Query 009134
Match_columns 542
No_of_seqs 473 out of 2611
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 19:35:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kdj_B Protein phosphatase 2C 100.0 2E-38 6.9E-43 326.5 18.9 218 299-532 9-246 (316)
2 2p8e_A PPM1B beta isoform vari 100.0 8.4E-39 2.9E-43 328.1 15.9 221 297-533 22-263 (307)
3 2i0o_A Ser/Thr phosphatase; be 100.0 3.5E-38 1.2E-42 322.9 19.2 213 297-534 21-263 (304)
4 3qn1_B Protein phosphatase 2C 100.0 3.8E-38 1.3E-42 327.5 16.9 218 300-533 15-276 (337)
5 2iq1_A Protein phosphatase 2C 100.0 1.1E-37 3.7E-42 314.6 19.4 214 299-540 8-237 (274)
6 4da1_A Protein phosphatase 1K, 100.0 1.8E-37 6.1E-42 328.5 20.1 247 268-541 87-352 (389)
7 2i44_A Serine-threonine phosph 100.0 2.9E-37 9.8E-42 318.5 19.2 224 297-534 20-285 (324)
8 3d8k_A PP2C, protein phosphata 100.0 1.6E-37 5.4E-42 327.4 17.0 214 298-532 12-287 (377)
9 1a6q_A Phosphatase 2C; catalyt 100.0 1.1E-37 3.8E-42 329.2 15.2 218 297-533 20-257 (382)
10 2pnq_A [pyruvate dehydrogenase 100.0 2.4E-36 8.3E-41 326.3 18.4 213 312-534 45-366 (467)
11 2irm_A Mitogen-activated prote 100.0 3.6E-37 1.2E-41 322.7 11.2 218 299-534 15-305 (358)
12 2isn_A NYSGXRC-8828Z, phosphat 100.0 2.3E-36 8E-41 317.2 17.4 214 299-533 13-297 (364)
13 2j4o_A Mitogen-activated prote 100.0 1.1E-36 3.9E-41 323.4 10.1 221 298-534 26-317 (401)
14 2pk0_A Serine/threonine protei 100.0 2.7E-31 9.4E-36 263.1 14.3 201 298-533 5-215 (250)
15 1txo_A Putative bacterial enzy 100.0 2.5E-30 8.4E-35 254.2 14.9 193 297-532 3-205 (237)
16 2j82_A TPPHA, protein serine-t 100.0 7.2E-30 2.5E-34 251.2 16.7 198 300-531 2-209 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 5.1E-29 1.8E-33 244.3 13.4 198 298-541 5-210 (234)
18 1mzk_A Kinase associated prote 99.9 4.4E-25 1.5E-29 200.9 13.9 136 174-309 4-139 (139)
19 3rnr_A Stage II sporulation E 99.9 3.3E-26 1.1E-30 222.0 6.5 166 332-532 7-182 (211)
20 4h87_A Kanadaptin; FHA domain 99.9 1.5E-22 5.2E-27 182.0 12.3 112 164-287 6-127 (130)
21 1uht_A Expressed protein; FHA 99.8 3.2E-21 1.1E-25 170.5 11.4 108 171-292 6-114 (118)
22 3gqs_A Adenylate cyclase-like 99.8 4.6E-21 1.6E-25 166.3 11.2 99 175-289 2-102 (106)
23 3va4_A Mediator of DNA damage 99.8 1E-20 3.5E-25 170.5 11.7 114 164-290 12-127 (132)
24 2xt9_B Putative signal transdu 99.8 1.7E-20 5.9E-25 165.0 11.9 97 175-289 9-105 (115)
25 2kb3_A Oxoglutarate dehydrogen 99.8 3.6E-20 1.2E-24 169.1 12.1 96 175-288 44-139 (143)
26 3po8_A RV0020C protein, putati 99.8 4.2E-20 1.4E-24 158.5 10.1 94 175-288 3-96 (100)
27 1r21_A Antigen KI-67; beta san 99.8 4.2E-20 1.4E-24 165.6 9.8 104 171-291 6-110 (128)
28 2kfu_A RV1827 PThr 22; FHA dom 99.8 1E-19 3.5E-24 169.2 12.1 96 175-288 53-148 (162)
29 2jpe_A Nuclear inhibitor of pr 99.8 3E-20 1E-24 169.1 7.4 100 176-287 33-133 (140)
30 3hx1_A SLR1951 protein; P74513 99.8 2.6E-19 8.8E-24 161.2 10.5 102 176-293 9-118 (131)
31 3els_A PRE-mRNA leakage protei 99.8 4.2E-19 1.4E-23 164.6 9.9 97 175-283 29-146 (158)
32 3oun_A Putative uncharacterize 99.8 3.7E-19 1.3E-23 164.2 9.1 92 175-286 65-156 (157)
33 1lgp_A Cell cycle checkpoint p 99.7 4.8E-18 1.6E-22 149.5 9.8 92 177-282 4-96 (116)
34 3elv_A PRE-mRNA leakage protei 99.7 7.2E-18 2.5E-22 161.3 11.1 95 177-283 78-193 (205)
35 2jqj_A DNA damage response pro 99.7 1.8E-17 6E-22 152.7 11.9 98 172-287 13-120 (151)
36 1wln_A Afadin; beta sandwich, 99.7 1.2E-17 4.1E-22 148.0 10.2 94 177-287 11-112 (120)
37 1qu5_A Protein kinase SPK1; FH 99.7 3.9E-18 1.3E-22 161.6 7.0 112 164-287 16-145 (182)
38 1dmz_A Protein (protein kinase 99.7 1E-17 3.5E-22 155.5 9.5 101 176-288 4-122 (158)
39 2csw_A Ubiquitin ligase protei 99.7 1.6E-17 5.6E-22 151.9 9.1 91 175-281 15-110 (145)
40 1g3g_A Protien kinase SPK1; FH 99.7 1.7E-17 5.9E-22 154.9 9.3 97 175-282 31-135 (164)
41 2pie_A E3 ubiquitin-protein li 99.7 4.5E-17 1.5E-21 147.8 11.6 89 177-281 9-102 (138)
42 1gxc_A CHK2, CDS1, serine/thre 99.7 1E-16 3.4E-21 147.4 10.9 92 176-283 29-132 (149)
43 1g6g_A Protein kinase RAD53; b 99.7 4.3E-16 1.5E-20 139.3 11.0 96 177-283 5-108 (127)
44 2ff4_A Probable regulatory pro 99.6 9.1E-16 3.1E-20 161.9 10.3 91 181-289 291-381 (388)
45 4ejq_A Kinesin-like protein KI 99.5 1.1E-14 3.6E-19 134.6 9.0 94 178-286 39-141 (154)
46 4a0e_A YSCD, type III secretio 99.5 1.8E-14 6.1E-19 126.6 8.7 97 176-291 3-100 (123)
47 3fm8_A Kinesin-like protein KI 99.5 2E-14 6.7E-19 127.8 8.9 90 177-285 26-119 (124)
48 3t91_A Stage II sporulation pr 99.5 1.9E-13 6.3E-18 134.3 14.0 169 298-532 7-183 (242)
49 3huf_A DNA repair and telomere 99.4 1.4E-13 4.7E-18 138.6 9.1 96 177-286 1-109 (325)
50 3pu9_A Protein serine/threonin 99.4 3.9E-12 1.3E-16 125.5 16.9 169 296-530 8-186 (242)
51 3f79_A Probable two-component 99.2 9.3E-11 3.2E-15 116.0 14.5 165 318-533 50-222 (255)
52 3uv0_A Mutator 2, isoform B; F 99.2 9.7E-12 3.3E-16 104.5 5.1 69 203-286 22-97 (102)
53 3kt9_A Aprataxin; FHA domain, 99.1 4.9E-10 1.7E-14 95.7 10.6 83 189-286 14-96 (102)
54 3i6u_A CDS1, serine/threonine- 99.1 1.7E-10 5.9E-15 122.1 8.7 95 176-286 9-115 (419)
55 2brf_A Bifunctional polynucleo 99.0 1.8E-09 6.2E-14 93.2 8.7 92 177-286 9-104 (110)
56 3zt9_A Serine phosphatase; hyd 99.0 7.2E-09 2.5E-13 98.5 13.8 149 316-529 16-164 (193)
57 4egx_A Kinesin-like protein KI 98.8 9.5E-09 3.2E-13 97.3 8.9 91 178-284 69-168 (184)
58 1wv3_A Similar to DNA segregat 98.8 3.3E-09 1.1E-13 104.5 5.6 72 203-288 93-168 (238)
59 1ujx_A Polynucleotide kinase 3 98.8 1.3E-08 4.4E-13 88.9 8.5 94 175-286 14-111 (119)
60 1yj5_C 5' polynucleotide kinas 98.7 2.7E-08 9.2E-13 89.0 9.2 92 177-286 9-104 (143)
61 3ke6_A Protein RV1364C/MT1410; 98.1 0.0001 3.5E-09 77.6 17.8 152 320-532 53-211 (399)
62 3eq2_A Probable two-component 96.9 0.019 6.5E-07 59.5 15.9 142 333-523 201-344 (394)
63 1wv3_A Similar to DNA segregat 38.9 43 0.0015 32.0 5.9 33 203-239 22-54 (238)
64 1p9k_A ORF, hypothetical prote 28.2 27 0.00092 27.2 2.0 31 247-286 47-77 (79)
65 2l6w_A Beta-type platelet-deri 32.6 14 0.00047 25.4 0.0 20 10-29 17-36 (39)
66 2l8s_A Integrin alpha-1; trans 22.4 94 0.0032 22.8 3.8 13 15-27 21-33 (54)
67 2k1k_A Ephrin type-A receptor 21.8 81 0.0028 21.4 3.2 12 17-28 25-36 (38)
68 3ega_A Pellino-2, protein pell 20.9 1.6E+02 0.0054 28.4 6.1 29 203-231 89-134 (263)
No 1
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=2e-38 Score=326.50 Aligned_cols=218 Identities=25% Similarity=0.364 Sum_probs=178.3
Q ss_pred cceeeccchhhHhcCCccCCCccccccccCCCC-------------CCCceEEEEecCCCcchhhhHHHHHHHHHHHHHH
Q 009134 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-------------VDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL 365 (542)
Q Consensus 299 ~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~-------------~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l 365 (542)
..+|++++ +|+|.+|||++++...+.+ ..+..+|||||||||+.+|++|++.+++.|.+.+
T Consensus 9 ~~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~ 82 (316)
T 3kdj_B 9 PLYGFTSI------CGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEI 82 (316)
T ss_dssp -CEEEEEE------CTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEe------EeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHH
Confidence 35678877 7999999999998644322 2367899999999999999999999999998876
Q ss_pred hhhhHH--hhhcccccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEc
Q 009134 366 SDSLKR--ERLLSQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKM 440 (542)
Q Consensus 366 ~~~~~~--e~~~~~~~~~~~L~~af~~~d~~i~~~---~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qL 440 (542)
...... ........+.++|.++|.+++..+... .+|||++++++..+. +|+|||||||+|++|+|++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~~-----l~vanvGDSR~yl~r~g~~~~l 157 (316)
T 3kdj_B 83 AKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSH-----IFVANCGDSRAVLCRGKTALPL 157 (316)
T ss_dssp HHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSSE-----EEEEEESSCEEEEEETTEEEES
T ss_pred HhhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECCE-----EEEEEccCCEEEEEECCEeccc
Confidence 543210 000112347889999999999988654 678888888885432 7899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCCccc-CcccccC-cccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCC
Q 009134 441 SEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFW 518 (542)
Q Consensus 441 T~DH~~~~~~E~~RI~~~Gg~i~~-~~~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLw 518 (542)
|+||++.++.|+.||...||.+.. ...|++| +++||+|||..+|.. ++++|++... . ....+|||||||||||
T Consensus 158 T~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~---~~~~pdv~~~-~-~~~~~d~llL~SDGl~ 232 (316)
T 3kdj_B 158 SVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS---IIPDPEVTAV-K-RVKEDDCLILASDGVW 232 (316)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCEEEEE-E-CCTTEEEEEEECHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCC---cCCCCceEEE-E-ecCCCCEEEEEccCcc
Confidence 999999999999999999998853 3358899 999999999998865 8999999832 2 2457899999999999
Q ss_pred CCCCHHHHHHHHHh
Q 009134 519 DVISVKKAIQLVVQ 532 (542)
Q Consensus 519 D~ls~~ei~~iv~~ 532 (542)
|+|+++|+++++++
T Consensus 233 d~l~~~ei~~~~~~ 246 (316)
T 3kdj_B 233 DVMTDEEACEMARK 246 (316)
T ss_dssp TSSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999999987
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=328.06 Aligned_cols=221 Identities=28% Similarity=0.384 Sum_probs=175.6
Q ss_pred cccceeeccchhhHhcCCccCCCccccccccCCCC-CCCceEEEEecCCCcchhhhHHHHHHHHHHHH--HHhhhhH--H
Q 009134 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLK--R 371 (542)
Q Consensus 297 ~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~-~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~--~l~~~~~--~ 371 (542)
..+.+|.+++ .|+|..|||++++...+.+ .++..+|+|||||||+.+|++|++.+++.|.+ .+..... .
T Consensus 22 ~~~~~~~~s~------~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~ 95 (307)
T 2p8e_A 22 NGLRYGLSSM------QGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS 95 (307)
T ss_dssp TTEEEEEEEE------EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred CCeeEEEEec------CCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence 4567778877 5889999999988644322 23578999999999999999999999988864 1211100 0
Q ss_pred hhhcccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCC
Q 009134 372 ERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSED 443 (542)
Q Consensus 372 e~~~~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~D 443 (542)
....+...+.++|+++|.++|+.+.+. .+|||++++++..+ . +|+|||||||+|++++|++++||+|
T Consensus 96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~--~---l~vanvGDSRa~l~r~g~~~~lT~D 170 (307)
T 2p8e_A 96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPK--H---IYFINCGDSRAVLYRNGQVCFSTQD 170 (307)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSS--E---EEEEEESSCEEEEEETTEEEEECCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECC--c---EEEEEccCcEEEEEECCccccCCCC
Confidence 000123457889999999999988653 46888888877432 2 7899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCcccCcccccC-cccccccCcccccccC------CCcCccceeeeeEeeecCCC-cEEEEEcC
Q 009134 444 HRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASK-AFALLASD 515 (542)
Q Consensus 444 H~~~~~~E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~------~~v~~~P~I~~~~~~~~~~~-d~lVLaSD 515 (542)
|++.++.|+.||...|+.+... |++| +++||||||..+|..+ +.|+++|++. .+....+ +|||||||
T Consensus 171 H~~~~~~E~~rI~~~gg~v~~~--rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~---~~~l~~~d~~llL~SD 245 (307)
T 2p8e_A 171 HKPCNPREKERIQNAGGSVMIQ--RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVY---EILRAEEDEFIILACD 245 (307)
T ss_dssp CCTTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEE---EEECCTTEEEEEEECH
T ss_pred CCCCCHHHHHHHHHcCCEEEeC--cccCeEeccccccCHHHhcCcccCCCCCeEeccCeEE---EEEcCCCCeEEEEECC
Confidence 9999999999999999988764 8999 8999999999998642 4578999997 3444455 48999999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 009134 516 GFWDVISVKKAIQLVVQL 533 (542)
Q Consensus 516 GLwD~ls~~ei~~iv~~~ 533 (542)
||||+++++|+++++.+.
T Consensus 246 Gl~d~ls~~ei~~~v~~~ 263 (307)
T 2p8e_A 246 GIWDVMSNEELCEYVKSR 263 (307)
T ss_dssp HHHTTSCHHHHHHHHHHH
T ss_pred CcccCCCHHHHHHHHHHH
Confidence 999999999999999874
No 3
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3.5e-38 Score=322.93 Aligned_cols=213 Identities=30% Similarity=0.481 Sum_probs=174.7
Q ss_pred cccceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcc
Q 009134 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLS 376 (542)
Q Consensus 297 ~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~ 376 (542)
..+.+|++++ +|+|..|||++++...+ .++..+|+|||||||+.+|++|++.+++.|.+... +.
