Your job contains 1 sequence.
>009139
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTG
SGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDH
EVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVA
LAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVF
VDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH
AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPT
WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGI
TNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQ
KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT
AG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009139
(542 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169749 - symbol:SS1 "starch synthase 1" speci... 1833 4.3e-189 1
TAIR|locus:2102102 - symbol:SS2 "starch synthase 2" speci... 944 7.7e-97 2
UNIPROTKB|Q42968 - symbol:WAXY "Granule-bound starch synt... 741 2.2e-73 1
TAIR|locus:2037950 - symbol:GBSS1 "granule bound starch s... 724 1.4e-71 1
TIGR_CMR|GSU_1023 - symbol:GSU_1023 "glycogen synthase" s... 468 1.9e-44 1
TIGR_CMR|GSU_3257 - symbol:GSU_3257 "glycogen synthase" s... 409 3.4e-38 1
TIGR_CMR|BA_5120 - symbol:BA_5120 "glycogen synthase" spe... 397 6.3e-37 1
UNIPROTKB|P0A6U8 - symbol:glgA species:83333 "Escherichia... 348 8.7e-31 1
UNIPROTKB|Q9KRB6 - symbol:glgA "Glycogen synthase" specie... 342 1.7e-29 1
TIGR_CMR|VC_1726 - symbol:VC_1726 "glycogen synthase" spe... 342 1.7e-29 1
TAIR|locus:2141936 - symbol:SS4 "starch synthase 4" speci... 323 7.3e-26 1
UNIPROTKB|Q4KCP0 - symbol:glgA "Glycogen synthase" specie... 266 3.9e-20 1
TIGR_CMR|SO_1499 - symbol:SO_1499 "glycogen synthase" spe... 157 5.5e-09 2
DICTYBASE|DDB_G0276105 - symbol:gtr2 "starch synthase-lik... 135 4.8e-07 3
UNIPROTKB|Q9XHN9 - symbol:Q9XHN9 "Granule bound starch sy... 114 6.9e-06 1
>TAIR|locus:2169749 [details] [associations]
symbol:SS1 "starch synthase 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009250 "glucan
biosynthetic process" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0009011
"starch synthase activity" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010021 "amylopectin biosynthetic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019375 "galactolipid
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00152 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AB006701 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP GO:GO:0010021 GO:GO:0019252 EMBL:AY128273 EMBL:AK226881
EMBL:AF121673 IPI:IPI00518916 RefSeq:NP_001190378.1
RefSeq:NP_197818.1 UniGene:At.22528 ProteinModelPortal:Q9FNF2
SMR:Q9FNF2 STRING:Q9FNF2 PaxDb:Q9FNF2 PRIDE:Q9FNF2
EnsemblPlants:AT5G24300.1 EnsemblPlants:AT5G24300.2 GeneID:832497
KEGG:ath:AT5G24300 TAIR:At5g24300 InParanoid:Q9FNF2
PhylomeDB:Q9FNF2 ProtClustDB:CLSN2686324 Genevestigator:Q9FNF2
GermOnline:AT5G24300 Uniprot:Q9FNF2
Length = 652
Score = 1833 (650.3 bits), Expect = 4.3e-189, P = 4.3e-189
Identities = 350/549 (63%), Positives = 424/549 (77%)
Query: 1 MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRS--FTNAX 58
M SLQ++ + ++ F+ FR LGFP ++ + L++RRS F+
Sbjct: 1 MASLQISGSVKFEPFVGFNR---IRHFRPIASLGFPRFRRRFSIGRSLLLRRSSSFSGDS 57
Query: 59 XXXXXXXXXXDAV---SGNISSHDSSSPPVEDEKDENKPGYLLGQE--KDGSGLVIGFHF 113
DA SG++ + PP + + G + E K+ ++ F
Sbjct: 58 RESDEERFITDAERDGSGSVLGFQLT-PPGDQQTVSTSTGEITHHEEKKEAIDQIVMADF 116
Query: 114 IPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDV 173
P G+ V + + ++ G+ KA+ V N+VFVT+EAAPYSKTGGLGDV
Sbjct: 117 GVP-GNRAVEEGAAEV---GIPS-------GKAE--VVNNLVFVTSEAAPYSKTGGLGDV 163
Query: 174 CGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233
CGSLP+ALA RGHRVMV+SPRY NGTAAD+N+ AKDLG + + CFGG QE++F+HEYR
Sbjct: 164 CGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYHEYR 223
Query: 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCI 293
+GVDWVFVDH SYHRPGNPYGD GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEK +
Sbjct: 224 DGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSL 283
