Query 009138
Match_columns 542
No_of_seqs 241 out of 1506
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 19:41:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 6E-175 2E-179 1395.8 37.8 439 102-542 1-440 (555)
2 1pj3_A NAD-dependent malic enz 100.0 1E-174 5E-179 1396.3 36.1 440 102-542 3-445 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-174 8E-179 1398.8 35.2 443 98-542 33-477 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-98 3E-103 794.9 20.9 296 185-540 59-365 (487)
5 2a9f_A Putative malic enzyme ( 100.0 2.4E-93 8.2E-98 744.6 15.1 297 174-540 24-327 (398)
6 1vl6_A Malate oxidoreductase; 100.0 6.1E-90 2.1E-94 717.6 13.9 297 174-540 28-332 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 7.3E-64 2.5E-68 529.1 17.1 296 176-540 24-334 (439)
8 3h9u_A Adenosylhomocysteinase; 99.0 1.3E-09 4.3E-14 115.8 11.4 130 350-513 171-311 (436)
9 3gvp_A Adenosylhomocysteinase 99.0 4.1E-09 1.4E-13 111.9 14.8 168 305-511 112-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.6 2.5E-08 8.7E-13 103.9 5.4 245 219-531 27-325 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 9E-06 3.1E-10 87.6 9.7 132 350-514 225-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.1 1.9E-05 6.4E-10 84.6 11.8 127 350-510 207-344 (464)
13 1l7d_A Nicotinamide nucleotide 97.5 0.0013 4.3E-08 67.7 14.2 225 219-500 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.5 0.00014 4.7E-09 76.8 7.1 110 380-507 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.4 0.0002 6.7E-09 75.0 6.7 104 381-501 182-305 (381)
16 3d4o_A Dipicolinate synthase s 97.0 0.0042 1.4E-07 61.3 11.8 133 351-512 117-256 (293)
17 3k92_A NAD-GDH, NAD-specific g 96.9 0.014 4.9E-07 61.9 15.2 187 305-513 126-338 (424)
18 4fcc_A Glutamate dehydrogenase 96.8 0.065 2.2E-06 57.4 19.0 182 305-501 141-354 (450)
19 3aoe_E Glutamate dehydrogenase 96.7 0.021 7.3E-07 60.4 14.7 186 305-513 123-332 (419)
20 3r3j_A Glutamate dehydrogenase 96.4 0.11 3.9E-06 55.6 18.0 189 306-513 146-368 (456)
21 1a4i_A Methylenetetrahydrofola 96.4 0.0067 2.3E-07 61.8 8.0 96 361-500 143-239 (301)
22 3l07_A Bifunctional protein fo 96.3 0.0082 2.8E-07 60.7 8.3 107 363-513 141-252 (285)
23 2tmg_A Protein (glutamate dehy 96.2 0.14 4.9E-06 54.1 17.4 186 306-513 115-328 (415)
24 3aog_A Glutamate dehydrogenase 96.2 0.075 2.5E-06 56.7 15.1 187 305-513 140-353 (440)
25 3p2o_A Bifunctional protein fo 96.1 0.013 4.3E-07 59.4 8.3 115 362-524 139-259 (285)
26 3jyo_A Quinate/shikimate dehyd 96.1 0.013 4.6E-07 58.3 8.2 88 367-474 111-205 (283)
27 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.081 2.8E-06 56.0 14.5 186 306-513 117-335 (421)
28 3ngx_A Bifunctional protein fo 96.0 0.013 4.4E-07 59.1 7.9 107 361-513 130-241 (276)
29 4a5o_A Bifunctional protein fo 95.9 0.018 6E-07 58.4 8.1 107 363-513 141-253 (286)
30 1b0a_A Protein (fold bifunctio 95.9 0.014 4.7E-07 59.2 7.3 109 361-513 137-251 (288)
31 1edz_A 5,10-methylenetetrahydr 95.8 0.01 3.6E-07 60.8 6.4 113 365-501 150-278 (320)
32 1v9l_A Glutamate dehydrogenase 95.8 0.062 2.1E-06 57.0 12.4 186 306-513 116-334 (421)
33 2bma_A Glutamate dehydrogenase 95.7 0.14 4.8E-06 55.1 14.7 187 306-513 159-381 (470)
34 4a26_A Putative C-1-tetrahydro 95.7 0.02 6.8E-07 58.3 7.8 110 360-513 142-265 (300)
35 1v8b_A Adenosylhomocysteinase; 95.6 0.058 2E-06 58.0 11.0 123 358-513 235-357 (479)
36 3don_A Shikimate dehydrogenase 95.5 0.014 4.8E-07 58.2 5.7 111 367-501 101-214 (277)
37 1gpj_A Glutamyl-tRNA reductase 95.5 0.1 3.4E-06 54.0 12.2 102 380-501 164-269 (404)
38 1c1d_A L-phenylalanine dehydro 95.5 0.042 1.4E-06 56.9 9.3 178 308-522 93-282 (355)
39 3tnl_A Shikimate dehydrogenase 95.4 0.026 9E-07 57.3 7.2 91 367-474 138-237 (315)
40 3t4e_A Quinate/shikimate dehyd 95.2 0.03 1E-06 56.9 7.1 90 368-474 133-231 (312)
41 2rir_A Dipicolinate synthase, 95.2 0.04 1.4E-06 54.4 7.8 122 374-525 148-270 (300)
42 2c2x_A Methylenetetrahydrofola 95.1 0.041 1.4E-06 55.6 7.5 99 361-501 136-235 (281)
43 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.011 3.7E-07 51.7 2.7 109 361-501 4-113 (144)
44 2egg_A AROE, shikimate 5-dehyd 95.0 0.025 8.7E-07 56.3 5.6 87 368-474 125-215 (297)
45 1bgv_A Glutamate dehydrogenase 95.0 0.64 2.2E-05 49.7 16.6 186 308-513 138-359 (449)
46 3u95_A Glycoside hydrolase, fa 94.8 0.051 1.7E-06 58.1 7.8 39 479-520 140-178 (477)
47 2v6b_A L-LDH, L-lactate dehydr 94.8 0.0086 2.9E-07 59.7 1.6 124 385-526 2-141 (304)
48 3d64_A Adenosylhomocysteinase; 94.7 0.063 2.2E-06 57.9 8.2 110 361-501 258-367 (494)
49 1pjc_A Protein (L-alanine dehy 94.7 0.061 2.1E-06 54.8 7.7 96 381-500 165-269 (361)
50 3u62_A Shikimate dehydrogenase 94.7 0.059 2E-06 52.8 7.3 145 314-499 42-201 (253)
51 3tri_A Pyrroline-5-carboxylate 94.6 0.064 2.2E-06 52.6 7.5 125 383-536 3-132 (280)
52 1mld_A Malate dehydrogenase; o 94.4 0.084 2.9E-06 53.0 7.7 101 385-501 2-120 (314)
53 2o4c_A Erythronate-4-phosphate 94.3 0.28 9.7E-06 51.1 11.9 117 351-499 81-208 (380)
54 1pzg_A LDH, lactate dehydrogen 94.2 0.082 2.8E-06 53.5 7.3 120 384-524 10-157 (331)
55 1leh_A Leucine dehydrogenase; 94.2 0.11 3.7E-06 53.9 8.2 169 311-513 93-274 (364)
56 1gtm_A Glutamate dehydrogenase 94.0 0.56 1.9E-05 49.4 13.5 115 306-432 115-251 (419)
57 1hyh_A L-hicdh, L-2-hydroxyiso 94.0 0.064 2.2E-06 53.1 5.9 102 384-502 2-126 (309)
58 3dtt_A NADP oxidoreductase; st 94.0 0.069 2.3E-06 51.0 5.9 109 377-501 13-127 (245)
59 3mw9_A GDH 1, glutamate dehydr 93.9 0.35 1.2E-05 52.5 11.7 179 305-501 136-352 (501)
60 2eez_A Alanine dehydrogenase; 93.8 0.12 4.1E-06 52.6 7.8 97 380-500 163-268 (369)
61 3oet_A Erythronate-4-phosphate 93.7 0.36 1.2E-05 50.5 11.2 119 350-500 83-212 (381)
62 2hk9_A Shikimate dehydrogenase 93.7 0.13 4.4E-06 50.3 7.4 107 368-499 114-222 (275)
63 3ce6_A Adenosylhomocysteinase; 93.5 0.53 1.8E-05 50.7 12.4 107 375-512 266-373 (494)
64 2ekl_A D-3-phosphoglycerate de 93.5 0.73 2.5E-05 46.3 12.7 122 350-500 90-234 (313)
65 1b8p_A Protein (malate dehydro 93.5 0.045 1.5E-06 55.1 3.9 122 384-515 6-147 (329)
66 3fef_A Putative glucosidase LP 93.3 0.086 2.9E-06 56.2 5.9 125 381-524 3-169 (450)
67 2g1u_A Hypothetical protein TM 93.3 0.13 4.4E-06 45.3 6.1 102 379-499 15-119 (155)
68 3o8q_A Shikimate 5-dehydrogena 93.3 0.12 4.1E-06 51.5 6.4 50 367-427 110-159 (281)
69 3fbt_A Chorismate mutase and s 93.3 0.11 3.8E-06 51.9 6.3 104 368-501 107-218 (282)
70 2ewd_A Lactate dehydrogenase,; 93.1 0.081 2.8E-06 52.6 4.9 100 384-502 5-125 (317)
71 2i6t_A Ubiquitin-conjugating e 93.0 0.17 5.9E-06 50.8 7.3 121 384-525 15-151 (303)
72 3pwz_A Shikimate dehydrogenase 93.0 0.12 4.2E-06 51.1 6.1 155 314-501 44-219 (272)
73 4e12_A Diketoreductase; oxidor 92.9 0.035 1.2E-06 54.2 2.0 131 384-540 5-159 (283)
74 1oju_A MDH, malate dehydrogena 92.9 0.053 1.8E-06 54.4 3.2 124 385-524 2-143 (294)
75 2hjr_A Malate dehydrogenase; m 92.7 0.081 2.8E-06 53.4 4.4 126 384-527 15-159 (328)
76 2d5c_A AROE, shikimate 5-dehyd 92.7 0.17 5.9E-06 48.7 6.4 104 368-499 102-207 (263)
77 1ldn_A L-lactate dehydrogenase 92.6 0.055 1.9E-06 54.3 2.9 126 384-525 7-149 (316)
78 2hmt_A YUAA protein; RCK, KTN, 92.6 0.07 2.4E-06 44.9 3.1 103 381-501 4-108 (144)
79 2dbq_A Glyoxylate reductase; D 92.6 1.5 5.2E-05 44.2 13.5 121 350-499 89-241 (334)
80 2gcg_A Glyoxylate reductase/hy 92.5 0.88 3E-05 45.8 11.6 140 331-499 80-247 (330)
81 1o6z_A MDH, malate dehydrogena 92.5 0.058 2E-06 53.8 2.9 125 384-525 1-145 (303)
82 2zqz_A L-LDH, L-lactate dehydr 92.4 0.097 3.3E-06 53.0 4.5 127 383-525 9-151 (326)
83 3d0o_A L-LDH 1, L-lactate dehy 92.4 0.088 3E-06 52.9 4.1 129 381-525 4-149 (317)
84 1t2d_A LDH-P, L-lactate dehydr 92.4 0.12 4E-06 52.3 5.0 120 384-525 5-152 (322)
85 3hdj_A Probable ornithine cycl 92.4 0.55 1.9E-05 47.3 9.9 110 371-511 111-227 (313)
86 3tum_A Shikimate dehydrogenase 92.4 0.22 7.4E-06 49.5 6.8 116 368-508 110-232 (269)
87 1s6y_A 6-phospho-beta-glucosid 92.3 0.065 2.2E-06 56.9 3.1 127 384-524 8-175 (450)
88 1ez4_A Lactate dehydrogenase; 92.2 0.12 4.1E-06 52.2 4.8 126 384-525 6-147 (318)
89 1obb_A Maltase, alpha-glucosid 92.1 0.12 4E-06 55.6 4.9 125 383-525 3-175 (480)
90 1jw9_B Molybdopterin biosynthe 91.9 0.13 4.5E-06 49.8 4.6 103 380-497 28-153 (249)
91 2vhw_A Alanine dehydrogenase; 91.9 0.19 6.4E-06 51.6 5.9 96 380-499 165-269 (377)
92 2rcy_A Pyrroline carboxylate r 91.9 0.8 2.7E-05 43.2 9.9 92 383-502 4-95 (262)
93 1x7d_A Ornithine cyclodeaminas 91.8 0.26 8.9E-06 50.4 6.9 115 368-510 116-239 (350)
94 1zud_1 Adenylyltransferase THI 91.7 0.18 6.2E-06 49.0 5.4 102 380-497 25-150 (251)
95 4g2n_A D-isomer specific 2-hyd 91.7 1.1 3.9E-05 45.8 11.5 139 350-519 116-282 (345)
96 3vku_A L-LDH, L-lactate dehydr 91.6 0.16 5.6E-06 51.7 5.1 127 383-525 9-151 (326)
97 1a5z_A L-lactate dehydrogenase 91.5 0.21 7.3E-06 49.9 5.8 120 385-525 2-142 (319)
98 3ba1_A HPPR, hydroxyphenylpyru 91.5 1 3.4E-05 45.9 10.8 119 351-501 110-254 (333)
99 1nyt_A Shikimate 5-dehydrogena 91.5 0.32 1.1E-05 47.4 6.9 49 367-427 103-151 (271)
100 1y6j_A L-lactate dehydrogenase 91.5 0.19 6.4E-06 50.6 5.3 121 384-525 8-149 (318)
101 1u8x_X Maltose-6'-phosphate gl 91.5 0.088 3E-06 56.3 3.1 126 383-524 28-194 (472)
102 1txg_A Glycerol-3-phosphate de 91.4 0.34 1.2E-05 47.3 7.0 94 385-501 2-107 (335)
103 2i99_A MU-crystallin homolog; 91.3 0.53 1.8E-05 46.9 8.3 113 368-508 122-237 (312)
104 2dpo_A L-gulonate 3-dehydrogen 91.2 0.095 3.2E-06 53.0 2.8 132 383-540 6-161 (319)
105 1wwk_A Phosphoglycerate dehydr 91.1 1.2 4.2E-05 44.5 10.8 120 351-499 89-233 (307)
106 4huj_A Uncharacterized protein 91.1 0.29 9.9E-06 45.9 5.9 93 384-502 24-117 (220)
107 1smk_A Malate dehydrogenase, g 91.0 0.32 1.1E-05 49.0 6.5 104 384-501 9-128 (326)
108 1p77_A Shikimate 5-dehydrogena 91.0 0.27 9.1E-06 48.0 5.7 49 367-427 103-151 (272)
109 3d1l_A Putative NADP oxidoredu 90.8 0.18 6.3E-06 48.0 4.3 99 379-501 6-105 (266)
110 1up7_A 6-phospho-beta-glucosid 90.8 0.25 8.5E-06 52.0 5.7 124 384-524 3-164 (417)
111 3k5p_A D-3-phosphoglycerate de 90.8 3.4 0.00012 43.6 14.2 138 349-519 101-263 (416)
112 3jtm_A Formate dehydrogenase, 90.6 1.5 5.2E-05 45.0 11.2 142 350-520 108-276 (351)
113 4dgs_A Dehydrogenase; structur 90.6 1.4 4.6E-05 45.2 10.7 131 351-513 116-273 (340)
114 3gvi_A Malate dehydrogenase; N 90.6 0.21 7.2E-06 50.8 4.7 126 381-524 5-149 (324)
115 3kkj_A Amine oxidase, flavin-c 90.4 0.23 8E-06 42.8 4.2 31 385-427 4-34 (336)
116 2xxj_A L-LDH, L-lactate dehydr 90.4 0.12 4.2E-06 51.8 2.8 125 384-525 1-142 (310)
117 1ur5_A Malate dehydrogenase; o 90.4 0.19 6.6E-06 50.2 4.2 125 384-525 3-145 (309)
118 1qp8_A Formate dehydrogenase; 90.3 2.9 0.0001 41.8 12.7 117 350-499 71-211 (303)
119 1xdw_A NAD+-dependent (R)-2-hy 90.3 2.1 7.1E-05 43.2 11.8 137 331-499 73-235 (331)
120 2zyd_A 6-phosphogluconate dehy 90.3 0.56 1.9E-05 49.8 7.9 102 380-501 12-116 (480)
121 2cuk_A Glycerate dehydrogenase 90.3 2 6.9E-05 43.0 11.5 117 350-500 87-231 (311)
122 1lld_A L-lactate dehydrogenase 90.1 0.2 6.8E-06 49.1 4.0 105 383-502 7-128 (319)
123 1lu9_A Methylene tetrahydromet 90.1 1.3 4.5E-05 43.0 9.8 119 333-474 64-199 (287)
124 1omo_A Alanine dehydrogenase; 90.1 1.1 3.7E-05 45.1 9.4 112 368-509 112-229 (322)
125 1f0y_A HCDH, L-3-hydroxyacyl-C 89.9 0.36 1.2E-05 47.1 5.6 130 384-540 16-174 (302)
126 3p7m_A Malate dehydrogenase; p 89.9 0.2 6.8E-06 50.8 3.8 127 381-524 3-147 (321)
127 3nep_X Malate dehydrogenase; h 89.7 0.2 6.8E-06 50.8 3.6 124 385-524 2-143 (314)
128 3tl2_A Malate dehydrogenase; c 89.7 0.26 8.7E-06 49.9 4.4 127 381-524 6-152 (315)
129 1guz_A Malate dehydrogenase; o 89.5 0.33 1.1E-05 48.3 5.0 100 385-501 2-121 (310)
130 4hy3_A Phosphoglycerate oxidor 89.4 1.3 4.5E-05 45.9 9.6 138 351-519 120-285 (365)
131 1z82_A Glycerol-3-phosphate de 89.3 0.32 1.1E-05 48.2 4.8 98 383-503 14-116 (335)
132 2d0i_A Dehydrogenase; structur 89.1 2.3 7.8E-05 43.0 11.0 91 379-499 142-236 (333)
133 2j6i_A Formate dehydrogenase; 89.1 1.6 5.4E-05 44.9 9.9 144 331-500 88-259 (364)
134 3pqe_A L-LDH, L-lactate dehydr 89.1 0.22 7.5E-06 50.7 3.5 128 383-526 5-149 (326)
135 1dxy_A D-2-hydroxyisocaproate 89.1 3.7 0.00013 41.5 12.4 138 350-520 90-253 (333)
136 3i83_A 2-dehydropantoate 2-red 89.1 0.46 1.6E-05 47.0 5.7 98 384-502 3-109 (320)
137 1nvt_A Shikimate 5'-dehydrogen 89.1 0.33 1.1E-05 47.5 4.6 49 366-427 111-159 (287)
138 3ado_A Lambda-crystallin; L-gu 89.1 0.62 2.1E-05 47.4 6.7 137 383-540 6-161 (319)
139 4e21_A 6-phosphogluconate dehy 88.9 1.3 4.3E-05 45.5 8.9 96 381-501 20-118 (358)
140 1sc6_A PGDH, D-3-phosphoglycer 88.8 5.1 0.00017 41.9 13.6 120 349-499 90-234 (404)
141 3hg7_A D-isomer specific 2-hyd 88.8 1 3.6E-05 45.8 8.2 121 351-500 89-232 (324)
142 2d4a_B Malate dehydrogenase; a 88.8 0.26 9E-06 49.4 3.7 119 385-525 1-142 (308)
143 1x0v_A GPD-C, GPDH-C, glycerol 88.7 0.85 2.9E-05 45.1 7.4 111 383-502 8-128 (354)
144 3gt0_A Pyrroline-5-carboxylate 88.7 0.77 2.6E-05 43.5 6.8 122 384-532 3-126 (247)
145 2raf_A Putative dinucleotide-b 88.6 0.93 3.2E-05 42.3 7.2 37 379-427 15-51 (209)
146 3k96_A Glycerol-3-phosphate de 88.6 1 3.5E-05 46.0 8.0 128 383-528 29-165 (356)
147 3evt_A Phosphoglycerate dehydr 88.5 1.6 5.4E-05 44.4 9.3 135 350-513 83-242 (324)
148 2yq5_A D-isomer specific 2-hyd 88.3 4.9 0.00017 41.1 12.8 121 350-501 92-239 (343)
149 1hye_A L-lactate/malate dehydr 88.2 0.58 2E-05 46.7 5.8 125 385-526 2-149 (313)
150 3h8v_A Ubiquitin-like modifier 88.2 0.5 1.7E-05 47.6 5.3 39 379-428 32-70 (292)
151 4fgw_A Glycerol-3-phosphate de 88.1 0.5 1.7E-05 49.5 5.5 97 384-489 35-141 (391)
152 2p4q_A 6-phosphogluconate dehy 88.1 0.85 2.9E-05 48.8 7.4 98 384-501 11-112 (497)
153 2pi1_A D-lactate dehydrogenase 88.1 2.9 9.8E-05 42.5 10.9 138 351-520 87-250 (334)
154 1hdo_A Biliverdin IX beta redu 88.0 1.8 6E-05 38.3 8.3 98 383-498 3-111 (206)
155 3k6j_A Protein F01G10.3, confi 87.9 0.63 2.1E-05 49.7 6.1 134 384-540 55-204 (460)
156 1j4a_A D-LDH, D-lactate dehydr 87.6 4.7 0.00016 40.7 12.1 140 349-520 91-255 (333)
157 3abi_A Putative uncharacterize 87.4 0.46 1.6E-05 47.9 4.6 117 384-530 17-137 (365)
158 2w2k_A D-mandelate dehydrogena 87.4 4.4 0.00015 41.2 11.8 97 378-500 158-258 (348)
159 1y7t_A Malate dehydrogenase; N 87.3 0.48 1.6E-05 47.1 4.5 110 384-501 5-133 (327)
160 3rui_A Ubiquitin-like modifier 87.3 0.35 1.2E-05 49.9 3.6 38 380-428 31-68 (340)
161 1ks9_A KPA reductase;, 2-dehyd 87.3 1 3.6E-05 42.6 6.7 95 385-501 2-100 (291)
162 3gvx_A Glycerate dehydrogenase 87.2 3.6 0.00012 41.1 10.8 107 362-500 85-211 (290)
163 1yj8_A Glycerol-3-phosphate de 86.9 0.79 2.7E-05 46.2 5.9 110 384-502 22-145 (375)
164 1hyu_A AHPF, alkyl hydroperoxi 86.8 0.53 1.8E-05 49.8 4.8 99 314-427 135-244 (521)
165 2nac_A NAD-dependent formate d 86.6 2.8 9.5E-05 43.8 10.0 112 361-499 149-284 (393)
166 4gsl_A Ubiquitin-like modifier 86.4 0.6 2.1E-05 51.8 5.1 38 380-428 323-360 (615)
167 2iz1_A 6-phosphogluconate dehy 86.3 1.1 3.9E-05 47.2 7.0 99 383-501 5-106 (474)
168 1jay_A Coenzyme F420H2:NADP+ o 86.3 0.41 1.4E-05 43.8 3.2 94 385-502 2-101 (212)
169 1npy_A Hypothetical shikimate 86.3 0.91 3.1E-05 44.8 5.9 48 368-427 105-152 (271)
170 3c85_A Putative glutathione-re 86.2 0.25 8.5E-06 44.4 1.7 102 380-499 36-140 (183)
171 3pp8_A Glyoxylate/hydroxypyruv 86.2 2 6.7E-05 43.4 8.4 139 350-519 86-248 (315)
172 4egb_A DTDP-glucose 4,6-dehydr 86.1 2.3 7.8E-05 41.2 8.5 106 381-498 22-149 (346)
173 4ina_A Saccharopine dehydrogen 86.0 0.91 3.1E-05 46.9 5.9 96 384-499 2-108 (405)
174 2izz_A Pyrroline-5-carboxylate 85.9 2.3 7.8E-05 42.2 8.6 100 382-502 21-122 (322)
175 3b1f_A Putative prephenate deh 85.9 1.2 4E-05 42.9 6.3 96 383-500 6-103 (290)
176 2vns_A Metalloreductase steap3 85.8 0.71 2.4E-05 43.2 4.6 95 379-501 24-118 (215)
177 1gdh_A D-glycerate dehydrogena 85.7 4 0.00014 41.0 10.3 122 350-499 89-239 (320)
178 1lss_A TRK system potassium up 85.6 0.93 3.2E-05 37.9 4.8 97 383-501 4-106 (140)
179 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.5 1 3.5E-05 47.7 6.2 97 385-501 3-106 (478)
180 2x0j_A Malate dehydrogenase; o 85.4 0.95 3.3E-05 45.5 5.6 114 385-514 2-131 (294)
181 3fi9_A Malate dehydrogenase; s 85.4 0.53 1.8E-05 48.3 3.8 118 381-515 6-140 (343)
182 4ej6_A Putative zinc-binding d 85.3 7.8 0.00027 38.9 12.3 136 358-523 159-309 (370)
183 4dll_A 2-hydroxy-3-oxopropiona 85.3 0.74 2.5E-05 45.7 4.7 93 381-499 29-125 (320)
184 3ic5_A Putative saccharopine d 85.2 0.98 3.3E-05 36.6 4.7 87 383-488 5-92 (118)
185 3vh1_A Ubiquitin-like modifier 85.1 0.71 2.4E-05 51.1 4.9 38 379-427 323-360 (598)
186 2g76_A 3-PGDH, D-3-phosphoglyc 85.0 4 0.00014 41.5 10.0 120 351-500 112-257 (335)
187 3gg9_A D-3-phosphoglycerate de 84.9 3.3 0.00011 42.4 9.5 136 350-513 97-266 (352)
188 4aj2_A L-lactate dehydrogenase 84.6 0.45 1.5E-05 48.6 2.8 130 380-526 16-163 (331)
189 2ew2_A 2-dehydropantoate 2-red 84.4 0.43 1.5E-05 45.7 2.4 100 384-501 4-111 (316)
190 2uyy_A N-PAC protein; long-cha 84.3 1.3 4.5E-05 43.2 6.0 92 384-500 31-126 (316)
191 2dq4_A L-threonine 3-dehydroge 84.3 1.8 6.1E-05 42.8 6.9 138 360-523 143-286 (343)
192 2h78_A Hibadh, 3-hydroxyisobut 84.1 0.89 3E-05 44.1 4.6 91 384-500 4-99 (302)
193 3l6d_A Putative oxidoreductase 84.1 1.2 4.1E-05 43.9 5.6 94 380-499 6-102 (306)
194 1mx3_A CTBP1, C-terminal bindi 83.9 5.6 0.00019 40.6 10.6 154 331-513 89-274 (347)
195 2qrj_A Saccharopine dehydrogen 83.9 3.6 0.00012 43.3 9.3 82 383-498 214-300 (394)
196 2z2v_A Hypothetical protein PH 83.8 0.73 2.5E-05 47.2 4.0 119 383-530 16-137 (365)
197 3ldh_A Lactate dehydrogenase; 83.7 0.51 1.7E-05 48.4 2.8 126 383-525 21-164 (330)
198 3pef_A 6-phosphogluconate dehy 83.6 1.3 4.5E-05 42.7 5.6 91 384-499 2-96 (287)
199 3r6d_A NAD-dependent epimerase 83.6 1.1 3.9E-05 40.7 4.8 96 384-498 6-108 (221)
200 4gwg_A 6-phosphogluconate dehy 83.5 2.4 8.1E-05 45.5 8.0 99 383-501 4-106 (484)
201 3h5n_A MCCB protein; ubiquitin 83.5 0.79 2.7E-05 46.9 4.1 101 379-496 114-240 (353)
202 3e8x_A Putative NAD-dependent 83.5 2 6.7E-05 39.6 6.4 101 379-499 17-132 (236)
203 3ip1_A Alcohol dehydrogenase, 83.3 7 0.00024 39.7 11.0 125 379-523 210-341 (404)
204 4e5n_A Thermostable phosphite 83.0 3 0.0001 42.3 8.1 141 350-520 89-256 (330)
205 3doj_A AT3G25530, dehydrogenas 82.8 2.3 7.9E-05 41.8 7.0 95 380-499 18-116 (310)
206 1bg6_A N-(1-D-carboxylethyl)-L 82.6 1.5 5E-05 43.1 5.5 93 384-499 5-110 (359)
207 3c24_A Putative oxidoreductase 82.4 1.6 5.5E-05 42.1 5.6 91 384-501 12-104 (286)
208 1y8q_A Ubiquitin-like 1 activa 82.3 0.96 3.3E-05 46.1 4.2 37 380-427 33-69 (346)
209 3vrd_B FCCB subunit, flavocyto 82.2 1 3.5E-05 44.9 4.3 35 383-427 2-36 (401)
210 3qsg_A NAD-binding phosphogluc 81.9 6.2 0.00021 38.9 9.7 93 383-499 24-118 (312)
211 1yb4_A Tartronic semialdehyde 81.8 1.8 6.2E-05 41.4 5.7 91 384-500 4-98 (295)
212 3cky_A 2-hydroxymethyl glutara 81.8 1.3 4.3E-05 42.7 4.6 92 384-501 5-101 (301)
213 3pdu_A 3-hydroxyisobutyrate de 81.7 1.7 5.8E-05 42.0 5.5 32 384-427 2-33 (287)
214 3gpi_A NAD-dependent epimerase 81.6 1.1 3.8E-05 42.4 4.0 96 382-498 2-109 (286)
215 3hhp_A Malate dehydrogenase; M 81.4 1.7 5.9E-05 43.8 5.6 123 385-524 2-147 (312)
216 2pzm_A Putative nucleotide sug 81.3 3.7 0.00013 39.8 7.8 103 379-498 16-136 (330)
217 3phh_A Shikimate dehydrogenase 81.2 1.3 4.4E-05 44.1 4.5 100 368-500 107-212 (269)
218 3i6i_A Putative leucoanthocyan 81.0 0.93 3.2E-05 44.4 3.4 104 380-495 7-117 (346)
219 2pgd_A 6-phosphogluconate dehy 80.9 3.2 0.00011 43.8 7.7 98 384-501 3-104 (482)
220 1id1_A Putative potassium chan 80.9 1.4 4.7E-05 38.5 4.1 34 382-427 2-35 (153)
221 2q1w_A Putative nucleotide sug 80.8 5.6 0.00019 38.5 8.9 104 380-498 18-137 (333)
222 3dhn_A NAD-dependent epimerase 80.7 2.6 9E-05 38.2 6.1 97 384-498 5-112 (227)
223 4ezb_A Uncharacterized conserv 80.5 1.7 5.8E-05 43.3 5.1 33 384-427 25-57 (317)
224 3fwz_A Inner membrane protein 80.3 0.98 3.3E-05 39.1 3.0 32 384-427 8-39 (140)
225 3ggo_A Prephenate dehydrogenas 80.3 3.9 0.00013 40.8 7.7 35 383-427 33-67 (314)
226 4hb9_A Similarities with proba 80.1 1.5 5.1E-05 42.9 4.5 32 384-427 2-33 (412)
227 5mdh_A Malate dehydrogenase; o 79.6 0.8 2.7E-05 46.6 2.5 131 384-525 4-155 (333)
228 2g5c_A Prephenate dehydrogenas 79.3 3.6 0.00012 39.3 6.8 97 384-501 2-99 (281)
229 4id9_A Short-chain dehydrogena 78.8 4.8 0.00016 38.9 7.6 96 379-498 15-126 (347)
230 1vpd_A Tartronate semialdehyde 78.8 1.5 5E-05 42.2 3.9 92 384-501 6-102 (299)
231 3slg_A PBGP3 protein; structur 78.3 9.9 0.00034 37.1 9.8 101 380-498 21-141 (372)
232 2pv7_A T-protein [includes: ch 78.2 5.7 0.0002 38.8 8.1 32 384-427 22-54 (298)
233 4a9w_A Monooxygenase; baeyer-v 78.1 1.5 5.3E-05 41.7 3.8 34 383-428 3-36 (357)
234 3qha_A Putative oxidoreductase 77.6 3.3 0.00011 40.5 6.1 91 383-499 15-106 (296)
235 3d1c_A Flavin-containing putat 77.6 1.9 6.4E-05 41.9 4.3 36 382-428 3-38 (369)
236 1yqd_A Sinapyl alcohol dehydro 77.5 6.6 0.00023 39.3 8.4 130 366-522 171-304 (366)
237 3kb6_A D-lactate dehydrogenase 77.4 11 0.00037 38.2 10.0 119 351-499 87-231 (334)
238 1i36_A Conserved hypothetical 77.2 4.4 0.00015 38.2 6.7 20 385-404 2-21 (264)
239 3l4b_C TRKA K+ channel protien 77.2 1.3 4.4E-05 41.0 2.9 95 385-499 2-100 (218)
240 3o38_A Short chain dehydrogena 77.0 4.5 0.00015 38.0 6.7 76 380-474 19-112 (266)
241 3hn2_A 2-dehydropantoate 2-red 76.4 3.2 0.00011 40.8 5.7 101 384-502 3-107 (312)
242 3fbs_A Oxidoreductase; structu 76.1 2.3 7.9E-05 39.6 4.3 32 384-427 3-34 (297)
243 3m2p_A UDP-N-acetylglucosamine 76.0 8 0.00027 36.9 8.2 93 384-498 3-109 (311)
244 3oz2_A Digeranylgeranylglycero 76.0 2.1 7.3E-05 41.3 4.2 31 385-427 6-36 (397)
245 2z1m_A GDP-D-mannose dehydrata 76.0 5.7 0.00019 38.0 7.1 103 382-498 2-127 (345)
246 1tt5_B Ubiquitin-activating en 75.9 1.6 5.6E-05 46.1 3.6 38 379-427 36-73 (434)
247 3uko_A Alcohol dehydrogenase c 75.9 4.9 0.00017 40.3 6.9 38 378-426 189-226 (378)
248 3lzw_A Ferredoxin--NADP reduct 74.9 2.6 8.8E-05 39.9 4.4 33 383-427 7-39 (332)
249 3alj_A 2-methyl-3-hydroxypyrid 74.8 2.7 9.2E-05 41.6 4.7 38 380-429 8-45 (379)
250 3f8d_A Thioredoxin reductase ( 74.8 2.6 8.8E-05 39.7 4.3 33 383-427 15-47 (323)
251 3nrc_A Enoyl-[acyl-carrier-pro 74.8 5.3 0.00018 38.2 6.6 79 380-475 23-115 (280)
252 1ygy_A PGDH, D-3-phosphoglycer 74.7 13 0.00046 39.7 10.4 120 350-498 88-232 (529)
253 2yjz_A Metalloreductase steap4 76.7 0.62 2.1E-05 43.6 0.0 92 381-501 17-108 (201)
254 3llv_A Exopolyphosphatase-rela 74.4 2.1 7.2E-05 36.5 3.3 34 382-427 5-38 (141)
255 2ph5_A Homospermidine synthase 74.3 7.3 0.00025 42.1 8.1 100 382-499 12-115 (480)
256 2zbw_A Thioredoxin reductase; 74.2 2.7 9.1E-05 40.3 4.3 34 383-428 5-38 (335)
257 2bka_A CC3, TAT-interacting pr 74.1 7.1 0.00024 35.6 7.0 102 381-498 16-132 (242)
258 4b8w_A GDP-L-fucose synthase; 74.0 5.2 0.00018 37.4 6.2 93 380-498 3-113 (319)
259 3lk7_A UDP-N-acetylmuramoylala 73.9 6.8 0.00023 40.7 7.6 115 380-525 6-120 (451)
260 4b4u_A Bifunctional protein fo 73.8 9 0.00031 39.1 8.3 95 363-501 159-255 (303)
261 3fg2_P Putative rubredoxin red 73.7 2.9 9.9E-05 42.1 4.6 35 384-428 2-36 (404)
262 3s2u_A UDP-N-acetylglucosamine 73.0 5.4 0.00018 39.9 6.4 41 455-499 84-124 (365)
263 3klj_A NAD(FAD)-dependent dehy 73.0 3.6 0.00012 41.8 5.2 37 382-430 8-44 (385)
264 1y8q_B Anthracycline-, ubiquit 73.0 2.1 7.1E-05 47.7 3.6 37 380-427 14-50 (640)
265 3itj_A Thioredoxin reductase 1 72.7 2.4 8.1E-05 40.3 3.5 33 383-427 22-54 (338)
266 3hyw_A Sulfide-quinone reducta 72.6 2.7 9.1E-05 43.0 4.1 34 384-427 3-36 (430)
267 3ehe_A UDP-glucose 4-epimerase 72.6 13 0.00043 35.5 8.6 95 385-498 3-114 (313)
268 3ef6_A Toluene 1,2-dioxygenase 72.5 5.6 0.00019 40.3 6.5 37 384-430 3-39 (410)
269 1e6u_A GDP-fucose synthetase; 72.1 6.5 0.00022 37.4 6.5 87 383-498 3-107 (321)
270 2jae_A L-amino acid oxidase; o 72.1 3.1 0.00011 42.6 4.5 42 376-429 4-45 (489)
271 2vou_A 2,6-dihydroxypyridine h 72.0 3.8 0.00013 40.9 5.0 34 382-427 4-37 (397)
272 3e48_A Putative nucleoside-dip 71.9 6.2 0.00021 37.2 6.2 97 385-498 2-106 (289)
273 3vtz_A Glucose 1-dehydrogenase 71.9 10 0.00035 36.2 7.8 78 378-474 9-92 (269)
274 1n2s_A DTDP-4-, DTDP-glucose o 71.9 4.5 0.00016 38.1 5.3 86 385-498 2-104 (299)
275 2ahr_A Putative pyrroline carb 71.8 3.2 0.00011 39.2 4.2 89 384-500 4-92 (259)
276 2xdo_A TETX2 protein; tetracyc 71.8 3.2 0.00011 41.4 4.4 36 381-428 24-59 (398)
277 3rp8_A Flavoprotein monooxygen 71.7 3.4 0.00012 41.2 4.6 36 381-428 21-56 (407)
278 2c20_A UDP-glucose 4-epimerase 71.5 9.9 0.00034 36.3 7.6 99 384-498 2-118 (330)
279 3nix_A Flavoprotein/dehydrogen 71.4 4.6 0.00016 40.1 5.4 34 383-428 5-38 (421)
280 3cgv_A Geranylgeranyl reductas 71.2 2.8 9.6E-05 41.0 3.8 34 383-428 4-37 (397)
281 3ek2_A Enoyl-(acyl-carrier-pro 71.2 4.8 0.00016 37.6 5.2 81 378-474 9-103 (271)
282 3dme_A Conserved exported prot 71.1 3.7 0.00013 39.4 4.5 33 383-427 4-36 (369)
283 3grf_A Ornithine carbamoyltran 70.9 13 0.00044 38.1 8.7 131 321-469 96-240 (328)
284 3lxd_A FAD-dependent pyridine 70.8 3.4 0.00012 41.7 4.4 37 382-428 8-44 (415)
285 3ab1_A Ferredoxin--NADP reduct 70.8 3.7 0.00013 40.0 4.5 35 382-428 13-47 (360)
286 1yvv_A Amine oxidase, flavin-c 70.3 3.8 0.00013 39.1 4.4 33 384-428 3-35 (336)
287 2q7v_A Thioredoxin reductase; 70.3 3.7 0.00013 39.3 4.3 33 383-427 8-40 (325)
288 2x3n_A Probable FAD-dependent 70.3 3.4 0.00012 41.0 4.2 35 383-429 6-40 (399)
289 1ryi_A Glycine oxidase; flavop 70.2 3.6 0.00012 40.2 4.3 35 383-429 17-51 (382)
290 3cty_A Thioredoxin reductase; 70.1 3.6 0.00012 39.3 4.2 33 383-427 16-48 (319)
291 3h8l_A NADH oxidase; membrane 70.0 3.8 0.00013 41.1 4.5 36 384-428 2-37 (409)
292 2cvz_A Dehydrogenase, 3-hydrox 70.0 2.6 8.9E-05 40.1 3.1 89 385-500 3-92 (289)
293 2p5y_A UDP-glucose 4-epimerase 69.9 9.9 0.00034 36.2 7.2 98 385-498 2-117 (311)
294 3r9u_A Thioredoxin reductase; 69.9 3.9 0.00013 38.3 4.3 33 383-427 4-37 (315)
295 2q1s_A Putative nucleotide sug 69.7 7.9 0.00027 38.3 6.7 103 380-498 29-151 (377)
296 1np3_A Ketol-acid reductoisome 69.7 6.4 0.00022 39.5 6.1 88 381-495 14-104 (338)
297 3ew7_A LMO0794 protein; Q8Y8U8 69.6 9.7 0.00033 33.9 6.7 91 385-498 2-103 (221)
298 2wm3_A NMRA-like family domain 69.5 2.7 9.2E-05 40.0 3.1 99 383-499 5-115 (299)
299 1y56_B Sarcosine oxidase; dehy 69.5 3.9 0.00013 40.0 4.4 34 383-428 5-38 (382)
300 2ywl_A Thioredoxin reductase r 69.4 4.4 0.00015 35.6 4.3 32 384-427 2-33 (180)
301 3qvo_A NMRA family protein; st 68.8 9.8 0.00033 35.1 6.7 101 381-498 21-125 (236)
302 2x4g_A Nucleoside-diphosphate- 68.7 12 0.00042 35.7 7.7 97 384-498 14-126 (342)
303 1pqw_A Polyketide synthase; ro 68.6 13 0.00045 33.2 7.4 50 366-427 22-72 (198)
304 2yy7_A L-threonine dehydrogena 68.6 5.2 0.00018 37.9 4.9 98 384-497 3-117 (312)
305 2gag_B Heterotetrameric sarcos 68.5 4.8 0.00016 39.5 4.8 36 383-428 21-56 (405)
306 1k0i_A P-hydroxybenzoate hydro 68.2 4.9 0.00017 39.7 4.8 33 384-428 3-35 (394)
307 3gg2_A Sugar dehydrogenase, UD 68.2 5.2 0.00018 42.1 5.3 32 384-427 3-34 (450)
308 3c96_A Flavin-containing monoo 68.1 4.4 0.00015 40.6 4.5 34 383-427 4-37 (410)
309 2gf3_A MSOX, monomeric sarcosi 68.1 4.4 0.00015 39.6 4.4 34 384-429 4-37 (389)
310 1xq6_A Unknown protein; struct 68.0 7.9 0.00027 35.1 5.8 101 381-498 2-133 (253)
311 1hdc_A 3-alpha, 20 beta-hydrox 67.9 6.9 0.00024 36.8 5.6 36 380-427 2-38 (254)
312 1trb_A Thioredoxin reductase; 67.8 2.9 9.8E-05 39.7 2.9 34 382-427 4-37 (320)
313 3pid_A UDP-glucose 6-dehydroge 67.7 6.8 0.00023 41.4 6.0 44 464-513 146-189 (432)
314 4ep1_A Otcase, ornithine carba 67.7 26 0.00088 36.2 10.1 130 322-473 122-257 (340)
315 3ec7_A Putative dehydrogenase; 67.6 2.8 9.5E-05 42.1 2.9 97 380-495 20-116 (357)
316 2vdc_G Glutamate synthase [NAD 67.6 5.1 0.00017 41.9 5.0 35 382-428 121-155 (456)
317 2zcu_A Uncharacterized oxidore 67.6 4.6 0.00016 37.7 4.3 98 385-498 1-104 (286)
318 2c5a_A GDP-mannose-3', 5'-epim 67.5 20 0.00067 35.5 9.1 99 382-498 28-145 (379)
319 3axb_A Putative oxidoreductase 67.5 4.7 0.00016 40.7 4.6 37 379-426 19-55 (448)
320 2b5w_A Glucose dehydrogenase; 67.4 11 0.00036 37.5 7.1 118 381-523 171-301 (357)
321 2q2v_A Beta-D-hydroxybutyrate 67.2 6.3 0.00022 36.9 5.1 36 380-427 1-37 (255)
322 2uzz_A N-methyl-L-tryptophan o 67.2 4.5 0.00015 39.3 4.3 34 384-429 3-36 (372)
323 3k7m_X 6-hydroxy-L-nicotine ox 67.2 4.9 0.00017 40.1 4.6 31 385-427 3-33 (431)
324 3i3l_A Alkylhalidase CMLS; fla 67.1 6.8 0.00023 42.5 6.0 37 381-429 21-57 (591)
325 2q0l_A TRXR, thioredoxin reduc 67.1 4.8 0.00016 38.1 4.3 33 384-427 2-34 (311)
326 1vdc_A NTR, NADPH dependent th 66.5 4 0.00014 39.0 3.7 33 382-426 7-39 (333)
327 1zk7_A HGII, reductase, mercur 66.5 5.2 0.00018 41.1 4.7 33 383-427 4-36 (467)
328 2dkn_A 3-alpha-hydroxysteroid 66.5 8.1 0.00028 35.2 5.6 69 385-475 3-74 (255)
329 2xve_A Flavin-containing monoo 66.3 4.8 0.00016 41.8 4.5 39 384-428 3-41 (464)
330 2gqw_A Ferredoxin reductase; f 66.3 6.2 0.00021 40.0 5.2 38 383-430 7-44 (408)
331 3enk_A UDP-glucose 4-epimerase 66.2 7.9 0.00027 37.2 5.7 97 383-498 5-129 (341)
332 1hxh_A 3BETA/17BETA-hydroxyste 66.1 5 0.00017 37.7 4.2 76 380-474 3-91 (253)
333 1uzm_A 3-oxoacyl-[acyl-carrier 66.1 17 0.00059 33.9 7.9 77 378-474 10-92 (247)
334 3tzq_B Short-chain type dehydr 66.0 7.1 0.00024 37.2 5.3 77 379-474 7-96 (271)
335 3iwa_A FAD-dependent pyridine 66.0 4.6 0.00016 41.5 4.3 37 383-429 3-39 (472)
336 4eqs_A Coenzyme A disulfide re 65.9 4.6 0.00016 41.6 4.2 34 385-428 2-35 (437)
337 3ruf_A WBGU; rossmann fold, UD 65.8 5 0.00017 38.9 4.3 101 381-498 23-151 (351)
338 1c0p_A D-amino acid oxidase; a 65.7 6.1 0.00021 38.6 4.9 34 383-428 6-39 (363)
339 2oln_A NIKD protein; flavoprot 65.6 5.1 0.00017 39.6 4.3 35 384-430 5-39 (397)
340 3s5w_A L-ornithine 5-monooxyge 65.5 4.1 0.00014 41.4 3.7 40 383-429 30-69 (463)
341 2gv8_A Monooxygenase; FMO, FAD 65.2 5.3 0.00018 40.8 4.5 37 382-428 5-41 (447)
342 3uox_A Otemo; baeyer-villiger 65.2 5.8 0.0002 42.4 5.0 35 382-428 8-42 (545)
343 1dxl_A Dihydrolipoamide dehydr 64.9 6.2 0.00021 40.4 5.0 33 383-427 6-38 (470)
344 2cul_A Glucose-inhibited divis 64.9 5.8 0.0002 36.9 4.4 33 383-427 3-35 (232)
345 1sb8_A WBPP; epimerase, 4-epim 64.8 8.1 0.00028 37.5 5.6 101 381-498 25-153 (352)
346 1tt5_A APPBP1, amyloid protein 64.7 3 0.0001 45.2 2.7 38 379-427 28-65 (531)
347 3dje_A Fructosyl amine: oxygen 64.5 5.8 0.0002 39.9 4.6 37 383-430 6-42 (438)
348 4gqa_A NAD binding oxidoreduct 64.4 5.4 0.00019 40.5 4.4 105 371-487 13-119 (412)
349 2d8a_A PH0655, probable L-thre 64.3 6.6 0.00023 38.8 4.9 131 366-522 153-290 (348)
350 3urh_A Dihydrolipoyl dehydroge 64.2 5.5 0.00019 41.3 4.5 34 383-428 25-58 (491)
351 3uog_A Alcohol dehydrogenase; 64.0 7 0.00024 39.0 5.0 96 371-487 178-279 (363)
352 3i1j_A Oxidoreductase, short c 64.0 17 0.00058 33.4 7.3 37 379-427 10-47 (247)
353 3sxp_A ADP-L-glycero-D-mannohe 63.9 16 0.00054 35.7 7.5 108 379-498 6-138 (362)
354 2x5o_A UDP-N-acetylmuramoylala 63.9 50 0.0017 34.0 11.6 111 380-525 2-112 (439)
355 2r9z_A Glutathione amide reduc 63.5 5.8 0.0002 41.0 4.5 33 383-427 4-36 (463)
356 1wdk_A Fatty oxidation complex 63.5 9.5 0.00032 42.5 6.4 34 382-427 313-346 (715)
357 1vl0_A DTDP-4-dehydrorhamnose 63.4 9.4 0.00032 35.9 5.6 87 381-498 10-113 (292)
358 3h28_A Sulfide-quinone reducta 63.2 6.2 0.00021 40.0 4.6 35 384-428 3-37 (430)
359 2eq6_A Pyruvate dehydrogenase 63.1 5.2 0.00018 41.3 4.0 35 382-428 5-39 (464)
360 3n74_A 3-ketoacyl-(acyl-carrie 63.1 6.3 0.00021 36.8 4.3 77 379-474 5-94 (261)
361 3v76_A Flavoprotein; structura 63.1 5.7 0.00019 41.0 4.3 35 383-429 27-61 (417)
362 3tpf_A Otcase, ornithine carba 62.9 42 0.0014 34.0 10.5 168 316-510 83-274 (307)
363 4ap3_A Steroid monooxygenase; 62.9 5.6 0.00019 42.6 4.3 35 382-428 20-54 (549)
364 2a87_A TRXR, TR, thioredoxin r 62.7 5.3 0.00018 38.6 3.8 34 382-427 13-46 (335)
365 2o7s_A DHQ-SDH PR, bifunctiona 62.7 8.5 0.00029 41.0 5.7 36 380-427 361-396 (523)
366 3sc6_A DTDP-4-dehydrorhamnose 62.7 5.5 0.00019 37.4 3.8 84 384-498 6-106 (287)
367 1fl2_A Alkyl hydroperoxide red 62.5 5.7 0.0002 37.5 3.9 32 384-427 2-33 (310)
368 3ka7_A Oxidoreductase; structu 62.5 7.1 0.00024 38.8 4.7 31 385-427 2-32 (425)
369 3k31_A Enoyl-(acyl-carrier-pro 62.5 11 0.00038 36.5 6.0 81 378-474 25-119 (296)
370 4gcm_A TRXR, thioredoxin reduc 62.5 6.2 0.00021 37.6 4.2 32 384-427 7-38 (312)
371 7mdh_A Protein (malate dehydro 62.3 8.6 0.00029 40.1 5.5 120 383-515 32-172 (375)
372 2qae_A Lipoamide, dihydrolipoy 62.2 6.4 0.00022 40.4 4.5 34 383-428 2-35 (468)
373 3ihm_A Styrene monooxygenase A 62.0 6.3 0.00022 40.2 4.4 32 384-427 23-54 (430)
374 2hqm_A GR, grase, glutathione 62.0 5.8 0.0002 41.1 4.2 34 382-427 10-43 (479)
375 2a8x_A Dihydrolipoyl dehydroge 62.0 5.7 0.0002 40.7 4.1 33 383-427 3-35 (464)
376 1dlj_A UDP-glucose dehydrogena 62.0 4.8 0.00016 41.4 3.5 30 385-427 2-31 (402)
377 1zk4_A R-specific alcohol dehy 61.9 7.4 0.00025 35.8 4.4 38 379-427 2-39 (251)
378 3kd9_A Coenzyme A disulfide re 61.8 6.4 0.00022 40.2 4.4 36 383-428 3-38 (449)
379 2weu_A Tryptophan 5-halogenase 61.7 5.5 0.00019 41.2 3.9 37 384-429 3-39 (511)
380 2e4g_A Tryptophan halogenase; 61.5 6.8 0.00023 41.5 4.6 38 383-429 25-62 (550)
381 3cgb_A Pyridine nucleotide-dis 61.5 6 0.0002 41.0 4.1 64 357-430 7-73 (480)
382 2qcu_A Aerobic glycerol-3-phos 61.5 6.6 0.00023 41.0 4.5 34 383-428 3-36 (501)
383 3nrn_A Uncharacterized protein 61.4 7.6 0.00026 38.8 4.8 31 385-427 2-32 (421)
384 3d6n_B Aspartate carbamoyltran 61.3 99 0.0034 31.1 12.9 125 321-473 85-215 (291)
385 2gn4_A FLAA1 protein, UDP-GLCN 61.3 7.8 0.00027 38.3 4.8 102 378-498 16-142 (344)
386 3sx6_A Sulfide-quinone reducta 61.2 7.2 0.00025 39.7 4.6 36 384-428 5-40 (437)
387 1o5i_A 3-oxoacyl-(acyl carrier 61.2 28 0.00095 32.6 8.4 76 379-474 15-92 (249)
388 3dqp_A Oxidoreductase YLBE; al 61.1 17 0.00059 32.7 6.7 94 385-498 2-106 (219)
389 1rsg_A FMS1 protein; FAD bindi 61.1 2.6 8.9E-05 43.9 1.3 25 381-405 6-30 (516)
390 1pl8_A Human sorbitol dehydrog 61.1 14 0.00047 36.7 6.5 49 366-426 156-204 (356)
391 2qa2_A CABE, polyketide oxygen 61.1 6.7 0.00023 41.2 4.5 34 382-427 11-44 (499)
392 3dfz_A SIRC, precorrin-2 dehyd 61.0 6.5 0.00022 38.0 4.0 36 380-427 28-63 (223)
393 1mo9_A ORF3; nucleotide bindin 61.0 6.6 0.00023 41.3 4.4 35 382-428 42-76 (523)
394 3mz0_A Inositol 2-dehydrogenas 60.9 4.4 0.00015 40.1 2.9 93 384-495 3-95 (344)
395 2yqu_A 2-oxoglutarate dehydrog 60.8 6.8 0.00023 40.1 4.4 33 384-428 2-34 (455)
396 3k30_A Histamine dehydrogenase 60.8 8.4 0.00029 42.1 5.3 34 383-428 391-424 (690)
397 3uuw_A Putative oxidoreductase 60.8 5.2 0.00018 38.8 3.4 91 381-495 4-95 (308)
398 3c4a_A Probable tryptophan hyd 60.7 7.4 0.00025 38.6 4.5 21 385-405 2-22 (381)
399 3cmm_A Ubiquitin-activating en 60.7 6.5 0.00022 45.9 4.6 38 379-427 23-60 (1015)
400 2aqj_A Tryptophan halogenase, 60.6 6.9 0.00024 41.1 4.5 37 383-428 5-41 (538)
401 3tpc_A Short chain alcohol deh 60.5 23 0.00079 33.1 7.7 76 380-474 4-92 (257)
402 3ktd_A Prephenate dehydrogenas 60.5 9.9 0.00034 38.7 5.5 32 384-427 9-40 (341)
403 3ntd_A FAD-dependent pyridine 60.4 9 0.00031 40.1 5.3 36 384-429 2-37 (565)
404 3qj4_A Renalase; FAD/NAD(P)-bi 60.4 4.8 0.00017 39.1 3.0 34 385-427 3-36 (342)
405 3oig_A Enoyl-[acyl-carrier-pro 60.4 15 0.00052 34.3 6.4 80 379-474 3-98 (266)
406 4g6h_A Rotenone-insensitive NA 60.4 4.1 0.00014 43.1 2.7 32 384-427 43-74 (502)
407 3p19_A BFPVVD8, putative blue 60.3 12 0.0004 35.8 5.7 81 378-474 11-98 (266)
408 1w4x_A Phenylacetone monooxyge 60.1 7.7 0.00026 41.0 4.7 35 382-428 15-49 (542)
409 2qa1_A PGAE, polyketide oxygen 60.0 6.9 0.00024 41.1 4.3 24 381-404 9-32 (500)
410 2bry_A NEDD9 interacting prote 59.9 7.8 0.00027 40.7 4.7 36 382-429 91-126 (497)
411 2nvu_B Maltose binding protein 59.8 4.5 0.00015 45.2 3.0 36 382-428 410-445 (805)
412 2wpf_A Trypanothione reductase 59.8 9.1 0.00031 40.0 5.2 32 383-425 7-38 (495)
413 1zmd_A Dihydrolipoyl dehydroge 59.8 7.1 0.00024 40.1 4.3 34 383-428 6-39 (474)
414 1q1r_A Putidaredoxin reductase 59.6 8.8 0.0003 39.3 4.9 37 383-429 4-40 (431)
415 4a5l_A Thioredoxin reductase; 59.5 6.4 0.00022 37.2 3.6 31 385-427 6-36 (314)
416 2jl1_A Triphenylmethane reduct 59.4 10 0.00035 35.4 5.0 99 384-498 1-107 (287)
417 4gde_A UDP-galactopyranose mut 59.3 8.6 0.0003 39.1 4.8 23 383-405 10-32 (513)
418 3euw_A MYO-inositol dehydrogen 59.2 5.4 0.00018 39.4 3.2 90 384-495 5-94 (344)
419 1m6i_A Programmed cell death p 59.2 8.9 0.0003 40.1 5.0 37 382-428 10-46 (493)
420 1ebd_A E3BD, dihydrolipoamide 59.0 6.9 0.00024 40.0 4.1 32 384-427 4-35 (455)
421 2v3a_A Rubredoxin reductase; a 58.9 7.3 0.00025 38.8 4.1 35 383-427 4-38 (384)
422 3oc4_A Oxidoreductase, pyridin 58.9 8.1 0.00028 39.5 4.6 36 384-429 3-38 (452)
423 4hkt_A Inositol 2-dehydrogenas 58.9 7.2 0.00024 38.3 4.0 89 384-495 4-92 (331)
424 3m6i_A L-arabinitol 4-dehydrog 58.8 11 0.00038 37.3 5.4 58 357-426 155-212 (363)
425 1onf_A GR, grase, glutathione 58.7 7.4 0.00025 40.6 4.3 33 384-428 3-35 (500)
426 2bc0_A NADH oxidase; flavoprot 58.5 8.9 0.00031 39.8 4.8 37 383-428 35-71 (490)
427 1zq6_A Otcase, ornithine carba 58.5 73 0.0025 33.1 11.6 116 338-472 145-274 (359)
428 4a2c_A Galactitol-1-phosphate 58.5 25 0.00085 34.3 7.8 55 360-426 139-193 (346)
429 3ihg_A RDME; flavoenzyme, anth 58.4 7 0.00024 40.9 4.0 34 383-428 5-38 (535)
430 3rwb_A TPLDH, pyridoxal 4-dehy 58.3 10 0.00034 35.6 4.7 37 379-427 2-39 (247)
431 1t2a_A GDP-mannose 4,6 dehydra 58.1 23 0.00077 34.7 7.4 101 384-498 25-156 (375)
432 4eye_A Probable oxidoreductase 58.1 10 0.00035 37.5 5.0 97 368-486 145-248 (342)
433 2cdc_A Glucose dehydrogenase g 58.0 27 0.00093 34.7 8.1 33 383-427 181-213 (366)
434 1ek6_A UDP-galactose 4-epimera 58.0 8.6 0.00029 37.0 4.3 103 384-498 3-132 (348)
435 2ydy_A Methionine adenosyltran 57.8 20 0.00068 34.0 6.8 92 383-498 2-110 (315)
436 1qsg_A Enoyl-[acyl-carrier-pro 57.7 12 0.00043 35.1 5.3 78 381-474 7-98 (265)
437 4h7p_A Malate dehydrogenase; s 57.7 16 0.00053 37.5 6.4 115 380-501 21-153 (345)
438 3l8k_A Dihydrolipoyl dehydroge 57.7 8.7 0.0003 39.5 4.6 34 383-428 4-37 (466)
439 3un1_A Probable oxidoreductase 57.7 31 0.0011 32.6 8.1 75 381-474 26-107 (260)
440 3st7_A Capsular polysaccharide 57.6 26 0.00089 34.3 7.8 78 385-497 2-93 (369)
441 1ges_A Glutathione reductase; 57.6 6.6 0.00023 40.3 3.6 33 383-427 4-36 (450)
442 3c4n_A Uncharacterized protein 57.6 9 0.00031 38.5 4.6 34 384-427 37-70 (405)
443 1lvl_A Dihydrolipoamide dehydr 57.5 8.5 0.00029 39.6 4.4 33 383-427 5-37 (458)
444 3oqb_A Oxidoreductase; structu 57.1 7.1 0.00024 39.1 3.7 96 381-495 4-112 (383)
445 1v59_A Dihydrolipoamide dehydr 57.1 9 0.00031 39.3 4.5 34 383-428 5-38 (478)
446 3moi_A Probable dehydrogenase; 57.1 5.4 0.00018 40.4 2.8 89 384-494 3-92 (387)
447 2pyx_A Tryptophan halogenase; 57.0 8.2 0.00028 40.5 4.3 39 383-428 7-52 (526)
448 3o0h_A Glutathione reductase; 57.0 9.3 0.00032 39.5 4.6 33 383-427 26-58 (484)
449 3csu_A Protein (aspartate carb 56.9 81 0.0028 31.9 11.4 129 321-473 94-231 (310)
450 3fpz_A Thiazole biosynthetic e 56.8 9.6 0.00033 37.0 4.5 37 381-427 63-99 (326)
451 3pi7_A NADH oxidoreductase; gr 56.7 35 0.0012 33.6 8.6 93 372-486 155-254 (349)
452 2hcy_A Alcohol dehydrogenase 1 56.7 19 0.00066 35.4 6.7 44 370-426 158-202 (347)
453 3gwf_A Cyclohexanone monooxyge 56.7 7.4 0.00025 41.5 3.9 36 382-428 7-42 (540)
454 4b63_A L-ornithine N5 monooxyg 56.7 6.8 0.00023 41.2 3.6 22 385-406 41-62 (501)