T Consensus 21 ~~~~~~~~s~------~G~R~~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~--------~~ 84 (304)
T 2i0o_A 21 EFLASGSSSM------QGWRISQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEA--------YG 84 (304)
T ss_dssp SSEEEEEEEE------EESSSCCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHH--------HH
T ss_pred CceEEEEeec------CCCCCCccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhh--------cc
Confidence 3677888887 58899999999875432 24678999999999999999999999988865421 11
Q ss_pred cccHHHHHHHHHHHHHHHhhh----------------------ccCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeC
Q 009134 377 QCDASDVLRDAFFQTEASMNH----------------------HYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVD 434 (542)
Q Consensus 377 ~~~~~~~L~~af~~~d~~i~~----------------------~~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~ 434 (542)
..++.++|+++|.++|+.+.+ ..+|||++++++..+. +|+|||||||+|++++
T Consensus 85 ~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~-----l~vanvGDSRa~l~r~ 159 (304)
T 2i0o_A 85 RKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKD-----LYVANAGDSRCVVCRN 159 (304)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTE-----EEEEEESSCEEEEEET
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCE-----EEEEEccCcEEEEEEC
Confidence 245789999999999987753 1468888888775332 7899999999999999
Q ss_pred CeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccC-cccccccCcccccccC------CCcCccceeeeeEeeecCCC
Q 009134 435 GKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASK 507 (542)
Q Consensus 435 G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~------~~v~~~P~I~~~~~~~~~~~ 507 (542)
|++++||+||++.++.|+.||.+.||.+... .|++| +++||||||..+|..+ +.|+++|++. .+....+
T Consensus 160 g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~-~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~---~~~l~~~ 235 (304)
T 2i0o_A 160 GKALEMSFDHKPEDTVEYQRIEKAGGRVTLD-GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIE---KITVGPE 235 (304)
T ss_dssp TEEEECCCCCCTTSHHHHHHHHHTTCCBCTT-SCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEE---EEECCTT
T ss_pred CEEEEcCCCcCCcCHHHHHHHHhCCCEEEeC-CeEcCceeccccccCHHHccCccCCccCCeEEeeCeEE---EEEcCCC
Confidence 9999999999999999999999999998732 38898 9999999999988642 3578999997 3444455
Q ss_pred c-EEEEEcCCCCCCCCHHHHHHHHHhhh
Q 009134 508 A-FALLASDGFWDVISVKKAIQLVVQLA 534 (542)
Q Consensus 508 d-~lVLaSDGLwD~ls~~ei~~iv~~~~ 534 (542)
| |||||||||||+|+++|+++++.+.+
T Consensus 236 D~fllL~SDGl~d~l~~~ei~~~v~~~~ 263 (304)
T 2i0o_A 236 DEFMVLACDGIWNFMTSEQVVQFVQERI 263 (304)
T ss_dssp EEEEEEECHHHHTTCCHHHHHHHHHHHH
T ss_pred CeEEEEECcCccccCCHHHHHHHHHHHH
Confidence 5 78999999999999999999998753
No 4
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=3.8e-38 Score=327.47 Aligned_cols=218 Identities=25% Similarity=0.335 Sum_probs=176.7
Q ss_pred ceeeccchhhHhcCCccCCCccccccccCCCC------------------CCCceEEEEecCCCcchhhhHHHHHHHHHH
Q 009134 300 GVGVASDPMALRRGAKKLPMEDVCYYHWPLPG------------------VDKFGLFGICDGHGGSAAAKSASEILPKMV 361 (542)
Q Consensus 300 ~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~------------------~~~~~lfgV~DGhGG~~~a~~as~~l~~~l 361 (542)
.+|++++ +|+|..|||++++...+.. ..+..+|||||||||+.+|++|++.++..|
T Consensus 15 ~~G~~s~------~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l 88 (337)
T 3qn1_B 15 LWGTVSI------QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFAL 88 (337)
T ss_dssp CEEEEEE------CTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHH
T ss_pred ceEEEEe------eeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHH
Confidence 3677877 7999999999998644211 125789999999999999999999999999
Q ss_pred HHHHhhhhHHh-----hhcccccHHHHHHHHHHHHHHHhhhc-------------------cCCCceEEEEEEecCCCcE
Q 009134 362 AAILSDSLKRE-----RLLSQCDASDVLRDAFFQTEASMNHH-------------------YEGCTATVLLVWADGNANI 417 (542)
Q Consensus 362 ~~~l~~~~~~e-----~~~~~~~~~~~L~~af~~~d~~i~~~-------------------~~GsTatv~li~~~~~~~l 417 (542)
.+.+....... .......++++|+++|.++|..+... .+|||++++++..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~---- 164 (337)
T 3qn1_B 89 AEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSH---- 164 (337)
T ss_dssp HHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSE----
T ss_pred HHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCE----
Confidence 88766432110 01113457899999999999988643 368888888875332
Q ss_pred EEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCccc-CcccccC-cccccccCcccccccCCCcCccce
Q 009134 418 FAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPY 495 (542)
Q Consensus 418 ~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-~~~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~ 495 (542)
+|+|||||||+|++|+|++++||+||++.++.|+.||.+.||.+.. ...|++| +++||+|||..+|.. ++++|+
T Consensus 165 -l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~---v~~~pd 240 (337)
T 3qn1_B 165 -IVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY---VIPEPE 240 (337)
T ss_dssp -EEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCE
T ss_pred -EEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC---CCCcce
Confidence 7899999999999999999999999999999999999999998863 3368899 999999999999865 899999
Q ss_pred eeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHHHHhh
Q 009134 496 ISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQL 533 (542)
Q Consensus 496 I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~iv~~~ 533 (542)
+.. +.+ ...+||||||||||||+|+++|+++++++.
T Consensus 241 v~~-~~~-~~~~d~llL~SDGl~d~l~~~ei~~~~~~~ 276 (337)
T 3qn1_B 241 VTF-MPR-SREDECLILASDGLWDVMNNQEVCEIARRR 276 (337)
T ss_dssp EEE-EEC-CTTEEEEEEECHHHHTTSCHHHHHHHHHHH
T ss_pred EEE-EEe-CCCCCEEEEEecCcccCCCHHHHHHHHHHH
Confidence 972 222 246889999999999999999999999864
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=314.58 Aligned_cols=214 Identities=28% Similarity=0.374 Sum_probs=175.5
Q ss_pred cceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccc
Q 009134 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (542)
Q Consensus 299 ~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (542)
+.+|++++ .|+|..|||++++.. ..++..+|+|||||||+.+|++|++.+.+.|.+.+.. ..
T Consensus 8 ~~~g~~s~------~G~R~~nED~~~~~~---~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~---------~~ 69 (274)
T 2iq1_A 8 ENVGCASQ------IGKRKENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EK 69 (274)
T ss_dssp GGCEEEEE------CCSSSSCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CC
T ss_pred CeEEEEec------ccCCCCccceEEEee---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc---------cc
Confidence 35777777 588999999998753 1356789999999999999999999999888765432 24
Q ss_pred cHHHHHHHHHHHHHHHhhhc----------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCC
Q 009134 379 DASDVLRDAFFQTEASMNHH----------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (542)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~~----------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~ 448 (542)
++.++|+++|.++++.+.+. .+|||++++++... .+ +|+|||||||+|++++|++++||.||++.+
T Consensus 70 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~-~~---l~~anvGDSR~~l~r~g~~~~lT~DH~~~~ 145 (274)
T 2iq1_A 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDG-IE---LVVASVGDSRAILCRKGKPMKLTIDHTPER 145 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETT-TE---EEEEEESSCEEEEEETTEEEECCCCCCTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECC-CE---EEEEEecCceEEEEeCCEeeECCCCCCCcC
Confidence 57899999999999887532 46888888877522 22 779999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcccCc---ccccC-cccccccCcccccccCCCcCccceeeeeEeeecCC--CcEEEEEcCCCCCCCC
Q 009134 449 YSERLRIQETGEPLKDGE---TRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQAS--KAFALLASDGFWDVIS 522 (542)
Q Consensus 449 ~~E~~RI~~~Gg~i~~~~---~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~--~d~lVLaSDGLwD~ls 522 (542)
+.|+.||++.||.+...+ +|++| +++||||||..+|..+ ++++|++. .+.... ++|||||||||||+++
T Consensus 146 ~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~--v~~~pdi~---~~~l~~g~d~~lll~SDGl~d~l~ 220 (274)
T 2iq1_A 146 KDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--VIAEPETK---RIKLHHADDSFLVLTTDGINFMVN 220 (274)
T ss_dssp HHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTT--CBCCCEEE---EEECCTTTEEEEEEECHHHHTTCC
T ss_pred HHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCC--EEeCCEEE---EEEeCCCCCcEEEEEccCcccCCC
Confidence 999999999999987532 47788 9999999999999764 78999997 334433 4699999999999999
Q ss_pred HHHHHHHHHhhhhhhhhh
Q 009134 523 VKKAIQLVVQLADEREIL 540 (542)
Q Consensus 523 ~~ei~~iv~~~~~~~~~~ 540 (542)
++|+++++.+. .+++.+
T Consensus 221 ~~ei~~~~~~~-~~~~~~ 237 (274)
T 2iq1_A 221 SQEICDFVNQC-HDPNEA 237 (274)
T ss_dssp HHHHHHHHHTS-SSHHHH
T ss_pred HHHHHHHHHHc-CCHHHH
Confidence 99999999865 344443
No 6
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=1.8e-37 Score=328.46 Aligned_cols=247 Identities=26% Similarity=0.345 Sum_probs=180.1
Q ss_pred ceecCCCCEEEe-----ccccceeeeeccccccccccceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEec
Q 009134 268 PMELTSGDIITL-----GTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICD 342 (542)
Q Consensus 268 ~~~L~~GD~I~l-----G~~~~~~~~~s~q~~~~~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~D 342 (542)
...+.+||.|.+ |+..+.+..-.+... ---..+|++++ .|+|..|||++++.. ..++..+|||||
T Consensus 87 ~l~med~d~i~~~~~q~gg~n~~~~~g~p~p~-~~~~~~g~~s~------~G~R~~NED~~~~~~---~~~~~~l~~VaD 156 (389)
T 4da1_A 87 DLDMEDNDIIEAHREQIGGENLYFQAGKPIPK-ISLENVGCASQ------IGKRKENEDRFDFAQ---LTDEVLYFAVYD 156 (389)
T ss_dssp ---------------------------------CCGGGCEEEEE------CTTSSSCCEEEEEEE---CSSSEEEEEEEE
T ss_pred HcCCCCCCEeeeeeccccccccceeEcCcCCc-ccceeEEEecC------CCCCCCCcceeeeee---cCCCEEEEEEEE
Confidence 366888998864 333333322211111 01235677777 688999999998743 245678999999
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHhhhc----------cCCCceEEEEEEec
Q 009134 343 GHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH----------YEGCTATVLLVWAD 412 (542)
Q Consensus 343 GhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~----------~~GsTatv~li~~~ 412 (542)
||||+.+|++|++.+.+.+.+.+.. ...+.++|++||.+++..+... .+|||++++++...
T Consensus 157 G~GG~~~g~~as~~~~~~l~~~~~~---------~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~ 227 (389)
T 4da1_A 157 GHGGPAAADFCHTHMEKCIMDLLPK---------EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDG 227 (389)
T ss_dssp EESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcc---------ccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcC
Confidence 9999999999999999998876543 2457899999999999888642 46888888888633
Q ss_pred CCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccC---cccccC-cccccccCcccccccCC
Q 009134 413 GNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDG---ETRLCG-LNLARMLGDKFLKQQDA 488 (542)
Q Consensus 413 ~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~---~~Rv~G-l~lSRalGD~~~k~~~~ 488 (542)
. . +|+|||||||+|++|+|++++||+||++.++.|++||.+.||.+... ..|++| +++||||||..+|..+
T Consensus 228 ~-~---l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~- 302 (389)
T 4da1_A 228 I-E---LVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG- 302 (389)
T ss_dssp T-E---EEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGT-
T ss_pred C-e---EEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCC-
Confidence 1 2 78999999999999999999999999999999999999999988643 357888 9999999999999875
Q ss_pred CcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHHHHhhhhhhhhhh
Q 009134 489 RFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQLADEREILC 541 (542)
Q Consensus 489 ~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~iv~~~~~~~~~~c 541 (542)
++++|++.. +.+....++|||||||||||+|+++++++++.+. .+.+.+|
T Consensus 303 -v~~~pdi~~-~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~-~~~~~~a 352 (389)
T 4da1_A 303 -VIAEPETKR-IKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC-HDPNEAA 352 (389)
T ss_dssp -CBCCCEEEE-EECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHS-SSHHHHH
T ss_pred -CCCCCceEE-EEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhc-CCHHHHH
Confidence 889999983 3444445789999999999999999999999865 3444433
No 7
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-37 Score=318.46 Aligned_cols=224 Identities=20% Similarity=0.311 Sum_probs=173.9
Q ss_pred cccceeeccchhhHhcCCccCCCccccccccCC-CCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHH--HhhhhHH--
Q 009134 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPL-PGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKR-- 371 (542)
Q Consensus 297 ~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~-~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~--l~~~~~~-- 371 (542)
..+.+|++++ .|+|++|||++++.... .+.++..+|||||||||+.+|++|++.+++.|.+. +......
T Consensus 20 ~~~~~~~~s~------~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~ 93 (324)
T 2i44_A 20 PAFDAAIFTD------IGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLR 93 (324)
T ss_dssp TTEEEEEEEE------CTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred cceEEEEEEC------CCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 3567888887 58899999999886432 23467889999999999999999999999988652 2211000
Q ss_pred h-------hhcccccHHHHHHHHHHHHHHHhhhc-------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeC---
Q 009134 372 E-------RLLSQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVD--- 434 (542)
Q Consensus 372 e-------~~~~~~~~~~~L~~af~~~d~~i~~~-------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~--- 434 (542)
+ .......+.++|++||.++|+.+.+. ..|||+|++++..+ . +|+|||||||+|++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~--~---l~vanvGDSRa~l~r~~~~ 168 (324)
T 2i44_A 94 SDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKG--F---VAVGHLGDSRIAMGVETPN 168 (324)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETT--E---EEEEEESSCEEEEEEEETT
T ss_pred ccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECC--e---EEEEEccCceEEEEeccCC
Confidence 0 00012356889999999999988643 46888888875422 2 7899999999999997
Q ss_pred C-eEEEcCCCCCCCCHHHHHHHHHcCCCccc------CcccccC-cccccccCc----ccccc-------cCCCcCccce
Q 009134 435 G-KQIKMSEDHRIASYSERLRIQETGEPLKD------GETRLCG-LNLARMLGD----KFLKQ-------QDARFSAEPY 495 (542)
Q Consensus 435 G-~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~------~~~Rv~G-l~lSRalGD----~~~k~-------~~~~v~~~P~ 495 (542)
| ++++||+||++.++.|++||.+.||.+.. ...+..| ++++||+|| ..+|+ ..+.|+++|+
T Consensus 169 g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pd 248 (324)
T 2i44_A 169 GLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPD 248 (324)
T ss_dssp EEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCE
T ss_pred CceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCE
Confidence 7 89999999999999999999999998831 2235677 999999999 55542 1245789999
Q ss_pred eeeeEeeecCCCc-EEEEEcCCCCCCCCHHHHHHHHHhhh
Q 009134 496 ISPVVHIDQASKA-FALLASDGFWDVISVKKAIQLVVQLA 534 (542)
Q Consensus 496 I~~~~~~~~~~~d-~lVLaSDGLwD~ls~~ei~~iv~~~~ 534 (542)
|. .+....+| |||||||||||+|+++|+++++.+.+
T Consensus 249 v~---~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~ 285 (324)
T 2i44_A 249 VR---VVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQAR 285 (324)
T ss_dssp EE---EEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHH
T ss_pred EE---EEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHH
Confidence 98 44555676 99999999999999999999998764
No 8
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-37 Score=327.38 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=173.0
Q ss_pred ccceeeccchhhHhcCCccCCCccc-----cccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHh
Q 009134 298 PFGVGVASDPMALRRGAKKLPMEDV-----CYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRE 372 (542)
Q Consensus 298 ~~~vg~~sd~~~~~~~G~R~~nED~-----~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e 372 (542)
.+.+|.+++ .|+|++|||+ +++...+.+.++..+|||||||||+.+|++|++.+++.|.+..
T Consensus 12 ~~~~~~~s~------~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~------- 78 (377)
T 3d8k_A 12 RTVCASATS------RNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR------- 78 (377)
T ss_dssp HHHHHHTTT------CEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS-------
T ss_pred cEEEEEEEc------cCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc-------
Confidence 456667776 6889988654 4554344456778999999999999999999999998875321
Q ss_pred hhcccccHHHHHHHHHHHHHHHhhhc--cCCCceEEEEEEecCC------------------------------------
Q 009134 373 RLLSQCDASDVLRDAFFQTEASMNHH--YEGCTATVLLVWADGN------------------------------------ 414 (542)
Q Consensus 373 ~~~~~~~~~~~L~~af~~~d~~i~~~--~~GsTatv~li~~~~~------------------------------------ 414 (542)
....++|+++|.++|+.+... .+|||++++++....+
T Consensus 79 -----~~~~~al~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~val 153 (377)
T 3d8k_A 79 -----DVNEEEITRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAM 153 (377)
T ss_dssp -----SSSHHHHHHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEE
T ss_pred -----ccHHHHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceee
Confidence 124689999999999999866 6799999888853210
Q ss_pred ----------CcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcc--cCcccccC-cccccccCcc
Q 009134 415 ----------ANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLK--DGETRLCG-LNLARMLGDK 481 (542)
Q Consensus 415 ----------~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~--~~~~Rv~G-l~lSRalGD~ 481 (542)
+.-.+|||||||||+|++++|++++||+||++.++.|+.||.+.||.+. ++.+|++| |++||||||.
T Consensus 154 i~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~ 233 (377)
T 3d8k_A 154 NFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSF 233 (377)
T ss_dssp CGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCG
T ss_pred ecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecCh
Confidence 0013789999999999999999999999999999999999999999886 55568999 9999999999
Q ss_pred ccccc------CCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHHHHh
Q 009134 482 FLKQQ------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQ 532 (542)
Q Consensus 482 ~~k~~------~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~iv~~ 532 (542)
.+|.. .+.|+++|+|. .+....+|+||||||||||+|+++|+++.+..
T Consensus 234 ~~k~~~~~~~~~~~v~~~Pdv~---~~~l~~~D~llL~SDGl~d~ls~~e~v~~v~~ 287 (377)
T 3d8k_A 234 DFKKGGQGKLQQDLVSAVPDVT---TFFAYPGDDIVAGTAGAFAHFRSHAAIAAAIA 287 (377)
T ss_dssp GGSCC---CCSSCSSBCCCEEE---EEEECTTCEEEEECGGGGCSCSSHHHHHHHHT
T ss_pred hhhcccccccccCccccCCcEE---EEEcCCCCEEEEEECCcccCCCcHHHHHHHHH
Confidence 99853 24588999998 34445678999999999999999999986664
No 9
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=1.1e-37 Score=329.19 Aligned_cols=218 Identities=27% Similarity=0.381 Sum_probs=176.4
Q ss_pred cccceeeccchhhHhcCCccCCCccccccccCCCC-CCCceEEEEecCCCcchhhhHHHHHHHHHHHH--HHhhhhHHhh
Q 009134 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLKRER 373 (542)
Q Consensus 297 ~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~-~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~--~l~~~~~~e~ 373 (542)
..+.+|.+++ .|+|..|||++++...+.+ .++..+|+|||||||+.+|++|++.+++.|.. .+.... .
T Consensus 20 ~~l~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~---~ 90 (382)
T 1a6q_A 20 NGLRYGLSSM------QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSA---G 90 (382)
T ss_dssp TTEEEEEEEE------EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSS---S
T ss_pred CceEEEEEec------CCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccC---C
Confidence 3566777777 5889999999988654322 23578999999999999999999999988863 121100 0
Q ss_pred hcccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCC
Q 009134 374 LLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHR 445 (542)
Q Consensus 374 ~~~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~ 445 (542)
..+...+.++|+++|..+|+.+.+. .+|||++++++..+. +|+|||||||+|++|+|++++||+||+
T Consensus 91 ~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~-----l~vanvGDSRayl~r~g~~~~LT~DHs 165 (382)
T 1a6q_A 91 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQH-----TYFINCGDSRGLLCRNRKVHFFTQDHK 165 (382)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSE-----EEEEEESSCEEEEEETTEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCe-----EEEEEcCCCeEEEEECCceEEeCCCCC
Confidence 0123457889999999999988642 468888888775332 789999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCcccCcccccC-cccccccCcccccccC------CCcCccceeeeeEeeecC--CCcEEEEEcCC
Q 009134 446 IASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQA--SKAFALLASDG 516 (542)
Q Consensus 446 ~~~~~E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~------~~v~~~P~I~~~~~~~~~--~~d~lVLaSDG 516 (542)
+.++.|++||...||.+... |++| +++||||||..+|..+ +.|+++|++. .+... .++||||||||
T Consensus 166 ~~~~~E~~RI~~~gg~v~~~--Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~---~~~l~~~~dd~llLaSDG 240 (382)
T 1a6q_A 166 PSNPLEKERIQNAGGSVMIQ--RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVH---DIERSEEDDQFIILACDG 240 (382)
T ss_dssp TTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEE---EEECCTTTEEEEEEECHH
T ss_pred CCCHHHHHHHHhcCcEEecc--cccCceeeeeecCcHhhcccccCCCccCeeeeeeeEE---EEEccCCCCeEEEEeccC
Confidence 99999999999999998864 9999 9999999999998653 4578999997 34433 46799999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 009134 517 FWDVISVKKAIQLVVQL 533 (542)
Q Consensus 517 LwD~ls~~ei~~iv~~~ 533 (542)
|||+|+++|+++++.+.
