Query         009133
Match_columns 542
No_of_seqs    351 out of 2241
Neff          5.6 
Searched_HMMs 29240
Date          Mon Mar 25 19:34:21 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009133hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3h63_A Serine/threonine-protei 100.0 1.6E-77 5.6E-82  616.9  29.1  309  150-514     1-310 (315)
  2 3icf_A PPT, serine/threonine-p 100.0 3.6E-76 1.2E-80  611.2  28.8  316  149-521     3-334 (335)
  3 3ll8_A Serine/threonine-protei 100.0 1.6E-71 5.4E-76  579.5  29.5  305  157-522    22-339 (357)
  4 3e7a_A PP-1A, serine/threonine 100.0 1.3E-70 4.6E-75  561.9  26.8  270  188-508    27-297 (299)
  5 1wao_1 Serine/threonine protei 100.0 9.3E-68 3.2E-72  568.3  31.1  350  106-520   117-472 (477)
  6 2ie4_C PP2A-alpha;, serine/thr 100.0 2.6E-67 8.9E-72  540.5  29.9  293  162-513     4-297 (309)
  7 1aui_A Calcineurin, serine/thr 100.0 2.2E-67 7.6E-72  568.0  30.7  288  169-514    44-343 (521)
  8 1fjm_A Protein serine/threonin 100.0 1.1E-64 3.6E-69  525.1  29.4  273  188-511    28-302 (330)
  9 2z72_A Protein-tyrosine-phosph 100.0 3.3E-42 1.1E-46  357.8  -2.7  281  149-496     7-321 (342)
 10 2dfj_A Diadenosinetetraphospha 100.0 6.6E-32 2.3E-36  273.6   3.5  189  221-439     1-199 (280)
 11 2qjc_A Diadenosine tetraphosph  99.9 9.1E-24 3.1E-28  211.3   6.7  135  205-350     7-148 (262)
 12 1g5b_A Serine/threonine protei  99.8 2.8E-21 9.7E-26  186.9  11.6  131  211-348     3-144 (221)
 13 3rqz_A Metallophosphoesterase;  99.6 1.9E-14 6.5E-19  141.3  13.5  114  220-347     3-121 (246)
 14 1nnw_A Hypothetical protein; s  99.5 3.3E-13 1.1E-17  131.6  18.2  122  221-346     2-141 (252)
 15 3qfm_A SAPH, putative uncharac  99.3 1.6E-12 5.4E-17  130.3   7.1  118  221-345    12-138 (270)
 16 1su1_A Hypothetical protein YF  98.8 5.3E-09 1.8E-13  100.6   7.3   69  221-295    26-102 (208)
 17 2a22_A Vacuolar protein sortin  98.5 8.3E-07 2.8E-11   85.4  11.6   93  221-346    26-123 (215)
 18 1xm7_A Hypothetical protein AQ  98.5 6.1E-07 2.1E-11   84.6  10.3   71  221-295     2-85  (195)
 19 3ck2_A Conserved uncharacteriz  98.4   2E-07 6.7E-12   86.7   6.0   59  221-295     7-65  (176)
 20 2kkn_A Uncharacterized protein  98.4 1.5E-07   5E-12   88.6   5.0   62  221-294    23-86  (178)
 21 1uf3_A Hypothetical protein TT  98.4 3.8E-07 1.3E-11   86.0   6.7   72  221-295     6-77  (228)
 22 1z2w_A Vacuolar protein sortin  98.4 1.2E-06 4.1E-11   82.6   9.6   65  221-295    11-77  (192)
 23 3ib7_A ICC protein; metallopho  98.2 0.00012 4.1E-09   72.9  21.7   74  219-293    24-112 (330)
 24 1s3l_A Hypothetical protein MJ  98.2 9.1E-07 3.1E-11   83.9   5.7   64  221-295    26-89  (190)
 25 2yvt_A Hypothetical protein AQ  98.2   8E-07 2.7E-11   86.1   4.5   72  221-295     6-103 (260)
 26 3d03_A Phosphohydrolase; glyce  97.7 5.9E-05   2E-09   73.0   8.0   71  221-294     1-84  (274)
 27 2q8u_A Exonuclease, putative;   97.4 0.00011 3.6E-09   74.9   5.5   72  220-295    18-110 (336)
 28 2nxf_A Putative dimetal phosph  97.4 9.2E-05 3.1E-09   72.8   4.1   72  221-294     6-100 (322)
 29 3rl5_A Metallophosphoesterase   97.3 0.00014 4.7E-09   74.2   4.8   66  220-295    59-124 (296)
 30 3av0_A DNA double-strand break  97.3  0.0003   1E-08   73.4   7.3   73  220-295    20-109 (386)
 31 1ii7_A MRE11 nuclease; RAD50,   97.2 0.00032 1.1E-08   71.4   5.7   71  221-294     1-88  (333)
 32 2xmo_A LMO2642 protein; phosph  96.8  0.0012 4.2E-08   69.2   6.5   73  220-295    39-139 (443)
 33 3tho_B Exonuclease, putative;   96.3  0.0015 5.2E-08   68.0   3.1   69  221-293     1-90  (379)
 34 4fbk_A DNA repair and telomere  96.1  0.0053 1.8E-07   66.3   5.7   54  220-275    76-141 (472)
 35 4fbw_A DNA repair protein RAD3  96.0  0.0068 2.3E-07   64.5   5.9   55  219-275    12-78  (417)
 36 3t1i_A Double-strand break rep  95.9  0.0055 1.9E-07   65.5   4.9   55  220-276    32-98  (431)
 37 2qfp_A Purple acid phosphatase  95.9   0.011 3.9E-07   61.7   7.0   72  221-295   120-198 (424)
 38 1ute_A Protein (II purple acid  95.8  0.0044 1.5E-07   60.5   3.3   75  220-295     6-96  (313)
 39 1xzw_A Purple acid phosphatase  95.4    0.02 6.9E-07   60.0   6.7   72  221-295   127-205 (426)
 40 3qfk_A Uncharacterized protein  92.3   0.074 2.5E-06   57.7   3.8   67  221-293    20-112 (527)
 41 3tgh_A Glideosome-associated p  90.7   0.074 2.5E-06   54.9   1.6   74  221-295     4-87  (342)
 42 4h2g_A 5'-nucleotidase; dimer,  89.6    0.34 1.2E-05   52.7   5.7   66  222-293    27-117 (546)
 43 1hp1_A 5'-nucleotidase; metall  89.4    0.26 8.8E-06   53.1   4.5   69  221-294     9-95  (516)
 44 2z1a_A 5'-nucleotidase; metal-  88.8     0.3   1E-05   53.2   4.5   68  221-294    30-119 (552)
 45 1t71_A Phosphatase, conserved   85.5    0.36 1.2E-05   48.6   2.6   70  220-295     4-76  (281)
 46 3ztv_A NAD nucleotidase, NADN;  85.4    0.64 2.2E-05   51.0   4.7   66  222-293    14-105 (579)
 47 3ive_A Nucleotidase; structura  81.9    0.69 2.4E-05   49.8   3.1   65  222-293     8-96  (509)
 48 3gve_A YFKN protein; alpha-bet  80.8     1.2   4E-05   45.8   4.2   43  222-265    13-71  (341)
 49 3c9f_A 5'-nucleotidase; 2',3'-  79.6    0.78 2.7E-05   50.3   2.6   70  221-295    16-108 (557)
 50 3jyf_A 2',3'-cyclic nucleotide  78.4     1.1 3.9E-05   45.9   3.2   43  222-265    10-68  (339)
 51 2wdc_A SOXB, sulfur oxidation   77.2     1.1 3.7E-05   49.2   2.8   38  250-293   124-166 (562)
 52 2f3o_A PFLD, PFL2, pyruvate fo  75.4     1.8 6.3E-05   49.3   4.1  109   62-175   197-307 (776)
 53 1t70_A Phosphatase; crystal, X  69.4     5.3 0.00018   39.5   5.3   67  221-295     1-70  (255)
 54 2z06_A Putative uncharacterize  64.3     7.5 0.00026   38.4   5.3   67  221-295     1-70  (252)
 55 2y8n_A 4-hydroxyphenylacetate   64.0     2.9 9.9E-05   48.4   2.5  113   59-175   266-380 (897)
 56 4h1s_A 5'-nucleotidase; hydrol  63.0     7.3 0.00025   41.8   5.3   66  222-293     5-95  (530)
 57 2yeq_A Apased, PHOD, alkaline   49.1      21 0.00073   38.5   6.1   34  221-260   117-153 (527)
 58 1r9d_A Glycerol dehydratase; r  43.4      15 0.00053   41.9   4.0   59   63-122   207-267 (787)
 59 3bu8_A Telomeric repeat-bindin  30.6 1.1E+02  0.0039   29.7   7.1  106    8-124    30-139 (235)
 60 2h5n_A Hypothetical protein PG  24.2 1.2E+02  0.0042   26.3   5.8   37   86-122    75-115 (133)

No 1  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00  E-value=1.6e-77  Score=616.92  Aligned_cols=309  Identities=34%  Similarity=0.597  Sum_probs=288.1

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecC
Q 009133          150 QDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDI  229 (542)
Q Consensus       150 ~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDI  229 (542)
                      ++||++   +++++|.+|++++++.|+.++         .|+++++.+||.+|+++|++||++++++.|.+++++|||||
T Consensus         1 y~gp~l---~~~~~~~~~~~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDI   68 (315)
T 3h63_A            1 YSGPKL---EDGKVTISFMKELMQWYKDQK---------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDT   68 (315)
T ss_dssp             CCSCCC---BTTBCCHHHHHHHHHHHHTTC---------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCC
T ss_pred             CCCCcC---CCCCCCHHHHHHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecC
Confidence            468999   566899999999999999764         48899999999999999999999999999888999999999


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHH
Q 009133          230 LGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTK  309 (542)
Q Consensus       230 HG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~k  309 (542)
                      |||+++|.++|+ ..|+++.+++|||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||+.||..+
T Consensus        69 HG~~~~L~~ll~-~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k  147 (315)
T 3h63_A           69 HGQFYDLLNIFE-LNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAK  147 (315)
T ss_dssp             TTCHHHHHHHHH-HHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHH
T ss_pred             CCCHHHHHHHHH-HhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHH
Confidence            999999999999 9999988777999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCC
Q 009133          310 FGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPE  389 (542)
Q Consensus       310 y~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~  389 (542)
                      |+..    +|+.+.++|++||+++++++++||||||+++.                    .+.++++|+++.|+. ++|+
T Consensus       148 ~~~~----l~~~~~~~f~~LPla~ii~~~il~vHGGl~sp--------------------~~~~l~~i~~i~R~~-~~p~  202 (315)
T 3h63_A          148 YTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSE--------------------DGVTLDDIRKIERNR-QPPD  202 (315)
T ss_dssp             SCHH----HHHHHHHHHTTSCSEEEETTTEEECSSCCCSS--------------------TTCCHHHHHHCCCSS-CCCS
T ss_pred             hhhH----HHHHHHHHHhcCCcEEEEcCCEEEeCCCCCCc--------------------ccCCHHHHHhCcccc-cccc
Confidence            9754    99999999999999999999999999999432                    357999999999996 6678


Q ss_pred             ccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeE
Q 009133          390 NDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGEL  469 (542)
Q Consensus       390 ~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkl  469 (542)
                      +++++|+|||||....||.+|.||+|+.||++++++||++|++++||||||+            +++||++.|+   |+|
T Consensus       203 ~g~~~dllWsDP~~~~g~~~s~RG~g~~fg~~~~~~fl~~n~l~~iiR~Hq~------------~~~Gy~~~~~---~~~  267 (315)
T 3h63_A          203 SGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEV------------KAEGYEVAHG---GRC  267 (315)
T ss_dssp             SSHHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSC------------CTTSEEEEGG---GTE
T ss_pred             cchhhhheecCCCCCCCcCcCCCCceEEECHHHHHHHHHHcCCcEEEEecee------------ecCCeEEecC---CeE
Confidence            8999999999999999999999999999999999999999999999999997            5899999985   999


Q ss_pred             EEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC-CCCCCC
Q 009133          470 YTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEV  514 (542)
Q Consensus       470 iTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~~  514 (542)
                      ||||||||||  +.++|+||+|.+++++ .+|+|+||++ |||.++
T Consensus       268 iTvfSapnY~--~~~~N~~a~~~~~~~~-~~~~~~~f~~~~~~~~~  310 (315)
T 3h63_A          268 VTVFSAPNYC--DQMGNKASYIHLQGSD-LRPQFHQFTAVPHPNVK  310 (315)
T ss_dssp             EEECCCTTGG--GTSCCCEEEEEEETTE-EEEEEEEECCCCCCSCC
T ss_pred             EEEECCcccC--CCCCccEEEEEEECCC-CeEeeEEEecCCCCCCC
Confidence            9999999999  5799999999998654 5899999999 999877


No 2  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00  E-value=3.6e-76  Score=611.19  Aligned_cols=316  Identities=32%  Similarity=0.573  Sum_probs=278.9

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHH-HHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecC--CCCceEE
Q 009133          149 EQDTLPLSWPRNGRISLEWIQLLI-STFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVR--EDSEVIV  225 (542)
Q Consensus       149 ~~~~p~l~~p~~~~it~~~i~~l~-~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~--~~~~i~V  225 (542)
                      ++.||++.+     +|.+|+..++ +.|+.++         .|+++++.+||.+|+++|++||++++++.|  ++++++|
T Consensus         3 ~y~g~~~~~-----~~~~~~~~~i~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~v   68 (335)
T 3icf_A            3 AFKGAKIKN-----MSQEFISKMVNDLFLKGK---------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISV   68 (335)
T ss_dssp             --------------CCHHHHHHHHHHTGGGTC---------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEE
T ss_pred             CCCCCccCC-----CCHHHHHHHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEE
Confidence            568999965     4999999999 9998653         588999999999999999999999999987  7788999


Q ss_pred             EecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHH
Q 009133          226 VGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAE  305 (542)
Q Consensus       226 IGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E  305 (542)
                      |||||||+++|.++|+ ..|+++.++.|||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||..|
T Consensus        69 iGDIHG~~~~L~~ll~-~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e  147 (335)
T 3icf_A           69 CGDTHGQFYDVLNLFR-KFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDE  147 (335)
T ss_dssp             ECCCTTCHHHHHHHHH-HHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHH
T ss_pred             EecCCCCHHHHHHHHH-HcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchH
Confidence            9999999999999999 999988777799999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhcccc
Q 009133          306 LCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLE  385 (542)
Q Consensus       306 ~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~  385 (542)
                      |..+|+.    .+|+.+.++|++||+++++++++||||||+++.                    .+.++++|+++.|+. 
T Consensus       148 ~~~k~~~----~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp--------------------~~~~ld~i~~i~R~~-  202 (335)
T 3icf_A          148 CKYKYSQ----RIFNMFAQSFESLPLATLINNDYLVMHGGLPSD--------------------PSATLSDFKNIDRFA-  202 (335)
T ss_dssp             HHHHSCH----HHHHHHHHHHTTSCSEEEETTTEEECSSCCCSC--------------------TTCCHHHHHTCCCSS-
T ss_pred             hHhhccH----HHHHHHHHHHhhcceeEEEcCcEEEecCCcCCC--------------------ccCCHHHHHhCcccc-
Confidence            9999965    499999999999999999999999999999431                    356999999999985 


Q ss_pred             CCCCccccccccccCCCCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCC
Q 009133          386 DVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV  465 (542)
Q Consensus       386 ~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~  465 (542)
                      ++|..++++|+|||||....||.+|+||+|++||++++++||++|++++||||||+            +++||++.|+  
T Consensus       203 ~~p~~g~~~dlLWSDP~~~~g~~~s~RG~g~~FG~~~~~~fl~~n~l~~IiR~Hq~------------~~~Gy~~~~~--  268 (335)
T 3icf_A          203 QPPRDGAFMELLWADPQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHEL------------RMGGVQFEQK--  268 (335)
T ss_dssp             CCCSSSHHHHHHHCEECSSSSEEECCCC--EEECHHHHHHHHHHTTCSEEEECSSC------------CTEEEEEEGG--
T ss_pred             ccccccchhhhhccCCCCcCCcccCCCCCceeeCHHHHHHHHHHCCCeEEEEcCce------------ecCeEEEecC--
Confidence            67789999999999999999999999999999999999999999999999999997            5899999985  


Q ss_pred             CCeEEEEecCCCCCCCCCCCCceEEEEEeCC---------CCCCCeEEEecC-CCCCCC---CCccccc
Q 009133          466 SGELYTLFTAPNYPQVDGFDNVGAYAVLKPP---------LFDSPLFLQLKA-AEKPEV---WNFDVFY  521 (542)
Q Consensus       466 ~gkliTVFSApnY~~~~~~~N~gA~l~l~~~---------~~~~p~f~~f~~-~~p~~~---y~~~~~~  521 (542)
                       |+|||||||||||  +.++|+||+|.|+++         +..+++|+||++ |||..+   |+...|.
T Consensus       269 -~~liTvfSapnYc--~~~~N~~a~~~i~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~p~~y~~~~~~  334 (335)
T 3icf_A          269 -GKLMTVFSAPNYC--DSQGNLGGVIHVVPGHGILQAGRNDDQNLIIETFEAVEHPDIKPMAYSNGGFG  334 (335)
T ss_dssp             -GTEEEECCCTTGG--GTSCCEEEEEEECTTCCCCBTTTBCCTTEEEEEECCCCCCSCCTTTTC-----
T ss_pred             -CcEEEEECCcccC--CCCCCceEEEEEecccccccccccccCceeEEEEecCCCCCCCchhhcccccC
Confidence             9999999999999  579999999999883         125899999999 999877   9887764


No 3  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00  E-value=1.6e-71  Score=579.53  Aligned_cols=305  Identities=32%  Similarity=0.581  Sum_probs=270.9

Q ss_pred             CCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHH
Q 009133          157 WPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDL  236 (542)
Q Consensus       157 ~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL  236 (542)
                      |+.+|+.+.+.   |++.|+.++         .++++++.+||.+|+++|++||++++++    +|++||||||||+++|
T Consensus        22 ~~~~~~~~~~~---~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~ll~~~----~pi~ViGDIHG~~~dL   85 (357)
T 3ll8_A           22 FDNDGKPRVDI---LKAHLMKEG---------RLEESVALRIITEGASILRQEKNLLDID----APVTVCGDIHGQFFDL   85 (357)
T ss_dssp             BCTTSCBCHHH---HHHHHHTTC---------CBCHHHHHHHHHHHHHHHHTSCSEEEEC----SSEEEECCCTTCHHHH
T ss_pred             cCCCCCCCHHH---HHHHHHhCC---------CCCHHHHHHHHHHHHHHHHhCCCeEEec----ccceeeccCCCCHHHH
Confidence            45567777654   566776543         4889999999999999999999999997    6899999999999999


Q ss_pred             HHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchh
Q 009133          237 VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCK  316 (542)
Q Consensus       237 ~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~  316 (542)
                      .++|+ ..|.++.+. |||||||||||++|+||+.+|+++|+.||+++++||||||.+.++..|||++||..+|+.    
T Consensus        86 ~~ll~-~~g~~~~~~-~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~~----  159 (357)
T 3ll8_A           86 MKLFE-VGGSPANTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----  159 (357)
T ss_dssp             HHHHH-HHCCTTTCC-EEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----
T ss_pred             HHHHH-hcCCCCCcE-EEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccch----
Confidence            99999 888887765 999999999999999999999999999999999999999999999999999999999965    


Q ss_pred             hhhhhhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccc
Q 009133          317 LVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDV  396 (542)
Q Consensus       317 ~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DL  396 (542)
                      .+|+.+.++|++||+++++++++||||||+++                     ++.++++|+++.|+. ++|..++++|+
T Consensus       160 ~l~~~~~~~f~~LPlaaii~~~il~vHGGlsp---------------------~l~~ld~I~~i~R~~-e~p~~g~~~Dl  217 (357)
T 3ll8_A          160 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSP---------------------EINTLDDIRKLDRFK-EPPAYGPMCDI  217 (357)
T ss_dssp             HHHHHHHHHHHTSCSEEEETTTEEECSSCCCT---------------------TCCSHHHHHTCCCSS-CCCSSSHHHHH
T ss_pred             hHHHHHHHHHHhCCcceEEcccEEEEecCcCc---------------------ccCCHHHHhhccccc-cCCccCchhHh
Confidence            49999999999999999999999999999987                     457999999999986 67788999999


Q ss_pred             cccCCCCCC-------Ccccc-cCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCC---
Q 009133          397 LWSDPSSEA-------GLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV---  465 (542)
Q Consensus       397 LWSDP~~~~-------g~~~n-~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~---  465 (542)
                      |||||....       +|.+| .||+|++||++++++||++|++++||||||+            +++||++.|+..   
T Consensus       218 LWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiRaHq~------------~~~Gy~~~~~~~~~g  285 (357)
T 3ll8_A          218 LWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEA------------QDAGYRMYRKSQTTG  285 (357)
T ss_dssp             HHCEECTTTTSCSCCCSEEECTTTTSSEEECHHHHHHHHHHTTCSEEEECCSC------------CTTSEEECCBCTTTS
T ss_pred             hccCccccccccccccccccCCCCCCceEEChHHHHHHHHHCCCeEEEEeccc------------cccceEEecCCcCCC
Confidence            999999764       35554 5999999999999999999999999999997            589999988521   


Q ss_pred             CCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEecC-CCCCCCCC-cccccc
Q 009133          466 SGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEVWN-FDVFYF  522 (542)
Q Consensus       466 ~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~~y~-~~~~~~  522 (542)
                      .++|||||||||||  +.++|+||+|.++.+   ..+|.||++ |||...=+ .++|.|
T Consensus       286 ~~~liTvFSApnYc--~~~~N~~a~l~~~~~---~~~~~~f~~~~hp~~~p~~~~~f~w  339 (357)
T 3ll8_A          286 FPSLITIFSAPNYL--DVYNNKAAVLKYENN---VMNIRQFNCSPHPYWLPNFMDVFTW  339 (357)
T ss_dssp             SBSEEEECCCTTGG--GTSCCCEEEEEEETT---EEEEEEECCCCCCCCCGGGCCHHHH
T ss_pred             CCcEEEEECCCccC--CCCCccEEEEEEECC---cceEEEecCCCCCCcCCCcceeeEe
Confidence            13899999999999  579999999999875   468999999 99988822 356664


No 4  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00  E-value=1.3e-70  Score=561.89  Aligned_cols=270  Identities=34%  Similarity=0.643  Sum_probs=253.0

Q ss_pred             cCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH
Q 009133          188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL  267 (542)
Q Consensus       188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl  267 (542)
                      ..++++++.+||.+|+++|++||++++++    +|++||||||||+++|.++|+ ..|+++.+. |||||||||||++|+
T Consensus        27 ~~l~~~~~~~l~~~~~~il~~ep~ll~~~----~~i~viGDIHG~~~~L~~ll~-~~g~~~~~~-~vfLGD~VDrG~~s~  100 (299)
T 3e7a_A           27 VQLTENEIRGLCLKSREIFLSQPILLELE----APLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL  100 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCSEEEEC----SSEEEECBCTTCHHHHHHHHH-HHCSTTSSC-EEECSCCSSSSSCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHhCCCeeecC----CCEEEEecCCCCHHHHHHHHH-HhCCCCCcc-EEeCCcccCCCCCcH
Confidence            35899999999999999999999999997    689999999999999999999 999988766 999999999999999


Q ss_pred             HHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCC
Q 009133          268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF  347 (542)
Q Consensus       268 EvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs  347 (542)
                      ||+.+|+++|+.+|+++++||||||.+.++..|||++||..+|+.    .+|+.+.++|++||+++++++++|||||||+
T Consensus       101 evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~~----~l~~~~~~~f~~LPlaaii~~~il~vHGGls  176 (299)
T 3e7a_A          101 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCFNCLPIAAIVDEKIFCCHGGLS  176 (299)
T ss_dssp             HHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHHTTCCCEEEETTTEEEESSCCC
T ss_pred             HHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhhH----HHHHHHHHHHhhCCceEEECCeEEEEcCccC
Confidence            999999999999999999999999999999999999999999965    4999999999999999999999999999998


Q ss_pred             CCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCC-CCCcccccCCCeeeeChhhHHHH
Q 009133          348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEF  426 (542)
Q Consensus       348 ~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~-~~g~~~n~RG~G~~FG~d~~~~F  426 (542)
                      |                     ++.++++|+++.|+. ++|+.++++|+|||||.. ..||.+|+||+|++||++++++|
T Consensus       177 p---------------------~~~~l~~i~~i~R~~-~~p~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~f  234 (299)
T 3e7a_A          177 P---------------------DLQSMEQIRRIMRPT-DVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF  234 (299)
T ss_dssp             T---------------------TCCCTHHHHTCCSSC-CCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred             c---------------------ccCCHHHHHhccCCC-cCCcchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHH
Confidence            7                     357999999999996 667889999999999996 57999999999999999999999


Q ss_pred             HhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133          427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL  506 (542)
Q Consensus       427 L~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f  506 (542)
                      |++|++++||||||+            +++||++.|+   ++|||||||||||  +.++|+||+|.++++  ...+|++|
T Consensus       235 l~~n~l~~IiR~Hq~------------v~~Gy~~~~~---~~~iTvfSapnY~--~~~~N~~a~l~~~~~--~~~~~~~~  295 (299)
T 3e7a_A          235 LHKHDLDLICRAHQV------------VEDGYEFFAK---RQLVTLFSAPNYC--GEFDNAGAMMSVDET--LMCSFQIL  295 (299)
T ss_dssp             HHHHTCSEEEECCSC------------CTTSEEEETT---TTEEEEBCCSSGG--GTCCCCEEEEEECTT--CCEEEEEE
T ss_pred             HHHCCCeEEEEcCee------------eecceEEecC---CeEEEEECCcccC--CCCCccEEEEEECCC--CcEEEEEe
Confidence            999999999999997            5899999884   9999999999999  579999999999887  47889998


Q ss_pred             cC
Q 009133          507 KA  508 (542)
Q Consensus       507 ~~  508 (542)
                      ++
T Consensus       296 ~~  297 (299)
T 3e7a_A          296 KP  297 (299)
T ss_dssp             CC
T ss_pred             cC
Confidence            75


No 5  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00  E-value=9.3e-68  Score=568.31  Aligned_cols=350  Identities=33%  Similarity=0.592  Sum_probs=301.1

Q ss_pred             hhhhhhhhhhhHHhhhhhhhhhhhccchhhhhccCCCcccccCCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 009133          106 CNIVSKQRVFDSSLQGLLEELQVEVGSTMRERLVGGKLENLTKEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDP  183 (542)
Q Consensus       106 c~ki~k~~~fe~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~  183 (542)
                      |.+..++..|++|++...+.      ....+.+   +...+...+  .++.+   ..+.+|..++..+++.++...    
T Consensus       117 ~~~~~~~g~~~~A~~~~~~~------~~~~~~~---~~~al~~~~~~~~~~~---~~~~itl~~l~~lie~l~~~~----  180 (477)
T 1wao_1          117 CNKIVKQKAFERAIAGDEHK------RSVVDSL---DIESMTIEDEYSGPKL---EDGKVTISFMKELMQWYKDQK----  180 (477)
T ss_dssp             HHHHHHHHHHCCC------C------CSTTTCC---TTSSCCCCTTCCSCCC---GGGSCCHHHHHHHHHHHHTCC----
T ss_pred             HHHHHHHHHHHHHhcccccc------chhHhhh---hhhhcccccccccccc---ccccccHHHHHHHHHHHHcCC----
Confidence            33455677888888774322      1111111   334444444  45555   455789999999999998643    


Q ss_pred             cccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccC
Q 009133          184 KEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKG  263 (542)
Q Consensus       184 ~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG  263 (542)
                           .++..++..||.++.++|.++|++++++.|..++++||||||||+++|.++|+ ..|.++.++.|||+|||||||
T Consensus       181 -----~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~-~~~~~~~~~~~v~lGD~vdrG  254 (477)
T 1wao_1          181 -----KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFE-LNGLPSETNPYIFNGDFVDRG  254 (477)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHH-HHCCCBTTBCEEEESCCSSSS
T ss_pred             -----CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHH-HcCCCCCcCeEEEeccccCCC
Confidence                 47889999999999999999999999998878899999999999999999999 999988766799999999999


Q ss_pred             CchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEec
Q 009133          264 SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTH  343 (542)
Q Consensus       264 ~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vH  343 (542)
                      ++|+||+.+|+++|+.+|.+|++||||||.+.++..|||..|+..+|+..    +|+.+.++|++||+++++++++||||
T Consensus       255 ~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~lp~~~~~~~~~~~vH  330 (477)
T 1wao_1          255 SFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYELFSEVFEWLPLAQCINGKVLIMH  330 (477)
T ss_dssp             TTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCTT----HHHHHHHHHTTSCSEEEETTTEEECS
T ss_pred             cchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhHH----HHHHHHHHhccCCcEEEEcCcEEEEC
Confidence            99999999999999999999999999999999999999999999999875    99999999999999999999999999


Q ss_pred             cCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCCCCcccccCCCeeeeChhhH
Q 009133          344 GGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCT  423 (542)
Q Consensus       344 GGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G~~FG~d~~  423 (542)
                      ||+++.                    ...++++|+++.|+. ++|..++++|+|||||....||.+|.||.|+.||++++
T Consensus       331 gg~~~~--------------------~~~~l~~i~~~~r~~-~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~  389 (477)
T 1wao_1          331 GGLFSE--------------------DGVTLDDIRKIERNR-QPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVT  389 (477)
T ss_dssp             SCCCSS--------------------SCCCHHHHHTCCCSS-CCCSSSHHHHHHHCEECSSSSCEECTTSSSEEECHHHH
T ss_pred             CCCCcc--------------------ccCCHHHHHhccCCC-CCchhhhhhhhccCCCCccCCcCcCCCCCceeECHHHH
Confidence            999432                    235899999999985 67788999999999999999999999999999999999