455 3lov_A Protoporphyrinogen oxid 56.5 14 0.00047 37.6 5.7 36 383-428 4-39 (475)
456 2fwm_X 2,3-dihydro-2,3-dihydro 56.4 39 0.0013 31.4 8.5 76 380-474 4-85 (250)
457 1nff_A Putative oxidoreductase 56.4 19 0.00065 33.9 6.4 77 379-474 3-92 (260)
458 3lad_A Dihydrolipoamide dehydr 56.3 11 0.00036 38.8 4.9 33 383-427 3-35 (476)
459 3db2_A Putative NADPH-dependen 56.2 8.5 0.00029 38.2 4.1 91 383-495 5-95 (354)
460 2zb4_A Prostaglandin reductase 56.1 21 0.0007 35.3 6.8 53 364-427 140-195 (357)
461 1gy8_A UDP-galactose 4-epimera 56.0 24 0.00081 34.7 7.2 102 384-497 3-143 (397)
462 3grk_A Enoyl-(acyl-carrier-pro 56.0 12 0.0004 36.3 4.9 37 379-427 27-66 (293)
463 3ko8_A NAD-dependent epimerase 56.0 30 0.001 32.6 7.7 94 385-498 2-113 (312)
464 2gqf_A Hypothetical protein HI 55.9 7.5 0.00026 39.7 3.7 35 383-429 4-38 (401)
465 1rpn_A GDP-mannose 4,6-dehydra 55.9 24 0.00081 33.7 7.0 106 381-498 12-138 (335)
466 2e1m_A L-glutamate oxidase; L- 55.8 11 0.00037 38.9 4.9 35 381-427 42-76 (376)
467 1pvv_A Otcase, ornithine carba 55.7 72 0.0025 32.4 10.8 130 321-471 97-231 (315)
468 1fmc_A 7 alpha-hydroxysteroid 55.7 16 0.00055 33.5 5.6 36 380-427 8-44 (255)
469 4eez_A Alcohol dehydrogenase 1 55.6 27 0.00092 34.1 7.5 48 368-427 150-197 (348)
470 2x6t_A ADP-L-glycero-D-manno-h 55.6 20 0.00067 34.9 6.5 102 381-498 44-163 (357)
471 3op4_A 3-oxoacyl-[acyl-carrier 55.6 10 0.00036 35.5 4.4 76 380-474 6-94 (248)
472 3e1t_A Halogenase; flavoprotei 55.6 7.9 0.00027 40.4 3.9 35 382-428 6-40 (512)
473 1s3e_A Amine oxidase [flavin-c 55.6 10 0.00035 39.3 4.7 35 383-429 4-38 (520)
474 1piw_A Hypothetical zinc-type 55.4 31 0.0011 34.2 8.0 97 368-486 166-267 (360)
475 2i0z_A NAD(FAD)-utilizing dehy 55.2 9.5 0.00033 39.1 4.3 34 384-429 27-60 (447)
476 3g3e_A D-amino-acid oxidase; F 55.1 9.9 0.00034 36.9 4.2 36 385-427 2-38 (351)
477 4fk1_A Putative thioredoxin re 55.0 9.6 0.00033 36.4 4.1 33 383-427 6-38 (304)
478 1ojt_A Surface protein; redox- 54.9 9.9 0.00034 39.3 4.4 34 383-428 6-39 (482)
479 3rkr_A Short chain oxidoreduct 54.9 29 0.001 32.5 7.4 75 380-473 26-116 (262)
480 2vvm_A Monoamine oxidase N; FA 54.7 11 0.00037 38.6 4.6 21 384-404 40-60 (495)
481 3ak4_A NADH-dependent quinucli 54.6 17 0.00058 34.0 5.7 82 380-474 9-97 (263)
482 4gbj_A 6-phosphogluconate dehy 54.6 13 0.00045 36.6 5.1 31 384-426 6-36 (297)
483 2wsb_A Galactitol dehydrogenas 54.6 13 0.00043 34.3 4.7 36 380-427 8-44 (254)
484 3nyc_A D-arginine dehydrogenas 54.4 7.2 0.00025 37.7 3.1 33 383-428 9-41 (381)
485 3gaf_A 7-alpha-hydroxysteroid 54.2 24 0.00081 33.2 6.6 37 379-427 8-45 (256)
486 1rp0_A ARA6, thiazole biosynth 54.2 9.9 0.00034 36.5 4.1 37 382-429 38-74 (284)
487 3m1a_A Putative dehydrogenase; 54.2 11 0.00038 35.6 4.3 75 381-474 3-90 (281)
488 3l9w_A Glutathione-regulated p 54.2 7.3 0.00025 40.6 3.3 98 384-499 5-103 (413)
489 3atr_A Conserved archaeal prot 54.1 5.8 0.0002 40.5 2.5 34 383-428 6-39 (453)
490 1xdi_A RV3303C-LPDA; reductase 54.1 9.1 0.00031 39.8 4.0 36 384-428 3-38 (499)
491 2bi7_A UDP-galactopyranose mut 54.1 11 0.00036 38.2 4.4 34 382-427 2-35 (384)
492 2cdu_A NADPH oxidase; flavoenz 54.0 11 0.00036 38.6 4.4 34 385-428 2-35 (452)
493 3r1i_A Short-chain type dehydr 54.0 33 0.0011 32.8 7.7 77 379-474 28-120 (276)
494 3f1l_A Uncharacterized oxidore 54.0 30 0.001 32.4 7.2 37 379-427 8-45 (252)
495 1o94_A Tmadh, trimethylamine d 53.9 11 0.00037 41.7 4.8 34 383-428 389-422 (729)
496 1nhp_A NADH peroxidase; oxidor 53.8 11 0.00037 38.5 4.5 35 385-429 2-36 (447)
497 1xhc_A NADH oxidase /nitrite r 53.7 7.6 0.00026 38.9 3.3 35 383-430 8-42 (367)
498 1rkx_A CDP-glucose-4,6-dehydra 53.7 20 0.00069 34.7 6.2 102 381-498 7-132 (357)
499 1wly_A CAAR, 2-haloacrylate re 53.7 21 0.00073 34.8 6.4 101 366-487 129-236 (333)
500 1mv8_A GMD, GDP-mannose 6-dehy 53.6 11 0.00036 39.1 4.4 31 385-427 2-32 (436)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=6.4e-175 Score=1395.78 Aligned_cols=439 Identities=56% Similarity=0.972 Sum_probs=433.5
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhHHHHHHHHhh
Q 009138 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (542)
Q Consensus 102 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ll~~ 181 (542)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+|||||+++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCCCccccchh
Q 009138 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (542)
Q Consensus 182 ~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (542)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH
Q 009138 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (542)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA 341 (542)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeE
Q 009138 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (542)
Q Consensus 342 f~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i 421 (542)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999884 99999999999
Q ss_pred EEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 422 ~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||||||++||++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 59999999999877788999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEEeCCCCCCccc-CCEEEcccCC
Q 009138 502 SQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQV 542 (542)
Q Consensus 502 ~~aEct~edA~~wt~GraIfASGspf~pv~~-~g~~~~pgQ~ 542 (542)
+++||+||||++||+|+|||||||||+||+| ||++++||||
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~ 440 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQG 440 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEEC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccc
Confidence 9999999999999999999999999999999 9999999997
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.5e-174 Score=1396.29 Aligned_cols=440 Identities=53% Similarity=0.960 Sum_probs=433.8
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhHHHHHHHHhh
Q 009138 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (542)
Q Consensus 102 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ll~~ 181 (542)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+|||||+++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCCCccccchh
Q 009138 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (542)
Q Consensus 182 ~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (542)
|++|+|||+||||||++|++||+|||+|+|+|||++|+++|+++|+|||.++|+|||||||||||||||+|++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH
Q 009138 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (542)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA 341 (542)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeE
Q 009138 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (542)
Q Consensus 342 f~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i 421 (542)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+++|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 599999999999
Q ss_pred EEEcccccccCCCccCCchhchhhccccCCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 422 ~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~--~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEEeCCCCCCccc-CCEEEcccCC
Q 009138 500 PTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQV 542 (542)
Q Consensus 500 Pt~~aEct~edA~~wt~GraIfASGspf~pv~~-~g~~~~pgQ~ 542 (542)
||+++||+||||++||+|+|||||||||+||+| ||++++||||
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~ 445 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQG 445 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEEC
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceeccccc
Confidence 999999999999999999999999999999999 9999999997
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.4e-174 Score=1398.82 Aligned_cols=443 Identities=49% Similarity=0.879 Sum_probs=436.1
Q ss_pred ccccccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhHHHHHH
Q 009138 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (542)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ 177 (542)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 34457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCceEEEEecCcceeccCCCCCCc
Q 009138 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (542)
Q Consensus 178 ll~~~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 255 (542)
|+++|++|+|||+||||||++|++||+|||+|+|+|||++|+ ++++++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeec
Q 009138 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFED 335 (542)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfED 335 (542)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChh
Q 009138 336 FANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLE 415 (542)
Q Consensus 336 f~~~nAf~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e 415 (542)
|++||||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 599999
Q ss_pred hccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 416 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 416 eAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++||++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 59999999999877788999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCcccCCEEEcccCC
Q 009138 496 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQV 542 (542)
Q Consensus 496 aLSNPt~~aEct~edA~~wt~GraIfASGspf~pv~~~g~~~~pgQ~ 542 (542)
||||||+++||+||||++||+|+|||||||||+||+|||++++||||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~ 477 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQG 477 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEEC
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccc
Confidence 99999999999999999999999999999999999999999999997
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1e-98 Score=794.90 Aligned_cols=296 Identities=31% Similarity=0.443 Sum_probs=266.2
Q ss_pred ccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCC-Cccccchhhh
Q 009138 185 ELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGIPVGKL 263 (542)
Q Consensus 185 e~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~iGKl 263 (542)
+.||++||||||++|++|+ +|++++++++.+| ++|||||||||||||||+|+ +||||||||+
T Consensus 59 ~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGKl 121 (487)
T 3nv9_A 59 NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGKA 121 (487)
T ss_dssp GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHHH
T ss_pred HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhHH
Confidence 5599999999999999986 4567777665555 69999999999999999999 5899999999
Q ss_pred hhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHH
Q 009138 264 SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD 343 (542)
Q Consensus 264 ~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~ 343 (542)
+|||+||||| |||||||+||+| +++|| ++ +.|||+++.++||. ||||||++||||+
T Consensus 122 ~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------de-fve~v~~~~P~fG~---InlEDf~ap~af~ 177 (487)
T 3nv9_A 122 LLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DA-VIEFVQRIQHTFGA---INLEDISQPNCYK 177 (487)
T ss_dssp HHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HH-HHHHHHHHGGGCSE---EEECSCCTTHHHH
T ss_pred HHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HH-HHHHHHHhCCCCCe---ecHhhcCCchHHH
Confidence 9999999999 999999999754 45664 34 33567777777766 9999999999999
Q ss_pred HHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeE
Q 009138 344 LLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (542)
Q Consensus 344 lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i 421 (542)
||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++ ++|
T Consensus 178 il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~i 248 (487)
T 3nv9_A 178 ILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KKI 248 (487)
T ss_dssp HHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GGE
T ss_pred HHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----ccE
Confidence 9999998 899999999999999999999999999999999999999999999999999975 49876 899
Q ss_pred EEEcccccccCCCccCC-----chhchhhccccC--CCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHcCCCCcE
Q 009138 422 WLVDSKGLIVSSRLESL-----QHFKKPWAHEHE--PVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPI 493 (542)
Q Consensus 422 ~lvDskGLi~~~R~~~l-----~~~k~~fA~~~~--~~~~L~eaV~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erPI 493 (542)
||||++|||+++|.+ | .++|.+||++.. ..++|+|||++ +|||||+|++ +|+||||||++|+ +|||
T Consensus 249 ~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PI 322 (487)
T 3nv9_A 249 VMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKPI 322 (487)
T ss_dssp EEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSCE
T ss_pred EEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCCE
Confidence 999999999999954 6 346778888642 46899999998 7999999976 7999999999997 8999
Q ss_pred EEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCcccCCEEEccc
Q 009138 494 IFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPG 540 (542)
Q Consensus 494 IFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv~~~g~~~~pg 540 (542)
|||||||| +||+||||++ +|+|||||||++.|+|.||...|||
T Consensus 323 IFaLSNPt--pEi~pe~A~~--~G~aIvATGrsd~PnQ~NN~liFPG 365 (487)
T 3nv9_A 323 VFCCANPV--PEIYPYEAKE--AGAYIVATGRGDFPNQVNNSVGFPG 365 (487)
T ss_dssp EEECCSSS--CSSCHHHHHH--TTCSEEEESCTTSSSBCCGGGTHHH
T ss_pred EEECCCCC--ccCCHHHHHH--hCCEEEEECCCCCcccCcceeEcch
Confidence 99999999 7999999998 5999999999999999999999997
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.4e-93 Score=744.61 Aligned_cols=297 Identities=29% Similarity=0.430 Sum_probs=271.6
Q ss_pred HHHHHHhhchhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCC
Q 009138 174 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 253 (542)
Q Consensus 174 LFY~ll~~~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~ 253 (542)
+++++.+++. |+|||+||||||++|++|+ ++| ++++ +||.++++|+|||||+|||||||+|+
T Consensus 24 ~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEecccCCH-HHCeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCccc
Confidence 3445566665 5589999999999999987 455 4444 79999999999999999999999999
Q ss_pred C-ccccchhhhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-cee
Q 009138 254 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 331 (542)
Q Consensus 254 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~-~lI 331 (542)
+ |||||+||+.|||+||||| |+|||||+|| +||||++|+..| |. ..|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEe
Confidence 8 9999999999999999999 9999999996 799999999988 77 889
Q ss_pred eeecCCCccHHHHHHHHcCC--CceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 332 QFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 332 qfEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
|||||++||||++|+|||++ ||||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 135 ~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~---- 210 (398)
T 2a9f_A 135 NLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA---- 210 (398)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH----
T ss_pred ccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc----
Confidence 99999999999999999984 999999999999999999999999999999999999999999999999999874
Q ss_pred cCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA 486 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma 486 (542)
|+ ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|++|+
T Consensus 211 -Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma 280 (398)
T 2a9f_A 211 -GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA 280 (398)
T ss_dssp -TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC
T ss_pred -CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC
Confidence 64 799999999999999933599999999997542 4689999998 899999999 8999999999998
Q ss_pred cCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCcccCCEEEccc
Q 009138 487 SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPG 540 (542)
Q Consensus 487 ~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv~~~g~~~~pg 540 (542)
++|||||||||| |||+||||++| |+||||||+++.|+|.||...|||
T Consensus 281 ---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atGrs~~p~Q~NN~~~FPg 327 (398)
T 2a9f_A 281 ---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTGRSDFPNQINNVLAFPG 327 (398)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEESCTTSSSBCCGGGTHHH
T ss_pred ---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeCCCCCCCcCCceeEcch
Confidence 899999999999 89999999999 999999999999999999999997
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=6.1e-90 Score=717.60 Aligned_cols=297 Identities=28% Similarity=0.445 Sum_probs=276.1
Q ss_pred HHHHHHhhchhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCC
Q 009138 174 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 253 (542)
Q Consensus 174 LFY~ll~~~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~ 253 (542)
.++++.+++.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||+|||||||+|+
T Consensus 28 ~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G~ 89 (388)
T 1vl6_A 28 TALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIGP 89 (388)
T ss_dssp EECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCCH
T ss_pred EEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCcccc
Confidence 456677788766 89999999999999987 5665444 79999999999999999999999999
Q ss_pred C-ccccchhhhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-cee
Q 009138 254 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 331 (542)
Q Consensus 254 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~-~lI 331 (542)
+ |||||+||+.|||+||||| |+|||||+|| +||||++|++.| |. ..|
T Consensus 90 ~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~i 138 (388)
T 1vl6_A 90 YGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGGI 138 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceEe
Confidence 8 9999999999999999999 9999999996 799999999988 77 889
Q ss_pred eeecCCCccHHHHHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 332 QFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 332 qfEDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
|||||++||||++|+|||+ +||||||||||||+|++||+++|++++|++|+|+||||+|||+||+++|++++..
T Consensus 139 ~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~---- 214 (388)
T 1vl6_A 139 NLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL---- 214 (388)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH----
T ss_pred CHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC----
Confidence 9999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred cCCChhhccCeEEEEcccccccCCCccC-CchhchhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM 485 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~-l~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M 485 (542)
| .++||++|++|||+++|.+. |+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|++|
T Consensus 215 -G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~M 284 (388)
T 1vl6_A 215 -G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKKM 284 (388)
T ss_dssp -T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTTS
T ss_pred -C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHhc
Confidence 6 37999999999999999643 99999999987542 4689999998 899999999 799999999999
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCcccCCEEEccc
Q 009138 486 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPG 540 (542)
Q Consensus 486 a~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv~~~g~~~~pg 540 (542)
+ ++||||+||||| |||+||||++| |+||||||+++.|+|.||...|||
T Consensus 285 a---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atGr~~~p~Q~NN~~~FPg 332 (388)
T 1vl6_A 285 S---RKPVIFALANPV--PEIDPELAREA--GAFIVATGRSDHPNQVNNLLAFPG 332 (388)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEESCTTSSSBCCGGGTHHH
T ss_pred C---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeCCCCCCCcCCceeEcch
Confidence 8 799999999999 89999999999 999999999999999999999997
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=7.3e-64 Score=529.14 Aligned_cols=296 Identities=31% Similarity=0.497 Sum_probs=264.6
Q ss_pred HHHHhhchhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCcceeccCCCCCC-
Q 009138 176 YKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH- 254 (542)
Q Consensus 176 Y~ll~~~~ee~lpivYTPtVg~aC~~~s~i~r~p~GlYis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~- 254 (542)
+++.+++. |+|||+||||||++|++|++ |+++++ +||.++|+|+|||||+|||||||+|.+
T Consensus 24 ~~~~~~~~-~~l~~~YtP~v~~~c~~~~~-------------~~~~~~----~~~~~~~~v~vvtdgt~ilGlG~iG~hS 85 (439)
T 2dvm_A 24 PKVSLESR-EELTLAYTPGVAEPCKEIAR-------------DPGKVY----EYTSKGNLVAVVSDGSRILGLGNIGPLA 85 (439)
T ss_dssp ESSCCCSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHH----HHSSGGGEEEEEECSTTBTTTBCCCHHH
T ss_pred EeeccCCH-HHCeeEECchhHHHHHHHHH-------------CHHHHH----hhcccCcEEEEEECCCeEecccceeccc
Confidence 34555665 55899999999999999972 667776 489999999999999999999999997
Q ss_pred ccccchhhhhhHhhhCCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-ceeee
Q 009138 255 GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQF 333 (542)
Q Consensus 255 GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~-~lIqf 333 (542)
++|+|+||++||++||||| ++|++||+.. +|||+++|+..+ |+ ..|||
T Consensus 86 ~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~Ginv 134 (439)
T 2dvm_A 86 GLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGGINL 134 (439)
T ss_dssp HHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSEEEE
T ss_pred cCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcEEEE
Confidence 7999999999999999999 9999999921 578888888765 44 56999
Q ss_pred ecCCCccHHHHHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcC
Q 009138 334 EDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (542)
Q Consensus 334 EDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G 411 (542)
|||..|+||++|++|++ ++||||||+||||++.++|+++|++..|++|+++|+||+|||+||.+|+.+|.. .|
T Consensus 135 ED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~-----~G 209 (439)
T 2dvm_A 135 EDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE-----AG 209 (439)
T ss_dssp CSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----TT
T ss_pred EeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----cC
Confidence 99999999999999997 699999999999999999999999999999999999999999999999999976 37
Q ss_pred CChhhccCeEEEEc----ccccccCCCccC---CchhchhhccccC---CCCCHHHHHhccCCcEEEEccCCC-CCCCHH
Q 009138 412 MPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTKE 480 (542)
Q Consensus 412 ~s~eeAr~~i~lvD----skGLi~~~R~~~---l~~~k~~fA~~~~---~~~~L~eaV~~vkPtvLIG~S~~~-g~Ftee 480 (542)
++ +++||++| ++||+++. +. |.++|++|++... ...+|.|+++. +|+|||+|+.+ |.|+++
T Consensus 210 ~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e 281 (439)
T 2dvm_A 210 VK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQ 281 (439)
T ss_dssp CC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHH
T ss_pred CC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCChH
Confidence 65 27899999 99999887 24 7888889987533 25689999987 89999999985 899999
Q ss_pred HHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCcccCCEEEccc
Q 009138 481 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPG 540 (542)
Q Consensus 481 vv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv~~~g~~~~pg 540 (542)
+++.|+ ++||||+|+||+ +||++++|++| |++++|||+++.|.|.|+...|||
T Consensus 282 ~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG~~ml~~Q~nn~~~FPG 334 (439)
T 2dvm_A 282 WIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATGRSDYPNQINNLLGFPG 334 (439)
T ss_dssp HHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBSCSSSSSBCCGGGTHHH
T ss_pred HHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCCCchhHHHHHHHhcccC
Confidence 999997 899999999999 89999999998 889999999999999999999997
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.00 E-value=1.3e-09 Score=115.78 Aligned_cols=130 Identities=18% Similarity=0.205 Sum_probs=105.5
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccC
Q 009138 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (542)
Q Consensus 350 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~ 419 (542)
..+|+| +|++.||+.++++|++. .++..|.+.+++|+|.|..|.++|+.+.. .|.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka-----~Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRG-----FGA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHH-----CCC-------
Confidence 589999 89999999999999964 56999999999999999999999999864 363
Q ss_pred eEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009138 420 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 420 ~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 498 (542)
+++++|.+. .+...|. ..-...+|.|+++. +|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888742 1111121 11223589999997 99999988888899999999997 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 009138 499 NPTSQSECTAEEAYT 513 (542)
Q Consensus 499 NPt~~aEct~edA~~ 513 (542)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987643
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.99 E-value=4.1e-09 Score=111.89 Aligned_cols=168 Identities=12% Similarity=0.203 Sum_probs=124.7
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHHH-------H--------------HHHc-------CCCcee-
Q 009138 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDL-------L--------------EKYG-------TTHLVF- 355 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~l-------L--------------~ryr-------~~~~~F- 355 (542)
.+-|||...++..+.+ ..++|+.+| |-+..=...+ + .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 4667888878776642 345676665 4443322222 1 3443 269999
Q ss_pred ---------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 356 ---------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 356 ---------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
+|+++||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++++|.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 899999999999999765 6999999999999999999999998854 364 5888886
Q ss_pred cccccCCCccCCchhchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 009138 427 KGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSE 505 (542)
Q Consensus 427 kGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aE 505 (542)
+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 431 111121 11123579999996 99999998888999999999997 789999999997 78
Q ss_pred CCHHHH
Q 009138 506 CTAEEA 511 (542)
Q Consensus 506 ct~edA 511 (542)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887654
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.60 E-value=2.5e-08 Score=103.86 Aligned_cols=245 Identities=19% Similarity=0.236 Sum_probs=141.0
Q ss_pred cchHHHHHhcCCCCCceEEEEecCcceeccCCCCCC--ccccchhhhhhHhhhCCCCCCCeeeEEeecCCCccccccCcc
Q 009138 219 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEF 296 (542)
Q Consensus 219 ~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~ 296 (542)
+..++++.+ .+.+|+|.++++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+ |
T Consensus 27 P~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p- 82 (401)
T 1x13_A 27 PKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P- 82 (401)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C-
T ss_pred HHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C-
Confidence 445555554 34689999999999999999875 8888888 66776 1 56776642 1
Q ss_pred cccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeecCC-CccHHHHHHHHcCCCceee-cCC------c----chHH
Q 009138 297 YIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFA-NHNAFDLLEKYGTTHLVFN-DDI------Q----GTAS 364 (542)
Q Consensus 297 YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~-~~nAf~lL~ryr~~~~~FN-DDi------Q----GTaa 364 (542)
..+.++.+++ ...+|-+=..+ ++.+++-|.+ ..+.+|+ |.+ | .+..
T Consensus 83 -----------------~~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~~ 140 (401)
T 1x13_A 83 -----------------LDDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSSM 140 (401)
T ss_dssp -----------------CHHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHHH
T ss_pred -----------------CHHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHHH
Confidence 1233333322 01122221211 2333333322 4677773 222 2 4555
Q ss_pred HHHHHHHHHHHHh----CC----------CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 365 VVLAGLISAMKFL----GG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 365 VvLAgll~Alr~~----g~----------~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
..+|| .+|++.. ++ .+...+|+|+|+|.+|.++++++.. .|. +++++|++.-.
T Consensus 141 a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~~ 207 (401)
T 1x13_A 141 ANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPEV 207 (401)
T ss_dssp HHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGGG
T ss_pred HHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHHH
Confidence 56665 3344332 22 2668999999999999999998754 362 58899986432
Q ss_pred cCCCccCCch------------hchhhccccCC------CCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHc
Q 009138 431 VSSRLESLQH------------FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMAS 487 (542)
Q Consensus 431 ~~~R~~~l~~------------~k~~fA~~~~~------~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~ 487 (542)
.... +.+.. .+..|++...+ ..+|.+.++. .|++|++...+ .++++++++.|.
T Consensus 208 ~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk- 283 (401)
T 1x13_A 208 KEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK- 283 (401)
T ss_dssp HHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC-
T ss_pred HHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC-
Confidence 1110 00100 00012111000 1147788886 99999995433 679999999997
Q ss_pred CCCCcEEEEcCCCC-CCCCCC-HHH-HhcccCCcEEEEeCCCCCCcc
Q 009138 488 LNEKPIIFSLSNPT-SQSECT-AEE-AYTWSQGRAIFASGSPFDPFE 531 (542)
Q Consensus 488 ~~erPIIFaLSNPt-~~aEct-~ed-A~~wt~GraIfASGspf~pv~ 531 (542)
+..+|+-+|+|. ...|.+ +.+ .+. .+|-.|+ |++..|.+
T Consensus 284 --~g~vIVdva~~~Gg~v~~~~~~~p~~~-~~gv~i~--g~~~~p~~ 325 (401)
T 1x13_A 284 --AGSVIVDLAAQNGGNCEYTVPGEIFTT-ENGVKVI--GYTDLPGR 325 (401)
T ss_dssp --TTCEEEETTGGGTCSBTTCCTTSEEEC-TTSCEEE--CCSCTGGG
T ss_pred --CCcEEEEEcCCCCCCcCcccCCCceEE-ECCEEEE--eeCCCccc
Confidence 688999999873 234443 333 122 3565555 55444443
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.07 E-value=9e-06 Score=87.56 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=101.2
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccC
Q 009138 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (542)
Q Consensus 350 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~ 419 (542)
-.+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 379999 7899999999999886 788999999999999999999999888865 363
Q ss_pred eEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 420 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 420 ~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+++++|.+.. + ..... ...-...++.++++. .|+++-.++...+++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~Aa----~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQAT----MEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHHH----HTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHHH----HhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 11111 111123467777765 89999988888899999999996 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 009138 500 PTSQSECTAEEAYTW 514 (542)
Q Consensus 500 Pt~~aEct~edA~~w 514 (542)
+. .|+..++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888766554
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.06 E-value=1.9e-05 Score=84.57 Aligned_cols=127 Identities=17% Similarity=0.200 Sum_probs=97.3
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccC
Q 009138 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (542)
Q Consensus 350 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~ 419 (542)
-.+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+.. .|+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lra-----fGa------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAG-----AGA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6778999999888885 567999999999999999999999998854 364
Q ss_pred eEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009138 420 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 420 ~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 498 (542)
+++++|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888875321 111111 11123579999997 99999988878899999999997 788998888
Q ss_pred CCCCCCCCCHHH
Q 009138 499 NPTSQSECTAEE 510 (542)
Q Consensus 499 NPt~~aEct~ed 510 (542)
+.. .|+..+.
T Consensus 335 Rgd--vEID~~a 344 (464)
T 3n58_A 335 HFD--NEIQVAA 344 (464)
T ss_dssp SST--TTBTCGG
T ss_pred CCC--cccCHHH
Confidence 876 5555443
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.48 E-value=0.0013 Score=67.73 Aligned_cols=225 Identities=15% Similarity=0.132 Sum_probs=121.6
Q ss_pred cchHHHHHhcCCCCCceEEEEecCcceeccCCCCCC--ccccchhhhhhHhhhCCCCCCCeeeEEeecCCC-----cccc
Q 009138 219 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEKL 291 (542)
Q Consensus 219 ~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----ne~L 291 (542)
+..+.++.+ .+.+|+|.++++...|+.|.... |..|..++..++ ++.| |+|.+.+- .++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 344555544 35789999999999999998764 778877766665 3333 56665432 1111
Q ss_pred ---c-cCcccccccccccchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHHHHHHHcCCCceeecCCcchHHHHH
Q 009138 292 ---L-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVL 367 (542)
Q Consensus 292 ---L-~Dp~YlGlr~~R~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaVvL 367 (542)
| ..-.+++.-+.- ++ .+.++++.++ |- .++.+|-+....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~-gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TN---RPVVEALTKR-KI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GC---HHHHHHHHHT-TC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CC---HHHHHHHHHC-CC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112233332221 11 1122222221 12 1233322221100 00112222 11122
Q ss_pred H---HHHHHHHHhCC----------CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCC
Q 009138 368 A---GLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (542)
Q Consensus 368 A---gll~Alr~~g~----------~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R 434 (542)
| +++.+.+..++ .+...+++|+|+|.+|.++++++.. .|. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 55666666554 6789999999999999999988754 363 4889997532 1
Q ss_pred ccCCchhch-----------------hhccccC------CCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHH
Q 009138 435 LESLQHFKK-----------------PWAHEHE------PVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMA 486 (542)
Q Consensus 435 ~~~l~~~k~-----------------~fA~~~~------~~~~L~eaV~~vkPtvLIG~S~~-----~g~Fteevv~~Ma 486 (542)
.+.+...-. .|++... ....|.+.++. .|++|.++.. +.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 110100000 1111100 00127788875 9999998832 3468999999996
Q ss_pred cCCCCcEEEEcCCC
Q 009138 487 SLNEKPIIFSLSNP 500 (542)
Q Consensus 487 ~~~erPIIFaLSNP 500 (542)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67899999954
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.48 E-value=0.00014 Score=76.78 Aligned_cols=110 Identities=16% Similarity=0.196 Sum_probs=72.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc--------------hhchhh
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ--------------HFKKPW 445 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~--------------~~k~~f 445 (542)
.+...|++|+|+|.+|.++|+++.. .|. +++++|.+.-......+ +. +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~-----lGa-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARR-----LGA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 4678999999999999999998864 363 68999987532111100 10 001124
Q ss_pred ccccCC------CCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 009138 446 AHEHEP------VKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECT 507 (542)
Q Consensus 446 A~~~~~------~~~L~eaV~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct 507 (542)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +.++|+-+|- |-...|.+
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2479999997 9999998533 4589999999997 7999999995 33345554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.38 E-value=0.0002 Score=75.03 Aligned_cols=104 Identities=21% Similarity=0.174 Sum_probs=67.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCcc------CCc---hhchhhccc---
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE------SLQ---HFKKPWAHE--- 448 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~------~l~---~~k~~fA~~--- 448 (542)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .++ .-...|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 63 68999987421110000 000 000112211
Q ss_pred ---cCCCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 449 ---HEPVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 449 ---~~~~~~L~eaV~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
.....+|.++++. .|++|++... +.+||+|+++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 0112468899987 9999997533 3579999999997 789999998543
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.03 E-value=0.0042 Score=61.27 Aligned_cols=133 Identities=14% Similarity=0.147 Sum_probs=88.8
Q ss_pred CCceeecC------CcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEE
Q 009138 351 THLVFNDD------IQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV 424 (542)
Q Consensus 351 ~~~~FNDD------iQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lv 424 (542)
.+.++|=. .-.+-+|+=.++..++...|..|.+.+++|+|+|..|..+|+.+.. .|. +++.+
T Consensus 117 gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~ 184 (293)
T 3d4o_A 117 NRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVG 184 (293)
T ss_dssp TCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEE
T ss_pred CCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEE
Confidence 56666633 2245566666666667778889999999999999999999998854 353 68888
Q ss_pred cccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCC
Q 009138 425 DSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQ 503 (542)
Q Consensus 425 DskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt~~ 503 (542)
|+.. .+ +...+..-++. -...+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+| +|.
T Consensus 185 dr~~----~~---~~~~~~~g~~~-~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~-- 248 (293)
T 3d4o_A 185 ARES----DL---LARIAEMGMEP-FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG-- 248 (293)
T ss_dssp ESSH----HH---HHHHHHTTSEE-EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC--
T ss_pred ECCH----HH---HHHHHHCCCee-cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC--
Confidence 8742 11 11111000110 012468888876 999997654 5799999999886 577888888 554
Q ss_pred CCCCHHHHh
Q 009138 504 SECTAEEAY 512 (542)
Q Consensus 504 aEct~edA~ 512 (542)
++..+.|.
