss_pred CceEEEEEeCCCCCCCeEEEec
Q 009133 486 NVGAYAVLKPPLFDSPLFLQLK 507 (542)
Q Consensus 486 N~gA~l~l~~~~~~~p~f~~f~ 507 (542)
|+||+++++.+. +.+|.+++
T Consensus 291 n~~ai~~i~~~~--~~~~~~~~ 310 (311)
T cd07419 291 NAGAILVLGRDL--TIIPKLIH 310 (311)
T ss_pred ceEEEEEECCCC--cEeEEEeC
Confidence 999999998864 55665554
No 18
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-63 Score=486.92 Aligned_cols=283 Identities=34% Similarity=0.594 Sum_probs=259.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhc
Q 009133 165 LEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENA 244 (542)
Q Consensus 165 ~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~ 244 (542)
..|+++|++ ++.+++..+..+|+.|+++|++|.|+..+. .+++||||+||||++|+++|+ ..
T Consensus 21 d~~ie~L~~-------------ck~lse~~v~~lc~~a~~~L~~e~nV~~v~----~pvtvcGDvHGqf~dl~ELfk-iG 82 (319)
T KOG0371|consen 21 DPWIEQLYK-------------CKPLSEVDVSSLCLLAKEILDKEENVQPVN----CPVTVCGDVHGQFHDLIELFK-IG 82 (319)
T ss_pred ccchHHHHh-------------cCCCccccchhHHHHHHHHHhccccccccc----cceEEecCcchhHHHHHHHHH-cc
Confidence 456677765 235667888899999999999999999997 689999999999999999999 77
Q ss_pred CCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhh
Q 009133 245 GFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLE 324 (542)
Q Consensus 245 g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~ 324 (542)
|..+..+ |+|+|||||||++|+|++.+|.++|+.||++|.+||||||++.+++.|||++||.+|||.. .+|+.|.+
T Consensus 83 G~~pdtn-ylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftd 158 (319)
T KOG0371|consen 83 GLAPDTN-YLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTD 158 (319)
T ss_pred CCCCCcc-eeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhh
Confidence 7776666 9999999999999999999999999999999999999999999999999999999999987 79999999
Q ss_pred hhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC
Q 009133 325 CFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE 404 (542)
Q Consensus 325 ~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~ 404 (542)
.|+++|++|+|+++|||.|||++| ++.+++.++.++|.+ +.|-++.+||||||||+..
T Consensus 159 lfdy~P~tali~~~ifc~HGgLsp---------------------si~tld~~r~~dr~~-evphegpmcDlLwsdpddr 216 (319)
T KOG0371|consen 159 LFDYLPLTALIESKIFCLHGGLSP---------------------SIDTLDLIRLLDRIQ-EVPHEGPMCDLLWSDPDDR 216 (319)
T ss_pred hhhccchHhhhccceeeccCCcCc---------------------ccchHHHHHHHHHhh-cccCCCChhheeccCcccC
Confidence 999999999999999999999998 457999999999954 5667888999999999999
Q ss_pred CCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCC
Q 009133 405 AGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGF 484 (542)
Q Consensus 405 ~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~ 484 (542)
.||..++||+|+.||+++.++|-.+||+++|-|+||. +++||.|.|+ ..++|+||||||| .+.
T Consensus 217 ~gwg~sprgag~tfg~di~~~fn~~n~lslisRahql------------vm~g~nW~~~---~~~vtiFSapnyc--Yrc 279 (319)
T KOG0371|consen 217 CGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQL------------VMEGYNWYHL---WNVVTIFSAPNYC--YRC 279 (319)
T ss_pred CCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHH------------Hhcccceeee---cceeEEccCCchh--hcc
Confidence 9999999999999999999999999999999999995 6899999996 7788999999999 589
Q ss_pred CCceEEEEEeCCCCCCCeEEEecC-CC
Q 009133 485 DNVGAYAVLKPPLFDSPLFLQLKA-AE 510 (542)
Q Consensus 485 ~N~gA~l~l~~~~~~~p~f~~f~~-~~ 510 (542)
+|.+|++.++.. ....|.||+. |+
T Consensus 280 gn~a~i~e~d~~--~~~~f~q~~psp~ 304 (319)
T KOG0371|consen 280 GNQAAIMERDDT--KNYDFLQFDPSPR 304 (319)
T ss_pred ccHHHHhhhhhc--cCcceEEecCCcc
Confidence 999999998865 4678999999 65
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3.8e-32 Score=264.75 Aligned_cols=217 Identities=40% Similarity=0.604 Sum_probs=166.2
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChh
Q 009133 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 303 (542)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~ 303 (542)
+|||||||++++|.++++ ..+.++. ..+||+|||||||+.|.+++.+++.++.. |.++++|+||||.+.++..+++.
T Consensus 1 ~~igDiHg~~~~l~~~l~-~~~~~~~-d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~ 77 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLE-KIGFPPN-DKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFY 77 (225)
T ss_pred CEEeCCCCCHHHHHHHHH-HhCCCCC-CEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCc
Confidence 589999999999999999 8877554 45999999999999999999999999877 88999999999999988777665
Q ss_pred HHHH-----HHhCccchhhhhhhhhhhhcCCCceEEeec-eEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHH
Q 009133 304 AELC-----TKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREF 377 (542)
Q Consensus 304 ~E~~-----~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~-~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI 377 (542)
.+.. ..........++..+.++|..||+++.++. +++|||||+++.. ....++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---------------------~~~~~~ 136 (225)
T cd00144 78 DEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---------------------PLEEQI 136 (225)
T ss_pred chhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---------------------chHHhh
Confidence 4421 000111134578888999999999999886 9999999998643 111111
Q ss_pred HhhhccccCCCCccccccccccCCCCCCCccc-ccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccC
Q 009133 378 AKVNRFLEDVPENDLLSDVLWSDPSSEAGLRE-NTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLN 456 (542)
Q Consensus 378 ~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~-n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~ 456 (542)
. ..+..+...+++|++|........ +.|+. |+++++.|++.++.+.|||||++ +..
T Consensus 137 ~-------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~------------~~~ 193 (225)
T cd00144 137 K-------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP------------VEE 193 (225)
T ss_pred h-------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc------------ccC
Confidence 1 122455678999999986554333 23444 99999999999999999999997 356
Q ss_pred CceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEE
Q 009133 457 GYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAV 492 (542)
Q Consensus 457 Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~ 492 (542)
|+.... .++++||+|++.|+ +..+|..+.+.
T Consensus 194 ~~~~~~---~~~~i~IDtg~~~~--~~~~~~l~~~~ 224 (225)
T cd00144 194 GYEFGH---DGNLITIDSGCNYC--GGGGNKLAALV 224 (225)
T ss_pred ccEEcC---CCCEEEEecCCccc--CCCCccEEEEe
Confidence 664322 48999999999998 35677766553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.91 E-value=4.3e-24 Score=213.81 Aligned_cols=126 Identities=21% Similarity=0.414 Sum_probs=98.0
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCC--------CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFP--------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p--------~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
++++||||||||++.|.++++ ..++. +++..+||||||||||++|.|||.+|+.+. .+.++++||||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~-~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTE-KLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHH-HcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccH
Confidence 468999999999999999999 87764 344569999999999999999999998884 5568999999999
Q ss_pred ccccccccC-------hhHHHHHHhCcc---chhhhhhhhhhhhcCCCceEEee-ceEEEeccCCCCC
Q 009133 293 TKNCTLAYG-------FWAELCTKFGKK---DCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (542)
Q Consensus 293 ~~~~n~~yG-------F~~E~~~ky~~~---~~~~l~~~~~~~f~~LPlaaiI~-~~il~vHGGIs~~ 349 (542)
.++++...+ ...+....|... ....+++.+.++|+.+|++..+. ++++|||||+.+.
T Consensus 78 ~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 78 NKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 887653221 112333344321 12347788999999999998774 6799999999763
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.88 E-value=2.1e-22 Score=197.23 Aligned_cols=180 Identities=19% Similarity=0.251 Sum_probs=123.2
Q ss_pred EEEecCCCCHHHHHHHHHHhcCC-------CCCCceEEEeCCccccCCchHHHHHHHHHhhhc---CCCeEEEecCCccc
Q 009133 224 IVVGDILGQFHDLVALFEENAGF-------PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVL---MPHRVYLLRGNHET 293 (542)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~-------p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~---~P~~v~lLRGNHE~ 293 (542)
+||||||||+..|.++++ .++. ......+||+|||||||+++.||+.+|+.++.. .+.++++++||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~-~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILK-GAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHH-HCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 589999999999999999 7764 234567999999999999999999999998743 45789999999999
Q ss_pred cccccccChhH--HHHHHhCc-cchhhhh---hhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccc
Q 009133 294 KNCTLAYGFWA--ELCTKFGK-KDCKLVF---DKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLD 367 (542)
Q Consensus 294 ~~~n~~yGF~~--E~~~ky~~-~~~~~l~---~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~ 367 (542)
+.++..+.+.. +....... .....++ ..+.+|+..+|+...++ ++++||||+++-.
T Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~w----------------- 141 (208)
T cd07425 80 MNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPLW----------------- 141 (208)
T ss_pred HHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHHH-----------------
Confidence 98875443321 11111110 0011122 34478999999998765 6888999984311
Q ss_pred cCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCC
Q 009133 368 TLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTG 447 (542)
Q Consensus 368 ~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~ 447 (542)
.|. |+.|.. +.+ -|++.++++|+.++.++||+|||.
T Consensus 142 -------------~r~--------------y~~~~~------~~~-----~~~~~~~~~l~~~~~~~iv~GHTh------ 177 (208)
T cd07425 142 -------------YRG--------------YSKETS------DKE-----CAAAHLDKVLERLGAKRMVVGHTP------ 177 (208)
T ss_pred -------------hhH--------------hhhhhh------hcc-----chHHHHHHHHHHcCCCeEEEcCee------
Confidence 000 000000 000 012568889999999999999996
Q ss_pred CCCcccccCCceeeccCCCCeEEEEecC
Q 009133 448 ADDARNMLNGYSKDHDTVSGELYTLFTA 475 (542)
Q Consensus 448 r~~~~~v~~Gy~~~h~~~~gkliTVFSA 475 (542)
+..|+.... +|++|+|.+.
T Consensus 178 ------~~~~~~~~~---~g~~i~ID~g 196 (208)
T cd07425 178 ------QEGGIVTFC---GGKVIRIDVG 196 (208)
T ss_pred ------eecCceEEE---CCEEEEEeCC
Confidence 344543223 5999999974
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.87 E-value=1.2e-21 Score=194.47 Aligned_cols=123 Identities=23% Similarity=0.402 Sum_probs=96.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCC---------CceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSD---------HRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~---------~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNH 291 (542)
++|.||||||||+..|.++|+ ..++... ...+||||||||||++|.||+.+|..++. +.+++++||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~-~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLE-KLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHH-HcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCc
Confidence 479999999999999999999 7766532 35699999999999999999999998863 34799999999
Q ss_pred cccccccc--------cChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEee-ceEEEeccCCCC
Q 009133 292 ETKNCTLA--------YGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFR 348 (542)
Q Consensus 292 E~~~~n~~--------yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~-~~il~vHGGIs~ 348 (542)
|.++++.. +|+. +....|... ...+.+.+.++|+.||+...++ ++++|||||+++
T Consensus 78 E~~l~~~~~~~~~~~~~~~~-~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~ 141 (234)
T cd07423 78 DNKLYRKLQGRNVKITHGLE-ETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKE 141 (234)
T ss_pred HHHHHHHhcCCCccccCccc-chHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCCh
Confidence 99876542 2332 223334322 2357788899999999988775 579999999875
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.86 E-value=3e-21 Score=190.82 Aligned_cols=118 Identities=26% Similarity=0.344 Sum_probs=90.6
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCC-------CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccc
Q 009133 224 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC 296 (542)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p-------~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~ 296 (542)
+||||||||++.|.++++ ..++. +....+|||||||||||+|.||+.+|+.+. .+.++++|+||||.+++
T Consensus 2 ~vIGDIHG~~~~L~~lL~-~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll 78 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLH-KLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAI 78 (222)
T ss_pred EEEEeccCCHHHHHHHHH-HcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHH
Confidence 699999999999999999 77654 124579999999999999999999999885 34589999999999876
Q ss_pred ccccC------------h-----hHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCC
Q 009133 297 TLAYG------------F-----WAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (542)
Q Consensus 297 n~~yG------------F-----~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs 347 (542)
....+ . ..+....++. ..+.++.+.+||+.||++... ++++|||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43211 0 0122333332 124668889999999998765 67999999984
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.85 E-value=6.3e-21 Score=194.40 Aligned_cols=122 Identities=23% Similarity=0.319 Sum_probs=96.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~y 300 (542)
++++||||||||+..|.++++ ..++.+..+.++|+|||||||++|.||+.+|..+ +.+++.++||||.+.+...+
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~-~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~ 75 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLE-KIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAA 75 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHH-hcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhc
Confidence 468999999999999999999 8876555566999999999999999999999876 34799999999998877666
Q ss_pred ChhHH----HHHHhCccchhhhhhhhhhhhcCCCceEEe-eceEEEeccCCCCCc
Q 009133 301 GFWAE----LCTKFGKKDCKLVFDKCLECFRTLPLATII-AQGVYTTHGGLFRRT 350 (542)
Q Consensus 301 GF~~E----~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI-~~~il~vHGGIs~~~ 350 (542)
|+... ....+-. ....+.+.++++.+|+...+ ++++++||||++|..
T Consensus 76 g~~~~~~~~~l~~~l~---~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 76 GIKRNKKKDTLDPILE---APDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred CCccccchhHHHHHHc---cccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 64311 1111111 12445678999999998776 568999999998753
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.85 E-value=3.8e-21 Score=194.24 Aligned_cols=120 Identities=23% Similarity=0.311 Sum_probs=96.1
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccCh
Q 009133 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGF 302 (542)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF 302 (542)
++||||||||+..|.++++ ..++.+..+.++|+|||||||++|+||+.+|..++ .+++.++||||.+.++..+|+
T Consensus 1 ~yvIGDIHG~~~~L~~LL~-~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~ 75 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLE-KINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGI 75 (257)
T ss_pred CEEEECCCCCHHHHHHHHH-hcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCc
Confidence 4899999999999999999 88876556679999999999999999999999885 479999999999988766664
Q ss_pred hHH----HHHHhCccchhhhhhhhhhhhcCCCceEEeec-eEEEeccCCCCCc
Q 009133 303 WAE----LCTKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRT 350 (542)
Q Consensus 303 ~~E----~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~-~il~vHGGIs~~~ 350 (542)
... ....+- .....+.+.++++.+|++..+++ ++++|||||+|..
T Consensus 76 ~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 76 KKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW 125 (257)
T ss_pred cccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC
Confidence 311 111110 11234578899999999988764 8999999998854
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.84 E-value=7.3e-21 Score=187.27 Aligned_cols=127 Identities=21% Similarity=0.254 Sum_probs=92.2
Q ss_pred eeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccc
Q 009133 214 KLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 214 ~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~ 293 (542)
.+.....++++||||||||+..|.++|+ ..++.+....++|||||||||++|.|||.+|... +++.++||||.