Query: 294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGA 353
FLVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPAATY NLGLPSEWYGA
Sbjct: 284 FLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGA 343
Query: 354 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR 413
+ WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEITTVEGGYGL ++LSSR
Sbjct: 344 VGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSR 403
Query: 414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 473
KSV+NGITNGI++ EWNPS+DEHI HYS DD+S K++CK+ALQKELGLPIRP+CP+IGF
Sbjct: 404 KSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGF 463
Query: 474 IGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533
IGRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR E TY+DK+RGWVGFNV
Sbjct: 464 IGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNV 523
Query: 534 PISHRITAG 542
PISHRITAG
Sbjct: 524 PISHRITAG 532
>TAIR|locus:2102102 [details] [associations]
symbol:SS2 "starch synthase 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0009011 "starch synthase activity" evidence=IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC008261 GO:GO:0009501 eggNOG:COG0297 HOGENOM:HOG000294940
KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0010021
GO:GO:0019252 EMBL:AY054467 EMBL:BT002555 IPI:IPI00531533
RefSeq:NP_186767.1 UniGene:At.18317 ProteinModelPortal:Q9MAC8
SMR:Q9MAC8 IntAct:Q9MAC8 STRING:Q9MAC8 PaxDb:Q9MAC8 PRIDE:Q9MAC8
EnsemblPlants:AT3G01180.1 GeneID:820294 KEGG:ath:AT3G01180
TAIR:At3g01180 InParanoid:Q9MAC8 OMA:ECAPFSK PhylomeDB:Q9MAC8
ProtClustDB:CLSN2684979 Genevestigator:Q9MAC8 Uniprot:Q9MAC8
Length = 792
Score = 944 (337.4 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 195/397 (49%), Positives = 251/397 (63%)
Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
N++ V AE AP+SKTGGLGDV G+LP +LA RGHRVMVV PRY A+ + AKDLG
Sbjct: 302 NVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRY-----AE--YAEAKDLG 354
Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDINGAFGDNQFRYTLLC 271
+ G + E+ +FH + +GVD+VF+D P + H N YG G D R L C
Sbjct: 355 VRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYG---GNRLDILKRMVLFC 411
Query: 272 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AA E P +P GG YG+ F+ NDWH L+PV L + YR HG+ K RS+LVIHN+
Sbjct: 412 KAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNI 471
Query: 331 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390
+HQG P + + LPS + + + P GE N+ + ADR+LTVS
Sbjct: 472 AHQGRGPVDDFSYVDLPSHYLDSFKLYDPVG--------GEHFNIFAAGLKAADRVLTVS 523
Query: 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 446
GYSWE+ T+EGG+GLH I++ GI NGID EWNP D ++ S +YS+++L
Sbjct: 524 HGYSWEVKTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENL 583
Query: 447 S-GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 505
GK QCK ALQKELGLP+RPD PLIGFIGRLD+QKG+DLI A P +++ D+Q VMLG+
Sbjct: 584 HIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGT 643
Query: 506 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542
G P E +R E Y+DK RGWVGF+V +HRITAG
Sbjct: 644 GRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAG 680
Score = 38 (18.4 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 80 SSSPPVEDEKDENKPGYLLG 99
+SS E KDE KP L G
Sbjct: 278 ASSETNEPGKDEEKPPPLAG 297
>UNIPROTKB|Q42968 [details] [associations]
symbol:WAXY "Granule-bound starch synthase 1,
chloroplastic/amyloplastic" species:4538 "Oryza glaberrima"
[GO:0004373 "glycogen (starch) synthase activity" evidence=ISS]
[GO:0005982 "starch metabolic process" evidence=ISS] [GO:0009501
"amyloplast" evidence=ISS] InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 GO:GO:0005982
GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252
GO:GO:0033840 EMBL:D10472 ProteinModelPortal:Q42968
EnsemblPlants:ORGLA06G0020500.1 Gramene:Q42968 Uniprot:Q42968
Length = 609
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 170/412 (41%), Positives = 237/412 (57%)
Query: 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTL 207