Q ss_pred             HHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeE
Q 009133          424 EEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLF  503 (542)
Q Consensus       424 ~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f  503 (542)
                      ++||++||+++||||||+            +++||++.|+   |+|||||||||||  +.++|+||+|.|+.++ .+++|
T Consensus       390 ~~fl~~~~~~~iir~H~~------------~~~g~~~~~~---~~~~tvfsa~~y~--~~~~n~~~~~~~~~~~-~~~~~  451 (477)
T 1wao_1          390 KAFLEENNLDYIIRSHEV------------KAEGYEVAHG---GRCVTVFSAPNYC--DQMGNKASYIHLQGSD-LRPQF  451 (477)
T ss_dssp             HHHHHHTTCCEEEECCSC------------CTEEEEEEGG---GTEEEEBCCTTTT--SSSCCEEEEEEEETTE-EEEEE
T ss_pred             HHHHHHcCCeEEEECCCC------------CcCCeEEecC---CeEEEEeCCcccc--cCCCccEEEEEEECCC-CeEEE
Confidence            999999999999999997            5899999885   9999999999999  5799999999996544 58999


Q ss_pred             EEecC-CCCCCC---CCcccc
Q 009133          504 LQLKA-AEKPEV---WNFDVF  520 (542)
Q Consensus       504 ~~f~~-~~p~~~---y~~~~~  520 (542)
                      ++|++ |||.+.   |+++.+
T Consensus       452 ~~~~~~~~~~~~~~~~~~~~~  472 (477)
T 1wao_1          452 HQFTAVPHPNVKPMAYANTLL  472 (477)
T ss_dssp             EEECCCCCCSCCTTCSSCHHH
T ss_pred             EEEeCCCCCCCChhhhhhhhh
Confidence            99999 999877   877765


No 6  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00  E-value=2.6e-67  Score=540.49  Aligned_cols=293  Identities=32%  Similarity=0.577  Sum_probs=266.7

Q ss_pred             CCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHH
Q 009133          162 RISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFE  241 (542)
Q Consensus       162 ~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~  241 (542)
                      +++...+..+++.++..         +.++++++.+||.+|+++|++||++++++    ++++||||||||+++|.++|+
T Consensus         4 ~~~~~~~~~~i~~~~~~---------~~l~~~~~~~l~~~~~~il~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~   70 (309)
T 2ie4_C            4 KVFTKELDQWIEQLNEC---------KQLSESQVKSLCEKAKEILTKESNVQEVR----CPVTVCGDVHGQFHDLMELFR   70 (309)
T ss_dssp             --CHHHHHHHHHHHTTT---------CCCCHHHHHHHHHHHHHHHHHSCTTEEEC----SSEEEECCCTTCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHhCCCEEecc----CCEEEEecCCCCHHHHHHHHH
Confidence            45677889999988754         35899999999999999999999999997    789999999999999999999


Q ss_pred             HhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhh
Q 009133          242 ENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDK  321 (542)
Q Consensus       242 ~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~  321 (542)
                       ..|.++.+. |||+|||||||++|+||+.+|+++|..+|+++++||||||.+.++..|||..|+..+|+..   .+|+.
T Consensus        71 -~~~~~~~~~-~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~  145 (309)
T 2ie4_C           71 -IGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKY  145 (309)
T ss_dssp             -HHCCTTTSC-EEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHH
T ss_pred             -HcCCCCCCE-EEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHH
Confidence             888887766 9999999999999999999999999999999999999999999999999999999999865   59999


Q ss_pred             hhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCC
Q 009133          322 CLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDP  401 (542)
Q Consensus       322 ~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP  401 (542)
                      +.++|++||++++++++++|||||++|.                     +.++++++++.|+. ++|..+.++|+|||||
T Consensus       146 ~~~~~~~LPl~~~i~~~il~vHgGl~p~---------------------~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp  203 (309)
T 2ie4_C          146 FTDLFDYLPLTALVDGQIFCLHGGLSPS---------------------IDTLDHIRALDRLQ-EVPHEGPMCDLLWSDP  203 (309)
T ss_dssp             HHHHTTSSCSCEEETTTEEECSSCCCTT---------------------CCSHHHHHTSCCSS-CCCSSSHHHHHHHCEE
T ss_pred             HHHHHHhCCceEEEcCcEEEECCCCCCc---------------------ccCHHHHHhhcccc-cCChhHHHHHHhhCCC
Confidence            9999999999999999999999999874                     46899999999985 5667889999999999


Q ss_pred             CCCCCcccccCCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCC
Q 009133          402 SSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQV  481 (542)
Q Consensus       402 ~~~~g~~~n~RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~  481 (542)
                      ....+|.+|.||.|+.||++++++||++||+++||||||+            +.+||++.|+   ++|||||||||||  
T Consensus       204 ~~~~~~~~s~RG~g~~fG~~~~~~fl~~n~l~~iir~Hq~------------~~~G~~~~~~---~~~iTvfSa~ny~--  266 (309)
T 2ie4_C          204 DDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQL------------VMEGYNWCHD---RNVVTIFSAPNYC--  266 (309)
T ss_dssp             CSSSSEEECTTSSSEEECHHHHHHHHHHTTCSEEEECCSC------------CTEEEEEETT---TTEEEECCCSSGG--
T ss_pred             ccccccccCCCCcccccCHHHHHHHHHHcCCeEEEecCcc------------eeCCEEEecC---CeEEEEECCcccc--
Confidence            9999999999999999999999999999999999999997            5899999885   9999999999999  


Q ss_pred             CCCCCceEEEEEeCCCCCCCeEEEecC-CCCCC
Q 009133          482 DGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPE  513 (542)
Q Consensus       482 ~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~  513 (542)
                      ++++|+||+|.++.+  ..++|++|++ |+|..
T Consensus       267 ~~~~N~~a~l~i~~~--~~~~~~~~~~~~~~~~  297 (309)
T 2ie4_C          267 YRCGNQAAIMELDDT--LKYSFLQFDPAPRRGE  297 (309)
T ss_dssp             GTSCCEEEEEEECTT--CCEEEEEECCCC----
T ss_pred             cCCCCeEEEEEECCC--CcEeEEEEeCCCCccc
Confidence            578999999999876  5899999999 87743


No 7  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00  E-value=2.2e-67  Score=567.98  Aligned_cols=288  Identities=33%  Similarity=0.588  Sum_probs=260.7

Q ss_pred             HHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCC
Q 009133          169 QLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPS  248 (542)
Q Consensus       169 ~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~  248 (542)
                      ..+++.|+..+         .++.+++.+||.+|+++|++||++++++    ++++|||||||||++|.++|+ ..|.++
T Consensus        44 d~l~~~~~~~~---------~l~~~~i~~L~~~a~~il~~Ep~ll~l~----~pI~VIGDIHGq~~dL~~LL~-~~g~p~  109 (521)
T 1aui_A           44 DILKAHLMKEG---------RLEESVALRIITEGASILRQEKNLLDID----APVTVCGDIHGQFFDLMKLFE-VGGSPA  109 (521)
T ss_dssp             HHHHHHHHTTC---------CBCHHHHHHHHHHHHHHHHTSCSEEEEC----SSEEEECCCTTCHHHHHHHHH-HHCCTT
T ss_pred             HHHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHhCCCeEeec----cceeeccCCCCCHHHHHHHHH-hcCCCC
Confidence            45667776542         5889999999999999999999999997    789999999999999999999 888887


Q ss_pred             CCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcC
Q 009133          249 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRT  328 (542)
Q Consensus       249 ~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~  328 (542)
                      .+. |||||||||||++|+||+.+|+++|+.||+++++||||||.+.++..|||+.||..+|+.    .+|+.+.++|++
T Consensus       110 ~d~-yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~~----~l~~~~~~~f~~  184 (521)
T 1aui_A          110 NTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAFDC  184 (521)
T ss_dssp             TCC-EEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHHTT
T ss_pred             cce-EEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhhh----HHHHHHHHHHHh
Confidence            665 999999999999999999999999999999999999999999999999999999999975    499999999999


Q ss_pred             CCceEEeeceEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC----
Q 009133          329 LPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE----  404 (542)
Q Consensus       329 LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~----  404 (542)
                      ||+++++++++||||||++|                     .+.++++|+++.|+. ++|..++++|+|||||...    
T Consensus       185 LPlaaii~~~il~VHGGlsP---------------------~~~sld~I~~I~R~~-e~p~~g~~~DLLWSDP~~~~g~~  242 (521)
T 1aui_A          185 LPLAALMNQQFLCVHGGLSP---------------------EINTLDDIRKLDRFK-EPPAYGPMCDILWSDPLEDFGNE  242 (521)
T ss_dssp             SCCEEEETTTEEEESSCCCT---------------------TCCSHHHHHHSCCSS-SCCSSSHHHHHHHCEECTTTTSC
T ss_pred             CCceEEecCCceEECCCcCc---------------------ccCCHHHhhhccCCc-CCCccchhhhheecCcccccccc
Confidence            99999999999999999987                     457899999999986 6778899999999999975    


Q ss_pred             ---CCccccc-CCCeeeeChhhHHHHHhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCC---CCeEEEEecCCC
Q 009133          405 ---AGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV---SGELYTLFTAPN  477 (542)
Q Consensus       405 ---~g~~~n~-RG~G~~FG~d~~~~FL~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~---~gkliTVFSApn  477 (542)
                         .+|.+|. ||+|++||++++++||++||+++||||||+            +++||++.|+..   .++|||||||||
T Consensus       243 ~~~~~f~~ns~RG~g~~FG~d~v~~FL~~n~l~lIIRaHq~------------v~~Gy~~~~~~~~~g~~kliTVFSApN  310 (521)
T 1aui_A          243 KTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAPN  310 (521)
T ss_dssp             SSCCCEEECTTTTSSEEECHHHHHHHHHHTTCSEEEECCSC------------CTTSEEECCBCTTTSSBSEEEECCCSS
T ss_pred             ccCcceecccCCCcccccCHHHHHHHHHHcCCcEEEEccch------------hccceeeecCCcCCCCCeEEEEeCCcc
Confidence               3577775 999999999999999999999999999997            589999988521   127999999999


Q ss_pred             CCCCCCCCCceEEEEEeCCCCCCCeEEEecC-CCCCCC
Q 009133          478 YPQVDGFDNVGAYAVLKPPLFDSPLFLQLKA-AEKPEV  514 (542)
Q Consensus       478 Y~~~~~~~N~gA~l~l~~~~~~~p~f~~f~~-~~p~~~  514 (542)
                      ||  +.++|+||+|.++++   ..+|.||++ |||...
T Consensus       311 Yc--~~~~N~gAvl~i~~~---~~~~~~f~~~~~p~~~  343 (521)
T 1aui_A          311 YL--DVYNNKAAVLKYENN---VMNIRQFNCSPHPYWL  343 (521)
T ss_dssp             GG--GTSCCCEEEEEEETT---EEEEEEECCCCCCCCC
T ss_pred             cC--CCCCceEEEEEEeCC---cceEEEecCCCCCCcC
Confidence            99  578999999999876   478999999 999876


No 8  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00  E-value=1.1e-64  Score=525.10  Aligned_cols=273  Identities=34%  Similarity=0.642  Sum_probs=252.7

Q ss_pred             cCCCHHHHHHHHHHHHHHHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH
Q 009133          188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL  267 (542)
Q Consensus       188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl  267 (542)
                      ..++++++.+||.+|+++|++||++++++    ++++||||||||+++|.++|+ ..|+++.+. |||||||||||++|+
T Consensus        28 ~~l~~~~~~~l~~~~~~il~~e~~l~~~~----~~i~viGDIHG~~~~L~~ll~-~~g~~~~~~-~vflGD~VDRG~~s~  101 (330)
T 1fjm_A           28 VQLTENEIRGLCLKSREIFLSQPILLELE----APLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL  101 (330)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCSEEEEC----SSEEEECBCTTCHHHHHHHHH-HHCSTTSSC-EEECSCCSSSSSCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhCCCeEeec----CceEEecCCCCCHHHHHHHHH-HhCCCCcce-EEeCCCcCCCCCChH
Confidence            46999999999999999999999999997    789999999999999999999 999987766 999999999999999


Q ss_pred             HHHHHHHHhhhcCCCeEEEecCCccccccccccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCC
Q 009133          268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF  347 (542)
Q Consensus       268 EvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs  347 (542)
                      ||+.+|+++|+.+|.++++||||||.+.++..|||++|+..+|+.    .+|+.+.++|++||++++++++++|||||++
T Consensus       102 evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f~~LPl~~~i~~~i~~vHgGl~  177 (330)
T 1fjm_A          102 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCFNCLPIAAIVDEKIFCCHGGLS  177 (330)
T ss_dssp             HHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHHTTCCCEEEETTTEEEESSCCC
T ss_pred             HHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccH----HHHHHHHHHHHhCCceEEEcCcEEEEccCCC
Confidence            999999999999999999999999999999999999999999975    4999999999999999999999999999998


Q ss_pred             CCcCCCcccccccccccccccCCCCCHHHHHhhhccccCCCCccccccccccCCCCC-CCcccccCCCeeeeChhhHHHH
Q 009133          348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEEF  426 (542)
Q Consensus       348 ~~~~~~p~~~~~~~~~~~~~~l~l~sLddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~G~~FG~d~~~~F  426 (542)
                      |.                     +.++++++++.|+. ++++.++++|+|||||... .+|.+|.||.++.||++++++|
T Consensus       178 p~---------------------~~~l~qi~~i~r~~-e~~~~g~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~f  235 (330)
T 1fjm_A          178 PD---------------------LQSMEQIRRIMRPT-DVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF  235 (330)
T ss_dssp             TT---------------------CSCHHHHHHCCSSC-CCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred             cc---------------------cCCHHHHhhhhcCc-cCcccchHHHHHhcCCccccCCcCcccCCCceeeChHHHHHH
Confidence            73                     46899999999986 5667889999999999875 6899999999999999999999


Q ss_pred             HhHcCCeEEEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCCCCCCCeEEEe
Q 009133          427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPPLFDSPLFLQL  506 (542)
Q Consensus       427 L~~n~l~lIIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~~~~~p~f~~f  506 (542)
                      |+++++++||||||+            +.+||++.|   +++|||||||||||  +.++|+||+|.++.+  ..++|++|
T Consensus       236 l~~~~l~liir~Hq~------------v~~Gy~~~~---~~~lvTvfSapnY~--~~~~N~ga~l~i~~~--~~~~~~~~  296 (330)
T 1fjm_A          236 LHKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYC--GEFDNAGAMMSVDET--LMCSFQIL  296 (330)
T ss_dssp             HHHHTCSEEEECCSC------------CTTSEEEET---TTTEEEEBCCTTCC--SSSCCCEEEEEECTT--CCEEEEEE
T ss_pred             HHhCCCceEeccccc------------ccCCeEEcc---CCeEEEEeCCcccc--cCCCCcEEEEEECCC--CcEeEEEe
Confidence            999999999999997            589999877   49999999999999  579999999999876  47899999


Q ss_pred             cC-CCC
Q 009133          507 KA-AEK  511 (542)
Q Consensus       507 ~~-~~p  511 (542)
                      ++ |+.
T Consensus       297 ~~~~~~  302 (330)
T 1fjm_A          297 KPADKN  302 (330)
T ss_dssp             CCCC--
T ss_pred             cCCccc
Confidence            98 544


No 9  
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00  E-value=3.3e-42  Score=357.82  Aligned_cols=281  Identities=16%  Similarity=0.164  Sum_probs=207.4