T Consensus 10 ~~~~~~~~ri~vigDIHG~~~~L~~lL~-~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~ 82 (218)
T PRK11439 10 RIAGHQWRHIWLVGDIHGCFEQLMRKLR-HCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQ 82 (218)
T ss_pred cccCCCCCeEEEEEcccCCHHHHHHHHH-hcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHH
Confidence 4444444699999999999999999999 7776645556999999999999999999998542 57899999999
Q ss_pred cccccccChhHHHHHHhCc-------cchhhhhhhhhhhhcCCCceEEee---ceEEEeccCCC
Q 009133 294 KNCTLAYGFWAELCTKFGK-------KDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 347 (542)
Q Consensus 294 ~~~n~~yGF~~E~~~ky~~-------~~~~~l~~~~~~~f~~LPlaaiI~---~~il~vHGGIs 347 (542)
++++...+-....+...|. ......+..+.++++.||+...+. +++++||||++
T Consensus 83 ~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 83 MALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 8876422110011111110 011234566678999999986653 57999999985
No 27
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.84 E-value=7.3e-21 Score=193.54 Aligned_cols=121 Identities=24% Similarity=0.334 Sum_probs=98.0
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~y 300 (542)
+.++||||||||++.|.++|+ ..++.+..+.++|+||+||||++|+||+.++..+. +++++++||||.+.++..+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~-~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~ 75 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLE-RVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFA 75 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHH-HhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhc
Confidence 358999999999999999999 88876666679999999999999999999998764 4688999999999988777
Q ss_pred Chh-----HHHHHHhCccchhhhhhhhhhhhcCCCceEEee-ceEEEeccCCCCCc
Q 009133 301 GFW-----AELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRRT 350 (542)
Q Consensus 301 GF~-----~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~-~~il~vHGGIs~~~ 350 (542)
|+. +....-+.. ...+.+.++++.+|+..... .++++|||||+|..
T Consensus 76 g~~~~~~~d~l~~~l~a----~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w 127 (279)
T TIGR00668 76 GISRNKPKDRLDPLLEA----PDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW 127 (279)
T ss_pred CCCccCchHHHHHHHHc----cCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC
Confidence 752 122222222 35678899999999986554 46999999999865
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.83 E-value=2.1e-20 Score=190.92 Aligned_cols=74 Identities=31% Similarity=0.415 Sum_probs=62.8
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCC-----CCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCC-eEEEecCCccccc
Q 009133 222 EVIVVGDILGQFHDLVALFEENAGF-----PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPH-RVYLLRGNHETKN 295 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~-----p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~-~v~lLRGNHE~~~ 295 (542)
++++||||||+++.|.++++ .... +.....+||||||||||++|.+|+.+|+.++..+|. ++++|+||||.++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~-~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWL-NLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred eEEEEEeccCCHHHHHHHHH-HhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 69999999999999999988 4321 123446999999999999999999999999988876 6889999999765
Q ss_pred c
Q 009133 296 C 296 (542)
Q Consensus 296 ~ 296 (542)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 4
No 29
>PHA02239 putative protein phosphatase
Probab=99.83 E-value=2.3e-20 Score=186.29 Aligned_cols=125 Identities=19% Similarity=0.262 Sum_probs=91.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCC-CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFP-SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA 299 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p-~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~ 299 (542)
+++++||||||++..|.++++ ..... .....+||+|||||||+.|.+++..|+.+. ..+.++++++||||.+++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~-~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~ 78 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMD-KINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIM 78 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHH
Confidence 468999999999999999998 55322 123459999999999999999999999875 345689999999999865421
Q ss_pred c--------------ChhHHHHHHhCccch---------------------------hhhhhhhhhhhcCCCceEEeece
Q 009133 300 Y--------------GFWAELCTKFGKKDC---------------------------KLVFDKCLECFRTLPLATIIAQG 338 (542)
Q Consensus 300 y--------------GF~~E~~~ky~~~~~---------------------------~~l~~~~~~~f~~LPlaaiI~~~ 338 (542)
. ....+....|+.... ...+..+..|++.||+.... ++
T Consensus 79 ~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~ 157 (235)
T PHA02239 79 ENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DK 157 (235)
T ss_pred hCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CC
Confidence 0 011244566653211 11345667799999998664 67
Q ss_pred EEEeccCCCC
Q 009133 339 VYTTHGGLFR 348 (542)
Q Consensus 339 il~vHGGIs~ 348 (542)
++|||||+.|
T Consensus 158 ~ifVHAGi~p 167 (235)
T PHA02239 158 YIFSHSGGVS 167 (235)
T ss_pred EEEEeCCCCC
Confidence 9999999965
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.82 E-value=5.7e-20 Score=179.10 Aligned_cols=121 Identities=24% Similarity=0.245 Sum_probs=94.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~y 300 (542)
++++|||||||++..|.++++ ..++....+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~-~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~ 73 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALD-AVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALR 73 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHH-HcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhh
Confidence 479999999999999999999 777655556699999999999999999998864 2689999999999887654
Q ss_pred C--hhHHHHHHhCccc-----hhhhhhhhhhhhcCCCceEEee---ceEEEeccCCCC
Q 009133 301 G--FWAELCTKFGKKD-----CKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFR 348 (542)
Q Consensus 301 G--F~~E~~~ky~~~~-----~~~l~~~~~~~f~~LPlaaiI~---~~il~vHGGIs~ 348 (542)
+ +..+.+.+++... ...+++.+.++|+.||+...+. +++++||||+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~ 131 (207)
T cd07424 74 AEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPS 131 (207)
T ss_pred CCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCc
Confidence 4 2333333333321 1124566888999999998775 479999999864
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.78 E-value=8.1e-19 Score=173.06 Aligned_cols=129 Identities=21% Similarity=0.236 Sum_probs=90.5
Q ss_pred eeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCc
Q 009133 212 CVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 212 lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNH 291 (542)
+..+.....++++||||||||++.|.++++ ...+....+.++|+|||||||++|.||+.+|.. .+++.+||||
T Consensus 6 ~~~~~~~~~~ri~visDiHg~~~~l~~~l~-~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNH 78 (218)
T PRK09968 6 YQKINAHHYRHIWVVGDIHGEYQLLQSRLH-QLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNH 78 (218)
T ss_pred eeeccCCCCCeEEEEEeccCCHHHHHHHHH-hcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECch
Confidence 334544444699999999999999999999 776555556699999999999999999998853 2688999999
Q ss_pred cccccccccChhHHHHHH------hCcc-chhhhhhhhhhhhcCCCceEEee---ceEEEeccCCC
Q 009133 292 ETKNCTLAYGFWAELCTK------FGKK-DCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 347 (542)
Q Consensus 292 E~~~~n~~yGF~~E~~~k------y~~~-~~~~l~~~~~~~f~~LPlaaiI~---~~il~vHGGIs 347 (542)
|.+++....+-....+.. +... ...........+++.||+...+. +++++||||++
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 998865321100001111 1110 01123344566899999987663 46899999984
No 32
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.54 E-value=4.7e-16 Score=165.82 Aligned_cols=338 Identities=17% Similarity=0.038 Sum_probs=251.2
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCc
Q 009133 186 FRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW 265 (542)
Q Consensus 186 ~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~ 265 (542)
....++.+.+..++.-+.+++..+||+..+......-.+.++|.||++.|+.+.++ .. |.....|++.|++++++.+
T Consensus 11 an~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie-~d--P~~~K~Y~rrg~a~m~l~~ 87 (476)
T KOG0376|consen 11 ANEALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIE-LD--PTYIKAYVRRGTAVMALGE 87 (476)
T ss_pred HhhhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhh-cC--chhhheeeeccHHHHhHHH
Confidence 33456678888999999999999999999976544568899999999999999999 43 7677789999999999999
Q ss_pred hHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccC
Q 009133 266 GLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGG 345 (542)
Q Consensus 266 SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGG 345 (542)
..+.+..|...+...|+...+.|++||+..+..+|+|..++...++.. +..++..+...+.. |+++.+.+.++=-| -
T Consensus 88 ~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~-k 164 (476)
T KOG0376|consen 88 FKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH-K 164 (476)
T ss_pred HHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-h
Confidence 999999999999999999999999999999999999999999888765 44445444433332 24445554444222 1
Q ss_pred CCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCC-CccccccccccCCCCCCCccccc-CCCeeeeChhhH
Q 009133 346 LFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVP-ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCT 423 (542)
Q Consensus 346 Is~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~-~~~l~~DLLWSDP~~~~g~~~n~-RG~G~~FG~d~~ 423 (542)
+.... +... ....+........-..++.+..+..+..++++ +-....+.+||+|....|-..+. ++.+..++|+.+
T Consensus 165 vt~e~-vk~~-~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t 242 (476)
T KOG0376|consen 165 VTLEF-VKTL-MEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSET 242 (476)
T ss_pred hhHHH-HHHH-HHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCc
Confidence 11000 0000 00001111111122334444333333333333 33477899999999988877776 999999999999
Q ss_pred HHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCC----CCCCc-eEEEEEeCCCC
Q 009133 424 EEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVD----GFDNV-GAYAVLKPPLF 498 (542)
Q Consensus 424 ~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~----~~~N~-gA~l~l~~~~~ 498 (542)
..||...++..+++.|.-++.+.++-++..+..+|...|+..++.++|+|+++.+|.+. .++|. +++..+--...
T Consensus 243 ~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~ 322 (476)
T KOG0376|consen 243 NPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHL 322 (476)
T ss_pred ccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhh
Confidence 99999999999999999999999999999999999998888889999999999999643 45666 78888865666
Q ss_pred CCCeEEEecC--CCCCCC--CCccccccccCCCCCCc
Q 009133 499 DSPLFLQLKA--AEKPEV--WNFDVFYFLFFPPSEGI 531 (542)
Q Consensus 499 ~~p~f~~f~~--~~p~~~--y~~~~~~~~~~~~~~~~ 531 (542)
....|..+.+ |+|+.. |++...-.-=-||+++.
T Consensus 323 i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~ 359 (476)
T KOG0376|consen 323 INNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGL 359 (476)
T ss_pred hcCceEEEecCcCCCCCccHHHHHhhhhccCCccccc
Confidence 7888999999 888877 77766554445555544
No 33
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=99.52 E-value=4.2e-14 Score=122.78 Aligned_cols=92 Identities=21% Similarity=0.371 Sum_probs=64.4
Q ss_pred HHHhhhhhhhhhhhHHhhhhhhhhhhhccchhhhhccCCCcccccCC--CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCC
Q 009133 103 RSACNIVSKQRVFDSSLQGLLEELQVEVGSTMRERLVGGKLENLTKE--QDTLPLSWPRNGRISLEWIQLLISTFKWSSW 180 (542)
Q Consensus 103 ~~~c~ki~k~~~fe~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~ 180 (542)
-.+|.|++|+++||+||++ ++.+.++.++. +++++.++ ++||++ +++.+|.+|+.+|+++|+.++
T Consensus 2 l~ec~k~ir~~~FekAI~~--d~~~~s~~e~~-------d~~~i~Ve~sY~GP~l---~~~~it~efv~~mie~FK~~K- 68 (95)
T PF08321_consen 2 LKECEKLIRRIAFEKAIAV--DEEKKSVSESI-------DLESIDVEDSYDGPRL---EDEPITLEFVKAMIEWFKNQK- 68 (95)
T ss_dssp HHHHHHHHHHHHHSHHHHH--HHHHHSTTTS--------TTSTT---SS--SS-----BTTB--HHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHHhcc--CCcccCHHHhc-------CccceecCCCCCCCCC---CCCCCCHHHHHHHHHHHHhCC-
Confidence 4699999999999999999 43333333322 55555555 489999 556799999999999999754
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeee
Q 009133 181 KDPKEFRNVMPVTVVKKLISAASKIMREERNCVKL 215 (542)
Q Consensus 181 ~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l 215 (542)
.||.+|++.|+.+|.++|+++||+|+|
T Consensus 69 --------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 69 --------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -----------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred --------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 589999999999999999999999986
No 34
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.20 E-value=7.1e-11 Score=103.97 Aligned_cols=78 Identities=23% Similarity=0.365 Sum_probs=57.1
Q ss_pred ceEEEecCCCCHHHH---HHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHH--HHhhhcCCCeEEEecCCcccccc
Q 009133 222 EVIVVGDILGQFHDL---VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVL--LAWKVLMPHRVYLLRGNHETKNC 296 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL---~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL--~~LK~~~P~~v~lLRGNHE~~~~ 296 (542)
+|.++||+||..... .+.+..... ......+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 689999999999987 333331222 233445999999999999998877765 45555677789999999999876
Q ss_pred cccc
Q 009133 297 TLAY 300 (542)
Q Consensus 297 n~~y 300 (542)
...+
T Consensus 81 ~~~~ 84 (200)
T PF00149_consen 81 NSFY 84 (200)
T ss_dssp HHHH
T ss_pred cccc
Confidence 5433
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.86 E-value=1.2e-07 Score=87.55 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=47.3
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
++.+++|+||+...+.++++ .... ...++++||++++|..+. + .....++.++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~-~~~~---~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALE-LFGD---VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHH-HhcC---CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcC
Confidence 47899999999999999998 5433 345999999999998765 1 22345999999999754
No 36
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.76 E-value=1.3e-08 Score=90.41 Aligned_cols=145 Identities=31% Similarity=0.401 Sum_probs=112.1
Q ss_pred cccccChhHHHHHHhCccchhhhhhh---hhhhhcCCCceEEeec-eEEEeccCCCCCcCCCcccccccccccccccCCC
Q 009133 296 CTLAYGFWAELCTKFGKKDCKLVFDK---CLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSL 371 (542)
Q Consensus 296 ~n~~yGF~~E~~~ky~~~~~~~l~~~---~~~~f~~LPlaaiI~~-~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l 371 (542)
++..+|+..++..+++.. ..|.. +.++|+.||+++++.. .++|.|||+++.. .
T Consensus 3 l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~--------------------~ 59 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL--------------------D 59 (155)
T ss_pred hhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch--------------------h
Confidence 455678888877777653 24655 9999999999999988 8999999998742 1
Q ss_pred CCHHHHHhhhcccc-CCCCccccccccccCCCC--CCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCC
Q 009133 372 GSLREFAKVNRFLE-DVPENDLLSDVLWSDPSS--EAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGA 448 (542)
Q Consensus 372 ~sLddI~~i~R~~~-~p~~~~l~~DLLWSDP~~--~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r 448 (542)
..++++..+.|... .....+.+.+.+|++|.. ...|.++.+|.+..| ++.+..|+..+..+.+.|+|..