T Consensus 249 -~~~~~~a~ 256 (293)
T 3d4o_A 249 -GTDFRYAE 256 (293)
T ss_dssp -SBCHHHHH
T ss_pred -CCCHHHHH
Confidence 55565554
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.92 E-value=0.014 Score=61.95 Aligned_cols=187 Identities=19% Similarity=0.176 Sum_probs=130.2
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCc-cHHH-HHHHHc---CC--Ccee----------ecCCcchHHHHH
Q 009138 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANH-NAFD-LLEKYG---TT--HLVF----------NDDIQGTASVVL 367 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~-nAf~-lL~ryr---~~--~~~F----------NDDiQGTaaVvL 367 (542)
.+-.|-..|...|++++.+.-||+.-|-=+|+... .-.. +.+.|+ .. -.++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 34556677889999999999999888888998763 2222 445663 21 1122 334456888888
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhc-hhhc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPWA 446 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k-~~fA 446 (542)
.++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +-+-+.|++|-|+...+ |+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~G--lD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPDG--LDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTTC--CCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCCC--CCHHHHHHHH
Confidence 89999999999999999999999999999999999664 53 34579999999997643 43221 1111
Q ss_pred cccC-------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009138 447 HEHE-------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (542)
Q Consensus 447 ~~~~-------~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 513 (542)
.... ..-+-.+ +-.++.||||=+... +.+|++-++.+ .-.+|.--+| |++ +| +++.++
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~t-~e--A~~iL~ 338 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPTT-ID--ATKILN 338 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCCC-HH--HHHHHH
Confidence 1111 1112234 345689999988775 79999988887 5789998888 653 33 345554
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.78 E-value=0.065 Score=57.37 Aligned_cols=182 Identities=15% Similarity=0.105 Sum_probs=125.6
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH-----HHHHHHHcCC-Ccee----------ecCCcchHHHHHH
Q 009138 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA-----FDLLEKYGTT-HLVF----------NDDIQGTASVVLA 368 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA-----f~lL~ryr~~-~~~F----------NDDiQGTaaVvLA 368 (542)
.+-.|-..|...||..+.+..||+.=|--.|+..--. +...++++.. -.|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 4566778899999999999999999999999975322 2333444432 2233 2333458877888
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc
Q 009138 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE 448 (542)
Q Consensus 369 gll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~ 448 (542)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|+... .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999999763 63 4566789999998764 354433211110
Q ss_pred --cCCCCCHHHH-------------HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009138 449 --HEPVKELVDA-------------VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (542)
Q Consensus 449 --~~~~~~L~ea-------------V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 501 (542)
......+.+. +-.++.|||+=+..+ +.+|++-++.+.+. .-.+|.--+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0001112111 234679999988774 69999999999632 2357877778 65
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.71 E-value=0.021 Score=60.44 Aligned_cols=186 Identities=15% Similarity=0.140 Sum_probs=127.9
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH--HHHHHHHcC---C--Ccee----------ecCCcchHHHHH
Q 009138 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---T--HLVF----------NDDIQGTASVVL 367 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr~---~--~~~F----------NDDiQGTaaVvL 367 (542)
.+-.|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3445667788999999999999999999999987421 124555621 1 1122 233345777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEcccccccCCCccCCchhc-hhh
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFK-KPW 445 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDskGLi~~~R~~~l~~~k-~~f 445 (542)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++|-|+.... ++..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 7888889999999999999999999999999998865 353 566 9999999998643 33221 111
Q ss_pred ccccCCCC----CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009138 446 AHEHEPVK----ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (542)
Q Consensus 446 A~~~~~~~----~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 513 (542)
......+. +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111010 0012 34578999998875 679999998887 4679999998 653 44 445554
No 20
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.42 E-value=0.11 Score=55.59 Aligned_cols=189 Identities=17% Similarity=0.170 Sum_probs=127.9
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHH--HHHHHHc---CCCc-ee----------ecCCcchHHHHHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TTHL-VF----------NDDIQGTASVVLAG 369 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf--~lL~ryr---~~~~-~F----------NDDiQGTaaVvLAg 369 (542)
+-.|...|...||..+.+.+||..=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-+
T Consensus 146 s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~ 225 (456)
T 3r3j_A 146 SENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYF 225 (456)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHH
Confidence 4556777778899999888899988999999764211 1344554 2221 11 12223577777778
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-----
Q 009138 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----- 444 (542)
Q Consensus 370 ll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~----- 444 (542)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|+... .|+..+..
T Consensus 226 ~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~~ 292 (456)
T 3r3j_A 226 AENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMDI 292 (456)
T ss_dssp HHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHHH
Confidence 888889899999999999999999999999998764 53 3345899999998764 24322211
Q ss_pred ----------hccccCCCC--CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHH
Q 009138 445 ----------WAHEHEPVK--ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEA 511 (542)
Q Consensus 445 ----------fA~~~~~~~--~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA 511 (542)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-+ +.-+||.--+| |++ +| +++.
T Consensus 293 k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~i 366 (456)
T 3r3j_A 293 KNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALHK 366 (456)
T ss_dssp HHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHHH
T ss_pred HHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHHH
Confidence 211000000 0011 33467999998877 67999999999843 24689999999 653 55 5666
Q ss_pred hc
Q 009138 512 YT 513 (542)
Q Consensus 512 ~~ 513 (542)
+.
T Consensus 367 L~ 368 (456)
T 3r3j_A 367 LK 368 (456)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 21
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.38 E-value=0.0067 Score=61.84 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=79.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~ 439 (542)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888899999999999999999999999 5799999988652 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 440 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468999997 99999999999999999985 56788877764
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.34 E-value=0.0082 Score=60.74 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh
Q 009138 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 441 (542)
Q Consensus 363 aaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~ 441 (542)
.-++-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3577888999999999999999999999987 899999998652 53 47777653
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCC---CCCCCHHHHhc
Q 009138 442 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTS---QSECTAEEAYT 513 (542)
Q Consensus 442 k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt~---~aEct~edA~~ 513 (542)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.. --.+.+|++.+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~~g~l~GDVdf~~v~~ 252 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVGINHVDGKIVGDVDFAAVKD 252 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCEEETTEEECSBCHHHHTT
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEecccCcCCceecCccHHHHHh
Confidence 1368899987 99999999999999999983 566777665 4431 13466677654
No 23
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.24 E-value=0.14 Score=54.11 Aligned_cols=186 Identities=19% Similarity=0.172 Sum_probs=124.1
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCcc--HHHHHHHHc---CC--Cceee----------cCCcchHHHHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN--AFDLLEKYG---TT--HLVFN----------DDIQGTASVVLA 368 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~n--Af~lL~ryr---~~--~~~FN----------DDiQGTaaVvLA 368 (542)
+-+|-..|...|++++.+.-||..-|-=+|+...- ---+.+.|+ .. ..++- +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778899999999988998888899998642 111344552 21 12232 222346666666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEcccccccCCCccCCchhc-hhhc
Q 009138 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFK-KPWA 446 (542)
Q Consensus 369 gll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDskGLi~~~R~~~l~~~k-~~fA 446 (542)
++-.+++..|.+|+..||+|.|.|..|...|++|.+. .|. +++ +.|++|-|+.... ++... +.+.
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga-------kvVavsD~~G~i~dp~G--ld~~~l~~~~ 261 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS-------KVVAVSDSRGGIYNPEG--FDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEECTTC--CCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC-------EEEEEEeCCCeEECCCC--CCHHHHHHHH
Confidence 7788889999999999999999999999999988651 253 455 8999999988753 33211 1111
Q ss_pred cccCC--------CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009138 447 HEHEP--------VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (542)
Q Consensus 447 ~~~~~--------~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 513 (542)
..... .-+-.| +-.++.||||=+.. ++..|++-.+.+ .-.+|.--+| |++ +| +++.+.
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~t-~~--a~~~l~ 328 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPTT-PE--ADEILS 328 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCcccC-HH--HHHHHH
Confidence 11110 012334 45678999997776 568999888877 4668888888 653 33 445554
No 24
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.20 E-value=0.075 Score=56.72 Aligned_cols=187 Identities=14% Similarity=0.150 Sum_probs=127.8
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHH---HHHHHcC---C--Ccee----------ecCCcchHHHH
Q 009138 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYGT---T--HLVF----------NDDIQGTASVV 366 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr~---~--~~~F----------NDDiQGTaaVv 366 (542)
.+..|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+. . -.++ ++.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 34456677899999999999999888989999874 222 4556631 1 1222 23334577777
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEcccccccCCCccC---Cchhc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLES---LQHFK 442 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDskGLi~~~R~~~---l~~~k 442 (542)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|+....=+ |..++
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~Gld~~~l~~~~ 286 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEAGIDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCCCCCHHHHHHHH
Confidence 777888899999999999999999999999999998663 53 455 999999999875311 22222
Q ss_pred hhhcc--ccC--CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009138 443 KPWAH--EHE--PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (542)
Q Consensus 443 ~~fA~--~~~--~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 513 (542)
..+-. +-. ..-+-.| +-.++.||||=++. ++.+|++-++.+ .-.+|.--+| |++ +| +++.+.
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCccccC-HH--HHHHHH
Confidence 22110 000 0012334 44678999998876 569999888877 4678888888 653 44 445554
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.12 E-value=0.013 Score=59.40 Aligned_cols=115 Identities=16% Similarity=0.240 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch
Q 009138 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (542)
Q Consensus 362 TaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~ 440 (542)
-.-++-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34678888999999999999999999999976 899999998652 53 57788752
Q ss_pred hchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCC----CCCCHHHHhccc
Q 009138 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQ----SECTAEEAYTWS 515 (542)
Q Consensus 441 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt~~----aEct~edA~~wt 515 (542)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||... --+.+|++.+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~~~gkl~GDVdf~~v~~-- 252 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRLESGKIVGDVDFEEVSK-- 252 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEECTTSCEECSBCHHHHTT--
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcccCCCEeccccHHHHHh--
Confidence 1368899987 99999999999999999984 566777664 55421 3456777644
Q ss_pred CCcEEEEeC
Q 009138 516 QGRAIFASG 524 (542)
Q Consensus 516 ~GraIfASG 524 (542)
++-+.|-
T Consensus 253 --~a~~iTP 259 (285)
T 3p2o_A 253 --KSSYITP 259 (285)
T ss_dssp --TEEEECC
T ss_pred --hheEeCC
Confidence 3444443
No 26
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.08 E-value=0.013 Score=58.33 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA 446 (542)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999888777777754 364 579988874 222 112222222
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEEccCCC
Q 009138 447 HE-------HEPVKELVDAVNAIKPTILIGTSGQG 474 (542)
Q Consensus 447 ~~-------~~~~~~L~eaV~~vkPtvLIG~S~~~ 474 (542)
.. .-+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 89999887654
No 27
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.07 E-value=0.081 Score=56.02 Aligned_cols=186 Identities=15% Similarity=0.202 Sum_probs=118.6
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH--HHHHHHHc---CCC---cee----------ecCCcchHHHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TTH---LVF----------NDDIQGTASVVL 367 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr---~~~---~~F----------NDDiQGTaaVvL 367 (542)
+-.|-..|...|++++.+.-||..-|-=+|+...-. --+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 445667789999999999999999999999997521 12455664 211 222 222345666667
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEccc-----ccccCCCccCCchh
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSK-----GLIVSSRLESLQHF 441 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDsk-----GLi~~~R~~~l~~~ 441 (542)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++ |-|+.... |+..
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga-------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG-------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 7788889999999999999999999999999999865 363 455 89999 99998753 3322
Q ss_pred c-hhhccccCCC------CCH-HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHh
Q 009138 442 K-KPWAHEHEPV------KEL-VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAY 512 (542)
Q Consensus 442 k-~~fA~~~~~~------~~L-~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~ 512 (542)
. +.+......+ ..+ .+.+-.++.||||=++. ++.+|++-.+.+ ...+|.--+| |++ +| +++.+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~t-~e--a~~il 334 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPTT-PE--GDKVL 334 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCSC-HH--HHHHH
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCccccC-HH--HHHHH
Confidence 1 1111111100 001 12234467899997765 668998888877 4677777777 653 33 44555
Q ss_pred c
Q 009138 513 T 513 (542)
Q Consensus 513 ~ 513 (542)
+
T Consensus 335 ~ 335 (421)
T 2yfq_A 335 T 335 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.04 E-value=0.013 Score=59.12 Aligned_cols=107 Identities=13% Similarity=0.261 Sum_probs=82.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~ 439 (542)
+-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 344678889999999998 9999999999985 899999998652 53 57788752
Q ss_pred hhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CC-CCC--CCCCHHHHhc
Q 009138 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NP-TSQ--SECTAEEAYT 513 (542)
Q Consensus 440 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NP-t~~--aEct~edA~~ 513 (542)
..+|.+.++. +|++|...+.++.+++|+++ +.-+|+=++ || ..+ -.+.+|++.+
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~~gkl~GDVdf~~v~~ 241 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVGINYVNDKVVGDANFEDLSE 241 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECCCEEETTEEECSBCHHHHHT
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEeccCccCCceeccccHHHHhh
Confidence 1468999998 99999999999999999983 566887775 44 110 2556666654
No 29
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.89 E-value=0.018 Score=58.40 Aligned_cols=107 Identities=17% Similarity=0.275 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh
Q 009138 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 441 (542)
Q Consensus 363 aaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~ 441 (542)
.-++-.|++..++..+.+|+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 4577888999999999999999999999875 899999998652 53 57777642
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCC----CCCCHHHHhc
Q 009138 442 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQ----SECTAEEAYT 513 (542)
Q Consensus 442 k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt~~----aEct~edA~~ 513 (542)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||... --+.+|++.+
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~~~gkl~GDVdf~~v~~ 253 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQADGRLVGDVEYEVAAQ 253 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSSCCCCSSCSBCHHHHHH
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEecccccccCCcccCccHHHHHh
Confidence 1368899997 99999999999999999983 566777664 66521 3456677655
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.87 E-value=0.014 Score=59.21 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~ 439 (542)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.. .| ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC------------
Confidence 445678888999999999999999999999995 69999988864 24 357888632
Q ss_pred hhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC-----CCCCCHHHHhc
Q 009138 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS-----QSECTAEEAYT 513 (542)
Q Consensus 440 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~-----~aEct~edA~~ 513 (542)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|-. --.+.+|++.+
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~r~~~g~l~GDVdf~~v~~ 251 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGINRLENGKVVGDVVFEDAAK 251 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCEECTTSCEECSBCHHHHHH
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCCccCCCCccCCcCHHHHhh
Confidence 1468999998 99999999999999999983 5668887776531 13556666654
No 31
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.85 E-value=0.01 Score=60.75 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHH---------hCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCC
Q 009138 365 VVLAGLISAMKF---------LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (542)
Q Consensus 365 VvLAgll~Alr~---------~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R 434 (542)
++-.|.+-.++. .|.++...++|++|+|. .|.-+|.++... | ..++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999996 598888888542 4 3589999986655555
Q ss_pred ccCCchhchhhccccCC---C--CCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 435 LESLQHFKKPWAHEHEP---V--KELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 435 ~~~l~~~k~~fA~~~~~---~--~~L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
.+.+... ++.... . .+|.++++. +|++|+..+.++. +|.|+|+ +.-+|+-++-|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434311 121100 1 479999998 9999999999987 9999984 456899999885
No 32
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.84 E-value=0.062 Score=56.98 Aligned_cols=186 Identities=19% Similarity=0.197 Sum_probs=122.5
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHH---HHHHHc---CC--CceeecC----------CcchHHHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TT--HLVFNDD----------IQGTASVVL 367 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr---~~--~~~FNDD----------iQGTaaVvL 367 (542)
+-+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ .. ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456677889999999999999999999999873 222 335552 11 1222221 123665566
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEcccccccCCCccC---Cchhch
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLES---LQHFKK 443 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDskGLi~~~R~~~---l~~~k~ 443 (542)
-++-.+++..|.+|++.+|+|.|.|..|...|++|.+ .|. +++ +.|++|-|+....=+ +..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 6777888889999999999999999999999988854 353 555 999999998864211 222222
Q ss_pred h--------hcccc--CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHh
Q 009138 444 P--------WAHEH--EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAY 512 (542)
Q Consensus 444 ~--------fA~~~--~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~ 512 (542)
. |.... ..+.+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |++ +| +++.+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~t-~~--a~~~l 333 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPTT-PE--AERIL 333 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCBC-HH--HHHHH
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcCC-HH--HHHHH
Confidence 1 11000 11201123 34468999997775 678998888777 4678888888 653 44 44555
Q ss_pred c
Q 009138 513 T 513 (542)
Q Consensus 513 ~ 513 (542)
.
T Consensus 334 ~ 334 (421)
T 1v9l_A 334 Y 334 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 33
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.74 E-value=0.14 Score=55.12 Aligned_cols=187 Identities=14% Similarity=0.166 Sum_probs=124.4
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccH--HHHHHHHcC---C-Ccee----------ecCCcchHHHHHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---T-HLVF----------NDDIQGTASVVLAG 369 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr~---~-~~~F----------NDDiQGTaaVvLAg 369 (542)
+..|...|...||..+.+..||..=|-=+|++..-. --+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 345666777889999998889998888999986321 114455542 1 1111 12334577667777
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEE-EEcccccccCCCccCCchh-------
Q 009138 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHF------- 441 (542)
Q Consensus 370 ll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~-lvDskGLi~~~R~~~l~~~------- 441 (542)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|+...+ ++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~G--id~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPNG--FTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSSC--CCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCCC--CCHHHHHHHHH
Confidence 888889899999999999999999999999998653 53 455 8899988887642 4222
Q ss_pred -c-------hhhcccc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHH
Q 009138 442 -K-------KPWAHEH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAE 509 (542)
Q Consensus 442 -k-------~~fA~~~---~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~e 509 (542)
| ..|+... +.... .+.. .++.||||=+.. ++.+|++-++.+-+ +.-.||.--+| |++ +|. +
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~eA--~ 377 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPST-VDA--I 377 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCBC-HHH--H
T ss_pred HHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCCC-HHH--H
Confidence 1 1222110 00100 1222 568999998885 67999999999854 35679999998 652 343 4
Q ss_pred HHhc
Q 009138 510 EAYT 513 (542)
Q Consensus 510 dA~~ 513 (542)
+.+.
T Consensus 378 ~~L~ 381 (470)
T 2bma_A 378 NLFK 381 (470)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 34
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.72 E-value=0.02 Score=58.34 Aligned_cols=110 Identities=24% Similarity=0.316 Sum_probs=83.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCC
Q 009138 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL 438 (542)
Q Consensus 360 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l 438 (542)
.|-.-++-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3445678888999999999999999999999876 899999998652 53 58888762 1
Q ss_pred chhchhhccccCCCCCHH--HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC----CC------CC
Q 009138 439 QHFKKPWAHEHEPVKELV--DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPT----SQ------SE 505 (542)
Q Consensus 439 ~~~k~~fA~~~~~~~~L~--eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt----~~------aE 505 (542)
.+|. +.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||. .+ -.
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~~~~~~~~g~kl~GD 257 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVGTTPVPDPSRKDGYRLVGD 257 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCCEEESCSCSTTSCEEECS
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEeccCCcCCcccCCceeecC
Confidence 1355 88987 99999999999999999983 566777664 332 11 24
Q ss_pred CCHHHHhc
Q 009138 506 CTAEEAYT 513 (542)
Q Consensus 506 ct~edA~~ 513 (542)
+.+|+|.+
T Consensus 258 Vdf~~v~~ 265 (300)
T 4a26_A 258 VCFEEAAA 265 (300)
T ss_dssp BCHHHHTT
T ss_pred ccHHHHHh
Confidence 67777754
No 35
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.57 E-value=0.058 Score=58.04 Aligned_cols=123 Identities=16% Similarity=0.240 Sum_probs=88.1
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccC
Q 009138 358 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 437 (542)
Q Consensus 358 DiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~ 437 (542)
.+.|.......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |+ +++.+|.+.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 4445555555662 25678899999999999999999999998653 63 6888887521 00
Q ss_pred CchhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 438 LQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 438 l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
+. .+...-...+|.|+++. .|++|......+.++++.++.|. +..||.=.+.-. .|++-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 01111113479999987 99999998778899999999996 577888888755 6777776655
No 36
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.52 E-value=0.014 Score=58.21 Aligned_cols=111 Identities=20% Similarity=0.285 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA 446 (542)
-.|++.+++..+.++++.+++|+|||.+|.+||..|.. .|. ++|+++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888877754 364 578888875 223222321 111
Q ss_pred cccCCCCCHHHHHhccCCcEEEEccCCCCCCCH--HHHHHHHcCCCCcEEEEcC-CCC
Q 009138 447 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTK--EVVEAMASLNEKPIIFSLS-NPT 501 (542)
Q Consensus 447 ~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fte--evv~~Ma~~~erPIIFaLS-NPt 501 (542)
. ....++.++++. +|++|-++..| .... +.+ ......+..+|+=++ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 112356666665 89999776544 2211 011 112234677888885 775
No 37
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.49 E-value=0.1 Score=54.02 Aligned_cols=102 Identities=20% Similarity=0.339 Sum_probs=66.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
++.+.+++|+|||..|..+|+.+... |. ++|+++|+. ..| .....+.|--+.-...++.+++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999999888653 64 579988874 112 1111112211111224688888
Q ss_pred hccCCcEEEEccCCC-CCCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 009138 460 NAIKPTILIGTSGQG-RTFTKEVVEA--MA-SLNEKPIIFSLSNPT 501 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~-g~Fteevv~~--Ma-~~~erPIIFaLSNPt 501 (542)
+. .|++|=+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 75 99999877654 3568888987 43 223455778888885
No 38
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.48 E-value=0.042 Score=56.93 Aligned_cols=178 Identities=17% Similarity=0.215 Sum_probs=112.9
Q ss_pred hhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHH---HHHHHcC---CCcee---ecCCcchHHHHHHHHHHHHHHhC
Q 009138 308 QEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYGT---THLVF---NDDIQGTASVVLAGLISAMKFLG 378 (542)
Q Consensus 308 ~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr~---~~~~F---NDDiQGTaaVvLAgll~Alr~~g 378 (542)
.+-++++..|.+++.+..|+ -|-=+|++.. ..+ +.+.|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 34556777888888887765 4678898753 332 4556652 11111 11112366666667788888889
Q ss_pred C-CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc-CCCCCHH
Q 009138 379 G-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELV 456 (542)
Q Consensus 379 ~-~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~-~~~~~L~ 456 (542)
. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|.+ ..| ..|+... ...-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999998754 363 67788864 111 2222211 0111344
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhcccCCcEEEE
Q 009138 457 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYTWSQGRAIFA 522 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~wt~GraIfA 522 (542)
|..+ ++.|+|+=+ +..+.++++-++.|. -.||.--+| |+..+|+ .++++ ++.++++
T Consensus 226 ell~-~~~DIliP~-A~~~~I~~~~~~~lk----~~iVie~AN~p~t~~eA--~~~L~--~~gIlv~ 282 (355)
T 1c1d_A 226 DVLS-TPCDVFAPC-AMGGVITTEVARTLD----CSVVAGAANNVIADEAA--SDILH--ARGILYA 282 (355)
T ss_dssp GGGG-CCCSEEEEC-SCSCCBCHHHHHHCC----CSEECCSCTTCBCSHHH--HHHHH--HTTCEEC
T ss_pred Hhhc-CccceecHh-HHHhhcCHHHHhhCC----CCEEEECCCCCCCCHHH--HHHHH--hCCEEEE
Confidence 4443 468999954 456799999999993 568888888 6643343 45554 3444543
No 39
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.37 E-value=0.026 Score=57.32 Aligned_cols=91 Identities=22% Similarity=0.314 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA 446 (542)
-.|++.+|+..|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999888888777754 364 6899998852 11111111111221
Q ss_pred c---------ccCCCCCHHHHHhccCCcEEEEccCCC
Q 009138 447 H---------EHEPVKELVDAVNAIKPTILIGTSGQG 474 (542)
Q Consensus 447 ~---------~~~~~~~L~eaV~~vkPtvLIG~S~~~ 474 (542)
. +-++..+|.++++. +|++|-++..|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 1 11111236677776 99999777654
No 40
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.24 E-value=0.03 Score=56.86 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
.|++.+++..|.++++.+++|+|||.||.+|+..|.. .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888899999999999999888888877765 364 689998874 2221111111122211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEEccCCC
Q 009138 448 E------HEPVKEL---VDAVNAIKPTILIGTSGQG 474 (542)
Q Consensus 448 ~------~~~~~~L---~eaV~~vkPtvLIG~S~~~ 474 (542)
. ..+..++ .+.++. +|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 666776 89999877655
No 41
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.22 E-value=0.04 Score=54.37 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=79.0
Q ss_pred HHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCC
Q 009138 374 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 453 (542)
Q Consensus 374 lr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~ 453 (542)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 3456889999999999999999999998854 353 688888742 11 11111100110 0124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCc-EEEEeCC
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGR-AIFASGS 525 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gr-aIfASGs 525 (542)
+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+.+ .|. ++.+.|-
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a~~--~G~~~i~~pg~ 270 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYAEK--QGIKALLAPGL 270 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHHHH--HTCEEEECCCH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHHHH--CCCEEEECCCC
Confidence 68888876 999997766 4799999888885 577888888632 3455655433 343 3444543
No 42
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.08 E-value=0.041 Score=55.60 Aligned_cols=99 Identities=13% Similarity=0.265 Sum_probs=77.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~ 439 (542)
+-.-+|-.|++-.++..|.+|+..++|++|+|. .|.-+|.++.. .|. ...+.+++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445667788899999999999999999999996 58888887743 210 1357777532
Q ss_pred hhchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 440 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|-
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~r 235 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVSR 235 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCCC
Confidence 1479999987 99999999999999999984 456888887663
No 43
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.02 E-value=0.011 Score=51.74 Aligned_cols=109 Identities=14% Similarity=0.230 Sum_probs=65.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~ 440 (542)
|-.+|+.+++-.+-+.. +.+++|+|+|..|..++..+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33455555554433332 7899999999999988877643 242 3 8888863 111 222
Q ss_pred hchhhccccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 441 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
..+.|.-......++.++++. +|++|=+++.+ ..++.+.+ .+.-+|+-+++|.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l------~~g~~vid~~~p~ 113 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSL------MPGKLFIDLGNPP 113 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGC------CTTCEEEECCSSC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHc------CCCCEEEEccCCc
Confidence 222221111234678999986 89999776544 23454433 2467888888885
No 44
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.98 E-value=0.025 Score=56.31 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=57.6
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc
Q 009138 368 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (542)
Q Consensus 368 Agll~Alr~~g-~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA 446 (542)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++|+++|+. .+| .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999988888887754 364 578988874 222 111111221
Q ss_pred c---ccCCCCCHHHHHhccCCcEEEEccCCC
Q 009138 447 H---EHEPVKELVDAVNAIKPTILIGTSGQG 474 (542)
Q Consensus 447 ~---~~~~~~~L~eaV~~vkPtvLIG~S~~~ 474 (542)
. ......++.++++. +|++|-+...+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011246666765 99999887755
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.97 E-value=0.64 Score=49.72 Aligned_cols=186 Identities=17% Similarity=0.176 Sum_probs=120.9
Q ss_pred hhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHH--HHHHHHc---CC--Cceeec----------CCcchHHHHHHHH
Q 009138 308 QEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TT--HLVFND----------DIQGTASVVLAGL 370 (542)
Q Consensus 308 ~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf--~lL~ryr---~~--~~~FND----------DiQGTaaVvLAgl 370 (542)
.|-..|...||..+.+..||..-|-=+|++..-.. -+.+.|+ +. .-++-. .-.-||-=+.-++
T Consensus 138 ~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~ 217 (449)
T 1bgv_A 138 REVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYV 217 (449)
T ss_dssp HHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHH
Confidence 46667777799999888999999999999875211 1233443 21 122211 2234666666677
Q ss_pred HHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCC-chh--------
Q 009138 371 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QHF-------- 441 (542)
Q Consensus 371 l~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l-~~~-------- 441 (542)
-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|+... .+ ++.
T Consensus 218 ~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~~ 284 (449)
T 1bgv_A 218 EAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLEM 284 (449)
T ss_dssp HHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHHH
T ss_pred HHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHHH
Confidence 88888899999999999999999999999988664 53 2344789999988764 24 221
Q ss_pred c-------hhhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHH
Q 009138 442 K-------KPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEA 511 (542)
Q Consensus 442 k-------~~fA~~--~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA 511 (542)
| ..|+.. .+.+ +-.+ +-.++.|+|+=+.. ++.+|++-.+.+.+ |.-.||.--+| |++ +|. ++.
T Consensus 285 k~~~~g~v~~y~~~~~a~~i-~~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~T-~eA--~~~ 357 (449)
T 1bgv_A 285 RASGRNKVQDYADKFGVQFF-PGEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPTT-NEA--LRF 357 (449)
T ss_dssp HHHCCCCTHHHHHHHTCEEE-ETCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCBC-HHH--HHH
T ss_pred HhccCCChhhcccccCCEEe-Cchh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcCC-HHH--HHH
Confidence 1 111110 0000 0011 22568999997775 67999999999964 23579988888 653 332 344
Q ss_pred hc
Q 009138 512 YT 513 (542)
Q Consensus 512 ~~ 513 (542)
+.
T Consensus 358 l~ 359 (449)
T 1bgv_A 358 LM 359 (449)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 46
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=94.84 E-value=0.051 Score=58.10 Aligned_cols=39 Identities=26% Similarity=0.440 Sum_probs=29.8
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 479 KEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 479 eevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
.|+++.|.++|+..+++=.|||. +-+|- -+.++++=++|
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~v 178 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANII 178 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEE
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeE
Confidence 68999999999999999999997 44443 34555655554
No 47
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.78 E-value=0.0086 Score=59.74 Aligned_cols=124 Identities=20% Similarity=0.313 Sum_probs=72.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC--CCHHHHHhcc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~--~~L~eaV~~v 462 (542)
||.|+|||..|.++|..++. .|+ ...++++|.+---..+....+.+.. +|... ... .+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 89999999999999987754 254 2479999985210000000011111 12111 001 23 356776
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCC
Q 009138 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP 526 (542)
Q Consensus 463 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGsp 526 (542)
+|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||. ....+.+.+.+.-.-+|.+|.-
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~---~~~~~~~~~~~~~~rviG~gt~ 141 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV---DLLTDLATQLAPGQPVIGSGTV 141 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH---HHHHHHHHHHSCSSCEEECTTH
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch---HHHHHHHHHhCChhcEEeCCcC
Confidence 8998865544422 2278888998888888888899997 4445555555555567777653
No 48
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.71 E-value=0.063 Score=57.94 Aligned_cols=110 Identities=17% Similarity=0.293 Sum_probs=78.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch
Q 009138 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (542)
Q Consensus 361 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~ 440 (542)
|+......|+ .+.+|..|.+.+++|+|.|..|.++|+.+.. .|+ +++.+|++.. +. +..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~~--~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----CA--LQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----HH--HHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----hH--HHH
Confidence 3333444552 3568999999999999999999999998853 253 6888887521 00 010
Q ss_pred hchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 441 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
. ...-...+|.|+++. .|++|......++++++.++.|. +..||.=.+...
T Consensus 317 ~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 A-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp H-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred H-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0 011112479999987 99999998777899999999996 577888788754
No 49
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.71 E-value=0.061 Score=54.78 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc----CCCCCHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELV 456 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~----~~~~~L~ 456 (542)
++..+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999988754 36 2 68888874 222 222223333210 1113577
Q ss_pred HHHhccCCcEEEEccCCCCC-----CCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 457 DAVNAIKPTILIGTSGQGRT-----FTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~-----Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77775 8999998876652 5889998886 45677777754
No 50
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.68 E-value=0.059 Score=52.83 Aligned_cols=145 Identities=14% Similarity=0.307 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhcC--------CCceeeeecCCCccHHHHHH--HHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCC
Q 009138 314 LHEFMTAVKQNYG--------ERILIQFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD 383 (542)
Q Consensus 314 idefv~av~~~fG--------p~~lIqfEDf~~~nAf~lL~--ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d 383 (542)
+++|++.++..|. -..++.+=|- ++.|..+=. -...+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 5666666664342 2245566666 666654311 00011 3445552 3677777654 5788
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999999888765 364 579999884 233222321 1211 123568888886
Q ss_pred CcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 464 PTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 464 PtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+|++|-++..+ -.+.++.+ .+..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l------~~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSL------KNLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHH------TTCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeeC
Confidence 99999765432 13455444 25778887764
No 51
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.64 E-value=0.064 Score=52.62 Aligned_cols=125 Identities=15% Similarity=0.238 Sum_probs=77.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|+|..|.++|..+... |.+ ..+++++|++ .+ .+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 643 2468888873 11 122222222 11112578898886
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCCCCCCccc-CCEE
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGSPFDPFEY-GDNV 536 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGspf~pv~~-~g~~ 536 (542)
+|++| ++..+ ...+++++.+..+ .++.+|...++..+ .+..-+|.. .+++-+ -|..|..+ .|.+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v~~g~~ 132 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSVRAGAT 132 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGGTCEEE
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHhcCccE
Confidence 88877 44444 4567888888764 56668888888764 233333333 244333 47777766 3444
No 52
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.37 E-value=0.084 Score=53.04 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=66.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCC---CCCHHHHHh
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 460 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~---~~~L~eaV~ 460 (542)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. .+...+|.+...+ . .... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 257999998651 1100012221100 0 0011 136889999
Q ss_pred ccCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 461 AIKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
+ +|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 899986555442 24677888888899998988899997
No 53
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.34 E-value=0.28 Score=51.11 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=81.5
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.|.+.|.-- +.+|=-+++.+++..|..|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|..
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRG-----LGW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 566666432 234445899999999999999999999999999999999998864 364 68888864
Q ss_pred ccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 428 GLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS---G-----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 428 GLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S---~-----~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.- . . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..+|.=.|.
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 21 0 0 0 00123578888876 78877542 1 34578888888875 5667776665
No 54
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.20 E-value=0.082 Score=53.48 Aligned_cols=120 Identities=19% Similarity=0.246 Sum_probs=77.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCcc----CCchhchhhccccCCC---CCHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 456 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~----~l~~~k~~fA~~~~~~---~~L~ 456 (542)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+- ++-+ .+.+.. .+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999862 2211 111111 111111122 5888
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--
Q 009138 457 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS-- 515 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt-- 515 (542)
++++. +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=-|||..- +.+-+.+.+
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---~t~~~~~~~~~ 148 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---MVKVMCEASGV 148 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCC
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---HHHHHHHhcCC
Confidence 89987 89998665443 22 146888899999999898888999732 344454544
Q ss_pred CCcEEEEeC
Q 009138 516 QGRAIFASG 524 (542)
Q Consensus 516 ~GraIfASG 524 (542)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 233467776
No 55
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.16 E-value=0.11 Score=53.85 Aligned_cols=169 Identities=12% Similarity=0.103 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhcCCCceeeeecCCCccHHHHHHHHcCCC-ceeecC---------CcchHHHHHHHHHHHHHHh-CC
Q 009138 311 AELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTH-LVFNDD---------IQGTASVVLAGLISAMKFL-GG 379 (542)
Q Consensus 311 ~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~-~~FNDD---------iQGTaaVvLAgll~Alr~~-g~ 379 (542)
.+++..|.+++.+.+|+ -|-=+|++..- . .+...-+++ ++---- ..-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~-~-~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV-D-DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH-H-HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH-H-HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 35667777777777765 46777886533 2 333333333 111111 1235544455556666664 76
Q ss_pred -CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 380 -SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 380 -~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
+|++.+|+|.|+|..|..+|+.+.+ .|. ++++.|++ . +.+..+.+.|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN----K---AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----H---HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC----H---HHHHHHHHHcC---CEEEChHHH
Confidence 8999999999999999999999865 363 57788852 1 11333333221 011123333
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 513 (542)
.. .+.||+|=+ +..+.++++.++.| .-.+|.--+| |+..+| +.++++
T Consensus 227 l~-~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~t~~e--a~~~L~ 274 (364)
T 1leh_A 227 YG-VTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQLKDPR--HGKYLH 274 (364)
T ss_dssp TT-CCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCBSSHH--HHHHHH
T ss_pred hc-cCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCcccHH--HHHHHH
Confidence 32 578999965 45669999988888 3567776777 543224 444544
No 56
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=94.04 E-value=0.56 Score=49.45 Aligned_cols=115 Identities=23% Similarity=0.276 Sum_probs=81.3
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCccHHH---HHHHHc---CCC-c---eeecC----------CcchHHH
Q 009138 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TTH-L---VFNDD----------IQGTASV 365 (542)
Q Consensus 306 ~G~ey~~~idefv~av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr---~~~-~---~FNDD----------iQGTaaV 365 (542)
+-+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 3456677889999999998899888989999873 222 334442 221 2 33222 2346666
Q ss_pred HHHHHHHHHHHhCCC-CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEE-cccccccC
Q 009138 366 VLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV-DSKGLIVS 432 (542)
Q Consensus 366 vLAgll~Alr~~g~~-L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lv-DskGLi~~ 432 (542)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~~ 251 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIYN 251 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccccC
Confidence 666788889999999 9999999999999999999988541 254 45544 88775443
No 57
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.01 E-value=0.064 Score=53.11 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=62.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch---hchhhccccCC--CCCHHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH---FKKPWAHEHEP--VKELVDA 458 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~---~k~~fA~~~~~--~~~L~ea 458 (542)
.||.|+|||+.|.++|..|+.. |+ ..+++++|.+- ++.+.+.. +...+....-. ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999998654 54 14799999851 11111110 00011100001 1456 67
Q ss_pred HhccCCcEEEEccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 459 VNAIKPTILIGTSGQG-------RTF-----------TKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~-------g~F-----------teevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
++. +|++|=+...+ |.. -+++++.|.++++..+|+-+|||-.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 775 89888554432 211 2688889988888888888999973
No 58
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.96 E-value=0.069 Score=51.05 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=62.5
Q ss_pred hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc--cCCCccCCc-hhchhhccc--cCC
Q 009138 377 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQ-HFKKPWAHE--HEP 451 (542)
Q Consensus 377 ~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi--~~~R~~~l~-~~k~~fA~~--~~~ 451 (542)
...++...||.|+|+|..|.++|..|... | .+++++|++--- .....+.+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999998763 5 368888875211 000000000 001223322 122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 009138 452 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPT 501 (542)
Q Consensus 452 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M-a~~~erPIIFaLSNPt 501 (542)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3589999987 89887 444332 334666666 4333677999999973
No 59
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.86 E-value=0.35 Score=52.46 Aligned_cols=179 Identities=20% Similarity=0.257 Sum_probs=117.6
Q ss_pred cchhhhHHHHHHHHHHHHH--hcCCCceeeeecCCCccH--HHHHHHHcC---CC------ceeecCC---------cch
Q 009138 305 AIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNA--FDLLEKYGT---TH------LVFNDDI---------QGT 362 (542)
Q Consensus 305 ~~G~ey~~~idefv~av~~--~fGp~~lIqfEDf~~~nA--f~lL~ryr~---~~------~~FNDDi---------QGT 362 (542)
.+-.|-..|.-.||+.+.+ ..||..-|-=+|++..-. --+.+.|+. .. ++-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3556778889999999985 788988899999986422 125667742 11 1212211 235
Q ss_pred HHHHHHHHHH------HHHHhCC--CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCC
Q 009138 363 ASVVLAGLIS------AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (542)
Q Consensus 363 aaVvLAgll~------Alr~~g~--~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R 434 (542)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+ .|. +=+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECCC
Confidence 5444444443 3456675 5899999999999999999999875 363 3455899999999764
Q ss_pred ccCCch-----hchhhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009138 435 LESLQH-----FKKPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (542)
Q Consensus 435 ~~~l~~-----~k~~fA~~--~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 501 (542)
.++. +|.....- -+....+.+.+-.++.||||=+... +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 2433 22221110 0000001112456789999988875 79999998887 4789999999 54
No 60
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.84 E-value=0.12 Score=52.63 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=61.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc----ccCCCCCH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKEL 455 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~----~~~~~~~L 455 (542)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999988854 363 688888741 11 1111111111 01122467
Q ss_pred HHHHhccCCcEEEEccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 456 VDAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 888886 899999876553 46999999996 44566667654
No 61
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.74 E-value=0.36 Score=50.49 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=85.5
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
..|.+.|.-- +.+|=-+++.+++..|..|..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|.
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEA-----LGI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECC
Confidence 3566666532 345556899999999999999999999999999999999999864 365 6888886
Q ss_pred cccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC--------CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009138 427 KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG--------QGRTFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 427 kGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~--------~~g~Fteevv~~Ma~~~erPIIFaLS 498 (542)
.. .. .. ......+|.|+++. .|+++=.-- .-+.|+++.++.|. +..|+.=.|
T Consensus 151 ~~------~~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR------AA-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH------HH-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch------HH-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 00 00 11224578888887 888874321 34588888888886 677887777
Q ss_pred CC
Q 009138 499 NP 500 (542)
Q Consensus 499 NP 500 (542)
.-
T Consensus 211 RG 212 (381)
T 3oet_A 211 RG 212 (381)
T ss_dssp CG
T ss_pred CC
Confidence 63
No 62
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.69 E-value=0.13 Score=50.26 Aligned_cols=107 Identities=16% Similarity=0.325 Sum_probs=68.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
.|++.+++..|..+++.+++|+|+|.+|.++|..+... |. +++++|+. .++ .....+.|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999999888653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQGRTFT--KEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Ft--eevv~~Ma~~~erPIIFaLSN 499 (542)
.....++.++++. +|++|-+...+ ... ++.+. .....+..+|+-++.
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0111267777775 99999776544 221 11221 122345678888887
No 63
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.52 E-value=0.53 Score=50.72 Aligned_cols=107 Identities=16% Similarity=0.206 Sum_probs=76.3
Q ss_pred HHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCC
Q 009138 375 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVK 453 (542)
Q Consensus 375 r~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~ 453 (542)
+..+..+.+.+++|+|+|..|.++|+.+.. .|. +++.+|++- . +...|.. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~----~--------~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP----I--------NALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH----H--------HHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----H--------HHHHHHHcCCEEe
Confidence 456678899999999999999999988854 363 688888641 1 1111211 11124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHh
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAY 512 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~ 512 (542)
++.|+++. .|++|-+.+..++++++.++.|. +.-+|.-.+... .|+..+..+
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~ 373 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLE 373 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHH
Confidence 68888876 99999998888899999999996 567887777765 367665544
No 64
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.52 E-value=0.73 Score=46.25 Aligned_cols=122 Identities=17% Similarity=0.162 Sum_probs=82.1
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhc
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 410 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 410 (542)
..+.|.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~ 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANA-----M 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHH-----T
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHH-----C
Confidence 4567777543 23444588888888775 3678999999999999999999998864 3
Q ss_pred CCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHH
Q 009138 411 NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMA 486 (542)
Q Consensus 411 G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma 486 (542)
|+ +++.+|+.. .. . ..+ .+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~~-~---~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----IR-E---KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----CH-H---HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----ch-h---HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888641 10 0 000 01 0111378898886 898885432 33678888888886
Q ss_pred cCCCCcEEEEcCCC
Q 009138 487 SLNEKPIIFSLSNP 500 (542)
Q Consensus 487 ~~~erPIIFaLSNP 500 (542)
+..++.-.|.-
T Consensus 224 ---~ga~lIn~arg 234 (313)
T 2ekl_A 224 ---DNVIIVNTSRA 234 (313)
T ss_dssp ---TTEEEEESSCG
T ss_pred ---CCCEEEECCCC
Confidence 56788877773
No 65
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.51 E-value=0.045 Score=55.11 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=72.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc--ccc--cCCCccCCchhchhhccccCCCCCHHHH
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK--GLI--VSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk--GLi--~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- .++...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 243111112479999975 100 0000001221111222221222578999
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCCCCCCCCHHHHhccc
Q 009138 459 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPTSQSECTAEEAYTWS 515 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt~~aEct~edA~~wt 515 (542)
+++ .|++|=+.+.+.. .++++++++.+++ .+.+|+-.|||. -.+..-+.+.+
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv---~~~t~~~~~~~ 147 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA---NTNAYIAMKSA 147 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch---HHHHHHHHHHc
Confidence 997 8999866554431 3578899999986 787777789996 44444444443
No 66
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.34 E-value=0.086 Score=56.21 Aligned_cols=125 Identities=16% Similarity=0.233 Sum_probs=75.4
Q ss_pred CCCceEEEeCcchH--HHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc---cCCCCCH
Q 009138 381 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---HEPVKEL 455 (542)
Q Consensus 381 L~d~riv~~GAGsA--g~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~---~~~~~~L 455 (542)
+++.||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+. -....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 45679999999995 78999888752 122 2 3899999751 1100000000011110 0112589
Q ss_pred HHHHhccCCcEEEEccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEEcCC
Q 009138 456 VDAVNAIKPTILIGTSGQG---------------RT---------------------FTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~---------------g~---------------------Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.||+++ +|++|=.-.+| |. .-.++++.|.++++.-+|+-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89888544332 22 13577888889999999999999
Q ss_pred CCCCCCCCHHHHhc-ccCCcEEEEeC
Q 009138 500 PTSQSECTAEEAYT-WSQGRAIFASG 524 (542)
Q Consensus 500 Pt~~aEct~edA~~-wt~GraIfASG 524 (542)
|. . +..+-+++ +.+- -+|..+
T Consensus 148 Pv--d-i~t~~~~k~~p~~-rviG~C 169 (450)
T 3fef_A 148 PM--S-VCTRVLYKVFPGI-KAIGCC 169 (450)
T ss_dssp SH--H-HHHHHHHHHCTTC-EEEECC
T ss_pred ch--H-HHHHHHHHHCCCC-CEEEeC
Confidence 97 2 33444444 3333 345543
No 67
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.29 E-value=0.13 Score=45.34 Aligned_cols=102 Identities=12% Similarity=0.165 Sum_probs=54.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 456 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 456 (542)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 34566899999999999999998855 25 3688898752 2211122 11111111 111111233
Q ss_pred HH-HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 457 DA-VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 457 ea-V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
++ ++ ++|++|-+.... .....+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 44 489999776643 233444444444355555666555
No 68
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.28 E-value=0.12 Score=51.49 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-.|++.+|+..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999888888777754 364 579988874
No 69
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.27 E-value=0.11 Score=51.93 Aligned_cols=104 Identities=19% Similarity=0.315 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
.|++.+|+..|.++++.+++|+|||.||.+++..|.. .|. ++|+++++. .+|.+.|. ..|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 7889999988999999999999999998888887765 364 579988874 22221111 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC---C----CCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQG---R----TFTKEVVEAMASLNEKPIIFSLS-NPT 501 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~~---g----~Fteevv~~Ma~~~erPIIFaLS-NPt 501 (542)
..++.+.-+ +++|++|-++..| . .+..+.++ +..+||=+. ||.
T Consensus 168 ----~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 ----VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp ----EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred ----cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 012222222 3699999877543 1 14455442 567888775 774
No 70
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.09 E-value=0.081 Score=52.62 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=64.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccC----CchhchhhccccCC---CCCHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHEP---VKELV 456 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~----l~~~k~~fA~~~~~---~~~L~ 456 (542)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++.+. +.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 1599999852 21110 1111 111110111 1456
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 457 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
++++. +|++|=+.+.+.. +.+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77876 8988866544421 34678888888888999999999963
No 71
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.03 E-value=0.17 Score=50.77 Aligned_cols=121 Identities=17% Similarity=0.254 Sum_probs=75.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~v 462 (542)
.||.|+|||..|.++|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998653 54 258999998631 1111111221 2111 0111466 77887
Q ss_pred CCcEEEEccCCC--C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 463 KPTILIGTSGQG--R-----------TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 463 kPtvLIG~S~~~--g-----------~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
.|++|=..+.+ | -.-+++++.|.++++.-+|+-.|||.. ...+-+++.+. -.-+|++|.