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHH---------HHhcCCeeeeecCC
Q 009133          149 EQDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKI---------MREERNCVKLRVRE  219 (542)
Q Consensus       149 ~~~~p~l~~p~~~~it~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~i---------l~~ep~lv~l~~~~  219 (542)
                      +++||++.++.++++|..||.+  ..++..           ++.+++++++..+..+         |.++|+++..    
T Consensus         7 ~~~gp~~~~~~~~~~~~~~i~~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   69 (342)
T 2z72_A            7 EFDGPYVITPISGQSTAYWICD--NRLKTT-----------SIEKLQVNRPEHCGDLPETKLSSEIKQIMPDTYLG----   69 (342)
T ss_dssp             CEEEEEEECCSSSCCEEEEEET--TEEEEE-----------ECBTTEECCCTTCTTCCCEECCSSTTSCCCSEECC----
T ss_pred             CCCCCEEEEeCCCcEEEEEecC--ccceee-----------cccceEEeeeccccccChhhhhhhhcccCcceecC----
Confidence            4578999887788888888777  555432           1222222223333333         5556666655    


Q ss_pred             CCceEEEecCCCCHHHHHHHHHHhcCCCC-------CCceEEEeCCccccCCchHHHHHHHHHhhh---cCCCeEEEecC
Q 009133          220 DSEVIVVGDILGQFHDLVALFEENAGFPS-------DHRYFVFNGNYVDKGSWGLEVLLVLLAWKV---LMPHRVYLLRG  289 (542)
Q Consensus       220 ~~~i~VIGDIHG~~~dL~~il~~~~g~p~-------~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~---~~P~~v~lLRG  289 (542)
                      .++++|||||||++++|.++|+ ..+.++       ....+||+|||||||++|.||+.+|++++.   .+|.+++++||
T Consensus        70 ~~~i~vigDiHG~~~~l~~ll~-~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~G  148 (342)
T 2z72_A           70 IKKVVALSDVHGQYDVLLTLLK-KQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMG  148 (342)
T ss_dssp             CCEEEEECCCTTCHHHHHHHHH-HTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHH-hcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEec
Confidence            3799999999999999999999 887654       245699999999999999999999999986   79999999999


Q ss_pred             Ccccccccc-------ccChhHHHHHHhCccchhhhhh---hhhhhhcCCCceEEeeceEEEeccCCCCCcCCCcccccc
Q 009133          290 NHETKNCTL-------AYGFWAELCTKFGKKDCKLVFD---KCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCST  359 (542)
Q Consensus       290 NHE~~~~n~-------~yGF~~E~~~ky~~~~~~~l~~---~~~~~f~~LPlaaiI~~~il~vHGGIs~~~~~~p~~~~~  359 (542)
                      |||.+.++.       .|++..++   ++.. ...+|.   ...+|++.||+++.++ +++|||||++|...        
T Consensus       149 NHE~~~l~~~~~~~~~~~~~~~~~---~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~--------  215 (342)
T 2z72_A          149 NHEQMVLGGDLRYVHQRYDIATTL---INRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWI--------  215 (342)
T ss_dssp             HHHHHHHHTCCTTSCTTHHHHHHH---TTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHH--------
T ss_pred             CCcHHHhhCcccccccccchHHHH---hccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhc--------
Confidence            999988763       33443333   2222 234654   4567888889998876 79999999987420        


Q ss_pred             cccccccccCCCCCHHHHHhhhccccCCC----CccccccccccCCCCCCCcccccCCC-eeeeChhhHHHHHhHcCCeE
Q 009133          360 GEKRQKLDTLSLGSLREFAKVNRFLEDVP----ENDLLSDVLWSDPSSEAGLRENTKKF-GLLWGPDCTEEFLKENHLKL  434 (542)
Q Consensus       360 ~~~~~~~~~l~l~sLddI~~i~R~~~~p~----~~~l~~DLLWSDP~~~~g~~~n~RG~-G~~FG~d~~~~FL~~n~l~l  434 (542)
                               ..-.++++|+++.|+....+    ....++++|||||.+.  |   .||. +..||++++++||+.+++++
T Consensus       216 ---------~~~~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~~--w---~R~~~~~~fg~~~~~~fl~~~~~~~  281 (342)
T 2z72_A          216 ---------SRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPT--W---YRGYFSETFTEAELDTILQHFNVNH  281 (342)
T ss_dssp             ---------HTTCCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTSTT--T---CCGGGSTTCCHHHHHHHHHHHTCSE
T ss_pred             ---------ccCCCHHHHHHHhhhhccccccccccCHHHHhccCCCCCC--C---cCCcccccCChHHHHHHHHHCCCcE
Confidence                     01137999999888744322    2346789999998642  2   3666 56899999999999999999


Q ss_pred             EEEeccCCCCCCCCCCcccccCCceeeccCCCCeEEEEecCCCCCCCCCCCCceEEEEEeCC
Q 009133          435 IIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVDGFDNVGAYAVLKPP  496 (542)
Q Consensus       435 IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkliTVFSApnY~~~~~~~N~gA~l~l~~~  496 (542)
                      ||||||++             .+|...+   +|++|||||+++|      +|++|++.|+.+
T Consensus       282 IV~GHt~~-------------~~~~~~~---~~~~i~Idsg~~~------gg~la~l~i~~~  321 (342)
T 2z72_A          282 IVVGHTSQ-------------ERVLGLF---HNKVIAVDSSIKV------GKSGELLLLENN  321 (342)
T ss_dssp             EEECSSCC-------------SSCEEET---TTTEEECCCCGGG------SSCCCEEEEETT
T ss_pred             EEECCCcc-------------cchhhhc---CCCEEEEECCCCC------CCcEEEEEEECC
Confidence            99999962             3355545   4899999999998      388899999865


No 10 
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.97  E-value=6.6e-32  Score=273.60  Aligned_cols=189  Identities=20%  Similarity=0.285  Sum_probs=151.6

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY  300 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~y  300 (542)
                      ++++|||||||++++|.++++ ..+.++..+.+||+|||||||++|.|++.+|.++    |.+++++|||||.+.++..|
T Consensus         1 M~i~vigDiHG~~~~l~~ll~-~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~~~~   75 (280)
T 2dfj_A            1 MATYLIGDVHGCYDELIALLH-KVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLAVFA   75 (280)
T ss_dssp             -CEEEECCCCSCHHHHHHHHH-HTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHHHHT
T ss_pred             CeEEEEecCCCCHHHHHHHHH-HhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHhHhc
Confidence            468999999999999999999 8888555556999999999999999999999887    45899999999999999888


Q ss_pred             ChhHHHHHHhCcc--chhhhhhhhhhhhcCCCceEEeec-eEEEeccCCCCCcCCCcccccccccccccccCCCCCHHHH
Q 009133          301 GFWAELCTKFGKK--DCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREF  377 (542)
Q Consensus       301 GF~~E~~~ky~~~--~~~~l~~~~~~~f~~LPlaaiI~~-~il~vHGGIs~~~~~~p~~~~~~~~~~~~~~l~l~sLddI  377 (542)
                      ||.... .+....  .....+..+.++|+.||+++.+++ +++|||||++|..                      +++++
T Consensus        76 g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~----------------------~l~~~  132 (280)
T 2dfj_A           76 GISRNK-PKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW----------------------DLQTA  132 (280)
T ss_dssp             TSSCCC-GGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC----------------------CHHHH
T ss_pred             CCcccc-hhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc----------------------CHHHH
Confidence            876421 011000  011245667889999999988887 9999999998742                      68888


Q ss_pred             Hhhhcccc---CCCCccccccccccCCCCCCCcccccCCCe-eeeChhh--HHHHHhHcC-CeEEEEec
Q 009133          378 AKVNRFLE---DVPENDLLSDVLWSDPSSEAGLRENTKKFG-LLWGPDC--TEEFLKENH-LKLIIRSH  439 (542)
Q Consensus       378 ~~i~R~~~---~p~~~~l~~DLLWSDP~~~~g~~~n~RG~G-~~FG~d~--~~~FL~~n~-l~lIIRgH  439 (542)
                      +++.|...   ..++...++++||+||.  .+|.++.||.+ +.||.++  +.+||+.+| +++++|+|
T Consensus       133 ~~~~r~~e~~l~~~~~~~~~~~l~~d~~--~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~  199 (280)
T 2dfj_A          133 KECARDVEAVLSSDSYPFFLDAMYGDMP--NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKES  199 (280)
T ss_dssp             HHHHHHHHHHHHSTTHHHHHHHTTCSCC--CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSC
T ss_pred             HHHHHHHHHhhcCCcHHHHHHHhcCCCC--CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccC
Confidence            87776642   23455678899999985  67888899998 6799988  678999998 89999999


No 11 
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.88  E-value=9.1e-24  Score=211.29  Aligned_cols=135  Identities=23%  Similarity=0.274  Sum_probs=101.4

Q ss_pred             HHHhcCCeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeE
Q 009133          205 IMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRV  284 (542)
Q Consensus       205 il~~ep~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v  284 (542)
                      .+.++|++..+.    ++++|||||||++.+|.++++ ..+.......+||+|||||||+.+.|++.+|..+      .+
T Consensus         7 ~~~~~~~l~~~~----~~i~visDiHg~~~~l~~~l~-~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~   75 (262)
T 2qjc_A            7 GYANVVTLPNVT----GRVIIVGDIHGCRAQLEDLLR-AVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GA   75 (262)
T ss_dssp             -CCCEEECTTCC----SCEEEECCCTTCHHHHHHHHH-HHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TC
T ss_pred             ccCChhhhcCCC----CeEEEEeCCCCCHHHHHHHHH-HHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CC
Confidence            456677776664    689999999999999999999 7776654346999999999999999999988764      48


Q ss_pred             EEecCCccccccccccChhHH-HHHHhCccc-----hhhhhhhhhhhhcCCCceEEee-ceEEEeccCCCCCc
Q 009133          285 YLLRGNHETKNCTLAYGFWAE-LCTKFGKKD-----CKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRRT  350 (542)
Q Consensus       285 ~lLRGNHE~~~~n~~yGF~~E-~~~ky~~~~-----~~~l~~~~~~~f~~LPlaaiI~-~~il~vHGGIs~~~  350 (542)
                      ++++||||...++..+++..+ +..+++...     ...+.....++|+.||+++.++ ++++|||||++|..
T Consensus        76 ~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~  148 (262)
T 2qjc_A           76 YSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQR  148 (262)
T ss_dssp             EECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTS
T ss_pred             EEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCC
Confidence            999999999988877777654 334444321     1234566788999999998886 59999999998643


No 12 
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.85  E-value=2.8e-21  Score=186.93  Aligned_cols=131  Identities=20%  Similarity=0.216  Sum_probs=98.7

Q ss_pred             CeeeeecCCCCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCC
Q 009133          211 NCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGN  290 (542)
Q Consensus       211 ~lv~l~~~~~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGN  290 (542)
                      .+.+++.+..++++|||||||++.+|.++++ ..+.++..+.+||+|||||||+++.|++.+|..      ..+++++||
T Consensus         3 ~~~~~~~~~~~~i~visDiHg~~~~l~~~l~-~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GN   75 (221)
T 1g5b_A            3 YYEKIDGSKYRNIWVVGDLHGCYTNLMNKLD-TIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGN   75 (221)
T ss_dssp             SEEEEEGGGCSCEEEECCCTTCHHHHHHHHH-HHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCH
T ss_pred             ceeecCCCCCceEEEEEcCCCCHHHHHHHHH-HccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccC
Confidence            4556666666899999999999999999999 777654445699999999999999999887542      369999999


Q ss_pred             ccccccccccChhHH-HHHHhCcc-------chhhhhhhhhhhhcCCCceEEe---eceEEEeccCCCC
Q 009133          291 HETKNCTLAYGFWAE-LCTKFGKK-------DCKLVFDKCLECFRTLPLATII---AQGVYTTHGGLFR  348 (542)
Q Consensus       291 HE~~~~n~~yGF~~E-~~~ky~~~-------~~~~l~~~~~~~f~~LPlaaiI---~~~il~vHGGIs~  348 (542)
                      ||...++..+++... .+...+..       ....+++.+.++|+.||+++.+   +.+++|||||+++
T Consensus        76 hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~  144 (221)
T 1g5b_A           76 HEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPF  144 (221)
T ss_dssp             HHHHHHHHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCS
T ss_pred             cHHHHHhhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCCh
Confidence            999876644332211 11111111       1234677889999999999877   5789999999875


No 13 
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.56  E-value=1.9e-14  Score=141.29  Aligned_cols=114  Identities=17%  Similarity=0.148  Sum_probs=85.4

Q ss_pred             CCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccc
Q 009133          220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA  299 (542)
Q Consensus       220 ~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~  299 (542)
                      .+++.+||||||++..|.++++ ...   ....++++||++|+|+++.|++.+|..++     .+++++||||.......
T Consensus         3 ~mri~~isDiHg~~~~l~~~l~-~~~---~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~   73 (246)
T 3rqz_A            3 AMRILIISDVHANLVALEAVLS-DAG---RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRL   73 (246)
T ss_dssp             CCCEEEECCCTTCHHHHHHHHH-HHC---SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCC
T ss_pred             CcEEEEEeecCCCHHHHHHHHH-hcc---CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccC
Confidence            5789999999999999999999 665   33459999999999999999999998875     27999999998876532


Q ss_pred             cC--hh---HHHHHHhCccchhhhhhhhhhhhcCCCceEEeeceEEEeccCCC
Q 009133          300 YG--FW---AELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF  347 (542)
Q Consensus       300 yG--F~---~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~~~il~vHGGIs  347 (542)
                      ..  +.   .... .+.   ...+.....+++..||.... .++++++||+..
T Consensus        74 ~~~~~~~~~~~~~-~~~---~~~l~~~~~~~L~~lp~~~~-~~~i~~~Hg~p~  121 (246)
T 3rqz_A           74 SLDEFNPVARFAS-YWT---TMQLQAEHLQYLESLPNRMI-DGDWTVVHGSPR  121 (246)
T ss_dssp             CCC--CGGGGCHH-HHH---HHHCCHHHHHHHHHCCSEEE-ETTEEEESSCSS
T ss_pred             CccccCHHHHHHH-HHH---HHHcCHHHHHHHHhCCcEEE-ECCEEEEECCcC
Confidence            22  11   1111 111   12344566788899998765 468999999864


No 14 
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.52  E-value=3.3e-13  Score=131.65  Aligned_cols=122  Identities=17%  Similarity=0.135  Sum_probs=83.7

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcC---CC-CCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAG---FP-SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC  296 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g---~p-~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~  296 (542)
                      +++.+||||||++..|.++++ ...   .. .....+|++||++|+|+.+.+++.+|..+....  .+++++||||....
T Consensus         2 m~i~~isD~H~~~~~l~~~l~-~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD~~~~   78 (252)
T 1nnw_A            2 VYVAVLANIAGNLPALTAALS-RIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYDQIIA   78 (252)
T ss_dssp             CEEEEEECCTTCHHHHHHHHH-HHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHHHHHH
T ss_pred             cEEEEEeecCCCHHHHHHHHH-HHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchHHHhh
Confidence            579999999999999999988 443   22 133569999999999999999999988875323  49999999998765


Q ss_pred             ccccCh-----------hHHHHHHhCccchhhhhhhhhhhhcCCCceEEee---ceEEEeccCC
Q 009133          297 TLAYGF-----------WAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGL  346 (542)
Q Consensus       297 n~~yGF-----------~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~---~~il~vHGGI  346 (542)
                      .....+           .......+. .....+-....+++..||....+.   .+++++||++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p  141 (252)
T 1nnw_A           79 MSDPHATDPGYIDKLELPGHVKKALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP  141 (252)
T ss_dssp             HSCTTCSSSGGGGGSSCCHHHHHHHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred             ccccccCCcccccchhhhHHHHHHHH-HHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCC
Confidence            421110           000000000 001124445668888999876652   3899999986