T Consensus 241 lwd~ls~~ei~~~v~~~ 257 (382)
T 1a6q_A 241 IWDVMGNEELCDFVRSR 257 (382)
T ss_dssp HHTTSCHHHHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHH
Confidence 99999999999999875
No 10
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=2.4e-36 Score=326.30 Aligned_cols=213 Identities=28% Similarity=0.381 Sum_probs=166.6
Q ss_pred cCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHH------hhh---h-------------
Q 009134 312 RGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL------SDS---L------------- 369 (542)
Q Consensus 312 ~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l------~~~---~------------- 369 (542)
.++.|..|||++.+...+ ..+..||||||||||+.+|++|++.++..|...+ ... .
T Consensus 45 ~g~~R~~nED~~~v~~~~--~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~ 122 (467)
T 2pnq_A 45 RLPANAPIEDRRSATTCL--QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWH 122 (467)
T ss_dssp EECCSSSCCEEEEEEEES--SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEEC
T ss_pred ccCCCCCCCCceeeeecc--CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccc
Confidence 378899999999875432 2356899999999999999999999999887543 110 0
Q ss_pred ----------------------HHhh-hc-----ccccHHHHHHHHHHHHHHHhhhc------------------cCCCc
Q 009134 370 ----------------------KRER-LL-----SQCDASDVLRDAFFQTEASMNHH------------------YEGCT 403 (542)
Q Consensus 370 ----------------------~~e~-~~-----~~~~~~~~L~~af~~~d~~i~~~------------------~~GsT 403 (542)
.++. .. ....+.++|++||.++|..+... .+|||
T Consensus 123 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtT 202 (467)
T 2pnq_A 123 KHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGAT 202 (467)
T ss_dssp CCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEEC
T ss_pred ccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcce
Confidence 0000 00 11268899999999999877531 57999
Q ss_pred eEEEEEEecCCCcEEEEEEEeccceEEEEe---CC--eEEEcCCCCCCCCHHHHHHHHHcCCCccc----CcccccC-cc
Q 009134 404 ATVLLVWADGNANIFAQCANVGDSACVMNV---DG--KQIKMSEDHRIASYSERLRIQETGEPLKD----GETRLCG-LN 473 (542)
Q Consensus 404 atv~li~~~~~~~l~l~vANvGDSRa~l~r---~G--~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~----~~~Rv~G-l~ 473 (542)
|+++++..+. +|||||||||||+++ +| ++++||.||++.++.|++||.+.|+.... ...|++| ++
T Consensus 203 a~v~li~~~~-----l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~ 277 (467)
T 2pnq_A 203 ACVAHVDGVD-----LHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLM 277 (467)
T ss_dssp EEEEEEETTE-----EEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBS
T ss_pred EEEEEEECCE-----EEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccc
Confidence 9999986443 789999999999998 47 79999999999999999999999864311 1138999 99
Q ss_pred cccccCccccccc------------------------------CCCcCccceeeeeEeeecCCCc-EEEEEcCCCCCCCC
Q 009134 474 LARMLGDKFLKQQ------------------------------DARFSAEPYISPVVHIDQASKA-FALLASDGFWDVIS 522 (542)
Q Consensus 474 lSRalGD~~~k~~------------------------------~~~v~~~P~I~~~~~~~~~~~d-~lVLaSDGLwD~ls 522 (542)
+||||||..+|.. .++++++|+|. ......+| |||||||||||+|+
T Consensus 278 vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~---~~~l~~~D~fLVLaSDGLwd~ls 354 (467)
T 2pnq_A 278 PFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVT---YHRLRPQDKFLVLATDGLWETMH 354 (467)
T ss_dssp SSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEE---EEECCTTEEEEEEECHHHHTTSC
T ss_pred cchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEE---EEEcCCCCeEEEEEecCccccCC
Confidence 9999999988741 24589999998 33433444 89999999999999
Q ss_pred HHHHHHHHHhhh
Q 009134 523 VKKAIQLVVQLA 534 (542)
Q Consensus 523 ~~ei~~iv~~~~ 534 (542)
++|++++|.+.+
T Consensus 355 ~~eiv~iv~~~~ 366 (467)
T 2pnq_A 355 RQDVVRIVGEYL 366 (467)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 999999999875
No 11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-37 Score=322.66 Aligned_cols=218 Identities=18% Similarity=0.245 Sum_probs=170.4
Q ss_pred cceeeccchhhHhcCCccC---CCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHH-HHhhhhHHhhh
Q 009134 299 FGVGVASDPMALRRGAKKL---PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRERL 374 (542)
Q Consensus 299 ~~vg~~sd~~~~~~~G~R~---~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~-~l~~~~~~e~~ 374 (542)
.++|...+..+ ...|+|. .|||++++.. ..++..||||||||||+.+|++|++.+++.|.+ .+.. .
T Consensus 15 ~~~g~~~~~~~-~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~------~ 84 (358)
T 2irm_A 15 TGVGEAINQIY-KDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNV------C 84 (358)
T ss_dssp EEEEEECCEEE-CSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTT------C
T ss_pred CCCccccccee-ecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhcc------c
Confidence 34455443322 2257766 5999998753 346788999999999999999999999888753 2211 1
Q ss_pred cccccHHHHHHHHHHHHHHHhhh-------------------------------------------ccCCCceEEEEEEe
Q 009134 375 LSQCDASDVLRDAFFQTEASMNH-------------------------------------------HYEGCTATVLLVWA 411 (542)
Q Consensus 375 ~~~~~~~~~L~~af~~~d~~i~~-------------------------------------------~~~GsTatv~li~~ 411 (542)
.....+.++|++||.++|+.+.+ ..+|||++++++..
T Consensus 85 ~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~ 164 (358)
T 2irm_A 85 NTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHR 164 (358)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEEC
Confidence 12345788999999999887743 14788888888864
Q ss_pred cCCCcEEEEEEEeccceEEEEeC---C--eEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccCcccccccCcccccc-
Q 009134 412 DGNANIFAQCANVGDSACVMNVD---G--KQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQ- 485 (542)
Q Consensus 412 ~~~~~l~l~vANvGDSRa~l~r~---G--~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~Gl~lSRalGD~~~k~- 485 (542)
+. +|||||||||+|++++ | ++++||+||++.++.|++||.+.||.+... |++|..+||||||+.+|.
T Consensus 165 ~~-----l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--r~~g~llTRalGd~~~K~~ 237 (358)
T 2irm_A 165 SH-----LYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF--EGVPLYSTRCIGNYLGKAG 237 (358)
T ss_dssp SE-----EEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG--TTCTTCBSBCEECHHHHTT
T ss_pred CE-----EEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc--CcCCEEcccCCcCHHHhcc
Confidence 43 7899999999999998 8 999999999999999999999999999864 888944999999998874
Q ss_pred ----------cCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCC----------HHHHHHHHHhhh
Q 009134 486 ----------QDARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS----------VKKAIQLVVQLA 534 (542)
Q Consensus 486 ----------~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls----------~~ei~~iv~~~~ 534 (542)
..+.++++|+|...+.+.. .++|||||||||||+++ ++|++++|.+.+
T Consensus 238 ~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~-~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~ 305 (358)
T 2irm_A 238 YKDCNFLSSATAEPVIFEPEIVGGIQITP-ACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEF 305 (358)
T ss_dssp GGGSSSSTTCSSCSSBCCCEEEEEEECCT-TEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCEeccCeEEEEEEeCC-CCcEEEEECCCcccCccccccccccccHHHHHHHHHHHH
Confidence 1235899999973134442 34589999999999999 999999998764
No 12
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-36 Score=317.15 Aligned_cols=214 Identities=21% Similarity=0.280 Sum_probs=168.4
Q ss_pred cceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccc
Q 009134 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (542)
Q Consensus 299 ~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (542)
..++.+++ .|+|..|||++++...+.+.++..||||||||||+.+|++|++.+...|.+.. .
T Consensus 13 ~~~~~~s~------~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~------------~ 74 (364)
T 2isn_A 13 TTTVAATM------LGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS------------E 74 (364)
T ss_dssp EEEEEEEE------CTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS------------S
T ss_pred eEEEEEEc------CCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh------------c
Confidence 35566666 68899999999987666666788999999999999999999999988764310 1
Q ss_pred cHHHHHHHHHHHHHHHhhhc-----cCCCceEEEEEEecC----------------------------------------
Q 009134 379 DASDVLRDAFFQTEASMNHH-----YEGCTATVLLVWADG---------------------------------------- 413 (542)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~~-----~~GsTatv~li~~~~---------------------------------------- 413 (542)
...+.|+++|.++|+.+.+. .+|||++++++....
T Consensus 75 ~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 154 (364)
T 2isn_A 75 FTFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELV 154 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----C
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccc
Confidence 12567899999999888543 578999888875300
Q ss_pred ---------------CCcEEEEEEEeccceEEEE-eCCeEEEcCCCCCCCCHHHHHHHHHcCCCccc-CcccccC-cccc
Q 009134 414 ---------------NANIFAQCANVGDSACVMN-VDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLA 475 (542)
Q Consensus 414 ---------------~~~l~l~vANvGDSRa~l~-r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-~~~Rv~G-l~lS 475 (542)
.+...+|+|||||||+|++ ++|++++||+||++.++.|+.||.++||.+.. +.+|++| |++|
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~lt 234 (364)
T 2isn_A 155 GRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALS 234 (364)
T ss_dssp CSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCS
T ss_pred ccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeE
Confidence 0001378999999999999 79999999999999999999999999998864 3468888 8999
Q ss_pred cccCcccccccC------CCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCC--HHHHHHHHHhh
Q 009134 476 RMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS--VKKAIQLVVQL 533 (542)
Q Consensus 476 RalGD~~~k~~~------~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls--~~ei~~iv~~~ 533 (542)
|||||..+|... ..|+++|+|. .+....+||||||||||||+++ ++++.+++.+.
T Consensus 235 RalGd~~~k~~~~l~~~~~~v~~~Pdv~---~~~l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~ 297 (364)
T 2isn_A 235 RAFGDSDFKMNPNLPPEEQKVIAVPDVR---QFYALSSDLLLLACDGVYEPSGMDWAYVRDLTVAE 297 (364)
T ss_dssp BCEECGGGSCCCSSCGGGSSSBCCCEEE---EEEECTTCEEEEECHHHHCSSSCCHHHHHHHHHHH
T ss_pred EEecchhhccccccCcccCceEEEeEEE---EEECCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 999999988532 3578999998 3444467899999999999976 88998877543
No 13
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.1e-36 Score=323.45 Aligned_cols=221 Identities=21% Similarity=0.267 Sum_probs=167.6
Q ss_pred ccceeeccchhhHhcCCc---cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHH-HHhhhhHHhh
Q 009134 298 PFGVGVASDPMALRRGAK---KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRER 373 (542)
Q Consensus 298 ~~~vg~~sd~~~~~~~G~---R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~-~l~~~~~~e~ 373 (542)
.+++|+++.+... ..|+ |..|||++++.. ..++..||||||||||+.+|++|++.++..|.+ .+...
T Consensus 26 ~~~~G~~~~~G~r-~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~----- 96 (401)
T 2j4o_A 26 LSGVGSASNRSYS-ADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAE----- 96 (401)
T ss_dssp TEEEEEECCEEEC-SSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTT-----
T ss_pred cCceeEEeccccc-ccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcc-----
Confidence 5677787764221 1122 236999998742 346788999999999999999999999887742 11110
Q ss_pred hcccccHHHHHHHHHHHHHHHhhh------------------------------------------ccCCCceEEEEEEe
Q 009134 374 LLSQCDASDVLRDAFFQTEASMNH------------------------------------------HYEGCTATVLLVWA 411 (542)
Q Consensus 374 ~~~~~~~~~~L~~af~~~d~~i~~------------------------------------------~~~GsTatv~li~~ 411 (542)
....++.++|+++|..+++.+.+ ..+|||++++++..
T Consensus 97 -~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~ 175 (401)
T 2j4o_A 97 -HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLN 175 (401)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEET
T ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEEC
Confidence 11235778888999888765532 14689998888864
Q ss_pred cCCCcEEEEEEEeccceEEEEeCC----eEEEcCCCCCCCCHHHHHHHHHcCCCccc-CcccccC-cccccccCcccccc
Q 009134 412 DGNANIFAQCANVGDSACVMNVDG----KQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQ 485 (542)
Q Consensus 412 ~~~~~l~l~vANvGDSRa~l~r~G----~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-~~~Rv~G-l~lSRalGD~~~k~ 485 (542)
+. +|||||||||+|++++| ++++||.||++.++.|++||.+.|+.+.. ...|++| +++||||||..+|.
T Consensus 176 ~~-----l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~ 250 (401)
T 2j4o_A 176 NK-----LYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKY 250 (401)
T ss_dssp TE-----EEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHH
T ss_pred CE-----EEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcc
Confidence 33 78999999999999988 99999999999999999999999998631 1136777 99999999998884
Q ss_pred c-----------CCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCC--------CHHHHHHHHHhhh
Q 009134 486 Q-----------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVI--------SVKKAIQLVVQLA 534 (542)
Q Consensus 486 ~-----------~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~l--------s~~ei~~iv~~~~ 534 (542)
. .+.++++|+|...+.+. ..++|||||||||||+| +++||+++|.+.+
T Consensus 251 ~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~-~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l 317 (401)
T 2j4o_A 251 GYTDIDLLSAAKSKPIIAEPEIHGAQPLD-GVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEF 317 (401)
T ss_dssp SGGGSTTTTTCSSCSSBCCCEEEEEEECT-TCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCeeccceEEEeEEeC-CCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHH
Confidence 2 24589999997313343 23459999999999999 8999999998753
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.97 E-value=2.7e-31 Score=263.09 Aligned_cols=201 Identities=16% Similarity=0.172 Sum_probs=152.8
Q ss_pred ccceeeccchhhHhcCCc-cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHH-HHHhhhhHHhhhc
Q 009134 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVA-AILSDSLKRERLL 375 (542)
Q Consensus 298 ~~~vg~~sd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~-~~l~~~~~~e~~~ 375 (542)
.+.++.+++ .|+ |+.|||++++... .++..+|+|||||||+.+|++||+.+.+.+. +++.....
T Consensus 5 ~~~~~~~s~------~G~~r~~neD~~~~~~~---~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----- 70 (250)
T 2pk0_A 5 YMEISLLTD------IGQRRSNNQDFINQFEN---KAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFS----- 70 (250)
T ss_dssp CEEEEEEEE------CCTTCSCCCEEEEEEEC---TTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCC-----
T ss_pred eEEEEEecC------CCCCCCcCCCceEeccC---CCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccC-----
Confidence 356777777 577 9999999988643 2467899999999999999999999999987 43332110
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc-------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCC
Q 009134 376 SQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (542)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~~-------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~ 448 (542)
....+.++|.++|..+++.+... .+|||++++++. ++. ++++|+||||+|++++|++++||.||++.+
T Consensus 71 ~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~anvGDsr~~l~r~g~~~~lt~dh~~~~ 145 (250)
T 2pk0_A 71 ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIV--GDN---IIFAHVGDSRIGIVRQGEYHLLTSDHSLVN 145 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECCCCCBHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEE--CCe---EEEEEeCCCeEEEEcCCcEEEeCCCCCHHH
Confidence 12346788999999999888654 257777777774 222 789999999999999999999999998865
Q ss_pred HHHHHHHHHcCCCcccCcccccC-cccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHH
Q 009134 449 YSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAI 527 (542)
Q Consensus 449 ~~E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~ 527 (542)
+. .+.|.....+....++ +.+||+||+.. ..+|++. .+....+|+||||||||||+++++++.
T Consensus 146 ~~-----~~~g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~ 209 (250)
T 2pk0_A 146 EL-----VKAGQLTEEEAASHPQKNIITQSIGQAN--------PVEPDLG---VHLLEEGDYLVVNSDGLTNMLSNADIA 209 (250)
T ss_dssp HH-----HHTTSSCHHHHHTCCSCCCBSCCBSCSS--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHH
T ss_pred HH-----HHcCCCCHHHHHhCCCcceEEeecCCCC--------CccceEE---EEEcCCCCEEEEECCCCCCCcCHHHHH
Confidence 43 3444333222122334 78999999754 3578886 455567899999999999999999999
Q ss_pred HHHHhh
Q 009134 528 QLVVQL 533 (542)
Q Consensus 528 ~iv~~~ 533 (542)
+++.+.
T Consensus 210 ~~~~~~ 215 (250)
T 2pk0_A 210 TVLTQE 215 (250)
T ss_dssp HHHTSS
T ss_pred HHHhcC
Confidence 999864
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.97 E-value=2.5e-30 Score=254.21 Aligned_cols=193 Identities=22% Similarity=0.275 Sum_probs=146.3
Q ss_pred cccceeeccchhhHhcCCc-cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhc
Q 009134 297 IPFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (542)
Q Consensus 297 ~~~~vg~~sd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~ 375 (542)
+.+.++.+++ .|+ |..|||++++ +..+|+|||||||+.+|++||+.+.+.+.+.+.. .
T Consensus 3 ~~~~~~~~s~------~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~-------~ 61 (237)
T 1txo_A 3 LVLRYAARSD------RGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDD-------E 61 (237)
T ss_dssp CEEEEEEEEE------CCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSS-------C
T ss_pred eEEEEEEecC------CCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhh-------C
Confidence 4566777777 575 9999999976 2469999999999999999999999888754331 1
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCC
Q 009134 376 SQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIA 447 (542)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~ 447 (542)
...++.++|+++|..++..+.+. .+|||++++++. ++. ++++|+||||+|++++|++.+||.||++.