T Consensus 60 ~~~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~------- 131 (155)
T COG0639 60 RLLDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVL------- 131 (155)
T ss_pred hhHHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEE-------
Confidence 45667766666431 233556677779999885 578888899999888 8899999988888889999996
Q ss_pred CCcccccCCceeeccCCCCeEEEEecCCCCC
Q 009133 449 DDARNMLNGYSKDHDTVSGELYTLFTAPNYP 479 (542)
Q Consensus 449 ~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~ 479 (542)
+..++...+. +..+|.||+++||
T Consensus 132 -----~~~d~~~~~~---~~~lt~~~~~~~~ 154 (155)
T COG0639 132 -----YDIDTGAVFG---GGLLTAFSAPNYC 154 (155)
T ss_pred -----EecCceEEeC---CCeeeEEeccccc
Confidence 4566666551 2899999999997
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=98.73 E-value=4.2e-08 Score=93.72 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=51.6
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCc--------hHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW--------GLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~--------SlEvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
+++.+++|+||++..+.++++ ....... ..++++||++|+|+. ..+++..|..+ ...+++++||||
T Consensus 1 mri~viSD~Hg~~~~~~~~l~-~~~~~~~-d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD 74 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALE-LFAQSGA-DWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCD 74 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHH-HHHhcCC-CEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCc
Confidence 478999999999999988888 5433333 459999999999873 45566555432 236999999999
Q ss_pred ccc
Q 009133 293 TKN 295 (542)
Q Consensus 293 ~~~ 295 (542)
...
T Consensus 75 ~~~ 77 (182)
T PRK09453 75 SEV 77 (182)
T ss_pred chh
Confidence 654
No 38
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.71 E-value=1.8e-07 Score=85.24 Aligned_cols=61 Identities=30% Similarity=0.522 Sum_probs=43.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
++|.++||+|++...+.++++ ... +...+|++||++|+ .+++..+-.+ .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~-~~~---~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLE-YIN---EPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHH-HHT---TESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHH-Hhc---CCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 479999999999999999999 652 24459999999994 6666666443 6999999999544
No 39
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.63 E-value=1.1e-06 Score=81.90 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=46.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
+++.|++|+||++..+..+++ ........+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~-~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVE-LFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHH-HHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 478999999999987776665 443332334599999998 456666665432 2489999999973
No 40
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.38 E-value=4.8e-06 Score=75.62 Aligned_cols=61 Identities=18% Similarity=0.392 Sum_probs=39.8
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH--HHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--EvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
++.++||+||++. .+. .. +...+|++||++++|..+- +.+.++..++ .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~----~~~----~~-~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----TIS----IP-DGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----cCc----CC-CCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 4789999999987 222 12 2345999999999987542 2333333321 22 367899999954
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.34 E-value=1.3e-06 Score=87.82 Aligned_cols=112 Identities=14% Similarity=0.193 Sum_probs=72.3
Q ss_pred ceEEEecCCCCHHHHH-HHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccc--
Q 009133 222 EVIVVGDILGQFHDLV-ALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTL-- 298 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~-~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~-- 298 (542)
+|.++|||||++.... ..++ .. . .+.+|+.||+++ .+.+++..|..+ |..++.++||||......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~-~~--~--pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH-LL--Q--PDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh-cc--C--CCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCccccccccc
Confidence 5899999999987642 2333 22 1 245999999986 456766666544 235899999999755320
Q ss_pred -c-----------------cC------------------------hh-HHHHHHhCccchhhhhhhhhhhhcCCCceEEe
Q 009133 299 -A-----------------YG------------------------FW-AELCTKFGKKDCKLVFDKCLECFRTLPLATII 335 (542)
Q Consensus 299 -~-----------------yG------------------------F~-~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI 335 (542)
. |+ +. .++...|+.. ...+.+..+++.++.+...
T Consensus 70 ~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~---s~~eA~~~ive~~~~~~~~ 146 (238)
T cd07397 70 KKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVI---SLEESAQRIIAAAKKAPPD 146 (238)
T ss_pred chHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCC---CHHHHHHHHHHHhhhcCCC
Confidence 0 00 11 2566667633 4566677777777643333
Q ss_pred eceEEEeccCCCC
Q 009133 336 AQGVYTTHGGLFR 348 (542)
Q Consensus 336 ~~~il~vHGGIs~ 348 (542)
...||+.|+|+.-
T Consensus 147 ~~~VliaH~~~~G 159 (238)
T cd07397 147 LPLILLAHNGPSG 159 (238)
T ss_pred CCeEEEeCcCCcC
Confidence 4589999999853
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.31 E-value=4.6e-06 Score=72.01 Aligned_cols=67 Identities=31% Similarity=0.454 Sum_probs=49.1
Q ss_pred EEEecCCCCHHHHHHHH--HHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 224 IVVGDILGQFHDLVALF--EENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 224 ~VIGDIHG~~~dL~~il--~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
+++||+|+......... . .... .....+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~-~~~~-~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAA-LAAA-EKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHH-Hhcc-cCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37899999998888764 2 1122 233459999999999998887766533333455667999999999
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.21 E-value=2.6e-05 Score=73.26 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=44.2
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCch-HHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-lEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
|.++||+||++..+.. . ..... ..+.+|+.||++++|... .+.+..|. ..+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~-~~~~~-~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--I-ILKAE-EADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--H-Hhhcc-CCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 2 12212 224599999999999774 33332222 23445899999999754
No 44
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.10 E-value=7.5e-06 Score=81.80 Aligned_cols=71 Identities=14% Similarity=0.128 Sum_probs=54.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
.+|.+++||||++..|.++++ .......+ .+|++||++++|+..-++..++-.+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~-~~~~~~~D-~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVG-LAPETGAD-AIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHH-HHhhcCCC-EEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 579999999999999999998 54322233 49999999999976666666665553 2233689999999975
No 45
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=97.92 E-value=0.00042 Score=66.65 Aligned_cols=59 Identities=22% Similarity=0.320 Sum_probs=40.5
Q ss_pred ceEEEecCC-CCHH-----HHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 222 EVIVVGDIL-GQFH-----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 222 ~i~VIGDIH-G~~~-----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
.|.||+|+| |+-. .+.++++ . . .-..++.+||+++ .+++.+|..+. + .++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~-~---~-~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLV-P---G-KIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhc-c---C-CCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 378999999 6543 3555555 2 2 2235999999987 66666664442 2 589999999963
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.85 E-value=7.5e-05 Score=74.64 Aligned_cols=71 Identities=11% Similarity=0.183 Sum_probs=46.7
Q ss_pred CceEEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEeCCcccc-------CCchHHHHHHHHHhhhcCCCeEEEe
Q 009133 221 SEVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDK-------GSWGLEVLLVLLAWKVLMPHRVYLL 287 (542)
Q Consensus 221 ~~i~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDR-------G~~SlEvL~lL~~LK~~~P~~v~lL 287 (542)
+++++++|+|... ..+.+.++ ... .....++++||++|. .+...+++..|..++. .+-.++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~-~~~--~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v 76 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLR-GEA--RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFM 76 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHH-hhh--ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEE
Confidence 4789999999542 23555554 221 123459999999985 2334566666666652 33479999
Q ss_pred cCCccccc
Q 009133 288 RGNHETKN 295 (542)
Q Consensus 288 RGNHE~~~ 295 (542)
+||||...
T Consensus 77 ~GNHD~~~ 84 (241)
T PRK05340 77 HGNRDFLL 84 (241)
T ss_pred eCCCchhh
Confidence 99999643
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.81 E-value=7.8e-05 Score=74.13 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=41.5
Q ss_pred EEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEeCCccccC-----Cc--hHHHHHHHHHhhhcCCCeEEEecCC
Q 009133 224 IVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKG-----SW--GLEVLLVLLAWKVLMPHRVYLLRGN 290 (542)
Q Consensus 224 ~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-----~~--SlEvL~lL~~LK~~~P~~v~lLRGN 290 (542)
++++|+|... ..+.+.+.+... ....++++||++|.. +. ..++...|..++. .+..++++.||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~---~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GN 77 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEAR---KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGN 77 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhc---cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCC
Confidence 6899999542 234455541222 234599999999952 11 1344555555542 34579999999
Q ss_pred cccc
Q 009133 291 HETK 294 (542)
Q Consensus 291 HE~~ 294 (542)
||..
T Consensus 78 HD~~ 81 (231)
T TIGR01854 78 RDFL 81 (231)
T ss_pred Cchh
Confidence 9964
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.76 E-value=0.00087 Score=64.54 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=42.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
++|.|++|+||...+..+..+ ..... +-..+|.+||++..+..- .+......+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~-~~~~~-~~d~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALK-IFNLE-KVDAVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHH-Hhhhc-CCCEEEECCCcCCccchH--------HhhcccccceEEEEccCCCcc
Confidence 579999999999965444444 22222 334599999999865531 111112468999999988654
No 49
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.70 E-value=3.5e-05 Score=72.08 Aligned_cols=68 Identities=21% Similarity=0.103 Sum_probs=46.3
Q ss_pred eEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
+.+++|||+....+...+.+..... +.+.+++.||+++++.....+. ++ .. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~-~~d~li~~GDi~~~~~~~~~~~-~~-~~-~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAP-DADILVLAGDIGYLTDAPRFAP-LL-LA-LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCC-CCCEEEECCCCCCCcchHHHHH-HH-Hh-hcCCccEEEeCCCcceE
Confidence 4589999999877766542022222 3345999999999987765544 22 22 23455799999999985
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.68 E-value=0.0021 Score=63.31 Aligned_cols=69 Identities=20% Similarity=0.173 Sum_probs=39.5
Q ss_pred ceEEEecCCCCHH----HHHH----HHHHhcCCCCCCceEEEeCCccccCCch--HHHHHHHH-HhhhcCCCeEEEecCC
Q 009133 222 EVIVVGDILGQFH----DLVA----LFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLLVLL-AWKVLMPHRVYLLRGN 290 (542)
Q Consensus 222 ~i~VIGDIHG~~~----dL~~----il~~~~g~p~~~~~~VFLGDyVDRG~~S--lEvL~lL~-~LK~~~P~~v~lLRGN 290 (542)
++.++||+|-... .+.. +.+ ...... -..+|++||++|.|... .+.+.-++ .+. ..+--++.++||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~-~~~~~~-~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GN 78 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVD-NAEALN-IAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGN 78 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHH-HHHHcC-CCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCC
Confidence 4789999995322 2322 233 221112 24589999999999833 33332222 221 123348899999
Q ss_pred ccc
Q 009133 291 HET 293 (542)
Q Consensus 291 HE~ 293 (542)
||.
T Consensus 79 HD~ 81 (214)
T cd07399 79 HDL 81 (214)
T ss_pred Ccc
Confidence 994
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.64 E-value=0.0001 Score=71.76 Aligned_cols=71 Identities=24% Similarity=0.225 Sum_probs=48.7
Q ss_pred CceEEEecCCCCHH----HHHHHHHHhcCCCCCCceEEEeCCccccCCchH-HHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 221 SEVIVVGDILGQFH----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-EVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 221 ~~i~VIGDIHG~~~----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-EvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
.++.+++|+|+... .+.++++ ...... .+.+++.||++|.+.... ++..++-.+ ..+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~-~~~~~~-~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVE-KINALK-PDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHH-HHhccC-CCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 57999999998743 5666666 332222 235899999999988775 444444333 23456999999999754
No 52
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.62 E-value=0.00037 Score=63.45 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=37.9
Q ss_pred EEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 225 VVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 225 VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
|++|+||..+.+.++.. . ... -+.++++||+. .+++..+..++ ...++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~-~--~~~-~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 2 VISDTESPALYSPEIKV-R--LEG-VDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred eeccccCccccchHHHh-h--CCC-CCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 89999999887777666 3 222 23599999984 24445554431 224889999999
No 53
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.62 E-value=0.00051 Score=62.43 Aligned_cols=42 Identities=24% Similarity=0.327 Sum_probs=27.2
Q ss_pred ceEEEeCCccccCCch-HHH-HHHHHHhhhcCCCeEEEecCCccc
Q 009133 251 RYFVFNGNYVDKGSWG-LEV-LLVLLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~S-lEv-L~lL~~LK~~~P~~v~lLRGNHE~ 293 (542)
..++++||+++.|... .+. ..++-.++... ..+++++||||.
T Consensus 37 d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 37 DLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 4599999999998752 222 22333332111 269999999996
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.55 E-value=0.00027 Score=72.14 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=47.8
Q ss_pred CCceEEEecCCCC----HHHHHHHHHHhcCCCCCCceEEEeCCccccC--CchHHHHHHHHHhhhcCCCeEEEecCCccc
Q 009133 220 DSEVIVVGDILGQ----FHDLVALFEENAGFPSDHRYFVFNGNYVDKG--SWGLEVLLVLLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 220 ~~~i~VIGDIHG~----~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG--~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~ 293 (542)
+.+|..++|+|.. ...+.++++ ....... +.+++.|||+|.+ ...-++...|-.++... .+|.+.||||.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~-~i~~~~p-DlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIA-LGIEQKP-DLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHH-HHHhcCC-CEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCc
Confidence 4689999999976 455677776 3322222 3599999999954 22234455555565434 49999999996
Q ss_pred c
Q 009133 294 K 294 (542)
Q Consensus 294 ~ 294 (542)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 55
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.31 E-value=0.00089 Score=63.37 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=42.4
Q ss_pred eEEEecCCCCHHHH---------------HHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEe
Q 009133 223 VIVVGDILGQFHDL---------------VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL 287 (542)
Q Consensus 223 i~VIGDIHG~~~dL---------------~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lL 287 (542)
+++++|+|=..... ..+++...........+|++||++++|..+.. +..+.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36889998655432 22333222222233569999999999987644 333332 23469999
Q ss_pred cCCccccc
Q 009133 288 RGNHETKN 295 (542)
Q Consensus 288 RGNHE~~~ 295 (542)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999765
No 56
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.24 E-value=0.00067 Score=67.61 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=46.1
Q ss_pred ceEEEecCCCCH------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 222 EVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 222 ~i~VIGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
+|.+++|+|+.+ ..|.++++ ...... -..+|+.||+++++..+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~-~~~~~~-~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQ-YLKKQK-IDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHH-HHHhcC-CCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999753 22445555 332222 345999999999877666666555443 334699999999964
No 57
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.18 E-value=0.0011 Score=62.90 Aligned_cols=45 Identities=20% Similarity=0.122 Sum_probs=27.7
Q ss_pred ceEEEeCCccccCCch--HHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 251 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
..+|++||++|..... .+....-+......+-.+++++||||...
T Consensus 43 d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 43 ERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred CEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 4599999999865432 22222101112234557999999999754
No 58
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.10 E-value=0.00079 Score=68.90 Aligned_cols=72 Identities=17% Similarity=0.263 Sum_probs=44.2
Q ss_pred eEEEecCCCCHHHHHHHHHH--hcCCCCCCceEEEeCCccccCCc-hHHHHH------HH------HHhhhcCCCeEEEe
Q 009133 223 VIVVGDILGQFHDLVALFEE--NAGFPSDHRYFVFNGNYVDKGSW-GLEVLL------VL------LAWKVLMPHRVYLL 287 (542)
Q Consensus 223 i~VIGDIHG~~~dL~~il~~--~~g~p~~~~~~VFLGDyVDRG~~-SlEvL~------lL------~~LK~~~P~~v~lL 287 (542)
|+|+||+||+++.+...++. .-... +.+.+|++||+-..+.. ..+.+. -+ +.-....|--++++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~-~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGT-KVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCC-CCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEE
Confidence 57999999999988775441 11112 33459999999654433 233221 11 11123466668999
Q ss_pred cCCccccc
Q 009133 288 RGNHETKN 295 (542)
Q Consensus 288 RGNHE~~~ 295 (542)
.||||...