T N+VFV AE AP+SKTGGLGDV G LP A+AA GHRVMV+SPRY + +
Sbjct: 79 TGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY-------DQYKD 131
Query: 208 AKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-----HRPGNP-YGDINGA-F 260
A D +I + + FFH Y+ GVD VF+DHPS+ + G YG G +
Sbjct: 132 AWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDY 191
Query: 261 GDNQFRYTLLCYAACEAPLVLPLGG---F--TYGEKCIFLVNDWHAGLVPVLLASKYRPH 315
DNQ R++LLC AA EAP +L L F TYGE +F+ NDWH G + L + Y+P+
Sbjct: 192 KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPN 251
Query: 316 GVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT---GEA 372
G+Y++A+ IHN+S+QG Y L L + + +++ DT G
Sbjct: 252 GIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI-------DGYDTPVEGRK 304
Query: 373 VNVLKGAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNP 431
+N +K I+ ADR+LTVS Y+ E I+ + G L I+ R + + GI NG+D++EW+P
Sbjct: 305 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIM--RLTGITGIVNGMDVSEWDP 362
Query: 432 SSDEHIASHYSIDD-LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAA 490
S D++I + Y + K K ALQ E GLP+ PLI FIGRL+ QKG D++ A
Sbjct: 363 SKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAI 422
Query: 491 PEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542
PE++ +D+Q V+LG+G +FE ++ E Y K R V FN P++H I AG
Sbjct: 423 PELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 474
>TAIR|locus:2037950 [details] [associations]
symbol:GBSS1 "granule bound starch synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0009011 "starch synthase
activity" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009250 "glucan biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC006424 eggNOG:COG0297 HOGENOM:HOG000294940 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252 EMBL:AY094405
EMBL:AY123983 EMBL:AY149948 EMBL:AY088544 IPI:IPI00520957
PIR:F86453 RefSeq:NP_174566.1 UniGene:At.11953
ProteinModelPortal:Q9MAQ0 SMR:Q9MAQ0 IntAct:Q9MAQ0 STRING:Q9MAQ0
PaxDb:Q9MAQ0 PRIDE:Q9MAQ0 EnsemblPlants:AT1G32900.1 GeneID:840184
KEGG:ath:AT1G32900 TAIR:At1g32900 InParanoid:Q9MAQ0 KO:K13679
OMA:ERYPQNI PhylomeDB:Q9MAQ0 ProtClustDB:CLSN2682839
Genevestigator:Q9MAQ0 GermOnline:AT1G32900 GO:GO:0009568
GO:GO:0033840 Uniprot:Q9MAQ0
Length = 610
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 170/431 (39%), Positives = 247/431 (57%)
Query: 126 SKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG 185
+K + K+ V+ K +++F+ AE P+SKTGGLGDV G LP ALAARG
Sbjct: 58 AKPVSAKSSKRSSKVKTAGKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARG 117
Query: 186 HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 245
HRVM + PRY + + A D ++I + + FFH Y+ GVD VFVDHP
Sbjct: 118 HRVMTICPRY-------DQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPI 170
Query: 246 Y-----HRPGNP-YGDINGA-FGDNQFRYTLLCYAACEAPLVLPLGG---FT--YGEKCI 293
+ + G+ YG I G + DNQ R++LLC AA EAP VL L F+ YGE +
Sbjct: 171 FLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVV 230
Query: 294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGA 353
F+ NDWH L+P L S Y+ GVY +A+ + IHN+++QG Y L LP + +
Sbjct: 231 FVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSS 290
Query: 354 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSS 412
+++ + + G +N +K AI+ A R+LTVS Y+ E I+ V+ G LH+ L
Sbjct: 291 FDFM-DGYEKPVK---GRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYL-- 344
Query: 413 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS-GKVQCKIALQKELGLPIRPDCPLI 471
R ++GI NG+D+ EWNPS+D++I Y I ++ K K ALQ +GLP+ D P+I
Sbjct: 345 RMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVI 404
Query: 472 GFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 531
GFIGRL+ QKG D++ A + + ++Q V+LG+G + E+ + + E + K G F
Sbjct: 405 GFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKF 464
Query: 532 NVPISHRITAG 542
NVP++H ITAG
Sbjct: 465 NVPLAHMITAG 475
>TIGR_CMR|GSU_1023 [details] [associations]
symbol:GSU_1023 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 RefSeq:NP_952077.1 ProteinModelPortal:Q74ED9