T Consensus 62 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~a~vGDsr~~l~r~g~~~~lt~dh~~~ 136 (237)
T 1txo_A 62 PGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFA--GNR---LGLVHIGDSRGYLLRDGELTQITKDDTFV 136 (237)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECSCCCBHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEE--CCE---EEEEEEccCcEEEEeCCEeEEeCCCCCHH
Confidence 12368899999999999887643 357777777764 222 78999999999999999999999999875
Q ss_pred CHHHHHHHHHcCCCcccCc-ccccCcccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHH
Q 009134 448 SYSERLRIQETGEPLKDGE-TRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKA 526 (542)
Q Consensus 448 ~~~E~~RI~~~Gg~i~~~~-~Rv~Gl~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei 526 (542)
+ ++...|....... .+..+..++|++|+. ..+|++. .+....+|+||||||||||+++++++
T Consensus 137 ~-----~~~~~G~i~~~~~~~~~~~~~~tr~lg~~---------~~~p~~~---~~~l~~~d~lvl~SDGl~d~l~~~~i 199 (237)
T 1txo_A 137 Q-----TLVDEGRITPEEAHSHPQRSLIMRALTGH---------EVEPTLT---MREARAGDRYLLCSDGLSDPVSDETI 199 (237)
T ss_dssp H-----HHHHTTSSCTTGGGGCTTTTCBCCCBSSS---------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHH
T ss_pred H-----HHHHcCCCCHHHHhhCccccceeeccCCC---------CccceEE---EEecCCCCEEEEECCCCCCCCCHHHH
Confidence 3 3444443222111 122336799999952 4678887 45556789999999999999999999
Q ss_pred HHHHHh
Q 009134 527 IQLVVQ 532 (542)
Q Consensus 527 ~~iv~~ 532 (542)
++++.+
T Consensus 200 ~~~~~~ 205 (237)
T 1txo_A 200 LEALQI 205 (237)
T ss_dssp HHHHTS
T ss_pred HHHHhc
Confidence 999964
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.97 E-value=7.2e-30 Score=251.15 Aligned_cols=198 Identities=24% Similarity=0.271 Sum_probs=140.2
Q ss_pred ceeeccchhhHhcCCc-cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccc
Q 009134 300 GVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (542)
Q Consensus 300 ~vg~~sd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (542)
.++.+++ .|+ |+.|||++ +... ..+. +|+|||||||+.+|++||+.+.+.+.+.+...... ...
T Consensus 2 ~~~~~s~------~G~~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----~~~ 66 (240)
T 2j82_A 2 DVAGLTD------CGLIRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED----LQH 66 (240)
T ss_dssp EEEEEEE------CCSSCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred eEEEeCC------CCCCCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc----cch
Confidence 4566666 576 99999999 6432 2334 99999999999999999999999998766543210 023
Q ss_pred cHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHH
Q 009134 379 DASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (542)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~~--------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~ 450 (542)
.+.++|.++|.+++..+.+. .+|||++++++...++. ++++|+||||+|++++|++.+||.||++.++.
T Consensus 67 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~---l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~ 143 (240)
T 2j82_A 67 DPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDR---AWCAHVGDSRIYRWRKDQLQQITSDHTWIAQA 143 (240)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSE---EEEEEESSCEEEEEETTEEEECSCCCBHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCE---EEEEEEccCceEEEeCCEEEEECCCCcHHHHH
Confidence 57889999999999988654 24777777776421332 77999999999999999999999999886542
Q ss_pred HHHHHHHcCCCcccCcccccC-cccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHH
Q 009134 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 529 (542)
Q Consensus 451 E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~i 529 (542)
.+.|+.......+.++ +.+||+||+.. ..+|++. .+....+|+||||||||||+++++++.++
T Consensus 144 -----~~~g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~~~ 207 (240)
T 2j82_A 144 -----VQLGSLTIEQARQHPWRHVLSQCLGRED--------LSQIDIQ---PIDLEPGDRLLLCSDGLTEELTDDVISIY 207 (240)
T ss_dssp ---------------------CCCBSCCBSCTT--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHHHH
T ss_pred -----HHcCCCCHHHHhcCCCcCeEeecCCCCC--------ceeEEEE---EEeeCCCCEEEEECCCCCCCCCHHHHHHH
Confidence 2333332222122334 78999999742 3578887 45566789999999999999999999999
Q ss_pred HH
Q 009134 530 VV 531 (542)
Q Consensus 530 v~ 531 (542)
+.
T Consensus 208 l~ 209 (240)
T 2j82_A 208 LS 209 (240)
T ss_dssp HT
T ss_pred Hc
Confidence 86
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.96 E-value=5.1e-29 Score=244.34 Aligned_cols=198 Identities=22% Similarity=0.279 Sum_probs=144.4
Q ss_pred ccceeeccchhhHhcCCc-cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcc
Q 009134 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLS 376 (542)
Q Consensus 298 ~~~vg~~sd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~ 376 (542)
.+.++.+++ .|+ |..|||++++ +..+|+|||||||+ ++.||+.+.+.+.+.+...
T Consensus 5 ~~~~~~~s~------~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~-------- 60 (234)
T 2jfr_A 5 VLSAATATD------QGPVRENNQDACLA--------DGILYAVADGFGAR--GHHASATALKTLSAGFAAA-------- 60 (234)
T ss_dssp EEEEEEEEE------CCSSCSSCCEEEEE--------ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHS--------
T ss_pred eEEEEEecC------CCCCCCcCCCccee--------CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcC--------
Confidence 456777777 576 9999999965 45699999999999 7777777777776655432
Q ss_pred cccHHHHHHHHHHHHHHHhhhc------cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHH
Q 009134 377 QCDASDVLRDAFFQTEASMNHH------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (542)
Q Consensus 377 ~~~~~~~L~~af~~~d~~i~~~------~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~ 450 (542)
.+ .+.|.++|.++|+.+.+. ..|||++++++..+.+.. ++++|+||||+|++++|++.+||.||++.+
T Consensus 61 -~~-~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~--l~~anvGDsr~~l~r~g~~~~lt~dh~~~~-- 134 (234)
T 2jfr_A 61 -PD-RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGG--PLVVNIGDSPLYRIRDGHMEQLTDDHSVAG-- 134 (234)
T ss_dssp -CS-HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTS--CEEEEESSCCEEEEETTEEEECSCCCBHHH--
T ss_pred -Cc-HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccE--EEEEEEccCceEEEECCEEEEeCCCCCHHH--
Confidence 12 678889999999888654 168888877774332111 459999999999999999999999998754
Q ss_pred HHHHHHHcCCCcccCcccccC-cccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHH
Q 009134 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 529 (542)
Q Consensus 451 E~~RI~~~Gg~i~~~~~Rv~G-l~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~i 529 (542)
++.+.|...........+ +.+||+||+.. ..+|++. .+....+|+||||||||||+++++++.++
T Consensus 135 ---~~~~~g~i~~~~~~~~~~~~~~tralG~~~--------~~~~~~~---~~~l~~gd~lll~SDGl~d~~~~~~i~~~ 200 (234)
T 2jfr_A 135 ---ELVRMGEITRHEARWHPQRHLLTRALGIGP--------HIGPDVF---GIDCGPGDRLLISSDGLFAAADEALIVDA 200 (234)
T ss_dssp ---HHHHTTSSCHHHHTTCTTTTCBSCCBSSSS--------CCCCEEE---ECCCCTTCEEEEECGGGGTTSCHHHHHHH
T ss_pred ---HHHHcCCCCHHHHhcCcccceeeecCcCCC--------CceeEEE---EEecCCCCEEEEECCCCccccCHHHHHHH
Confidence 334444333221112233 78999999742 4578886 45666789999999999999999999999
Q ss_pred HHhhhhhhhhhh
Q 009134 530 VVQLADEREILC 541 (542)
Q Consensus 530 v~~~~~~~~~~c 541 (542)
+ +. ...+.+|
T Consensus 201 ~-~~-~~~~~~a 210 (234)
T 2jfr_A 201 A-TS-PDPQVAV 210 (234)
T ss_dssp H-TC-SSHHHHH
T ss_pred H-cc-CCHHHHH
Confidence 9 43 3444433
No 18
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.92 E-value=4.4e-25 Score=200.94 Aligned_cols=136 Identities=65% Similarity=1.041 Sum_probs=107.6
Q ss_pred CCceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCc
Q 009134 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (542)
Q Consensus 174 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~ 253 (542)
...++.|+++.|+..|..|.|......+..++|||.+.|||+|+|+.|||+||+|.++++.+.|+|+|++|+|||||||+
T Consensus 4 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~ 83 (139)
T 1mzk_A 4 GSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSH 83 (139)
T ss_dssp CSEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTE
T ss_pred CCCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCCCCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCE
Confidence 34578999999999999999987532233699999999999999999999999999998644799999999999999999
Q ss_pred cccCCCCCCCCCCCceecCCCCEEEeccccceeeeeccccccccccceeeccchhh
Q 009134 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMA 309 (542)
Q Consensus 254 ~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s~q~~~~~~~~vg~~sd~~~ 309 (542)
++..|+...+.++.++.|++||+|+||.+.+.|+.+..+++.++|+++|.++|+|+
T Consensus 84 ~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (139)
T 1mzk_A 84 SISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMA 139 (139)
T ss_dssp ESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECCC---------------
T ss_pred ECcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCCccccCCCCcccccccCC
Confidence 99976656666788999999999999999999999999988899999999999763
No 19
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.92 E-value=3.3e-26 Score=222.00 Aligned_cols=166 Identities=18% Similarity=0.194 Sum_probs=113.3
Q ss_pred CCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHhhhc--------cCCCc
Q 009134 332 VDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCT 403 (542)
Q Consensus 332 ~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~--------~~GsT 403 (542)
.++..+|+|||||||+.+|++||+.+.+.+.+.+.... .+. +++..+++.+... .+|||
T Consensus 7 ~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~---------~~~----~~~~~an~~l~~~~~~~~~~~~~GtT 73 (211)
T 3rnr_A 7 GGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGG---------SPL----DAVLAAQAAVHRWASQGGILGRTGAT 73 (211)
T ss_dssp ETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTC---------CHH----HHHHHHHHHHHHHHHHTTCTTSCCEE
T ss_pred CCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccC---------CHH----HHHHHHHHHHHHHHhhccCCCCcchh
Confidence 45678999999999999999999999999987665321 123 4444444444332 35666
Q ss_pred eEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccC--cccccccCcc
Q 009134 404 ATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG--LNLARMLGDK 481 (542)
Q Consensus 404 atv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~G--l~lSRalGD~ 481 (542)
++++++...+++ ++++|+||||+|++|+|++++||.||++.++ +.+.|. .. +... ..+||++|+.
T Consensus 74 ~~~~~i~~~~~~---~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~-----~~~~g~--~~---~~~~~~~~ltralG~~ 140 (211)
T 3rnr_A 74 MAVAAVNLRDGT---LEWASVGDCRVYLFKGGRLSRLSLDHNVSSE-----MVLLGR--GP---VPGPAGEMITSFIGIE 140 (211)
T ss_dssp EEEEEEETTTTE---EEEEEESSCEEEEEETTEEEECCCCCBHHHH-----HHHTTS--CC---CCSHHHHCBSCCBTCS
T ss_pred heeeeeeeCCCE---EEEEEEccCeEEEEeCCEEEEECCCcHHHHH-----HHHcCC--Ch---hhCCCccEEecccCCC
Confidence 666666421333 7799999999999999999999999987543 334444 21 2222 6799999953
Q ss_pred cccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHHHHh
Q 009134 482 FLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQ 532 (542)
Q Consensus 482 ~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~iv~~ 532 (542)
. ..+|++.. ..+....+|+||||||||||+++++++.+++.+
T Consensus 141 ~--------~~~~~~~~-~~~~l~~gd~llL~SDGl~d~~~~~~i~~~l~~ 182 (211)
T 3rnr_A 141 N--------LTEISTSE-APLPLEAGEGVLVVSDGVYRSLHEDRIAMALSR 182 (211)
T ss_dssp S--------CCCCEECS-SCEECCTTCEEEEEEC-----CCTTEEEEEECT
T ss_pred C--------CcceeEec-ceecCCCCCEEEEEcCCCCCCcCHHHHHHHHhc
Confidence 2 23577721 145566789999999999999999887766643
No 20
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=181.98 Aligned_cols=112 Identities=25% Similarity=0.361 Sum_probs=92.9
Q ss_pred CCCCcccccCCC-ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeC---------C
Q 009134 164 PEFLPKAIADQR-SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNP---------N 233 (542)
Q Consensus 164 ~~~~p~~~~~~~-~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~---------~ 233 (542)
..+.+++|+.++ ..+.|+|++|......+.|.... .++|||.+.|||+|+|+.|||+||+|.++. .
T Consensus 6 ppy~~P~wa~~p~~~~~L~v~k~g~~~~~~~L~~~~----~~~IGR~~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~ 81 (130)
T 4h87_A 6 PPYQEPPWGGPATAPYSLETLKGGTILGTRSLKGTS----YCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSN 81 (130)
T ss_dssp CSCCCCTTBCCCCSCCEEEEEETTEEEEEEECTTCS----EEEEESSTTSSEECCCTTSCSSCEEEEEBCCCCCC-----
T ss_pred cCCCCCCCccCCCCCEEEEEEECCeeeeeEEeCCCc----eEEEcCCcCCCEEeCCCCcchhcEEEEEecccCccceecc
Confidence 345666665443 47899999998888889997652 589999999999999999999999997631 2
Q ss_pred cceEEEEeCCCCCccccCCccccCCCCCCCCCCCceecCCCCEEEeccccceee
Q 009134 234 KLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (542)
Q Consensus 234 ~~~~~l~DlgS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~ 287 (542)
...|+|+||+|+|||||||++|.. +.+++|++||+|+||.+++.|+
T Consensus 82 ~~~~~l~Dl~StNGT~vNg~ri~~--------~~~~~L~~GD~I~~G~str~yv 127 (130)
T 4h87_A 82 GPGFYLYDLGSTHGTFLNKTRIPP--------RTYCRVHVGHVVRFGGSTRLFI 127 (130)
T ss_dssp -CCEEEEECSCSSCEEETTEECCT--------TCCEECCTTCEEEETTCSEEEE
T ss_pred CCcceEeeCCCCCceEECCEECCC--------CceeECCCCCEEEECCceEEEE
Confidence 247999999999999999999984 5679999999999999887764
No 21
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.85 E-value=3.2e-21 Score=170.47 Aligned_cols=108 Identities=32% Similarity=0.542 Sum_probs=96.3
Q ss_pred ccCCCceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCC-CCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccc
Q 009134 171 IADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRV-SPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (542)
Q Consensus 171 ~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (542)
..+..+.+.|++++|+..|+.+.|..+. .++|||. +.|||+|+|+.|||+||+|.++++ .|+|+|++|+||||
T Consensus 6 ~~~~~p~l~L~v~~g~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGT~ 79 (118)
T 1uht_A 6 SGMVTPSLRLVFVKGPREGDALDYKPGS----TIRVGRIVRGNEIAIKDAGISTKHLRIESDSG--NWVIQDLGSSNGTL 79 (118)
T ss_dssp CCCCSCEEEEEESSSTTTTCBCCBCTTC----CEEEESSSTTCSEECCSSSSCTTCEEEEECSS--SEEEECCCCSSCCE
T ss_pred CCCCCCeEEEEEEeCCCCCcEEEECCCC----EEEEcCCCCCCCEEeCCCCCchHHeEEEEECC--EEEEEECCCCCCeE
Confidence 3345668999999999999999998642 6999999 799999999999999999999888 89999999999999
Q ss_pred cCCccccCCCCCCCCCCCceecCCCCEEEeccccceeeeeccc
Q 009134 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSE 292 (542)
Q Consensus 250 vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s~q 292 (542)
|||+++.. +.++.|++||+|+||.+.+.++.+...
T Consensus 80 vng~~l~~--------~~~~~L~~gd~i~lG~~~~~~~~~~~~ 114 (118)
T 1uht_A 80 LNSNALDP--------ETSVNLGDGDVIKLGEYTSILVNFVSG 114 (118)
T ss_dssp ESSSBCCT--------TCEEECCTTEEEEETTTEEEEEEEECS
T ss_pred ECCEECCC--------CCeEEcCCCCEEEECCeEEEEEEEecC
Confidence 99999984 567999999999999999998877654
No 22
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.84 E-value=4.6e-21 Score=166.29 Aligned_cols=99 Identities=28% Similarity=0.439 Sum_probs=88.2
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCC-CCceEeCCccccccccEEEEe-CCcceEEEEeCCCCCccccCC
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWN-PNKLKWELVDMGSLNGTLLNS 252 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~-~~di~l~d~~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~vNg 252 (542)
+..+.|+++.|+..|+.|.|..+. .++|||.+ .|||+|+|+.|||+||+|.++ ++ .|+|+|++|+|||||||
T Consensus 2 ~~~~~L~v~~G~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~~--~~~l~Dl~S~nGt~vng 75 (106)
T 3gqs_A 2 PSRFLLKVLAGANIGAEFHLDSGK----TYIVGSDPQVADIVLSDMSISRQHAKIIIGNDN--SVLIEDLGSKNGVIVEG 75 (106)
T ss_dssp -CEEEEEECC-CCTTCEEEECTTC----EEEEESCTTTCSEECCCTTSCSSCEEEEECTTS--CEEEEECSCSSCCEETT
T ss_pred CceEEEEEEeCCCCcEEEEECCCC----EEEEeECCCcCCEEeCCCCcchhhcEEEECCCC--cEEEEECcCCCCeEECC
Confidence 457899999999999999998763 58999999 799999999999999999998 45 79999999999999999
Q ss_pred ccccCCCCCCCCCCCceecCCCCEEEeccccceeeee
Q 009134 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (542)
Q Consensus 253 ~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~ 289 (542)
+++.. ++.|++||+|++|.+.+.|...
T Consensus 76 ~~i~~----------~~~L~~Gd~i~~G~~~~~~~~~ 102 (106)
T 3gqs_A 76 RKIEH----------QSTLSANQVVALGTTLFLLVDY 102 (106)
T ss_dssp EECSS----------EEECCTTCCEEETTEEEEEEEE
T ss_pred EECCC----------CeECCCCCEEEECCEEEEEEcc
Confidence 99984 4799999999999999988643
No 23
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.84 E-value=1e-20 Score=170.46 Aligned_cols=114 Identities=21% Similarity=0.217 Sum_probs=92.5
Q ss_pred CCCCcccccCCCceEEEEEEeCCC-CCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeC
Q 009134 164 PEFLPKAIADQRSCLSLEVVSGPS-RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDM 242 (542)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~G~~-~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl 242 (542)
++..|...+.+ +...|++++|+. .|+.|.|..+ .++|||.+.|||+|+|+.|||+||+|.++..++.|+|+|+
T Consensus 12 ~~~~~~~~~~~-p~g~L~v~~g~~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl 85 (132)
T 3va4_A 12 SGLVPRGSHME-PIGQLRLFSGTHGPERDFPLYLG-----KNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDC 85 (132)
T ss_dssp --------CCC-CSEEEEECCBTTBSCEEEEECSE-----EEEEESSTTSSEECCCTTSCTTCEEEEECSTTSCCEEEEC
T ss_pred ccccCccccCC-CcEEEEEEeCCCCCceEEEECCC-----CEEEccCCCCCEEeCCCCcChhHEEEEEEcCCCEEEEEEC
Confidence 44555555443 456899999999 9999999987 7999999999999999999999999999843348999999
Q ss_pred CCCCccccCCccc-cCCCCCCCCCCCceecCCCCEEEeccccceeeeec
Q 009134 243 GSLNGTLLNSQPI-NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQIT 290 (542)
Q Consensus 243 gS~NGT~vNg~~v-~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s 290 (542)
+|+|||||||+++ -. ++.++.|++||+|+||.+.+.|....