T Consensus 80 ~GNHE~~~ 87 (262)
T cd00844 80 GGNHEASN 87 (262)
T ss_pred CCCCCCHH
Confidence 99999643
No 59
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.09 E-value=0.00091 Score=64.62 Aligned_cols=74 Identities=19% Similarity=0.259 Sum_probs=45.5
Q ss_pred ceEEEecCC-CCH--------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHh-hhc--CCCe
Q 009133 222 EVIVVGDIL-GQF--------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVL--MPHR 283 (542)
Q Consensus 222 ~i~VIGDIH-G~~--------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L-K~~--~P~~ 283 (542)
+++.++|+| |.. ..|.++++ .+..... ..+|+.||++|.+..+.+.+..+... +.. ..-.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVE-LAIEEKV-DFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHH-HHHhcCC-CEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 478899999 422 23555555 3322222 35999999999876555443333322 211 1346
Q ss_pred EEEecCCccccccc
Q 009133 284 VYLLRGNHETKNCT 297 (542)
Q Consensus 284 v~lLRGNHE~~~~n 297 (542)
++++.||||.....
T Consensus 79 v~~~~GNHD~~~~~ 92 (223)
T cd00840 79 VFIIAGNHDSPSRL 92 (223)
T ss_pred EEEecCCCCCcccc
Confidence 99999999976643
No 60
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.05 E-value=0.0016 Score=66.16 Aligned_cols=70 Identities=23% Similarity=0.285 Sum_probs=44.3
Q ss_pred ceEEEecCC-CC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCc----hHHHHHHHHHhhhcCCCeE
Q 009133 222 EVIVVGDIL-GQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW----GLEVLLVLLAWKVLMPHRV 284 (542)
Q Consensus 222 ~i~VIGDIH-G~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~----SlEvL~lL~~LK~~~P~~v 284 (542)
++.+++|+| +. ...|.++++...... ...+|++||+++.|.. ..+.+.-++. ..+-.+
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~--~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~---~l~~p~ 76 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRES--LDFVVQLGDIIDGDNARAEEALDAVLAILD---RLKGPV 76 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCC--CCEEEECCCeecCCCchHHHHHHHHHHHHH---hcCCCE
Confidence 578999999 21 355666666222222 2359999999999873 3333322221 223459
Q ss_pred EEecCCcccccc
Q 009133 285 YLLRGNHETKNC 296 (542)
Q Consensus 285 ~lLRGNHE~~~~ 296 (542)
+.+.||||....
T Consensus 77 ~~v~GNHD~~~~ 88 (267)
T cd07396 77 HHVLGNHDLYNP 88 (267)
T ss_pred EEecCccccccc
Confidence 999999998653
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.05 E-value=0.0016 Score=63.00 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=18.8
Q ss_pred ChhhHHHHHhHcCCeEEEEeccC
Q 009133 419 GPDCTEEFLKENHLKLIIRSHEG 441 (542)
Q Consensus 419 G~d~~~~FL~~n~l~lIIRgHe~ 441 (542)
.+..+.+.++..+.+++|-||+-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H 199 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTH 199 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCC
Confidence 34566777889999999999994
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.01 E-value=0.0016 Score=65.98 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=45.4
Q ss_pred CceEEEecCC-CC-----------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHH----HHHHHhhhcCCCeE
Q 009133 221 SEVIVVGDIL-GQ-----------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 284 (542)
Q Consensus 221 ~~i~VIGDIH-G~-----------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL----~lL~~LK~~~P~~v 284 (542)
++++.++|+| |. +..|.++++ .+.... .+.+|+.||++|+..-+.+.. .++..++...|-.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~-~~~~~~-~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLE-FAKAEQ-IDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHH-HHHHcC-CCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 4688999999 32 223444444 222222 345999999999986655433 23334433333469
Q ss_pred EEecCCccccc
Q 009133 285 YLLRGNHETKN 295 (542)
Q Consensus 285 ~lLRGNHE~~~ 295 (542)
+++.||||...
T Consensus 79 ~~i~GNHD~~~ 89 (253)
T TIGR00619 79 VVISGNHDSAQ 89 (253)
T ss_pred EEEccCCCChh
Confidence 99999999754
No 63
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.99 E-value=0.0033 Score=69.99 Aligned_cols=117 Identities=18% Similarity=0.243 Sum_probs=61.8
Q ss_pred CCCceEEEecCC-CCH----HHHHHHHHHhcCCC-------CCCceEEEeCCcccc-CCch---------------HHHH
Q 009133 219 EDSEVIVVGDIL-GQF----HDLVALFEENAGFP-------SDHRYFVFNGNYVDK-GSWG---------------LEVL 270 (542)
Q Consensus 219 ~~~~i~VIGDIH-G~~----~dL~~il~~~~g~p-------~~~~~~VFLGDyVDR-G~~S---------------lEvL 270 (542)
++..+.+++|+| |.- ..+..+++...|.. ..-..+|++||++|. |.+. -++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346899999999 653 22344444233432 223469999999995 3221 1233
Q ss_pred HHHHHhhhcCCCeEEEecCCcccccccccc-ChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEee-ceEEEeccCC
Q 009133 271 LVLLAWKVLMPHRVYLLRGNHETKNCTLAY-GFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGL 346 (542)
Q Consensus 271 ~lL~~LK~~~P~~v~lLRGNHE~~~~n~~y-GF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~-~~il~vHGGI 346 (542)
.+|-.+. ..-.|++++||||........ .+...+...+.. .-..++.. |....++ .+++++||-.
T Consensus 322 ~~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~--------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 322 EYLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE--------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc--------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 3443332 234699999999975432211 122222111111 11334444 5433334 4788899864
No 64
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.97 E-value=0.0012 Score=69.67 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=45.2
Q ss_pred CceEEEecCC-C-----------CHHHHHHHHHHhcCCCCCCceEEEeCCccccC-CchHHHHHHHHH--hh--hcCCCe
Q 009133 221 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLA--WK--VLMPHR 283 (542)
Q Consensus 221 ~~i~VIGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~--LK--~~~P~~ 283 (542)
++++.++|+| | +...|.++++ .+.... -+.+|+.||++|+. +.+.+++.++.. ++ ...+-.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~-~a~~~~-vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIE-YSKAHG-ITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHH-HHHHcC-CCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 4788999999 4 2334455554 332222 24599999999985 445555444322 11 123457
Q ss_pred EEEecCCccccc
Q 009133 284 VYLLRGNHETKN 295 (542)
Q Consensus 284 v~lLRGNHE~~~ 295 (542)
|+++.||||...
T Consensus 79 v~~I~GNHD~~~ 90 (340)
T PHA02546 79 LHVLVGNHDMYY 90 (340)
T ss_pred EEEEccCCCccc
Confidence 999999999743
No 65
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=96.85 E-value=0.0032 Score=64.09 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=45.5
Q ss_pred CceEEEecCC-C-----------CHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEec
Q 009133 221 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (542)
Q Consensus 221 ~~i~VIGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLR 288 (542)
.++..++|+| . ....|.++++........-..+|+.||++|.|.. +-+..+...-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEeC
Confidence 5799999999 1 2456777776232333333459999999998852 222222222123345699999
Q ss_pred CCcccc
Q 009133 289 GNHETK 294 (542)
Q Consensus 289 GNHE~~ 294 (542)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 66
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=96.84 E-value=0.0037 Score=61.53 Aligned_cols=70 Identities=27% Similarity=0.388 Sum_probs=43.6
Q ss_pred ceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCch-HHHHHHHHHhhhcCCCeEEEec
Q 009133 222 EVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVLLVLLAWKVLMPHRVYLLR 288 (542)
Q Consensus 222 ~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-lEvL~lL~~LK~~~P~~v~lLR 288 (542)
++.+++|+|=. ...|.++++......+....+|++||+++.|... .+-+.-++ ...+-.++.++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~~~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELL---AALPIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHH---hhcCCCEEEeC
Confidence 47899999943 3456666663333322334599999999987642 22222221 12244689999
Q ss_pred CCcccc
Q 009133 289 GNHETK 294 (542)
Q Consensus 289 GNHE~~ 294 (542)
||||..
T Consensus 78 GNHD~~ 83 (240)
T cd07402 78 GNHDDR 83 (240)
T ss_pred CCCCCH
Confidence 999964
No 67
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.52 E-value=0.0052 Score=66.65 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=48.4
Q ss_pred CceEEEecCC-CC-H------HH----HHHHHHHhcCCCCCCceEEEeCCccccCCchHHHH----HHHHHhhhcCCCeE
Q 009133 221 SEVIVVGDIL-GQ-F------HD----LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 284 (542)
Q Consensus 221 ~~i~VIGDIH-G~-~------~d----L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL----~lL~~LK~~~P~~v 284 (542)
++++.++|+| |. + .+ |..+.+ .+.... .+.+|+.||++|++..+.+.. .++..++. .+-.+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~-~i~~~~-~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLE-QVQEHQ-VDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHH-HHHhcC-CCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcE
Confidence 4688999999 42 1 11 223333 222222 335999999999986654332 22333432 23469
Q ss_pred EEecCCccccccccccChhHHHHHHhC
Q 009133 285 YLLRGNHETKNCTLAYGFWAELCTKFG 311 (542)
Q Consensus 285 ~lLRGNHE~~~~n~~yGF~~E~~~ky~ 311 (542)
+++.||||...- ..+..++....|
T Consensus 78 ~~I~GNHD~~~~---l~~~~~~l~~~g 101 (407)
T PRK10966 78 VVLAGNHDSVAT---LNESRDLLAFLN 101 (407)
T ss_pred EEEcCCCCChhh---hhhHHHHHHHCC
Confidence 999999997542 223344444443
No 68
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.39 E-value=0.0097 Score=59.31 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=39.5
Q ss_pred eEEEecCCCC---------HH----HHHH-HHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEec
Q 009133 223 VIVVGDILGQ---------FH----DLVA-LFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (542)
Q Consensus 223 i~VIGDIHG~---------~~----dL~~-il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLR 288 (542)
|+++.|||-. +. ++.+ +.+.....-++.+.+|+.||+++++... +....+-.++. .|..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 22 3333 3331112212344589999999987643 32222222332 233489999
Q ss_pred CCccc
Q 009133 289 GNHET 293 (542)
Q Consensus 289 GNHE~ 293 (542)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 69
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=96.30 E-value=0.0085 Score=57.91 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=43.4
Q ss_pred CceEEEecCCCCHH-----------HHHHHHHHhcCCCCCCceEEEeCCccccCCc---hHHHHHHHHHhhhcCCCeEEE
Q 009133 221 SEVIVVGDILGQFH-----------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW---GLEVLLVLLAWKVLMPHRVYL 286 (542)
Q Consensus 221 ~~i~VIGDIHG~~~-----------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~---SlEvL~lL~~LK~~~P~~v~l 286 (542)
.++.+++|+|-... ...+.+++...... ...+|++||+++.+.. +.+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEK-PDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcC-CCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 46899999996222 11222321222222 2459999999997765 355555555433333446899
Q ss_pred ecCCcc
Q 009133 287 LRGNHE 292 (542)
Q Consensus 287 LRGNHE 292 (542)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 70
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.30 E-value=0.022 Score=56.92 Aligned_cols=70 Identities=16% Similarity=0.241 Sum_probs=38.9
Q ss_pred EEEecCC--CCH---HHHHHHHHHhcCCCC---CCceEEEeCCccccCCc---------------hHH-HHHHHHHhhhc
Q 009133 224 IVVGDIL--GQF---HDLVALFEENAGFPS---DHRYFVFNGNYVDKGSW---------------GLE-VLLVLLAWKVL 279 (542)
Q Consensus 224 ~VIGDIH--G~~---~dL~~il~~~~g~p~---~~~~~VFLGDyVDRG~~---------------SlE-vL~lL~~LK~~ 279 (542)
++|+|+| +.. ..+..+++...+... .-..+|++||++|+... ..+ +..++-.+ .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~ 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDV--P 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhc--c
Confidence 5789999 432 222333332234322 23469999999998310 111 22222223 2
Q ss_pred CCCeEEEecCCccccc
Q 009133 280 MPHRVYLLRGNHETKN 295 (542)
Q Consensus 280 ~P~~v~lLRGNHE~~~ 295 (542)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2356999999999753
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.20 E-value=0.0074 Score=56.79 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=28.0
Q ss_pred ceEEEeCCccccCCchH-H----HHHHHHHhhhcC-CCeEEEecCCccccc
Q 009133 251 RYFVFNGNYVDKGSWGL-E----VLLVLLAWKVLM-PHRVYLLRGNHETKN 295 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~Sl-E----vL~lL~~LK~~~-P~~v~lLRGNHE~~~ 295 (542)
+.+|++||++|.|..+. + .+..+..+.... +-.++++.||||...
T Consensus 40 d~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 40 DVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 45999999999886532 2 122222221112 246999999999744
No 72
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.16 E-value=0.17 Score=50.72 Aligned_cols=217 Identities=18% Similarity=0.142 Sum_probs=117.4
Q ss_pred CCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCcc--ccCCchHHHHH-HHHHhhhcCCCeEEEecCCcccccc
Q 009133 220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYV--DKGSWGLEVLL-VLLAWKVLMPHRVYLLRGNHETKNC 296 (542)
Q Consensus 220 ~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyV--DRG~~SlEvL~-lL~~LK~~~P~~v~lLRGNHE~~~~ 296 (542)
.+++..+.|+||.++.+.+++. .+.....+ .+|+.||+. +.|+.-.-.-. .+-.++ ..--.|+.+.||-|...+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~-~~~~~~~D-~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v 79 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLN-AAADIRAD-LLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEV 79 (226)
T ss_pred cceEEEEeccccchHHHHHHHH-HHhhccCC-EEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHH
Confidence 3689999999999999999998 66544333 489999999 88775322111 133443 334579999999776552
Q ss_pred ccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHH
Q 009133 297 TLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLRE 376 (542)
Q Consensus 297 n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLdd 376 (542)
-. ....++.. +.. + .--+++-.||-=||..+++.-+| .--+-++
T Consensus 80 ~~-------~l~~~~~~----v~~---~-------v~~i~~~~~~G~Ggsn~tp~nt~---------------~e~~E~~ 123 (226)
T COG2129 80 ID-------VLKNAGVN----VHG---R-------VVEIGGYGFVGFGGSNPTPFNTP---------------REFSEDE 123 (226)
T ss_pred HH-------HHHhcccc----ccc---c-------eEEecCcEEEEecccCCCCCCCc---------------cccCHHH
Confidence 21 12222221 111 0 11233444555577766542222 1124455
Q ss_pred HHhhhccccCCCCcccccccccc--CCCCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccc
Q 009133 377 FAKVNRFLEDVPENDLLSDVLWS--DPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNM 454 (542)
Q Consensus 377 I~~i~R~~~~p~~~~l~~DLLWS--DP~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v 454 (542)
|....+.......+..- +|-. -|-... ..++-| -.--|..+++++.++.+-.+.|.||=--
T Consensus 124 I~s~l~~~v~~~~~~~~--Il~~HaPP~gt~--~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHE------------ 186 (226)
T COG2129 124 IYSKLKSLVKKADNPVN--ILLTHAPPYGTL--LDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHE------------ 186 (226)
T ss_pred HHHHHHHHHhcccCcce--EEEecCCCCCcc--ccCCCC-ccccchHHHHHHHHHhCCceEEEeeecc------------
Confidence 55444333221111000 2211 121111 011122 1345889999999999999999998631
Q ss_pred cCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133 455 LNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (542)
Q Consensus 455 ~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f 506 (542)
..|.+.- | =||+-.|.-. +.-..|++.++.. ..+..+|
T Consensus 187 s~G~d~i-----G--~TivVNPG~~----~~g~yA~i~l~~~---~Vk~~~~ 224 (226)
T COG2129 187 SRGIDKI-----G--NTIVVNPGPL----GEGRYALIELEKE---VVKLEQF 224 (226)
T ss_pred ccccccc-----C--CeEEECCCCc----cCceEEEEEecCc---EEEEEEe
Confidence 2444321 2 2667666643 2345677777654 3445554
No 73
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.16 E-value=0.015 Score=58.21 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=40.6
Q ss_pred CceEEEecCC-CCHHHHH------------HHHHH---hcCCCCCCceEEEeCCccccCCch--H-HHHHHHHHhhhcCC
Q 009133 221 SEVIVVGDIL-GQFHDLV------------ALFEE---NAGFPSDHRYFVFNGNYVDKGSWG--L-EVLLVLLAWKVLMP 281 (542)
Q Consensus 221 ~~i~VIGDIH-G~~~dL~------------~il~~---~~g~p~~~~~~VFLGDyVDRG~~S--l-EvL~lL~~LK~~~P 281 (542)
+++.||+|+| |.-..+. +.++. ...... -..+|++||.++....+ . ++..++-.+ .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~-~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~ 89 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYG-IEALIINGDLKHEFKKGLEWRFIREFIEVT----F 89 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcC-CCEEEEcCccccccCChHHHHHHHHHHHhc----C
Confidence 4688999999 6433222 22331 222222 24599999999765543 2 222233222 2
Q ss_pred CeEEEecCCccccc
Q 009133 282 HRVYLLRGNHETKN 295 (542)
Q Consensus 282 ~~v~lLRGNHE~~~ 295 (542)
..+++++||||...