GeneID:2685960 KEGG:gsu:GSU1023 PATRIC:22024816 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 OMA:IYFIDHE ProtClustDB:CLSK924464
BioCyc:GSUL243231:GH27-1018-MONOMER GO:GO:0009011
TIGRFAMs:TIGR02095 Uniprot:Q74ED9
Length = 501
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 103/250 (41%), Positives = 143/250 (57%)
Query: 293 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYG 352
+F +DWH VPV L + YR + A S+L +HN+ HQG + LG+ E +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEHFT 198
Query: 353 ALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS 412
L L+ N+LKG + A L TVS+GY+ E+ T E G+GL ++ +
Sbjct: 199 FL-----------GLEKDNQTNLLKGGLYHATVLNTVSEGYAREMQTPEYGWGLDGVVRA 247
Query: 413 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472
R + L GI NG+D EWNP +D HI ++YS DLSGK CK +Q+ GLP R D PL G
Sbjct: 248 RSADLVGILNGVDYEEWNPETDPHIVANYSRSDLSGKKLCKRDVQRFFGLPERDDVPLFG 307
Query: 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN 532
+GRL QKGID++ A ILA D+Q VMLG+G+P + D Y +K+ ++G+N
Sbjct: 308 LVGRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYN 367
Query: 533 VPISHRITAG 542
+SHRI AG
Sbjct: 368 NGLSHRIEAG 377
Score = 231 (86.4 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 63/184 (34%), Positives = 85/184 (46%)
Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
NI+ +E P++K GGL DV G LP LA GH V VV P Y E F L + G
Sbjct: 5 NILMAASECVPFAKEGGLADVVGVLPKYLAHMGHDVRVVMPLY--SRIDPERFGLERLPG 62
Query: 213 CCMKICCFGGEQEIAFFHEYREG--VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLL 270
+ G Q + G V F++H Y+ Y + N + DN R+ L
Sbjct: 63 VLVVPMGIMGNQYCGVWEGRLPGSAVPVYFLEHEGYYGREGLYEEDNVGYMDNDNRFIFL 122
Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AA E P ++ GF +F +DWH VPV L + YR + A S+L +HN+
Sbjct: 123 SRAAMELPKLI---GFAPD---VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNM 176
Query: 331 SHQG 334
HQG
Sbjct: 177 QHQG 180
>TIGR_CMR|GSU_3257 [details] [associations]
symbol:GSU_3257 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_954298.1
ProteinModelPortal:Q747K8 GeneID:2685785 KEGG:gsu:GSU3257
PATRIC:22029355 OMA:DEWNPAA ProtClustDB:CLSK829188
BioCyc:GSUL243231:GH27-3233-MONOMER Uniprot:Q747K8
Length = 484
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 92/246 (37%), Positives = 136/246 (55%)
Query: 297 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 356
+DW L+P++L + + ++ IHNL++QG+ PA GLPS + EW
Sbjct: 137 HDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSALF-TTEW 195
Query: 357 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 416
L+ +N++KGAI+TAD + TVS+ Y EI T G GL +L+ R
Sbjct: 196 ----------LEYYGQLNLMKGAILTADLITTVSETYRREIMTPTQGCGLEGVLARRGDD 245
Query: 417 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGR 476
L GI NGID EWNP++D+ I +YS L+GK K+ LQ+ELG+P P PLIG + R
Sbjct: 246 LFGIVNGIDTDEWNPAADKRIFRNYSARALAGKAADKLELQRELGMPAAPSVPLIGMVSR 305
Query: 477 LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 536
L QKGIDL+ P + ++QFV+LG+G+ + + + +GFN P++
Sbjct: 306 LAEQKGIDLVLELLPRLAESELQFVLLGTGNACYLERLNSFRSKGAANISINLGFNDPLA 365
Query: 537 HRITAG 542
+I AG
Sbjct: 366 PKIYAG 371
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGC 213
++ V +E AP+++TGGL +V +LP AL GH V V+ P Y AA + K
Sbjct: 3 VLMVASEVAPFARTGGLAEVTAALPAALRRMGHDVRVIMPFY--RCAAQTELGVRKARKS 60
Query: 214 CMKICCFGGEQEIAFFHEYREG-VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 272
GE F + G V V++ + YG G + DN R+ C
Sbjct: 61 AE--VSLNGETHKGFLRQAALGDVPVYLVENREFFSRDYLYGTPEGDYPDNPRRFAFFCR 118
Query: 273 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 332
+ + L + I +DW L+P++L + + ++ IHNL++
Sbjct: 119 SVLQF-----LKRMDFRPDVIHC-HDWQTALIPIILRLEAADDPFFARTATVFTIHNLAY 172
Query: 333 QGVEPAATYKNLGLPSEWYGALEWV 357
QG+ PA GLPS + EW+
Sbjct: 173 QGLFPAPAIAETGLPSALF-TTEWL 196
>TIGR_CMR|BA_5120 [details] [associations]
symbol:BA_5120 "glycogen synthase" species:198094 "Bacillus