T Consensus 86 ~S~NGT~vNg~~i~l~-------~~~~~~L~~GD~I~lG~~~l~f~~~~ 127 (132)
T 3va4_A 86 GSLNGTQIVKPPRVLP-------PGVSHRLRDQELILFADFPCQYHRLD 127 (132)
T ss_dssp SCSSCEEETTTTEEEC-------TTCCEECCTTCEEEETTEEEEEEECC
T ss_pred CCCCCeEECCEEcccC-------CCCEEECCCCCEEEECCEEEEEEECC
Confidence 9999999999995 21 35679999999999999999997654
No 24
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.83 E-value=1.7e-20 Score=165.05 Aligned_cols=97 Identities=31% Similarity=0.515 Sum_probs=89.3
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
+..+.|+++.|+..|..+.|... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||++
T Consensus 9 ~~~~~L~v~~g~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 81 (115)
T 2xt9_B 9 SGSALLVVKRGPNAGSRFLLDQP-----TTSAGRHPDSDIFLDDVTVSRRHAEFRLEGG--EFQVVDVGSLNGTYVNREP 81 (115)
T ss_dssp CSCEEEEEEESTTTTCEEEECSS-----EEEEESSTTSSEECCSTTSCSSCEEEEEETT--EEEEEECSCSSCEEETTEE
T ss_pred CCcEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEeCCcccChhheEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 45678999999999999999887 7999999999999999999999999999987 9999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceeeee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~ 289 (542)
+.. +.|++||+|+||.+.+.|...
T Consensus 82 i~~-----------~~L~~gd~i~iG~~~l~~~~~ 105 (115)
T 2xt9_B 82 VDS-----------AVLANGDEVQIGKFRLVFLTG 105 (115)
T ss_dssp CSE-----------EEECTTCEEEETTEEEEEEC-
T ss_pred cce-----------EECCCCCEEEECCEEEEEEeC
Confidence 883 899999999999998887543
No 25
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.82 E-value=3.6e-20 Score=169.10 Aligned_cols=96 Identities=35% Similarity=0.541 Sum_probs=89.2
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
+..+.|+++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|++|+|||||||++
T Consensus 44 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~--~~~l~DlgS~NGT~VNg~~ 116 (143)
T 2kb3_A 44 AGSALLVVKRGPNAGARFLLDQP-----TTTAGRHPESDIFLDDVTVSRRHAEFRINEG--EFEVVDVGSLNGTYVNREP 116 (143)
T ss_dssp SSCEEEEEEESTTTTCEEEECSS-----EEEESSCTTCSBCCCCSSCCSSSEEEEEETT--EEEEEESCCSSCCEETTEE
T ss_pred CccEEEEEEeCCCCCeEEEeCCC-----CeeccCCCCCCEEeCCCCcChhhEEEEEECC--EEEEEECCCcCCeEECCEE
Confidence 44788999999999999999877 7999999999999999999999999999888 9999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceeee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~ 288 (542)
+.. +.|++||+|+||.+.+.|..
T Consensus 117 i~~-----------~~L~~GD~I~iG~~~l~f~~ 139 (143)
T 2kb3_A 117 RNA-----------QVMQTGDEIQIGKFRLVFLA 139 (143)
T ss_dssp CSE-----------EECCTTEEEEETTEEEEEEE
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 884 89999999999999888753
No 26
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.81 E-value=4.2e-20 Score=158.48 Aligned_cols=94 Identities=29% Similarity=0.484 Sum_probs=85.1
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
+..+.|.+..|+ |+.+.+..+ .++|||.+.|||+++|+.|||+||+|.++++ .|+|+|++|+|||||||++
T Consensus 3 ~~~~~l~~~~g~--g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 73 (100)
T 3po8_A 3 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 73 (100)
T ss_dssp CEEEEEEECSSS--CCEEECCSE-----EEEEESSTTCSEECCCTTSCSSCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEECCC--CcEEEECCC-----CEEEeCCCCCCEECCCCCcChhhCEEEEeCC--EEEEEECCCCCCEEECCEE
Confidence 456778887775 889999887 7999999999999999999999999999887 8999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceeee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~ 288 (542)
+.. ++|++||+|++|.+.+.|..
T Consensus 74 i~~-----------~~L~~gd~i~iG~~~~~~~~ 96 (100)
T 3po8_A 74 VQE-----------WQLADGDVIRLGHSEIIVRM 96 (100)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEEEE
Confidence 874 89999999999999887743
No 27
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.81 E-value=4.2e-20 Score=165.60 Aligned_cols=104 Identities=21% Similarity=0.208 Sum_probs=90.1
Q ss_pred ccCCCceEEEEEEe-CCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccc
Q 009134 171 IADQRSCLSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (542)
Q Consensus 171 ~~~~~~~~~L~v~~-G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (542)
....+.+..|.++. ++..|..|.|... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+||||
T Consensus 6 ~g~~~~~~~L~v~~~~~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~--~~~l~Dl~S~nGt~ 78 (128)
T 1r21_A 6 PGGMWPTRRLVTIKRSGVDGPHFPLSLS-----TCLFGRGIECDIRIQLPVVSKQHCKIEIHEQ--EAILHNFSSTNPTQ 78 (128)
T ss_dssp ---CCCCEEEEEEEETTEEEEEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEECCCCSSSCCE
T ss_pred CCCCCCceEEEEEeCCCCCceEEEECCC-----CEEECCCCCCCEEECCCCCChhHEEEEEECC--EEEEEECCCCCCEE
Confidence 34445678899987 5788999999876 7999999999999999999999999999887 99999999999999
Q ss_pred cCCccccCCCCCCCCCCCceecCCCCEEEeccccceeeeecc
Q 009134 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (542)
Q Consensus 250 vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s~ 291 (542)
|||+++.. ++.|++||+|+||.+.+.|.....
T Consensus 79 vNg~~i~~----------~~~L~~Gd~i~iG~~~~~~~~~~~ 110 (128)
T 1r21_A 79 VNGSVIDE----------PVRLKHGDVITIIDRSFRYENESL 110 (128)
T ss_dssp ETTEECSS----------CEECCTTEEEECSSCEEEEEEC--
T ss_pred ECCEECCC----------cEEcCCCCEEEECCEEEEEEeCCc
Confidence 99999984 499999999999999988866543
No 28
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.81 E-value=1e-19 Score=169.20 Aligned_cols=96 Identities=33% Similarity=0.543 Sum_probs=88.9
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
...+.|+++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||++
T Consensus 53 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~--~~~l~DlgS~NGT~VNg~~ 125 (162)
T 2kfu_A 53 PGSALLVVKRGPNAGSRFLLDQA-----ITSAGRHPDSDIFLDDVTVSRRHAEFRLENN--EFNVVDVGSLNGTYVNREP 125 (162)
T ss_dssp SSCCEEEEEESTTCSCEEETTSS-----EEEEESCSSSSEESTTTSSSSCSEEEEEETT--EEEEECCCCSSCEEETTBC
T ss_pred CccEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEECCCCcChhhEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 34678999999999999999877 7999999999999999999999999999988 9999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceeee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~ 288 (542)
+.. +.|++||+|+||.+.+.|..
T Consensus 126 i~~-----------~~L~~GD~I~iG~~~l~f~~ 148 (162)
T 2kfu_A 126 VDS-----------AVLANGDEVQIGKFRLVFLT 148 (162)
T ss_dssp CSE-----------EECCSSCEEEETTEEEEEEC
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 884 89999999999999888754
No 29
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.80 E-value=3e-20 Score=169.14 Aligned_cols=100 Identities=20% Similarity=0.310 Sum_probs=89.2
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCC-CceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSP-SDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~-~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
..+.|+++.|+..+..+.|.... .++|||.+. |||+|+|+.|||+||+|.+++..+.|+|+|++|+|||||||++
T Consensus 33 ~~~~L~v~~g~~~g~~~~l~~~~----~~~IGR~~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg~~ 108 (140)
T 2jpe_A 33 PGLHLDVVKGDKLIEKLIIDEKK----YYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIR 108 (140)
T ss_dssp SSCBEEEESSSSEEEEECCSSCS----BCCBSSCTTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESSSCE
T ss_pred cCEEEEEEcCCCcceEEEeCCCC----eEEecCCCccCCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEECCEE
Confidence 46789999999999999998752 489999998 9999999999999999999972238999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~ 287 (542)
+.. +.++.|++||+|+||.+.+.|.
T Consensus 109 l~~--------~~~~~L~~gd~i~~G~~~~~f~ 133 (140)
T 2jpe_A 109 LEP--------HKPQQIPIDSTVSFGASTRAYT 133 (140)
T ss_dssp ECS--------SSCCEECTTCCBBCSSCCCCBC
T ss_pred CCC--------CccEECCCCCEEEECCceEEEE
Confidence 983 5679999999999999988764
No 30
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.79 E-value=2.6e-19 Score=161.15 Aligned_cols=102 Identities=19% Similarity=0.310 Sum_probs=86.4
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCc---ceEEEEeC-----CCCCc
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNK---LKWELVDM-----GSLNG 247 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~Dl-----gS~NG 247 (542)
+...+.++.++..++.|.|... .++|||.+.|||+|+|+.|||+||+|.+.... ..|+|+|+ +|+||
T Consensus 9 ~~~~~lvv~~~~~~~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NG 83 (131)
T 3hx1_A 9 LQEHILIILDDAGRREVLLTET-----FYTIGRSPRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNG 83 (131)
T ss_dssp CCEEEEEEEETTEEEEEEECSS-----EEEEESSTTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSC
T ss_pred CcceEEEEECCCCcEEEEECCC-----CEEECCCCCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCc
Confidence 3445666667777899999887 79999999999999999999999999997321 24999999 89999
Q ss_pred cccCCccccCCCCCCCCCCCceecCCCCEEEeccccceeeeecccc
Q 009134 248 TLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSET 293 (542)
Q Consensus 248 T~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s~q~ 293 (542)
|||||+++.. +.|++||+|+||.+.+.|+.+..+.
T Consensus 84 T~vNg~~i~~-----------~~L~~GD~I~iG~~~~~~~~~~~~d 118 (131)
T 3hx1_A 84 LMINGKKVQE-----------HIIQTGDEIVMGPQVSVRYEYRRRD 118 (131)
T ss_dssp EEETTEEESE-----------EECCTTCEEECSTTCEEEEEEECC-
T ss_pred eEECCEEeEe-----------EECCCCCEEEECCEEEEEEEEecCC
Confidence 9999999984 9999999999999999998776544
No 31
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.2e-19 Score=164.57 Aligned_cols=97 Identities=27% Similarity=0.368 Sum_probs=82.4
Q ss_pred CceEEEEEEeCCC----CCeEEEeccCCCCCccEEEcCCC---------------CCceEeCCccccccccEEEEeCCc-
Q 009134 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNK- 234 (542)
Q Consensus 175 ~~~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~IGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~- 234 (542)
...|.|+|..|.. ....+.|.... .++|||.+ .|||+|+++.|||+||+|.+..+.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~~~----~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~ 104 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 104 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETT
T ss_pred CCceEEEEEeCCccCcccceEEEecCCC----ceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCC
Confidence 4578999998765 56788887664 69999995 499999999999999999998761
Q ss_pred -ceEEEEeCCCCCccccCCccccCCCCCCCCCCCceecCCCCEEEecccc
Q 009134 235 -LKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (542)
Q Consensus 235 -~~~~l~DlgS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~ 283 (542)
..|+|+|+||+|||||||+++.. +.+++|++||+|+||...
T Consensus 105 ~~~~~l~Dl~StNGT~VNg~ri~~--------~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 105 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEEECSCSSCCEETTEECCT--------TCCEECCTTEEEESSSCG
T ss_pred eeEEEEEeCCCCCccEECCEEcCC--------CceEEcCCCCEEEECCCC
Confidence 12999999999999999999984 557999999999999554
No 32
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.77 E-value=3.7e-19 Score=164.19 Aligned_cols=92 Identities=29% Similarity=0.506 Sum_probs=82.4
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
...+.|.+..|+ ++.|.|... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||++
T Consensus 65 g~~l~L~v~~g~--g~~~~L~~~-----~~~IGR~~~~dI~L~d~~VSr~HA~I~~~~~--~~~l~DlgStNGT~VNG~~ 135 (157)
T 3oun_A 65 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 135 (157)
T ss_dssp --CCEEEETTTT--CCEEECCSE-----EEEEESSTTCSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEcCCC--CeEEEECCC-----cEEEEeCCCCCEEeCCCCcChhHEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 345667777775 899999887 7999999999999999999999999999888 8999999999999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEecccccee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~ 286 (542)
+.. .+|++||+|+||.+.+.|
T Consensus 136 i~~-----------~~L~~GD~I~lG~~~l~f 156 (157)
T 3oun_A 136 VQE-----------WQLADGDVIRLGHSEIIV 156 (157)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEE
Confidence 974 899999999999998876
No 33
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.74 E-value=4.8e-18 Score=149.50 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=79.4
Q ss_pred eEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCc-cccccccEEEEeCCcceEEEEeCCCCCccccCCccc
Q 009134 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~v 255 (542)
..+|..+.+...+..+.|... .++|||.+.|||+|+|. .|||+||+|.++...+.|+|+| +|+|||||||+++
T Consensus 4 wg~L~~~~~~~~~~~~~l~~~-----~~~iGR~~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l 77 (116)
T 1lgp_A 4 WGRLLRLGAEEGEPHVLLRKR-----EWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKV 77 (116)
T ss_dssp CEEECCTTCCSSSCCEEECSS-----EEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCC
T ss_pred EEEEEEeCCCCCccEEEECCC-----CEEECCCCCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEc
Confidence 446766766667788999877 79999999999999875 9999999999974234899999 9999999999999
Q ss_pred cCCCCCCCCCCCceecCCCCEEEeccc
Q 009134 256 NHPDSGSRHWGKPMELTSGDIITLGTT 282 (542)
Q Consensus 256 ~~p~~~~~~~~~~~~L~~GD~I~lG~~ 282 (542)
.. +.++.|++||+|+||..
T Consensus 78 ~~--------~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 78 VK--------KQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CC--------SSCCCCCTTCEEEEECC
T ss_pred CC--------CCcEECCCCCEEEEecc
Confidence 84 56799999999999986
No 34
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.73 E-value=7.2e-18 Score=161.26 Aligned_cols=95 Identities=26% Similarity=0.354 Sum_probs=79.9
Q ss_pred eEEEEEEeCCC----CCeEEEeccCCCCCccEEEcCCC---------------CCceEeCCccccccccEEEEeCCc--c
Q 009134 177 CLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNK--L 235 (542)
Q Consensus 177 ~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~IGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~--~ 235 (542)
.|.|.|+.+.. .-..+.|...+ .++|||++ .|||+|+|+.|||+||+|.+.... .
T Consensus 78 ~~~L~v~k~g~k~~~~i~~~~L~~~s----~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~ 153 (205)
T 3elv_A 78 MYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGIL 153 (205)
T ss_dssp CEEEEEEEGGGCTTCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeCCCcccccceEEEecCCC----ceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCce
Confidence 58899997654 45688886543 69999995 399999999999999999987542 2
Q ss_pred eEEEEeCCCCCccccCCccccCCCCCCCCCCCceecCCCCEEEecccc
Q 009134 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (542)
Q Consensus 236 ~~~l~DlgS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~ 283 (542)
.|+|+||+|+|||||||++|.. +.+++|++||+|+||...
T Consensus 154 ~~~l~DLgStNGTfVNG~rI~~--------~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 154 KCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEECSCSSCCEETTEECCB--------TSCEECCTTCEEESSSSG
T ss_pred eEEEEeCCCCCCCeECCEECCC--------CceeECCCCCEEEECCCC
Confidence 4999999999999999999984 456899999999999754
No 35
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.72 E-value=1.8e-17 Score=152.74 Aligned_cols=98 Identities=24% Similarity=0.367 Sum_probs=82.2
Q ss_pred cCCCceEEEEEEeCCCCCeEEEecc-CCCCCccEEEcCCCCCceEeCCccccccccEEEE--------eCCcceEEEEeC
Q 009134 172 ADQRSCLSLEVVSGPSRGIRCSVQS-ANASRLPLTLGRVSPSDVLLKDSEVSGKHALINW--------NPNKLKWELVDM 242 (542)
Q Consensus 172 ~~~~~~~~L~v~~G~~~g~~~~l~~-~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~--------~~~~~~~~l~Dl 242 (542)
.+.+.+..|.++. +..+..+.|.. . .++|||.+.|||+|+|+.|||+||+|.+ .++ .|+|+|+
T Consensus 13 ~~~~~~~~L~~~~-~~~g~~~~l~~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~--~~~l~Dl 84 (151)
T 2jqj_A 13 SEYTCLGHLVNLI-PGKEQKVEITNRN-----VTTIGRSRSCDVILSEPDISTFHAEFHLLQMDVDNFQRN--LINVIDK 84 (151)
T ss_dssp SSCCEEEEEEEEE-TTEEEEEEEECCS-----CEEEESSTTSSEECCCTTCCTTSEEEEEEEEEETTEEEE--EEEEEEC
T ss_pred CCCCceEEEEEec-CCCceEEEEcCCC-----eEEeCCCCCCCEEECCCCCccccCEEEEecccCCcCcCC--EEEEEEC
Confidence 3444577777764 55688999975 4 7999999999999999999999999999 444 8999999
Q ss_pred CCCCccccCCccccCCCCCCCCCCCceecCCCCEEEeccc-cceee
Q 009134 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT-SSIHV 287 (542)
Q Consensus 243 gS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~-~~~~~ 287 (542)
|+|||||||+++.. + ++.|++||+|+||.+ .+.|.