T Consensus 90 ~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 90 RDLILIRGNHDALI 103 (225)
T ss_pred CcEEEECCCCCCcc
Confidence 37999999999654
No 74
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.13 E-value=0.014 Score=63.41 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=41.1
Q ss_pred CCCceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHh
Q 009133 219 EDSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW 276 (542)
Q Consensus 219 ~~~~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L 276 (542)
+.++|..++|+|-- +..|.++++ .+..... +.+|+.||++|++.-|.+++..++.+
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~-~a~~~~v-D~VLiaGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQ-IAKEQDV-DMILLGGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHH-HHHHcCC-CEEEECCccCCCCCCCHHHHHHHHHH
Confidence 34789999999932 456677777 5543333 45999999999999998888665543
No 75
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=96.11 E-value=0.00054 Score=72.94 Aligned_cols=218 Identities=11% Similarity=-0.141 Sum_probs=132.0
Q ss_pred CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhc
Q 009133 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (542)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~ 327 (542)
+.....|+++++++++.++++.+-+-+..+..+-.++...++|| +..++++.++...-.......+++..++-+.
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~-----~~~~~~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCH-----GDSSFKRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhc-----cCcchhhhheeecccccCceEEEEeccCcCc
Confidence 34445899999999999999999999999999988999999999 4445666666544444445567888899999
Q ss_pred CCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCc
Q 009133 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (542)
Q Consensus 328 ~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~ 407 (542)
..+.+++.+ ++++.||+.+|...-.. ...+..+.++-+ .....+. |-++-+..++
T Consensus 121 ~~l~k~i~~-~il~~~~l~~Pht~hcl----------a~g~v~vs~lGd-------------~~gn~kg-~f~llD~~~~ 175 (476)
T KOG0918|consen 121 PSLEKTIDP-DILEKTGLACPHTSHCL----------ASGNVMVSCLGD-------------AEGNAKG-GFLLLDSDFN 175 (476)
T ss_pred cceeeeech-hhHhhcCCcCCcccccc----------cCCCeeEEeecc-------------cccCCcC-CeEEecCccc
Confidence 999987755 99999999987541000 000001111110 0000111 2222222211
Q ss_pred ccc---cCCCeeeeChhh--HHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCC
Q 009133 408 REN---TKKFGLLWGPDC--TEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVD 482 (542)
Q Consensus 408 ~~n---~RG~G~~FG~d~--~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~ 482 (542)
..+ ++|...+||.|. .-+++..-+.++..+.|. ..||...| ++++ .+.|+++-|. -
T Consensus 176 ~k~tw~~~~~~p~~gyDfwyqpr~~~mIstewgap~~~--------------~~gf~~~~-v~d~--lyg~~lhvy~--w 236 (476)
T KOG0918|consen 176 EKGTWEKPGHSPLFGYDFWYQPRHNVMISTEWGAPNAL--------------RKGFNPAD-VEDG--LYGSHLHVYQ--W 236 (476)
T ss_pred eecccccCCCccccccceeeccccceEEeecccCchhh--------------hcCCChhH-hhcc--ceeeeeEEEe--c
Confidence 111 123333344332 223444444556666666 57887776 3445 8889998886 3
Q ss_pred CCCCceEEEEEeCCCCCCCeEEEecCCCCCCC
Q 009133 483 GFDNVGAYAVLKPPLFDSPLFLQLKAAEKPEV 514 (542)
Q Consensus 483 ~~~N~gA~l~l~~~~~~~p~f~~f~~~~p~~~ 514 (542)
..+|.++.+.+..+.....+..-...|+++.-
T Consensus 237 ~~~~~~QtidL~~~gllpleiRfLh~p~~~~~ 268 (476)
T KOG0918|consen 237 SPGELKQTIDLGDTGLLPLEIRFLHNPSKATG 268 (476)
T ss_pred CCccceeEEecCCCCcceEEeeeccCCCcccc
Confidence 56788888888765533333333333776665
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.06 E-value=0.015 Score=54.80 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=48.3
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 224 ~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
.||||+||+++.+..-++........=+.+|++||+..-...+-+ +.-++.-....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 389999999999988777222222233458999999976555533 44444445577878999999998
No 77
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.04 E-value=0.38 Score=49.10 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=21.3
Q ss_pred eChhhHHHHHhHcCCeEEEEecc
Q 009133 418 WGPDCTEEFLKENHLKLIIRSHE 440 (542)
Q Consensus 418 FG~d~~~~FL~~n~l~lIIRgHe 440 (542)
-.++.++..|++.+-.+|.-||.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 57889999999999999999999
No 78
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=95.77 E-value=0.034 Score=55.93 Aligned_cols=74 Identities=14% Similarity=0.035 Sum_probs=43.4
Q ss_pred CceEEEecCCCCH----------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH---HHHHHH-HHhhhc-
Q 009133 221 SEVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL---EVLLVL-LAWKVL- 279 (542)
Q Consensus 221 ~~i~VIGDIHG~~----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl---EvL~lL-~~LK~~- 279 (542)
-++++++|+|--. ..|.++++......+....+|++||+++.|...- +....+ -.++..
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3578888888663 1345555522233233446999999999987641 111111 112211
Q ss_pred CCCeEEEecCCcccc
Q 009133 280 MPHRVYLLRGNHETK 294 (542)
Q Consensus 280 ~P~~v~lLRGNHE~~ 294 (542)
.+-.++.+.||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 234599999999974
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=95.69 E-value=0.027 Score=57.29 Aligned_cols=70 Identities=17% Similarity=0.179 Sum_probs=40.9
Q ss_pred CceEEEecCCC----CHHHHHHHHHHhcCCCCCCceEEEeCCcccc-CCc---hHHHHHHH-HHhhhcCCCeEEEecCCc
Q 009133 221 SEVIVVGDILG----QFHDLVALFEENAGFPSDHRYFVFNGNYVDK-GSW---GLEVLLVL-LAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 221 ~~i~VIGDIHG----~~~dL~~il~~~~g~p~~~~~~VFLGDyVDR-G~~---SlEvL~lL-~~LK~~~P~~v~lLRGNH 291 (542)
-++.|+||.|. ....+.++.+ . ...-..+|++||+++- |.. ..+.+.-. -.+....| ++.++|||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~-~---~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNH 78 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEK-E---LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNH 78 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHh-c---cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccc
Confidence 47999999995 3333333333 2 2233458999999954 432 22222222 22222334 88999999
Q ss_pred ccccc
Q 009133 292 ETKNC 296 (542)
Q Consensus 292 E~~~~ 296 (542)
|....
T Consensus 79 D~~~~ 83 (294)
T cd00839 79 EADYN 83 (294)
T ss_pred ccccC
Confidence 98653
No 80
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=95.37 E-value=0.054 Score=54.00 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=47.8
Q ss_pred ceEEEecCCCC------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCc-hHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 222 EVIVVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW-GLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 222 ~i~VIGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~-SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
++..|+|+|-- ...+..+++ ....... +.+|+.||+.++|.. +.+-+..++. +...|..+++++||||.+
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~-~i~~~~~-D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLA-AIEQLKP-DLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHH-HHhcCCC-CEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCC
Confidence 57899999977 234445555 4443433 459999999999643 2222222222 236677899999999987
Q ss_pred ccc
Q 009133 295 NCT 297 (542)
Q Consensus 295 ~~n 297 (542)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 744
No 81
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.06 E-value=0.054 Score=54.90 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=39.4
Q ss_pred eEEEecCCCCHH------HH-HHHHHHhcCCCCCCceEEEeCCccccCCch--------H---HHHHHHHHhhhcCCCeE
Q 009133 223 VIVVGDILGQFH------DL-VALFEENAGFPSDHRYFVFNGNYVDKGSWG--------L---EVLLVLLAWKVLMPHRV 284 (542)
Q Consensus 223 i~VIGDIHG~~~------dL-~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--------l---EvL~lL~~LK~~~P~~v 284 (542)
++.++|+|-... .. ..+++ ...... ...+|++||++|++... . +.+..+..+....+..+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~-~i~~~~-pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSN-FIDVIK-PALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHH-HHHhhC-CCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 467899995221 11 22333 221112 23599999999986521 1 12222222223335679
Q ss_pred EEecCCccccc
Q 009133 285 YLLRGNHETKN 295 (542)
Q Consensus 285 ~lLRGNHE~~~ 295 (542)
+.++||||...
T Consensus 80 ~~v~GNHD~~~ 90 (256)
T cd07401 80 FDIRGNHDLFN 90 (256)
T ss_pred EEeCCCCCcCC
Confidence 99999999853
No 82
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.03 E-value=0.04 Score=54.93 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=41.8
Q ss_pred ceEEEecCCCCH---------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH-----HHHHHHHHhhhcCCCeEEEe
Q 009133 222 EVIVVGDILGQF---------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLL 287 (542)
Q Consensus 222 ~i~VIGDIHG~~---------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~v~lL 287 (542)
+|+.++|+||.+ ..+..+++ .......+..+|..||+++.+..+- .++..|-++ -. .+ +.
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~-~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g~-d~-~~ 75 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIK-EERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---GY-DA-VT 75 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHH-HHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---CC-CE-Ee
Confidence 478999999887 45566666 3222223445788999999887753 344433332 22 33 44
Q ss_pred cCCcccc
Q 009133 288 RGNHETK 294 (542)
Q Consensus 288 RGNHE~~ 294 (542)
.||||..
T Consensus 76 ~GNHe~d 82 (252)
T cd00845 76 IGNHEFD 82 (252)
T ss_pred ecccccc
Confidence 5999953
No 83
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.92 E-value=0.086 Score=53.27 Aligned_cols=101 Identities=19% Similarity=0.261 Sum_probs=57.3
Q ss_pred EEecCCCC------HHHHHHHHHHhcCCCCCCceEEEeCCcccc--CCc-----hHHHHHHHHHhhhcCCCeEEEecCCc
Q 009133 225 VVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDK--GSW-----GLEVLLVLLAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 225 VIGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDR--G~~-----SlEvL~lL~~LK~~~P~~v~lLRGNH 291 (542)
.|+|+|=. -+-|+..++ ...++...+.++||++|- |.. --+|...|..+ .....+||.+.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~---~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLR---EEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHH---hccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCch
Confidence 57888843 344555665 222344559999999972 322 23455555444 35567899999999
Q ss_pred cccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEe---eceEEEeccCCCCC
Q 009133 292 ETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATII---AQGVYTTHGGLFRR 349 (542)
Q Consensus 292 E~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI---~~~il~vHGGIs~~ 349 (542)
+... ...+ ....| .+.-+|-..++ +.+++++||-....
T Consensus 78 Dfll-~~~f------~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t 118 (237)
T COG2908 78 DFLL-GKRF------AQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCT 118 (237)
T ss_pred HHHH-HHHH------HhhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccc
Confidence 9333 2211 11111 12223333333 57999999987653
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=94.86 E-value=0.039 Score=52.77 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=28.3
Q ss_pred ceEEEeCCccccCCchH--H---HHHHHHHhhh-c----CCCeEEEecCCccccc
Q 009133 251 RYFVFNGNYVDKGSWGL--E---VLLVLLAWKV-L----MPHRVYLLRGNHETKN 295 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~Sl--E---vL~lL~~LK~-~----~P~~v~lLRGNHE~~~ 295 (542)
+.+||+||++|.|.... + .+..+..+.. . ..-.++++.||||...
T Consensus 47 d~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 47 DVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 35999999999887532 2 2222222211 1 1346999999999764
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=94.63 E-value=0.05 Score=53.55 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=30.3
Q ss_pred ceEEEeCCccccCCch--HHHHHHHHHhhhcCC----CeEEEecCCcccc
Q 009133 251 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMP----HRVYLLRGNHETK 294 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P----~~v~lLRGNHE~~ 294 (542)
+.+||+||++|.|+.+ .|....+-.++-.++ -.++.+.||||--
T Consensus 44 D~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 44 DIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3489999999999964 235555544443222 3588999999954
No 86
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.05 E-value=0.11 Score=52.60 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=42.7
Q ss_pred CceEEEecCCCCHHHHH----------------HHHHHhcCCCCCCceEEEeCCccccCCc-----hHHHHHHHHHhhhc
Q 009133 221 SEVIVVGDILGQFHDLV----------------ALFEENAGFPSDHRYFVFNGNYVDKGSW-----GLEVLLVLLAWKVL 279 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~----------------~il~~~~g~p~~~~~~VFLGDyVDRG~~-----SlEvL~lL~~LK~~ 279 (542)
.++.|+.|+|=-|..-+ +.+.+... ....+.+|.|||.-.-.+. ..|+..++-.++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~-~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIE-RYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHH-hcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 68999999995443322 22221111 1123459999999854333 34555554444322
Q ss_pred CCCeEEEecCCccccc
Q 009133 280 MPHRVYLLRGNHETKN 295 (542)
Q Consensus 280 ~P~~v~lLRGNHE~~~ 295 (542)
.+++++|||+...