No 15 
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.31  E-value=1.6e-12  Score=130.31  Aligned_cols=118  Identities=15%  Similarity=0.046  Sum_probs=85.0

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccccccc-
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA-  299 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~~-  299 (542)
                      .+|.|||||||++..|.++++ ....... ..+|++||+|++|+++.|++.+|..++     .++.++||||...++.. 
T Consensus        12 ~~i~~iSDiHg~~~~l~~vl~-~~~~~~~-D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~   84 (270)
T 3qfm_A           12 TKIALLSDIHGNTTALEAVLA-DARQLGV-DEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVR   84 (270)
T ss_dssp             EEEEEECCCTTCHHHHHHHHH-HHHHTTC-CEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHT
T ss_pred             cEEEEEecCCCCHHHHHHHHH-HHHhcCC-CEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhc
Confidence            479999999999999999998 5543333 349999999999999999999987763     58999999999876532 


Q ss_pred             --cChhHHHHHHhC---ccchhhhhhhhhhhhcCCCceEEe--e-ceEEEeccC
Q 009133          300 --YGFWAELCTKFG---KKDCKLVFDKCLECFRTLPLATII--A-QGVYTTHGG  345 (542)
Q Consensus       300 --yGF~~E~~~ky~---~~~~~~l~~~~~~~f~~LPlaaiI--~-~~il~vHGG  345 (542)
                        ++|.......+.   ......+.....+++..||....+  + .+++++||-
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~  138 (270)
T 3qfm_A           85 KELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHL  138 (270)
T ss_dssp             TCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSB
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECC
Confidence              333322111100   000123456678899999998765  2 489999955


No 16 
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.81  E-value=5.3e-09  Score=100.59  Aligned_cols=69  Identities=20%  Similarity=0.321  Sum_probs=54.9

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCC--------chHHHHHHHHHhhhcCCCeEEEecCCcc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGS--------WGLEVLLVLLAWKVLMPHRVYLLRGNHE  292 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~--------~SlEvL~lL~~LK~~~P~~v~lLRGNHE  292 (542)
                      +++.++||+||++..|.++++ ....... ..+|++||++|+|+        .+.+++.+|..+.    ..+++++||||
T Consensus        26 mki~~iSD~H~~~~~l~~~l~-~~~~~~~-d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD   99 (208)
T 1su1_A           26 MKLMFASDIHGSLPATERVLE-LFAQSGA-QWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCD   99 (208)
T ss_dssp             CEEEEECCCTTBHHHHHHHHH-HHHHHTC-SEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTC
T ss_pred             EEEEEEEcCCCCHHHHHHHHH-HHHhcCC-CEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCc
Confidence            579999999999999999888 4422222 45999999999998        3688888887664    36999999999


Q ss_pred             ccc
Q 009133          293 TKN  295 (542)
Q Consensus       293 ~~~  295 (542)
                      ...
T Consensus       100 ~~~  102 (208)
T 1su1_A          100 SEV  102 (208)
T ss_dssp             CHH
T ss_pred             hHH
Confidence            754


No 17 
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.46  E-value=8.3e-07  Score=85.42  Aligned_cols=93  Identities=19%  Similarity=0.280  Sum_probs=58.8

Q ss_pred             CceEEEecCCCCHHH--HHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccccccc
Q 009133          221 SEVIVVGDILGQFHD--LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTL  298 (542)
Q Consensus       221 ~~i~VIGDIHG~~~d--L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~~n~  298 (542)
                      +++.+++|+||++..  |.+.+.+..... ..+.+|++||++|     .+++..|..+.    ..+++++||||......
T Consensus        26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~~~~~   95 (215)
T 2a22_A           26 DLVLLIGDLKIPYGAKELPSNFRELLATD-KINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSAIFNP   95 (215)
T ss_dssp             EEEEEECCCCTTTTCSSCCGGGHHHHHCT-TCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCSCCBC
T ss_pred             cEEEEEecCCCCCChHHHHHHHHHHHhcC-CCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCccccc
Confidence            589999999997632  322222111111 2345999999998     47777766553    25999999999876431


Q ss_pred             ccChhHHHHHHhCccchhhhhhhhhhhhcCCCceEEee---ceEEEeccCC
Q 009133          299 AYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGL  346 (542)
Q Consensus       299 ~yGF~~E~~~ky~~~~~~~l~~~~~~~f~~LPlaaiI~---~~il~vHGGI  346 (542)
                      .                       .+++..+|....+.   .+++++||..
T Consensus        96 ~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~  123 (215)
T 2a22_A           96 D-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQ  123 (215)
T ss_dssp             C-----------------------GGGTBCCCSEEEEEETTEEEEEECSTT
T ss_pred             C-----------------------hhhHhhCCceEEEecCCeEEEEEcCCc
Confidence            0                       02345566554432   4799999864


No 18 
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.46  E-value=6.1e-07  Score=84.57  Aligned_cols=71  Identities=14%  Similarity=0.133  Sum_probs=47.9

Q ss_pred             CceEEEecCCCCHHHH-------------HHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEe
Q 009133          221 SEVIVVGDILGQFHDL-------------VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL  287 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL-------------~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lL  287 (542)
                      +++.+++|+|+....+             .++++.........+.+|++||++++|+...+++.+|..+.    ..++++
T Consensus         2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~v   77 (195)
T 1xm7_A            2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKILV   77 (195)
T ss_dssp             CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEEE
T ss_pred             cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEEE
Confidence            6799999999643321             22333111222233459999999999977777777776653    369999


Q ss_pred             cCCccccc
Q 009133          288 RGNHETKN  295 (542)
Q Consensus       288 RGNHE~~~  295 (542)
                      +||||...
T Consensus        78 ~GNhD~~~   85 (195)
T 1xm7_A           78 MGNHDKDK   85 (195)
T ss_dssp             CCTTCCCH
T ss_pred             eCCCCCch
Confidence            99999754


No 19 
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.43  E-value=2e-07  Score=86.65  Aligned_cols=59  Identities=14%  Similarity=0.037  Sum_probs=42.9

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      +++.++||+||++..|.++++ ....  ..+.++++||+.-      +++.   .+.   . .+++++||||...
T Consensus         7 m~i~~isD~H~~~~~~~~~~~-~~~~--~~d~i~~~GD~~~------~~l~---~l~---~-~~~~v~GNhD~~~   65 (176)
T 3ck2_A            7 QTIIVMSDSHGDSLIVEEVRD-RYVG--KVDAVFHNGDSEL------RPDS---PLW---E-GIRVVKGNMDFYA   65 (176)
T ss_dssp             EEEEEECCCTTCHHHHHHHHH-HHTT--TSSEEEECSCCCS------CTTC---GGG---T-TEEECCCTTCCST
T ss_pred             cEEEEEecCCCCHHHHHHHHH-Hhhc--CCCEEEECCCCch------HHHH---hhh---C-CeEEecCcccchh
Confidence            579999999999999999998 5543  3345999999721      2221   111   1 5999999999653


No 20 
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.43  E-value=1.5e-07  Score=88.62  Aligned_cols=62  Identities=18%  Similarity=0.270  Sum_probs=47.0

Q ss_pred             CceEEEecCCC--CHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCcccc
Q 009133          221 SEVIVVGDILG--QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK  294 (542)
Q Consensus       221 ~~i~VIGDIHG--~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~  294 (542)
                      +++.+++|+||  +...|.++++ ... . ..+.+|++||++|+     +++..|..+.    ..++.++||||..
T Consensus        23 mri~~iSD~Hg~~~~~~l~~~l~-~~~-~-~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~   86 (178)
T 2kkn_A           23 KRFLLISDSHVPVRMASLPDEIL-NSL-K-EYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP   86 (178)
T ss_dssp             EEEEEECCCCBTTTTCCCCHHHH-HGG-G-GCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred             eEEEEEecccCCCCHHHHHHHHH-HHh-c-CCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence            47999999997  7777888887 432 2 23459999999984     7777776652    2599999999965


No 21 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.38  E-value=3.8e-07  Score=86.00  Aligned_cols=72  Identities=10%  Similarity=0.092  Sum_probs=52.2

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      +++.++||+||.+..+.++++ ....... +.+|++||++|+|...-+...++-.++. .+..++.++||||...
T Consensus         6 mri~~iSD~H~~~~~~~~~~~-~~~~~~~-D~vi~~GDl~~~~~~~~~~~~~~~~l~~-~~~pv~~v~GNHD~~~   77 (228)
T 1uf3_A            6 RYILATSNPMGDLEALEKFVK-LAPDTGA-DAIALIGNLMPKAAKSRDYAAFFRILSE-AHLPTAYVPGPQDAPI   77 (228)
T ss_dssp             CEEEEEECCTTCHHHHHHHHT-HHHHHTC-SEEEEESCSSCTTCCHHHHHHHHHHHGG-GCSCEEEECCTTSCSH
T ss_pred             EEEEEEeeccCCHHHHHHHHH-HHhhcCC-CEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEECCCCCchh
Confidence            689999999999998888877 4321122 3599999999999666554444444442 2335999999999754


No 22 
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.36  E-value=1.2e-06  Score=82.58  Aligned_cols=65  Identities=22%  Similarity=0.217  Sum_probs=44.1

Q ss_pred             CceEEEecCCCCHH--HHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQFH--DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~~--dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      +++.+++|+||+..  .+...+.+.... ...+.+|++||++|     .+++..|..+.    ..+++++||||...
T Consensus        11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~~   77 (192)
T 1z2w_A           11 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDENL   77 (192)
T ss_dssp             CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCCT
T ss_pred             eEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCccc
Confidence            57999999999742  233333313222 22345999999997     56777666553    36999999999754


No 23 
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=98.25  E-value=0.00012  Score=72.95  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=47.4

Q ss_pred             CCCceEEEecCCC------------CHHHHHHHHHHhcCC-CCCCceEEEeCCccccCCch-HHHHH-HHHHhhhcCCCe
Q 009133          219 EDSEVIVVGDILG------------QFHDLVALFEENAGF-PSDHRYFVFNGNYVDKGSWG-LEVLL-VLLAWKVLMPHR  283 (542)
Q Consensus       219 ~~~~i~VIGDIHG------------~~~dL~~il~~~~g~-p~~~~~~VFLGDyVDRG~~S-lEvL~-lL~~LK~~~P~~  283 (542)
                      ..+++.+++|+|.            ....|.++++ .... ...-..+|++||++|.|... .+.+. .+-.+.....-.
T Consensus        24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~-~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~p  102 (330)
T 3ib7_A           24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLE-QLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAE  102 (330)
T ss_dssp             CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHH-HHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred             CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHH-HHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence            3478999999996            3677777777 3322 11234599999999999742 22222 222221112335


Q ss_pred             EEEecCCccc
Q 009133          284 VYLLRGNHET  293 (542)
Q Consensus       284 v~lLRGNHE~  293 (542)
                      +++++||||.
T Consensus       103 v~~v~GNHD~  112 (330)
T 3ib7_A          103 LVWVMGNHDD  112 (330)
T ss_dssp             EEECCCTTSC
T ss_pred             EEEeCCCCCC
Confidence            9999999996


No 24 
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.24  E-value=9.1e-07  Score=83.93  Aligned_cols=64  Identities=11%  Similarity=0.135  Sum_probs=48.6

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      +++.++||+||++..|.++++ ....... +.+|++||++|.     +++..|..+    +..+++++||||...
T Consensus        26 m~i~~iSD~Hg~~~~l~~~l~-~~~~~~~-D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~   89 (190)
T 1s3l_A           26 MKIGIMSDTHDHLPNIRKAIE-IFNDENV-ETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGER   89 (190)
T ss_dssp             CEEEEECCCTTCHHHHHHHHH-HHHHSCC-SEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCH
T ss_pred             eEEEEEeeCCCCHHHHHHHHH-HHhhcCC-CEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchH
Confidence            689999999999999999988 5432223 459999999984     555554332    347999999999765


No 25 
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.20  E-value=8e-07  Score=86.09  Aligned_cols=72  Identities=11%  Similarity=0.137  Sum_probs=50.5

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchH--------------------------HHHHHHH
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--------------------------EVLLVLL  274 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--------------------------EvL~lL~  274 (542)
                      ++|.+++|+||.+..|.++++ ....... +.+|++||++|+|..+.                          +...++-
T Consensus         6 mri~~iSDlH~~~~~~~~~l~-~~~~~~~-D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~   83 (260)
T 2yvt_A            6 RKVLAIKNFKERFDLLPKLKG-VIAEKQP-DILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR   83 (260)
T ss_dssp             CEEEEEECCTTCGGGHHHHHH-HHHHHCC-SEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeecCCChHHHHHHHH-HHHhcCC-CEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHH
Confidence            689999999999988888887 4322222 45999999999997531                          1233333


Q ss_pred             HhhhcCCCeEEEecCCccccc
Q 009133          275 AWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       275 ~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      .++. .+..++.++||||...
T Consensus        84 ~l~~-~~~pv~~v~GNHD~~~  103 (260)
T 2yvt_A           84 EIGE-LGVKTFVVPGKNDAPL  103 (260)
T ss_dssp             HHHT-TCSEEEEECCTTSCCH
T ss_pred             HHHh-cCCcEEEEcCCCCchh
Confidence            3432 2346999999999764


No 26 
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.73  E-value=5.9e-05  Score=72.99  Aligned_cols=71  Identities=17%  Similarity=0.150  Sum_probs=46.4

Q ss_pred             CceEEEecCCCCH------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHH-HhhhcCCCeEEEe
Q 009133          221 SEVIVVGDILGQF------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLL-AWKVLMPHRVYLL  287 (542)
Q Consensus       221 ~~i~VIGDIHG~~------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~-~LK~~~P~~v~lL  287 (542)
                      ++|.+++|+|+..            ..|.++++......+....+|++||+++.|..+.  +..+. .++ ..+-.++.+
T Consensus         1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~--~~~~~~~l~-~l~~p~~~v   77 (274)
T 3d03_A            1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEE--YQVARQILG-SLNYPLYLI   77 (274)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHH--HHHHHHHHT-TCSSCEEEE
T ss_pred             CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHH--HHHHHHHHH-hcCCCEEEE
Confidence            3689999999984            6777887732233222345999999999987532  11111 122 123349999


Q ss_pred             cCCcccc
Q 009133          288 RGNHETK  294 (542)
Q Consensus       288 RGNHE~~  294 (542)
                      +||||..
T Consensus        78 ~GNHD~~   84 (274)
T 3d03_A           78 PGNHDDK   84 (274)
T ss_dssp             CCTTSCH
T ss_pred             CCCCCCH
Confidence            9999974


No 27 
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=97.44  E-value=0.00011  Score=74.88  Aligned_cols=72  Identities=19%  Similarity=0.203  Sum_probs=43.5