anthracis str. Ames" [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] [GO:0009011 "starch synthase activity" evidence=ISS]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_847306.1
RefSeq:YP_021773.2 RefSeq:YP_031002.1 ProteinModelPortal:Q81K85
IntAct:Q81K85 DNASU:1084436 EnsemblBacteria:EBBACT00000008312
EnsemblBacteria:EBBACT00000017669 EnsemblBacteria:EBBACT00000022941
GeneID:1084436 GeneID:2819822 GeneID:2849958 KEGG:ban:BA_5120
KEGG:bar:GBAA_5120 KEGG:bat:BAS4758 OMA:ADVIMVP
ProtClustDB:PRK00654 BioCyc:BANT260799:GJAJ-4812-MONOMER
BioCyc:BANT261594:GJ7F-4972-MONOMER Uniprot:Q81K85
Length = 476
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 87/246 (35%), Positives = 135/246 (54%)
Query: 297 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 356
+DWH +V LL KY+ + +Y+ +++ IHNL QGV P P Y LE
Sbjct: 132 HDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFP---------PEVMYDLLE- 181
Query: 357 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 416
+ + + L+ VN +KG I+ +D++ VS Y EI G L +L
Sbjct: 182 LGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDK 241
Query: 417 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGR 476
L+GI NGID + +NP +D +I + Y D L K + K ALQ+ GLP + D P+I + R
Sbjct: 242 LSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVTR 301
Query: 477 LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 536
L QKG+DL+R EI+ +D+Q ++LGSGD ++E + Y +K + ++GFN ++
Sbjct: 302 LTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELA 361
Query: 537 HRITAG 542
H++ AG
Sbjct: 362 HQVYAG 367
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/201 (27%), Positives = 91/201 (45%)
Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY-FNGTAADENFTLAKDL 211
NI+F +E P+ K+GGL DV G+LP L G V ++ P Y + TL K
Sbjct: 2 NILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHK-- 59
Query: 212 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLC 271
+ + Q ++G+ + +D+ Y + + YG + D + R++
Sbjct: 60 --VINVPLGWRNQYCGILKGEQDGITYYLIDNEYYFKRDSLYGH----YDDGE-RFSYFS 112
Query: 272 YAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS 331
A E +P F E + +DWH +V LL KY+ + +Y+ +++ IHNL
Sbjct: 113 KAVLEC---IPHLDF---EVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQ 166
Query: 332 HQGV-EPAATYKNLGLPSEWY 351
QGV P Y L L E++
Sbjct: 167 FQGVFPPEVMYDLLELGDEYF 187
>UNIPROTKB|P0A6U8 [details] [associations]
symbol:glgA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0009011 "starch synthase activity" evidence=IEA;IDA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA;IMP]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0005978 GO:GO:0006974 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP ProtClustDB:PRK00654 EMBL:V00281 EMBL:J02616
EMBL:J01616 PIR:H65138 RefSeq:NP_417887.1 RefSeq:YP_492004.1
PDB:2QZS PDB:2R4T PDB:2R4U PDB:3COP PDB:3CX4 PDB:3D1J PDB:3GUH
PDBsum:2QZS PDBsum:2R4T PDBsum:2R4U PDBsum:3COP PDBsum:3CX4
PDBsum:3D1J PDBsum:3GUH ProteinModelPortal:P0A6U8 SMR:P0A6U8
IntAct:P0A6U8 PRIDE:P0A6U8 EnsemblBacteria:EBESCT00000004694
EnsemblBacteria:EBESCT00000004695 EnsemblBacteria:EBESCT00000004696
EnsemblBacteria:EBESCT00000016997 GeneID:12933507 GeneID:947932
KEGG:ecj:Y75_p3748 KEGG:eco:b3429 PATRIC:32122298 EchoBASE:EB0372
EcoGene:EG10377 HOGENOM:HOG000294941
BioCyc:EcoCyc:GLYCOGENSYN-MONOMER BioCyc:ECOL316407:JW3392-MONOMER
BioCyc:MetaCyc:GLYCOGENSYN-MONOMER EvolutionaryTrace:P0A6U8
Genevestigator:P0A6U8 Uniprot:P0A6U8
Length = 477
Score = 348 (127.6 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 84/248 (33%), Positives = 126/248 (50%)
Query: 297 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 356
+DWHAGL P LA++ RP A+S+ +HNL++QG+ A ++ LP W
Sbjct: 136 HDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP--------W 181
Query: 357 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR--K 414
F H L+ ++ LK + AD + VS Y+ EIT + YG+ +L R +
Sbjct: 182 SF---FNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHRE 238
Query: 415 SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI 474
L+G+ NG+D W+P +D +AS Y+ D L K + K LQ +GL + PL +