T Consensus 99 ---evi~i~GNHD~~i 111 (235)
T COG1407 99 ---EVIIIRGNHDNGI 111 (235)
T ss_pred ---cEEEEeccCCCcc
Confidence 4999999999766
No 87
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=93.85 E-value=0.11 Score=51.16 Aligned_cols=67 Identities=15% Similarity=0.060 Sum_probs=41.3
Q ss_pred cCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHH-HHHHHHhhhcC---------------------CCeEE
Q 009133 228 DILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV-LLVLLAWKVLM---------------------PHRVY 285 (542)
Q Consensus 228 DIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv-L~lL~~LK~~~---------------------P~~v~ 285 (542)
|++|+=.=|.++++ ..-+.-..+.++||||++|.|--+-+- -...-.++-.+ .-.++
T Consensus 24 d~~~~D~YL~~~~~-~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 24 DLFGNDYFLGHIVS-MMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred hhhhhHHHHHHHHH-HHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 55677677888888 444444445589999999997433222 12222222211 13578
Q ss_pred EecCCccccc
Q 009133 286 LLRGNHETKN 295 (542)
Q Consensus 286 lLRGNHE~~~ 295 (542)
++.||||--.
T Consensus 103 ~V~GNHDIG~ 112 (193)
T cd08164 103 NIAGNHDVGY 112 (193)
T ss_pred EECCcccCCC
Confidence 9999999743
No 88
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=93.10 E-value=0.23 Score=51.62 Aligned_cols=72 Identities=24% Similarity=0.308 Sum_probs=46.9
Q ss_pred CCceEEEecCCCCHHH--HHHHHHHhcCCCCCCceEEEeCCcccc-CCchHHHHH-HHHHhhhcCCCeEEEecCCccccc
Q 009133 220 DSEVIVVGDILGQFHD--LVALFEENAGFPSDHRYFVFNGNYVDK-GSWGLEVLL-VLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 220 ~~~i~VIGDIHG~~~d--L~~il~~~~g~p~~~~~~VFLGDyVDR-G~~SlEvL~-lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
+-+|+-+.|+|-.... ..+.+.......+ +-+++.|||+|+ .+...+.+. .|..| ..|-.+|.+.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~--DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELP--DLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCC--CEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccc
Confidence 3578999999987655 2222221222222 569999999996 665555444 44445 45567999999998755
No 89
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.07 E-value=0.33 Score=52.73 Aligned_cols=57 Identities=23% Similarity=0.422 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCCCCCceEEEeCCccccCCch--HHHHHHHHHhhhcCCC----eEEEecCCccc
Q 009133 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMPH----RVYLLRGNHET 293 (542)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P~----~v~lLRGNHE~ 293 (542)
|.+.|+ ...+.-+.+..+||||++|-|.+. -|=-.....+|..++. .+..+.||||-
T Consensus 81 lrr~f~-~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFD-MSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHH-HHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 445666 555555556689999999999885 3333444555555553 68899999994
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=91.89 E-value=0.28 Score=49.95 Aligned_cols=42 Identities=14% Similarity=0.349 Sum_probs=25.5
Q ss_pred ceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEeCCccccCC
Q 009133 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (542)
Q Consensus 222 ~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (542)
+|+.++|+||++. .|..+++ .......+..+|..||+++..+
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~-~~r~~~~~~l~ld~GD~~~gs~ 59 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIK-KARAENPNTLLIDNGDTIQGSP 59 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHH-HHHhcCCCeEEEeCCccCCccH
Confidence 4788999999973 3555555 2222122332333799998665
No 91
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=91.43 E-value=0.28 Score=49.60 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=43.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHH-------------------------HHHHHHH
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE-------------------------VLLVLLA 275 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE-------------------------vL~lL~~ 275 (542)
.+|.+++|.||+++.|.++.+ .+.....+. +||+||++--+..+-| .+.-.+.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~-~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVE-VIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHH-HHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHh-hccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 479999999999999999887 544334444 9999999865544433 3333333
Q ss_pred hhhcCCCeEEEecCCccccc
Q 009133 276 WKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 276 LK~~~P~~v~lLRGNHE~~~ 295 (542)
..-..+--++.++||||...
T Consensus 84 ~L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 84 ILGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHCC-SEEEEE--TTS-SH
T ss_pred HHHhcCCcEEEecCCCCchH
Confidence 33345557999999999866
No 92
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=91.42 E-value=0.37 Score=46.09 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=28.5
Q ss_pred CCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccc
Q 009133 249 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTL 298 (542)
Q Consensus 249 ~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~ 298 (542)
.++.+.+|||+.-.-..--+....+- +-|++++|++|||+.---..
T Consensus 45 p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~GNhDk~~~~~ 90 (186)
T COG4186 45 PDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVPGNHDKCHPMY 90 (186)
T ss_pred ccceEEEecccccccchhhHHHHHHH----HcCCcEEEeeCCCCCCcccc
Confidence 34458999999753332222222222 34788999999999755333
No 93
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=91.24 E-value=0.49 Score=50.66 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=48.2
Q ss_pred CceEEEecCCCC-------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHh-hhcC--CCeE
Q 009133 221 SEVIVVGDILGQ-------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVLM--PHRV 284 (542)
Q Consensus 221 ~~i~VIGDIHG~-------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L-K~~~--P~~v 284 (542)
+++.-++|.|=- ++.|..+++ .+-.... ..+|.-||..|++.-|.+++..+... +... .--|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~-~a~~~~v-D~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLE-IAKEEKV-DFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHH-HHHHccC-CEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 357778888833 223333333 2222222 45999999999999998887776543 2222 1259
Q ss_pred EEecCCccccccc
Q 009133 285 YLLRGNHETKNCT 297 (542)
Q Consensus 285 ~lLRGNHE~~~~n 297 (542)
|+|.||||...-.
T Consensus 79 ~~I~GNHD~~~~~ 91 (390)
T COG0420 79 VVIAGNHDSPSRL 91 (390)
T ss_pred EEecCCCCchhcc
Confidence 9999999987643
No 94
>PLN02533 probable purple acid phosphatase
Probab=90.97 E-value=0.34 Score=53.07 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=38.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH--HHHH-HHHHhhhcCCCeEEEecCCccccc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLL-VLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--EvL~-lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
-++.|+||+|-. ......++ ..... .-+.+|+.||+++-+.+.- +... ++-.+....| ++...||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~-~i~~~-~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLE-HVSKW-DYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHH-HHHhc-CCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 478999999532 11122333 22112 2335899999997654321 1121 2222222334 789999999864
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=90.47 E-value=0.37 Score=49.76 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=40.8
Q ss_pred ceEEEecCCCCHHH--------------HHHHHHHhcCCCCCCceEEEeCCccccCCc-h-----HHHHHHHHHhhhcCC
Q 009133 222 EVIVVGDILGQFHD--------------LVALFEENAGFPSDHRYFVFNGNYVDKGSW-G-----LEVLLVLLAWKVLMP 281 (542)
Q Consensus 222 ~i~VIGDIHG~~~d--------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~-S-----lEvL~lL~~LK~~~P 281 (542)
+|+.+.|+||++.. |..+++ .......+..+|..||++...+. | ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~--- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLD-EARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV--- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHH-HHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC---
Confidence 47889999998653 556666 33222334568889999987654 2 134444444431
Q ss_pred CeEEEecCCcccc
Q 009133 282 HRVYLLRGNHETK 294 (542)
Q Consensus 282 ~~v~lLRGNHE~~ 294 (542)
.+ +..||||.-
T Consensus 78 -Da-~t~GNHefd 88 (288)
T cd07412 78 -DA-SAVGNHEFD 88 (288)
T ss_pred -ee-eeecccccc
Confidence 23 455999953
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=89.37 E-value=0.59 Score=47.16 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=39.5
Q ss_pred ceEEEecCCCC--H--HHHHHHHHHhcCCCCCCceEEEeCCcc-ccCCchH------HHHHHHHHhhhcCCCeEEEecCC
Q 009133 222 EVIVVGDILGQ--F--HDLVALFEENAGFPSDHRYFVFNGNYV-DKGSWGL------EVLLVLLAWKVLMPHRVYLLRGN 290 (542)
Q Consensus 222 ~i~VIGDIHG~--~--~dL~~il~~~~g~p~~~~~~VFLGDyV-DRG~~Sl------EvL~lL~~LK~~~P~~v~lLRGN 290 (542)
+++++||.=.. . ..+.+.+.+.+.... ...+|++||+| +-|..+. +.+..++.. +...--++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~-~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELG-PDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcC-CCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCC
Confidence 47899998653 1 344444442333222 34589999987 5554221 222222221 1123359999999
Q ss_pred cccc
Q 009133 291 HETK 294 (542)
Q Consensus 291 HE~~ 294 (542)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=88.63 E-value=0.86 Score=46.25 Aligned_cols=66 Identities=15% Similarity=0.210 Sum_probs=35.9
Q ss_pred eEEEecCCCCHHH----------------------HHHHHHHhcCCCCCCceEEEeCCccccCCchH-----HHHHHHHH
Q 009133 223 VIVVGDILGQFHD----------------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLA 275 (542)
Q Consensus 223 i~VIGDIHG~~~d----------------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~ 275 (542)
|+-+.|+||++.. +..++++.......+..++..||+++..+.+. .++..+-+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 6778899997533 33444411111133343467999998776542 23333333
Q ss_pred hhhcCCCeEEEecCCcccc
Q 009133 276 WKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 276 LK~~~P~~v~lLRGNHE~~ 294 (542)
.+-. .+. ||||..
T Consensus 83 ----~g~d-a~~-GNHefd 95 (264)
T cd07411 83 ----LGVD-AMV-GHWEFT 95 (264)
T ss_pred ----hCCe-EEe-cccccc
Confidence 2223 334 999953
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=88.28 E-value=0.64 Score=46.97 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=38.0
Q ss_pred ceEEEecCCCCH----------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH-----HHHHHHHHhhhcCCCeEEE
Q 009133 222 EVIVVGDILGQF----------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYL 286 (542)
Q Consensus 222 ~i~VIGDIHG~~----------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~v~l 286 (542)
+|+-+.|+||++ ..+..+++ ..... .+.-++..||+++..+.+. .++..+-.+ .-.+ +
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~-~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKK-EMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-V 74 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHH-HHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-E
Confidence 477889999985 34556666 22211 3456888999998765432 222222222 1133 4
Q ss_pred ecCCccc
Q 009133 287 LRGNHET 293 (542)
Q Consensus 287 LRGNHE~ 293 (542)
..||||.
T Consensus 75 ~~GNHef 81 (257)
T cd07408 75 TPGNHEF 81 (257)
T ss_pred ccccccc
Confidence 4699995
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.91 E-value=5.5 Score=37.99 Aligned_cols=62 Identities=26% Similarity=0.357 Sum_probs=46.7
Q ss_pred eEEEecCCC--CHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 223 VIVVGDILG--QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 223 i~VIGDIHG--~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
+.|+||+|= ...+|-.-|+ +.=.|.+-.+++++|+. -|.|++.+|-.+- +.++++||--+..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFk-klLvPgki~hilctGNl-----cs~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFK-KLLVPGKIQHILCTGNL-----CSKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEeccccCCccccccCHHHH-hccCCCceeEEEEeCCc-----chHHHHHHHHhhC----CCcEEEecccCcc
Confidence 678999994 4456666777 54467776789999996 5778899886653 4899999986543
No 100
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=86.83 E-value=4 Score=45.30 Aligned_cols=77 Identities=23% Similarity=0.353 Sum_probs=42.1
Q ss_pred CceEEEecCCC-CHHHH----HHHHHHhcCCC---CCCceEEEeCCcccc-CCch-----------HHHHHHHHHhhhcC
Q 009133 221 SEVIVVGDILG-QFHDL----VALFEENAGFP---SDHRYFVFNGNYVDK-GSWG-----------LEVLLVLLAWKVLM 280 (542)
Q Consensus 221 ~~i~VIGDIHG-~~~dL----~~il~~~~g~p---~~~~~~VFLGDyVDR-G~~S-----------lEvL~lL~~LK~~~ 280 (542)
-.+..++|+|= ...-+ ..+++...|.. +.-..++..||.||. |-++ .|-...+..+.-.-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 46889999995 33223 33333122221 223557778899994 3221 22223333333334
Q ss_pred CC--eEEEecCCccccccc
Q 009133 281 PH--RVYLLRGNHETKNCT 297 (542)
Q Consensus 281 P~--~v~lLRGNHE~~~~n 297 (542)
|. .|++.+|||+..-..
T Consensus 306 p~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred CCCceEEEecCCCCccccc
Confidence 43 588999999986543
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=83.46 E-value=2.5 Score=43.44 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=36.6
Q ss_pred ceEEEecCCCCH---------------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH-----HHHHHHHH
Q 009133 222 EVIVVGDILGQF---------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLA 275 (542)
Q Consensus 222 ~i~VIGDIHG~~---------------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~ 275 (542)
+|+-++|+||++ ..+..+++ .......+..++..||+++..+.+. .++..+-.
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVK-ELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHH-HHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 367889999875 33444555 2221223444666899998765432 22222222
Q ss_pred hhhcCCCeEEEecCCcccc
Q 009133 276 WKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 276 LK~~~P~~v~lLRGNHE~~ 294 (542)
+ -. .+. ..||||..
T Consensus 81 ~---g~-D~~-~lGNHefd 94 (281)
T cd07409 81 L---GY-DAM-TLGNHEFD 94 (281)
T ss_pred c---CC-CEE-Eecccccc
Confidence 2 22 233 34999954
No 102
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.53 E-value=3.4 Score=45.55 Aligned_cols=69 Identities=23% Similarity=0.386 Sum_probs=52.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHhcCCCC-CCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCc
Q 009133 221 SEVIVVGDILGQFHDLVALFEENAGFPS-DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~-~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNH 291 (542)
.+|.||||.-|.++.|.+-.+ .....+ .=.-++++|++.+--..+-|++.+....+ ..|--+|++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~-~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQ-KVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHH-HHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 689999999999999988777 332222 22358999999998778888888876654 6677788887765
No 103
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=81.12 E-value=1.9 Score=49.07 Aligned_cols=42 Identities=19% Similarity=0.261 Sum_probs=35.9
Q ss_pred eEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccc
Q 009133 252 YFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTL 298 (542)
Q Consensus 252 ~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~ 298 (542)
++-.+||+.||||..-.++..|+... +|=+-.|||+--+|..
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMGA 228 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHHH
Confidence 48899999999999999999998552 7888999999877643
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=80.14 E-value=3.8 Score=44.08 Aligned_cols=74 Identities=16% Similarity=0.289 Sum_probs=46.2
Q ss_pred CceEEEecCCCCHHHHHHHHH--HhcCCCCCCceEEEeCCccc-cCCc------------hHHHHHHHHHhhhcCCCeEE
Q 009133 221 SEVIVVGDILGQFHDLVALFE--ENAGFPSDHRYFVFNGNYVD-KGSW------------GLEVLLVLLAWKVLMPHRVY 285 (542)
Q Consensus 221 ~~i~VIGDIHG~~~dL~~il~--~~~g~p~~~~~~VFLGDyVD-RG~~------------SlEvL~lL~~LK~~~P~~v~ 285 (542)
++|.|=|=-||+++.+-+-+. ++.|-.+- +.+++.|||=- |-.. -+..+.--+.-....|=--+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkV-DLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKV-DLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCc-cEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 467888999999998874433 14443333 45899999842 1111 12223333444456676677
Q ss_pred EecCCccccc
Q 009133 286 LLRGNHETKN 295 (542)
Q Consensus 286 lLRGNHE~~~ 295 (542)
++-||||.+.