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~gt 151 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIGC 151 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCCC
Confidence 99998655443 1 013678888999999999888999973 55555555321 224667763
No 72
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.02 E-value=0.12 Score=51.11 Aligned_cols=155 Identities=16% Similarity=0.236 Sum_probs=88.2
Q ss_pred HHHHHHHHHH-hcCCCceeeeecCCCccHHHHHHHHc---------CCCceeecC-CcchHHHHHHHHHHH-HHHhCCCC
Q 009138 314 LHEFMTAVKQ-NYGERILIQFEDFANHNAFDLLEKYG---------TTHLVFNDD-IQGTASVVLAGLISA-MKFLGGSL 381 (542)
Q Consensus 314 idefv~av~~-~fGp~~lIqfEDf~~~nAf~lL~ryr---------~~~~~FNDD-iQGTaaVvLAgll~A-lr~~g~~L 381 (542)
+.++++.++. .|+. ++.--=-...+++++++.. +.+ ++.|+ ..|.-.= ..|++.+ ++..|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 5667776653 4433 4333323344555555432 223 33343 3553333 4588888 88888899
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc---ccCCCCCHHHH
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---EHEPVKELVDA 458 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~---~~~~~~~L~ea 458 (542)
++.+++|+|||.+|.+++..|.+ .|. ++|+++++. .++. ....+.+.. ......+|.+
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~----~~~a---~~la~~~~~~~~~~~~~~~l~~- 179 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD----MAKA---LALRNELDHSRLRISRYEALEG- 179 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC----HHHH---HHHHHHHCCTTEEEECSGGGTT-
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHH---HHHHHHhccCCeeEeeHHHhcc-
Confidence 99999999999888888777755 364 579988874 2221 122222221 0011223322
Q ss_pred HhccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 009138 459 VNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSL-SNPT 501 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaL-SNPt 501 (542)
-++|++|-++..+ -.+..+.+ .+..+||=+ .||.
T Consensus 180 ---~~~DivInaTp~gm~~~~~~i~~~~l------~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 180 ---QSFDIVVNATSASLTADLPPLPADVL------GEAALAYELAYGKG 219 (272)
T ss_dssp ---CCCSEEEECSSGGGGTCCCCCCGGGG------TTCSEEEESSCSCC
T ss_pred ---cCCCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeecCCC
Confidence 4699999876543 12444432 367788877 6764
No 73
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.93 E-value=0.035 Score=54.17 Aligned_cols=131 Identities=16% Similarity=0.195 Sum_probs=70.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-------hccc--------
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE-------- 448 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~-------fA~~-------- 448 (542)
.||.|+|+|..|.+||..++.+ |. +++++|.+- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998763 64 688888741 1 11111111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 449 -------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 449 -------~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
.....++.|+++. +|++|=. .... ...+++++.+.+....-.|+ .||-.+.+ .++..+......-
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~~---~~~la~~~~~~~~ 138 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTLL---PSDLVGYTGRGDK 138 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSSC---HHHHHHHHSCGGG
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCCC---HHHHHhhcCCCcc
Confidence 0123578888886 8988843 2221 15566777776554444444 34444333 3332222221112
Q ss_pred EEeCCCCCCccc-CCEEEccc
Q 009138 521 FASGSPFDPFEY-GDNVFVPG 540 (542)
Q Consensus 521 fASGspf~pv~~-~g~~~~pg 540 (542)
|....||.|+.. ....+.||
T Consensus 139 ~ig~h~~~p~~~~~lvevv~~ 159 (283)
T 4e12_A 139 FLALHFANHVWVNNTAEVMGT 159 (283)
T ss_dssp EEEEEECSSTTTSCEEEEEEC
T ss_pred eEEEccCCCcccCceEEEEeC
Confidence 344457767654 33444443
No 74
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.86 E-value=0.053 Score=54.43 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=76.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc--CCCCCHHHHHhcc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNAI 462 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~--~~~~~L~eaV~~v 462 (542)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-++.+...+|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 44 24799999753111100001222221121110 00135 778887
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeC
Q 009138 463 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (542)
Q Consensus 463 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASG 524 (542)
+|++|=+.+.+ |- .-+++++.|.++++..+|+-.|||. .....-+++.+. -+-+|++|
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~~g~p~~rviG~g 143 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKESGKPRNEVFGMG 143 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHHSCCCTTSEEECS
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHhcCCCHHHEeecc
Confidence 89887555444 31 1257778889999999999999996 456666666542 23456665
No 75
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.75 E-value=0.081 Score=53.44 Aligned_cols=126 Identities=14% Similarity=0.245 Sum_probs=74.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC---CCHHHHHh
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVDAVN 460 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~---~~L~eaV~ 460 (542)
.||.|+|||+.|.++|.+++. .|+ -+++++|.+-=..++-...+.+...++.. ...+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGS-PAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCC-CCEEEECCCH-HHHC
Confidence 589999999999999988765 254 13999998521111000011111111111 1111 466 7888
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEeC
Q 009138 461 AIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFASG 524 (542)
Q Consensus 461 ~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt--~GraIfASG 524 (542)
. +|++|=+.+.+ |. .-+++.+.+.++++.-+|+-.|||.. ...+-+.+.+ ...-+|++|
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~---~~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD---AMVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGEEESC
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH---HHHHHHHHhcCCChhhEEEeC
Confidence 7 89988554333 21 24678888888888888776799973 2344444433 234567777
Q ss_pred CCC
Q 009138 525 SPF 527 (542)
Q Consensus 525 spf 527 (542)
.+.
T Consensus 157 t~L 159 (328)
T 2hjr_A 157 GVL 159 (328)
T ss_dssp HHH
T ss_pred cHH
Confidence 444
No 76
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.66 E-value=0.17 Score=48.68 Aligned_cols=104 Identities=20% Similarity=0.305 Sum_probs=64.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999988754 252 58888874 111 1111112211
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQGRTFT--KEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Ft--eevv~~Ma~~~erPIIFaLSN 499 (542)
. ..++.++ +. +|++|-+...+ ... ++++. .....+..+|+-++.
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~-~~~~~~~~l~-~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG-LEDPSASPLP-AELFPEEGAAVDLVY 207 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT-TTCTTCCSSC-GGGSCSSSEEEESCC
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC-CCCCCCCCCC-HHHcCCCCEEEEeec
Confidence 1 3466676 54 99999776644 211 01221 122235668888774
No 77
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.57 E-value=0.055 Score=54.26 Aligned_cols=126 Identities=16% Similarity=0.274 Sum_probs=73.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC-CCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~-~~L~eaV~~v 462 (542)
.||.|+|||..|.++|..+... |+ ...|+++|.+--..+....++.+. .++....-.+ .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5899999999999999776542 44 257999998621111100012111 1111100000 133566776
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 463 KPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 463 kPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+. ...+++++.|.++++.-++|-.|||- -...+-+++.+. -.-+|.+|.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv---~~~~~~~~~~s~~p~~rviG~gt 149 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV---DILTYATWKFSGLPHERVIGSGT 149 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHTCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHHHhCCCHHHEEeccc
Confidence 899986654443 23467888888888888888899997 344455555321 123566654
No 78
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.55 E-value=0.07 Score=44.95 Aligned_cols=103 Identities=14% Similarity=0.183 Sum_probs=53.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH-
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA- 458 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea- 458 (542)
++..+|+|+|+|..|..+|+.+.. .|. +++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999988854 252 577888742 111112111111111 11111123332
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489999665432012233444444455566777777765
No 79
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.55 E-value=1.5 Score=44.17 Aligned_cols=121 Identities=18% Similarity=0.213 Sum_probs=76.4
Q ss_pred CCCceeecCCc---chHHHHHHHHHHHHHHh-------------------------CCCCCCceEEEeCcchHHHHHHHH
Q 009138 350 TTHLVFNDDIQ---GTASVVLAGLISAMKFL-------------------------GGSLADQRFLFLGAGEAGTGIAEL 401 (542)
Q Consensus 350 ~~~~~FNDDiQ---GTaaVvLAgll~Alr~~-------------------------g~~L~d~riv~~GAGsAg~GIA~l 401 (542)
..++|.|---- .+|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 35666665332 33444778888876621 457889999999999999999998
Q ss_pred HHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc-C---CCCCC
Q 009138 402 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS-G---QGRTF 477 (542)
Q Consensus 402 l~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S-~---~~g~F 477 (542)
+.. .|. +++.+|+.. .. + .. ..+ .-...+|.|+++. +|+++=.- . ..+.+
T Consensus 169 l~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKG-----FNM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHH-----TTC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHh-----CCC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 864 363 688888742 11 1 00 011 0112478888886 88876432 1 12567
Q ss_pred CHHHHHHHHcCCCCcEEEEcCC
Q 009138 478 TKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 478 teevv~~Ma~~~erPIIFaLSN 499 (542)
+++.++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 778888775 5667776664
No 80
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.53 E-value=0.88 Score=45.79 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=84.7
Q ss_pred eeeecCCCccHHHHHHHHcCCCceeecCCc---chHHHHHHHHHHHHHHh---------------------CCCCCCceE
Q 009138 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQ---GTASVVLAGLISAMKFL---------------------GGSLADQRF 386 (542)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~~~~~FNDDiQ---GTaaVvLAgll~Alr~~---------------------g~~L~d~ri 386 (542)
|+.-..+..|- ++-.--+..++|.|---- .+|=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555554442 221112356788876432 34444788888887622 356889999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcE
Q 009138 387 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI 466 (542)
Q Consensus 387 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtv 466 (542)
.|+|+|..|..+|+.+.. .|+ +++.+|+.. .+ ....+ .+ ... ..++.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~-~~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAE-FVSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCE-ECCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Cce-eCCHHHHHhh--CCE
Confidence 999999999999998753 364 588888641 11 11111 11 001 1278888876 888
Q ss_pred EEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 467 LIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 467 LIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+|=.-. ..+.++++.++.|. +..+|.-.|.
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 774321 23567778888775 4567766665
No 81
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.49 E-value=0.058 Score=53.76 Aligned_cols=125 Identities=17% Similarity=0.257 Sum_probs=75.1
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc--cccccCCCccCCchhchhhccccCC-CCCHHHHH
Q 009138 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAV 459 (542)
Q Consensus 384 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs--kGLi~~~R~~~l~~~k~~fA~~~~~-~~~L~eaV 459 (542)
.||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +..+..- ..+ .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHh
Confidence 3899999 99999999887754 243 246999997 31000000001222111 1111000 023 6677
Q ss_pred hccCCcEEEEccCCCC---C-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEe
Q 009138 460 NAIKPTILIGTSGQGR---T-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFAS 523 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g---~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfAS 523 (542)
++ +|++|=+.+.+. . .+++++++|.+++.+.+|+--|||. ....+-+++.+. -.-+|++
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHHSSSCGGGEEEC
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHHcCCCHHHeeec
Confidence 76 999987666543 2 4678899999999999999999996 445555555431 1246666
Q ss_pred CC
Q 009138 524 GS 525 (542)
Q Consensus 524 Gs 525 (542)
|.
T Consensus 144 gt 145 (303)
T 1o6z_A 144 GG 145 (303)
T ss_dssp CH
T ss_pred cc
Confidence 54
No 82
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.44 E-value=0.097 Score=53.05 Aligned_cols=127 Identities=17% Similarity=0.274 Sum_probs=75.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|||..|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+.. +|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877543 44 2589999984100000000122211 232211000234677887
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 463 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. -...+-+++.+. -.-+|.+|.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEEccc
Confidence 9999866655432 2246777788889999999999997 445555655431 124666654
No 83
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.41 E-value=0.088 Score=52.88 Aligned_cols=129 Identities=15% Similarity=0.286 Sum_probs=77.8
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-cccCCCCCHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-~~~~~~~~L~eaV 459 (542)
....||.|+|||..|..+|-.|+.. |+ -..++++|.+-=..++....|.+. .+|. .+..-..+..+++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~ 72 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDC 72 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHh
Confidence 3457999999999999998877542 44 257999997521011100112222 2333 1100001346778
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEe
Q 009138 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFAS 523 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfAS 523 (542)
++ +|++|=+.+.+.. +=+++++.|.++++.-+|+-.|||. -...+-+++.+. -.-+|.+
T Consensus 73 ~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 73 HD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEEC
T ss_pred CC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHhCCCHHHEEec
Confidence 87 9999866555432 2246777888899999999999996 445555655431 1246666
Q ss_pred CC
Q 009138 524 GS 525 (542)
Q Consensus 524 Gs 525 (542)
|.
T Consensus 148 gt 149 (317)
T 3d0o_A 148 GT 149 (317)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 84
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.40 E-value=0.12 Score=52.26 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=74.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCcc----CCchhchhhccccCCC---CCHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 456 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~----~l~~~k~~fA~~~~~~---~~L~ 456 (542)
.||.|+|||..|.++|.+++.. |+ + +++++|.+ .++-+ .+.+...+.... ..+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~----~--~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~-~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL----G--DVVLFDIV----KNMPHGKALDTSHTNVMAYSN-CKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS----SSHHHHHHHHHHTHHHHHTCC-CCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCC----HHHHHHHHHHHHhhhhhcCCC-cEEEECCCH-
Confidence 4899999999999999888753 54 1 39999975 22211 111111111111 111 467
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--
Q 009138 457 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS-- 515 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt-- 515 (542)
++++. +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=.|||... ..+-+.+.+
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~---~t~~~~~~~g~ 142 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV---MVQLLHQHSGV 142 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH---HHHHHHHHHCC
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH---HHHHHHHhcCC
Confidence 78887 89998664333 21 357788888888988888778999743 344454443
Q ss_pred CCcEEEEeCC
Q 009138 516 QGRAIFASGS 525 (542)
Q Consensus 516 ~GraIfASGs 525 (542)
...-+|++|.
T Consensus 143 ~~~rviG~gt 152 (322)
T 1t2d_A 143 PKNKIIGLGG 152 (322)
T ss_dssp CGGGEEECCH
T ss_pred ChHHEEeccC
Confidence 2344677763
No 85
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.37 E-value=0.55 Score=47.34 Aligned_cols=110 Identities=13% Similarity=0.171 Sum_probs=71.0
Q ss_pred HHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc---
Q 009138 371 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--- 447 (542)
Q Consensus 371 l~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~--- 447 (542)
+++-.+..+ ...++.|+|+|..|-.+++.+... .++ ++|+++|+. +.+ .+...+..
T Consensus 111 laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~---~la~~l~~~~g 169 (313)
T 3hdj_A 111 LAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASP---EILERIGRRCG 169 (313)
T ss_dssp HHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCH---HHHHHHHHHHT
T ss_pred HHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHH---HHHHHHHHhcC
Confidence 444444332 457999999999999888877653 232 689999987 212 22222221
Q ss_pred -ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 009138 448 -EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEEA 511 (542)
Q Consensus 448 -~~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~aEct~edA 511 (542)
+.... ++.|+++. .|++|-+.... -.|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 170 ~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 170 VPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp SCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 11223 89999998 99999765433 24554433 36788988876 44 579998854
No 86
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.35 E-value=0.22 Score=49.48 Aligned_cols=116 Identities=20% Similarity=0.312 Sum_probs=67.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch-hchhhc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWA 446 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~-~k~~fA 446 (542)
.|++.+++..|.++++.|+|++|||-|+.+|+-.|.+ .|. ++|+++++. ..|.+.|.+ ....|.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt----~~ra~~la~~~~~~~~ 174 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS----TARMGAVCELLGNGFP 174 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC----HHHHHHHHHHHhccCC
Confidence 4567888888999999999999999999999877754 364 689999873 333222221 111111
Q ss_pred cccCCCCCHHHHHhccCCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH
Q 009138 447 HEHEPVKELVDAVNAIKPTILIGTSGQGR------TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTA 508 (542)
Q Consensus 447 ~~~~~~~~L~eaV~~vkPtvLIG~S~~~g------~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~ 508 (542)
. .......+.++. .|++|=++..|= -+.++.+.. ..+..++|=+. -+|+-||
T Consensus 175 ~--~~~~~~~~~~~~--~dliiNaTp~Gm~~~~~~p~~~~~~~~---l~~~~~v~D~v---Y~P~~T~ 232 (269)
T 3tum_A 175 G--LTVSTQFSGLED--FDLVANASPVGMGTRAELPLSAALLAT---LQPDTLVADVV---TSPEITP 232 (269)
T ss_dssp T--CEEESCCSCSTT--CSEEEECSSTTCSTTCCCSSCHHHHHT---CCTTSEEEECC---CSSSSCH
T ss_pred c--ceehhhhhhhhc--ccccccCCccccCCCCCCCCChHHHhc---cCCCcEEEEEc---cCCCCCH
Confidence 1 001111122232 789987766541 144454433 34566777554 1244565
No 87
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=92.26 E-value=0.065 Score=56.91 Aligned_cols=127 Identities=14% Similarity=0.255 Sum_probs=78.8
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc--c-cCC---CCCHH
Q 009138 384 QRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--E-HEP---VKELV 456 (542)
Q Consensus 384 ~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~--~-~~~---~~~L~ 456 (542)
.||.|+|||+. |.+++..|+.. ..+++ -..++|+|.+-- +++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 257999998530 0221111111122211 1 111 25789
Q ss_pred HHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 457 DAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
|++++ +|++|=..++++. .=+++++.|.++|+..+|+-.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv- 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA- 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH-
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH-
Confidence 99998 9999866665431 1358889999999999999999997
Q ss_pred CCCCCHHHHhcccCCcEEEEeC
Q 009138 503 QSECTAEEAYTWSQGRAIFASG 524 (542)
Q Consensus 503 ~aEct~edA~~wt~GraIfASG 524 (542)
-+..+-+++.+.-.-+|.+|
T Consensus 156 --divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 --GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp --HHHHHHHHHHCCCCCEEECC
T ss_pred --HHHHHHHHHhCCCCCEEEeC
Confidence 35555666766433577776
No 88
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.19 E-value=0.12 Score=52.16 Aligned_cols=126 Identities=14% Similarity=0.248 Sum_probs=74.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|||..|..+|-+|+.. ++ -..|+|+|.+-=-.++-..+|.+.. +|..+..-..+-.+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988887553 44 2589999974100000000122211 333211000234667877
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 464 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 464 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. -...+-+++.+. -.-+|.+|.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 147 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV---DILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEeccc
Confidence 9999865554421 2346777888899999999999997 445556656431 124666655
No 89
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=92.13 E-value=0.12 Score=55.62 Aligned_cols=125 Identities=14% Similarity=0.172 Sum_probs=76.8
Q ss_pred CceEEEeCcchHH--HHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-c--ccCC---CCC
Q 009138 383 DQRFLFLGAGEAG--TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEP---VKE 454 (542)
Q Consensus 383 d~riv~~GAGsAg--~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-~--~~~~---~~~ 454 (542)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++.+........+. . .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999964 5556666531 121 135799999853 21111111111111 1 0111 257
Q ss_pred HHHHHhccCCcEEEEccCCC---------------CCCC-------------------------HHHHHHHHcCCCCcEE
Q 009138 455 LVDAVNAIKPTILIGTSGQG---------------RTFT-------------------------KEVVEAMASLNEKPII 494 (542)
Q Consensus 455 L~eaV~~vkPtvLIG~S~~~---------------g~Ft-------------------------eevv~~Ma~~~erPII 494 (542)
+.+++++ +|++|=..+.+ |.|. +++++.|.++|+..+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899997 99988555321 2333 6899999999999999
Q ss_pred EEcCCCCCCCCCCHHHHhcccCCcEEEEeCC
Q 009138 495 FSLSNPTSQSECTAEEAYTWSQGRAIFASGS 525 (542)
Q Consensus 495 FaLSNPt~~aEct~edA~~wt~GraIfASGs 525 (542)
+-.|||. -+..+-+.++. ..-+|.+|.
T Consensus 149 i~~TNPv---di~t~~~~k~p-~~rviG~c~ 175 (480)
T 1obb_A 149 LQAANPI---FEGTTLVTRTV-PIKAVGFCH 175 (480)
T ss_dssp EECSSCH---HHHHHHHHHHS-CSEEEEECS
T ss_pred EEeCCcH---HHHHHHHHHCC-CCcEEecCC
Confidence 9999997 34555556654 445677653
No 90
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.94 E-value=0.13 Score=49.82 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=60.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCC--C-----ccCCchhchh-----hcc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS--R-----LESLQHFKKP-----WAH 447 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~--R-----~~~l~~~k~~-----fA~ 447 (542)
+|++.+|+|+|+|..|..+|+.|+.+ |+ .+|.++|.+-+=.++ | .+++-..|.. +.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~ 96 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR 96 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH
Confidence 45678999999999999999999875 65 689999987421110 0 0011111111 111
Q ss_pred c---------cCCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 009138 448 E---------HEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 497 (542)
Q Consensus 448 ~---------~~~~--~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL 497 (542)
- .... .++.+.++. .|++|-++.. .-+...+...+.....|+|.+-
T Consensus 97 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 97 INPHIAITPVNALLDDAELAALIAE--HDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHT--SSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEE
T ss_pred HCCCcEEEEEeccCCHhHHHHHHhC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEee
Confidence 0 0011 135566664 8999877642 2344555555555567887753
No 91
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.86 E-value=0.19 Score=51.59 Aligned_cols=96 Identities=17% Similarity=0.275 Sum_probs=63.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc----cCCCCCH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKEL 455 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~----~~~~~~L 455 (542)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999988854 363 688888741 11 21111112110 0112357
Q ss_pred HHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 456 VDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.+.++. .|++|.+...+ ..++++.++.|. +.-+|.-+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 888876 89999876544 457999999986 4556766763
No 92
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.86 E-value=0.8 Score=43.22 Aligned_cols=92 Identities=12% Similarity=0.225 Sum_probs=60.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|+|..|..+|..+... |.. ...+++++|+. .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 45899999999999999988664 420 01368888864 111 0 00112467788876
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
+|++| ++..+ ...+++++.+....+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78777 34333 467788888876556667888888774
No 93
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.83 E-value=0.26 Score=50.45 Aligned_cols=115 Identities=12% Similarity=0.172 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
++.+++..+. +....++.|+|+|..|..+++.+... .++ ++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455665553 34568999999999999988777543 232 678888873 222 2233333321
Q ss_pred --c--cCCCCCHHHHHhccCCcEEEEccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHH
Q 009138 448 --E--HEPVKELVDAVNAIKPTILIGTSGQG---RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEE 510 (542)
Q Consensus 448 --~--~~~~~~L~eaV~~vkPtvLIG~S~~~---g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~aEct~ed 510 (542)
. .....++.|+++. +|++|=++..+ -.|..+++ .+.-.|+.++. |. +-|+.++-
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHHH
Confidence 0 1224689999986 89999766543 13444333 24458888875 65 67887653
No 94
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.75 E-value=0.18 Score=48.96 Aligned_cols=102 Identities=22% Similarity=0.319 Sum_probs=61.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccC---CCc-----cCCchhchhhcc----
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS---SRL-----ESLQHFKKPWAH---- 447 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~---~R~-----~~l~~~k~~fA~---- 447 (542)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+ .. +|. +++-..|..-+.
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v-~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 92 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDV-HLSNLQRQILFTTEDIDRPKSQVSQQRLT 92 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBC-CGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCc-ccccCCCCccCChhhCCCHHHHHHHHHHH
Confidence 56788999999999999999999764 76 68999998732 21 110 011111111110
Q ss_pred c-c---------CCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 009138 448 E-H---------EPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 497 (542)
Q Consensus 448 ~-~---------~~~--~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL 497 (542)
. . ... .++.+.++. .|++|-++. ..-++..+...+.....|+|.+-
T Consensus 93 ~~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d--~~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 93 QLNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTD--NMATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCS--SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCC--CHHHHHHHHHHHHHhCCCEEEEe
Confidence 0 0 011 245666765 899987654 22345566666655678888754
No 95
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.69 E-value=1.1 Score=45.84 Aligned_cols=139 Identities=15% Similarity=0.146 Sum_probs=90.5
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~---------------------g~~L~d~riv~~GAGsAg~GIA~ll~~~ 405 (542)
..|+|.|--- +.+|=-+++-+|+..|-. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 4566666532 235556788888877642 567899999999999999999999853
Q ss_pred HHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 009138 406 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 481 (542)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 481 (542)
.|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- .-+.|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 364 6888887531 000 01111112589999987 898884432 236899999
Q ss_pred HHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 009138 482 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 519 (542)
Q Consensus 482 v~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 519 (542)
++.|. +..|+.=.|.-..--|-.-.+|++ .|+.
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i 282 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEALR--SKHL 282 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSE
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCc
Confidence 99996 677888787643223333334443 4654
No 96
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.58 E-value=0.16 Score=51.71 Aligned_cols=127 Identities=17% Similarity=0.264 Sum_probs=77.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.....-..+..+++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888764 54 257999998411111000013222 1332211001233566776
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 463 KPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 463 kPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+ | +| -+++++.|+++++..+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~~g~p~~rviG~gt 151 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHhcCCCHHHeeeecc
Confidence 89887555443 1 23 368889999999999999999996 456666666542 134566654
No 97
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.53 E-value=0.21 Score=49.89 Aligned_cols=120 Identities=19% Similarity=0.344 Sum_probs=69.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccC----CchhchhhccccC-CCCCHHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHE-PVKELVDAV 459 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~----l~~~k~~fA~~~~-~~~~L~eaV 459 (542)
||.|+|||..|.++|..++.. |. ...++++|.+- ++.+. +.+. .++..... ...+ .+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~i~~~d-~~~~ 65 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHG-TPFTRRANIYAGD-YADL 65 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHH-GGGSCCCEEEECC-GGGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhh-hhhcCCcEEEeCC-HHHh
Confidence 799999999999999988653 53 14799999751 11010 1100 01110000 0123 3556
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEe
Q 009138 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFAS 523 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt--~GraIfAS 523 (542)
+. +|++|=+-..+.. .-+++++.|.++++.-+|+-.|||... ..+-+.+.+ ...-+|.+
T Consensus 66 ~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~---~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 66 KG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV---LTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp TT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH---HHHHHHHHHTCCTTTEEEC
T ss_pred CC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH---HHHHHHHHhCCChhhEEee
Confidence 65 8988855444331 127888999888888888889999742 233343433 23345555
Q ss_pred CC
Q 009138 524 GS 525 (542)
Q Consensus 524 Gs 525 (542)
|.
T Consensus 141 ~t 142 (319)
T 1a5z_A 141 GT 142 (319)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 98
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.53 E-value=1 Score=45.87 Aligned_cols=119 Identities=15% Similarity=0.234 Sum_probs=77.3
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHh
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 408 (542)
.|.|.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|+|..|..+|+.+..
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~---- 185 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA---- 185 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT----
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH----
Confidence 345554332 23444567777776553 2467899999999999999999998854
Q ss_pred hcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++.+|+.. .. .. .+ ....+|.|+++. .|+++=.- ...+.++++.++.
T Consensus 186 -~G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 186 -FDC-------PISYFSRSK----KP---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp -TTC-------CEEEECSSC----CT---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred -CCC-------EEEEECCCc----hh---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhc
Confidence 364 588888642 11 11 01 112478888886 89877442 1236788888888
Q ss_pred HHcCCCCcEEEEcCCCC
Q 009138 485 MASLNEKPIIFSLSNPT 501 (542)
Q Consensus 485 Ma~~~erPIIFaLSNPt 501 (542)
|. +..+|.-.|.-.
T Consensus 241 mk---~gailIn~srG~ 254 (333)
T 3ba1_A 241 LG---PKGVLINIGRGP 254 (333)
T ss_dssp HC---TTCEEEECSCGG
T ss_pred CC---CCCEEEECCCCc
Confidence 85 566777777643
No 99
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.52 E-value=0.32 Score=47.36 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-.|++.+++..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888888877552 5 368888874
No 100
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.51 E-value=0.19 Score=50.59 Aligned_cols=121 Identities=21% Similarity=0.341 Sum_probs=72.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCcc----CCchhchhhccccC-CCCCHHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHE-PVKELVDA 458 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~----~l~~~k~~fA~~~~-~~~~L~ea 458 (542)
.||.|+|||..|..+|-+++. .|+ -..++++|.+ .++.+ +|.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887754 243 2579999975 22211 111111 1221100 0123 566
Q ss_pred HhccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEE
Q 009138 459 VNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFA 522 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt--~GraIfA 522 (542)
+++ +|++|=+.+.+..- -+++++.|.++++.-+|+-.|||. -.+.+-+++.+ .-.-+|.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG 146 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIG 146 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEE
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEec
Confidence 776 99998665544211 268889999999999999999996 45555555543 1123566
Q ss_pred eCC
Q 009138 523 SGS 525 (542)
Q Consensus 523 SGs 525 (542)
+|.
T Consensus 147 ~gt 149 (318)
T 1y6j_A 147 SGT 149 (318)
T ss_dssp CTT
T ss_pred cCC
Confidence 654
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=91.47 E-value=0.088 Score=56.32 Aligned_cols=126 Identities=15% Similarity=0.220 Sum_probs=78.7
Q ss_pred CceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-c-c-cCC---CCCH
Q 009138 383 DQRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H-E-HEP---VKEL 455 (542)
Q Consensus 383 d~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-~-~-~~~---~~~L 455 (542)
..||.|+|||+. +.++|..|+.. ..+++ -..++|+|.+- ++.+.+.+....+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665441 01432 25799999853 22111111112221 1 1 111 2588
Q ss_pred HHHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 456 VDAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
.+++++ +|++|=..+.++. .=+++++.|.++|+..+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999997 9999866655321 1358899999999999999999997
Q ss_pred CCCCCCHHHHhcccCCcEEEEeC
Q 009138 502 SQSECTAEEAYTWSQGRAIFASG 524 (542)
Q Consensus 502 ~~aEct~edA~~wt~GraIfASG 524 (542)
-+..+-+++.+...-+|.+|
T Consensus 175 ---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 ---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp ---HHHHHHHHHHSTTCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 35555666665443577765
No 102
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.44 E-value=0.34 Score=47.27 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=58.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc--cccccCCCccCCchhchhhc--------cccCCCC-
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWA--------HEHEPVK- 453 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs--kGLi~~~R~~~l~~~k~~fA--------~~~~~~~- 453 (542)
||.|+|+|..|..+|..|... | .+++++|+ +.- .++..++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988664 5 36888887 321 0111111000 0001113
Q ss_pred -CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 454 -ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 454 -~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
++.|+++. +|++| ++... ...+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67888875 88877 33333 36788888887633466888899865
No 103
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=91.28 E-value=0.53 Score=46.89 Aligned_cols=113 Identities=14% Similarity=0.166 Sum_probs=65.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
++.+++..+. +....+|.|+|+|..|..+++.+... .|+ ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 45667999999999999999888653 243 578888863 111 2222222210
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCH
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTA 508 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erPIIFaLS--NPt~~aEct~ 508 (542)
......++.|+++. +|++|=+... ..+|.++ ...+..+|+.++ +|. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854331 1233331 123566888885 354 356654
No 104
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.20 E-value=0.095 Score=52.96 Aligned_cols=132 Identities=16% Similarity=0.209 Sum_probs=74.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch----h---hccc-------
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----P---WAHE------- 448 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~----~---fA~~------- 448 (542)
-.||.|+|+|..|.+||..++.+ |. +++++|.+- + .++..+. . ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998763 64 588888741 1 1111110 0 0000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 009138 449 --------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 519 (542)
Q Consensus 449 --------~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 519 (542)
.....++.|+++. +|++| .+.... .+.+++++.+.++...-.|++ ||=. =..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS---~i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSS---CLLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCS---SCCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCC---ChHHHHHHHhcCCCC
Confidence 0113588999987 88887 333222 255677777776655444443 4422 144555444443322
Q ss_pred EEEeCCCCCCcccCC-EEEccc
Q 009138 520 IFASGSPFDPFEYGD-NVFVPG 540 (542)
Q Consensus 520 IfASGspf~pv~~~g-~~~~pg 540 (542)
=|.-+-||.|+.+.+ ..+.||
T Consensus 140 r~ig~Hp~~P~~~~~lveiv~g 161 (319)
T 2dpo_A 140 QCIVAHPVNPPYYIPLVELVPH 161 (319)
T ss_dssp GEEEEEECSSTTTCCEEEEEEC
T ss_pred CeEEeecCCchhhcceEEEeCC
Confidence 244556888886532 334444
No 105
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.14 E-value=1.2 Score=44.48 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=78.6
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
.++|.|--- +.+|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~----- 163 (307)
T 1wwk_A 89 GIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA----- 163 (307)
T ss_dssp TCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----
T ss_pred CcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----
Confidence 455555322 23444578888887662 3467899999999999999999998864
Q ss_pred cCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAM 485 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~M 485 (542)
.|+ +++.+|+.. .. + ..+ .+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|
T Consensus 164 ~G~-------~V~~~d~~~----~~-~---~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~m 222 (307)
T 1wwk_A 164 LGM-------NILLYDPYP----NE-E---RAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLM 222 (307)
T ss_dssp TTC-------EEEEECSSC----CH-H---HHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHS
T ss_pred CCC-------EEEEECCCC----Ch-h---hHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcC
Confidence 364 688888641 10 0 010 11 0112378898886 898885421 2367888999988
Q ss_pred HcCCCCcEEEEcCC
Q 009138 486 ASLNEKPIIFSLSN 499 (542)
Q Consensus 486 a~~~erPIIFaLSN 499 (542)
. +..++.=.|.
T Consensus 223 k---~ga~lin~ar 233 (307)
T 1wwk_A 223 K---KTAILINTSR 233 (307)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCeEEEECCC
Confidence 6 5678887777
No 106
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.11 E-value=0.29 Score=45.93 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=57.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEE-EcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~l-vDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+- .....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988653 53 3554 5542 122222222221 1112345666765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
+|++| ++..+ ...+++++.++. .+..+|+.++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 33333 466777777765 45669999999873
No 107
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.04 E-value=0.32 Score=49.02 Aligned_cols=104 Identities=21% Similarity=0.299 Sum_probs=65.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh-ccccCCCCCHHHHHhc
Q 009138 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-AHEHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f-A~~~~~~~~L~eaV~~ 461 (542)
.||+|.| +|..|..++..|+. .|+ ...++++|.+-- .+...+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888743 343 246999996421 00000011100000 0000001367889987
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 462 IKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 462 vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
.|++|=+.+.+. ..+++++++|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899986665443 24678889998889899999999997
No 108
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.01 E-value=0.27 Score=48.01 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 367 LAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-.|++.+++..|..++..+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999999998888887652 4 468888874
No 109
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.85 E-value=0.18 Score=47.97 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=60.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 2377787631 1121111111 00112466677
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
++. +|++|=+ ..... .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~a-v~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIVS-LKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEEC-CCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEEe-cCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 8888843 33333 388888887544 567888888754
No 110
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=90.85 E-value=0.25 Score=51.95 Aligned_cols=124 Identities=13% Similarity=0.177 Sum_probs=78.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHh-hcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc---CCCCCHHHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISK-QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH---EPVKELVDAV 459 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~-~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~---~~~~~L~eaV 459 (542)
.||.|+|||+. ++..++..+.. ..++. -..|+|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 23442 36799999753 22110111111111111 1125788999
Q ss_pred hccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 009138 460 NAIKPTILIGTSGQGR---------------TF-------------------TKEVVEAMASLNEKPIIFSLSNPTSQSE 505 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~erPIIFaLSNPt~~aE 505 (542)
++ +|++|=..++++ ++ =.++++.|.++| ..+|+-.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999998777653 22 358999999999 99999999997 3
Q ss_pred CCHHHHhcccCCcEEEEeC
Q 009138 506 CTAEEAYTWSQGRAIFASG 524 (542)
Q Consensus 506 ct~edA~~wt~GraIfASG 524 (542)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 5555666776443577765
No 111
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.75 E-value=3.4 Score=43.59 Aligned_cols=138 Identities=14% Similarity=0.210 Sum_probs=93.7
Q ss_pred cCCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 009138 349 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (542)
Q Consensus 349 r~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 407 (542)
+..|+|||--- ..+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~--- 177 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAES--- 177 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHH---
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 45788998643 34556678888888763 2567899999999999999999998754
Q ss_pred hhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 009138 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 483 (542)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 483 (542)
.|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.-- .-+.|+++.++
T Consensus 178 --~G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 178 --LGM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp --TTC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred --CCC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 365 688888741 1 1100 01 124689999987 898884321 23689999999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 009138 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 519 (542)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 519 (542)
.|. +..++.=.|.-..--|-.-.+|++ .|+.
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i 263 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVLQ--EGHL 263 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSE
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCc
Confidence 996 678888888754333333345554 5664
No 112
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=90.63 E-value=1.5 Score=44.97 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=89.0
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 406 (542)
..|.|.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 4667766432 23444578888887753 2567999999999999999999998853
Q ss_pred HhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 009138 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 482 (542)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv 482 (542)
.|+ +++.+|+... . ....+.. ......+|.|+++. .|+++=.- ..-+.|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 364 5888886421 0 1111100 01123578998887 88887331 22358889999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 483 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
+.|. +..+|.=.|+-..--|-.-.+|++ .|+.-
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ 276 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIG 276 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCcc
Confidence 9886 677888777643223333334543 35543
No 113
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.61 E-value=1.4 Score=45.23 Aligned_cols=131 Identities=17% Similarity=0.194 Sum_probs=76.6
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 407 (542)
.|+|.|--- ..+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 116 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~--- 192 (340)
T 4dgs_A 116 NIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA--- 192 (340)
T ss_dssp TCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT---
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH---
Confidence 455555321 23455577777777652 2467899999999999999999998853
Q ss_pred hhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 009138 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 483 (542)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 483 (542)
.|+ +++.+|+.. ... . .+ ....+|.|+++. .|+++=.-- .-+.++++.++
T Consensus 193 --~G~-------~V~~~dr~~----~~~--~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~ 246 (340)
T 4dgs_A 193 --FGM-------SVRYWNRST----LSG--V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQ 246 (340)
T ss_dssp --TTC-------EEEEECSSC----CTT--S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHH
T ss_pred --CCC-------EEEEEcCCc----ccc--c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHh
Confidence 364 688888642 110 0 11 113589999987 899884321 23678889999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
.|. +..++.=.|.-..--|-.-.+|++
T Consensus 247 ~mk---~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 247 ALG---PEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp HTT---TTCEEEECSCC-------------
T ss_pred cCC---CCCEEEECCCCcccCHHHHHHHHH
Confidence 886 567888888754334444445553
No 114
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.58 E-value=0.21 Score=50.76 Aligned_cols=126 Identities=14% Similarity=0.237 Sum_probs=75.6
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC---CCHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVD 457 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~---~~L~e 457 (542)
++..||.|+|||..|.++|.+|+. .|+ + .+.++|.+-=..++-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 556799999999999999988865 365 2 5999997521111000012221 1122111111 344 7
Q ss_pred HHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 009138 458 AVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIF 521 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~G--raIf 521 (542)
++++ +|++|=+.+.+ |. | -+++++.|.++++..+|+-.|||. .....-+++.++= +-+|
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv---d~~t~~~~k~sg~p~~rvi 146 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL---DAMVWALQKFSGLPAHKVV 146 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc---HHHHHHHHHhcCCCHHHEE
Confidence 8887 89887554433 31 1 257778888899999999999996 4444555554421 3466
Q ss_pred EeC
Q 009138 522 ASG 524 (542)
Q Consensus 522 ASG 524 (542)
++|
T Consensus 147 G~~ 149 (324)
T 3gvi_A 147 GMA 149 (324)
T ss_dssp ECC
T ss_pred eec
Confidence 666
No 115
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.44 E-value=0.23 Score=42.84 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998876 376 47788864
No 116
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.40 E-value=0.12 Score=51.82 Aligned_cols=125 Identities=19% Similarity=0.322 Sum_probs=73.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCC-CCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~-~~~L~eaV~~v 462 (542)
.||.|+|||..|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+. .+|.++..- ..+ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGS-YGDLEG- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECC-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECC-HHHhCC-
Confidence 3899999999999988876542 43 258999998520000000012211 123221000 123 667776
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 463 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. -.+.+-+++.+. -.-+|.+|.
T Consensus 68 -aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 142 (310)
T 2xxj_A 68 -ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYALSGLPPGRVVGSGT 142 (310)
T ss_dssp -EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHTCCGGGEEECTT
T ss_pred -CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHHcCCCHHHEEecCc
Confidence 8999855544422 2256777888889999999999996 445555655431 124666654
No 117
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.38 E-value=0.19 Score=50.15 Aligned_cols=125 Identities=18% Similarity=0.241 Sum_probs=71.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccC--CCCCHHHHHhc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE--PVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~--~~~~L~eaV~~ 461 (542)
.||.|+|||..|.++|-.++. .|+ . +++++|.+-=-.++...+|.+...+...... ...++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999998754 353 1 3999997510000000012111111111100 01456 77877
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 462 IKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 462 vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
.|++|=+.+.+.. .-+++.+.+.++++.-+|+-.|||. -...+-+++.+. -.-+|++|.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv---~~~t~~~~~~~~~~~~rviG~gt 145 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL---DAMTYLAAEVSGFPKERVIGQAG 145 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEEECCH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch---HHHHHHHHHHcCCCHHHEEECCc
Confidence 8999866544421 2247788888889888888889997 233444555321 123566653
No 118
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.34 E-value=2.9 Score=41.78 Aligned_cols=117 Identities=16% Similarity=0.196 Sum_probs=73.9
Q ss_pred CCCceeec-CCcc--hHHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 350 TTHLVFND-DIQG--TASVVLAGLISAMKFL-----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 350 ~~~~~FND-DiQG--TaaVvLAgll~Alr~~-----------------g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
..+++.|- +... +|=-+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 46777774 3332 3334788888876631 236889999999999999999998854
Q ss_pred cCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 485 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~M 485 (542)
.|+ +++.+|+..- . . . .....+|.|+++. .|+++=.- ..-+.|+++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~--~-------~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK--E-------G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC--C-------S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc--c-------c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 364 5888887532 0 0 0 0122456777765 67766432 22346666666666
Q ss_pred HcCCCCcEEEEcCC
Q 009138 486 ASLNEKPIIFSLSN 499 (542)
Q Consensus 486 a~~~erPIIFaLSN 499 (542)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 4 4566666665
No 119
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.34 E-value=2.1 Score=43.24 Aligned_cols=137 Identities=10% Similarity=0.103 Sum_probs=88.3
Q ss_pred eeeecCCCccHHHHHHHHcCCCceeecCCcc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEE
Q 009138 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQG---TASVVLAGLISAMKF-------------------LGGSLADQRFLF 388 (542)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~~~~~FNDDiQG---TaaVvLAgll~Alr~-------------------~g~~L~d~riv~ 388 (542)
|+.--.+..|- ++-.--+..+.|.|---.. +|=-+++.+|+..|- .|..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555544442 2211223567777753333 444578888887761 234688899999
Q ss_pred eCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEE
Q 009138 389 LGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILI 468 (542)
Q Consensus 389 ~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLI 468 (542)
+|.|..|..+|+.+.. .|+ +++.+|+.. .. . + + .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~-~-~---~-~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHG-----MGA-------TVIGEDVFE----IK-G-I---E-DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CC-S-C---T-TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHH-----CCC-------EEEEECCCc----cH-H-H---H-hccc----cCCHHHHHhh--CCEEE
Confidence 9999999999998864 364 588888742 11 1 1 1 1111 2378898886 89888
Q ss_pred Ecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 469 GTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 469 G~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
=.- ...+.|+++.++.|. +..++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 641 234688999998886 5678888875
No 120
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.31 E-value=0.56 Score=49.85 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=65.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
.++..+|.|+|+|..|.++|..|+.. |. +++++|+. . +..+...+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35678999999999999999998653 53 57777763 1 112222111100 01123589999
Q ss_pred Hhcc-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 459 VNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 459 V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
++.+ ++|++| ++...+..++++++.+...- +..||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 488877 55555567889998887654 456888899965
No 121
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.27 E-value=2 Score=43.02 Aligned_cols=117 Identities=18% Similarity=0.200 Sum_probs=80.4
Q ss_pred CCCceeecCCc---chHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDIQ---GTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 350 ~~~~~FNDDiQ---GTaaVvLAgll~Alr~~---------------------g~~L~d~riv~~GAGsAg~GIA~ll~~~ 405 (542)
..+.+.|---- .+|=-+++.+|+..|-. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 45777775432 34444788888876531 457889999999999999999998854
Q ss_pred HHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHH
Q 009138 406 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEV 481 (542)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteev 481 (542)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 364 688888642 11 11 1 13578898887 89888652 2245788888
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 009138 482 VEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 482 v~~Ma~~~erPIIFaLSNP 500 (542)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88775 67788888874
No 122
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.14 E-value=0.2 Score=49.10 Aligned_cols=105 Identities=17% Similarity=0.298 Sum_probs=61.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc-hhchhhcccc--CCCCCHHHHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAHEH--EPVKELVDAV 459 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~-~~k~~fA~~~--~~~~~L~eaV 459 (542)
..||.|+|||+.|..+|..|... |. ..+++++|++---..+ ..++ .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 36899999999999999888652 53 1479999986310000 0010 0111121110 000132 456
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
+. +|++|=+...+.. +-+++++.|+++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 54 8988754433321 11188899988888889999999973
No 123
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.13 E-value=1.3 Score=42.99 Aligned_cols=119 Identities=17% Similarity=0.157 Sum_probs=71.9
Q ss_pred eecCCCccHHHHHHHHcC------CCceeecCCcchHHHHHHHHHHHHHHh-CCCCCCceEEEeC-cchHHHHHHHHHHH
Q 009138 333 FEDFANHNAFDLLEKYGT------THLVFNDDIQGTASVVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIAL 404 (542)
Q Consensus 333 fEDf~~~nAf~lL~ryr~------~~~~FNDDiQGTaaVvLAgll~Alr~~-g~~L~d~riv~~G-AGsAg~GIA~ll~~ 404 (542)
++-+.-..+.+++++-+. ...+| .|..|.- .--.|++.+++.. +.++++.+++|.| +|.+|.++|..+++
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 343444466777776552 22344 3455532 2456777788776 7889999999999 89999999988865
Q ss_pred HHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc---------cccCCCCCHHHHHhccCCcEEEEccCCC
Q 009138 405 EISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---------HEHEPVKELVDAVNAIKPTILIGTSGQG 474 (542)
Q Consensus 405 ~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA---------~~~~~~~~L~eaV~~vkPtvLIG~S~~~ 474 (542)
.|. +++++|++ ..+ +....+.+. -+.....++.++++. .|+||=.++.+
T Consensus 142 -----~G~-------~V~i~~R~----~~~---~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~DvlVn~ag~g 199 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK----LDK---AQAAADSVNKRFKVNVTAAETADDASRAEAVKG--AHFVFTAGAIG 199 (287)
T ss_dssp -----TTC-------EEEEEESS----HHH---HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT--CSEEEECCCTT
T ss_pred -----CcC-------EEEEEECC----HHH---HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh--CCEEEECCCcc
Confidence 353 48888874 122 111111111 011111245667775 79999887654
No 124
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=90.11 E-value=1.1 Score=45.08 Aligned_cols=112 Identities=20% Similarity=0.199 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
++.+++..+.. ....++.|+|+|..|-.+++.+... .++ ++++++|+. .++ ...+.+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999999988877653 232 678888873 222 2233333321
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 009138 448 ---EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTAE 509 (542)
Q Consensus 448 ---~~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLS--NPt~~aEct~e 509 (542)
+.. ..++.|++ . .|++|=++..+ -.|..+++ .+.-.|+.++ +|. +-|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899999 5 89998766533 23443322 3566888883 455 6788765
No 125
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.86 E-value=0.36 Score=47.15 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=69.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-------------------
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------------------- 444 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~------------------- 444 (542)
.||.|+|+|..|.+||..++.+ |. +++++|++- + .++..+..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~~----~---~~~~~~~~i~~~l~~~~~~g~~~~~~~ 76 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQTE----D---ILAKSKKGIEESLRKVAKKKFAENPKA 76 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTSSSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECCH----H---HHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence 5899999999999999998753 53 688888741 1 01110000
Q ss_pred --hcc-----ccCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHcCCC-CcEEEEcCCCCCCCCCCHHHHhccc
Q 009138 445 --WAH-----EHEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNE-KPIIFSLSNPTSQSECTAEEAYTWS 515 (542)
Q Consensus 445 --fA~-----~~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~e-rPIIFaLSNPt~~aEct~edA~~wt 515 (542)
|.. ......++.|+++. +|++|= +.... ...+++++.+.+... ..||. ||-.+ ..+++..++.