Q ss_pred             CCceEEEecCC-C----C-----------HHHHHHHHHHhcCCCCCCceEEEeCC-ccccCCchHHH----HHHHHHhhh
Q 009133          220 DSEVIVVGDIL-G----Q-----------FHDLVALFEENAGFPSDHRYFVFNGN-YVDKGSWGLEV----LLVLLAWKV  278 (542)
Q Consensus       220 ~~~i~VIGDIH-G----~-----------~~dL~~il~~~~g~p~~~~~~VFLGD-yVDRG~~SlEv----L~lL~~LK~  278 (542)
                      .+++..++|+| |    +           ...|.++++ .+..... +.+|+.|| ++|++..+.+.    ..+|-.++.
T Consensus        18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~-~~~~~~~-D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~   95 (336)
T 2q8u_A           18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVE-EAEKREV-DLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR   95 (336)
T ss_dssp             EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHH-HHHHHTC-SEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHH-HHHHhCC-CEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence            47899999999 8    3           344555555 3221122 35999999 99999877664    333444432


Q ss_pred             cCCCeEEEecCCccccc
Q 009133          279 LMPHRVYLLRGNHETKN  295 (542)
Q Consensus       279 ~~P~~v~lLRGNHE~~~  295 (542)
                      ..  .++++.||||...
T Consensus        96 ~~--pv~~i~GNHD~~~  110 (336)
T 2q8u_A           96 TA--PVVVLPGNHDWKG  110 (336)
T ss_dssp             HS--CEEECCC------
T ss_pred             cC--CEEEECCCCCccc
Confidence            23  4999999999865


No 28 
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=97.38  E-value=9.2e-05  Score=72.79  Aligned_cols=72  Identities=17%  Similarity=-0.009  Sum_probs=46.9

Q ss_pred             CceEEEecCCCCH-------------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCc----hHHHHHHHHHhh
Q 009133          221 SEVIVVGDILGQF-------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSW----GLEVLLVLLAWK  277 (542)
Q Consensus       221 ~~i~VIGDIHG~~-------------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~----SlEvL~lL~~LK  277 (542)
                      .++.+++|+|...                   ..|.++++ ...... ...+|++||+++.|..    +.+.+..+....
T Consensus         6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~-~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l   83 (322)
T 2nxf_A            6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVL-QWRRER-VQCVVQLGDIIDGHNRRRDASDRALDTVMAEL   83 (322)
T ss_dssp             EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHH-HHHHTT-CSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred             eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHH-HHHhcC-CCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence            5799999999875                   55666666 322222 2459999999998752    233333333222


Q ss_pred             hcCCCeEEEecCCcccc
Q 009133          278 VLMPHRVYLLRGNHETK  294 (542)
Q Consensus       278 ~~~P~~v~lLRGNHE~~  294 (542)
                      ...+..++++.||||..
T Consensus        84 ~~~~~p~~~v~GNHD~~  100 (322)
T 2nxf_A           84 DACSVDVHHVWGNHEFY  100 (322)
T ss_dssp             HTTCSEEEECCCHHHHH
T ss_pred             HhcCCcEEEecCCCCcc
Confidence            22355799999999985


No 29 
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.33  E-value=0.00014  Score=74.17  Aligned_cols=66  Identities=17%  Similarity=0.213  Sum_probs=43.5

Q ss_pred             CCceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       220 ~~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      .++|.+++|+||....+    +    .+. .+.+|+.||++|+|..+ |.-.++-.|+......++++.||||...
T Consensus        59 ~mri~~iSD~H~~~~~l----~----i~~-~D~vi~aGDl~~~g~~~-e~~~~~~~L~~l~~~~v~~V~GNHD~~~  124 (296)
T 3rl5_A           59 HTRFVCISDTRSRTDGI----Q----MPY-GDILLHTGDFTELGLPS-EVKKFNDWLGNLPYEYKIVIAGNHELTF  124 (296)
T ss_dssp             EEEEEEEBCCTTCCTTC----C----CCS-CSEEEECSCCSSSCCHH-HHHHHHHHHHTSCCSEEEECCCTTCGGG
T ss_pred             CeEEEEEeeCCCCcchh----c----cCC-CCEEEECCcccCCCCHH-HHHHHHHHHHhCCCCeEEEEcCCccccc
Confidence            46899999999987543    2    233 34599999999999753 2222222222221135899999999754


No 30 
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=97.32  E-value=0.0003  Score=73.37  Aligned_cols=73  Identities=11%  Similarity=0.121  Sum_probs=48.1

Q ss_pred             CCceEEEecCCCCH-------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHH----HHHHHHhhhcCCC
Q 009133          220 DSEVIVVGDILGQF-------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV----LLVLLAWKVLMPH  282 (542)
Q Consensus       220 ~~~i~VIGDIHG~~-------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv----L~lL~~LK~~~P~  282 (542)
                      .++|..++|+|+..             ..|.++++ .+..... +.+|+.||++|++.-+.+.    ...|-.++. .+-
T Consensus        20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~-~~~~~~~-D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~   96 (386)
T 3av0_A           20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIK-KILEIKP-DVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNI   96 (386)
T ss_dssp             CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHH-HHHTTCC-SEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTC
T ss_pred             CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHH-HHHHcCC-CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCC
Confidence            47899999999762             34666666 4322222 3599999999999554433    233333321 234


Q ss_pred             eEEEecCCccccc
Q 009133          283 RVYLLRGNHETKN  295 (542)
Q Consensus       283 ~v~lLRGNHE~~~  295 (542)
                      .|+++.||||...
T Consensus        97 pv~~v~GNHD~~~  109 (386)
T 3av0_A           97 KVYIVAGNHEMPR  109 (386)
T ss_dssp             EEEECCCGGGSCS
T ss_pred             cEEEEcCCCCCCc
Confidence            6999999999765


No 31 
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=97.18  E-value=0.00032  Score=71.37  Aligned_cols=71  Identities=17%  Similarity=0.164  Sum_probs=45.2

Q ss_pred             CceEEEecCCCCH-------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHH----HHHhhhcCCCe
Q 009133          221 SEVIVVGDILGQF-------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLV----LLAWKVLMPHR  283 (542)
Q Consensus       221 ~~i~VIGDIHG~~-------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~l----L~~LK~~~P~~  283 (542)
                      +++..++|+|+..             ..|.++++ .+..... +.+|+.||++|++..+.+.+..    |-.++ ..+-.
T Consensus         1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~-~~~~~   77 (333)
T 1ii7_A            1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALE-IAVQENV-DFILIAGDLFHSSRPSPGTLKKAIALLQIPK-EHSIP   77 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHH-HHHHTTC-SEEEEESCSBSSSSCCHHHHHHHHHHHHHHH-TTTCC
T ss_pred             CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHH-HHHhcCC-CEEEECCCcCCCCCCCHHHHHHHHHHHHHHH-HCCCc
Confidence            4689999999864             33455555 3322222 3599999999998555444332    22332 12335


Q ss_pred             EEEecCCcccc
Q 009133          284 VYLLRGNHETK  294 (542)
Q Consensus       284 v~lLRGNHE~~  294 (542)
                      ++++.||||..
T Consensus        78 v~~v~GNHD~~   88 (333)
T 1ii7_A           78 VFAIEGNHDRT   88 (333)
T ss_dssp             EEEECCTTTCC
T ss_pred             EEEeCCcCCCc
Confidence            99999999986


No 32 
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.84  E-value=0.0012  Score=69.20  Aligned_cols=73  Identities=16%  Similarity=0.216  Sum_probs=46.2

Q ss_pred             CCceEEEecCCCC--------------------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCch--HHHHH
Q 009133          220 DSEVIVVGDILGQ--------------------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLL  271 (542)
Q Consensus       220 ~~~i~VIGDIHG~--------------------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--lEvL~  271 (542)
                      ..+|.+++|+|..                          ...|.++++ ....... ..+|++||+++.|...  .++..
T Consensus        39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-d~vi~~GDl~~~~~~~~~~~~~~  116 (443)
T 2xmo_A           39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLA-DVESKKT-DVLIISGDLTNNGEKTSHEELAK  116 (443)
T ss_dssp             CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHH-HHHHHTC-SEEEEESCCBSSCCHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHH-HHHHcCC-CEEEECCCCCCCCCHHHHHHHHH
Confidence            3579999999973                          345556655 2211122 3599999999998753  22223


Q ss_pred             HHHHhhhcCCCeEEEecCCccccc
Q 009133          272 VLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       272 lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      .|-.+. ..+-.++.++||||...
T Consensus       117 ~l~~l~-~~~~~~~~v~GNHD~~~  139 (443)
T 2xmo_A          117 KLTQVE-KNGTQVFVVPGNHDINN  139 (443)
T ss_dssp             HHHHHH-HTTCEEEEECCTTTSSC
T ss_pred             HHHHHH-hCCCeEEEECCcCCCCC
Confidence            333332 12346999999999854


No 33 
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=96.35  E-value=0.0015  Score=68.02  Aligned_cols=69  Identities=16%  Similarity=0.135  Sum_probs=44.3

Q ss_pred             CceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEeCCcc-ccCCchHHHHHH----HHHhhhc
Q 009133          221 SEVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYV-DKGSWGLEVLLV----LLAWKVL  279 (542)
Q Consensus       221 ~~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyV-DRG~~SlEvL~l----L~~LK~~  279 (542)
                      ++++.++|+|....                .|.++++ .+..... ..+|+.||++ |++..+.+.+..    |-.++..
T Consensus         1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~-~~~~~~~-D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~   78 (379)
T 3tho_B            1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVE-EAEKREV-DLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT   78 (379)
T ss_dssp             CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHH-HHHHHTC-SEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHH-HHHhcCC-CEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC
Confidence            46889999997543                4444444 2221122 3589999999 998777654433    3333322


Q ss_pred             CCCeEEEecCCccc
Q 009133          280 MPHRVYLLRGNHET  293 (542)
Q Consensus       280 ~P~~v~lLRGNHE~  293 (542)
                        -.++++.||||.
T Consensus        79 --~~v~~i~GNHD~   90 (379)
T 3tho_B           79 --APVVVLPGNQDW   90 (379)
T ss_dssp             --SCEEECCCTTSC
T ss_pred             --CCEEEEcCCCcc
Confidence              359999999993


No 34 
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=96.08  E-value=0.0053  Score=66.26  Aligned_cols=54  Identities=13%  Similarity=0.135  Sum_probs=38.6

Q ss_pred             CCceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHH
Q 009133          220 DSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLA  275 (542)
Q Consensus       220 ~~~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~  275 (542)
                      ..+++.++|+|-.            +..|.++++ .+..... +.+|+.||++|++.-+.+++..++.
T Consensus        76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~-~~~~~~~-D~VliaGDLfd~~~ps~~a~~~~~~  141 (472)
T 4fbk_A           76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILE-IARERDV-DMILLGGDIFHDNKPSRKALYQALR  141 (472)
T ss_dssp             CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHH-HHHHTTC-SEEEECSCSBSSSSCCHHHHHHHHH
T ss_pred             CeEEEEEecccCCCcccCcccchhHHHHHHHHHH-HHHhcCC-CEEEEcCccccCCCCCHHHHHHHHH
Confidence            4689999999964            335666666 3322222 4599999999999999888776543


No 35 
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=95.98  E-value=0.0068  Score=64.46  Aligned_cols=55  Identities=13%  Similarity=0.138  Sum_probs=39.6

Q ss_pred             CCCceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHH
Q 009133          219 EDSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLA  275 (542)
Q Consensus       219 ~~~~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~  275 (542)
                      ...+++.++|+|-.            +..|.++++ .+..... +.+|+.||++|++.-+.+++..++.
T Consensus        12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~-~~~~~~~-D~VliaGDLfd~~~p~~~~~~~~~~   78 (417)
T 4fbw_A           12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILE-IARERDV-DMILLGGDIFHDNKPSRKALYQALR   78 (417)
T ss_dssp             TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHH-HHHHTTC-SEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred             CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHH-HHHhcCC-CEEEEcCccccCCCCCHHHHHHHHH
Confidence            45789999999974            345666666 3322222 4599999999999999888776543


No 36 
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=95.92  E-value=0.0055  Score=65.48  Aligned_cols=55  Identities=16%  Similarity=0.181  Sum_probs=38.0

Q ss_pred             CCceEEEecCCCC------------HHHHHHHHHHhcCCCCCCceEEEeCCccccCCchHHHHHHHHHh
Q 009133          220 DSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW  276 (542)
Q Consensus       220 ~~~i~VIGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L  276 (542)
                      .++++.++|+|-.            +..|.++++ .+..... +.+|+.||++|++..+.+++..++..
T Consensus        32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~-~~~~~~~-D~VliaGDlfd~~~~~~~~~~~~~~~   98 (431)
T 3t1i_A           32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILR-LAQENEV-DFILLGGDLFHENKPSRKTLHTCLEL   98 (431)
T ss_dssp             EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHH-HHHHTTC-SEEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred             CEEEEEEeccCCCCcccccchhhhHHHHHHHHHH-HHhhcCC-CEEEEcCccccCCCCCHHHHHHHHHH
Confidence            4689999999953            235556665 3322223 35999999999999888877666543


No 37 
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=95.86  E-value=0.011  Score=61.74  Aligned_cols=72  Identities=15%  Similarity=0.140  Sum_probs=43.4

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCc------hHHH-HHHHHHhhhcCCCeEEEecCCccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW------GLEV-LLVLLAWKVLMPHRVYLLRGNHET  293 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~------SlEv-L~lL~~LK~~~P~~v~lLRGNHE~  293 (542)
                      .++.++||+|....... .++.....+.....+|++||+++.+..      ..+. ..++-.+....|  ++.+.||||.
T Consensus       120 ~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P--~~~v~GNHD~  196 (424)
T 2qfp_A          120 YTFGLIGDLGQSFDSNT-TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGNHEI  196 (424)
T ss_dssp             EEEEEECSCTTBHHHHH-HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCHHHH
T ss_pred             eEEEEEEeCCCCCChHH-HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCC--eEeecCCccc
Confidence            47999999998876543 333122322233459999999986432      1222 222333332334  8999999997


Q ss_pred             cc
Q 009133          294 KN  295 (542)
Q Consensus       294 ~~  295 (542)
                      ..
T Consensus       197 ~~  198 (424)
T 2qfp_A          197 EF  198 (424)
T ss_dssp             CC
T ss_pred             cc
Confidence            64


No 38 
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=95.79  E-value=0.0044  Score=60.51  Aligned_cols=75  Identities=13%  Similarity=0.015  Sum_probs=40.6

Q ss_pred             CCceEEEecCCCCH---------HHHHHHHHHhcCCCCCCceEEEeCCcccc-CC---chHHHHHHHHHhhh--cC-CCe
Q 009133          220 DSEVIVVGDILGQF---------HDLVALFEENAGFPSDHRYFVFNGNYVDK-GS---WGLEVLLVLLAWKV--LM-PHR  283 (542)
Q Consensus       220 ~~~i~VIGDIHG~~---------~dL~~il~~~~g~p~~~~~~VFLGDyVDR-G~---~SlEvL~lL~~LK~--~~-P~~  283 (542)
                      ..++.++||+|+..         ..+.+.+........ -..+|++||+++. |.   ...+....+..+..  .. +-.
T Consensus         6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~-~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p   84 (313)
T 1ute_A            6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLG-ADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP   84 (313)
T ss_dssp             CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHC-CSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred             ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcC-CCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence            45899999999862         244444431121112 2359999999743 21   11122222211110  12 346


Q ss_pred             EEEecCCccccc
Q 009133          284 VYLLRGNHETKN  295 (542)
Q Consensus       284 v~lLRGNHE~~~  295 (542)
                      ++.+.||||...
T Consensus        85 ~~~v~GNHD~~~   96 (313)
T 1ute_A           85 WHVLAGNHDHLG   96 (313)
T ss_dssp             EEECCCHHHHHS
T ss_pred             EEEECCCCccCC
Confidence            999999999753