T Consensus 80 FIGGNHEAsn 89 (456)
T KOG2863|consen 80 FIGGNHEASN 89 (456)
T ss_pred EecCchHHHH
Confidence 8999999875
No 105
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=79.23 E-value=4 Score=42.12 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=46.2
Q ss_pred CceEEEecCCCC--HHHHHHHHHHhcCCCCCCceEEEeCCccccC-CchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 221 SEVIVVGDILGQ--FHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 221 ~~i~VIGDIHG~--~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
++|.++|||=|. ...|...+. ........+..|.+||...-| .-+-+++..|..+-. .++.+ |||+...
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~-~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLP-QLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHH-HHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhccC
Confidence 478999999999 455666665 332222334577799999766 346777777775532 45555 9999754
No 106
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=79.09 E-value=4.7 Score=41.30 Aligned_cols=48 Identities=21% Similarity=0.328 Sum_probs=30.1
Q ss_pred CceEEEeCCccccCCchH--H-----HHH-HHHHhhhcCCC-eEEEecCCccccccc
Q 009133 250 HRYFVFNGNYVDKGSWGL--E-----VLL-VLLAWKVLMPH-RVYLLRGNHETKNCT 297 (542)
Q Consensus 250 ~~~~VFLGDyVDRG~~Sl--E-----vL~-lL~~LK~~~P~-~v~lLRGNHE~~~~n 297 (542)
-..+|+.||+|+.+.+.. + .+. +.-.++..+|. .|+...||||....+
T Consensus 69 ~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 69 PDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred CCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 345899999998876631 1 112 22233434443 599999999987543
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=77.94 E-value=3.2 Score=51.11 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=38.8
Q ss_pred CceEEEecCCCCH---HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH-----HHHHHHHHhhhcCCCeEEEecCCcc
Q 009133 221 SEVIVVGDILGQF---HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLLRGNHE 292 (542)
Q Consensus 221 ~~i~VIGDIHG~~---~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~v~lLRGNHE 292 (542)
-+|+.+.|+||++ ..+..+++ .......+..++..||+++..+.+. .++..|-++ +--+...||||
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHE 734 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIK-EVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHE 734 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHH-HHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEecccc
Confidence 3688899999985 34444454 2211122333344899999876542 333333333 22355889999
Q ss_pred c
Q 009133 293 T 293 (542)
Q Consensus 293 ~ 293 (542)
.
T Consensus 735 f 735 (1163)
T PRK09419 735 F 735 (1163)
T ss_pred c
Confidence 6
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=76.69 E-value=3.2 Score=43.00 Aligned_cols=68 Identities=18% Similarity=0.144 Sum_probs=37.2
Q ss_pred ceEEEecCCCCHHH-------------HHHH---HHHhcCCCCCCceEEEeCCccccCCchHH-------HHHHHHHhhh
Q 009133 222 EVIVVGDILGQFHD-------------LVAL---FEENAGFPSDHRYFVFNGNYVDKGSWGLE-------VLLVLLAWKV 278 (542)
Q Consensus 222 ~i~VIGDIHG~~~d-------------L~~i---l~~~~g~p~~~~~~VFLGDyVDRG~~SlE-------vL~lL~~LK~ 278 (542)
.|+-+.|+||++.. +.++ +++.......+..++..||+++.-+.+-- ++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 47788999998641 2222 32122222233446779999876444311 233333332
Q ss_pred cCCCeEEEecCCcccc
Q 009133 279 LMPHRVYLLRGNHETK 294 (542)
Q Consensus 279 ~~P~~v~lLRGNHE~~ 294 (542)
-=.+..||||..
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 345778999974
No 109
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=75.55 E-value=5.9 Score=38.98 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=28.2
Q ss_pred CCCceEEEeCCcc--ccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 248 SDHRYFVFNGNYV--DKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 248 ~~~~~~VFLGDyV--DRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
+..+.++.-||+- =|=+...+-+.+|- .-|+.=+++||||+.-.
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~----~LPG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIG----DLPGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhh----cCCCcEEEEecCCcccc
Confidence 3445578889973 22333344444443 45889999999999755
No 110
>PRK09983 pflD putative formate acetyltransferase 2; Provisional
Probab=73.00 E-value=4.4 Score=47.79 Aligned_cols=116 Identities=11% Similarity=0.036 Sum_probs=71.3
Q ss_pred cchhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhccc
Q 009133 55 VTEADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGS 132 (542)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~~~ 132 (542)
+++++.-++..-+++.|..-+++--+++..+.=++-|..+|+++++ ++..|++|. +.+.|-+|+|..-=-.-.-.-+
T Consensus 183 ~~~~~fy~a~~i~~~av~~~a~Rya~lA~~~a~~e~d~~rk~EL~~-iA~~c~~vp~~pa~tF~EAlQ~~wf~~l~~~~e 261 (765)
T PRK09983 183 QPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLT-IAEISRHNAQHKPQTFWQACQLFWYMNIILQYE 261 (765)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH-HHHHhccCcccCCCCHHHHHHHHHHHHHHHHHh
Confidence 4456777777778888888888888888777766777776766665 567899998 5889999998742211000001
Q ss_pred hhhhhccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133 133 TMRERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (542)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~ 175 (542)
+....+.-|.++..-.|+=..-+ ++| +|.+++++|++.|
T Consensus 262 ~ng~~~s~GR~Dq~L~Pyy~~Dl---~~G-~t~e~A~Ell~~~ 300 (765)
T PRK09983 262 SNASSLSLGRFDQYMLPFYQASL---TQG-EDPAFLKELLESL 300 (765)
T ss_pred cCccccCCCcHHHHHHHHHHHHH---HcC-CCHHHHHHHHHHH
Confidence 11122222333332222100011 355 7999999999865
No 111
>cd01677 PFL2_DhaB_BssA Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.
Probab=72.41 E-value=4.4 Score=47.85 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=69.0
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhccchh
Q 009133 57 EADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTM 134 (542)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~~~~~ 134 (542)
+.+.-++..-+++.|+.-+++--+++.++.=+.-|..+|++++ .++..|++|. +.+.|.+|+|...=-.-...-++.
T Consensus 192 k~~fy~A~~i~~~av~~~a~Rya~la~e~A~~e~d~~rk~EL~-~iA~~c~~vp~~pp~tf~EAlQ~~~~~~l~~~~e~n 270 (781)
T cd01677 192 KIYFYQAMIIVCEAVITYAKRYAELAKELAAKETDPKRKAELL-EIAEICRRVPAHPPRTFWEALQSFWFIHLILQIESN 270 (781)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHH-HHHHHhccCcCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3445566666778888888888888887776665555555555 5578899998 588999999885321100000111
Q ss_pred hhhccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133 135 RERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (542)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~ 175 (542)
...+.-|.++.+-.++=..-+ ++|.+|.+++.+|++.|
T Consensus 271 ~~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~eeA~Ell~~f 308 (781)
T cd01677 271 GHSISPGRFDQYLYPFYKQDI---EEGRLTREGAIELLECL 308 (781)
T ss_pred CcccCCCcHHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence 111222222222221111112 46789999999999975
No 112
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=72.03 E-value=7.2 Score=39.47 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCch-----HHHHHHHHHhhhcCCCeEEEecCCccc
Q 009133 231 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 231 G~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~~v~lLRGNHE~ 293 (542)
|-+.-+..+++ .......+.-+|..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRK-QLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHH-HHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45677777777 332223344688899999877543 34444444442 23556799995
No 113
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=65.59 E-value=16 Score=35.39 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=36.1
Q ss_pred eEEEecCCCC-----HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH------------H-HHHHHHHhh--hcCCC
Q 009133 223 VIVVGDILGQ-----FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL------------E-VLLVLLAWK--VLMPH 282 (542)
Q Consensus 223 i~VIGDIHG~-----~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl------------E-vL~lL~~LK--~~~P~ 282 (542)
|++++|+|=. ++.|.++|. .......-..+|++|+++|.-.... + -+..+.... +..--
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~-~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLS-GVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHH-CCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHH-hccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhccccc
Confidence 4567777654 566667776 4331122345999999999622211 1 111122111 11125
Q ss_pred eEEEecCCcccccc
Q 009133 283 RVYLLRGNHETKNC 296 (542)
Q Consensus 283 ~v~lLRGNHE~~~~ 296 (542)
+|+++.|+||--..
T Consensus 80 ~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS 93 (209)
T ss_dssp EEEEE--TTCTT-S
T ss_pred EEEEeCCCcccccc
Confidence 79999999997654
No 114
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=63.45 E-value=17 Score=37.31 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=42.6
Q ss_pred ceEEEecCCCCHH--HHHHHHHHhcCCCCCCceEEEeCCccccC-CchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 222 EVIVVGDILGQFH--DLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 222 ~i~VIGDIHG~~~--dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
+|..+|||=|..- .+...+. ........+.+|-+||..--| .-+-++...|..+.. .+..+ ||||...
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~-~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLP-KLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHH-HHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccCc
Confidence 4789999999763 3444454 222122233467799998766 356777777766643 34444 9998654
No 115
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=63.36 E-value=11 Score=43.75 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=40.2
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEeCCccccCCchH-------------HHHHH
Q 009133 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------EvL~l 272 (542)
+|+-..|+||++.. +..+++ .......+..+|-.||++...+.+- -++..
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~a 105 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIK-AARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKA 105 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHH-HHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHH
Confidence 58889999999743 333444 2221223456888999998665532 13444
Q ss_pred HHHhhhcCCCeEEEecCCccc
Q 009133 273 LLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 273 L~~LK~~~P~~v~lLRGNHE~ 293 (542)
+-.+. .=....||||.
T Consensus 106 mN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 106 MNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHhcC-----CcEEeccchhh
Confidence 44443 34577899994
No 116
>TIGR01774 PFL2-3 pyruvate formate-lyase. This model represents isoforms of the pyruvate-formate lyases found in a limited number of species including E. coli. This enzyme catalyzes the reaction pyruvate + CoA - acetyl-CoA + formate, which is a step in the fermentation of glucose.
Probab=62.62 E-value=9.6 Score=45.15 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=67.3
Q ss_pred hhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhccchhh
Q 009133 58 ADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTMR 135 (542)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~~~~~~ 135 (542)
.+.-++..-+++.|..-+.|--+++..+.=+.-|..+|+++++| +..|++|. +.+.|.+|+|..-=-.-.-.-++..
T Consensus 195 ~~fy~a~~i~~~a~~~~a~R~a~lA~~~a~~e~d~~Rk~EL~~i-A~~c~~vp~~pa~tf~EAlQ~~wf~~l~~~~E~ng 273 (786)
T TIGR01774 195 YSFYQAAKIVLEAVINHILRYAKLAEEMAASETGESRREELLKI-AEICRKVAAEKPQTFWQAVQLVWLVQSILQQESNE 273 (786)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH-HHHhccCcccCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 34445555566777777777777777776677777777777766 56899998 5889999998742210000001111
Q ss_pred hhccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133 136 ERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (542)
Q Consensus 136 ~~~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~ 175 (542)
..+.-|.++..-.++=..-+ ++|.+|.+++++|++.|
T Consensus 274 ~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~e~A~ELl~~~ 310 (786)
T TIGR01774 274 QSISMGRIDQYLYPFYKKDI---GEGRIDRELAFEILASL 310 (786)
T ss_pred cccCCCchHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence 22222333222221100011 56789999999999966
No 117
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=61.35 E-value=11 Score=42.22 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=40.8
Q ss_pred ceEEEecCCCCHH------------HHHH---HHHHhcCCCCCCceEEEeCCccccCCch------HHHHHHHHHhhhcC
Q 009133 222 EVIVVGDILGQFH------------DLVA---LFEENAGFPSDHRYFVFNGNYVDKGSWG------LEVLLVLLAWKVLM 280 (542)
Q Consensus 222 ~i~VIGDIHG~~~------------dL~~---il~~~~g~p~~~~~~VFLGDyVDRG~~S------lEvL~lL~~LK~~~ 280 (542)
+|+-..|+||++. -+.+ +++ ...-...+..+|=.||+++..+-+ .-++..|-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~-~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~--- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVK-QLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG--- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHH-HHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC---
Confidence 4788899999998 3333 333 111111244567799999984333 33455555554
Q ss_pred CCeEEEecCCccccc
Q 009133 281 PHRVYLLRGNHETKN 295 (542)
Q Consensus 281 P~~v~lLRGNHE~~~ 295 (542)
-=.+..||||.-.
T Consensus 104 --yDa~tiGNHEFd~ 116 (517)
T COG0737 104 --YDAMTLGNHEFDY 116 (517)
T ss_pred --CcEEeeccccccc
Confidence 2346779999654
No 118
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=60.89 E-value=22 Score=36.70 Aligned_cols=40 Identities=13% Similarity=0.202 Sum_probs=23.5
Q ss_pred ceEEEecCCCCHHH----------HHHHHHH---hcCCCCCCceEEEeCCccc
Q 009133 222 EVIVVGDILGQFHD----------LVALFEE---NAGFPSDHRYFVFNGNYVD 261 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------L~~il~~---~~g~p~~~~~~VFLGDyVD 261 (542)
.|+-+.|+||++.. +..++++ .......+..++-.||++.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~ 54 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINT 54 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCC
Confidence 37788999998633 3444441 1111123445777999984
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=60.01 E-value=14 Score=38.74 Aligned_cols=65 Identities=20% Similarity=0.160 Sum_probs=37.7
Q ss_pred eEEEecCCCCHH------HHHHHHHHhcCCC----CCCceEEEeCCccccCCch-------------HHHHHHHHHhhhc
Q 009133 223 VIVVGDILGQFH------DLVALFEENAGFP----SDHRYFVFNGNYVDKGSWG-------------LEVLLVLLAWKVL 279 (542)
Q Consensus 223 i~VIGDIHG~~~------dL~~il~~~~g~p----~~~~~~VFLGDyVDRG~~S-------------lEvL~lL~~LK~~ 279 (542)
|+-+-|+||++. .+..+++ ..... ..+..++..||.+.-++.+ .-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~-~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVN-ALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHH-HHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 566789999963 3433444 21111 2344678899998765442 23344444443
Q ss_pred CCCeEEEecCCccc
Q 009133 280 MPHRVYLLRGNHET 293 (542)
Q Consensus 280 ~P~~v~lLRGNHE~ 293 (542)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 23567899994
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=59.09 E-value=14 Score=42.72 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=38.8
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEeCCccccCCchH-------------HHHHH
Q 009133 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------EvL~l 272 (542)
+|+-..|+||++.. +..+++ .......+..+|-.||.+..-+.+- -++..
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIK-QARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHH-HHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 47888999999753 334444 2211123456788999998655442 13333
Q ss_pred HHHhhhcCCCeEEEecCCccc
Q 009133 273 LLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 273 L~~LK~~~P~~v~lLRGNHE~ 293 (542)
+-.+. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 33332 23567899994
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=58.21 E-value=8.2 Score=42.77 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=33.9
Q ss_pred eEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccc
Q 009133 252 YFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCT 297 (542)
Q Consensus 252 ~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n 297 (542)
++=.+||+-||||+.-.++..|...- .+=+-.|||+--+|.