T Consensus 77 ~~~~~~~~~~~i~~~~~~~~~~~~--aD~Vi~-avp~~~~~~~~v~~~l~~~~~~~~iv~--s~ts~---i~~~~l~~~~ 148 (302)
T 1f0y_A 77 GDEFVEKTLSTIATSTDAASVVHS--TDLVVE-AIVENLKVKNELFKRLDKFAAEHTIFA--SNTSS---LQITSIANAT 148 (302)
T ss_dssp HHHHHHHHHHTEEEESCHHHHTTS--CSEEEE-CCCSCHHHHHHHHHHHTTTSCTTCEEE--ECCSS---SCHHHHHTTS
T ss_pred chhhHHHHHhceEEecCHHHhhcC--CCEEEE-cCcCcHHHHHHHHHHHHhhCCCCeEEE--ECCCC---CCHHHHHHhc
Confidence 000 00112578888876 898883 33221 124567777765543 44554 44321 2344443333
Q ss_pred CCcEEEEeCCCCCCccc-CCEEEccc
Q 009138 516 QGRAIFASGSPFDPFEY-GDNVFVPG 540 (542)
Q Consensus 516 ~GraIfASGspf~pv~~-~g~~~~pg 540 (542)
....-|.-.-||.|+.. ....+.+|
T Consensus 149 ~~~~~~~g~h~~~P~~~~~~~~i~~g 174 (302)
T 1f0y_A 149 TRQDRFAGLHFFNPVPVMKLVEVIKT 174 (302)
T ss_dssp SCGGGEEEEEECSSTTTCCEEEEECC
T ss_pred CCcccEEEEecCCCcccCceEEEeCC
Confidence 21111344567777765 33444444
No 126
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.86 E-value=0.2 Score=50.76 Aligned_cols=127 Identities=17% Similarity=0.223 Sum_probs=76.4
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC--CCHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDA 458 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~--~~L~ea 458 (542)
++..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=..++-..+|.+.. .+......+ .+-.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHH
Confidence 345799999999999999988765 355 2 69999985211100000122211 111111111 122477
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEEE
Q 009138 459 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIFA 522 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~G--raIfA 522 (542)
+++ +|++|=+.+.+ |. .-+++++.+.++++..+|+-.|||. -...+-+++.++= +-+|+
T Consensus 71 ~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~sg~p~~rviG 145 (321)
T 3p7m_A 71 LEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL---DIMVNMLQKFSGVPDNKIVG 145 (321)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEEE
T ss_pred HCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHhcCCCHHHEEe
Confidence 887 89887555444 21 1257778888899999999999996 4455556555421 34677
Q ss_pred eC
Q 009138 523 SG 524 (542)
Q Consensus 523 SG 524 (542)
+|
T Consensus 146 ~~ 147 (321)
T 3p7m_A 146 MA 147 (321)
T ss_dssp EC
T ss_pred ec
Confidence 77
No 127
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.68 E-value=0.2 Score=50.76 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=74.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC--CCHHHHHhcc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~--~~L~eaV~~v 462 (542)
||.|+|||..|.++|..|+.. |+ -..+.++|.+-=..++-..+|.+. ..+......+ .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 54 257999998531111100012221 1121111111 245677877
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeC
Q 009138 463 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (542)
Q Consensus 463 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASG 524 (542)
+|++|=+.+.+ |- +-+++++.++++++..+|+-.|||. .....-+++.++ -+-+|++|
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHHhcCCChHHEEeec
Confidence 89887554433 21 2257778888999999999999996 555555655432 13345555
No 128
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.68 E-value=0.26 Score=49.92 Aligned_cols=127 Identities=16% Similarity=0.231 Sum_probs=77.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc--cccCCCccCCchhchhhccccCCC--CCHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--LIVSSRLESLQHFKKPWAHEHEPV--KELV 456 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG--Li~~~R~~~l~~~k~~fA~~~~~~--~~L~ 456 (542)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 4567999999999999999988652 54 2789999861 1111111113221 2333211111 1224
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEE
Q 009138 457 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAI 520 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraI 520 (542)
++++. .|++|=+.+.+ |- .-+++++.++++++..+|+-.|||. .....-+++.++ -+-+
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k~sg~p~~rv 148 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFKEAGFPKERV 148 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGE
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHHhcCCChHHE
Confidence 66776 89887555443 21 2357888888999999999999996 555555665431 1335
Q ss_pred EEeC
Q 009138 521 FASG 524 (542)
Q Consensus 521 fASG 524 (542)
|++|
T Consensus 149 iG~g 152 (315)
T 3tl2_A 149 IGQS 152 (315)
T ss_dssp EECC
T ss_pred Eeec
Confidence 5554
No 129
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.53 E-value=0.33 Score=48.33 Aligned_cols=100 Identities=22% Similarity=0.314 Sum_probs=61.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccC----Cchhchhhcccc--CCCCCHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEH--EPVKELVDA 458 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~----l~~~k~~fA~~~--~~~~~L~ea 458 (542)
||.|+|||..|.++|..++.. ++ -.+++++|.+- ++-+. +.+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999987652 21 25799999862 22111 111100010110 01135655
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 459 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
++. +|++|=+.+.+ |- +-+++.+.|+++++..+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 765 89887554432 21 1157778888888888988899996
No 130
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.41 E-value=1.3 Score=45.86 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=84.0
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~---------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 406 (542)
.|.|.|--- ..+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+..
T Consensus 120 GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-- 197 (365)
T 4hy3_A 120 GIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-- 197 (365)
T ss_dssp CCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT--
T ss_pred CeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh--
Confidence 455554321 23455677777777662 2346889999999999999999998743
Q ss_pred HhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHH
Q 009138 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVV 482 (542)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv 482 (542)
.|+ +++.+|+.. .. + .... ..-...+|.|+++. .|+++=. ...-+.|+++.+
T Consensus 198 ---fG~-------~V~~~d~~~----~~-~---~~~~----~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l 253 (365)
T 4hy3_A 198 ---FRA-------RIRVFDPWL----PR-S---MLEE----NGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAF 253 (365)
T ss_dssp ---SCC-------EEEEECSSS----CH-H---HHHH----TTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHH
T ss_pred ---CCC-------EEEEECCCC----CH-H---HHhh----cCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHH
Confidence 354 678777641 10 0 0111 11112479999987 8998832 233468999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 009138 483 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 519 (542)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 519 (542)
+.|. +..|+.=.|.-..--|-.-.+|++ .|+.
T Consensus 254 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i 285 (365)
T 4hy3_A 254 SSMR---RGAAFILLSRADVVDFDALMAAVS--SGHI 285 (365)
T ss_dssp HTSC---TTCEEEECSCGGGSCHHHHHHHHH--TTSS
T ss_pred hcCC---CCcEEEECcCCchhCHHHHHHHHH--cCCc
Confidence 9996 677888777643223333334443 4553
No 131
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.32 E-value=0.32 Score=48.22 Aligned_cols=98 Identities=17% Similarity=0.339 Sum_probs=57.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch-hhcc----ccCCCCCHHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH----EHEPVKELVD 457 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~-~fA~----~~~~~~~L~e 457 (542)
+.||.|+|+|+.|..+|..|..+ | .+++++|+.. .+.+.+..... .|-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 46999999999999999998763 5 3688888741 11011111000 0000 0011235666
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 009138 458 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 503 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~ 503 (542)
++. +|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 554 78666 33333 567788877665 55688889997654
No 132
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=89.14 E-value=2.3 Score=42.99 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=60.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + ..+..-+. ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV-N---VEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH-H---HHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h---hhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 353 688888742 11 0 01100011 1378888
Q ss_pred HhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 459 VNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 459 V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
++. +|+++=.-. ..+.++++.++.|. +. +|.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874322 12578888888885 45 7766664
No 133
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.12 E-value=1.6 Score=44.88 Aligned_cols=144 Identities=13% Similarity=0.159 Sum_probs=87.8
Q ss_pred eeeecCCCccH-HHHHHHHcCCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceE
Q 009138 331 IQFEDFANHNA-FDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRF 386 (542)
Q Consensus 331 IqfEDf~~~nA-f~lL~ryr~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~ri 386 (542)
|+.-..+..|- .+.+.+.+..|.|.|--- ..+|=-+++.+|+..|- .+..|.+.++
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 66666655553 233333333677777432 23444578888888762 3678999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcE
Q 009138 387 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI 466 (542)
Q Consensus 387 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtv 466 (542)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... . ....+ .+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAEE-KV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHHH-HT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHHH-hc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998853 364 23888886421 0 11000 00 00112468888875 788
Q ss_pred EEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 467 LIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 467 LIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
++=.--. .++|+++.++.|. +..+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 7743221 2577888887775 56677777763
No 134
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.10 E-value=0.22 Score=50.68 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=77.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCC-CCCHHHHHhc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~-~~~L~eaV~~ 461 (542)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|....-. ..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988763 54 258999997410000000013332 333311000 1122456776
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeCC
Q 009138 462 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASGS 525 (542)
Q Consensus 462 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASGs 525 (542)
+|++|=+.+.+ |- .-+++++.++++++..+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~~g~p~~rviG~gt 148 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKFSGLPKERVIGSGT 148 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHhcCCCHHHEEeecc
Confidence 89887554433 31 1267788888999999999999996 456666666542 134666654
Q ss_pred C
Q 009138 526 P 526 (542)
Q Consensus 526 p 526 (542)
-
T Consensus 149 ~ 149 (326)
T 3pqe_A 149 T 149 (326)
T ss_dssp H
T ss_pred c
Confidence 3
No 135
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=89.09 E-value=3.7 Score=41.55 Aligned_cols=138 Identities=14% Similarity=0.117 Sum_probs=88.8
Q ss_pred CCCceeecCCcc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDIQG---TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (542)
Q Consensus 350 ~~~~~FNDDiQG---TaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 407 (542)
..|.|.|---.. +|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 166 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKG--- 166 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 467777754333 344478888887651 3467899999999999999999998864
Q ss_pred hhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 009138 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 483 (542)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 483 (542)
.|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 167 --~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 167 --FGA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp --TTC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 364 688888752 11 1 11 1121 2378898886 898885421 23578899999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
.|. +..++.=.|.-.---|-.-.+|++ +|+.-
T Consensus 222 ~mk---~ga~lIn~srg~~vd~~aL~~aL~--~g~i~ 253 (333)
T 1dxy_A 222 LMK---PGAIVINTARPNLIDTQAMLSNLK--SGKLA 253 (333)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHHH--hCCcc
Confidence 986 567888777643222322334443 45543
No 136
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.09 E-value=0.46 Score=46.96 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=58.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc--------cccCCCccCCchhchhhccccCCCCCH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--------LIVSSRLESLQHFKKPWAHEHEPVKEL 455 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG--------Li~~~R~~~l~~~k~~fA~~~~~~~~L 455 (542)
.||.|+|||+-|..+|..|.+. | .+++++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 5899999999999999988653 4 3688888753 111110 000010 0 000111355
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009138 456 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 502 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 502 (542)
.++.+ .+|++| ++... ..++++++.++..- +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55543 378877 55544 45668999987543 4567888999764
No 137
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.09 E-value=0.33 Score=47.53 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...|++.+++..+.++++.+++|+|||.+|.++|..++. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999999777777666633 22 68888874
No 138
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.06 E-value=0.62 Score=47.44 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=71.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc-cccCCCc---cCCch------------hchhhc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG-LIVSSRL---ESLQH------------FKKPWA 446 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG-Li~~~R~---~~l~~------------~k~~fA 446 (542)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+= .+...+. ..++. .....+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~ 73 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLS 73 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHh
Confidence 36899999999999999988764 75 578888531 0000000 00000 000011
Q ss_pred cccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeC
Q 009138 447 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (542)
Q Consensus 447 ~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASG 524 (542)
+ -....+|.|+++. .|.+|=.---.=-..+++.+.+.++++.-.||| ||=. =..+.+.-+.+. .|+|..
T Consensus 74 ~-i~~~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIla-SNTS---sl~is~ia~~~~~p~r~ig~-- 144 (319)
T 3ado_A 74 L-ISSCTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSS---CLLPSKLFTGLAHVKQCIVA-- 144 (319)
T ss_dssp T-EEEECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCS---SCCHHHHHTTCTTGGGEEEE--
T ss_pred h-cccccchHhHhcc--CcEEeeccccHHHHHHHHHHHHHHHhhhcceee-hhhh---hccchhhhhhccCCCcEEEe--
Confidence 0 0112467788776 666664322222356777777777777777775 3322 233333322222 344443
Q ss_pred CCCCCccc-CCEEEccc
Q 009138 525 SPFDPFEY-GDNVFVPG 540 (542)
Q Consensus 525 spf~pv~~-~g~~~~pg 540 (542)
-||.|+.+ .=..+.||
T Consensus 145 HffNP~~~m~LVEiv~g 161 (319)
T 3ado_A 145 HPVNPPYYIPLVELVPH 161 (319)
T ss_dssp EECSSTTTCCEEEEEEC
T ss_pred cCCCCccccchHHhcCC
Confidence 57777755 33344443
No 139
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.88 E-value=1.3 Score=45.46 Aligned_cols=96 Identities=13% Similarity=0.231 Sum_probs=62.4
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV 459 (542)
++..||.|+|.|..|..+|..|... | -+++++|+. .++ +. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---VQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---HH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---HH----HHHHCCCEEeCCHHHHH
Confidence 4567999999999999999988763 5 357777763 111 11 12221 12346899998
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009138 460 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (542)
Q Consensus 460 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 501 (542)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 873 568887 343344 778888887654 3567888888743
No 140
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.84 E-value=5.1 Score=41.85 Aligned_cols=120 Identities=18% Similarity=0.213 Sum_probs=81.5
Q ss_pred cCCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 009138 349 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (542)
Q Consensus 349 r~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 407 (542)
+..|+|||--- +.+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+..
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~--- 166 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAES--- 166 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHH---
Confidence 35688888644 34555588888888763 2567999999999999999999998854
Q ss_pred hhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 009138 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 483 (542)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~ 483 (542)
.|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ..-+.|+++.++
T Consensus 167 --~G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 167 --LGM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp --TTC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 364 6888887421 0010 01 113478888876 78877432 223578888888
Q ss_pred HHHcCCCCcEEEEcCC
Q 009138 484 AMASLNEKPIIFSLSN 499 (542)
Q Consensus 484 ~Ma~~~erPIIFaLSN 499 (542)
.|. +..++.=.|.
T Consensus 222 ~mk---~ga~lIN~aR 234 (404)
T 1sc6_A 222 LMK---PGSLLINASR 234 (404)
T ss_dssp HSC---TTEEEEECSC
T ss_pred hcC---CCeEEEECCC
Confidence 885 5667777775
No 141
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.83 E-value=1 Score=45.76 Aligned_cols=121 Identities=21% Similarity=0.234 Sum_probs=77.1
Q ss_pred CCceeecC-C--cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcC
Q 009138 351 THLVFNDD-I--QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (542)
Q Consensus 351 ~~~~FNDD-i--QGTaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G 411 (542)
.|++.|-- . +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .|
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKH-----FG 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHH-----TT
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHh-----CC
Confidence 46666542 2 22444577777777663 3568999999999999999999999854 36
Q ss_pred CChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHc
Q 009138 412 MPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMAS 487 (542)
Q Consensus 412 ~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~ 487 (542)
+ +++.+|+.. +. ..... . .....+|.|+++. .|+++=.- ..-+.|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~---~~----~~~~~----~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG---RE----RAGFD----Q-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC---CC----CTTCS----E-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh---HH----hhhhh----c-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888754 11 11111 0 1123568888876 78777431 223567777777775
Q ss_pred CCCCcEEEEcCCC
Q 009138 488 LNEKPIIFSLSNP 500 (542)
Q Consensus 488 ~~erPIIFaLSNP 500 (542)
+..|+.=.|.-
T Consensus 222 --~gailIN~aRG 232 (324)
T 3hg7_A 222 --PGAILFNVGRG 232 (324)
T ss_dssp --TTCEEEECSCG
T ss_pred --CCcEEEECCCc
Confidence 56677766653
No 142
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.76 E-value=0.26 Score=49.37 Aligned_cols=119 Identities=16% Similarity=0.326 Sum_probs=72.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCcc----CCchhchhhccccCCC---CCHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELVD 457 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~----~l~~~k~~fA~~~~~~---~~L~e 457 (542)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++.+ ++.+...++... ..+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVD-IRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCC-CCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCC-eEEEECCCH-H
Confidence 689999999999999777543 54 369999985 22211 121111111111 111 355 6
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEE
Q 009138 458 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIF 521 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIf 521 (542)
++++ +|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. -...+-+++.+. -.-+|
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~~~~p~~rvi 138 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV---DAMTYVMYKKTGFPRERVI 138 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHHhcCCChhhEE
Confidence 7877 9999866555531 2457888888889998877789997 344445555321 12356
Q ss_pred EeCC
Q 009138 522 ASGS 525 (542)
Q Consensus 522 ASGs 525 (542)
++|.
T Consensus 139 G~gt 142 (308)
T 2d4a_B 139 GFSG 142 (308)
T ss_dssp ECCH
T ss_pred Eecc
Confidence 6653
No 143
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.73 E-value=0.85 Score=45.08 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=64.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCC-CccCCchhc--hhhccc---cCC---CC
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFK--KPWAHE---HEP---VK 453 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~-R~~~l~~~k--~~fA~~---~~~---~~ 453 (542)
..||.|+|+|..|.++|..+...-... . ....+++++|+..-.... +.+.+.... ..|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 468999999999999999997752110 0 001368888875321100 001111100 001000 001 24
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 502 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 502 (542)
++.|+++. +|++| ++... ...+++++.++... +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 78888885 89877 44433 57789999887653 4678889999654
No 144
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.73 E-value=0.77 Score=43.49 Aligned_cols=122 Identities=15% Similarity=0.207 Sum_probs=69.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999988763 531 02468888873 1 1122222211 11123578888887
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCCCCCCCHHHHhccc-CCcEEEEeCCCCCCccc
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTSQSECTAEEAYTWS-QGRAIFASGSPFDPFEY 532 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~~aEct~edA~~wt-~GraIfASGspf~pv~~ 532 (542)
+|++| ++..+ ...+++++.+..+. +..+|...++-.+ .+..-++. .+.. +...-|+.|+..
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~-----~~~l~~~~~~~~~-~v~~~p~~p~~~ 126 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS-----IESTENAFNKKVK-VVRVMPNTPALV 126 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC-----HHHHHHHHCSCCE-EEEEECCGGGGG
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC-----HHHHHHHhCCCCc-EEEEeCChHHHH
Confidence 88887 44433 45677887776543 4557777777653 22222222 2222 233357777765
No 145
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.63 E-value=0.93 Score=42.26 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=26.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+...||.|+|+|..|..+|..+... | .+++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 456678999999999999999988653 5 368888764
No 146
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.55 E-value=1 Score=45.96 Aligned_cols=128 Identities=19% Similarity=0.170 Sum_probs=70.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccccc----CCCc--cCCchhchhhccccCCCCCHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV----SSRL--ESLQHFKKPWAHEHEPVKELV 456 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~----~~R~--~~l~~~k~~fA~~~~~~~~L~ 456 (542)
..||.|+|+|+-|.++|..|... | .+++++|++--.. ..+. ..++..+ +........++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 46899999999999999998653 5 3577777641100 0000 0011111 000001125788
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCCCCCCCHHHHhc-cc-CCcEEEEeCCCCC
Q 009138 457 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTSQSECTAEEAYT-WS-QGRAIFASGSPFD 528 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~~aEct~edA~~-wt-~GraIfASGspf~ 528 (542)
|+++. +|++| ++... .+.+++++.++.+. +..+|..++|-.........+.++ +. .-.+.+-+|-.|.
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a 165 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLA 165 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCH
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHH
Confidence 99886 88877 44333 47788888887654 466888888865322122323221 11 1235566665543
No 147
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=88.49 E-value=1.6 Score=44.36 Aligned_cols=135 Identities=18% Similarity=0.316 Sum_probs=85.6
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHh
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 408 (542)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~---- 158 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASA---- 158 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHH----
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHh----
Confidence 4677777653 23444577777777642 2667999999999999999999998854
Q ss_pred hcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++.+|+..- . .+.....+ ...+|.|+++. .|+++=.- ..-+.|+++.++.
T Consensus 159 -~G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 159 -LGM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp -TTC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred -CCC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 365 6888887531 1 11111111 12468888886 88887431 2246788888888
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 485 MASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
|. +..++.=.|.-..--|-.-.+|++
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH
Confidence 85 567887777643223333334443
No 148
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.25 E-value=4.9 Score=41.13 Aligned_cols=121 Identities=12% Similarity=0.205 Sum_probs=82.0
Q ss_pred CCCceeecCCc---chHHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDIQ---GTASVVLAGLISAMKF----------L----------GGSLADQRFLFLGAGEAGTGIAELIALEI 406 (542)
Q Consensus 350 ~~~~~FNDDiQ---GTaaVvLAgll~Alr~----------~----------g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 406 (542)
..|.|.|---- .+|=-+++-+|+..|- . |..|.+.++.|+|.|..|..+|+.+..
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~-- 169 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSA-- 169 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHH--
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhh--
Confidence 36788876333 3455668888877751 2 346789999999999999999998854
Q ss_pred HhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHH
Q 009138 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVV 482 (542)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv 482 (542)
.|+ +++.+|+.. .. . .. ..+ ...+|.|+++. .|+++=.-- .-+.|+++.+
T Consensus 170 ---~G~-------~V~~~d~~~----~~-~-~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 170 ---MGA-------KVIAYDVAY----NP-E-FE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ---TTC-------EEEEECSSC----CG-G-GT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCh----hh-h-hh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 364 688888752 10 0 11 111 12389999987 898885432 2468999999
Q ss_pred HHHHcCCCCcEEEEcCCCC
Q 009138 483 EAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt 501 (542)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9996 677888777643
No 149
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=88.21 E-value=0.58 Score=46.70 Aligned_cols=125 Identities=20% Similarity=0.292 Sum_probs=76.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc--cccccCCCccCCchhchhhccccCCC----CCHHH
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEPV----KELVD 457 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs--kGLi~~~R~~~l~~~k~~fA~~~~~~----~~L~e 457 (542)
||+|.|| |..|..++..|+. .|+ ...++|+|. +---.++-..+|.+.. ++....-.+ .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence 8999999 9999998887753 243 246899996 2100000000122211 222100011 13788
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEE
Q 009138 458 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIF 521 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt--~GraIf 521 (542)
++++ .|++|=+.+.+.. .+++++++|.+++ +.+|+--|||. ....+-+++.+ .-.-+|
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~~~~p~~rvi 144 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVDSKFERNQVF 144 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHHHCCCTTSEE
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHhhCcChhcEE
Confidence 8887 8999877765531 4668899999999 99999999996 45555565542 122467
Q ss_pred EeCCC
Q 009138 522 ASGSP 526 (542)
Q Consensus 522 ASGsp 526 (542)
++|.-
T Consensus 145 G~gt~ 149 (313)
T 1hye_A 145 GLGTH 149 (313)
T ss_dssp ECTTH
T ss_pred EeCcc
Confidence 77643
No 150
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.17 E-value=0.5 Score=47.62 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=34.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 478999999999999999999999886 75 6899999863
No 151
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=88.14 E-value=0.5 Score=49.52 Aligned_cols=97 Identities=18% Similarity=0.296 Sum_probs=53.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChh-hccCeEEEEcccc-------cccCCCcc--CCchhchhhccccCCCC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLE-ETRKKIWLVDSKG-------LIVSSRLE--SLQHFKKPWAHEHEPVK 453 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e-eAr~~i~lvDskG-------Li~~~R~~--~l~~~k~~fA~~~~~~~ 453 (542)
.||.|+|||+=|+++|..+.+.-.. .+.- +-.=.+|..|..= .|-..|.. .|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875321 1100 0012577665431 12222211 12222211 0001125
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN 489 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~ 489 (542)
+|.|+++. .|++|= ++|-.|-.++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~--avPs~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF--NIPHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEE--CSCGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEE--ECChhhhHHHHHHhcccc
Confidence 78999987 777652 223357788888887543
No 152
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.14 E-value=0.85 Score=48.79 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=62.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch-hhc-cccCCCCCHHHHHhc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~-~fA-~~~~~~~~L~eaV~~ 461 (542)
.+|.|+|+|..|.++|..|+.. |. +++++|+. .+ .++...+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QS---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SH---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998763 64 57777763 11 1111111 000 011123588898876
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 462 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
+ +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 488777 45545456788888887654 356888898854
No 153
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=88.10 E-value=2.9 Score=42.53 Aligned_cols=138 Identities=16% Similarity=0.149 Sum_probs=89.0
Q ss_pred CCceeecC-C--cchHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHh
Q 009138 351 THLVFNDD-I--QGTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (542)
Q Consensus 351 ~~~~FNDD-i--QGTaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 408 (542)
.|+|.|-- . ..+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+..
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~---- 162 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLA---- 162 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHH----
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHH----
Confidence 56666642 2 23455678888877752 3567899999999999999999999864
Q ss_pred hcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++.+|+.. . . . .. ...-...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 163 -~G~-------~V~~~d~~~----~--~-~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 163 -FGM-------KVLCYDVVK----R--E-D--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp -TTC-------EEEEECSSC----C--H-H--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred -CcC-------EEEEECCCc----c--h-h--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 264 688888742 1 1 0 00 001112359999987 89887442 2346899999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
|. +..||.=.|.-..--|-.-.+|++ .|+.-
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~ 250 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAYQ--RGKFS 250 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHHH--TTCEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 96 677888777644223333344543 46543
No 154
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.99 E-value=1.8 Score=38.27 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=60.1
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHh
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 460 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~ 460 (542)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +.+.+...+..+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8888888888765 25 36888877521 10111011111111 2222246788888
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 461 AIKPTILIGTSGQGRT---------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g~---------Fteevv~~Ma~~~erPIIFaLS 498 (542)
. +|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 6 8999988775432 2567888887766667887544
No 155
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.88 E-value=0.63 Score=49.74 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=67.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc-------------ccCCCccCCchhc--hhhccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL-------------IVSSRLESLQHFK--KPWAHE 448 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL-------------i~~~R~~~l~~~k--~~fA~~ 448 (542)
.||.|+|+|..|.+||..++.+ |. +++++|.+-= +.+++ ++..+ ...++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~~e~a~~~i~~~l~~~~~~G~---l~~~~~~~~~~~- 118 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRNEQRCKQELEVMYAREKSFKR---LNDKRIEKINAN- 118 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHHHHHHHHHHHHHHHHHTTS---CCHHHHHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECcHHHHHHHHHHHHHHHHHcCC---CCHHHHHHHhcc-
Confidence 6899999999999999998763 64 6888887411 00000 11100 00000
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCC
Q 009138 449 HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD 528 (542)
Q Consensus 449 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~ 528 (542)
.....++ ++++. +|++|=+-...-...+++++.+.+..+.--||+ ||=.+ +.+.+.-+.+.-..=|.-.-||.
T Consensus 119 i~~t~dl-~al~~--aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIla-snTSs---l~i~~ia~~~~~p~r~iG~Hffn 191 (460)
T 3k6j_A 119 LKITSDF-HKLSN--CDLIVESVIEDMKLKKELFANLENICKSTCIFG-TNTSS---LDLNEISSVLRDPSNLVGIHFFN 191 (460)
T ss_dssp EEEESCG-GGCTT--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEE-ECCSS---SCHHHHHTTSSSGGGEEEEECCS
T ss_pred eEEeCCH-HHHcc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEE-ecCCC---hhHHHHHHhccCCcceEEEEecc
Confidence 0012345 34554 777763222111244566666666665555553 55332 33444333332222255566777
Q ss_pred Cccc-CCEEEccc
Q 009138 529 PFEY-GDNVFVPG 540 (542)
Q Consensus 529 pv~~-~g~~~~pg 540 (542)
|+.+ .-..+.||
T Consensus 192 Pv~~m~LvEIv~g 204 (460)
T 3k6j_A 192 PANVIRLVEIIYG 204 (460)
T ss_dssp STTTCCEEEEECC
T ss_pred hhhhCCEEEEEeC
Confidence 7765 22334443
No 156
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.59 E-value=4.7 Score=40.70 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=90.0
Q ss_pred cCCCceeecCCcc---hHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 009138 349 GTTHLVFNDDIQG---TASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (542)
Q Consensus 349 r~~~~~FNDDiQG---TaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~ 407 (542)
+..+.|.|----. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 3567888754333 344478888888762 2356889999999999999999998864
Q ss_pred hhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 009138 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 483 (542)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 483 (542)
.|+ +++.+|+.. . .. + ..++. ...+|.|+++. .|+++=.-- ..+.++++.++
T Consensus 168 --~G~-------~V~~~d~~~----~-~~-~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N-PE-L----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C-HH-H----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c-hh-H----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 364 688888742 1 11 1 11221 12378999986 898885421 23578888998
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
.|. +..++.-.|.-..--|-.-.+|++ +|+.-
T Consensus 224 ~mk---~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 255 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGPLVDTDAVIRGLD--SGKIF 255 (333)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 886 567888787743223333334443 35543
No 157
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.45 E-value=0.46 Score=47.94 Aligned_cols=117 Identities=20% Similarity=0.245 Sum_probs=66.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc----ccCCCCCHHHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVDAV 459 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~----~~~~~~~L~eaV 459 (542)
.||+++|||-.|--+|+.|.+ ..++.++|... +.++.. ++++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHH
Confidence 379999999998888776632 13577777531 112211 12222 223335688888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCc
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 530 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv 530 (542)
++ .|++|-+ .|..+..+++++-.+... . ++-+|--.......-++|.+ .| +.+..|.-++|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~~~~~~~~l~~~a~~--~g-~~~i~~~G~~PG 137 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSFMPENPLELRDEAEK--AQ-VTIVFDAGFAPG 137 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCCCSSCGGGGHHHHHH--TT-CEEECCCBTTTB
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeeccchhhhhhhhhhcc--CC-ceeeecCCCCCc
Confidence 86 8998854 455688899888765433 3 55566433222223345544 35 344455556663
No 158
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=87.40 E-value=4.4 Score=41.16 Aligned_cols=97 Identities=14% Similarity=0.066 Sum_probs=61.7
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHH
Q 009138 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (542)
Q Consensus 378 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 457 (542)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....+. + ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~~-~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEKA-L--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHHH-H--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHhh-c--CcEEeCCHHH
Confidence 5679999999999999999999988522 364 6888887421 1 111110 0 0011136888
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 458 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 458 aV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
+++. .|+++=.-- ..+.++++.++.|. +..||.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8876 888774421 23577888888775 45677666653
No 159
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.29 E-value=0.48 Score=47.09 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=66.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc---ccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL---IVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL---i~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ...... ++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24300000137999997420 000000 12111112322212225688999
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 86 9999977766532 3567788888876 666888899996
No 160
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.29 E-value=0.35 Score=49.93 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=33.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 57889999999999999999999875 76 6899999863
No 161
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.29 E-value=1 Score=42.57 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=57.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhc---hhhccccCCCCCHHHHHhc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK---KPWAHEHEPVKELVDAVNA 461 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k---~~fA~~~~~~~~L~eaV~~ 461 (542)
||.|+|+|..|..+|..|... | .+++++|+.- .+.+.+.... ..+-.. -.. +..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTA-NDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEE-SCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eee-cCccccCC
Confidence 799999999999999998653 5 3688888742 2111121100 000000 001 23567765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 462 IKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 462 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
+|++| ++.... -.+++++.++... +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 89887 443332 3689999888643 456777789865
No 162
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.20 E-value=3.6 Score=41.14 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEc
Q 009138 362 TASVVLAGLISAMKFL----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (542)
Q Consensus 362 TaaVvLAgll~Alr~~----------------g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvD 425 (542)
+|=-+++-+|+..|-. ...|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445666677665521 1458899999999999999999998653 64 688888
Q ss_pred ccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 426 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 426 skGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
+.. .. ... ++ ...+|.|+++. .|+++=.- ..-+.++++.++.|. +..+|.=.|.-
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG 211 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARA 211 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehh
Confidence 752 11 111 11 23578888886 78777432 223578888888885 56788777763
No 163
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.85 E-value=0.79 Score=46.23 Aligned_cols=110 Identities=11% Similarity=0.199 Sum_probs=62.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCC-CccCCchhc--hhhc------cccCCCCC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFK--KPWA------HEHEPVKE 454 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~-R~~~l~~~k--~~fA------~~~~~~~~ 454 (542)
.||.|+|+|..|.++|..|..+-... . .-..+++++|+..-+... +.+.+.... ..|- .......+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999997752110 0 001468888875321000 001011100 0000 00011246
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----C-CCCcEEEEcCCCCC
Q 009138 455 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----L-NEKPIIFSLSNPTS 502 (542)
Q Consensus 455 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~-~erPIIFaLSNPt~ 502 (542)
+.|+++. +|++| ++... ...+++++.++. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 8888876 88777 33323 577888888875 3 34668889998653
No 164
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.83 E-value=0.53 Score=49.82 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhcCCCceeeeecCCCccHHHHHHHHc-CCCcee--ecCCcchHHHHHHHHHHHHHHhC--------CCCC
Q 009138 314 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYG-TTHLVF--NDDIQGTASVVLAGLISAMKFLG--------GSLA 382 (542)
Q Consensus 314 idefv~av~~~fGp~~lIqfEDf~~~nAf~lL~ryr-~~~~~F--NDDiQGTaaVvLAgll~Alr~~g--------~~L~ 382 (542)
+..+++.+...| ++ |.|+-+......++-++|. ..+|++ |+..-+.+.....-|+..+.... ..-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 566666666677 43 5555444445567888886 466644 66566667666666776654321 0123
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+|||+|||.||+..|..+.+ .|+ ++.++|.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4679999999999999988765 354 56677653
No 165
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=86.60 E-value=2.8 Score=43.84 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=69.4
Q ss_pred chHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCe
Q 009138 361 GTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 420 (542)
Q Consensus 361 GTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~ 420 (542)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .|+ +
T Consensus 149 ~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~ 216 (393)
T 2nac_A 149 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------H 216 (393)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------E
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------E
Confidence 3444567777776652 2567999999999999999999998753 253 5
Q ss_pred EEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEE
Q 009138 421 IWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFS 496 (542)
Q Consensus 421 i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFa 496 (542)
++.+|+... . .... +.+ ......+|.|+++. .|+++=.- ...++|+++.++.|. +..+|.=
T Consensus 217 V~~~d~~~~----~---~~~~-~~~--G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN 281 (393)
T 2nac_A 217 LHYTDRHRL----P---ESVE-KEL--NLTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVN 281 (393)
T ss_dssp EEEECSSCC----C---HHHH-HHH--TCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEE
T ss_pred EEEEcCCcc----c---hhhH-hhc--CceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEE
Confidence 888886421 0 0000 000 00112467777775 78776432 223577777777775 4667776
Q ss_pred cCC
Q 009138 497 LSN 499 (542)
Q Consensus 497 LSN 499 (542)
.|.
T Consensus 282 ~aR 284 (393)
T 2nac_A 282 TAR 284 (393)
T ss_dssp CSC
T ss_pred CCC
Confidence 665
No 166
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.36 E-value=0.6 Score=51.79 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=33.7
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67889999999999999999999875 76 6899999873
No 167
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.34 E-value=1.1 Score=47.22 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=63.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
..+|.|+|+|..|..+|..|... |. +++++|+. . +.+....+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988653 53 57777763 1 112222221100 01123588998875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 462 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
. ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 488887 55545456778888776543 456888899864
No 168
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.33 E-value=0.41 Score=43.76 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=59.0
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc---c--ccCCCCCHHHH
Q 009138 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---H--EHEPVKELVDA 458 (542)
Q Consensus 385 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA---~--~~~~~~~L~ea 458 (542)
||+|+| +|..|..+|+.+.. .| .+++++|++- ++ ++..++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999998854 25 2688888641 11 111111110 0 011 2478888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 502 (542)
++. +|++|=+.. + ...+++++.+.+..+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 887 899884433 3 245677777654334678999999764
No 169
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.30 E-value=0.91 Score=44.80 Aligned_cols=48 Identities=6% Similarity=0.197 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677666654 56899999999999999888754 364 578888874
No 170
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.21 E-value=0.25 Score=44.38 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=53.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++- ++.+.+......... +......|.++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~~----~~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIRE----EAAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESCH----HHHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECCH----HHHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 35677899999999999999988542 04 3588888741 111111111001111 11111123333
Q ss_pred --HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 459 --VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 459 --V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
++ ++|++|=++... .-+..++....+.++...|++.+|
T Consensus 101 ~~~~--~ad~vi~~~~~~-~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 101 LDTG--HVKLVLLAMPHH-QGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CSCC--CCCEEEECCSSH-HHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCC--CCCEEEEeCCCh-HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 33 589998655422 334455555555554445555544
No 171
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=86.20 E-value=2 Score=43.45 Aligned_cols=139 Identities=13% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCCceeecCC----cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 350 TTHLVFNDDI----QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 350 ~~~~~FNDDi----QGTaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4666665321 34566778888888763 2567899999999999999999998854
Q ss_pred cCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 485 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~M 485 (542)
.|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ..-+.|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 364 5777876421 111111 01 011468888876 78877431 12357888888877
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 009138 486 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 519 (542)
Q Consensus 486 a~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 519 (542)
. +..|+.=.|.-..--|-.-.+|++ .|+.
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i 248 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKL 248 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSE
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCc
Confidence 5 567777776643223333334443 3543
No 172
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=86.11 E-value=2.3 Score=41.18 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=63.6
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh----chhhcc-ccCCCCC
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKE 454 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~----k~~fA~-~~~~~~~ 454 (542)
++..+|+|.|| |-.|..+++.|++. |. .-+++.+|+...- .....+... +..+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 99999999888764 52 2367777765321 111111111 111111 2222346
Q ss_pred HHHHHhccCCcEEEEccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 455 LVDAVNAIKPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 455 L~eaV~~vkPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 498 (542)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88889888899999887754321 356788888766666888543
No 173
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=86.00 E-value=0.91 Score=46.89 Aligned_cols=96 Identities=23% Similarity=0.338 Sum_probs=54.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-----------ccCCC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----------EHEPV 452 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-----------~~~~~ 452 (542)
.||+|+|||-.|..+|+.|++ .|- .-.++.++|++ .++ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999999777777776643 231 00368888874 111 2222222211 11222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 453 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 453 ~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.++.++++..++|++|=+++. .+..+++++..+. ..++| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~-g~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRT-GVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHH-TCCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHh-CCCEE-EecC
Confidence 468889998899999977653 2456676665443 34444 2544
No 174
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.88 E-value=2.3 Score=42.16 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=61.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc-CCCCCHHHHHh
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDAVN 460 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~-~~~~~L~eaV~ 460 (542)
+..||.|+|+|..|.++|..|... |.. ...+++++|+. .++ +.+.. +.... .-..+..|+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~----l~~~G~~~~~~~~e~~~ 83 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSA----LRKMGVKLTPHNKETVQ 83 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHH----HHHHTCEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHH----HHHcCCEEeCChHHHhc
Confidence 345899999999999999988653 531 11368888763 110 01111 11111 11246788887
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 009138 461 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 502 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt~ 502 (542)
. +|++| ++..+ ...+++++.++.. .+..+|.-++|..+
T Consensus 84 ~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 84 H--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp H--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred c--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 6 78777 44433 4677888887653 34568888999874
No 175
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.85 E-value=1.2 Score=42.91 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=54.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 36899999999999999988653 32 13688888641 1111111100000 012345566664
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNP 500 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNP 500 (542)
+|++| ++..+... +++++.+... .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 77776 44434333 7777777654 345566666663
No 176
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.78 E-value=0.71 Score=43.19 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
++-...||.|+|+|..|..+|+.+.. .|. +++++|++- ++ +.. ++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~~----~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TAR----LFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HHH----HSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HHH----HHHcCCceecHHHH
Confidence 33345689999999999999998864 253 578887641 11 111 11110011267787
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
++. +|++|= +..+. ..+++++ ++...+..+|.-+||+.
T Consensus 81 ~~~--~DvVi~-av~~~-~~~~v~~-l~~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 81 VSS--PEVIFV-AVFRE-HYSSLCS-LSDQLAGKILVDVSNPT 118 (215)
T ss_dssp TTS--CSEEEE-CSCGG-GSGGGGG-GHHHHTTCEEEECCCCC
T ss_pred HhC--CCEEEE-CCChH-HHHHHHH-HHHhcCCCEEEEeCCCc
Confidence 775 788773 33232 3445553 33222556888888876
No 177
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.74 E-value=4 Score=40.99 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=77.3
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~---------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~ 405 (542)
..+.|.|--- +.+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 4566666543 23444478888887663 2356889999999999999999998853
Q ss_pred HHhhcCCChhhccCeEEEEcc-cccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHH
Q 009138 406 ISKQTNMPLEETRKKIWLVDS-KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKE 480 (542)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDs-kGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Ftee 480 (542)
.|+ +++.+|+ .. .. . ..+..-+ ....++.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G~-------~V~~~d~~~~----~~-~---~~~~~g~---~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FDM-------DIDYFDTHRA----SS-S---DEASYQA---TFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TTC-------EEEEECSSCC----CH-H---HHHHHTC---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CCC-------EEEEECCCCc----Ch-h---hhhhcCc---EEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 253 6888887 41 10 0 0000001 112378888876 888774321 23577788
Q ss_pred HHHHHHcCCCCcEEEEcCC
Q 009138 481 VVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 481 vv~~Ma~~~erPIIFaLSN 499 (542)
.++.|. +..+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 887775 5667777776
No 178
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.61 E-value=0.93 Score=37.86 Aligned_cols=97 Identities=16% Similarity=0.206 Sum_probs=51.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh----hcc-ccCCCCCHHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----WAH-EHEPVKELVD 457 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~----fA~-~~~~~~~L~e 457 (542)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++- + .+...+.. +.. +......|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~~----~---~~~~~~~~~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDIDK----D---ICKKASAEIDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCH----H---HHHHHHHHCSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH----H---HHHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 3589999999999999988854 24 3688888741 1 11111111 111 1111112332
Q ss_pred H-HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 458 A-VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 458 a-V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
+ ++ ++|++|=+.... ..+..+.+.........||.-.+||.
T Consensus 65 ~~~~--~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~ 106 (140)
T 1lss_A 65 AGIE--DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARISEIE 106 (140)
T ss_dssp TTTT--TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred cCcc--cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEecCHh
Confidence 2 33 589988765432 22222333334455567777666664
No 179
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.49 E-value=1 Score=47.68 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=60.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-----cccCCCCCHHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----HEHEPVKELVDAV 459 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-----~~~~~~~~L~eaV 459 (542)
||.|+|+|..|..+|..|... |. +++++|+.. ++ ++...+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 53 577888641 11 111111100 0011235788988
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009138 460 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (542)
Q Consensus 460 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 501 (542)
+.+ ++|++| ++...+...+++++.+... .+..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488887 4444444567888877653 3456888899865
No 180
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=85.45 E-value=0.95 Score=45.50 Aligned_cols=114 Identities=18% Similarity=0.221 Sum_probs=70.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCC--CCHHHHHhcc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~--~~L~eaV~~v 462 (542)
||.|+|||..|..+|-+|+.. |+ -..+.|+|.+-=..++-.-+|.+- .+|....... .+--+++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999999888653 54 256999997531111111123332 1222111111 122355776
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 009138 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 514 (542)
Q Consensus 463 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~w 514 (542)
.|++|=+.+.+.. .-+++++++++++++.||+-.|||. ..+..-+++.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv---d~~t~i~~k~ 131 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc---hhhHHhhHHH
Confidence 8999866665522 1246788888999999999999996 4555556654
No 181
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.44 E-value=0.53 Score=48.27 Aligned_cols=118 Identities=15% Similarity=0.293 Sum_probs=71.0
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc-CCCCCHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDA 458 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~-~~~~~L~ea 458 (542)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966544 365 246999997411011100013322 231100 011578899
Q ss_pred HhccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhccc
Q 009138 459 VNAIKPTILIGTSGQG---R-----------TFTKEVVEAMASLNEKPI-IFSLSNPTSQSECTAEEAYTWS 515 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~---g-----------~Fteevv~~Ma~~~erPI-IFaLSNPt~~aEct~edA~~wt 515 (542)
+++ +|++|=+.+.+ | ..-+++++.+++++..-+ |+-.|||. ..+..-|++.+
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv---d~~t~i~~k~s 140 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA---DITGLVTLIYS 140 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH---HHHHHHHHHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch---HHHHHHHHHHc
Confidence 997 89988554433 2 123567778888998885 88899996 45555555543
No 182
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.32 E-value=7.8 Score=38.93 Aligned_cols=136 Identities=17% Similarity=0.219 Sum_probs=73.8
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccC
Q 009138 358 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 437 (542)
Q Consensus 358 DiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~ 437 (542)
+.++.....++..+.|++..+.+ .+++++|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554445566666677655533 46799999999877766555432 464 478877753
Q ss_pred Cchhchhhccc-------cCCCCCHHHHHhc---c---CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC--
Q 009138 438 LQHFKKPWAHE-------HEPVKELVDAVNA---I---KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS-- 502 (542)
Q Consensus 438 l~~~k~~fA~~-------~~~~~~L~eaV~~---v---kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~-- 502 (542)
+.+..+|+. .....++.+.++. . +.|++|=+++.+ ..-++.++.++. .=-|.-+..+..