No 39 
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=95.37  E-value=0.02  Score=59.96  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=41.6

Q ss_pred             CceEEEecCCCCHHHHHHHHHHhcCCCCCCceEEEeCCccccCCc------hHHH-HHHHHHhhhcCCCeEEEecCCccc
Q 009133          221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW------GLEV-LLVLLAWKVLMPHRVYLLRGNHET  293 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~------SlEv-L~lL~~LK~~~P~~v~lLRGNHE~  293 (542)
                      .++.++||+|...... ..++.....+..-..+|++||+++.+..      ..+. ...+-.+....|  ++.+.||||.
T Consensus       127 ~~f~~~gD~~~~~~~~-~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P--~~~v~GNHD~  203 (426)
T 1xzw_A          127 YVFGLIGDIGQTHDSN-TTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQP--WIWTAGNHEI  203 (426)
T ss_dssp             EEEEEECSCTTBHHHH-HHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EECCCCGGGC
T ss_pred             eEEEEEEeCCCCCchH-HHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCC--EEEecccccc
Confidence            4799999999875332 2222122222233459999999975321      1221 222333333334  8999999998


Q ss_pred             cc
Q 009133          294 KN  295 (542)
Q Consensus       294 ~~  295 (542)
                      ..
T Consensus       204 ~~  205 (426)
T 1xzw_A          204 DY  205 (426)
T ss_dssp             CC
T ss_pred             cc
Confidence            65


No 40 
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=92.35  E-value=0.074  Score=57.65  Aligned_cols=67  Identities=18%  Similarity=0.188  Sum_probs=41.2

Q ss_pred             CceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEeCCccccCCch----------HHHHHHHH
Q 009133          221 SEVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG----------LEVLLVLL  274 (542)
Q Consensus       221 ~~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S----------lEvL~lL~  274 (542)
                      -+|+.++|+||++.                .+..+++ .......+..+|..||.+++++.+          ..++..|-
T Consensus        20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~-~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln   98 (527)
T 3qfk_A           20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIE-QDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYN   98 (527)
T ss_dssp             EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHH-HHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHH
T ss_pred             EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHH-HHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHH
Confidence            36889999999862                5556665 222222233456789999987554          23444444


Q ss_pred             HhhhcCCCeEEEecCCccc
Q 009133          275 AWKVLMPHRVYLLRGNHET  293 (542)
Q Consensus       275 ~LK~~~P~~v~lLRGNHE~  293 (542)
                      .+.   +  -++..||||.
T Consensus        99 ~lg---~--D~~t~GNHef  112 (527)
T 3qfk_A           99 RMA---F--DFGTLGNHEF  112 (527)
T ss_dssp             HTC---C--CEECCCGGGG
T ss_pred             hcC---C--cEEecccccc
Confidence            442   2  2456899993


No 41 
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=90.74  E-value=0.074  Score=54.89  Aligned_cols=74  Identities=14%  Similarity=0.100  Sum_probs=41.4

Q ss_pred             CceEEEecCCCCHHHHHH---HHHHhcCCCCCCceEEEeCCccccCCchH------HHHHHHHHhh-hcCCCeEEEecCC
Q 009133          221 SEVIVVGDILGQFHDLVA---LFEENAGFPSDHRYFVFNGNYVDKGSWGL------EVLLVLLAWK-VLMPHRVYLLRGN  290 (542)
Q Consensus       221 ~~i~VIGDIHG~~~dL~~---il~~~~g~p~~~~~~VFLGDyVDRG~~Sl------EvL~lL~~LK-~~~P~~v~lLRGN  290 (542)
                      -+++++||.|.-...-.+   .+.+.+... ..+.+|++||.++.|..+.      +.+..++... ....--++.+.||
T Consensus         4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~-~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGN   82 (342)
T 3tgh_A            4 LRFASLGDWGKDTKGQILNAKYFKQFIKNE-RVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGT   82 (342)
T ss_dssp             EEEEECCSCBSCCHHHHHHHHHHHHHHHHT-TCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCH
T ss_pred             EEEEEEecCCCCCchHHHHHHHHHHHHhhc-CCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCC
Confidence            368999999974432221   121122112 2245999999998887532      2222222110 1122348999999


Q ss_pred             ccccc
Q 009133          291 HETKN  295 (542)
Q Consensus       291 HE~~~  295 (542)
                      ||..-
T Consensus        83 HD~~~   87 (342)
T 3tgh_A           83 RDWTG   87 (342)
T ss_dssp             HHHTS
T ss_pred             CccCC
Confidence            99764


No 42 
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=89.56  E-value=0.34  Score=52.72  Aligned_cols=66  Identities=17%  Similarity=0.215  Sum_probs=41.4

Q ss_pred             ceEEEecCCCCH--------------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCch-----HHHHHHHHHh
Q 009133          222 EVIVVGDILGQF--------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAW  276 (542)
Q Consensus       222 ~i~VIGDIHG~~--------------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~L  276 (542)
                      +|+-++|+||++                    ..+..+++ .......+..+|+.||.++..+.+     ..++..|-.+
T Consensus        27 ~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~l  105 (546)
T 4h2g_A           27 TILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQ-QIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL  105 (546)
T ss_dssp             EEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHH-HHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHH
T ss_pred             EEEEecccccCCcccccccccccccccccCCHHHHHHHHH-HHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHhc
Confidence            589999999864                    44556665 221112234578899999987654     3344444444


Q ss_pred             hhcCCCeEEEecCCccc
Q 009133          277 KVLMPHRVYLLRGNHET  293 (542)
Q Consensus       277 K~~~P~~v~lLRGNHE~  293 (542)
                      .   ++  ++..||||.
T Consensus       106 g---~d--~~~~GNHEf  117 (546)
T 4h2g_A          106 R---YD--AMALGNHEF  117 (546)
T ss_dssp             T---CS--EEECCGGGG
T ss_pred             C---Cc--EEeccCccc
Confidence            3   22  466899995


No 43 
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=89.35  E-value=0.26  Score=53.08  Aligned_cols=69  Identities=14%  Similarity=0.057  Sum_probs=40.8

Q ss_pred             CceEEEecCCCCHH----------HHHHHHHH---hcCCCCCCceEEEeCCccccCCch-----HHHHHHHHHhhhcCCC
Q 009133          221 SEVIVVGDILGQFH----------DLVALFEE---NAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH  282 (542)
Q Consensus       221 ~~i~VIGDIHG~~~----------dL~~il~~---~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~  282 (542)
                      .+|+.++|+||.+.          .+..++++   .......+..+|..||+++..+.+     ..++..|-.+.   + 
T Consensus         9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~-   84 (516)
T 1hp1_A            9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y-   84 (516)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C-
T ss_pred             EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---C-
Confidence            35889999999743          35555541   110011234588999999765533     23444444443   2 


Q ss_pred             eEEEecCCcccc
Q 009133          283 RVYLLRGNHETK  294 (542)
Q Consensus       283 ~v~lLRGNHE~~  294 (542)
                       .++..||||..
T Consensus        85 -d~~~~GNHEfd   95 (516)
T 1hp1_A           85 -DAMAIGNHEFD   95 (516)
T ss_dssp             -CEEECCGGGGS
T ss_pred             -CEEeecccccc
Confidence             25678999973


No 44 
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=88.78  E-value=0.3  Score=53.19  Aligned_cols=68  Identities=18%  Similarity=0.176  Sum_probs=41.6

Q ss_pred             CceEEEecCCCCH-----------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCch-----HHHHHHHHHhhh
Q 009133          221 SEVIVVGDILGQF-----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKV  278 (542)
Q Consensus       221 ~~i~VIGDIHG~~-----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~  278 (542)
                      -+|+.++|+||++                 ..+..+++ .......+..+|..||++++.+.+     ..++..|-.+  
T Consensus        30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~-~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l--  106 (552)
T 2z1a_A           30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFD-RVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL--  106 (552)
T ss_dssp             EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHH-HHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT--
T ss_pred             EEEEEEcccccCcccccccCcccccccCCHHHHHHHHH-HHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc--
Confidence            3688999999863                 45666665 221111234578899999987643     2344444333  


Q ss_pred             cCCCeEEEecCCcccc
Q 009133          279 LMPHRVYLLRGNHETK  294 (542)
Q Consensus       279 ~~P~~v~lLRGNHE~~  294 (542)
                       .++  +...||||..
T Consensus       107 -g~d--~~~lGNHEfd  119 (552)
T 2z1a_A          107 -RYR--AMALGNHEFD  119 (552)
T ss_dssp             -TCC--EEECCGGGGT
T ss_pred             -CCC--cccccccccc
Confidence             232  5677999964


No 45 
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=85.47  E-value=0.36  Score=48.61  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=42.3

Q ss_pred             CCceEEEecCCCCH--HHHHHHHHHhcCCCCCCceEEEeCCccccC-CchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          220 DSEVIVVGDILGQF--HDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       220 ~~~i~VIGDIHG~~--~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      .++|..+|||||..  ..+...+. ........+.++.+||-.--| ..+..+...|..+..    .+ +..||||.-.
T Consensus         4 ~m~ilf~GDv~G~~G~~~l~~~l~-~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da-~TlGNHefD~   76 (281)
T 1t71_A            4 SIKFIFLGDVYGKAGRNIIKNNLA-QLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV----NY-ITMGNHTWFQ   76 (281)
T ss_dssp             CCEEEEECEEBHHHHHHHHHTTHH-HHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTC----CE-EECCTTTTCC
T ss_pred             eEEEEEECCcCChHHHHHHHHHHH-HHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCC----CE-EEEccCcccC
Confidence            36899999999985  22333333 111000123578888877555 456677777776642    33 4459999765


No 46 
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=85.36  E-value=0.64  Score=51.00  Aligned_cols=66  Identities=18%  Similarity=0.225  Sum_probs=39.5

Q ss_pred             ceEEEecCCCCHH---------------------HHHHHHHHhcCCCCCCceEEEeCCccccCCc-----hHHHHHHHHH
Q 009133          222 EVIVVGDILGQFH---------------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW-----GLEVLLVLLA  275 (542)
Q Consensus       222 ~i~VIGDIHG~~~---------------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~-----SlEvL~lL~~  275 (542)
                      +|+-++|+||++.                     .+..+++ .......+..+|..||.++..+.     ...++..|-.
T Consensus        14 ~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~-~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~   92 (579)
T 3ztv_A           14 SILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLN-KLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNA   92 (579)
T ss_dssp             EEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHH-HHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHH
T ss_pred             EEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHH-HHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHh
Confidence            5889999999853                     3445554 22111223457889999997643     2334444444


Q ss_pred             hhhcCCCeEEEecCCccc
Q 009133          276 WKVLMPHRVYLLRGNHET  293 (542)
Q Consensus       276 LK~~~P~~v~lLRGNHE~  293 (542)
                      +.   ++  ++..||||.
T Consensus        93 lg---~D--~~tlGNHEf  105 (579)
T 3ztv_A           93 GN---FH--YFTLGNHEF  105 (579)
T ss_dssp             HT---CS--EEECCSGGG
T ss_pred             cC---cC--eeecccccc
Confidence            43   22  356799994


No 47 
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=81.88  E-value=0.69  Score=49.81  Aligned_cols=65  Identities=15%  Similarity=0.305  Sum_probs=35.6

Q ss_pred             ceEEEecCCCCH------------------HHHHHHHHHhcCCCCCCceEEE-eCCccccCCch-----HHHHHHHHHhh
Q 009133          222 EVIVVGDILGQF------------------HDLVALFEENAGFPSDHRYFVF-NGNYVDKGSWG-----LEVLLVLLAWK  277 (542)
Q Consensus       222 ~i~VIGDIHG~~------------------~dL~~il~~~~g~p~~~~~~VF-LGDyVDRG~~S-----lEvL~lL~~LK  277 (542)
                      +|+.+.|+||++                  ..+..+++ .......+. +++ .||.++....+     ..++..|   .
T Consensus         8 ~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~-~~r~~~~~~-llldaGD~~~g~~~~~~~~g~~~~~~l---n   82 (509)
T 3ive_A            8 TIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVK-QEKAKNKAT-WFFDAGDYFTGPYISSLTKGKAIIDIM---N   82 (509)
T ss_dssp             EEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHH-HHHHHCSSE-EEEECSCCSSSSHHHHTTTTHHHHHHH---T
T ss_pred             EEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHH-HHHhcCCCe-EEEECCCCCCCchhhhhcCChHHHHHH---H
Confidence            588999999874                  34555555 221112233 444 99999843222     2233333   2


Q ss_pred             hcCCCeEEEecCCccc
Q 009133          278 VLMPHRVYLLRGNHET  293 (542)
Q Consensus       278 ~~~P~~v~lLRGNHE~  293 (542)
                      ..-++  ++..||||.
T Consensus        83 ~lg~D--~~tlGNHEf   96 (509)
T 3ive_A           83 TMPFD--AVTIGNHEF   96 (509)
T ss_dssp             TSCCS--EECCCGGGG
T ss_pred             hcCCc--EEeeccccc
Confidence            22232  455799994


No 48 
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=80.75  E-value=1.2  Score=45.76  Aligned_cols=43  Identities=14%  Similarity=0.246  Sum_probs=26.7

Q ss_pred             ceEEEecCCCCH----------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCc
Q 009133          222 EVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSW  265 (542)
Q Consensus       222 ~i~VIGDIHG~~----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~  265 (542)
                      +|+-+.|+||++                ..+..+++ .......+..+|..||.+...+.
T Consensus        13 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~-~~r~~~~~~llld~GD~~qGs~~   71 (341)
T 3gve_A           13 SILATTDIHANMMDYDYYSDKETADFGLARTAQLIQ-KHREQNPNTLLVDNGDLIQGNPL   71 (341)
T ss_dssp             EEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHH-HHHHHCSSEEEEECSCCSCSSHH
T ss_pred             EEEEEeccCCCccCccccCCCccccCCHHHHHHHHH-HHHhcCCCEEEEecCccCCCcHH
Confidence            488999999986                33445554 21111224456789999976544


No 49 
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=79.62  E-value=0.78  Score=50.27  Aligned_cols=70  Identities=14%  Similarity=0.126  Sum_probs=38.7

Q ss_pred             CceEEEecCCCCH----------------HHHHHHHHHhcCCCCCCceEEEeCCccccCCchH-------HHHHHHHHhh
Q 009133          221 SEVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------EVLLVLLAWK  277 (542)
Q Consensus       221 ~~i~VIGDIHG~~----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------EvL~lL~~LK  277 (542)
                      -+|+-++|+||++                ..+...+++.......+..+|..||+++..+.+-       .++..|-.+.
T Consensus        16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg   95 (557)
T 3c9f_A           16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD   95 (557)
T ss_dssp             EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred             EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC
Confidence            3688999999974                2333344411100112334688999997644322       2344433332


Q ss_pred             hcCCCeEEEecCCccccc
Q 009133          278 VLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       278 ~~~P~~v~lLRGNHE~~~  295 (542)
                         .+  ++..||||...
T Consensus        96 ---~D--a~tlGNHEfD~  108 (557)
T 3c9f_A           96 ---YD--LLTIGNHELYL  108 (557)
T ss_dssp             ---CS--EECCCGGGSSS
T ss_pred             ---CC--EEeecchhccc
Confidence               22  45679999654