T Consensus 85 -S~NGT~VNg~~i~~--------~-~~~L~~GD~I~lG~~~~~~f~ 120 (151)
T 2jqj_A 85 -SRNGTFINGNRLVK--------K-DYILKNGDRIVFGKSCSFLFK 120 (151)
T ss_dssp -CSSCEEETTEECCS--------S-CEEECSSEEEEETTTEEEEEE
T ss_pred -CCCCeEECCEEcCC--------C-ceECCCCCEEEECCCcEEEEE
Confidence 99999999999984 3 699999999999994 44443
No 36
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.72 E-value=1.2e-17 Score=147.97 Aligned_cols=94 Identities=17% Similarity=0.084 Sum_probs=80.4
Q ss_pred eEEEEEEeC-CCC----CeEEEeccCCCCCccEEEcC--CCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccc
Q 009134 177 CLSLEVVSG-PSR----GIRCSVQSANASRLPLTLGR--VSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (542)
Q Consensus 177 ~~~L~v~~G-~~~----g~~~~l~~~~~~~~~~~IGR--~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (542)
+..|.++.+ +.. +..|.|..+ .++||| .+.|||+|+++.|||+||+|.+.++ .|+|+|++|+||||
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~~-----~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~dl~S~ngt~ 83 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQLS-----VTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG--VVTVTPRSMDAETY 83 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCSE-----EEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS--CEEEEESCSSSCEE
T ss_pred cCEEEEeCCChhhccCccEEEEECCC-----CEEECCCCCCCCcEEECCCCCchhheEEEEcCC--EEEEEECCCCCCEE
Confidence 446777764 322 889999877 789996 4799999999999999999999877 89999999999999
Q ss_pred cCCccccCCCCCCCCCCCceecCCCCEEEecc-ccceee
Q 009134 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT-TSSIHV 287 (542)
Q Consensus 250 vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~-~~~~~~ 287 (542)
|||+++.. ++.|++||+|+||. +.++|.
T Consensus 84 vNg~~i~~----------~~~L~~GD~I~iG~~~~~~f~ 112 (120)
T 1wln_A 84 VDGQRISE----------TTMLQSGMRLQFGTSHVFKFV 112 (120)
T ss_dssp ETSCBCSS----------CEEECTTCEEEETTTEEEEEE
T ss_pred ECCEEcCC----------CEECCCCCEEEECCceEEEEE
Confidence 99999985 48999999999999 555553
No 37
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.72 E-value=3.9e-18 Score=161.60 Aligned_cols=112 Identities=16% Similarity=0.157 Sum_probs=92.3
Q ss_pred CCCCcccccCCCceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCC----------
Q 009134 164 PEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN---------- 233 (542)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~---------- 233 (542)
....+.........+.|....+...+..+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+...
T Consensus 16 ~~~~~~~~~~~g~~l~L~~~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~ 92 (182)
T 1qu5_A 16 ENVKSSKKKGNGRFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESP 92 (182)
T ss_dssp GGSSCSCCSSSSCCEEECCCTTSSSCSCCCBTTCCS---SEEESSSTTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSC
T ss_pred hHceecccCCCccEEEEEeCCCCCcceEEEEcCCCc---eEEECCCCCCCEEECCCCcChHHeEEEEecCcccccccccc
Confidence 444555555566677777777777788888887622 4999999999999999999999999999870
Q ss_pred ---cceEEEEeCCCCCccccCCccccCCCCCCCCCCCceecCCCCEEEe-----ccccceee
Q 009134 234 ---KLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHV 287 (542)
Q Consensus 234 ---~~~~~l~DlgS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~l-----G~~~~~~~ 287 (542)
.+.|+|+|+ |+|||||||+++.. +.++.|++||+|+| |.+.+.|.
T Consensus 93 ~~~~~~~~l~Dl-StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~ 145 (182)
T 1qu5_A 93 AQGLDDIWYCHT-GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFK 145 (182)
T ss_dssp CCSCCEEEECCC-SSSCCEETTEECCS--------SEEEECCTTBCCEEEEEGGGTEEEECC
T ss_pred ccccceEEEEEC-CcCCeEECCEEcCC--------CcceEcCCCCEEEEEEcCCCCEEEEEE
Confidence 038999999 99999999999984 56799999999999 98877664
No 38
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.72 E-value=1e-17 Score=155.45 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=86.7
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCC-------------cceEEEEeC
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELVDM 242 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~-------------~~~~~l~Dl 242 (542)
..+.|....+...++.+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+... .+.|+|+|+
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl 80 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT 80 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCS---CEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC
T ss_pred eEEEEEeCCCCccceEEEEcCCCc---eEEECCCCCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC
Confidence 357788888888888999987622 5999999999999999999999999999760 038999999
Q ss_pred CCCCccccCCccccCCCCCCCCCCCceecCCCCEEEe-----ccccceeee
Q 009134 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHVQ 288 (542)
Q Consensus 243 gS~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~l-----G~~~~~~~~ 288 (542)
|+|||||||+++.. +.+++|++||+|+| |.+.+.|..
T Consensus 81 -StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 81 -GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp -STTCCEETTEECCS--------SEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred -CcCCeEECCEEcCC--------CceEEcCCCCEEEEeecCCCCEEEEEEE
Confidence 99999999999984 56799999999999 998877743
No 39
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=1.6e-17 Score=151.95 Aligned_cols=91 Identities=27% Similarity=0.401 Sum_probs=76.3
Q ss_pred CceEEEEEEeCCCCCeEEEe-ccCCCCCccEEEcCCCCCceEeCCcc----ccccccEEEEeCCcceEEEEeCCCCCccc
Q 009134 175 RSCLSLEVVSGPSRGIRCSV-QSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTL 249 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l-~~~~~~~~~~~IGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (542)
...|.|+ ..|+..+ .+.+ ... .++|||.+.|||+|+|+. |||+||+|.++.+ +.|+|+|++|+||||
T Consensus 15 ~~~w~L~-~~G~~~~-~~~l~~~~-----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~ 86 (145)
T 2csw_A 15 GRSWCLR-RVGMSAG-WLLLEDGC-----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVW 86 (145)
T ss_dssp SEEEEEC-CTTCSCC-BEECCTTC-----CEEEESSTTSSEECCCSSCGGGSCTTCEEEEECTT-SCEEEEBSSCSSCEE
T ss_pred CccEEEE-EeCCCCC-eEEeCCCC-----cEEECCCCCCCEEECCCCcCCCCChhHeEEEEcCC-CeEEEEECCCCCCeE
Confidence 3356666 6777765 4555 443 699999999999999998 9999999999533 279999999999999
Q ss_pred cCCccccCCCCCCCCCCCceecCCCCEEEecc
Q 009134 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (542)
Q Consensus 250 vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~ 281 (542)
|||+++.. ++++.|++||+|+||.
T Consensus 87 vNg~~i~~--------~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 87 LNRARLEP--------LRVYSIHQGDYIQLGV 110 (145)
T ss_dssp ESSCBCCB--------TCCEECCSSCCEEESC
T ss_pred ECCEECCC--------CccEECCCCCEEEECC
Confidence 99999984 6679999999999999
No 40
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.71 E-value=1.7e-17 Score=154.86 Aligned_cols=97 Identities=27% Similarity=0.279 Sum_probs=83.6
Q ss_pred CceEEEEEEeCCCCCeEEEeccC------CCCCccEEEcCCCCCceEeCCc-cccccccEEEEe-CCcceEEEEeCCCCC
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLN 246 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~------~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~N 246 (542)
+..+.|.++.|+..|..+.+... ...+..++|||.+.|||+|+|+ .|||+||+|.++ ++ .|+|+|+ |+|
T Consensus 31 ~~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~di~l~d~~~vSr~Ha~I~~~~~g--~~~l~Dl-S~N 107 (164)
T 1g3g_A 31 NIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STN 107 (164)
T ss_dssp SCCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESSSSSSEECCCCTTTTSSCEEEEECSTT--CEEEEEC-CSS
T ss_pred CccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCCCCCCEEeCCcCCcChhHEEEEECCCC--CEEEEEC-CCC
Confidence 44678999999999999999742 0111258999999999999997 699999999995 55 8999999 999
Q ss_pred ccccCCccccCCCCCCCCCCCceecCCCCEEEeccc
Q 009134 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (542)
Q Consensus 247 GT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~ 282 (542)
||||||+++.. +.++.|.+||+|+||.+
T Consensus 108 GT~vNg~~i~~--------~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 108 GTWLNGQKVEK--------NSNQLLSQGDEITVGVG 135 (164)
T ss_dssp CEEETTEEECT--------TEEEECCTTCEEEESCS
T ss_pred CeEECCEEcCC--------CCceEcCCCCEEEECCC
Confidence 99999999984 56799999999999996
No 41
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.70 E-value=4.5e-17 Score=147.79 Aligned_cols=89 Identities=28% Similarity=0.418 Sum_probs=74.7
Q ss_pred eEEEEEEeCCCCCeEEEec-cCCCCCccEEEcCCCCCceEeCCcc----ccccccEEEEeCCcceEEEEeCCCCCccccC
Q 009134 177 CLSLEVVSGPSRGIRCSVQ-SANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLLN 251 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~-~~~~~~~~~~IGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vN 251 (542)
.|.|. ..|+..+ .+.+. .. .++|||.+.|||+|+|+. |||+||+|.++.+ +.|+|+|++|+||||||
T Consensus 9 ~w~l~-~~G~~~~-~~~l~~~~-----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~vN 80 (138)
T 2pie_A 9 SWCLR-RVGMSAG-WLLLEDGC-----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWLN 80 (138)
T ss_dssp EEEEE-ETTCSSC-BEEECTTC-----CEEEESSSSSSEECCCSSCTTSSCSSCEEEEECTT-SCEEEEECSCSSCEEET
T ss_pred cEEEE-EeCCCCC-EEEecCCC-----eEEECCCCCCCEEeCCCCcCCCCChhHeEEEEcCC-CcEEEEECCCCCCeEEC
Confidence 45444 3576655 56665 44 699999999999999998 9999999999533 27999999999999999
Q ss_pred CccccCCCCCCCCCCCceecCCCCEEEecc
Q 009134 252 SQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (542)
Q Consensus 252 g~~v~~p~~~~~~~~~~~~L~~GD~I~lG~ 281 (542)
|+++.. +.++.|++||+|+||.
T Consensus 81 g~~l~~--------~~~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 81 RARLEP--------LRVYSIHQGDYIQLGV 102 (138)
T ss_dssp TEECCT--------TCCEECCTTCEEEESC
T ss_pred CEEcCC--------CCcEECCCCCEEEECC
Confidence 999984 5679999999999998
No 42
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.68 E-value=1e-16 Score=147.36 Aligned_cols=92 Identities=20% Similarity=0.160 Sum_probs=77.5
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCcc---------ccccccEEEEeCCc---ceEEEEeCC
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE---------VSGKHALINWNPNK---LKWELVDMG 243 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~---------VSr~Ha~I~~~~~~---~~~~l~Dlg 243 (542)
.+.+|..+.+.. ..+.|... .++|||.+.|||+|+++. |||+||+|.+..+. +.|+|+|+
T Consensus 29 ~w~~L~~~~~~~--~~i~L~~~-----~~~IGR~~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~- 100 (149)
T 1gxc_A 29 PWARLWALQDGF--ANLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH- 100 (149)
T ss_dssp CCEEEEECSTTC--CCEEECSS-----EEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-
T ss_pred eeEEEEEcCCCC--ceEEECCC-----CEEecCCCCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-
Confidence 356777776543 34788776 799999999999999985 99999999998752 37999996
Q ss_pred CCCccccCCccccCCCCCCCCCCCceecCCCCEEEecccc
Q 009134 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (542)
Q Consensus 244 S~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~ 283 (542)
|+|||||||+++.. +.++.|++||+|+||...
T Consensus 101 StNGT~VNg~~i~~--------~~~~~L~~GD~I~lG~~~ 132 (149)
T 1gxc_A 101 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSR 132 (149)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTT
T ss_pred CCCCeEECCEECCC--------CCeEECCCCCEEEECCCC
Confidence 99999999999984 677999999999999964
No 43
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.65 E-value=4.3e-16 Score=139.32 Aligned_cols=96 Identities=27% Similarity=0.284 Sum_probs=77.4
Q ss_pred eEEEEEEeCCCCCeEEEeccC------CCCCccEEEcCCCCCceEeCCc-cccccccEEEEe-CCcceEEEEeCCCCCcc
Q 009134 177 CLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLNGT 248 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~------~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT 248 (542)
..+|....|......+....+ ...+..++|||.+.|||+|+|+ .|||+||+|.++ ++ .|+|+|+ |+|||
T Consensus 5 ~~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~~~~di~l~~~~~vSr~Ha~i~~~~~g--~~~l~Dl-S~NGT 81 (127)
T 1g6g_A 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STNGT 81 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECTTS--CEEEEEC-CSSCC
T ss_pred EEEEEECCCCCCceEeeccccceeeeeecCCCCEEECCCCCCCEEeCCCCCCChhHeEEEECCCC--cEEEEEC-CcCCe
Confidence 446666777766666655411 0112268999999999999997 699999999995 55 8999999 99999
Q ss_pred ccCCccccCCCCCCCCCCCceecCCCCEEEecccc
Q 009134 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (542)
Q Consensus 249 ~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~ 283 (542)
||||+++.. +.++.|++||+|+||.+.
T Consensus 82 ~vNg~~l~~--------~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 82 WLNGQKVEK--------NSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp EETTEECCT--------TCCEECCTTCEEEECTTS
T ss_pred EECCEEcCC--------CCeEEcCCCCEEEECCCc
Confidence 999999984 567999999999999975
No 44
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.61 E-value=9.1e-16 Score=161.94 Aligned_cols=91 Identities=23% Similarity=0.314 Sum_probs=80.7
Q ss_pred EEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCccccCCCC
Q 009134 181 EVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDS 260 (542)
Q Consensus 181 ~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~v~~p~~ 260 (542)
.++.+ ..|..|.+... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||+++..
T Consensus 291 ~l~~~-~~g~~~~l~~~-----~~~iGR~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i~~--- 359 (388)
T 2ff4_A 291 YLHDI-ASGRGYPLQAA-----ATRIGRLHDNDIVLDSANVSRHHAVIVDTGT--NYVINDLRSSNGVHVQHERIRS--- 359 (388)
T ss_dssp EEEET-TTCCEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECSS---
T ss_pred EEEEC-CCCcEEEECCC-----CEEEecCCCCeEEECCCccChhHeEEEEECC--EEEEEECCCCCCeEECCEECCC---
Confidence 33443 45789999887 7999999999999999999999999999887 8999999999999999999963
Q ss_pred CCCCCCCceecCCCCEEEeccccceeeee
Q 009134 261 GSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (542)
Q Consensus 261 ~~~~~~~~~~L~~GD~I~lG~~~~~~~~~ 289 (542)
++.|++||+|+||.+.+.|...
T Consensus 360 -------~~~L~~gd~i~~G~~~~~~~~~ 381 (388)
T 2ff4_A 360 -------AVTLNDGDHIRICDHEFTFQIS 381 (388)
T ss_dssp -------EEEECTTCEEEETTEEEEEECS
T ss_pred -------ceECCCCCEEEECCEEEEEEeC
Confidence 4999999999999998888543
No 45
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.54 E-value=1.1e-14 Score=134.55 Aligned_cols=94 Identities=16% Similarity=0.217 Sum_probs=75.9
Q ss_pred EEEEEEeC-CC-CC-eEEEeccCCCCCccEEEcCCC---CCceEeCCccccccccEEEEeCCc--ceEEEEeCCCCCccc
Q 009134 178 LSLEVVSG-PS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTL 249 (542)
Q Consensus 178 ~~L~v~~G-~~-~g-~~~~l~~~~~~~~~~~IGR~~---~~di~l~d~~VSr~Ha~I~~~~~~--~~~~l~DlgS~NGT~ 249 (542)
..|.-+.. |. .+ ..|.|..+ .++|||.+ .|||+|+++.||++||.|.++++. ..|++.|++|+||||
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~~g-----~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~ 113 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTY 113 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECCSE-----EEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEE
T ss_pred ceEEEecCCcccCceEEEEeCCC-----CEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceE
Confidence 35555533 33 23 34678777 79999976 799999999999999999998753 358999999999999
Q ss_pred cCCccccCCCCCCCCCCCceecCCCCEEEecccc-cee
Q 009134 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS-SIH 286 (542)
Q Consensus 250 vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~-~~~ 286 (542)
|||++|.. ++.|++||+|.||.+. |+|
T Consensus 114 VNG~~i~~----------~~~L~~GD~I~~G~~~~Frf 141 (154)
T 4ejq_A 114 VNGKKVTE----------PSILRSGNRIIMGKSHVFRF 141 (154)
T ss_dssp ETTEECCS----------CEECCTTCEEEETTTEEEEE
T ss_pred ECCEEcCC----------ceECCCCCEEEECCcEEEEE
Confidence 99999974 4899999999999875 344
No 46
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.53 E-value=1.8e-14 Score=126.64 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=88.8
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCC-CCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~-~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
..|+|+|++|+..|..++|..+ .++||.++ .|||+|.|+.||++||+|...++ +|+|. +|+||||+||++
T Consensus 3 ~~~klrvlsG~~~G~~l~L~~~-----~~~IGs~~~~~DLvL~D~~Vs~~H~~L~~~~~--g~~L~--~s~ngt~vdG~~ 73 (123)
T 4a0e_A 3 GSWVCRFYQGKHRGVEVELPHG-----RCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEE--GIRLT--DSAEPLLQEGLP 73 (123)
T ss_dssp CCEEEEECSGGGTTCEEEECSE-----EEEEESCTTTCSEECCCTTSCSSCEEEEEETT--EEEEE--EESSCCEETTEE
T ss_pred ceEEEEEecCCCCCcEEEcCCC-----cEEECCCCCCCCEEEeCCCccceeEEEEECCC--eEEEE--eccCCEEECCEE
Confidence 4688999999999999999988 79999999 99999999999999999999999 99998 799999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEeccccceeeeecc
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~~~~s~ 291 (542)
+.. ...|.+|+.|.+|.+.+.|.....