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~~---~G~vv~~G~~~~~~ 290 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAKA---GGTVVILGVLPQGE 290 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECSCCCTTC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhcc---CCEEEEEeccCCCC
Confidence 122223321 1112466666664 1 578998877633 233455555553 222333443332
Q ss_pred CCCCCHHHHhcccCCcEEEEe
Q 009138 503 QSECTAEEAYTWSQGRAIFAS 523 (542)
Q Consensus 503 ~aEct~edA~~wt~GraIfAS 523 (542)
..+..+.+.+. ++.-|..+
T Consensus 291 ~~~~~~~~~~~--~~~~i~g~ 309 (370)
T 4ej6_A 291 KVEIEPFDILF--RELRVLGS 309 (370)
T ss_dssp CCCCCHHHHHH--TTCEEEEC
T ss_pred ccccCHHHHHh--CCcEEEEe
Confidence 35666666543 45555543
No 183
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.26 E-value=0.74 Score=45.67 Aligned_cols=93 Identities=12% Similarity=0.196 Sum_probs=53.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV 459 (542)
....||.|+|+|..|.++|..+... |. +++++|+. .+ .+. .++.. .....++.|++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~----~~---~~~----~l~~~g~~~~~~~~e~~ 85 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT----PA---RAA----SLAALGATIHEQARAAA 85 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC----HH---HHH----HHHTTTCEEESSHHHHH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC----HH---HHH----HHHHCCCEeeCCHHHHH
Confidence 3457999999999999999998753 53 57777763 11 111 11111 11125778887
Q ss_pred hccCCcEEEEccCCCCCCCHHHHH---HHHcCCCCcEEEEcCC
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVE---AMASLNEKPIIFSLSN 499 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~---~Ma~~~erPIIFaLSN 499 (542)
+. +|++|= +.....-.++++. ......+..+|+-+|+
T Consensus 86 ~~--aDvVi~-~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 86 RD--ADIVVS-MLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp TT--CSEEEE-CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred hc--CCEEEE-ECCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence 76 777762 2221223334442 2222345667777775
No 184
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.24 E-value=0.98 Score=36.59 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=52.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. .+.+.+......+.. +.....++.++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTTT
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHcC
Confidence 4689999999999999988865 351 3688888741 111111100101111 11122457777774
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC
Q 009138 462 IKPTILIGTSGQGRTFTKEVVEAMASL 488 (542)
Q Consensus 462 vkPtvLIG~S~~~g~Fteevv~~Ma~~ 488 (542)
+|++|=+. +..++..+++.+.+.
T Consensus 70 --~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 70 --FDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp --CSEEEECS--CGGGHHHHHHHHHHT
T ss_pred --CCEEEECC--CchhhHHHHHHHHHh
Confidence 99999665 335778888877653
No 185
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.13 E-value=0.71 Score=51.06 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=33.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|++.||+|+|||..|..||+.|+.+ |+ .+|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 477889999999999999999999874 76 689999976
No 186
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=85.01 E-value=4 Score=41.51 Aligned_cols=120 Identities=13% Similarity=0.071 Sum_probs=78.6
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhh
Q 009138 351 THLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (542)
Q Consensus 351 ~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~ 409 (542)
.|+|.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 567777532 23445578888887664 2567999999999999999999998853
Q ss_pred cCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 410 ~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++.+|+.. . +. .+.. .-...+|.|+++. .|+++=.- ..-+.|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 353 688888641 1 10 1111 0012378888886 88887542 1235778888888
Q ss_pred HHcCCCCcEEEEcCCC
Q 009138 485 MASLNEKPIIFSLSNP 500 (542)
Q Consensus 485 Ma~~~erPIIFaLSNP 500 (542)
|. +..++.=.|.-
T Consensus 245 mk---~gailIN~arg 257 (335)
T 2g76_A 245 CK---KGVRVVNCARG 257 (335)
T ss_dssp SC---TTEEEEECSCT
T ss_pred CC---CCcEEEECCCc
Confidence 75 56777777763
No 187
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=84.92 E-value=3.3 Score=42.43 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=89.0
Q ss_pred CCCceeecC--CcchHHHHHHHHHHHHHH----------------------------hCCCCCCceEEEeCcchHHHHHH
Q 009138 350 TTHLVFNDD--IQGTASVVLAGLISAMKF----------------------------LGGSLADQRFLFLGAGEAGTGIA 399 (542)
Q Consensus 350 ~~~~~FNDD--iQGTaaVvLAgll~Alr~----------------------------~g~~L~d~riv~~GAGsAg~GIA 399 (542)
..|+|.|.- -..+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 366666622 224455677778877663 25678899999999999999999
Q ss_pred HHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCC
Q 009138 400 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGR 475 (542)
Q Consensus 400 ~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g 475 (542)
+.+.. .|+ +++.+|+.. .. + .... .......+|.|+++. .|+++=.- ..-+
T Consensus 177 ~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~ 231 (352)
T 3gg9_A 177 GYGRA-----FGM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDALFEQ--SDVLSVHLRLNDETRS 231 (352)
T ss_dssp HHHHH-----TTC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHHHHHH--CSEEEECCCCSTTTTT
T ss_pred HHHHh-----CCC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHHHHhh--CCEEEEeccCcHHHHH
Confidence 98854 364 688888642 00 0 0000 001123589999987 89888532 2346
Q ss_pred CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 476 TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 476 ~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
.|+++.++.|. +..++.=.|.-..--|-.-.+|++
T Consensus 232 li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 232 IITVADLTRMK---PTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp CBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH
T ss_pred hhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH
Confidence 89999999886 678888888744334544556654
No 188
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.58 E-value=0.45 Score=48.60 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=78.7
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc--CCCCCHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVD 457 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e 457 (542)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 257999997411011100012221 1232211 0113454
Q ss_pred HHhccCCcEEEEccCCC---C-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 009138 458 AVNAIKPTILIGTSGQG---R-----T------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIF 521 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~---g-----~------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~G--raIf 521 (542)
++++ .|++|=+.+.+ | + +-+++.+.|+++++..+|+-.|||. .+..+-+++.+.= +-+|
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~sg~p~~rvi 158 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKISGFPKNRVI 158 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHhCCCHHHEE
Confidence 5776 89887444433 2 1 2257888889999999999999996 4566666665521 3466
Q ss_pred EeCCC
Q 009138 522 ASGSP 526 (542)
Q Consensus 522 ASGsp 526 (542)
.+|.-
T Consensus 159 G~gt~ 163 (331)
T 4aj2_A 159 GSGCN 163 (331)
T ss_dssp ECTTH
T ss_pred eeccc
Confidence 77643
No 189
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.42 E-value=0.43 Score=45.74 Aligned_cols=100 Identities=14% Similarity=0.213 Sum_probs=55.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc------ccCCCCCHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHEPVKELVD 457 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~------~~~~~~~L~e 457 (542)
.||.|+|+|..|..+|..|... | .+++++|++.- +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999988653 5 36888887421 10001100000000 0000112222
Q ss_pred HHhcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009138 458 AVNAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (542)
Q Consensus 458 aV~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 501 (542)
+.+.+ ++|++| ++... ...+++++.++.. .+..+|..++|..
T Consensus 68 ~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 68 IDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp CCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred hcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 22211 378777 33333 2568888888764 3467888899865
No 190
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.33 E-value=1.3 Score=43.16 Aligned_cols=92 Identities=14% Similarity=0.180 Sum_probs=54.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+.. .|. +++++|+. .++ +...++. ......++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT----AEK---CDLFIQE---GARLGRTPAEVVST-- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----GGG---GHHHHHT---TCEECSCHHHHHHH--
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHHHHHc---CCEEcCCHHHHHhc--
Confidence 689999999999999998864 253 57888763 111 2111110 00112468888876
Q ss_pred CcEEEEccCCCCCCCHHHHHHH----HcCCCCcEEEEcCCC
Q 009138 464 PTILIGTSGQGRTFTKEVVEAM----ASLNEKPIIFSLSNP 500 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~M----a~~~erPIIFaLSNP 500 (542)
+|++|=+ .....-.++++... ....+..+|+-+||-
T Consensus 87 ~DvVi~a-v~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 87 CDITFAC-VSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp CSEEEEC-CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred CCEEEEe-CCCHHHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence 7887733 22112345555432 123456677778873
No 191
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=84.31 E-value=1.8 Score=42.84 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=71.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc
Q 009138 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (542)
Q Consensus 360 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~ 439 (542)
++.....++.-+.|++-..+- .+++++|.|||..|..++.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 333333444445666622333 88999999999888777665533 363 468888763 111 11
Q ss_pred hhchhhccc--cCCCCCHHHHHhc---cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH-HHHhc
Q 009138 440 HFKKPWAHE--HEPVKELVDAVNA---IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTA-EEAYT 513 (542)
Q Consensus 440 ~~k~~fA~~--~~~~~~L~eaV~~---vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~-edA~~ 513 (542)
..++. |.. .....++.+.++. -++|++|=+++.. ...++.++.|+.. =-|.-++.+....+..+ .+.+
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~- 277 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALIPG---GEARILGIPSDPIRFDLAGELV- 277 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEEEE---EEEEECCCCSSCEEECHHHHTG-
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHhcC---CEEEEEecCCCCceeCcHHHHH-
Confidence 12222 321 1112356666653 3689999877632 2345666666532 23333444433344555 4433
Q ss_pred ccCCcEEEEe
Q 009138 514 WSQGRAIFAS 523 (542)
Q Consensus 514 wt~GraIfAS 523 (542)
.++.-|..+
T Consensus 278 -~~~~~i~g~ 286 (343)
T 2dq4_A 278 -MRGITAFGI 286 (343)
T ss_dssp -GGTCEEEEC
T ss_pred -hCceEEEEe
Confidence 234445443
No 192
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.13 E-value=0.89 Score=44.10 Aligned_cols=91 Identities=13% Similarity=0.217 Sum_probs=54.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~v 462 (542)
.||.|+|+|..|.++|..+... |. +++++|+. .+ .++ .++.. .....++.|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~----~~---~~~----~~~~~g~~~~~~~~~~~~~- 59 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV----QS---AVD----GLVAAGASAARSARDAVQG- 59 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS----HH---HHH----HHHHTTCEECSSHHHHHTT-
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC----HH---HHH----HHHHCCCeEcCCHHHHHhC-
Confidence 5899999999999999998753 53 67877764 11 111 11111 1123578888876
Q ss_pred CCcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVE---AMAS-LNEKPIIFSLSNP 500 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~---~Ma~-~~erPIIFaLSNP 500 (542)
+|++|= +.....-.++++. .+.+ ..+..+|+-+|+-
T Consensus 60 -aDvvi~-~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 60 -ADVVIS-MLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (302)
T ss_dssp -CSEEEE-CCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCC
T ss_pred -CCeEEE-ECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCC
Confidence 787773 2212223445554 3332 3455677777763
No 193
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=84.10 E-value=1.2 Score=43.88 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=55.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDA 458 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~ea 458 (542)
.+...||.|+|+|..|.++|..|... |. +++++|++ .+ .+.. ++.. .....++.|+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~---~~~~----~~~~g~~~~~~~~e~ 62 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS----PG---KAAA----LVAAGAHLCESVKAA 62 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHH----HHHHTCEECSSHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHH----HHHCCCeecCCHHHH
Confidence 34567999999999999999998763 53 57777763 11 1111 1111 1123578888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHH--HHHcCCCCcEEEEcCC
Q 009138 459 VNAIKPTILIGTSGQGRTFTKEVVE--AMASLNEKPIIFSLSN 499 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Fteevv~--~Ma~~~erPIIFaLSN 499 (542)
++. +|++|= +.....-.++++. .+....+..||.-+|+
T Consensus 63 ~~~--aDvVi~-~vp~~~~~~~v~~~~~l~~~~~g~ivid~st 102 (306)
T 3l6d_A 63 LSA--SPATIF-VLLDNHATHEVLGMPGVARALAHRTIVDYTT 102 (306)
T ss_dssp HHH--SSEEEE-CCSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred Hhc--CCEEEE-EeCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence 876 777763 2222222344443 3333345667777775
No 194
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=83.91 E-value=5.6 Score=40.65 Aligned_cols=154 Identities=14% Similarity=0.114 Sum_probs=93.3
Q ss_pred eeeecCCCccHHHHHHHHcCCCceeecCC---cchHHHHHHHHHHHHHHh------------------------C-CCCC
Q 009138 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKFL------------------------G-GSLA 382 (542)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~~~~~FNDDi---QGTaaVvLAgll~Alr~~------------------------g-~~L~ 382 (542)
|+.--.+..|- ++-.--+..|.|.|--- ..+|=-+++.+|+..|-. | ..|.
T Consensus 89 I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~ 167 (347)
T 1mx3_A 89 IVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR 167 (347)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCT
T ss_pred EEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCC
Confidence 65555555442 22222235677777533 344555788888887621 2 4688
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. . . .+.+ ......+|.|+++.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~-~---~~~~--g~~~~~~l~ell~~- 223 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD-G-V---ERAL--GLQRVSTLQDLLFH- 223 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT-T-H---HHHH--TCEECSSHHHHHHH-
T ss_pred CCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h-h---Hhhc--CCeecCCHHHHHhc-
Confidence 9999999999999999998853 364 588888531 11 0 1 0111 01112478888886
Q ss_pred CCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 463 KPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 463 kPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
.|+++=.- ...++++++.++.|. +..+|.=.|+=..--|..-.+|++
T Consensus 224 -aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 224 -SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp -CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH
T ss_pred -CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH
Confidence 88887532 223578888888885 567888777744223333344544
No 195
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.88 E-value=3.6 Score=43.27 Aligned_cols=82 Identities=23% Similarity=0.338 Sum_probs=53.3
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhc
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~ 461 (542)
--|++|+|| |-+|.|-++.+.. .|.. ..++...|.+= ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 468999999 9999999988855 3642 11466666541 01100 01 23444
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLS 498 (542)
.|++||+--. |.++|+|+|+.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 8999998764 56899999999931 445666555
No 196
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=83.82 E-value=0.73 Score=47.19 Aligned_cols=119 Identities=19% Similarity=0.209 Sum_probs=68.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc---cccCCCCCHHHHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---HEHEPVKELVDAV 459 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA---~~~~~~~~L~eaV 459 (542)
+.||+|+|||-+|-.+|+.|++. .++.++|++ .++ +......+. -+.....+|.+++
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~ll 75 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHHH
Confidence 57999999999999999887531 357788774 222 222111121 0112235788888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCCCCCCc
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 530 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGspf~pv 530 (542)
++ +|++|=+. +..+..+++++-.+ ..-.++-+|.-...++.-.++|.+ .| +.+..|.-|+|-
T Consensus 76 ~~--~DvVIn~~--P~~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG-~~~l~g~G~dPG 137 (365)
T 2z2v_A 76 KE--FELVIGAL--PGFLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQ-VTIVFDAGFAPG 137 (365)
T ss_dssp TT--CSCEEECC--CHHHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TT-CEEECSCBTTTB
T ss_pred hC--CCEEEECC--ChhhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cC-CEEEECCCCcch
Confidence 86 89999763 22356677665433 233456677622112222345543 45 345577778774
No 197
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.73 E-value=0.51 Score=48.37 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=76.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc--CCCCCHHHHHh
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 460 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~--~~~~~L~eaV~ 460 (542)
..||.|+|||..|.++|..++.. |+ -..+.++|.+-=..++-..+|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988764 54 247999997311011100012221 2333211 01134544 66
Q ss_pred ccCCcEEEEccCCC---C-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEeC
Q 009138 461 AIKPTILIGTSGQG---R-----T------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (542)
Q Consensus 461 ~vkPtvLIG~S~~~---g-----~------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~--GraIfASG 524 (542)
+ +|++|=+.+.+ | + .-+++++.+.++++..+|+-.|||. .....-+++.++ -+-+|.+|
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~sg~p~~rViG~g 163 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLSGLPMHRIIGSG 163 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEECCT
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHhCCCHHHeeccc
Confidence 5 89988443332 2 1 2356778888999999999999996 566666766552 13456665
Q ss_pred C
Q 009138 525 S 525 (542)
Q Consensus 525 s 525 (542)
.
T Consensus 164 t 164 (330)
T 3ldh_A 164 C 164 (330)
T ss_dssp T
T ss_pred C
Confidence 3
No 198
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.63 E-value=1.3 Score=42.74 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=53.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+... |. +++++|++ .++ +...++. ......++.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS----PEK---AEELAAL---GAERAATPCEVVES-- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----GGG---GHHHHHT---TCEECSSHHHHHHH--
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC----HHH---HHHHHHC---CCeecCCHHHHHhc--
Confidence 4899999999999999998653 53 67777763 111 2111111 11123578888886
Q ss_pred CcEEEEccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCC
Q 009138 464 PTILIGTSGQGRTFTKEVV---EAMAS-LNEKPIIFSLSN 499 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv---~~Ma~-~~erPIIFaLSN 499 (542)
+|++| ++.....-.++++ +.+.+ ..+..+|.-+|+
T Consensus 58 aDvvi-~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 58 CPVTF-AMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp CSEEE-ECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred CCEEE-EEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 78777 3332122344454 33332 235567777775
No 199
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=83.57 E-value=1.1 Score=40.72 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=59.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh-----chhhcc-ccCCCCCHH
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-----KKPWAH-EHEPVKELV 456 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~-----k~~fA~-~~~~~~~L~ 456 (542)
++++|.|| |-.|..+++.|++. .|. ++++++++. + ..++.. +..+.. +..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TDM-------HITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CCC-------EEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CCc-------eEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888888888632 353 688887741 1 012211 111111 222224677
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009138 457 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 498 (542)
++++. +|++|=+.+..+.-++.+++.|.+..-+-||+.=|
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 88875 89999777654333788999998766667887543
No 200
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.55 E-value=2.4 Score=45.48 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=63.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc--CCCCCHHHHHh
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 460 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~--~~~~~L~eaV~ 460 (542)
-.+|.|+|+|..|.++|..|... |. ++++.|+. .+ ..+...+.-+... ....++.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHh
Confidence 35899999999999999998763 64 57777763 11 1222111111110 11368999987
Q ss_pred cc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009138 461 AI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (542)
Q Consensus 461 ~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 501 (542)
.+ +||++| ++...+..++++++.+..+ .+..||.-.||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 53 488777 4444555677888887754 4667888888854
No 201
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.54 E-value=0.79 Score=46.88 Aligned_cols=101 Identities=17% Similarity=0.297 Sum_probs=62.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCC--------ccCCchhchhhccc--
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR--------LESLQHFKKPWAHE-- 448 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R--------~~~l~~~k~~fA~~-- 448 (542)
.+|++.||+++|+|..|..+|+.|+.+ |+ .+|.++|.+=+ ..+. .+++-..|..-|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~V-e~sNL~Rq~l~~~~diG~~Ka~~~~~~l 181 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQI-ENTNLTRQVLFSEDDVGKNKTEVIKREL 181 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBC-CGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcC-cccccccccCCChHHCCChHHHHHHHHH
Confidence 457789999999999999999999876 75 68999998632 1110 00111112111110
Q ss_pred ---cC---------CC--CC-HHHHHhccCCcEEEEccCCCCCC-CHHHHHHHHcCCCCcEEEE
Q 009138 449 ---HE---------PV--KE-LVDAVNAIKPTILIGTSGQGRTF-TKEVVEAMASLNEKPIIFS 496 (542)
Q Consensus 449 ---~~---------~~--~~-L~eaV~~vkPtvLIG~S~~~g~F-teevv~~Ma~~~erPIIFa 496 (542)
.+ .. .+ +.+ ++. .|++|-++. +.- +...+...+.....|.|.+
T Consensus 182 ~~~np~v~v~~~~~~i~~~~~~~~-~~~--~DlVvd~~D--n~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 182 LKRNSEISVSEIALNINDYTDLHK-VPE--ADIWVVSAD--HPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHHCTTSEEEEEECCCCSGGGGGG-SCC--CSEEEECCC--CSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHCCCCeEEEeecccCchhhhhH-hcc--CCEEEEecC--ChHHHHHHHHHHHHHhCCCEEEE
Confidence 01 11 11 445 554 888887653 223 6677777777778999864
No 202
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.46 E-value=2 Score=39.57 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=60.0
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch-hhcc-ccCCCCCH
Q 009138 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH-EHEPVKEL 455 (542)
Q Consensus 379 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~-~fA~-~~~~~~~L 455 (542)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. ++.+.+..... .+.. +.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4678899999998 8888888888865 35 3688887741 11111111111 1111 111 567
Q ss_pred HHHHhccCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcCC
Q 009138 456 VDAVNAIKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.++++. +|++|=+.+.... -+..+++++.+...+-|||.=|-
T Consensus 79 ~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 79 SHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp GGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 777775 9999977765421 14567888876666778886553
No 203
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.34 E-value=7 Score=39.71 Aligned_cols=125 Identities=15% Similarity=0.203 Sum_probs=62.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc--cCCCCCHH
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--HEPVKELV 456 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~--~~~~~~L~ 456 (542)
.--.+++++|+|||..|...+.+... .|. ++++.+|+. ..| ++-.++.=|.. .....++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~----~~~---~~~~~~lGa~~vi~~~~~~~~ 271 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS----EVR---RNLAKELGADHVIDPTKENFV 271 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----HHH---HHHHHHHTCSEEECTTTSCHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHcCCCEEEcCCCCCHH
Confidence 33457899999999887766555432 464 478887753 111 11111111111 11123555
Q ss_pred HHHhc----cCCcEEEEccCCCCCCCHHHHHHHH-cCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEe
Q 009138 457 DAVNA----IKPTILIGTSGQGRTFTKEVVEAMA-SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS 523 (542)
Q Consensus 457 eaV~~----vkPtvLIG~S~~~g~Fteevv~~Ma-~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfAS 523 (542)
+.|+. -++|++|-+++......+..++.+. ...+.=-|..+..+....+......+. ++.-|+.+
T Consensus 272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~--~~~~i~g~ 341 (404)
T 3ip1_A 272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQV--RRAQIVGS 341 (404)
T ss_dssp HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHH--TTCEEEEC
T ss_pred HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhc--cceEEEEe
Confidence 55543 4699999877643223445556651 001222333344443334555555432 34445543
No 204
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=83.02 E-value=3 Score=42.28 Aligned_cols=141 Identities=12% Similarity=0.086 Sum_probs=87.4
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~ 406 (542)
..|.+.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 4566666432 23455677777776652 2456889999999999999999998743
Q ss_pred HhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 009138 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 482 (542)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv 482 (542)
.|+ +++.+|+... . ....+..-+ ...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 6888887531 1 111111111 12378898887 88887542 23468888988
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 009138 483 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 520 (542)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraI 520 (542)
+.|. +..+|.=.|+-...-|-.-.+|++ .|+.-
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~ 256 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAALE--RGQLG 256 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCcc
Confidence 8886 677888888743223333334443 35543
No 205
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.81 E-value=2.3 Score=41.82 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=54.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
..+-.||.|+|+|..|.++|..|... |. +++++|+. .++ +...+.. ......++.|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~~---~~~l~~~---g~~~~~~~~~~~ 75 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT----LSK---CDELVEH---GASVCESPAEVI 75 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----GGG---GHHHHHT---TCEECSSHHHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHHC---CCeEcCCHHHHH
Confidence 34457999999999999999999763 53 67778774 111 2111110 111235788888
Q ss_pred hccCCcEEEEccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCC
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVV---EAMAS-LNEKPIIFSLSN 499 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv---~~Ma~-~~erPIIFaLSN 499 (542)
+. +|++|=+ .....-.++++ +.+.+ ..+..+|.-+|+
T Consensus 76 ~~--aDvvi~~-vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 76 KK--CKYTIAM-LSDPCAALSVVFDKGGVLEQICEGKGYIDMST 116 (310)
T ss_dssp HH--CSEEEEC-CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred Hh--CCEEEEE-cCCHHHHHHHHhCchhhhhccCCCCEEEECCC
Confidence 76 7777632 21112233444 33322 235557777775
No 206
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.55 E-value=1.5 Score=43.08 Aligned_cols=93 Identities=16% Similarity=0.235 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-----------ccc-CC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----------HEH-EP 451 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-----------~~~-~~ 451 (542)
.||.|+|+|..|..+|..+.. .| .+++++|++.= .++..++... ... ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 589999999999999998865 25 25888887421 1111111100 000 01
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 009138 452 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSN 499 (542)
Q Consensus 452 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSN 499 (542)
..++.++++. +|++|=+ ... ...+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~-v~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIV-VPA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEEC-SCG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEe-CCc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2578888875 8987733 322 3458899888754 34556666644
No 207
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.36 E-value=1.6 Score=42.13 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=57.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
.||.|+|+ |..|..+|..+.. .|. +++++|+. . +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~----~---~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIA----P---EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCS----H---HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECC----H---HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998865 353 68888863 1 11111111 1 1111356677765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 501 (542)
+|++| ++..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 89888 4433333 68888888754 3456777788854
No 208
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=82.31 E-value=0.96 Score=46.13 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|++.+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57788999999999999999999886 75 689999976
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=82.22 E-value=1 Score=44.92 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..||||+|||.||+..|..|.+. |- .-+|.++|.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998653 31 1268888875
No 210
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.88 E-value=6.2 Score=38.94 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=53.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~ 461 (542)
..||.|+|+|..|.++|..|... |. ++++++|++- ..+..+ .+.+. .....++.|+++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~~-----~~~~~~----~~~~~g~~~~~~~~e~~~~ 83 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAAS-----AESWRP----RAEELGVSCKASVAEVAGE 83 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSSC-----HHHHHH----HHHHTTCEECSCHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCCC-----CHHHHH----HHHHCCCEEeCCHHHHHhc
Confidence 36899999999999999999764 53 4788888731 000011 11111 1113467777776
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCC
Q 009138 462 IKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSN 499 (542)
Q Consensus 462 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSN 499 (542)
+|++| ++... ....++++.+.+.. +..||.-+|+
T Consensus 84 --aDvVi-~~vp~-~~~~~~~~~l~~~l~~~~ivvd~st 118 (312)
T 3qsg_A 84 --CDVIF-SLVTA-QAALEVAQQAGPHLCEGALYADFTS 118 (312)
T ss_dssp --CSEEE-ECSCT-TTHHHHHHHHGGGCCTTCEEEECCC
T ss_pred --CCEEE-EecCc-hhHHHHHHhhHhhcCCCCEEEEcCC
Confidence 67766 33222 23345666665433 4556666653
No 211
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.83 E-value=1.8 Score=41.39 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=51.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+.. .|. +++++| + .++ .....+. ......++.|+++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~-~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 58 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AGH-------QLHVTT-I----GPV---ADELLSL---GAVNVETARQVTEF-- 58 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TTC-------EEEECC-S----SCC---CHHHHTT---TCBCCSSHHHHHHT--
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEEc-C----HHH---HHHHHHc---CCcccCCHHHHHhc--
Confidence 489999999999999998864 253 577776 4 111 2111111 11123567888875
Q ss_pred CcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCC
Q 009138 464 PTILIGTSGQGRTFTKEVVE---AMAS-LNEKPIIFSLSNP 500 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~---~Ma~-~~erPIIFaLSNP 500 (542)
+|++|=+.. ...-.++++. .+.+ ..+..+|+-+||-
T Consensus 59 ~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 59 ADIIFIMVP-DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSI 98 (295)
T ss_dssp CSEEEECCS-SHHHHHHHHHSTTSSTTSCCTTEEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHhCchhHhhcCCCCCEEEECCCC
Confidence 787773322 2112345554 3332 2345577777775
No 212
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.77 E-value=1.3 Score=42.75 Aligned_cols=92 Identities=13% Similarity=0.217 Sum_probs=54.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~v 462 (542)
.||.|+|+|..|..+|..+.. .|. +++++|++. ++ +.. +++. .....++.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~~----~~---~~~----~~~~g~~~~~~~~~~~~~- 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLME----AN---VAA----VVAQGAQACENNQKVAAA- 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSSH----HH---HHH----HHTTTCEECSSHHHHHHH-
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCCH----HH---HHH----HHHCCCeecCCHHHHHhC-
Confidence 589999999999999998864 253 577787631 11 111 1111 1113578888876
Q ss_pred CCcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVE---AMAS-LNEKPIIFSLSNPT 501 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~---~Ma~-~~erPIIFaLSNPt 501 (542)
+|++|=+.. ...-.++++. .+.+ ..+..+|+-+||-.
T Consensus 61 -~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 -SDIIFTSLP-NAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -CSEEEECCS-SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -CCEEEEECC-CHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 788874332 2223455553 3322 33566777788754
No 213
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.65 E-value=1.7 Score=41.98 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999999764 53 57777764
No 214
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.58 E-value=1.1 Score=42.41 Aligned_cols=96 Identities=14% Similarity=0.182 Sum_probs=56.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHh
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 460 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~ 460 (542)
+..||+|.|||-.|..+++.|++. |. +++.++++- +.+.+. ..+.+ +..+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g~-------~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----GH-------EVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 356899999999999888888652 53 577777641 112111 11111 2222345566666
Q ss_pred ccCCcEEEEccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 009138 461 AIKPTILIGTSGQGR-----------TFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g-----------~Fteevv~~Ma~~~erPIIFaLS 498 (542)
. ++|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999997664321 12566777776555566777543
No 215
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=81.43 E-value=1.7 Score=43.84 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=75.1
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCC--CCCHHHHHhc
Q 009138 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNA 461 (542)
Q Consensus 385 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~--~~~L~eaV~~ 461 (542)
||.|+| ||..|..+|-+|... .++ ...+.++|.+-. .++-.-+|.+. ++-..... ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999999887542 233 257999999741 12111113221 11000000 0256788887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHH---Hhccc---CCcEEE
Q 009138 462 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEE---AYTWS---QGRAIF 521 (542)
Q Consensus 462 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~ed---A~~wt---~GraIf 521 (542)
.|++|=+.+.+ |- +-+++++.++++++..+|+-.|||. .....- +++.+ .-+-+|
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---d~~t~~a~~~~k~sg~~p~~rv~ 144 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV---NTTVAIAAEVLKKAGVYDKNKLF 144 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH---HHHHHHHHHHHHHTTCCCTTSEE
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc---hhHHHHHHHHHHHcCCCCcceEE
Confidence 99988666544 21 2256778888899999999999996 333333 44443 234467
Q ss_pred EeC
Q 009138 522 ASG 524 (542)
Q Consensus 522 ASG 524 (542)
++|
T Consensus 145 G~~ 147 (312)
T 3hhp_A 145 GVT 147 (312)
T ss_dssp ECC
T ss_pred EEe
Confidence 776
No 216
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.34 E-value=3.7 Score=39.75 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=61.1
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCc---cCCchhchhhcc-ccCCCC
Q 009138 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL---ESLQHFKKPWAH-EHEPVK 453 (542)
Q Consensus 379 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~---~~l~~~k~~fA~-~~~~~~ 453 (542)
+++++.+|+|.|| |-.|..+++.|++ .| -+++++|+.. .... +.+. +..+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 8888888877754 25 3688888741 1110 1110 111111 212223
Q ss_pred CHHHHHhccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++.++++.+++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57788876679999988875532 0345667766555567887543
No 217
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.20 E-value=1.3 Score=44.08 Aligned_cols=100 Identities=18% Similarity=0.223 Sum_probs=60.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
.|++.+++..| +.+++|+|||.||.+|+..|... | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 88999999999999998888653 4 478888874 33322222 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC-CC
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQG----RTFTKEVVE-AMASLNEKPIIFSLS-NP 500 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~~----g~Fteevv~-~Ma~~~erPIIFaLS-NP 500 (542)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 101112221 599999776544 147888665 454 466887664 55
No 218
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=80.96 E-value=0.93 Score=44.35 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=60.2
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh---chhhcc-ccCCCCC
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF---KKPWAH-EHEPVKE 454 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~---k~~fA~-~~~~~~~ 454 (542)
+++..+|+|.|| |-.|..|++.|++ .| .+++.++++.--...+...+... ...+.. +..+..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~ 74 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEA 74 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHH
Confidence 345679999999 9999999888865 25 35888877530000000000000 011111 1122346
Q ss_pred HHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 009138 455 LVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLN-EKPIIF 495 (542)
Q Consensus 455 L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~-erPIIF 495 (542)
|.++++..++|++|=+.+..+. -+..+++++.+.. -+-+|+
T Consensus 75 l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 75 MEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 8889996679999988775432 3678999988765 455654
No 219
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.88 E-value=3.2 Score=43.81 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=61.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch-hhc-cccCCCCCHHHHHhc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~-~fA-~~~~~~~~L~eaV~~ 461 (542)
.+|.|+|+|..|..+|..|... |. +++++|+. .++ +....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~----~~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VSK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----THH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988653 53 57788763 111 111111 000 001113578898863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 462 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
+ ++|++| ++...+...+++++.+...- +..||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 489887 45444446778888776543 456888898865
No 220
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=80.85 E-value=1.4 Score=38.49 Aligned_cols=34 Identities=6% Similarity=0.137 Sum_probs=27.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+++|+|+|..|..+|+.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45689999999999999998865 25 368888874
No 221
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.80 E-value=5.6 Score=38.55 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=60.1
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh-chhhcc-ccCCCCCHH
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELV 456 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~-k~~fA~-~~~~~~~L~ 456 (542)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999985 8888888887765 25 3688888752 1111112211 111111 222224577
Q ss_pred HHHhccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 457 DAVNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999988775432 1345777776655567888543
No 222
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=80.69 E-value=2.6 Score=38.15 Aligned_cols=97 Identities=9% Similarity=0.153 Sum_probs=58.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
.+|+|.|| |-.|..+++.|++ .| .++++++++.- +.+.+.+.-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE----KIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG----GCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc----cchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 7788878777754 25 37888888521 1111211111111122223468888885
Q ss_pred CCcEEEEccCCCC----------CCCHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGR----------TFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g----------~Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 899998765431 12556888888776667888544
No 223
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.54 E-value=1.7 Score=43.26 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998653 51 368888875
No 224
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=80.33 E-value=0.98 Score=39.13 Aligned_cols=32 Identities=16% Similarity=0.441 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SDI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 479999999999999998865 353 68888874
No 225
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.25 E-value=3.9 Score=40.77 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=28.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-.||.|+|+|..|..+|..+... |. ..+++++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECC
Confidence 37999999999999999988663 64 1478888874
No 226
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.08 E-value=1.5 Score=42.86 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 475 46666653
No 227
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=79.61 E-value=0.8 Score=46.65 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=79.7
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc---cccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG---LIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 384 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG---Li~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
.||+|.| ||..|..+|-+|+. .|+-.++-.-.+.|+|.+. .+.-... +|.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999999988864 2441111111389999853 1111111 24332234433222235788999
Q ss_pred hccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhcccCC--cEEEE
Q 009138 460 NAIKPTILIGTSGQG---R-----------TFTKEVVEAMASLNEKPI-IFSLSNPTSQSECTAEEAYTWSQG--RAIFA 522 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~---g-----------~Fteevv~~Ma~~~erPI-IFaLSNPt~~aEct~edA~~wt~G--raIfA 522 (542)
++ .|++|=+.+.+ | ...+++++++.+++.+-+ |+-.|||. .++..-+++++.+ +-.|.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~~~~p~~~ig 152 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSAPSIPKENFS 152 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTCTTSCGGGEE
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHcCCCCcCEEE
Confidence 97 89988555443 2 134678889988888874 88899995 6667777665532 12355
Q ss_pred eCC
Q 009138 523 SGS 525 (542)
Q Consensus 523 SGs 525 (542)
+|.
T Consensus 153 ~~t 155 (333)
T 5mdh_A 153 CLT 155 (333)
T ss_dssp ECC
T ss_pred EEE
Confidence 554
No 228
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.26 E-value=3.6 Score=39.28 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=54.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. +.+...++.-+.. ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998865 3531 3688888641 1111111000000 012356666661 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCCC
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSNPT 501 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSNPt 501 (542)
+|++| ++..+ ..+.++++.+.. ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 77777 34333 355677766654 23455666677643
No 229
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=78.85 E-value=4.8 Score=38.94 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=58.5
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHH
Q 009138 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELV 456 (542)
Q Consensus 379 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ 456 (542)
++++..+|+|.|| |-.|..+++.|++ .|. +++.+|+.- .. ..+ .+.. +..+..++.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~-~~~-----~~~~~Dl~d~~~~~ 72 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SG-TGG-----EEVVGSLEDGQALS 72 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CS-SCC-----SEEESCTTCHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CC-CCc-----cEEecCcCCHHHHH
Confidence 4577889999998 8899999888865 353 577777642 11 111 1111 222234678
Q ss_pred HHHhccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 457 DAVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 498 (542)
++++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 73 ~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 73 DAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8888 499999887654211 345788888776678888655
No 230
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=78.76 E-value=1.5 Score=42.20 Aligned_cols=92 Identities=12% Similarity=0.185 Sum_probs=50.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV~~v 462 (542)
.||.|+|+|..|..+|..+.. .|. +++++|++. ++ +.. ++.. .....++.|+++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~~----~~---~~~----~~~~g~~~~~~~~~~~~~- 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AGY-------SLVVSDRNP----EA---IAD----VIAAGAETASTAKAIAEQ- 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECSCH----HH---HHH----HHHTTCEECSSHHHHHHH-
T ss_pred ceEEEECchHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHH----HHHCCCeecCCHHHHHhC-
Confidence 489999999999999998864 252 578887641 11 111 1111 1112467777765
Q ss_pred CCcEEEEccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCCCC
Q 009138 463 KPTILIGTSGQGRTFTKEVV---EAMAS-LNEKPIIFSLSNPT 501 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv---~~Ma~-~~erPIIFaLSNPt 501 (542)
+|++|=+.. ...-.++++ +.+.+ ..+..+|.-+||-.
T Consensus 62 -~D~vi~~v~-~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 62 -CDVIITMLP-NSPHVKEVALGENGIIEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp -CSEEEECCS-SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred -CCEEEEECC-CHHHHHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence 777763322 112234444 23322 23445666677643
No 231
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=78.34 E-value=9.9 Score=37.15 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=62.4
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch-hchhhcc-ccC-CCCCH
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHE-PVKEL 455 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~-~k~~fA~-~~~-~~~~L 455 (542)
.+...+|+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. +...+
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999995 99999998888653 23 3688888742 11111111 1112222 222 23457
Q ss_pred HHHHhccCCcEEEEccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 009138 456 VDAVNAIKPTILIGTSGQGR----------------TFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g----------------~Fteevv~~Ma~~~erPIIFaLS 498 (542)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 788885 999997766432 23467888888777 78888655
No 232
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.24 E-value=5.7 Score=38.83 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.7
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999998854 353 57888764
No 233
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=78.10 E-value=1.5 Score=41.71 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=27.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998865 353 688999764
No 234
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.63 E-value=3.3 Score=40.48 Aligned_cols=91 Identities=13% Similarity=0.176 Sum_probs=52.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|+|..|.++|..+.. .|. +++++|++ .++ ++..++. ......++.|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~-- 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR----IEA---MTPLAEA---GATLADSVADVAA-- 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS----TTT---SHHHHHT---TCEECSSHHHHTT--
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC----HHH---HHHHHHC---CCEEcCCHHHHHh--
Confidence 3589999999999999998865 253 57777764 221 2222111 1112357777776
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSN 499 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSN 499 (542)
+|++| ++.......+++++.+.+. .+.-||.-+|+
T Consensus 71 -aDvvi-~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 71 -ADLIH-ITVLDDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp -SSEEE-ECCSSHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred -CCEEE-EECCChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 67766 3322223445566666543 34456666664
No 235
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.57 E-value=1.9 Score=41.89 Aligned_cols=36 Identities=19% Similarity=0.413 Sum_probs=28.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 35689999999999999999864 353 2699999875
No 236
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.49 E-value=6.6 Score=39.31 Aligned_cols=130 Identities=13% Similarity=0.114 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW 445 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f 445 (542)
+....+.|++..+....+++++|.|||..|..+++++.. .|. +++.+|+. .++ +...++.+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~l 231 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVISTS----PSK---KEEALKNF 231 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----GGG---HHHHHHTS
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHhc
Confidence 333445667666655478999999999888877766543 362 57777753 111 11111111
Q ss_pred -cc---ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEE
Q 009138 446 -AH---EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIF 521 (542)
Q Consensus 446 -A~---~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIf 521 (542)
|. +..+...+.++.. ++|++|=+++.. ...++.++.|+.. =-|.-++.+....+..+.+.+. ++.-|.
T Consensus 232 Ga~~v~~~~~~~~~~~~~~--~~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~--~~~~i~ 303 (366)
T 1yqd_A 232 GADSFLVSRDQEQMQAAAG--TLDGIIDTVSAV-HPLLPLFGLLKSH---GKLILVGAPEKPLELPAFSLIA--GRKIVA 303 (366)
T ss_dssp CCSEEEETTCHHHHHHTTT--CEEEEEECCSSC-CCSHHHHHHEEEE---EEEEECCCCSSCEEECHHHHHT--TTCEEE
T ss_pred CCceEEeccCHHHHHHhhC--CCCEEEECCCcH-HHHHHHHHHHhcC---CEEEEEccCCCCCCcCHHHHHh--CCcEEE
Confidence 11 0011011222222 589998877643 3457888888642 2344455554333455544432 344444
Q ss_pred E
Q 009138 522 A 522 (542)
Q Consensus 522 A 522 (542)
.
T Consensus 304 g 304 (366)
T 1yqd_A 304 G 304 (366)
T ss_dssp E
T ss_pred E
Confidence 3
No 237
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=77.41 E-value=11 Score=38.25 Aligned_cols=119 Identities=17% Similarity=0.161 Sum_probs=76.1
Q ss_pred CCceeecCCc---chHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHh
Q 009138 351 THLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (542)
Q Consensus 351 ~~~~FNDDiQ---GTaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 408 (542)
.|.|.|-.-- .+|=-+++.+++..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~---- 162 (334)
T 3kb6_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLA---- 162 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHH----
T ss_pred CCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcc----
Confidence 4555554322 3344456667766542 2467889999999999999999998854
Q ss_pred hcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++..|.. .+ + ...... ....+|.|.++. .|+++=.- ..-+.|+++.++.
T Consensus 163 -fg~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~ell~~--sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 163 -FGM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp -TTC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred -cCc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHHHHhh--CCEEEEcCCCChhhccCcCHHHHhh
Confidence 264 57777753 11 1 111111 113578899887 88887431 2236899999999
Q ss_pred HHcCCCCcEEEEcCC
Q 009138 485 MASLNEKPIIFSLSN 499 (542)
Q Consensus 485 Ma~~~erPIIFaLSN 499 (542)
|. +..++.=.|.
T Consensus 220 mk---~~a~lIN~aR 231 (334)
T 3kb6_A 220 MK---DGVYLINTAR 231 (334)
T ss_dssp SC---TTEEEEECSC
T ss_pred cC---CCeEEEecCc
Confidence 96 5667775554
No 238
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=77.22 E-value=4.4 Score=38.23 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.3
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIAL 404 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~ 404 (542)
||.|+|+|..|..+|..|..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 78999999999999999865
No 239
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.21 E-value=1.3 Score=40.96 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=52.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh-chhhcc-ccCCCCCHHHH-Hhc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELVDA-VNA 461 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~-k~~fA~-~~~~~~~L~ea-V~~ 461 (542)
||+|+|+|..|..+|+.|... | .++.++|++ .++-+.+... ...+-. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999988652 5 368888864 1111111110 011111 11112345555 44
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCC
Q 009138 462 IKPTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSN 499 (542)
Q Consensus 462 vkPtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSN 499 (542)
++|++|-+.... .....+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 489999665533 22334444444 456666777665
No 240
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.00 E-value=4.5 Score=38.01 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=46.2
Q ss_pred CCCCceEEEeCc-ch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc----------c
Q 009138 380 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------H 447 (542)
Q Consensus 380 ~L~d~riv~~GA-Gs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA----------~ 447 (542)
.++++++||.|| |+ .|..+|+.+++ .|. +++++|++- +.+...++.+. .
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 88888888765 363 688888741 11222222211 0
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 448 -EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 448 -~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
|.....++.++++.+ ++|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111223455666655 789999877654
No 241
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.40 E-value=3.2 Score=40.78 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=57.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCC--chhchhhc-cccCCCCCHHHHHh
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL--QHFKKPWA-HEHEPVKELVDAVN 460 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l--~~~k~~fA-~~~~~~~~L~eaV~ 460 (542)
.||.|+|||+-|..+|..|.+. | .+++++|+.-+ ..=+...+ ......+- ++.....++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999988653 5 35888887531 00000001 00000000 00011134544 54
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 009138 461 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 502 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt~ 502 (542)
.+|++| ++..+ ...+++++.++.. .+..+|+.+.|--.