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWmg 233 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWMG 233 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEee
Confidence 47789999999999999999887552 677889999986653
No 122
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=56.51 E-value=2.4e+02 Score=29.03 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=21.8
Q ss_pred CCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133 466 SGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL 506 (542)
Q Consensus 466 ~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f 506 (542)
+++-+.+.|.|.|. ..|.++.++=.. .+.+.++|
T Consensus 224 ~~~~v~lv~vP~Fs------~t~~~vlvdl~t-Le~~~v~f 257 (257)
T cd07387 224 EGQRVLLVCVPSFS------KTGTAVLVNLRT-LECEPISF 257 (257)
T ss_pred CCCeEEEEEeCCcC------cCCEEEEEECCc-CcEEEEeC
Confidence 46778889999985 356677776443 34444443
No 123
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=52.98 E-value=17 Score=44.83 Aligned_cols=42 Identities=21% Similarity=0.416 Sum_probs=25.6
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEeCCccccCC
Q 009133 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (542)
+|+-+.|+||++.. +..+++ .......+..+|-.||++...+
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~-~~r~~~~n~llld~GD~~qGs~ 100 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIK-KARKENPNTLLVDNGDLIQGNP 100 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHH-HHHHhCCCeEEEeCCCccCCCh
Confidence 48889999998633 334444 2211122344555999998665
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=52.07 E-value=42 Score=35.30 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=47.5
Q ss_pred CCCceEEEecCC----CCHHHHHHHHHHhc-C-CCC--CCceEEEeCCccccC----Cch----HHHHHHHHHh-hhcCC
Q 009133 219 EDSEVIVVGDIL----GQFHDLVALFEENA-G-FPS--DHRYFVFNGNYVDKG----SWG----LEVLLVLLAW-KVLMP 281 (542)
Q Consensus 219 ~~~~i~VIGDIH----G~~~dL~~il~~~~-g-~p~--~~~~~VFLGDyVDRG----~~S----lEvL~lL~~L-K~~~P 281 (542)
....++|+||+| -.++.|.++|+ .. . .+. ....+||.|+|+-+. ..+ .|-+.-|..+ ...||
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~-~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLS-LYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHH-HhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 346799999999 45677788887 33 1 121 134589999998762 222 2334444432 33455
Q ss_pred -----CeEEEecCCccc
Q 009133 282 -----HRVYLLRGNHET 293 (542)
Q Consensus 282 -----~~v~lLRGNHE~ 293 (542)
.++++++|-.|-
T Consensus 105 ~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 105 LILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHhcCeEEEECCCCCC
Confidence 689999999885
No 125
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=51.95 E-value=55 Score=37.80 Aligned_cols=61 Identities=21% Similarity=0.365 Sum_probs=41.7
Q ss_pred ChhhHHHHHhHcCCe----EEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEE---ecCCCCCCCCCCCCceEEE
Q 009133 419 GPDCTEEFLKENHLK----LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTL---FTAPNYPQVDGFDNVGAYA 491 (542)
Q Consensus 419 G~d~~~~FL~~n~l~----lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTV---FSApnY~~~~~~~N~gA~l 491 (542)
-++..++.|+..|++ .||-||.++- +.+|-..- -++||++.| ||.+ |- ....-|+|-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VIDGGfskA-Yq---k~TGIAGYT 570 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVIDGGFSKA-YQ---KTTGIAGYT 570 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEcChhhhh-hc---cccCccceE
Confidence 456788899999997 9999999752 56777654 368999998 5553 21 223335555
Q ss_pred EEeC
Q 009133 492 VLKP 495 (542)
Q Consensus 492 ~l~~ 495 (542)
.|..
T Consensus 571 LiyN 574 (640)
T PF06874_consen 571 LIYN 574 (640)
T ss_pred EEec
Confidence 5544
No 126
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=51.60 E-value=22 Score=38.23 Aligned_cols=45 Identities=18% Similarity=0.153 Sum_probs=29.2
Q ss_pred CceEEEeCCccccCCc---hHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133 250 HRYFVFNGNYVDKGSW---GLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 250 ~~~~VFLGDyVDRG~~---SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
.+.+||.||.|+- .. ...+++..++-.+.+.=-+..+.|||+...
T Consensus 101 PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 101 PDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 3459999999985 32 233444444444444444778999999865
No 127
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=51.38 E-value=22 Score=42.34 Aligned_cols=66 Identities=21% Similarity=0.192 Sum_probs=38.8
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEeCCccccCCchH--------------HHHH
Q 009133 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--------------EVLL 271 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--------------EvL~ 271 (542)
+|+-..|+||++.. +..+++ ...-...+..+|..||++..-+.+- -++.
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~-~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIE-EAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHH-HHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 47889999999643 223344 2211223456888999997654431 1344
Q ss_pred HHHHhhhcCCCeEEEecCCccc
Q 009133 272 VLLAWKVLMPHRVYLLRGNHET 293 (542)
Q Consensus 272 lL~~LK~~~P~~v~lLRGNHE~ 293 (542)
.+-.|. .=....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 444443 23577899994
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=51.09 E-value=23 Score=40.21 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=23.9
Q ss_pred CceEEEeCCccccCCch-----HHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133 250 HRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (542)
Q Consensus 250 ~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~~v~lLRGNHE~~ 294 (542)
+..+|..||++...+.+ ...+.++-++. --....||||.-
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 45578899998755443 22233333332 346778999953
No 129
>PF02901 PFL: Pyruvate formate lyase; InterPro: IPR004184 Pyruvate formate-lyase 2.3.1.54 from EC (also known as formate C-acetyltransferase) is an enzyme which converts acetyl-CoA and formate to CoA and pyruvate. Acetyl-CoA + formate = CoA + pyruvate In Escherichia coli, it uses a radical mechanism to reversibly cleave the C1-C2 bond of pyruvate using the Gly 734 radical and two cysteine residues (Cys 418, Cys 419) [].; GO: 0008861 formate C-acetyltransferase activity, 0006006 glucose metabolic process, 0005737 cytoplasm; PDB: 1QHM_A 1MZO_B 3PFL_B 1H18_A 2PFL_A 1CM5_B 1H16_A 1H17_A 1R9E_A 1R8W_A ....
Probab=49.44 E-value=12 Score=43.43 Aligned_cols=114 Identities=21% Similarity=0.253 Sum_probs=65.5
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhc-cch
Q 009133 57 EADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEV-GST 133 (542)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~-~~~ 133 (542)
+.+.-++..-++++|..-+++-.+++..++=+.=|..+|.++++ ++..|.+|. ..+.|.+|+|...=- ++-. -+.
T Consensus 195 k~~fy~a~~i~~~av~~~a~Rya~la~~~A~~e~d~~rk~EL~~-iA~~c~~vp~~pa~tF~EAlQ~~wf~-~l~~~~e~ 272 (648)
T PF02901_consen 195 KRDFYEAMIIVLEAVIAYAKRYADLAEELAEEETDPERKAELLE-IAEICRRVPENPARTFREALQSVWFI-HLALHIES 272 (648)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SSHHHHHHHHH-HHHHHHHCTTS---SHHHHHHHHHHH-HHHHHHHS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCHHHHHHHHH-HHHHhCcCcCCCCCCHHHHHHHHHHH-HHHHHHhc
Confidence 44555666777888889999999999988888888666666555 577899999 589999999884211 0000 000
Q ss_pred hhhhccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133 134 MRERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF 175 (542)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~ 175 (542)
....+.-|.++..--|+=..-+ ..|.+|.+...+|++.|
T Consensus 273 ~~~~~s~GR~DqyL~Pyyk~Dl---~~G~lt~eeA~Ell~~~ 311 (648)
T PF02901_consen 273 NGHSISLGRFDQYLYPYYKKDL---EAGRLTEEEAQELLECL 311 (648)
T ss_dssp -CSCEE-BSHHHHHHHHHHHHH---HTTSS-HHHHHHHHHHH
T ss_pred CCcccCCCchHHHHHHHHHhhH---hhhcCCHHHHHHHHHHH
Confidence 0011111222211111100001 46778999999999865
No 130
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=46.80 E-value=26 Score=39.64 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=24.1
Q ss_pred ceEEEecCCCCHHH----------HHHHHHH---hcCCCCCCceEEEeCCcccc
Q 009133 222 EVIVVGDILGQFHD----------LVALFEE---NAGFPSDHRYFVFNGNYVDK 262 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------L~~il~~---~~g~p~~~~~~VFLGDyVDR 262 (542)
.|+-+.|+||++.. +..++++ .......+.-+|..||++.-
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~G 89 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTG 89 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccc
Confidence 47889999999741 2233331 10111234557889999864
No 131
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=42.53 E-value=37 Score=37.72 Aligned_cols=20 Identities=10% Similarity=0.205 Sum_probs=18.6
Q ss_pred hHHHHHhHcCCeEEEEeccC
Q 009133 422 CTEEFLKENHLKLIIRSHEG 441 (542)
Q Consensus 422 ~~~~FL~~n~l~lIIRgHe~ 441 (542)
.++..+-++++++++=||.-
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH 342 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVH 342 (452)
T ss_pred HHHHHHHHhceeEEEeccce
Confidence 68999999999999999993
No 132
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=40.16 E-value=24 Score=36.88 Aligned_cols=67 Identities=21% Similarity=0.376 Sum_probs=42.5
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCC-eEEEecCCccccc
Q 009133 219 EDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPH-RVYLLRGNHETKN 295 (542)
Q Consensus 219 ~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~-~v~lLRGNHE~~~ 295 (542)
...+.+.|+|.|+...+.. ..|+.+ .++-+||+-.-|. +-||+-+=- .--..|. +=+.++||||...
T Consensus 60 ~~~r~VcisdtH~~~~~i~-------~~p~gD-vlihagdfT~~g~-~~ev~~fn~-~~gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFDIN-------DIPDGD-VLIHAGDFTNLGL-PEEVIKFNE-WLGSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred CceEEEEecCcccccCccc-------cCCCCc-eEEeccCCccccC-HHHHHhhhH-HhccCcceeeEEEeeccceee
Confidence 4468999999998765542 344444 4899999977664 345554422 1123332 3457899999765
No 133
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=36.99 E-value=91 Score=31.00 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=63.1
Q ss_pred ceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChh----------------HHHHHHhCccc
Q 009133 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW----------------AELCTKFGKKD 314 (542)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~----------------~E~~~ky~~~~ 314 (542)
..+||+| -|-+.-|.+.+|-+++-.|-.+.++ -|+-|.+..++...|. .|+...|-.
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~lt-- 112 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLT-- 112 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhh--
Confidence 4589997 5888999999999999888877766 7898888766544443 233444433
Q ss_pred hhhhhhhhhhhhcCCCceEEeeceEEEecc-CC
Q 009133 315 CKLVFDKCLECFRTLPLATIIAQGVYTTHG-GL 346 (542)
Q Consensus 315 ~~~l~~~~~~~f~~LPlaaiI~~~il~vHG-GI 346 (542)
.+|..+..+..++++...+-.+++.+-| |-
T Consensus 113 --Sv~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 113 --SVFTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred --hHHHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 3677777777778887777777777777 53
No 134
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=36.98 E-value=55 Score=35.86 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=40.8
Q ss_pred CceEEEecCCC-CHHHH--HHHHHHhcCCCCCCceEEEeCCccccCCchHH------HHHHHHHhhh-cCCCeEEEecCC
Q 009133 221 SEVIVVGDILG-QFHDL--VALFEENAGFPSDHRYFVFNGNYVDKGSWGLE------VLLVLLAWKV-LMPHRVYLLRGN 290 (542)
Q Consensus 221 ~~i~VIGDIHG-~~~dL--~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE------vL~lL~~LK~-~~P~~v~lLRGN 290 (542)
-+++++||-=+ .+... .+.+. ..+....-+.+|-+||-++-|..|+. .+.-++.-.. ...-.+|++.||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~-~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLK-QYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHH-HHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 37999999533 32221 12233 22112233458899998888877643 3444442211 011259999999
Q ss_pred cccc
Q 009133 291 HETK 294 (542)
Q Consensus 291 HE~~ 294 (542)
||.+
T Consensus 106 HDy~ 109 (394)
T PTZ00422 106 ADWD 109 (394)
T ss_pred cccc
Confidence 9973
No 135
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=36.64 E-value=54 Score=39.05 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=25.5
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHHhcCCCCCCceEEEeCCccccCC
Q 009133 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (542)
Q Consensus 222 ~i~VIGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (542)
+|+-..|+||++.. +..+++ ...-...+..+|..||++---+
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~-~~R~e~~ntlllD~GD~iqGsp 98 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVN-KAREEAKNSVLFDDGDALQGTP 98 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHH-HHHHhCCCeEEEECCCCCCCch
Confidence 58889999999632 333444 2211123456888999885433
No 136
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=34.74 E-value=42 Score=35.22 Aligned_cols=85 Identities=20% Similarity=0.270 Sum_probs=49.2
Q ss_pred HhcCCeeeeecC-CCCceEEEecC--CCCHHHHHHHHHH-hcCCCCCCceEEEeCCcc-ccCCch---------HHHHHH
Q 009133 207 REERNCVKLRVR-EDSEVIVVGDI--LGQFHDLVALFEE-NAGFPSDHRYFVFNGNYV-DKGSWG---------LEVLLV 272 (542)
Q Consensus 207 ~~ep~lv~l~~~-~~~~i~VIGDI--HG~~~dL~~il~~-~~g~p~~~~~~VFLGDyV-DRG~~S---------lEvL~l 272 (542)
...|.+.+-..+ .+-+++||||- +|.|..-.-.++. ..|..-.-+.+|-+||=+ |-|..+ .|-+..
T Consensus 29 ~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT 108 (336)
T KOG2679|consen 29 AELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYT 108 (336)
T ss_pred hhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhccc
Confidence 334445443322 23479999995 8888766655541 222222234578899944 667654 344443
Q ss_pred HHHhhhcCCCeEEEecCCccccc
Q 009133 273 LLAWKVLMPHRVYLLRGNHETKN 295 (542)
Q Consensus 273 L~~LK~~~P~~v~lLRGNHE~~~ 295 (542)
--.|+ .-++.+.|||+.+-
T Consensus 109 ~pSLQ----kpWy~vlGNHDyrG 127 (336)
T KOG2679|consen 109 APSLQ----KPWYSVLGNHDYRG 127 (336)
T ss_pred Ccccc----cchhhhccCccccC
Confidence 33333 24889999999753
No 137
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=25.33 E-value=2e+02 Score=23.88 Aligned_cols=70 Identities=19% Similarity=0.103 Sum_probs=46.7
Q ss_pred ceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCc
Q 009133 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (542)
Q Consensus 222 ~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNH 291 (542)
.+.|+=|---+.+.+..+++..-...+..+.++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 4778888777888888888732223235566899999999888888866666665555666766665554
No 138
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=21.08 E-value=3.1e+02 Score=30.99 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=29.1
Q ss_pred hhhHHHHHhHcCCe----EEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEE
Q 009133 420 PDCTEEFLKENHLK----LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTL 472 (542)
Q Consensus 420 ~d~~~~FL~~n~l~----lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTV 472 (542)
.++..+.|+..||+ .||-||+++. ..+|-..- -++||+|-|
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVk----------e~~GE~PI--KAngKliVI 559 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVK----------EKNGENPI--KANGKLIVI 559 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCccc----------ccCCCCCc--cCCCeEEEE
Confidence 34677889999995 8999999742 23444332 467898877
Done!