No 50 
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=78.36  E-value=1.1  Score=45.92  Aligned_cols=43  Identities=16%  Similarity=0.252  Sum_probs=26.6

Q ss_pred             ceEEEecCCCCHH----------------HHHHHHHHhcCCCCCCceEEEeCCccccCCc
Q 009133          222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW  265 (542)
Q Consensus       222 ~i~VIGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~  265 (542)
                      +|+-..|+||++.                .+..+++ .......+..+|..||.+...+.
T Consensus        10 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~-~~r~~~~n~llld~GD~~qGs~~   68 (339)
T 3jyf_A           10 RIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIE-QARAEVKNSVLVDNGDVIQGSPL   68 (339)
T ss_dssp             EEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHH-HHHHTCSCEEEEECSCCSSSSHH
T ss_pred             EEEEEeeCCCCcccccccCCCccccCCHHHHHHHHH-HHHhhCCCEEEEECCCCCCCchh
Confidence            4888999999863                3444554 22111233457889999974443


No 51 
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=77.17  E-value=1.1  Score=49.15  Aligned_cols=38  Identities=8%  Similarity=-0.033  Sum_probs=24.3

Q ss_pred             CceEEEeCCccccCCch-----HHHHHHHHHhhhcCCCeEEEecCCccc
Q 009133          250 HRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHET  293 (542)
Q Consensus       250 ~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~~v~lLRGNHE~  293 (542)
                      +..+|..||++++.+.+     ..++..|-.+.  ++  + +. ||||.
T Consensus       124 d~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~d--~-~~-GNHEf  166 (562)
T 2wdc_A          124 KALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--VD--H-MV-SHWEW  166 (562)
T ss_dssp             CEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--CC--E-EC-CSGGG
T ss_pred             CEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--Cc--E-Ee-cchhc
Confidence            34578899999976543     24445554443  33  3 46 99995


No 52 
>2f3o_A PFLD, PFL2, pyruvate formate-lyase 2; glycerol dehydratase, glycyl R hyperthermophilic, unknown function; HET: PGE; 2.90A {Archaeoglobus fulgidus}
Probab=75.39  E-value=1.8  Score=49.33  Aligned_cols=109  Identities=16%  Similarity=0.168  Sum_probs=67.1

Q ss_pred             HHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhccchhhhhcc
Q 009133           62 QLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTMRERLV  139 (542)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~~~~~~~~~~  139 (542)
                      ++.--+++.|+.-++|--+++.+++=+. |..+|+++++| +..|+++.  ..+.|.+|++.+.=-.-.-+.++....+.
T Consensus       197 ~A~~i~~eavi~~a~Rya~la~e~A~~e-d~~rk~EL~~i-a~~~~~v~~~pa~tf~EAlQ~~~f~~l~~~~E~ng~~~s  274 (776)
T 2f3o_A          197 QAAKIVSEAVINYGLRYSKLAEELAESE-DGERREELLKI-AEICRKVPAEKPETFWEAVQFVWLVQSALHQENYEQAIS  274 (776)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTC-CTHHHHHHHHH-HHHHHHTTTSCCCSHHHHHHHHHHHHHHHHHHSCSSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHH-HHHhCcCccCCCCCHHHHHHHHHHHHHHHhhcCCCCccc
Confidence            3334456777777888889998888787 87888888877 88999988  58899999987432110000011111122


Q ss_pred             CCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133          140 GGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF  175 (542)
Q Consensus       140 ~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~  175 (542)
                      -|.++..-.++=..-+   .+|.+|.+++++|++.|
T Consensus       275 ~GR~Dq~L~Pyy~~Dl---~~G~lt~eeA~Eli~~f  307 (776)
T 2f3o_A          275 MGRIDQYLYPFFKKDI---GEGRINRELAFDILANL  307 (776)
T ss_dssp             CCSHHHHSHHHHHHHT---TTTSSCHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence            2332222221100012   46789999999999976


No 53 
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=69.43  E-value=5.3  Score=39.51  Aligned_cols=67  Identities=18%  Similarity=0.172  Sum_probs=42.9

Q ss_pred             CceEEEecCCCCH--HHHHHHHHHhcCCCCCCceEEEeCCccccC-CchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQF--HDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~--~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      ++|..+|||=|..  ..+...+. ......  +.+|++|+-.--| ..+......|..+..    .+. ..||||.-.
T Consensus         1 m~ilf~GDv~g~~G~~~~~~~l~-~lr~~~--d~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~-TlGNHefD~   70 (255)
T 1t70_A            1 MRVLFIGDVFGQPGRRVLQNHLP-TIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGA----GCL-TLGNHAWHH   70 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHH-HHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTC----SEE-ECCTTTTSS
T ss_pred             CEEEEEeccCChHHHHHHHHHHH-HHHhhC--CEEEECCCCccCCcCCCHHHHHHHHhCCC----CEE-EeccccccC
Confidence            4789999997765  45566666 222112  4577887777555 456677777766642    344 449999764


No 54 
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=64.35  E-value=7.5  Score=38.38  Aligned_cols=67  Identities=15%  Similarity=0.148  Sum_probs=41.2

Q ss_pred             CceEEEecCCCCH--HHHHHHHHHhcCCCCCCceEEEeCC-ccccCCchHHHHHHHHHhhhcCCCeEEEecCCccccc
Q 009133          221 SEVIVVGDILGQF--HDLVALFEENAGFPSDHRYFVFNGN-YVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN  295 (542)
Q Consensus       221 ~~i~VIGDIHG~~--~dL~~il~~~~g~p~~~~~~VFLGD-yVDRG~~SlEvL~lL~~LK~~~P~~v~lLRGNHE~~~  295 (542)
                      ++|..+|||=|.-  ..+...+. ......  +.+|++|+ ....-..+.+....|..+..    .+. ..||||.-.
T Consensus         1 m~ilfiGDi~g~~G~~~v~~~l~-~lr~~~--d~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHefD~   70 (252)
T 2z06_A            1 MRVLFIGDVMAEPGLRAVGLHLP-DIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAWDH   70 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHH-HHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTTSC
T ss_pred             CEEEEEEecCCcccHHHHHHHHH-HHHhhC--CEEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEeeEC
Confidence            4789999996654  56666666 332222  34666655 44333356777777776642    443 559999765


No 55 
>2y8n_A 4-hydroxyphenylacetate decarboxylase large subuni; lyase, radical chemistry, metalloenzyme, iron-sulfur center; 1.75A {Clostridium scatologenes} PDB: 2yaj_A*
Probab=63.95  E-value=2.9  Score=48.36  Aligned_cols=113  Identities=15%  Similarity=0.056  Sum_probs=68.1

Q ss_pred             hHHHHHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhhhhhhhhhccchhhh
Q 009133           59 DAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGLLEELQVEVGSTMRE  136 (542)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~~~~~~~~~~~~~~~  136 (542)
                      +.-++.--+++.|+.-+++--+++.+++=+.-|...|+++++| +..|+.+.  +.+.|.+|+|.+.=-.-.-+.++...
T Consensus       266 ~fy~A~ii~~eavi~~a~RyA~laeelA~~e~d~~rk~EL~~i-a~~~~~v~~~pa~tf~EAlQ~~~f~~l~~~~e~ng~  344 (897)
T 2y8n_A          266 YYYAAMKEITKGLSAWCENYSKRAKYLASIETDSEIKANYEKI-EEVMGNIAHKKPANFWEAIQMTLCCHFGVVNEDPQS  344 (897)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHH-HHHHHHHTTSCCCSHHHHHHHHHHHHHHHHTTSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH-HHHhCccccCCCCCHHHHHHHHHHHHHHhhhccCCC
Confidence            3344444556778888888888888888777777788887777 88999988  58899999987432111000111111


Q ss_pred             hccCCCcccccCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 009133          137 RLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTF  175 (542)
Q Consensus       137 ~~~~~~~~~~~~~~~~p~l~~p~~~~it~~~i~~l~~~~  175 (542)
                      .+.-|.++..-.++=..-+   .+|.+|.+++.+|++.|
T Consensus       345 ~~s~GRlDq~L~PyyekDl---~~G~it~eeA~Ell~~~  380 (897)
T 2y8n_A          345 GLSIGRLGQVLQPFYEKDV---EDGIMTDEEVIELLELY  380 (897)
T ss_dssp             EEECBCHHHHSHHHHHHHH---HTTSCCHHHHHHHHHHH
T ss_pred             cccCCcHHHHHHHHHHhHH---hcCCCCHHHHHHHHHHH
Confidence            1222222222221100001   35778899888888865


No 56 
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=62.96  E-value=7.3  Score=41.84  Aligned_cols=66  Identities=17%  Similarity=0.211  Sum_probs=39.0

Q ss_pred             ceEEEecCCCCHH--------------------HHHHHHHHhcCCCCCCceEEEeCCccccCCch-----HHHHHHHHHh
Q 009133          222 EVIVVGDILGQFH--------------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAW  276 (542)
Q Consensus       222 ~i~VIGDIHG~~~--------------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~L  276 (542)
                      .|+-+.|+||++.                    .|..+++ ......++..+|..||.+...+.+     ..++.+|-++
T Consensus         5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~-~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~l   83 (530)
T 4h1s_A            5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQ-QIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL   83 (530)
T ss_dssp             EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHH-HHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHT
T ss_pred             EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHH-HHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhcc
Confidence            3777889998753                    3444554 221112345577899999865543     2334444444


Q ss_pred             hhcCCCeEEEecCCccc
Q 009133          277 KVLMPHRVYLLRGNHET  293 (542)
Q Consensus       277 K~~~P~~v~lLRGNHE~  293 (542)
                      .     -=....||||.
T Consensus        84 g-----yDa~~lGNHEF   95 (530)
T 4h1s_A           84 R-----YDAMALGNHEF   95 (530)
T ss_dssp             T-----CCEEECCGGGG
T ss_pred             C-----CCEEEEchhhh
Confidence            3     23467899996


No 57 
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=49.06  E-value=21  Score=38.48  Aligned_cols=34  Identities=9%  Similarity=0.148  Sum_probs=23.6

Q ss_pred             CceEEEecCC---CCHHHHHHHHHHhcCCCCCCceEEEeCCcc
Q 009133          221 SEVIVVGDIL---GQFHDLVALFEENAGFPSDHRYFVFNGNYV  260 (542)
Q Consensus       221 ~~i~VIGDIH---G~~~dL~~il~~~~g~p~~~~~~VFLGDyV  260 (542)
                      -++.++||.|   |.+..+.++.+     . .-+.+|++||||
T Consensus       117 ~rfa~~sc~~~~~g~~~~~~~ia~-----~-~~D~vlhlGD~i  153 (527)
T 2yeq_A          117 MTFAFASCQQYEHGYYTAYKHMAK-----E-KLDLVFHLGDYI  153 (527)
T ss_dssp             EEEEEECCCCGGGCCCHHHHHHTT-----S-CCSEEEECSCSS
T ss_pred             eEEEEEecCCCCCCccHHHHHHHh-----c-CCCEEEecCCcc
Confidence            4688999987   55665555443     1 234599999999


No 58 
>1r9d_A Glycerol dehydratase; radical SAM, lyase; 1.80A {Clostridium butyricum} SCOP: c.7.1.1 PDB: 1r8w_A 1r9e_A
Probab=43.38  E-value=15  Score=41.85  Aligned_cols=59  Identities=20%  Similarity=0.176  Sum_probs=46.3

Q ss_pred             HHHHhhhhhhhhhhhhHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh--hhhhhhHHhhhh
Q 009133           63 LWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS--KQRVFDSSLQGL  122 (542)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ki~--k~~~fe~ai~~~  122 (542)
                      +.--+++.|+.-++|--+++.+++=+.-|...|+++++| +..|+++.  ..+.|.+|+|.+
T Consensus       207 A~~i~~eavi~~a~Rya~la~elA~~e~d~~rk~EL~~i-A~~~~~vp~~pa~tf~EAlQ~~  267 (787)
T 1r9d_A          207 SVIISCEAAITYVNRYAKKAKEIADNTSDAKRKAELNEI-AKICSKVSGEGAKSFYEACQLF  267 (787)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH-HHHHHHHTTSCCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHH-HHHhcccccCCCCCHHHHHHHH
Confidence            333456777777888888888888777777778887777 88999988  588999999874


No 59 
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=30.56  E-value=1.1e+02  Score=29.67  Aligned_cols=106  Identities=12%  Similarity=0.169  Sum_probs=63.1

Q ss_pred             cChhHHHHHHhhhhccc-cccccChhhhHHHHHHHHHhccccCCcccccchhh--HHHHHHHhhhhhhhhhhhhHHHHhh
Q 009133            8 GDVDEFKEIMGIINKEM-DLVSLSDENLRRVFMIFEIAGGVVNGRTKQVTEAD--AEQLWCSSVDGVVAVAKQVIDYACE   84 (542)
Q Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   84 (542)
                      |+-.+|.++..|+.--. ..++....+++++-.+.=++ |+.+|+.+-++=+.  .+|=|-|.|        ..+.+.+.
T Consensus        30 ~r~~dFrq~rdi~eall~~~l~~~~~~~k~iri~QfLs-RI~eG~~LD~~Fd~~~~lTPLESAl--------~v~~~I~~  100 (235)
T 3bu8_A           30 SRYGDFRQIRDIMQALLVRPLGKEHTVSRLLRVMQCLS-RIEEGENLDCSFDMEAELTPLESAI--------NVLEMIKT  100 (235)
T ss_dssp             TCHHHHHHHHHHHHHHTTSCCCCCHHHHHHHHHHHHHH-HHHTTTCTTEECSSSTTCCHHHHHH--------HHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhCcccccccchhHHHHHHHHH-HHHcCCCCCcccCCCCCCChHHHHH--------HHHHHHHH
Confidence            55678888877776555 56666666666654433332 23344433332221  122233322        12334444


Q ss_pred             hhccCCCchhHHHHHHHHHHHhhhhh-hhhhhhHHhhhhhh
Q 009133           85 MNFQDLDGPLKQAVVEILRSACNIVS-KQRVFDSSLQGLLE  124 (542)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~c~ki~-k~~~fe~ai~~~~~  124 (542)
                      +.  +|++..-+++-.++..+...|+ |+..|++|...+..
T Consensus       101 e~--~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr  139 (235)
T 3bu8_A          101 EF--TLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKK  139 (235)
T ss_dssp             HT--TCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             hh--cCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            43  7888887888788888888886 89999999888643


No 60 
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=24.17  E-value=1.2e+02  Score=26.31  Aligned_cols=37  Identities=14%  Similarity=0.089  Sum_probs=23.1

Q ss_pred             hccCCCchhHHHHHHHHHH---Hhhhhh-hhhhhhHHhhhh
Q 009133           86 NFQDLDGPLKQAVVEILRS---ACNIVS-KQRVFDSSLQGL  122 (542)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~---~c~ki~-k~~~fe~ai~~~  122 (542)
                      .+..++.+.|+++++..-.   ++|.++ .+.++=+.++.+
T Consensus        75 ~~~~~~~e~r~~ll~~L~~IA~ADG~i~~~E~~lLr~ia~~  115 (133)
T 2h5n_A           75 LIARMDEERKKYVASYLGVIMASDGDIDDNELALWTLISTL  115 (133)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHSCBTTBCCHHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence            3466777788888776555   677776 355554555443


Done!