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 378877 55544 4567889988754 35678888999763
No 242
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.06 E-value=2.3 Score=39.59 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999998865 353 68899974
No 243
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=75.98 E-value=8 Score=36.91 Aligned_cols=93 Identities=12% Similarity=0.223 Sum_probs=59.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
.+|+|.|| |-.|..+++.|++. | .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 88999998888652 5 368888876 22211 22 111211 222 346777887
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888888766666888543
No 244
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=75.97 E-value=2.1 Score=41.26 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988866 375 46667653
No 245
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=75.96 E-value=5.7 Score=37.98 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=58.5
Q ss_pred CCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh----chhhcc-ccCCCCCH
Q 009138 382 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKEL 455 (542)
Q Consensus 382 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~----k~~fA~-~~~~~~~L 455 (542)
++.+|+|.|| |-.|..+++.|++ .| .+++++|++.--.. .+.+... +..+.. +..+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4678999998 8888888888765 25 36888887421000 0001000 111111 11222457
Q ss_pred HHHHhccCCcEEEEccCCCCC------C----------CHHHHHHHHcCCC-CcEEEEcC
Q 009138 456 VDAVNAIKPTILIGTSGQGRT------F----------TKEVVEAMASLNE-KPIIFSLS 498 (542)
Q Consensus 456 ~eaV~~vkPtvLIG~S~~~g~------F----------teevv~~Ma~~~e-rPIIFaLS 498 (542)
.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888889999988875421 0 3345565554443 67888644
No 246
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=75.86 E-value=1.6 Score=46.12 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=32.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999875 76 689999976
No 247
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=75.86 E-value=4.9 Score=40.32 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=26.7
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 378 g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
..--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 333457899999999888777665543 264 47888875
No 248
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.89 E-value=2.6 Score=39.93 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988865 353 68899886
No 249
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.80 E-value=2.7 Score=41.60 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=28.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+++..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988865 363 6788887543
No 250
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.79 E-value=2.6 Score=39.65 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+|||+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988865 253 58999997
No 251
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=74.78 E-value=5.3 Score=38.16 Aligned_cols=79 Identities=11% Similarity=0.143 Sum_probs=45.1
Q ss_pred CCCCceEEEeCcc-h--HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc------ccC
Q 009138 380 SLADQRFLFLGAG-E--AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHE 450 (542)
Q Consensus 380 ~L~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~------~~~ 450 (542)
.+++.++||.||. . .|.+||+.+++ .|. +++++|+.-+ . +.+...+..+.+ |..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999973 4 56667777654 363 6888888640 0 112221111111 112
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCCC
Q 009138 451 PVKELVDAVNAI-----KPTILIGTSGQGR 475 (542)
Q Consensus 451 ~~~~L~eaV~~v-----kPtvLIG~S~~~g 475 (542)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455555554 7899998877653
No 252
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=74.70 E-value=13 Score=39.72 Aligned_cols=120 Identities=19% Similarity=0.132 Sum_probs=76.4
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHh
Q 009138 350 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (542)
Q Consensus 350 ~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~ 408 (542)
..+.|.|--- ..+|=-++|.+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 4566666543 23455578888887653 2567899999999999999999998854
Q ss_pred hcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 009138 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 484 (542)
.|+ +++.+|+.- .+ + ..+ ...-...++.|+++. +|+++=.- ...+.++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~-~---~a~----~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP-A---RAA----QLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH-H---HHH----HHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch-h---HHH----hcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 353 688888642 11 0 000 000011268888886 88877442 2235677767666
Q ss_pred HHcCCCCcEEEEcC
Q 009138 485 MASLNEKPIIFSLS 498 (542)
Q Consensus 485 Ma~~~erPIIFaLS 498 (542)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 64 566777777
No 253
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=76.69 E-value=0.62 Score=43.62 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHh
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~ 460 (542)
+.+.||.|+|+|..|..+|+.+... |. +++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 42 4666665421 1 111 111011125556665
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009138 461 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 501 (542)
. +|++| ++..+. .++++++ ++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 66665 333332 3445542 22223455777788865
No 254
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=74.45 E-value=2.1 Score=36.51 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=26.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999998865 353 68888874
No 255
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=74.30 E-value=7.3 Score=42.07 Aligned_cols=100 Identities=14% Similarity=0.259 Sum_probs=56.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-c--cCCCCC-HHH
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-E--HEPVKE-LVD 457 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~--~~~~~~-L~e 457 (542)
-+.||||+|||..|-++|.+|++. .++. ..+|.+.|+.-. +.+-.......+.. . ...... |.+
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVDVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCCHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhhHHhhcCCceeEEeccchhHHHHHHH
Confidence 357899999999999999999774 3432 136888886421 11101111112221 1 111112 334
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 458 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 458 aV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
.|+. +|++|=+| ...++.+++++-.+ ..=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHH--cCCCEEECCC
Confidence 5554 59999655 33577788887653 2334566666
No 256
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=74.22 E-value=2.7 Score=40.32 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|+|+|||.||+..|..+.+ .|+ ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988854 253 688999864
No 257
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=74.13 E-value=7.1 Score=35.63 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=58.2
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+...+..+.. +..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999995 77788888887653 52 12688888752 111111111111111 11222456666
Q ss_pred HhccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 459 VNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 48999988775310 1346777777665567887544
No 258
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=73.96 E-value=5.2 Score=37.37 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=56.6
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
.++..+|+|.|| |-.|..+++.|++ .|... ..+.. .+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 366789999996 8888888888765 25300 00000 010000 011122468888
Q ss_pred HhccCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 459 VNAIKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 998899999988776431 1234688887766667888544
No 259
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=73.92 E-value=6.8 Score=40.75 Aligned_cols=115 Identities=22% Similarity=0.264 Sum_probs=63.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
.++.+||+|+|.|.+|+++|++|.+ .|. ++...|.+-.......+.|.....++-..+.+ .+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G~-------~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~----~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LGA-------IVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP----LELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TTC-------EEEEEESSCGGGCHHHHHHHHTTCEEEESCCC----GGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEeCCcccCChHHHHHHhCCCEEEECCCh----HHhh
Confidence 4678999999999999999988865 363 68888885311000001121111111111111 1111
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCC
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGS 525 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGs 525 (542)
+. .+|.+|=.++.+ .=++++.++... .-|||= | +|-++...+++.|-.|||
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~~~~~~~~~~IaVTGT 120 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVLT---------E--VELAYLVSESQLIGITGS 120 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEEC---------H--HHHHHHHCCSEEEEEECS
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEEe---------H--HHHHHHhcCCCEEEEECC
Confidence 21 168888555655 346777766553 456551 1 233444456778888886
No 260
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=73.83 E-value=9 Score=39.09 Aligned_cols=95 Identities=18% Similarity=0.371 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh
Q 009138 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 441 (542)
Q Consensus 363 aaVvLAgll~Alr~~g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~ 441 (542)
.-+|-.|++--|+..+.+|+..++|++|.+. .|.-+|-||.. .|. .+.+|.++
T Consensus 159 ~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~-------------- 212 (303)
T 4b4u_A 159 GSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR-------------- 212 (303)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT--------------
T ss_pred cCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC--------------
Confidence 3567789999999999999999999999765 57777777754 243 35555432
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 009138 442 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPT 501 (542)
Q Consensus 442 k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt 501 (542)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|.=.. |+.
T Consensus 213 ----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDVGin~~ 255 (303)
T 4b4u_A 213 ----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDAGFHPR 255 (303)
T ss_dssp ----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEECCCBCC
T ss_pred ----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEeceecC
Confidence 1368888887 99999999999999999996 455666443 543
No 261
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=73.66 E-value=2.9 Score=42.13 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
++|||+|||.||+..|..|.+ .|.. .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 589999999999999999865 3541 3789998865
No 262
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=73.04 E-value=5.4 Score=39.88 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=26.1
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 455 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 455 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+...++..|||++||..+.. --.....|+....|+|+=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568889999999986533 111222344557899875555
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=72.98 E-value=3.6 Score=41.80 Aligned_cols=37 Identities=30% Similarity=0.469 Sum_probs=28.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
+.-||||+|||.||+..|+.| . ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L-~----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAA-L----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHH-T----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHH-h----CCC-------CEEEEEECCCCC
Confidence 345899999999999999998 1 123 479999886543
No 264
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=72.98 E-value=2.1 Score=47.74 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=33.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57789999999999999999999875 76 689999987
No 265
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=72.70 E-value=2.4 Score=40.31 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+|||+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999988663 54 57888873
No 266
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=72.63 E-value=2.7 Score=43.02 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++|||+|||.||+..|..|.+. +- .-+|.++|.+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 267
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=72.56 E-value=13 Score=35.47 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 7788888777743 23 234444321 11111121111111113333 67888898 4
Q ss_pred CcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 464 PTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 464 PtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 498 (542)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778887766678898655
No 268
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=72.50 E-value=5.6 Score=40.25 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=29.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 354 2469999886543
No 269
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=72.10 E-value=6.5 Score=37.41 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=55.6
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhc
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~ 461 (542)
..+|+|.|| |-.|..+++.|+. .|. +++++++. ...| +. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 8888888887754 242 46666543 1111 21 12357778886
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 2345677776655567888544
No 270
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=72.09 E-value=3.1 Score=42.58 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=30.6
Q ss_pred HhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 376 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 376 ~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+.++.-+..+|+|+|||.||+..|..|.+. |. ++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g~-------~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----GY-------KVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeccCC
Confidence 344445567999999999999999888652 52 5777776543
No 271
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=72.04 E-value=3.8 Score=40.89 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45789999999999999998865 364 56677664
No 272
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=71.87 E-value=6.2 Score=37.16 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=58.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhcc
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~v 462 (542)
||+|.|| |-.|..+++.|... .| .++..++++.- +...+.+....+.+ +-.+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88998888886431 14 35777766421 11111111112211 22223468888886
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGRT------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g~------Fteevv~~Ma~~~erPIIFaLS 498 (542)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765421 2467888888776677888533
No 273
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=71.87 E-value=10 Score=36.18 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=42.6
Q ss_pred CCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHH
Q 009138 378 GGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 456 (542)
Q Consensus 378 g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ 456 (542)
..+++++++||-||+. .|.++|+.++ + .|. +++++|++.- .+......+.-+.....++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~----~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALV----R-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHH----H-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHH----H-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999854 3444555443 3 363 6888876421 11111111211222223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 009138 457 DAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 457 eaV~~v-----kPtvLIG~S~~~ 474 (542)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 556554 799999777653
No 274
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=71.85 E-value=4.5 Score=38.11 Aligned_cols=86 Identities=12% Similarity=0.263 Sum_probs=54.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899998 888888887774 2 4 3688887653111 011111235778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 464 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 464 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999998875431 14566777665443 5887544
No 275
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=71.78 E-value=3.2 Score=39.18 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=50.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887743 24 367888763 1 1121111111 11123567777774
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 500 (542)
+|++|=+. .+ ...+++++.+. +..+|.-+++-
T Consensus 61 ~D~Vi~~v-~~-~~~~~v~~~l~---~~~~vv~~~~~ 92 (259)
T 2ahr_A 61 VDLVILGI-KP-QLFETVLKPLH---FKQPIISMAAG 92 (259)
T ss_dssp CSEEEECS-CG-GGHHHHHTTSC---CCSCEEECCTT
T ss_pred CCEEEEEe-Cc-HhHHHHHHHhc---cCCEEEEeCCC
Confidence 78777333 23 34566666553 33466555543
No 276
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=71.76 E-value=3.2 Score=41.43 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 445789999999999999988864 364 678888753
No 277
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=71.74 E-value=3.4 Score=41.17 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=27.4
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+..+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888663 64 577777753
No 278
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=71.46 E-value=9.9 Score=36.30 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=58.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. +..+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 8888888888765 25 3678777631 111111221 111211 21222457788875
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677777665567888544
No 279
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=71.39 E-value=4.6 Score=40.10 Aligned_cols=34 Identities=32% Similarity=0.503 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 3589999999999999988754 364 688999874
No 280
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=71.20 E-value=2.8 Score=40.98 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988865 364 577777764
No 281
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=71.17 E-value=4.8 Score=37.58 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=45.7
Q ss_pred CCCCCCceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc------c
Q 009138 378 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------E 448 (542)
Q Consensus 378 g~~L~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~------~ 448 (542)
..++++.++||.||+ -.|.++|+.+++ .|. +++++|++. + ..+.+......+.+ |
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~~---~-~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVGD---R-FKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG---G-GHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecch---h-hHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 466667777754 363 688888752 1 11112111111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 449 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
.....++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 11223455555554 789999777654
No 282
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=71.15 E-value=3.7 Score=39.38 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999998865 363 68899987
No 283
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=70.91 E-value=13 Score=38.10 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=84.3
Q ss_pred HHHhcCCCceeeeecCCCccHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhC------CCCCCceEEEeCcc
Q 009138 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLG------GSLADQRFLFLGAG 392 (542)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g------~~L~d~riv~~GAG 392 (542)
+-.+| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-+=+||=++.-.+..| ++|++.||+++|-+
T Consensus 96 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 33456 443 3355553 45566677764 689998 55 4444566777777666666 37999999999998
Q ss_pred hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc---c---CCCCCHHHHHhccCCcE
Q 009138 393 EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---H---EPVKELVDAVNAIKPTI 466 (542)
Q Consensus 393 sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~---~---~~~~~L~eaV~~vkPtv 466 (542)
. + .+|+-++.++.+ .|+ +|.++-.+|+..+-..+ +.+.-+.+|.. . ....++.|||++ +||
T Consensus 171 ~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 M-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIKE-VIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp S-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCHH-HHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred C-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCHH-HHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 5 2 478888777766 475 68899888886321111 22222233322 1 123689999998 999
Q ss_pred EEE
Q 009138 467 LIG 469 (542)
Q Consensus 467 LIG 469 (542)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 974
No 284
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=70.83 E-value=3.4 Score=41.66 Aligned_cols=37 Identities=14% Similarity=0.320 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCC
Confidence 35689999999999999999865 3542 3688888754
No 285
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=70.80 E-value=3.7 Score=40.03 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=27.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...+|||+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35789999999999999988754 353 688999863
No 286
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=70.30 E-value=3.8 Score=39.13 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998866 364 577888763
No 287
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=70.27 E-value=3.7 Score=39.31 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+++|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 4689999999999999988865 253 68899987
No 288
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=70.26 E-value=3.4 Score=40.95 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+.--
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998865 364 5788887643
No 289
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=70.16 E-value=3.6 Score=40.20 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=28.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+..|||+|||.+|+.+|..|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4589999999999999999876 363 6899998643
No 290
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.10 E-value=3.6 Score=39.30 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988865 353 58889874
No 291
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=70.03 E-value=3.8 Score=41.05 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876221 13 4688888764
No 292
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=70.02 E-value=2.6 Score=40.09 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=46.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCC
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKP 464 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkP 464 (542)
||.|+|+|..|..+|..+.. |. +++++|+.. .+ .....+. ...... +.|+++. +
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~~----~~---~~~~~~~---g~~~~~-~~~~~~~--~ 56 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRTF----EK---ALRHQEE---FGSEAV-PLERVAE--A 56 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSST----HH---HHHHHHH---HCCEEC-CGGGGGG--C
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCCH----HH---HHHHHHC---CCcccC-HHHHHhC--C
Confidence 79999999999999988742 42 477777631 11 1111110 000011 4455554 6
Q ss_pred cEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCC
Q 009138 465 TILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNP 500 (542)
Q Consensus 465 tvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNP 500 (542)
|++|=+.. .....+++++.+.+. .+..+|+-+||.
T Consensus 57 D~vi~~v~-~~~~~~~v~~~l~~~l~~~~~vv~~s~~ 92 (289)
T 2cvz_A 57 RVIFTCLP-TTREVYEVAEALYPYLREGTYWVDATSG 92 (289)
T ss_dssp SEEEECCS-SHHHHHHHHHHHTTTCCTTEEEEECSCC
T ss_pred CEEEEeCC-ChHHHHHHHHHHHhhCCCCCEEEECCCC
Confidence 77663322 212245555555432 234566666764
No 293
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=69.91 E-value=9.9 Score=36.16 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=56.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhcc
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~v 462 (542)
||+|.|| |-.|..+++.|++ .| .+++++|+.- ....+.+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 7778788877754 35 3677777621 111111211 111111 112223577788766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345667776655567887544
No 294
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=69.86 E-value=3.9 Score=38.35 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEE-Eccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~l-vDsk 427 (542)
..+|||+|||.||+..|..+.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 53 4556 8873
No 295
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=69.69 E-value=7.9 Score=38.26 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=58.8
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 456 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 456 (542)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 466679999997 8888888888765 251 3688887642 11001121 11111111 111223466
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 009138 457 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASL-NEKPIIFSLS 498 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~-~erPIIFaLS 498 (542)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988875431 144567777665 4567887544
No 296
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=69.66 E-value=6.4 Score=39.47 Aligned_cols=88 Identities=13% Similarity=0.148 Sum_probs=52.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-cCCCCCHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~~~~~~L~eaV 459 (542)
|+..+|.|+|+|..|..+|..+.. .|. +++++|+.. .+ .. ..|+. .-...++.|++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~----~~--~~-----~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSG----SA--TV-----AKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTT----CH--HH-----HHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECCh----HH--HH-----HHHHHCCCEEccHHHHH
Confidence 345689999999999999998865 353 477777642 11 01 11111 00112788888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVE-AMASLN-EKPIIF 495 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~-~Ma~~~-erPIIF 495 (542)
+. +|++| ++..... .+++++ .++.+. +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 85 88877 5544433 377887 665433 344444
No 297
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=69.58 E-value=9.7 Score=33.92 Aligned_cols=91 Identities=9% Similarity=0.135 Sum_probs=54.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh--chhhcc-ccCCCCCHHHHHh
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF--KKPWAH-EHEPVKELVDAVN 460 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~--k~~fA~-~~~~~~~L~eaV~ 460 (542)
||+|.|| |-.|..+++.|++ .| .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 8888888888865 25 3688887741 111111 111111 1111112 6777
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 461 AIKPTILIGTSGQGRT-------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 461 ~vkPtvLIG~S~~~g~-------Fteevv~~Ma~~~erPIIFaLS 498 (542)
. +|++|=+.+.... .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988776422 2367888888765567777644
No 298
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=69.53 E-value=2.7 Score=39.98 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=59.0
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL--ESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~--~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
..+|+|.|| |-.|..+++.|++. | ..++..++++. .+. ..+......+.+ +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88999998888653 4 13677777641 110 001111111111 21223468888
Q ss_pred HhccCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 009138 459 VNAIKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+++ +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 3456788887665667888 664
No 299
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=69.51 E-value=3.9 Score=39.99 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..|||+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 363 589999874
No 300
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=69.38 E-value=4.4 Score=35.57 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+++|+|+|.+|+-.|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 368888875
No 301
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=68.76 E-value=9.8 Score=35.09 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
..-.+|+|.|| |-.|..|++.|++ .|- -++++++++. ++.+.+......+.+ +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7788888877754 241 2677777642 111111111111111 22223467888
Q ss_pred HhccCCcEEEEccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 009138 459 VNAIKPTILIGTSGQGRT--FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--Fteevv~~Ma~~~erPIIFaLS 498 (542)
++. .|++|=+.+.... -++.++++|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554322 2567899998766667888655
No 302
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=68.72 E-value=12 Score=35.73 Aligned_cols=97 Identities=20% Similarity=0.176 Sum_probs=55.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
.+|+|.|| |-.|..+++.|+. .| .+++.+|++. +..+.+...+..+.. +..+..++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8888888888865 25 3688887742 111112211112211 11222467788875
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999988775431 1346777776655567887543
No 303
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=68.63 E-value=13 Score=33.24 Aligned_cols=50 Identities=12% Similarity=0.195 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.++..+.++.....--.+++++|.| +|..|..+++++... |. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 4444445554333444578999999 588888888776542 52 57888763
No 304
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=68.59 E-value=5.2 Score=37.87 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=58.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|+.. ...+ +.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888988988886530 12 3577777641 1100 110 111111 21222467788887
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHcCCCCcEEEEc
Q 009138 462 IKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSL 497 (542)
Q Consensus 462 vkPtvLIG~S~~~g~---------------Fteevv~~Ma~~~erPIIFaL 497 (542)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 789999988875421 134567777765556788743
No 305
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=68.53 E-value=4.8 Score=39.53 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 46899999999999999998761 151 3689999875
No 306
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=68.22 E-value=4.9 Score=39.71 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988764 64 577777654
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=68.18 E-value=5.2 Score=42.08 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||.|+|+|..|..+|..++.. | .+++++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999998763 5 367888874
No 308
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=68.13 E-value=4.4 Score=40.64 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=26.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+|+|+|||.||+..|..|.+ .|++ ++.++|+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~ 37 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESS 37 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECC
Confidence 4689999999999999998865 3652 26667654
No 309
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=68.12 E-value=4.4 Score=39.58 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..|||+|||.+|+.+|-.|.+. |. ++.++|+...
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCC
Confidence 5799999999999999988652 53 6889998654
No 310
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=68.02 E-value=7.9 Score=35.09 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=57.7
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
+...+|+|.|| |-.|..+++.|++. |- ..++++++++. ++.+.+. .+..+.. +..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~-----~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEG-----SD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHT-----TT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhc-----CC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHH
Confidence 34578999995 77788888877652 20 13688877642 1101110 0111111 21222467788
Q ss_pred HhccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 459 VNAIKPTILIGTSGQGRT----------------F-------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 459 V~~vkPtvLIG~S~~~g~----------------F-------------teevv~~Ma~~~erPIIFaLS 498 (542)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 875 8999977764321 1 467788887665567887533
No 311
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=67.88 E-value=6.9 Score=36.78 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=23.7
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|++.++||.||+ -.|..+|+.+++ .|. +++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AGA-------RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 4678899999974 445555555543 363 68888764
No 312
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=67.80 E-value=2.9 Score=39.71 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988864 253 46778753
No 313
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=67.72 E-value=6.8 Score=41.45 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=31.1
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 513 (542)
-+++|=.|+.+--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35677778877667888877665 445655 898888888865543
No 314
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=67.69 E-value=26 Score=36.19 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=81.7
Q ss_pred HHhcCCCceeeeecCCCccHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHH
Q 009138 322 KQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIA 399 (542)
Q Consensus 322 ~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA 399 (542)
-.+| .++++ +--+. +.+.+.|.+|- ++||.| || .-=-+=+||=++.-.+..| +|++.||+|+|-|. -+|
T Consensus 122 Ls~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~---nva 192 (340)
T 4ep1_A 122 LSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN---NVC 192 (340)
T ss_dssp HHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC---HHH
T ss_pred HHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc---hhH
Confidence 3455 55443 55543 45566666764 689998 44 2333456777766666655 59999999999982 378
Q ss_pred HHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-c---CCCCCHHHHHhccCCcEEEEccCC
Q 009138 400 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTSGQ 473 (542)
Q Consensus 400 ~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~---~~~~~L~eaV~~vkPtvLIG~S~~ 473 (542)
+-++.++.+ .|+ +|.++-.+|+.-.. + +-+.-+.+|+. . ....++.|||++ +||+.-..=+
T Consensus 193 ~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 193 HSLLLASAK-VGM-------HMTVATPVGYRPNE--E-IVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHH-cCC-------EEEEECCcccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 888777766 475 68888888774321 1 11112233332 1 123689999998 9999876543
No 315
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=67.63 E-value=2.8 Score=42.10 Aligned_cols=97 Identities=15% Similarity=0.156 Sum_probs=53.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
.+...||.|+|+|..|...++.+.. +..|. +-+.++|.+ .++ .....+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988776665542 11121 223466753 121 2222233321112247899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
+.-++|+++ +++.. .+..+++....+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 4556666554432 356554
No 316
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=67.62 E-value=5.1 Score=41.88 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=28.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998763 53 588898753
No 317
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=67.62 E-value=4.6 Score=37.69 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=55.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhcc
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~v 462 (542)
+|+|.|| |-.|..+++.|++. ..| -+++.+|++. .+.+.+......+.. +..+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 88888888777541 003 3577777641 111111111111111 11222467788876
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGR----TFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g----~Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876421 24678888887766567887543
No 318
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=67.48 E-value=20 Score=35.51 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=58.2
Q ss_pred CCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHH
Q 009138 382 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 459 (542)
Q Consensus 382 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV 459 (542)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+...+..+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8888888888765 25 3688888742 111111111111211 212224577888
Q ss_pred hccCCcEEEEccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 460 NAIKPTILIGTSGQGRT--F---------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--F---------------teevv~~Ma~~~erPIIFaLS 498 (542)
+ ++|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 7 49999988775432 1 235667776655567888544
No 319
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=67.46 E-value=4.7 Score=40.74 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=28.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 345667899999999999999988764 3 136889998
No 320
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=67.44 E-value=11 Score=37.54 Aligned_cols=118 Identities=15% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCCceEEEeCcchHHHHH-HHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-----c-CCCC
Q 009138 381 LADQRFLFLGAGEAGTGI-AELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-----H-EPVK 453 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GI-A~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-----~-~~~~ 453 (542)
++.++|+|+|||..|... +.+...+ .|. ++++.+|+. .+ .+++..+++. . ....
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iqla~k~----~Ga------~~Vi~~~~~----~~-----~~~~~~~~~~lGa~~v~~~~~ 231 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAMLKVDD----KGY------ENLYCLGRR----DR-----PDPTIDIIEELDATYVDSRQT 231 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHCT----TCC------CEEEEEECC----CS-----SCHHHHHHHHTTCEEEETTTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHH----cCC------cEEEEEeCC----cc-----cHHHHHHHHHcCCcccCCCcc
Confidence 334899999999888766 5444132 363 458888863 22 0011122211 0 0011
Q ss_pred C---HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC-CCCCCCHHHHh--cccCCcEEEEe
Q 009138 454 E---LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT-SQSECTAEEAY--TWSQGRAIFAS 523 (542)
Q Consensus 454 ~---L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt-~~aEct~edA~--~wt~GraIfAS 523 (542)
+ +.+. .. +.|++|=+++.. ...++.++.|+. .=.|.-+..+. ...+..+.... .+.++.-|+.+
T Consensus 232 ~~~~i~~~-~g-g~Dvvid~~g~~-~~~~~~~~~l~~---~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 301 (357)
T 2b5w_A 232 PVEDVPDV-YE-QMDFIYEATGFP-KHAIQSVQALAP---NGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGS 301 (357)
T ss_dssp CGGGHHHH-SC-CEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHh-CC-CCCEEEECCCCh-HHHHHHHHHHhc---CCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEe
Confidence 2 4444 44 689999877632 233566666653 22344455444 33566665540 01345555543
No 321
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=67.23 E-value=6.3 Score=36.93 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|+++++||.||+ -.|..+|+.+++ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 3667899999984 445555555543 363 68888764
No 322
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.18 E-value=4.5 Score=39.32 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+...
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCC
Confidence 4799999999999999988653 63 6889998754
No 323
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=67.16 E-value=4.9 Score=40.08 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|||+|||.||+..|..|.+. |. ++.++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecC
Confidence 699999999999999998763 53 56777764
No 324
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=67.11 E-value=6.8 Score=42.52 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+++.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 567899999999999999988865 364 6899998843
No 325
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=67.10 E-value=4.8 Score=38.10 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999998865 253 268899985
No 326
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=66.50 E-value=4 Score=39.02 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
...+|+|+|||.||+..|..|.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 346899999999999999988652 53 5788887
No 327
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=66.49 E-value=5.2 Score=41.10 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999988755 25 379999986
No 328
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=66.45 E-value=8.1 Score=35.25 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=40.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc-
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 462 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v- 462 (542)
++||.|| |-.|..+|+.|++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 6667777776654 35 3688888741 1 1111 1111111113466667654
Q ss_pred -CCcEEEEccCCCC
Q 009138 463 -KPTILIGTSGQGR 475 (542)
Q Consensus 463 -kPtvLIG~S~~~g 475 (542)
++|++|=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 7999998877543
No 329
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.33 E-value=4.8 Score=41.79 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|+|+|||.||+..|..+.+.. ..|+.. .++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcCC
Confidence 48999999999999999997632 135420 1388998863
No 330
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=66.26 E-value=6.2 Score=39.97 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=29.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999998764 53 1368899987644
No 331
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=66.21 E-value=7.9 Score=37.17 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=59.7
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh----------hcc-ccC
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----------WAH-EHE 450 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~----------fA~-~~~ 450 (542)
..+|+|.|| |-.|..+++.|++ .| .+++++|+.. . ......+. +.. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 7778778877765 35 3688887641 1 11111111 111 112
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 451 PVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 451 ~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22467788887789999988775421 1346788888776678988644
No 332
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=66.14 E-value=5 Score=37.68 Aligned_cols=76 Identities=14% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh------cc-ccCC
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEP 451 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f------A~-~~~~ 451 (542)
+|++.++||.||+ -.|..+|+.++ + .|. +++++|++- +.+....+.+ .+ |..+
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~----~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 63 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLL----G-EGA-------KVAFSDINE-------AAGQQLAAELGERSMFVRHDVSS 63 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH----H-TTC-------EEEEECSCH-------HHHHHHHHHHCTTEEEECCCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH----H-CCC-------EEEEEeCCH-------HHHHHHHHHcCCceEEEEccCCC
Confidence 5778899999974 34444555554 3 363 588887641 1122111111 11 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 452 ~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
..++.++++.+ ++|+||=..+..
T Consensus 64 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 64 EADWTLVMAAVQRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455555554 689999877654
No 333
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=66.11 E-value=17 Score=33.89 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=41.6
Q ss_pred CCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHH
Q 009138 378 GGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 456 (542)
Q Consensus 378 g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ 456 (542)
..+|++.++||.||+. .|..+|+.+ .+ .|. +++++|++- ++ +.... .+.-+..+..++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l----~~-~G~-------~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRL----AA-DGH-------KVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHH----HH-TTC-------EEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHH----HH-CCC-------EEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 3467888999999743 344444444 33 353 688888741 11 21111 1111222223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 009138 457 DAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 457 eaV~~v-----kPtvLIG~S~~~ 474 (542)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555544 689999877654
No 334
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=66.04 E-value=7.1 Score=37.17 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=43.1
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-------cccC
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHE 450 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-------~~~~ 450 (542)
.+|+++++||-||+. .|.++|+.+++ .|. +++++|++ .. .+......+. -|..
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~----~~---~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AGA-------RVVLADLP----ET---DLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEECT----TS---CHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEcCC----HH---HHHHHHHHhCCCeEEEECCCC
Confidence 367889999999743 44445555543 363 68888874 11 2222222211 1112
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 451 PVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 451 ~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
...++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 223455566644 799999877654
No 335
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=66.04 E-value=4.6 Score=41.51 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..+|||+|||.||+..|..|.+.- .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999886641 12 47888888654
No 336
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=65.91 E-value=4.6 Score=41.60 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 42 13688888754
No 337
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=65.84 E-value=5 Score=38.85 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=61.1
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhc----------hhhcc-c
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK----------KPWAH-E 448 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k----------~~fA~-~ 448 (542)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 8889888888865 25 36888877421 1111111111 11111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 449 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 449 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122245778887 59999988875321 1334788888776678888633
No 338
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=65.70 E-value=6.1 Score=38.59 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..|||+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4589999999999999998854 35 3789999764
No 339
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=65.57 E-value=5.1 Score=39.61 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 364 58899987554
No 340
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=65.49 E-value=4.1 Score=41.37 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
...|||+|||.||+..|..|.+.-... + .-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 347999999999999999997652110 0 036888988753
No 341
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=65.18 E-value=5.3 Score=40.77 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 35689999999999999998865 3541 3788999863
No 342
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=65.17 E-value=5.8 Score=42.42 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 364 588999874
No 343
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.89 E-value=6.2 Score=40.35 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+|||+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 45799999999999999888653 53 68899987
No 344
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=64.87 E-value=5.8 Score=36.87 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+..|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4679999999999999988865 353 68888875
No 345
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=64.81 E-value=8.1 Score=37.55 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=59.1
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhch----------hhcc-c
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 448 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~----------~fA~-~ 448 (542)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 55678999998 8888888888765 25 3688888742 111111211111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 449 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 449 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235777887 59999998875431 1345667776655566887543
No 346
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=64.71 E-value=3 Score=45.17 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=33.1
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 357789999999999999999999874 76 789999976
No 347
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=64.50 E-value=5.8 Score=39.85 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
+..|||+|||.||+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 278899987553
No 348
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=64.39 E-value=5.4 Score=40.46 Aligned_cols=105 Identities=11% Similarity=0.149 Sum_probs=48.6
Q ss_pred HHHHHHhCCCCCC-ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc
Q 009138 371 ISAMKFLGGSLAD-QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH 449 (542)
Q Consensus 371 l~Alr~~g~~L~d-~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~ 449 (542)
|+.-.+....+++ .||-|+|+|..|..-++.+.........+. +.+ +=+-++|.+ . +......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~-~~~-elvav~d~~----~---~~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP-KRP-HLYALADQD----Q---AMAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS-SEE-EEEEEECSS----H---HHHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC-CCe-EEEEEEcCC----H---HHHHHHHHHcCC-C
Confidence 3444455556666 699999999888766665544321100110 011 123355652 1 112222222211 0
Q ss_pred CCCCCHHHHHhccCCcEEEEccCCCCCCCHHH-HHHHHc
Q 009138 450 EPVKELVDAVNAIKPTILIGTSGQGRTFTKEV-VEAMAS 487 (542)
Q Consensus 450 ~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteev-v~~Ma~ 487 (542)
.-..++.|.++.-++|+++ +++.. .+-.++ +++|.+
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~a 119 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIAA 119 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHHT
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHHc
Confidence 1237899999988899887 66655 444444 444543
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=64.26 E-value=6.6 Score=38.81 Aligned_cols=131 Identities=13% Similarity=0.051 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW 445 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f 445 (542)
.++..+.|++..+. ..++++|+|||..|..+++++.. .|. ++++.+|+. ..| ++..++.=
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~~G 212 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS----DFR---RELAKKVG 212 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HHHHHHHT
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHhC
Confidence 33444555643333 88999999999888887766543 363 368877753 111 11111100
Q ss_pred ccc--cCCCCCHHHHHhc----cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH-HHHhcccCCc
Q 009138 446 AHE--HEPVKELVDAVNA----IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTA-EEAYTWSQGR 518 (542)
Q Consensus 446 A~~--~~~~~~L~eaV~~----vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~-edA~~wt~Gr 518 (542)
|.. .....++.+.++. -+.|++|=+++.+ ...++.++.|+.. =.|.-++.+....+..+ ...+ .++.
T Consensus 213 a~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~--~~~~ 286 (348)
T 2d8a_A 213 ADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP-KALEQGLQAVTPA---GRVSLLGLYPGKVTIDFNNLII--FKAL 286 (348)
T ss_dssp CSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCH-HHHHHHHHHEEEE---EEEEECCCCSSCCCCCHHHHTT--TTTC
T ss_pred CCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCH-HHHHHHHHHHhcC---CEEEEEccCCCCcccCchHHHH--hCCc
Confidence 110 0111356665543 2578888776532 2335556666532 23333444433344554 4332 2344
Q ss_pred EEEE
Q 009138 519 AIFA 522 (542)
Q Consensus 519 aIfA 522 (542)
-|..
T Consensus 287 ~i~g 290 (348)
T 2d8a_A 287 TIYG 290 (348)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 350
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=64.22 E-value=5.5 Score=41.26 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988865 35 3688999754
No 351
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=63.99 E-value=7 Score=39.01 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=51.5
Q ss_pred HHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc--
Q 009138 371 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-- 448 (542)
Q Consensus 371 l~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-- 448 (542)
+.|+.....--.+++++|.|+|..|...+.++.. .|. +++.+|+. ..| ++..++.-|..
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~lGa~~vi 238 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSSS----REK---LDRAFALGADHGI 238 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTCSEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEecC----chh---HHHHHHcCCCEEE
Confidence 3344323333457899999999888777655532 363 57877752 111 11111111110
Q ss_pred cCCCCCHHHHHh----ccCCcEEEEccCCCCCCCHHHHHHHHc
Q 009138 449 HEPVKELVDAVN----AIKPTILIGTSGQGRTFTKEVVEAMAS 487 (542)
Q Consensus 449 ~~~~~~L~eaV~----~vkPtvLIG~S~~~g~Fteevv~~Ma~ 487 (542)
.....++.+.++ ..++|++|=+++ +..-++.++.|+.
T Consensus 239 ~~~~~~~~~~v~~~~~g~g~D~vid~~g--~~~~~~~~~~l~~ 279 (363)
T 3uog_A 239 NRLEEDWVERVYALTGDRGADHILEIAG--GAGLGQSLKAVAP 279 (363)
T ss_dssp ETTTSCHHHHHHHHHTTCCEEEEEEETT--SSCHHHHHHHEEE
T ss_pred cCCcccHHHHHHHHhCCCCceEEEECCC--hHHHHHHHHHhhc
Confidence 111235555554 336899998877 3445566777653
No 352
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=63.98 E-value=17 Score=33.44 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=24.0
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..|+++++||.||+. .|.++|+.++ + .|. +++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~----~-~G~-------~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYA----A-HGA-------SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHH----H-TTC-------EEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHH----H-CCC-------EEEEEecC
Confidence 357889999999843 3444555443 3 363 68888875
No 353
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=63.90 E-value=16 Score=35.72 Aligned_cols=108 Identities=21% Similarity=0.238 Sum_probs=57.8
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc---cCCCccCCchh------chhhcc-
Q 009138 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---VSSRLESLQHF------KKPWAH- 447 (542)
Q Consensus 379 ~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi---~~~R~~~l~~~------k~~fA~- 447 (542)
.+++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 88888888887652 014 378888874210 00000011111 111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 448 EHEPVKELVDAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 448 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+.....++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111244554 33479999987774431 124567777665555 888655
No 354
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=63.86 E-value=50 Score=34.01 Aligned_cols=111 Identities=11% Similarity=0.117 Sum_probs=61.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
.++.+||+|+|.|-+|++.|+.+.+ .|. ++...|++-..... ..|. ....+-.. ..-.+++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g----~~~~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTG----SLNDEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEES----SCCHHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEEC----CCcHHHh
Confidence 3567899999999999999876643 464 57788886431100 1121 11111100 1125677
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEeCC
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGS 525 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraIfASGs 525 (542)
+ .+|.+|=.++.+- -.+++..+... ..|++ + | .|-++...+.+.|-.||+
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~~--~~~v~---~------~--~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAADA--GIEIV---G------D--IELFCREAQAPIVAITGS 112 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHHT--TCEEE---C------H--HHHHHHHCCSCEEEEECS
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHHC--CCcEE---E------H--HHHHHHhcCCCEEEEECC
Confidence 6 4888875555442 34666665432 23433 1 1 233333345677888886
No 355
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=63.49 E-value=5.8 Score=40.98 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 368999986
No 356
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=63.49 E-value=9.5 Score=42.54 Aligned_cols=34 Identities=32% Similarity=0.333 Sum_probs=27.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.=.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 346899999999999999998764 64 58888864
No 357
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=63.35 E-value=9.4 Score=35.87 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=55.0
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
-...+|+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +. ...++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHHH
Confidence 34578888887 7788888877754 24 368888764 111 21 123577788
Q ss_pred hccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 460 NAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76679999988875431 03556777765444 7887544
No 358
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=63.19 E-value=6.2 Score=40.02 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|||+|||.||+..|..|.+. - .| .++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~-~--~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL-M--PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-C--TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC-C--CC-------CeEEEECCCC
Confidence 5899999999999999998762 0 12 3788888764
No 359
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=63.14 E-value=5.2 Score=41.30 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999998855 25 3789999864
No 360
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=63.11 E-value=6.3 Score=36.81 Aligned_cols=77 Identities=27% Similarity=0.343 Sum_probs=44.3
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc-------cccC
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHE 450 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA-------~~~~ 450 (542)
.++++.++||.||+. .|..+|+.+++ .| -+++++|++- +.+...++.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 35556655543 36 3688888641 11222222211 1112
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 451 PVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 451 ~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223556666655 799999877654
No 361
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=63.10 E-value=5.7 Score=41.03 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999988765 363 6889998654
No 362
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=62.93 E-value=42 Score=34.01 Aligned_cols=168 Identities=14% Similarity=0.159 Sum_probs=98.5
Q ss_pred HHHHHHHHhcCCCceeeeecCCCccHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCCCC-CceEEEeCcc
Q 009138 316 EFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLA-DQRFLFLGAG 392 (542)
Q Consensus 316 efv~av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~L~-d~riv~~GAG 392 (542)
+.++ +-.+| .++ |-+-.++ +.+.+.|.+|- ++||.| || +-=-+=+||=++.-.+.. ++|+ +.||+++|-+
T Consensus 83 DTar-vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD~ 155 (307)
T 3tpf_A 83 DTAR-VIGAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGDS 155 (307)
T ss_dssp HHHH-HHHHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESCS
T ss_pred HHHH-HHHHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcCC
Confidence 3444 33445 443 3355554 45666677765 689998 54 333345666666655544 4799 9999999997
Q ss_pred hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcccc----CCCCCHHHHHhccCCcEEE
Q 009138 393 EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTILI 468 (542)
Q Consensus 393 sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~----~~~~~L~eaV~~vkPtvLI 468 (542)
. -+|+-++.++.+ .|+ +|.++-.+|+.-.. + +-...+.+|+.. ....++.|||++ +||+.
T Consensus 156 ~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy 219 (307)
T 3tpf_A 156 N---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP--E-IWEFAMKQALISGAKISLGYDKFEALKD--KDVVI 219 (307)
T ss_dssp S---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEE
T ss_pred C---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH--H-HHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEE
Confidence 4 488888777766 475 68888888774321 1 111122333321 123689999998 99997
Q ss_pred EccCC--C--------------CCCCHHHHHHHHcCCCCcEEEEcCCCCC-CCCCCHHH
Q 009138 469 GTSGQ--G--------------RTFTKEVVEAMASLNEKPIIFSLSNPTS-QSECTAEE 510 (542)
Q Consensus 469 G~S~~--~--------------g~Fteevv~~Ma~~~erPIIFaLSNPt~-~aEct~ed 510 (542)
-..=+ + =.+|+|.++.+. +.-||+-. =|-. .-|++.|-
T Consensus 220 t~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~---~~ai~mH~-lPa~Rg~EI~~eV 274 (307)
T 3tpf_A 220 TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVAN---KDAILLHC-LPAYRGYEVSEEI 274 (307)
T ss_dssp ECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSC---TTCEEEEC-SCCCBTTTBCHHH
T ss_pred ecCcccCCchhhHHHHHHHhcccccCHHHHHhcC---CCcEEECC-CCCCCCceeCHHH
Confidence 65511 1 125666665542 45565522 2321 25777653
No 363
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=62.86 E-value=5.6 Score=42.57 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 353 688999864
No 364
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=62.74 E-value=5.3 Score=38.58 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=26.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999988652 53 57788854
No 365
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.74 E-value=8.5 Score=41.04 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=21.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++++.+++|.|||.+|.++|..+++. |. +++++|+.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999996666666666542 62 57888764
No 366
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=62.70 E-value=5.5 Score=37.39 Aligned_cols=84 Identities=20% Similarity=0.391 Sum_probs=54.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
.||+|.|| |-.|..+++.|++ .| .+++.+|+. ..| +. +...+.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhc
Confidence 38999996 8888888877754 24 368888871 111 21 123577888877
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
++|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999988775531 03457777766554 4887544
No 367
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=62.51 E-value=5.7 Score=37.52 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|||+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988754 353 56677653
No 368
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=62.50 E-value=7.1 Score=38.76 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=25.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|+|+|||.+|+..|-.|.+. | .++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCC
Confidence 699999999999999988763 5 357777765
No 369
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=62.47 E-value=11 Score=36.48 Aligned_cols=81 Identities=7% Similarity=0.124 Sum_probs=46.0
Q ss_pred CCCCCCceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-----hcc-c
Q 009138 378 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-----WAH-E 448 (542)
Q Consensus 378 g~~L~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~-----fA~-~ 448 (542)
..+|+++++||.||+ -.|.+||+.+++ .|. +++++|++. ...+.+...... +.. |
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 346888999999996 355557777765 363 688888752 111111111111 111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 449 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
.....++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 12223455666654 799999877654
No 370
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=62.46 E-value=6.2 Score=37.60 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=24.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
--|||+|||+||+..|..+.+ .|. ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 357999999999999877754 353 68888864
No 371
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=62.34 E-value=8.6 Score=40.08 Aligned_cols=120 Identities=12% Similarity=0.039 Sum_probs=68.3
Q ss_pred CceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEc--cccc---ccCCCccCCchhchhhccccCCCCCHH
Q 009138 383 DQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD--SKGL---IVSSRLESLQHFKKPWAHEHEPVKELV 456 (542)
Q Consensus 383 d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvD--skGL---i~~~R~~~l~~~k~~fA~~~~~~~~L~ 456 (542)
..||.|+| ||..|..+|-.|+.. ++-- |. ..+.|+| .... +.-... +|.+-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~-e~-~~l~L~d~d~~~~~~~~~G~am-DL~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFG-QD-QPIALKLLGSERSFQALEGVAM-ELEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTC-TT-CCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCC-CC-ceeEEEecCccchhhhhHHHHH-hHHhhhhhhcCCcEEecCCH
Confidence 36999999 799999998877652 4411 11 1255544 3210 000001 13333334443222124578
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcC-CCCcEEEEcCCCCCCCCCCHHHHhccc
Q 009138 457 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASL-NEKPIIFSLSNPTSQSECTAEEAYTWS 515 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~-~erPIIFaLSNPt~~aEct~edA~~wt 515 (542)
+++++ .|++|=+.+.+ |- +=++++++++++ +..-||+-.|||. ....--|++.+
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv---D~~t~ia~k~s 172 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC---NTNALICLKNA 172 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch---hHHHHHHHHHc
Confidence 88887 89887555443 21 123556667776 7889999999996 44555555543
No 372
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=62.17 E-value=6.4 Score=40.42 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.++||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 3579999999999999987765 253 689999873
No 373
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=62.03 E-value=6.3 Score=40.23 Aligned_cols=32 Identities=19% Similarity=0.404 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888663 64 67788765
No 374
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=62.01 E-value=5.8 Score=41.10 Aligned_cols=34 Identities=29% Similarity=0.434 Sum_probs=28.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 35689999999999999998865 25 368999986
No 375
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=61.97 E-value=5.7 Score=40.74 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.++||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999987755 353 68899986
No 376
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.97 E-value=4.8 Score=41.43 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
||.|+|+|..|..+|..+.+ | .+++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999987742 3 368888874
No 377
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=61.89 E-value=7.4 Score=35.82 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=23.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.++++.+++|.||.. ||...++..+.+ .|. +++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G~-------~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EGA-------KVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 357788999999743 334444444443 353 68888864
No 378
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=61.85 E-value=6.4 Score=40.18 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988664 11 13688888765
No 379
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=61.65 E-value=5.5 Score=41.23 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
.+|||+|||.||...|-.|.+... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999977431 243 6888888643
No 380
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=61.54 E-value=6.8 Score=41.49 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=29.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..+|||+|||.||...|..|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999999876420 24 37889998643
No 381
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=61.53 E-value=6 Score=41.02 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=28.8
Q ss_pred cCCcchHHHHHHHHHHHHHH---hCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 357 DDIQGTASVVLAGLISAMKF---LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 357 DDiQGTaaVvLAgll~Alr~---~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
...||-|+++.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 7 ~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 7 HHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp ------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 34567776655444432211 111112258999999999999999886531 13 478999987543
No 382
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=61.53 E-value=6.6 Score=41.01 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...|||+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588998764
No 383
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=61.43 E-value=7.6 Score=38.84 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|+|+|||.+|+..|-.|.+. | .++.++|+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 799999999999999988663 5 357777765
No 384
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=61.35 E-value=99 Score=31.07 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=82.6
Q ss_pred HHHhcCCCceeeeecCCCccHHHHHHHHcCCCceee----cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCc--chH
Q 009138 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN----DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGA--GEA 394 (542)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN----DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GA--GsA 394 (542)
+-.+||.++++ +-.++...+.+++.+|- ++||.| |..|=| =+||=++.-.+..| +|++.||+++|- |+
T Consensus 85 vls~~~~D~iv-iR~~~~~~~~~~la~~~-~vPVINAG~g~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV-FRVPFVFFPYKEIVKSL-NLRLVNAGDGTHQHPS--QGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS- 158 (291)
T ss_dssp HHHHTTCSEEE-EEESSCCCSCHHHHHTC-SSEEEEEEETTTBCHH--HHHHHHHHHHHHHS-CCTTCEEEEESCCTTC-
T ss_pred HHHHhcCCEEE-EEcCChHHHHHHHHHhC-CCCEEeCccCCCcCcH--HHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-
Confidence 44677655543 55665555444377774 699999 445544 45677666655554 799999999998 63
Q ss_pred HHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccCCcEEEEccCC
Q 009138 395 GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQ 473 (542)
Q Consensus 395 g~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~ 473 (542)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. +.. + ...-..++.||+++ +||+.-+-.+
T Consensus 159 --rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~----~--g~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 --RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEV----F--KVDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp --HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGG----G--CEEEESSHHHHHHH--CSEEEECCCC
T ss_pred --chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHH----C--CCEEEcCHHHHhCC--CCEEEEeCcc
Confidence 377777777766 475 79999999884322 211 1 01113689999998 9999985543
No 385
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=61.29 E-value=7.8 Score=38.28 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=61.4
Q ss_pred CCCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-------hcc-c
Q 009138 378 GGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAH-E 448 (542)
Q Consensus 378 g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~-------fA~-~ 448 (542)
...+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- .+...+.. +.. +
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~D 78 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGD 78 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECC
Confidence 34577889999996 88999998888652 142 47888876411 11111111 111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----C------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 449 HEPVKELVDAVNAIKPTILIGTSGQGRT----F------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 449 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----F------------teevv~~Ma~~~erPIIFaLS 498 (542)
..+..++.++++. +|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 79 l~d~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 79 VRDLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TTCHHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCHHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 1222457777874 8999998876531 0 235666666665567888554
No 386
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=61.24 E-value=7.2 Score=39.73 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999999774311 3 3677887754
No 387
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=61.20 E-value=28 Score=32.57 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=42.2
Q ss_pred CCCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHH
Q 009138 379 GSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (542)
Q Consensus 379 ~~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 457 (542)
..+++.++||.||+ -.|..+|+.+++ .|. +++++|++- ...+.+. +..+.-+. ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 45788999999984 345555555543 363 688888753 0001111 11111111 235666
Q ss_pred HHhcc-CCcEEEEccCCC
Q 009138 458 AVNAI-KPTILIGTSGQG 474 (542)
Q Consensus 458 aV~~v-kPtvLIG~S~~~ 474 (542)
+++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66655 799999877654
No 388
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=61.13 E-value=17 Score=32.74 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=56.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCC-CCCHHHHHhc
Q 009138 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEP-VKELVDAVNA 461 (542)
Q Consensus 385 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~-~~~L~eaV~~ 461 (542)
||+|.| +|-.|..+++.|++ .| -++++++++.- +.+.+ .+..+.+ +..+ ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 57777777776643 35 36888887521 11111 1111111 2222 2356777775
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567889988776677888554
No 389
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=61.12 E-value=2.6 Score=43.91 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=21.4
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~ 405 (542)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998763
No 390
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=61.12 E-value=14 Score=36.70 Aligned_cols=49 Identities=20% Similarity=0.141 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
.++..+.|++..+. -..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444556654443 346799999999888776655532 363 46887775
No 391
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=61.12 E-value=6.7 Score=41.23 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999998865 365 45666654
No 392
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=60.98 E-value=6.5 Score=38.00 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=29.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999888664 5 368888864
No 393
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=60.96 E-value=6.6 Score=41.30 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999988653 5 3688999865
No 394
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=60.85 E-value=4.4 Score=40.11 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=51.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|...++.+.. +..+. +-+.++|++ . +......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988876665542 11121 223356652 1 1122222222110122478999999878
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
+|+++ +++.. ....+++....+.. ++++.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44433 46666666554433 55553
No 395
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=60.81 E-value=6.8 Score=40.07 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.++||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999988765 25 3689999873
No 396
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.80 E-value=8.4 Score=42.12 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=28.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 46899999999999999998764 53 689999863
No 397
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=60.79 E-value=5.2 Score=38.83 Aligned_cols=91 Identities=5% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCCceEEEeCcchHHHH-HHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 381 LADQRFLFLGAGEAGTG-IAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GAGsAg~G-IA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
++..||.|+|+|..|.. .++.+.. ..+. +-+.++|++ . +......+.|- .+...++.|++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~~--~~~~~~~~~ll 64 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN----K---VKREKICSDYR--IMPFDSIESLA 64 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC----H---HHHHHHHHHHT--CCBCSCHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC----H---HHHHHHHHHcC--CCCcCCHHHHH
Confidence 34579999999998875 5555522 1121 223366652 1 11222222221 12257899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
+ ++|+++ +++.. ....+++....+ ..++++.