T Consensus 74 v~~----------~~~L~~g~~l~lG~~~l~~~~~~~ 100 (123)
T 4a0e_A 74 VPL----------GTLLRAGSCLEVGFLLWTFVAVGQ 100 (123)
T ss_dssp CCT----------TCBCCTTSCEEETTEEEEEEETTS
T ss_pred ccc----------ccccCCCCEEEEccEEEEEEcCCC
Confidence 874 239999999999999999876543
No 47
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.52 E-value=2e-14 Score=127.79 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=72.7
Q ss_pred eEEEEEEeCC-CC--CeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEe-CCcceEEEEeCCCCCccccCC
Q 009134 177 CLSLEVVSGP-SR--GIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN-PNKLKWELVDMGSLNGTLLNS 252 (542)
Q Consensus 177 ~~~L~v~~G~-~~--g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~vNg 252 (542)
...|..+.+. .. ...|.|.. ..+|||.+.|||+|+++.||++||+|.++ ++ .|+|+|++ +|||||||
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~------~t~IGR~~~~DI~L~~~~Vs~~Ha~I~~~~~g--~~~l~dl~-~ngt~VNG 96 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKE------HTLIGSANSQDIQLCGMGILPEHCIIDITSEG--QVMLTPQK-NTRTFVNG 96 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCS------EEEEESSTTCSEECCSTTCCSSCEEEEECTTS--CEEEEECT-TCCEEETT
T ss_pred ccEEEEeCCCCccCceEEEECCC------CeEECCCCCCCEEECCCCeecceEEEEECCCC--eEEEEECC-CCCEEECC
Confidence 3457777543 22 24566754 37999999999999999999999999985 44 79999996 79999999
Q ss_pred ccccCCCCCCCCCCCceecCCCCEEEeccccce
Q 009134 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSI 285 (542)
Q Consensus 253 ~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~ 285 (542)
++|.. ++.|++||+|.||.+.+.
T Consensus 97 ~~V~~----------~~~L~~GD~I~lG~~~~F 119 (124)
T 3fm8_A 97 SSVSS----------PIQLHHGDRILWGNNHFF 119 (124)
T ss_dssp EECCS----------CEEECTTCEEEETTTEEE
T ss_pred EEcCC----------cEECCCCCEEEECCCeEE
Confidence 99985 499999999999976543
No 48
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.49 E-value=1.9e-13 Score=134.34 Aligned_cols=169 Identities=16% Similarity=0.115 Sum_probs=104.5
Q ss_pred ccceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhccc
Q 009134 298 PFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQ 377 (542)
Q Consensus 298 ~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~ 377 (542)
.+.+|+++-. ...+..+.|.+.+... .++..+++|+||+|+...|.+++..+...+...+...
T Consensus 7 ~i~~~~~~~~-----~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~--------- 69 (242)
T 3t91_A 7 RVSTGAAHAA-----KGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESG--------- 69 (242)
T ss_dssp EEEEEEEEEC-----TTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---------
T ss_pred EEEEEeehhc-----CCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---------
Confidence 3445555432 2345688999887432 3455679999999999999999988888887654421
Q ss_pred ccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHH
Q 009134 378 CDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLR 454 (542)
Q Consensus 378 ~~~~~~L~~af~~~d~~i~~~---~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~R 454 (542)
..+.+ ++..+|..+... ..++|++++++....+. ++++|+||+|+|++++|++.+++.++.+
T Consensus 70 ~~~~~----~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~-------- 134 (242)
T 3t91_A 70 IDEKI----AIKTINSILSLRTTDEIYSTLDLSIIDLQDAS---CKFLKVGSTPSFIKRGDQVMKVQASNLP-------- 134 (242)
T ss_dssp CCHHH----HHHHHHHHHTTC----CCCCEEEEEEETTTCE---EEEEEESCCCEEEEETTEEEECCCC-----------
T ss_pred CCHHH----HHHHHHHHHHhcCCCCeEeEEEEEEEECCCCE---EEEEcCCCCceEEEECCEEEEecCCCce--------
Confidence 12333 344455555433 34566666666433333 6799999999999999999998765422
Q ss_pred HHHcCCCcccCcccccCcccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCC-----HHHHHHH
Q 009134 455 IQETGEPLKDGETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS-----VKKAIQL 529 (542)
Q Consensus 455 I~~~Gg~i~~~~~Rv~Gl~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls-----~~ei~~i 529 (542)
+| +.....+. ...+....+|.|+||||||||.++ ...+.++
T Consensus 135 -----------------------lG----------~~~~~~~~-~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~l 180 (242)
T 3t91_A 135 -----------------------IG----------IINEFDVE-VVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRK 180 (242)
T ss_dssp -----------------------------------CCCTTCEE-EEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHH
T ss_pred -----------------------eE----------ecCCCcce-EEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHH
Confidence 22 11111121 225667789999999999999998 5566666
Q ss_pred HHh
Q 009134 530 VVQ 532 (542)
Q Consensus 530 v~~ 532 (542)
+..
T Consensus 181 l~~ 183 (242)
T 3t91_A 181 MKG 183 (242)
T ss_dssp HHT
T ss_pred HHH
Confidence 653
No 49
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.44 E-value=1.4e-13 Score=138.63 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=77.4
Q ss_pred eEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCc---eEeCCccccccccEEEEeCC---------cceEEEEeCCC
Q 009134 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSD---VLLKDSEVSGKHALINWNPN---------KLKWELVDMGS 244 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~d---i~l~d~~VSr~Ha~I~~~~~---------~~~~~l~DlgS 244 (542)
||.|+...+...|+++.|..+ .++|||...++ |+++|++|||+||+|.+..- ...++|+||||
T Consensus 1 MWiL~~~~d~~~Gkr~~L~pg-----~YlIGR~~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgS 75 (325)
T 3huf_A 1 MWIIEAEGDILKGKSRILFPG-----TYIVGRNVSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDT 75 (325)
T ss_dssp CEEEEESTTTTTTCCEEECSE-----EEEEESSCCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSC
T ss_pred CcEEeccCccCCCeEEEecCC-----eEEECCCCCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCC
Confidence 566776433457999999888 79999997643 69999999999999998631 13699999999
Q ss_pred CCccccCCccccCCCCCCCCCCCceec-CCCCEEEecccccee
Q 009134 245 LNGTLLNSQPINHPDSGSRHWGKPMEL-TSGDIITLGTTSSIH 286 (542)
Q Consensus 245 ~NGT~vNg~~v~~p~~~~~~~~~~~~L-~~GD~I~lG~~~~~~ 286 (542)
+|||||||+++.. ....| .+||.|++|.....|
T Consensus 76 knGTfVNGerI~~---------~~~~L~~dgd~I~fG~~~~~f 109 (325)
T 3huf_A 76 KFGTKVNEKVVGQ---------NGDSYKEKDLKIQLGKCPFTI 109 (325)
T ss_dssp SSCEEETTEECCT---------TCEEECSSEEEEEETTCSSCE
T ss_pred CCCEEECCEECCC---------ceeeecCCCCEEEecCCcceE
Confidence 9999999999973 34555 479999999987755
No 50
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.41 E-value=3.9e-12 Score=125.48 Aligned_cols=169 Identities=14% Similarity=0.080 Sum_probs=106.0
Q ss_pred ccccceeeccchhhHhcCCccCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhc
Q 009134 296 QIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (542)
Q Consensus 296 ~~~~~vg~~sd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~ 375 (542)
++.+.+++++.. ...+..+.|.|.+... .++..+++|+||+|+...|..++..+...+...+....
T Consensus 8 ~~~~~~~~~~~~-----~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~------ 73 (242)
T 3pu9_A 8 PVTIELAVAKTH-----KFGTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV------ 73 (242)
T ss_dssp CEEEEEEEEEEC-----CTTCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred CcEEEEEEEecc-----cCccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC------
Confidence 334555555531 2334567899887521 34456799999999999999999988888776544211
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHH
Q 009134 376 SQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSER 452 (542)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~~---~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~ 452 (542)
.+.+ ++..+|..+... ...+|++++++...... ++++|+||+++|++++|++.+|+.+|.+
T Consensus 74 ---~~~~----~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~------ 137 (242)
T 3pu9_A 74 ---RDGA----AARAAHDFLYAMRDGKVSAALDILSVDLASRS---VLVTRNSEVPMLLGRNGEFEQISESGGR------ 137 (242)
T ss_dssp ---CHHH----HHHHHHHHHHHHTTTCCCEEEEEEEEETTTTE---EEEEEESCCCEEEEETTEEEEECCCCCC------
T ss_pred ---CHHH----HHHHHHHHHHhccCCCcEEEEEEEEEECCCCE---EEEEeCCCCcEEEEECCEEEEeCCCCcc------
Confidence 2233 333444443322 23344444444323322 5689999999999999999999988733
Q ss_pred HHHHHcCCCcccCcccccCcccccccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCC-------HHH
Q 009134 453 LRIQETGEPLKDGETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS-------VKK 525 (542)
Q Consensus 453 ~RI~~~Gg~i~~~~~Rv~Gl~lSRalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls-------~~e 525 (542)
+| +...+.+. ...+....+|.|+||||||++..+ .++
T Consensus 138 -------------------------lG----------~~~~~~~~-~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~ 181 (242)
T 3pu9_A 138 -------------------------IG----------IYRHTRPR-VLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLA 181 (242)
T ss_dssp -------------------------BS----------SCTTCCCE-EEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHH
T ss_pred -------------------------cc----------ccCCCCce-EEEEEeCCCCEEEEECcCcccCCCCccccccHHH
Confidence 23 11111111 125666789999999999998765 366
Q ss_pred HHHHH
Q 009134 526 AIQLV 530 (542)
Q Consensus 526 i~~iv 530 (542)
+..++
T Consensus 182 l~~l~ 186 (242)
T 3pu9_A 182 TGGRV 186 (242)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 64443
No 51
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.22 E-value=9.3e-11 Score=115.98 Aligned_cols=165 Identities=16% Similarity=0.083 Sum_probs=96.7
Q ss_pred CCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHhhh
Q 009134 318 PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNH 397 (542)
Q Consensus 318 ~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~ 397 (542)
..-|.|.+... .++..+++|+||+|+...|.+++..+...+...+..... . .......+..++..+|..+..
T Consensus 50 vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~-~----~~~~~~~p~~~l~~ln~~l~~ 121 (255)
T 3f79_A 50 LSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRR-N----GTLPEFKPSEVLAHINRGLIN 121 (255)
T ss_dssp SCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTT-C----CC----CHHHHHHHHHHHHBT
T ss_pred cCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcc-c----cccccCCHHHHHHHHHHHHHh
Confidence 44677644321 345678999999998888888888877777665443210 0 001122244556666777765
Q ss_pred ccCCCceEEEEEEecCCCcEEEEEEEecc-ceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccCccccc
Q 009134 398 HYEGCTATVLLVWADGNANIFAQCANVGD-SACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLAR 476 (542)
Q Consensus 398 ~~~GsTatv~li~~~~~~~l~l~vANvGD-SRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~Gl~lSR 476 (542)
...|+.+|++++..+..... ++++|+|+ ++.|++++|++.+++.+|.+
T Consensus 122 ~~~~~~~T~~~~~id~~~~~-l~~~~aGh~p~~~l~~~g~~~~l~~~~~~------------------------------ 170 (255)
T 3f79_A 122 TKLGKHVTMLGGVIDLEKNS-LTYSIGGHLPLPVLFVEGQAGYLEGRGLP------------------------------ 170 (255)
T ss_dssp TBSSCCEEEEEEEEETTTTE-EEEEECSCSCCCEEEC--CEEECCC----------------------------------
T ss_pred cCCCCEEEEEEEEEECCCCE-EEEEeCCCCCceEEEeCCeEEEeCCCCce------------------------------
Confidence 54455555555444322222 67999999 56899999999999887743
Q ss_pred ccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHH-------HHHHHHhh
Q 009134 477 MLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKK-------AIQLVVQL 533 (542)
Q Consensus 477 alGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~e-------i~~iv~~~ 533 (542)
+| +.....+. ...+....+|.|+||||||++.++.++ +.+++.+.
T Consensus 171 -lG----------~~~~~~~~-~~~~~l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~ 222 (255)
T 3f79_A 171 -VG----------LFDDATYD-DRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA 222 (255)
T ss_dssp --C----------CSSCCCCC-C---BCCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH
T ss_pred -EE----------EcCCCceE-EEEEEECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc
Confidence 12 11111111 124566689999999999999998777 77777653
No 52
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.20 E-value=9.7e-12 Score=104.46 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=59.5
Q ss_pred cEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCcc-ccCCccccCCCCCCCCCCCceecCCCCE-----
Q 009134 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELTSGDI----- 276 (542)
Q Consensus 203 ~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT-~vNg~~v~~p~~~~~~~~~~~~L~~GD~----- 276 (542)
.+.|||++.++++|+|++||+.||.|....+ +.++.- |+||| ||||+++ . +..|..||.
T Consensus 22 ~~rIGR~~~~~l~LddpsVs~~HAti~~~~~--G~~~l~--S~nGtVFVNGqrv-~----------~~~I~~gDtI~g~v 86 (102)
T 3uv0_A 22 IYRIGRQKGLEISIADESMELAHATACILRR--GVVRLA--ALVGKIFVNDQEE-T----------VVDIGMENAVAGKV 86 (102)
T ss_dssp CEEEESSTTSTEECCCTTSCTTCEEEEEEET--TEEEEE--ESSSCEEETTEEE-S----------EEEECGGGCBTTEE
T ss_pred EEEEcCCCCCcEEECCcccccceEEEEecCC--ceEEEE--eccCcEEECCEEe-e----------eEEccCCcccccEE
Confidence 5999999999999999999999999999776 455533 99995 9999999 4 399999999
Q ss_pred -EEecccccee
Q 009134 277 -ITLGTTSSIH 286 (542)
Q Consensus 277 -I~lG~~~~~~ 286 (542)
+++|..+-.+
T Consensus 87 ~lrFGnvea~l 97 (102)
T 3uv0_A 87 KLRFGNVEARL 97 (102)
T ss_dssp EEEETTEEEEE
T ss_pred EEEecCEEEEE
Confidence 8888877554
No 53
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.09 E-value=4.9e-10 Score=95.68 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=70.3
Q ss_pred CeEEEeccCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCccccCCCCCCCCCCCc
Q 009134 189 GIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKP 268 (542)
Q Consensus 189 g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~v~~p~~~~~~~~~~ 268 (542)
...+.|..+. .++|||++.+.| .|..+||+|++|..+.+++.|.|.++| +|++++||+++.+ ++.
T Consensus 14 ~~~I~L~~g~----~v~iGR~p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~k--------~~~ 78 (102)
T 3kt9_A 14 HQRIRLPHLE----AVVIGRGPETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIGK--------DQE 78 (102)
T ss_dssp TCEEECCBTC----EEEECSSTTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECCB--------TCE
T ss_pred CCcEEcCCCC----cEEeccCCcccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcCC--------CCe
Confidence 3577887763 477899998755 799999999999999766688999997 8999999999985 788
Q ss_pred eecCCCCEEEecccccee
Q 009134 269 MELTSGDIITLGTTSSIH 286 (542)
Q Consensus 269 ~~L~~GD~I~lG~~~~~~ 286 (542)
+.|++||+|.+-...+.|
T Consensus 79 ~~L~~GD~l~Ll~~~~~~ 96 (102)
T 3kt9_A 79 VKLQPGQVLHMVNELYPY 96 (102)
T ss_dssp EEECTTCCEEEETTEEEE
T ss_pred EEeCCCCEEEEccCCceE
Confidence 999999999987766555
No 54
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.07 E-value=1.7e-10 Score=122.14 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=76.3
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCccEEEcCCCCCceEeCCccc---------cccccEEEEeCCc---ceEEEEeCC
Q 009134 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEV---------SGKHALINWNPNK---LKWELVDMG 243 (542)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~V---------Sr~Ha~I~~~~~~---~~~~l~Dlg 243 (542)
...+|.++.+... .+.+..+ .++|||.+.||++++|+.| ||+||+|.+..+. ..|+|+| +
T Consensus 9 ~~g~l~~~~~~~~--~~~l~~~-----~~~iGR~~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~ 80 (419)
T 3i6u_A 9 PWARLWALQDGFA--NLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-H 80 (419)
T ss_dssp CSEEEEECSSSSC--CEEECSS-----EEEEESSTTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-C
T ss_pred CceEeeecCCCCC--ceEecCC-----CEEecCCCccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-C
Confidence 3556766655333 6788777 7999999999999999876 9999999765321 2399999 8
Q ss_pred CCCccccCCccccCCCCCCCCCCCceecCCCCEEEecccccee
Q 009134 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (542)
Q Consensus 244 S~NGT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~ 286 (542)
|+|||||||+.+.+ +...+|.+||.+++|.+....
T Consensus 81 S~nGt~vn~~~~~~--------~~~~~l~~~d~i~~~~~~~~~ 115 (419)
T 3i6u_A 81 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSRNKV 115 (419)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTTCEE
T ss_pred CcCCceECcccccC--------CCcccCCCCCEeeeeccccce
Confidence 99999999999975 566889999999999887543
No 55
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.95 E-value=1.8e-09 Score=93.16 Aligned_cols=92 Identities=22% Similarity=0.252 Sum_probs=72.2
Q ss_pred eEEEEEEeCCCCCeEEEec--cCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 177 CLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
...|+-.+|... .+.|. .+ .++|||++. ..|.|..+||+|++|..+..++.+.|.++| +|++++||++
T Consensus 9 ~c~L~~~~~~~~--~I~Lp~~~g-----~~viGR~p~--t~I~DkrcSR~hv~L~ad~~~~~v~vk~lG-~Np~~vng~~ 78 (110)
T 2brf_A 9 RLWLESPPGEAP--PIFLPSDGQ-----ALVLGRGPL--TQVTDRKCSRTQVELVADPETRTVAVKQLG-VNPSTTGTQE 78 (110)
T ss_dssp EEEEECSTTSSC--CEECCSTTC-----CEEECSBTT--TTBCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEEC-CB
T ss_pred EEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCC--cccccccceeeeEEEEEecCCCEEEEEEcc-cCCcEECCEE
Confidence 344555565433 67774 44 799999994 457999999999999998877789999996 7999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEe--cccccee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~l--G~~~~~~ 286 (542)
+.+ ++.+.|++||.|.| |.+.+.+
T Consensus 79 l~k--------~~~~~L~~GD~leLl~g~y~~~v 104 (110)
T 2brf_A 79 LKP--------GLEGSLGVGDTLYLVNGLHPLTL 104 (110)
T ss_dssp CCT--------TCEEEEETTCEEEEETTEEEEEE
T ss_pred cCC--------CCEEEecCCCEEEEccCCeEEEE
Confidence 985 88899999999997 5544443
No 56
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.95 E-value=7.2e-09 Score=98.50 Aligned_cols=149 Identities=17% Similarity=0.148 Sum_probs=94.2
Q ss_pred cCCCccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHh
Q 009134 316 KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASM 395 (542)
Q Consensus 316 R~~nED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i 395 (542)
+..+.|.|.+.. .++..+++|+||+|..-.|..++..+...+... . ...+.++ +..+|..+
T Consensus 16 ~~v~GD~y~~~~----~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~-~----------~~~p~~i----l~~ln~~l 76 (193)
T 3zt9_A 16 EIACGDACLVKR----VEGVIFLAVGDGIGHGPEAARAAEIAIASMESS-M----------NTGLVNI----FQLCHREL 76 (193)
T ss_dssp CSSCSEEEEEEE----ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHH-T----------TSCHHHH----HHHHHHHH
T ss_pred CCCCCCeEEEEE----eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc-c----------cCCHHHH----HHHHHHHH
Confidence 456789988753 245678999999997777777777766665442 0 1123333 33445555
Q ss_pred hhccCCCceEEEEEEecCCCcEEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccCcccc
Q 009134 396 NHHYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLA 475 (542)
Q Consensus 396 ~~~~~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~Gl~lS 475 (542)
.. ..|+|++++.+...... +.++|+|+++.|++++|+...+...+ +.