T Consensus 65 ~--~~D~V~-i~tp~-~~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 65 K--KCDCIF-LHSST-ETHYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp T--TCSEEE-ECCCG-GGHHHHHHHHHH-TTCEEEE
T ss_pred h--cCCEEE-EeCCc-HhHHHHHHHHHH-CCCcEEE
Confidence 8 699988 55545 355555554333 2456553
No 398
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=60.75 E-value=7.4 Score=38.65 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=18.6
Q ss_pred eEEEeCcchHHHHHHHHHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~ 405 (542)
+|+|+|||.||+..|-.|.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~ 22 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA 22 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 699999999999999888653
No 399
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=60.66 E-value=6.5 Score=45.93 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=33.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++|++.+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999886 76 789999986
No 400
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.65 E-value=6.9 Score=41.09 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=28.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||+..|-.|.+... .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999998876310 243 688999854
No 401
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=60.53 E-value=23 Score=33.07 Aligned_cols=76 Identities=14% Similarity=0.225 Sum_probs=40.0
Q ss_pred CCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh------hcc-ccCC
Q 009138 380 SLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAH-EHEP 451 (542)
Q Consensus 380 ~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~------fA~-~~~~ 451 (542)
+|+++++||-||+. .|.++|+.++ + .|. +++++|++- .+ +...... +.. |...
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~----~-~G~-------~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~ 64 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLA----Q-EGA-------TVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTN 64 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHH----H-TTC-------EEEEEESSC----C---------------CEEEECCTTC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHH----H-CCC-------EEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCC
Confidence 57788999999853 3444555544 3 363 688888642 11 1111111 111 2122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 452 ~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
..++.++++.+ +.|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 65 EADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666544 799999776643
No 402
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=60.48 E-value=9.9 Score=38.72 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||.|+|+|..|..+|..|... | .+++++|++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 5899999999999999988653 5 368888864
No 403
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.45 E-value=9 Score=40.09 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCC
Confidence 4899999999999999988653 21 247889988754
No 404
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=60.43 E-value=4.8 Score=39.08 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=25.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 7999999999999999886410 024 268888875
No 405
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=60.39 E-value=15 Score=34.31 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=44.7
Q ss_pred CCCCCceEEEeCcch---HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh-------c-c
Q 009138 379 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------A-H 447 (542)
Q Consensus 379 ~~L~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f-------A-~ 447 (542)
.++++.++||.||+. .|.++|+.+++ .|. +++++|+.. ...+.+.+....+ . -
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 56667777754 363 588887752 1101111111111 1 1
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 448 EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 448 ~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
|.....++.++++.+ ++|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222223566666654 789999877654
No 406
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=60.37 E-value=4.1 Score=43.06 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=25.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999877632 12 379999985
No 407
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=60.35 E-value=12 Score=35.76 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=39.6
Q ss_pred CCCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCH
Q 009138 378 GGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKEL 455 (542)
Q Consensus 378 g~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L 455 (542)
+.++.++++||-||+. .|.++|+.++ + .|. +++++|++- ++.+.+...+..+.. +..+..++
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~----~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v 74 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFS----E-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTF 74 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHH----H-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHH----H-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHH
Confidence 3457788999999753 3444444443 3 363 688887641 111111111111111 21222345
Q ss_pred HHHHhcc-----CCcEEEEccCCC
Q 009138 456 VDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 456 ~eaV~~v-----kPtvLIG~S~~~ 474 (542)
.++++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 75 DTAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCcC
Confidence 5556544 689999777653
No 408
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=60.13 E-value=7.7 Score=41.00 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=28.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 364 688898764
No 409
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=60.00 E-value=6.9 Score=41.11 Aligned_cols=24 Identities=33% Similarity=0.493 Sum_probs=20.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHH
Q 009138 381 LADQRFLFLGAGEAGTGIAELIAL 404 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~ 404 (542)
-++..|+|+|||.||+..|-.|.+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~ 32 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL 32 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH
Confidence 456789999999999999998866
No 410
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=59.90 E-value=7.8 Score=40.69 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 35689999999999999988865 363 6888887643
No 411
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=59.80 E-value=4.5 Score=45.18 Aligned_cols=36 Identities=25% Similarity=0.483 Sum_probs=31.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 788999999999999999998764 76 6899999873
No 412
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=59.78 E-value=9.1 Score=40.01 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=26.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvD 425 (542)
+.++||+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 15 3689999
No 413
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=59.76 E-value=7.1 Score=40.13 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.++||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 35799999999999999888652 53 689999874
No 414
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=59.61 E-value=8.8 Score=39.25 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=28.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..+|||+|||.||+..|..+.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 354 137889987643
No 415
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=59.51 E-value=6.4 Score=37.17 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.|||+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 68999999999999876654 364 57788864
No 416
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=59.45 E-value=10 Score=35.41 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=56.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhc
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~ 461 (542)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|++. .+.+.+......+.+ +..+..+|.+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc
Confidence 36899998 88888888877541 003 3577777641 111111111111211 21222467888885
Q ss_pred cCCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGR------TFTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g------~Fteevv~~Ma~~~erPIIFaLS 498 (542)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 --~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 --VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp --CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998877431 02356777777665567887543
No 417
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=59.29 E-value=8.6 Score=39.09 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 009138 383 DQRFLFLGAGEAGTGIAELIALE 405 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~ 405 (542)
+.-|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988664
No 418
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=59.24 E-value=5.4 Score=39.39 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=50.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|...++.+... .+. +-+.++|++ . +......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN----PDL------ELVVIADPF----I---EGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSS----H---HHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHhC----CCc------EEEEEECCC----H---HHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 5899999999888777665431 121 223366653 1 11222222221 122478999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
+|+++ +++.. ....+++....+. .++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVER-GIPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHc-CCcEEE
Confidence 99888 44444 4555665554433 355553
No 419
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.24 E-value=8.9 Score=40.09 Aligned_cols=37 Identities=22% Similarity=0.375 Sum_probs=28.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~ 46 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDP 46 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCC
Confidence 356899999999999999988653 11 24799999874
No 420
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.05 E-value=6.9 Score=39.99 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999988765 25 368999986
No 421
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=58.93 E-value=7.3 Score=38.82 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.++||+|||.||+..|..+.+ .|. .-+|.++|.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988854 353 2357777764
No 422
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=58.91 E-value=8.1 Score=39.52 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
.+|||+|||.||+..|..|.+.. .| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999987641 12 47888887643
No 423
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=58.91 E-value=7.2 Score=38.27 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=50.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
.||.|+|+|..|...++.+... .+. +-+.++|++ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN----ADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhhC----CCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 5899999999888777665431 121 123356653 1 11222222221 12 678999999767
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 464 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
+|+++ +++.+ ....++++...+. .++++.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 4555555554332 355553
No 424
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=58.78 E-value=11 Score=37.31 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=35.9
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 357 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 357 DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
++.++.....++..+.|++..+. -..++++|+|||..|...+.+... .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33344444345555666655543 346789999999888776655432 464 46888875
No 425
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.71 E-value=7.4 Score=40.61 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988652 5 3689999863
No 426
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=58.52 E-value=8.9 Score=39.81 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999999764 20 014788999864
No 427
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=58.49 E-value=73 Score=33.07 Aligned_cols=116 Identities=14% Similarity=0.175 Sum_probs=78.4
Q ss_pred CccHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCC-CCCce--EEEeCc----chHHHHHHHHHHHHHHh
Q 009138 338 NHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGS-LADQR--FLFLGA----GEAGTGIAELIALEISK 408 (542)
Q Consensus 338 ~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~-L~d~r--iv~~GA----GsAg~GIA~ll~~~~~~ 408 (542)
.+.+.+.+.+|- ++||.| ||.|= +=+||=++.-.+..|++ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~HP--tQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETITHP--CQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSCCH--HHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCCCc--HHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 456777777875 689999 77744 45677777777777765 99999 889998 6 3477777777665
Q ss_pred hcCCChhhccCeEEEEccc-ccccCCCccCCchhchhhcccc----CCCCCHHHHHhccCCcEEEEccC
Q 009138 409 QTNMPLEETRKKIWLVDSK-GLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTILIGTSG 472 (542)
Q Consensus 409 ~~G~s~eeAr~~i~lvDsk-GLi~~~R~~~l~~~k~~fA~~~----~~~~~L~eaV~~vkPtvLIG~S~ 472 (542)
.|+ +|.++-.+ |+.-.. + +-..-+.+|+.. ....++.|||++ +||+.-..=
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~--~-~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE--R-YMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH--H-HHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred -cCC-------EEEEEcCccccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 475 68888887 774321 1 111112233321 123689999998 999987653
No 428
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.48 E-value=25 Score=34.30 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=32.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 360 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
++...-.++..+.+.+..+ .-.+++++|.|||..|...+.++.. .|. +.++.+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 4443333444444444443 3467899999999888766544432 364 45666664
No 429
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.41 E-value=7 Score=40.88 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4689999999999999988865 364 577888763
No 430
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=58.28 E-value=10 Score=35.60 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=24.4
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|+++++||.||+. .|.++|+.+++ .|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~-----~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAA-----DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 357889999999753 44455555543 363 68888764
No 431
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=58.10 E-value=23 Score=34.69 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=57.5
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchh----------chhhcc-ccCC
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-EHEP 451 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~----------k~~fA~-~~~~ 451 (542)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--.. .+.+... +..+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSFN--TGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSCC--CTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCccccc--hhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 8888888887765 25 36888887521000 0112111 111111 1122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCC---CcEEEEcC
Q 009138 452 VKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNE---KPIIFSLS 498 (542)
Q Consensus 452 ~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~e---rPIIFaLS 498 (542)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2467788888889999988775421 12345666665443 57887544
No 432
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=58.06 E-value=10 Score=37.47 Aligned_cols=97 Identities=20% Similarity=0.178 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA 446 (542)
+..+.|+...+.--.+++++|.|| |..|..++.++.. .|. +++.+|+. ..+ ++..++.-|
T Consensus 145 ~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~ga 205 (342)
T 4eye_A 145 HTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVNR----TAA---TEFVKSVGA 205 (342)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESS----GGG---HHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeCC----HHH---HHHHHhcCC
Confidence 334445543444456789999998 9988888776643 363 57777763 111 111111111
Q ss_pred cc--cCCCCCHHHHHhc----cCCcEEEEccCCCCCCCHHHHHHHH
Q 009138 447 HE--HEPVKELVDAVNA----IKPTILIGTSGQGRTFTKEVVEAMA 486 (542)
Q Consensus 447 ~~--~~~~~~L~eaV~~----vkPtvLIG~S~~~g~Fteevv~~Ma 486 (542)
.. ... .++.+.++. .+.|++|=+++.. ..++.++.|+
T Consensus 206 ~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~--~~~~~~~~l~ 248 (342)
T 4eye_A 206 DIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGP--AFDDAVRTLA 248 (342)
T ss_dssp SEEEESS-TTHHHHHHHHTTTSCEEEEEESCC----CHHHHHHTEE
T ss_pred cEEecCc-hhHHHHHHHHhCCCCceEEEECCchh--HHHHHHHhhc
Confidence 10 111 455555543 2578888776632 3455555554
No 433
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=58.02 E-value=27 Score=34.69 Aligned_cols=33 Identities=18% Similarity=0.475 Sum_probs=25.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+++++|.|||..|..+++++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999998888877776643 25 2 68888864
No 434
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=57.97 E-value=8.6 Score=37.03 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=58.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCC---CccCCchhc------hhhcc-ccCCC
Q 009138 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---RLESLQHFK------KPWAH-EHEPV 452 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~---R~~~l~~~k------~~fA~-~~~~~ 452 (542)
.+|+|.|| |-.|..+++.|++ .|. +++++|+.---..+ ..+.+...+ ..+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AGY-------LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 58999986 8888888888765 253 58888764110000 000011100 01111 11122
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 453 KELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 453 ~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
.++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357778876679999988775421 1345777777665567888543
No 435
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=57.83 E-value=20 Score=33.99 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.4
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhc
Q 009138 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (542)
Q Consensus 383 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~ 461 (542)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8888888888754 25 367777753 111 0 1 111122223567888887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 462 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 462 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988765421 02456666665443 6777543
No 436
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=57.73 E-value=12 Score=35.09 Aligned_cols=78 Identities=13% Similarity=0.162 Sum_probs=43.7
Q ss_pred CCCceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh-----hcc-ccCC
Q 009138 381 LADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-----WAH-EHEP 451 (542)
Q Consensus 381 L~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~-----fA~-~~~~ 451 (542)
|+++++||.||+ -.|..+|+.+++ .|. +++++|++. + ..+.+.+.... +.+ |..+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~~---~-~~~~~~~l~~~~~~~~~~~~D~~~ 70 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQND---K-LKGRVEEFAAQLGSDIVLQCDVAE 70 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESST---T-THHHHHHHHHHTTCCCEEECCTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCcH---H-HHHHHHHHHHhcCCcEEEEccCCC
Confidence 677899999984 566667777654 363 688888753 1 11111111111 111 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 452 ~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
..++.++++.+ ++|+||=..+..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 71 DASIDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455555544 689999887754
No 437
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=57.71 E-value=16 Score=37.53 Aligned_cols=115 Identities=19% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccccc--CCCccCCchhchhhccccCCCCCHH
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV--SSRLESLQHFKKPWAHEHEPVKELV 456 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~--~~R~~~l~~~k~~fA~~~~~~~~L~ 456 (542)
.++-.||.|+|| |..|-.+|-+|...- =+....+ -.+.|+|...-.. ++-.-+|.+---+......-..+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~----l~~~~~~-~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGA----LLGPTTP-VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTT----TTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhcc----ccCCCCc-cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 456679999997 999988888776531 1111111 3688999642111 0000013222111211111124688
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009138 457 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLN-EKPIIFSLSNPT 501 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~-erPIIFaLSNPt 501 (542)
+++++ .|++|=+.+.+ |- +=+++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 99998 99998666554 21 1245666677765 566888899995
No 438
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=57.66 E-value=8.7 Score=39.54 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+..++|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 3579999999999999988865 353 689999654
No 439
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=57.65 E-value=31 Score=32.59 Aligned_cols=75 Identities=11% Similarity=0.039 Sum_probs=41.4
Q ss_pred CCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 009138 381 LADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (542)
Q Consensus 381 L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ea 458 (542)
++++++||-||+. .|.++|+.+++ .|. +++++|++- .. +...+..+.. |.....++.++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~ 86 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRD-----RNY-------RVVATSRSI----KP---SADPDIHTVAGDISKPETADRI 86 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHH
Confidence 5677899999753 44445555543 363 688888741 11 1111111211 22222345555
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 009138 459 VNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 459 V~~v-----kPtvLIG~S~~~ 474 (542)
++.+ ++|+||=..+..
T Consensus 87 ~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 87 VREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEECCCCC
Confidence 6544 799999877654
No 440
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=57.64 E-value=26 Score=34.35 Aligned_cols=78 Identities=18% Similarity=0.327 Sum_probs=48.9
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhccC
Q 009138 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (542)
Q Consensus 385 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~vk 463 (542)
||+|.| +|-.|..+++.|++. |. -+++.+|.. ....+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 799999 488998888888763 42 257766664 111346666765
Q ss_pred CcEEEEccCCCC------------CCCHHHHHHHHcCCCC-cEEEEc
Q 009138 464 PTILIGTSGQGR------------TFTKEVVEAMASLNEK-PIIFSL 497 (542)
Q Consensus 464 PtvLIG~S~~~g------------~Fteevv~~Ma~~~er-PIIFaL 497 (542)
+|++|=+.+... ..+..+++++.+..-+ .+||.=
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 93 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS 93 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 788886654321 1245677777665444 577643
No 441
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=57.61 E-value=6.6 Score=40.33 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.+++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988864 25 379999986
No 442
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=57.58 E-value=9 Score=38.51 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 57999999999999999886530 14 358888875
No 443
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.53 E-value=8.5 Score=39.60 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999887653 5 379999983
No 444
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=57.14 E-value=7.1 Score=39.12 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=52.9
Q ss_pred CCCceEEEeC-cchHHHH-HH----HHHHHHHHhhcCCChhhccCe----EEEEcccccccCCCccCCchhchhhccc--
Q 009138 381 LADQRFLFLG-AGEAGTG-IA----ELIALEISKQTNMPLEETRKK----IWLVDSKGLIVSSRLESLQHFKKPWAHE-- 448 (542)
Q Consensus 381 L~d~riv~~G-AGsAg~G-IA----~ll~~~~~~~~G~s~eeAr~~----i~lvDskGLi~~~R~~~l~~~k~~fA~~-- 448 (542)
.+..||.|+| +|..|.. .+ +.+... .++.... ... +.++|++ . +..+.+|+.
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~----~~~~l~~-~~~~~~~~av~~~~-------~----~~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ----GGVRLKN-GDRIMPDPILVGRS-------A----EKVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH----TSEECTT-SCEEEEEEEEECSS-------S----HHHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc----CceeecC-CcccceeeEEEcCC-------H----HHHHHHHHHhC
Confidence 3456999999 9999988 66 444332 2221100 011 1244442 1 112334432
Q ss_pred cCC-CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 449 HEP-VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 449 ~~~-~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
.+. ..++.|.++.-++|+++ +.+.. .+..+++++..+. .++++.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 112 37899999988899888 55544 5666666554432 356554
No 445
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.10 E-value=9 Score=39.33 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 3579999999999999998865 253 689999853
No 446
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=57.09 E-value=5.4 Score=40.36 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=50.5
Q ss_pred ceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
.||.|+|+| .+|...++.|... .++ +-+.++|.+ . +......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH----PDA------QIVAACDPN----E---DVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC----TTE------EEEEEECSC----H---HHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC----CCe------EEEEEEeCC----H---HHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 8887777766431 121 224456652 1 1122222222 122347899999988
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPII 494 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 494 (542)
++|+++ +++.+ .+..+++....+. -++++
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899998 55544 3445555443322 34544
No 447
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=57.04 E-value=8.2 Score=40.47 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=29.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHh-------hcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISK-------QTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~-------~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||...|-.|.+.+.. ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999999775410 0243 688888764
No 448
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=57.00 E-value=9.3 Score=39.55 Aligned_cols=33 Identities=18% Similarity=0.364 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+..++|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----GK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----cC-------EEEEEeCC
Confidence 46899999999999999888653 53 68899984
No 449
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=56.93 E-value=81 Score=31.95 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=82.3
Q ss_pred HHHhcCCCceeeeecCCCccHHHHHHHHcCCCceee--c--CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHH
Q 009138 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--D--DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGT 396 (542)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--D--DiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~ 396 (542)
+-.+| .++ |-+-.++ +.+.+.+.+|-.++||.| | ..|=| =+||=++.-.+..| +|++.||+++|-|.= -
T Consensus 94 vls~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~vGD~~~-~ 166 (310)
T 3csu_A 94 VISTY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQG-RLDNLHVAMVGDLKY-G 166 (310)
T ss_dssp HHTTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHHS-CSSSCEEEEESCTTT-C
T ss_pred HHHHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHhC-CcCCcEEEEECCCCC-C
Confidence 34566 443 4455665 456677788865799999 4 35554 45666666555554 799999999998731 1
Q ss_pred HHHHHHHHHHHhhc-CCChhhccCeEEEEcccccccCCCccCCchhchhhcccc-C---CCCCHHHHHhccCCcEEEEcc
Q 009138 397 GIAELIALEISKQT-NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-E---PVKELVDAVNAIKPTILIGTS 471 (542)
Q Consensus 397 GIA~ll~~~~~~~~-G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~-~---~~~~L~eaV~~vkPtvLIG~S 471 (542)
-+|+-++.++.+ . |+ +|.++-.+|+--. +.-..+|+.. . ...++.|||++ +||+.-..
T Consensus 167 rva~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~ 229 (310)
T 3csu_A 167 RTVHSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTR 229 (310)
T ss_dssp HHHHHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC
T ss_pred chHHHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECC
Confidence 266777777665 4 74 6888888887332 2122233321 1 23689999998 99999775
Q ss_pred CC
Q 009138 472 GQ 473 (542)
Q Consensus 472 ~~ 473 (542)
-+
T Consensus 230 ~q 231 (310)
T 3csu_A 230 VQ 231 (310)
T ss_dssp --
T ss_pred cc
Confidence 43
No 450
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=56.79 E-value=9.6 Score=37.03 Aligned_cols=37 Identities=27% Similarity=0.527 Sum_probs=28.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..+.-|+|+|||+||+..|..|.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999888653 1353 67888875
No 451
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=56.73 E-value=35 Score=33.59 Aligned_cols=93 Identities=13% Similarity=0.217 Sum_probs=51.2
Q ss_pred HHHHHhCCCCCCceEEEe-CcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc--
Q 009138 372 SAMKFLGGSLADQRFLFL-GAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-- 448 (542)
Q Consensus 372 ~Alr~~g~~L~d~riv~~-GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-- 448 (542)
++++..+ ...++++||. |+|..|...++++.. .|. +++.+|+. ..| ++..++.=|..
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~Ga~~~~ 214 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKE-----EGF-------RPIVTVRR----DEQ---IALLKDIGAAHVL 214 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHH-----HTC-------EEEEEESC----GGG---HHHHHHHTCSEEE
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHcCCCEEE
Confidence 5566555 4445777776 788888887766644 262 68887752 222 11111111110
Q ss_pred cCCCCCHHHHHhc----cCCcEEEEccCCCCCCCHHHHHHHH
Q 009138 449 HEPVKELVDAVNA----IKPTILIGTSGQGRTFTKEVVEAMA 486 (542)
Q Consensus 449 ~~~~~~L~eaV~~----vkPtvLIG~S~~~g~Fteevv~~Ma 486 (542)
.....++.+.++. -+.|++|=+++.. ..++.++.|+
T Consensus 215 ~~~~~~~~~~v~~~~~~~g~D~vid~~g~~--~~~~~~~~l~ 254 (349)
T 3pi7_A 215 NEKAPDFEATLREVMKAEQPRIFLDAVTGP--LASAIFNAMP 254 (349)
T ss_dssp ETTSTTHHHHHHHHHHHHCCCEEEESSCHH--HHHHHHHHSC
T ss_pred ECCcHHHHHHHHHHhcCCCCcEEEECCCCh--hHHHHHhhhc
Confidence 1112356665543 3799999877643 2366666665
No 452
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=56.71 E-value=19 Score=35.43 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=29.9
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 370 LISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 370 ll~Alr~~g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
.+.|++..+ --.+++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga-------~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MGY-------RVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CCC-------cEEEEcC
Confidence 355565442 235689999999 8888888776643 352 6888875
No 453
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=56.69 E-value=7.4 Score=41.55 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 34689999999999999988862 1364 688999864
No 454
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=56.68 E-value=6.8 Score=41.19 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 009138 385 RFLFLGAGEAGTGIAELIALEI 406 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~ 406 (542)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 455
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=56.52 E-value=14 Score=37.56 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998764 41 13677887753
No 456
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=56.42 E-value=39 Score=31.40 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=40.5
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHH
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~ea 458 (542)
+|++.++||.||+ -.|..+|+.+++ .|. +++++|++--+ .... -..+.-+..+..++.++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~ 64 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVE-----AGA-------KVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQV 64 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHH
Confidence 4778899999974 334445555443 363 68888875211 0010 00111121222345556
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 009138 459 VNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 459 V~~v-----kPtvLIG~S~~~ 474 (542)
++.+ ++|+||=..+..
T Consensus 65 ~~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 65 CQRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 6544 799999777653
No 457
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=56.41 E-value=19 Score=33.94 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=41.3
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh------cc-ccC
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHE 450 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f------A~-~~~ 450 (542)
.+|++.++||.||+. .|..+|+.++ + .|. +++++|++. +.+......+ .+ +..
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~----~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 63 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMV----A-EGA-------KVVFGDILD-------EEGKAMAAELADAARYVHLDVT 63 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TTC-------EEEEEESCH-------HHHHHHHHHTGGGEEEEECCTT
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHH----H-CCC-------EEEEEeCCH-------HHHHHHHHHhhcCceEEEecCC
Confidence 357788999999753 3444555443 3 363 688887642 1111111111 11 212
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 451 PVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 451 ~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
+..++.++++.+ ++|+||=..+..
T Consensus 64 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 64 QPAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 223456666644 699999777644
No 458
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=56.34 E-value=11 Score=38.81 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999988763 5 368899986
No 459
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=56.23 E-value=8.5 Score=38.18 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=50.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHHhcc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~~v 462 (542)
..||.|+|+|..|...++.+. +..|. +=+.++|++ . +......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~----~~~~~------~lvav~d~~----~---~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT----KSEKL------KLVTCYSRT----E---DKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT----TCSSE------EEEEEECSS----H---HHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHH----hCCCc------EEEEEECCC----H---HHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 368999999997766555442 21121 223466652 1 1122222222 123357999999877
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 495 (542)
++|+++ +.+.. ....+++....+. .++++.
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 95 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCARS-GKHIYV 95 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHHc-CCEEEE
Confidence 799888 45544 4555665554432 355554
No 460
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=56.13 E-value=21 Score=35.30 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCCCCCC--ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 364 SVVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 364 aVvLAgll~Alr~~g~~L~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+.++..+.|+...++--.+ ++++|.|| |..|..+++++.. .|. ++++.+|+.
T Consensus 140 ~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 140 GMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred ccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 34445555666333333356 89999998 9888888776654 363 368887763
No 461
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=55.99 E-value=24 Score=34.69 Aligned_cols=102 Identities=19% Similarity=0.119 Sum_probs=57.3
Q ss_pred ceEEEeCc-chHHHHHHHHHH-HHHHhhcCCChhhccCeEEEEcccccccC-C-C---ccCCch-----------hc---
Q 009138 384 QRFLFLGA-GEAGTGIAELIA-LEISKQTNMPLEETRKKIWLVDSKGLIVS-S-R---LESLQH-----------FK--- 442 (542)
Q Consensus 384 ~riv~~GA-GsAg~GIA~ll~-~~~~~~~G~s~eeAr~~i~lvDskGLi~~-~-R---~~~l~~-----------~k--- 442 (542)
.+|+|.|| |-.|..+++.|+ + .| .+++++|+..--.. . . .+.+.. ..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRD-----TN-------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRY 70 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-----CC-------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHh-----CC-------CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCce
Confidence 48999996 888888888876 3 35 36888876421000 0 0 000100 00
Q ss_pred hhhcc-ccCCCCCHHHHHhccC-CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEc
Q 009138 443 KPWAH-EHEPVKELVDAVNAIK-PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSL 497 (542)
Q Consensus 443 ~~fA~-~~~~~~~L~eaV~~vk-PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaL 497 (542)
..+.. +.....++.++++..+ +|++|=+.+.... -|..++++|.+..-+.|||.=
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEEC
Confidence 11111 1112235777887666 9999988875431 134567777766556788853
No 462
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.97 E-value=12 Score=36.32 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=26.6
Q ss_pred CCCCCceEEEeCcch---HHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..|+++++||-||++ .|.++|+.+++ .|. +++++|++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G~-------~V~~~~r~ 66 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AGA-------ELAFTYQG 66 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TTC-------EEEEEECS
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 468889999999854 56667776654 363 58888875
No 463
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=55.95 E-value=30 Score=32.57 Aligned_cols=94 Identities=15% Similarity=0.211 Sum_probs=53.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhcc
Q 009138 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (542)
Q Consensus 385 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~v 462 (542)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+ .....+.. +..+.. +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFV-NPSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhc-CCCceEEECccccHH-HHhhcCC-
Confidence 7999998 8888888888865 25 3688887642 1111111 11111111 211222 5555553
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009138 463 KPTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 463 kPtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 498 (542)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999988774321 1 235677776666677888554
No 464
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=55.90 E-value=7.5 Score=39.71 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=27.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+..|+|+|||.||+..|..+.+ .|. ++.++|+.--
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 363 6889998653
No 465
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=55.89 E-value=24 Score=33.70 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=58.1
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccC-CCccCC-chhchhhcc-ccCCCCCHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS-SRLESL-QHFKKPWAH-EHEPVKELV 456 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~-~R~~~l-~~~k~~fA~-~~~~~~~L~ 456 (542)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..--.. .+...+ ......+.. +..+..++.
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 34678999987 7788888877765 25 36888887421000 000001 001111111 112224678
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 009138 457 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 498 (542)
Q Consensus 457 eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 498 (542)
++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 80 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 80 RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 88888889999988775421 1235667776654 367887544
No 466
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=55.78 E-value=11 Score=38.89 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=28.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 381 L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
-...+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999988653 53 68888876
No 467
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=55.74 E-value=72 Score=32.39 Aligned_cols=130 Identities=18% Similarity=0.271 Sum_probs=82.8
Q ss_pred HHHhcCCCceeeeecCCCccHHHHHHHHcCCCceeecCC-cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHH
Q 009138 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDI-QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIA 399 (542)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDi-QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAg~GIA 399 (542)
+-.+| .++ |-+--++ +.+.+.+.+|- ++||.|-.- +-=-+=+||=++.-.+..| +|++.||+++|-| --+|
T Consensus 97 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~---~rva 168 (315)
T 1pvv_A 97 VLSRY-VDA-IMARVYD-HKDVEDLAKYA-TVPVINGLSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG---NNVA 168 (315)
T ss_dssp HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC---CHHH
T ss_pred HHHHh-CcE-EEEecCc-hHHHHHHHHhC-CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC---cchH
Confidence 44566 443 3355553 56666677775 589998211 2223456777776666655 7999999999998 3577
Q ss_pred HHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccc-c---CCCCCHHHHHhccCCcEEEEcc
Q 009138 400 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTS 471 (542)
Q Consensus 400 ~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~-~---~~~~~L~eaV~~vkPtvLIG~S 471 (542)
+-++.++.+ .|+ +|.++-.+|+.-.. + +-+.-+.+|+. . ....++.|||++ +||+.-..
T Consensus 169 ~Sl~~~~~~-~g~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy~~~ 231 (315)
T 1pvv_A 169 HSLMIAGTK-LGA-------DVVVATPEGYEPDE--K-VIKWAEQNAAESGGSFELLHDPVKAVKD--ADVIYTDV 231 (315)
T ss_dssp HHHHHHHHH-TTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHTTT--CSEEEECC
T ss_pred HHHHHHHHH-CCC-------EEEEECCccccCCH--H-HHHHHHHHHHHcCCeEEEEeCHHHHhCC--CCEEEEcc
Confidence 888887766 475 68888888874321 1 11112233332 1 123689999998 99999754
No 468
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=55.71 E-value=16 Score=33.53 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=23.5
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++++.++||.|| |-.|..+|+.++ + .| -+++++|++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~----~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFA----T-AG-------ASVVVSDIN 44 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH----T-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH----H-CC-------CEEEEEcCC
Confidence 577889999997 344555555553 3 35 268888864
No 469
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=55.60 E-value=27 Score=34.08 Aligned_cols=48 Identities=21% Similarity=0.174 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
...+.+++..+. -..++++|+|||..|.-.+.++..+ .| .+++.+|+.
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~~ 197 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDIN 197 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEESC
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEECc
Confidence 344566776654 3567999999999887666555432 23 468888763
No 470
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=55.60 E-value=20 Score=34.89 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=54.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhccccCCCCCHHHHH
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV 459 (542)
++..+|+|.|| |-.|..+++.|++ .|. .+++++|+..--. ....+.... +.-+......+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~~~--~~~~~~~~~--~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALND-----KGI------TDILVVDNLKDGT--KFVNLVDLN--IADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC------CCEEEEECCSSGG--GGGGTTTSC--CSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCC------cEEEEEecCCCcc--hhhcccCce--EeeecCcHHHHHHHH
Confidence 55678999998 8888888888765 251 3577777642100 000111110 111111112455666
Q ss_pred hcc---CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009138 460 NAI---KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 498 (542)
Q Consensus 460 ~~v---kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 498 (542)
+.. ++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 59999988875532 13457777765444 7887543
No 471
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=55.58 E-value=10 Score=35.48 Aligned_cols=76 Identities=22% Similarity=0.277 Sum_probs=41.6
Q ss_pred CCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-------ccCC
Q 009138 380 SLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHEP 451 (542)
Q Consensus 380 ~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-------~~~~ 451 (542)
+|+++++||-||+. .|.++|+.++ + .|. +++++|++- +.+......+.. |...
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~----~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 66 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLA----E-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTN 66 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHH----H-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH----H-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCC
Confidence 57788999999854 3444555544 3 363 588887641 112222111111 1122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 452 ~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 67 PESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556544 799999877654
No 472
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=55.56 E-value=7.9 Score=40.45 Aligned_cols=35 Identities=17% Similarity=0.499 Sum_probs=27.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999987754 364 688888875
No 473
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=55.55 E-value=10 Score=39.31 Aligned_cols=35 Identities=14% Similarity=0.360 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..+|+|+|||.||+..|..|.+. |. ++.++++..-
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCC
Confidence 45799999999999999998763 53 5667766543
No 474
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=55.44 E-value=31 Score=34.19 Aligned_cols=97 Identities=10% Similarity=0.056 Sum_probs=52.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc
Q 009138 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (542)
Q Consensus 368 Agll~Alr~~g~~L~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~ 447 (542)
+..+.|++.. .--.+++++|+|||..|...+.++.. .|. +++.+|+. ..| ++..++.=|.
T Consensus 166 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~qlak~-----~Ga-------~Vi~~~~~----~~~---~~~~~~lGa~ 225 (360)
T 1piw_A 166 LTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISKA-----MGA-------ETYVISRS----SRK---REDAMKMGAD 225 (360)
T ss_dssp HHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEESS----STT---HHHHHHHTCS
T ss_pred HHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCC----HHH---HHHHHHcCCC
Confidence 3345566553 23356899999999888877766543 252 48888752 222 1111110011
Q ss_pred c--cCCCC-CHHHHHhccCCcEEEEccCC--CCCCCHHHHHHHH
Q 009138 448 E--HEPVK-ELVDAVNAIKPTILIGTSGQ--GRTFTKEVVEAMA 486 (542)
Q Consensus 448 ~--~~~~~-~L~eaV~~vkPtvLIG~S~~--~g~Fteevv~~Ma 486 (542)
. ..... ++.+.++. +.|++|=+++. +.. .++.++.|+
T Consensus 226 ~v~~~~~~~~~~~~~~~-~~D~vid~~g~~~~~~-~~~~~~~l~ 267 (360)
T 1piw_A 226 HYIATLEEGDWGEKYFD-TFDLIVVCASSLTDID-FNIMPKAMK 267 (360)
T ss_dssp EEEEGGGTSCHHHHSCS-CEEEEEECCSCSTTCC-TTTGGGGEE
T ss_pred EEEcCcCchHHHHHhhc-CCCEEEECCCCCcHHH-HHHHHHHhc
Confidence 0 00012 56666652 68999887765 333 335556654
No 475
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=55.15 E-value=9.5 Score=39.11 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
..|||+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999988765 353 6899997653
No 476
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=55.07 E-value=9.9 Score=36.91 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=26.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhc-cCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEET-RKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA-r~~i~lvDsk 427 (542)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~ 38 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADR 38 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECC
Confidence 589999999999999888664 3100 0 1478899986
No 477
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=54.96 E-value=9.6 Score=36.37 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=24.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.--+||+|||.||+..|-.+.+ .|+ ++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3458999999999988755543 353 68888874
No 478
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=54.86 E-value=9.9 Score=39.29 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4579999999999999987755 353 589999853
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=54.86 E-value=29 Score=32.54 Aligned_cols=75 Identities=17% Similarity=0.270 Sum_probs=41.7
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc----------c
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 448 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~----------~ 448 (542)
.+++.++||.||+ -.|.++|+.+++ .|. +++++|++- +.+......+.. +
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~-----~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 86 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGS-----LGA-------RVVLTARDV-------EKLRAVEREIVAAGGEAESHACD 86 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHH-----CCC-------EEEEEECCH-------HHHHHHHHHHHHhCCceeEEEec
Confidence 4677899999974 445556655543 363 588888742 112222222111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCC
Q 009138 449 HEPVKELVDAVNAI-----KPTILIGTSGQ 473 (542)
Q Consensus 449 ~~~~~~L~eaV~~v-----kPtvLIG~S~~ 473 (542)
.....++.++++.+ ++|+||=..+.
T Consensus 87 ~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 11223455555554 79999987765
No 480
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=54.66 E-value=11 Score=38.65 Aligned_cols=21 Identities=14% Similarity=0.317 Sum_probs=19.2
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 009138 384 QRFLFLGAGEAGTGIAELIAL 404 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~ 404 (542)
.+|+|+|||.||+..|..|.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~ 60 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV 60 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHH
Confidence 589999999999999998865
No 481
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=54.63 E-value=17 Score=34.03 Aligned_cols=82 Identities=13% Similarity=0.199 Sum_probs=40.5
Q ss_pred CCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHH
Q 009138 380 SLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVD 457 (542)
Q Consensus 380 ~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e 457 (542)
+|++.++||.||+. .|..+|+.++ + .|. +++++|++---...-.+.+.. +..+.+ +..+..++.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~----~-~G~-------~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~ 75 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALD----K-AGA-------TVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDA 75 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH----H-TTC-------EEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHH----H-CCC-------EEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHH
Confidence 47788999999753 3444554443 3 363 688887642000000000110 111111 1122234556
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 009138 458 AVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 458 aV~~v-----kPtvLIG~S~~~ 474 (542)
+++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 76 AMQKAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66644 699999877654
No 482
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=54.63 E-value=13 Score=36.61 Aligned_cols=31 Identities=29% Similarity=0.526 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDs 426 (542)
+||-|+|-|..|.++|..|++. |. +++..|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999999763 64 5777775
No 483
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=54.60 E-value=13 Score=34.32 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=23.2
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 380 ~L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++++.++||.||+ -.|..+|+.++ + .|. +++++|++
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~----~-~G~-------~V~~~~r~ 44 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFA----A-SGA-------RLILIDRE 44 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH----H-TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH----H-CCC-------EEEEEeCC
Confidence 5778899999974 33444555544 3 353 68888874
No 484
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=54.44 E-value=7.2 Score=37.71 Aligned_cols=33 Identities=18% Similarity=0.468 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
...|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 468999999999999998885 1 53 688999874
No 485
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.24 E-value=24 Score=33.18 Aligned_cols=37 Identities=27% Similarity=0.270 Sum_probs=24.3
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
.+|++.++||-||+. .|.++|+.+++ .|. +++++|++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAK-----AGA-------SVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 457889999999854 34445555543 363 68888874
No 486
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=54.24 E-value=9.9 Score=36.48 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=27.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
.+..|||+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 356899999999999999887541 14 36888887643
No 487
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=54.22 E-value=11 Score=35.61 Aligned_cols=75 Identities=15% Similarity=0.246 Sum_probs=40.8
Q ss_pred CCCceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhh------cc-ccCCC
Q 009138 381 LADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEPV 452 (542)
Q Consensus 381 L~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~f------A~-~~~~~ 452 (542)
++..++||.||+ -.|..+|+.+++ .| -+++++|++- +.+......+ .+ +....
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~~ 63 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVA-----AG-------DTVIGTARRT-------EALDDLVAAYPDRAEAISLDVTDG 63 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG-------GGGHHHHHHCTTTEEEEECCTTCH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEeCCH-------HHHHHHHHhccCCceEEEeeCCCH
Confidence 456789999874 445556665543 36 3688887641 1122221111 11 11222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 009138 453 KELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 453 ~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
.++.++++.+ ++|+||=+.+..
T Consensus 64 ~~~~~~~~~~~~~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 64 ERIDVVAADVLARYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCE
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 3566666655 799999877643
No 488
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=54.16 E-value=7.3 Score=40.57 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=53.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc-ccCCCCCHHHHHhcc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~-~~~~~~~L~eaV~~v 462 (542)
.+|+|+|.|..|..+|++|.. .|. .+.++|.+- ++-+.+.....+... +......|.++ .--
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-----~g~-------~vvvId~d~----~~v~~~~~~g~~vi~GDat~~~~L~~a-gi~ 67 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-----SGV-------KMVVLDHDP----DHIETLRKFGMKVFYGDATRMDLLESA-GAA 67 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECCH----HHHHHHHHTTCCCEESCTTCHHHHHHT-TTT
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEECCH----HHHHHHHhCCCeEEEcCCCCHHHHHhc-CCC
Confidence 479999999999999999865 354 688888751 111111111111111 11111234444 223
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009138 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (542)
Q Consensus 463 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 499 (542)
+++++|=+.... .-+..++....+.+...-|++.+|
T Consensus 68 ~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 588888665532 334444555555666655666554
No 489
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=54.09 E-value=5.8 Score=40.54 Aligned_cols=34 Identities=38% Similarity=0.506 Sum_probs=25.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988754 364 567777653
No 490
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=54.09 E-value=9.1 Score=39.78 Aligned_cols=36 Identities=28% Similarity=0.456 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 384 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999886630 004 3799999874
No 491
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=54.07 E-value=11 Score=38.23 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=26.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 382 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
++.+|+|+|||.+|+..|..|.+. | .++.++|+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEec
Confidence 346899999999999999988642 4 367777764
No 492
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=53.99 E-value=11 Score=38.58 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=27.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
++||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999997641 13 4789999865
No 493
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.96 E-value=33 Score=32.80 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=43.3
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchhhcc----------
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---------- 447 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~fA~---------- 447 (542)
.+|++.++||-||+. .|.++|+.+ .+ .|. +++++|++ . +.+...+..+..
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~l----a~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~ 88 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAY----AE-AGA-------QVAVAARH----S---DALQVVADEIAGVGGKALPIRC 88 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHH----HH-TTC-------EEEEEESS----G---GGGHHHHHHHHHTTCCCEEEEC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHH----HH-CCC-------EEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEc
Confidence 357889999999753 333444444 33 363 68888874 1 123332222211
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 009138 448 EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (542)
Q Consensus 448 ~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 474 (542)
|.....++.++++.+ ++|+||=..+..
T Consensus 89 Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 89 DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111223456666655 799999777654
No 494
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=53.95 E-value=30 Score=32.36 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=24.4
Q ss_pred CCCCCceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 379 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 379 ~~L~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
..|+++++||-||+. .|.++|+.+++ .|. +++++|++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYAR-----YGA-------TVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 457889999999853 34445555543 363 68888864
No 495
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=53.93 E-value=11 Score=41.69 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=28.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskG 428 (542)
..+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 253 689999864
No 496
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=53.81 E-value=11 Score=38.46 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=27.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGL 429 (542)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999987631 13 47999998653
No 497
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.75 E-value=7.6 Score=38.88 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccc
Q 009138 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (542)
Q Consensus 383 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi 430 (542)
..++||+|||.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999988843 22 78999986543
No 498
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=53.73 E-value=20 Score=34.70 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=59.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCch-----hchhhcc-ccCCCC
Q 009138 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-----FKKPWAH-EHEPVK 453 (542)
Q Consensus 381 L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~-----~k~~fA~-~~~~~~ 453 (542)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+.+.+.. .+..+.. +.....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 8888888888765 25 3688888742 11111110 0111111 112224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 009138 454 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 498 (542)
Q Consensus 454 ~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 498 (542)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 67788888789999988875321 0234566665543 467888655
No 499
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=53.69 E-value=21 Score=34.81 Aligned_cols=101 Identities=9% Similarity=0.061 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhccCeEEEEcccccccCCCccCCchhchh
Q 009138 366 VLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP 444 (542)
Q Consensus 366 vLAgll~Alr~~g~~L~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDskGLi~~~R~~~l~~~k~~ 444 (542)
.++..+.|++..+.--.+++++|.|| |..|..+++++.. .|. +++.+|+. .++ ++..++.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~----~~~---~~~~~~~ 189 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST----EEK---AETARKL 189 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS----HHH---HHHHHHH
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHc
Confidence 34444555553344446789999996 9888888877754 352 68888764 111 1111110
Q ss_pred hccc--cCCCCCHHHHHh----ccCCcEEEEccCCCCCCCHHHHHHHHc
Q 009138 445 WAHE--HEPVKELVDAVN----AIKPTILIGTSGQGRTFTKEVVEAMAS 487 (542)
Q Consensus 445 fA~~--~~~~~~L~eaV~----~vkPtvLIG~S~~~g~Fteevv~~Ma~ 487 (542)
-+.. .....++.+.+. .-+.|++|=+++. ...++.++.|+.
T Consensus 190 g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~--~~~~~~~~~l~~ 236 (333)
T 1wly_A 190 GCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK--DTLQKSLDCLRP 236 (333)
T ss_dssp TCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT--TTHHHHHHTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH--HHHHHHHHhhcc
Confidence 0110 011123333332 2357899876653 445666666653
No 500
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=53.63 E-value=11 Score=39.10 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhccCeEEEEccc
Q 009138 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (542)
Q Consensus 385 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeAr~~i~lvDsk 427 (542)
||.|+|+|..|..+|..++.. |. +++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G~-------~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----GH-------EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988653 53 68888874
Done!