T Consensus 77 ~~-~~~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~~~~~l~~~~---------------g~-------------- 123 (193)
T 3zt9_A 77 RG-TRGAVAALCRVDRRQGL---WQAAIVGNIHVKILSAKGIITPLATP---------------GI-------------- 123 (193)
T ss_dssp TT-SSCEEEEEEEEETTTTE---EEEEEESSCEEEEEETTEEECCCCBC---------------CB--------------
T ss_pred hc-cCceEEEEEEEECCCCE---EEEEecCCceEEEEcCCcEEEecCCC---------------Cc--------------
Confidence 43 34666666555433333 67899999999999998877654322 11
Q ss_pred cccCcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCHHHHHHH
Q 009134 476 RMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 529 (542)
Q Consensus 476 RalGD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~~ei~~i 529 (542)
+|.. . ..+++. .++....+|.++|+||||++.++.+++..+
T Consensus 124 --lG~~-~-------~~~~~~---~~~~l~~gd~l~l~sDGl~e~~~~~~~~~~ 164 (193)
T 3zt9_A 124 --LGYN-Y-------PHQLLI---AKGSYQEGDLFLIHSDGIQEGAVPLALLAN 164 (193)
T ss_dssp --BTTB-C-------CSSCCC---EEEECCTTCEEEEECTTSCTTCSCGGGGGC
T ss_pred --eecc-C-------Ccccee---EEeccCCCCEEEEECCCCCCccChhhhhch
Confidence 2210 0 001222 255667899999999999999987665543
No 57
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.81 E-value=9.5e-09 Score=97.25 Aligned_cols=91 Identities=18% Similarity=0.254 Sum_probs=71.3
Q ss_pred EEEEEEeC-CC-CC-eEEEeccCCCCCccEEEcCCC---CCceEeCCccccccccEEEEeCCc---ceEEEEeCCCCCcc
Q 009134 178 LSLEVVSG-PS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK---LKWELVDMGSLNGT 248 (542)
Q Consensus 178 ~~L~v~~G-~~-~g-~~~~l~~~~~~~~~~~IGR~~---~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~DlgS~NGT 248 (542)
..|+-+.. |. .+ ..|.|..+ ..+|||.. .+||+|.++.|+++||.|..+.++ +.++|.++ +.+.|
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~~g-----~t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECCSE-----EEEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred ceEEeccCCcccCceEEEEECCC-----cCcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 45555533 32 22 35778877 78999964 689999999999999999987642 34778876 56789
Q ss_pred ccCCccccCCCCCCCCCCCceecCCCCEEEeccccc
Q 009134 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (542)
Q Consensus 249 ~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~ 284 (542)
||||++|.. ++.|++||+|.||.+.+
T Consensus 143 ~VNG~~I~~----------~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 143 YVNGKKVTE----------PSILRSGNRIIMGKSHV 168 (184)
T ss_dssp EETTEECCS----------CEECCTTCEEEETTTEE
T ss_pred EEcCEEccc----------cEEcCCCCEEEECCCCE
Confidence 999999985 49999999999998864
No 58
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.80 E-value=3.3e-09 Score=104.49 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=61.4
Q ss_pred cEEEcCCCCCceEeCCccccccccEEEEeC-C-cceEEEEeCCCCCcc-ccCCccccCCCCCCCCCCCceecC-CCCEEE
Q 009134 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNP-N-KLKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELT-SGDIIT 278 (542)
Q Consensus 203 ~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~-~-~~~~~l~DlgS~NGT-~vNg~~v~~p~~~~~~~~~~~~L~-~GD~I~ 278 (542)
.++|||.+.|||+|++. + ||.+..+. + .+.|+|+|++|+||| ||||+++.. +..|+ .||.|.
T Consensus 93 ~itIG~~~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~----------~~~L~~~GD~I~ 158 (238)
T 1wv3_A 93 TMTIGPNAYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ----------LTNKAYIGDHIY 158 (238)
T ss_dssp EEEEESSTTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS----------SEEEEETTCEEE
T ss_pred eEEEeCCCCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc----------ceeccCCcCEEE
Confidence 69999999999999988 3 68777771 1 027999999999997 999999985 37899 999999
Q ss_pred eccccceeee
Q 009134 279 LGTTSSIHVQ 288 (542)
Q Consensus 279 lG~~~~~~~~ 288 (542)
+|+..+.|..
T Consensus 159 ig~~~~~~~~ 168 (238)
T 1wv3_A 159 VEGIWLEVQA 168 (238)
T ss_dssp ETTEEEEECS
T ss_pred ECCEEEEEEC
Confidence 9999988854
No 59
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.79 E-value=1.3e-08 Score=88.92 Aligned_cols=94 Identities=21% Similarity=0.274 Sum_probs=73.5
Q ss_pred CceEEEEEEeCCCCCeEEEec--cCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCC
Q 009134 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (542)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg 252 (542)
+....|+-+++... .+.|. .+ .++|||.+. ..|.|..+||+|+++.++..++.+.|.++| +|+++|||
T Consensus 14 ~~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGRgp~--t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vng 83 (119)
T 1ujx_A 14 RGRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGPL--TQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGV 83 (119)
T ss_dssp CCCEEEECCSSSCC--CCCCCTTSC-----CEEESBBTT--TTBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSSS
T ss_pred cceEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCC--cccccccccceeEEEEEecCCCEEEEEEcc-cCCcEECC
Confidence 33455666666533 45563 34 799999994 457999999999999998877789999996 69999999
Q ss_pred ccccCCCCCCCCCCCceecCCCCEEEe--cccccee
Q 009134 253 QPINHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (542)
Q Consensus 253 ~~v~~p~~~~~~~~~~~~L~~GD~I~l--G~~~~~~ 286 (542)
+++.+ ++.+.|++||.|.| |.+.+.+
T Consensus 84 ~~l~k--------~~~~~L~~GD~l~Ll~g~y~~~v 111 (119)
T 1ujx_A 84 QELKP--------GLSGSLSLGDVLYLVNGLYPLTL 111 (119)
T ss_dssp SBCCT--------TCEEEEETTCCCBCBTTBSCCEE
T ss_pred EEecC--------CCEEEecCCCEEEEecCCeEEEE
Confidence 99985 78899999999984 4444443
No 60
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.75 E-value=2.7e-08 Score=88.98 Aligned_cols=92 Identities=20% Similarity=0.250 Sum_probs=73.2
Q ss_pred eEEEEEEeCCCCCeEEEec--cCCCCCccEEEcCCCCCceEeCCccccccccEEEEeCCcceEEEEeCCCCCccccCCcc
Q 009134 177 CLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (542)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vNg~~ 254 (542)
...|+-++|... .+.|. .+ .++|||.+ ...|.|..+||+|++|.++..++.+.|.++| +|+++|||.+
T Consensus 9 ~c~L~p~d~~~~--~I~Lp~~~g-----~vvIGRgP--et~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~vng~~ 78 (143)
T 1yj5_C 9 RLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGVHE 78 (143)
T ss_dssp EEEEECCTTSCC--CEECCTTTC-----EEEECSBT--TTTBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEE
T ss_pred eEEEEecCCCCC--cEEeccCCC-----CEEEcCCC--ccccccccccceeEEEEEecCCCeEEEEEcc-cCCcEECCEE
Confidence 445666666533 67774 44 79999999 4568999999999999998877789999996 6999999999
Q ss_pred ccCCCCCCCCCCCceecCCCCEEEe--cccccee
Q 009134 255 INHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (542)
Q Consensus 255 v~~p~~~~~~~~~~~~L~~GD~I~l--G~~~~~~ 286 (542)
+.+ +..+.|++||.|.| |.+.+.+
T Consensus 79 L~k--------~~~~~L~~GD~LeLl~g~y~f~V 104 (143)
T 1yj5_C 79 LKP--------GLSGSLSLGDVLYLVNGLYPLTL 104 (143)
T ss_dssp CCT--------TCEEEECTTCEEESSSSCSEEEE
T ss_pred ecC--------CCEEEecCCCEEEEecCCceEEE
Confidence 985 78899999999985 4444444
No 61
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.07 E-value=0.0001 Score=77.57 Aligned_cols=152 Identities=13% Similarity=0.004 Sum_probs=86.8
Q ss_pred ccccccccCCCCCCCceEEEEecCCCcchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHhhhcc
Q 009134 320 EDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHY 399 (542)
Q Consensus 320 ED~~~v~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~~ 399 (542)
=|.|.+.. .++..+++|+|++|-.-.|.+++..+...+....... .++.++| ..+|..+....
T Consensus 53 GD~y~~~~----~~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~---------~~p~~il----~~ln~~~~~~~ 115 (399)
T 3ke6_A 53 GDWFDALA----LGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAG---------YTVVEAL----EAVDRFHKQVP 115 (399)
T ss_dssp SEEEEEEE----CSSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTT---------CCHHHHH----HHHHHHGGGST
T ss_pred CceEEEEE----ECCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcC---------CCHHHHH----HHHHHHHHhcC
Confidence 57666542 1236788999999944444455555555555443221 1233333 33344333333
Q ss_pred CCCceEEEEEEecCCCcEEEEEEEeccceEEEEe-CCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccCccccccc
Q 009134 400 EGCTATVLLVWADGNANIFAQCANVGDSACVMNV-DGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARML 478 (542)
Q Consensus 400 ~GsTatv~li~~~~~~~l~l~vANvGDSRa~l~r-~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~Gl~lSRal 478 (542)
.+..+|++++..+....- +.++|+|....|+++ +|+...+..++.+ .+
T Consensus 116 ~~~~~t~~~~~id~~~~~-l~~~~aGh~~~~l~~~~g~~~~l~~~~~~------------------------------pl 164 (399)
T 3ke6_A 116 GSKSATMCVGSLDFTSGE-FQYCTAGHPPPLLVTADASARYVEPTGAG------------------------------PL 164 (399)
T ss_dssp TCTTCEEEEEEEETTTCE-EEEEEESSCCCEEECTTSCEEECCCCSCC------------------------------CT
T ss_pred CCcEEEEEEEEEECCCCE-EEEECCCCChhEEEeCCCCEEEeecCCCc------------------------------ce
Confidence 344444444433322222 679999999999998 7778887765421 12
Q ss_pred CcccccccCCCcCccceeeeeEeeecCCCcEEEEEcCCCCCCCCH------HHHHHHHHh
Q 009134 479 GDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV------KKAIQLVVQ 532 (542)
Q Consensus 479 GD~~~k~~~~~v~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~------~ei~~iv~~ 532 (542)
| +. +.+. ...+....+|.|+|+||||+|.... +.+.+++.+
T Consensus 165 G----------~~--~~~~-~~~~~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~ 211 (399)
T 3ke6_A 165 G----------SG--TGFP-VRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAAS 211 (399)
T ss_dssp T----------SS--CCCC-CEEEECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred E----------CC--CCce-eEEEEECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHH
Confidence 2 00 0111 1245667899999999999998765 455555544
No 62
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=96.87 E-value=0.019 Score=59.48 Aligned_cols=142 Identities=20% Similarity=0.180 Sum_probs=70.5
Q ss_pred CCceEEEEecCCC-cchhhhHHHHHHHHHHHHHHhhhhHHhhhcccccHHHHHHHHHHHHHHHhhhccCCCceEEEEEEe
Q 009134 333 DKFGLFGICDGHG-GSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEGCTATVLLVWA 411 (542)
Q Consensus 333 ~~~~lfgV~DGhG-G~~~a~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~~~GsTatv~li~~ 411 (542)
++...++|+|+.| |-.+|-. +..+...+...+...... ......++.++|. .+|..+.....+.-+|+++...
T Consensus 201 ~~~~~~~i~Dv~GhGv~aa~~-~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~l~----~ln~~l~~~~~~~~~t~~~~~~ 274 (394)
T 3eq2_A 201 ERRVAFYLADVSGHGASSAFV-TVLLKFMTTRLLYESRRN-GTLPEFKPSEVLA----HINRGLINTKLGKHVTMLGGVI 274 (394)
T ss_dssp TTEEEEEEEEESSCSTTTHHH-HHHHHHHHHHHHHHSCSS-CSSSSCCHHHHHH----HHHHHHHHTTCCCCEEEEEEEE
T ss_pred CCcEEEEEEECCCCChHHHHH-HHHHHHHHHHHHHhhhcc-CCcccCCHHHHHH----HHHHHHhccCcCcEEEEEEEEE
Confidence 4456789999888 5555433 334433444333221100 0000112333333 3344444333344444444443
Q ss_pred cCCCcEEEEEEEeccce-EEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccCcccccccCcccccccCCCc
Q 009134 412 DGNANIFAQCANVGDSA-CVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQQDARF 490 (542)
Q Consensus 412 ~~~~~l~l~vANvGDSR-a~l~r~G~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~~~~Rv~Gl~lSRalGD~~~k~~~~~v 490 (542)
+....- +.++|.|-.. .++.++|++..+.....+ +| +
T Consensus 275 d~~~~~-l~~~~aGh~p~~~~~~~g~~~~l~~~~~p-------------------------------lG----------~ 312 (394)
T 3eq2_A 275 DLEKNS-LTYSIGGHLPLPVLFVEGQAGYLEGRGLP-------------------------------VG----------L 312 (394)
T ss_dssp ETTTTE-EEEEECSSSCCCEEEETTEEEECCCC--C-------------------------------CS----------C
T ss_pred ECCCCE-EEEEcCCCCCCcEEecCCceEecCCCCce-------------------------------eE----------e
Confidence 332222 6689999754 677888888877643322 22 1
Q ss_pred CccceeeeeEeeecCCCcEEEEEcCCCCCCCCH
Q 009134 491 SAEPYISPVVHIDQASKAFALLASDGFWDVISV 523 (542)
Q Consensus 491 ~~~P~I~~~~~~~~~~~d~lVLaSDGLwD~ls~ 523 (542)
....... ..++....++.++|.||||.|....
T Consensus 313 ~~~~~~~-~~~~~l~~gd~l~l~TDG~~e~~~~ 344 (394)
T 3eq2_A 313 FDDATYD-DRVMELPPSFSLSLFSDGILDVLPG 344 (394)
T ss_dssp CCCC--C-CEEEECCSSCEEEECSSCCCC----
T ss_pred cCCCceE-EEEEEeCCCCEEEEECCCcccccCc
Confidence 1111111 2256667899999999999997543
No 63
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=38.94 E-value=43 Score=32.02 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.6
Q ss_pred cEEEcCCCCCceEeCCccccccccEEEEeCCcceEEE
Q 009134 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239 (542)
Q Consensus 203 ~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l 239 (542)
.++||+...|+|.|++. ..|++|.++++ +.|.+
T Consensus 22 ~~tiG~~~~~~itl~~~---~~~i~l~~~~~-~~~~v 54 (238)
T 1wv3_A 22 TYTISEDERADITLKSL---GEVIHLEQNNQ-GTWQA 54 (238)
T ss_dssp CEEEESCTTSSEECTTC---CCCEEEEECTT-SCEEE
T ss_pred EEEECCCccceEEecCC---CccEEEEEccC-CeEEE
Confidence 79999999999999977 78999999873 37887
No 64
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=28.19 E-value=27 Score=27.21 Aligned_cols=31 Identities=6% Similarity=0.113 Sum_probs=23.3
Q ss_pred ccccCCccccCCCCCCCCCCCceecCCCCEEEecccccee
Q 009134 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (542)
Q Consensus 247 GT~vNg~~v~~p~~~~~~~~~~~~L~~GD~I~lG~~~~~~ 286 (542)
..+|||+.+..| ...+.+||.|++++..+.+
T Consensus 47 ~V~VNG~~v~~~---------~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 47 QVKVDGAVETRK---------RCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HHEETTBCCCCS---------SCCCCSSEEEEETTEEEEE
T ss_pred EEEECCEEecCC---------CCCCCCCCEEEECCEEEEE
Confidence 577899887653 2668899999998876544
No 65
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=32.58 E-value=14 Score=25.36 Aligned_cols=20 Identities=35% Similarity=0.632 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 009134 10 FTVLLMLILILLFIFIACKP 29 (542)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ 29 (542)
++.++++.||++++.+--||
T Consensus 17 l~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKP 36 (39)
Confidence 34444444444444444444
No 66
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.43 E-value=94 Score=22.84 Aligned_cols=13 Identities=15% Similarity=0.562 Sum_probs=5.1
Q ss_pred HHHHHHHHHHhhc
Q 009134 15 MLILILLFIFIAC 27 (542)
Q Consensus 15 ~~~~~~~~~~~~~ 27 (542)
.||++++++++-|
T Consensus 21 LLL~Lii~~LwK~ 33 (54)
T 2l8s_A 21 LLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 3333344444433
No 67
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.78 E-value=81 Score=21.35 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=5.0
Q ss_pred HHHHHHHHhhcc
Q 009134 17 ILILLFIFIACK 28 (542)
Q Consensus 17 ~~~~~~~~~~~~ 28 (542)
+++.++++|.+|
T Consensus 25 ~li~~l~~~~~r 36 (38)
T 2k1k_A 25 ALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHee
Confidence 334444444433
No 68
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=20.94 E-value=1.6e+02 Score=28.41 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=21.8
Q ss_pred cEEEcCCC--CCceEeCC---------------ccccccccEEEEe
Q 009134 203 PLTLGRVS--PSDVLLKD---------------SEVSGKHALINWN 231 (542)
Q Consensus 203 ~~~IGR~~--~~di~l~d---------------~~VSr~Ha~I~~~ 231 (542)
-+-|||.. ..|+++.| ..|||.-|+|..+
T Consensus 89 MFQIGRste~pIDFvV~dt~~g~~~~~~~~~~~StISRfACRI~~d 134 (263)
T 3ega_A 89 MFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCD 134 (263)
T ss_dssp EEEEESCCSTTCSEECCCC----------CCCCCCSCSSCEEEEEE
T ss_pred hhhhcCCCCCCCCeEEeccccccccCCcCCcccchhhheeEEEEec
Confidence 57799987 45666543 4799999999975
Done!