Sbjct: 239 GRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVV 298
Query: 475 GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 534
RL QKG+DL+ A P +L Q +LG+GDP + A Y + +G++
Sbjct: 299 SRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEA 358
Query: 535 ISHRITAG 542
SHRI G
Sbjct: 359 FSHRIMGG 366
Score = 220 (82.5 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/202 (32%), Positives = 95/202 (47%)
Query: 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY--FNGTAADENFTLAKDL 211
++ V +E P KTGGL DV G+LP A A G V+ P + D +D
Sbjct: 3 VLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDT 62
Query: 212 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-YHRPGNPYGDIN-GAFGDNQFRYTL 269
F G + F H Y GV +D P Y RPG+PY D N A+ DN R+ L
Sbjct: 63 --------FAGHITLLFGH-YN-GVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFAL 112
Query: 270 LCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHN 329
L + E + G + + +DWHAGL P LA++ RP A+S+ +HN
Sbjct: 113 LGWVGAE----MASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHN 162
Query: 330 LSHQGVEPAATYKNLGLPSEWY 351
L++QG+ A ++ LP ++
Sbjct: 163 LAYQGMFYAHHMNDIQLPWSFF 184
>UNIPROTKB|Q9KRB6 [details] [associations]
symbol:glgA "Glycogen synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004373 "glycogen
(starch) synthase activity" evidence=ISS] [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005978 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165 RefSeq:NP_231362.1
ProteinModelPortal:Q9KRB6 DNASU:2613731 GeneID:2613731
KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT Uniprot:Q9KRB6
Length = 484
Score = 342 (125.4 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 89/274 (32%), Positives = 143/274 (52%)
Query: 273 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 332
AAC VLP G + I NDWH GLVP LL ++YR ++ +S+L +HN
Sbjct: 118 AACLD--VLPKLGI---QPDIIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIF 172
Query: 333 QGVEPAATYKNLG-LPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391
+G+ +Y L +P +E F + H V++L+ I AD++ VS
Sbjct: 173 KGI---FSYHQLEVIPELNLSGME--FLQYGHDH-------VSMLRAGIAFADKVNAVSP 220
Query: 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS---G 448
Y+ E+ T G +GL + R L+GI NG D +EWNP +D ++ + YS + S G
Sbjct: 221 NYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKG 280
Query: 449 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 508
K CK ALQ+EL LP+ D PL G + RL +QKG + + L +++Q V++G+G+P
Sbjct: 281 KALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEP 339
Query: 509 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542
+ + + ++ K+ ++ ++H + AG
Sbjct: 340 EVAARLNKIAHYHRAKFAFVETYSERLAHWVEAG 373
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 58/185 (31%), Positives = 87/185 (47%)
Query: 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL 211
+N+ F +E K+GGL DV +LP AL A +V + P Y E+ L +
Sbjct: 4 FNVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAY-RSVPGKEDAELVLET 62
Query: 212 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH-RPGNPYGDINGAFGDNQFRYTLL 270
++ + Q + +GV +D P+Y RP Y + N A+ DN R+
Sbjct: 63 ----ELTHWPHTQYRVLKRDL-DGVPIYLIDCPAYFDRPAL-YAENNQAYADNGERFGFF 116
Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AAC VLP G + I NDWH GLVP LL ++YR ++ +S+L +HN
Sbjct: 117 S-AACLD--VLPKLGI---QPDIIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNA 170
Query: 331 SHQGV 335
+G+
Sbjct: 171 IFKGI 175
>TIGR_CMR|VC_1726 [details] [associations]
symbol:VC_1726 "glycogen synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004373 "glycogen (starch) synthase
activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 KO:K00703 GO:GO:0009011
TIGRFAMs:TIGR02095 ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165
RefSeq:NP_231362.1 ProteinModelPortal:Q9KRB6 DNASU:2613731
GeneID:2613731 KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT
Uniprot:Q9KRB6
Length = 484
Score = 342 (125.4 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 89/274 (32%), Positives = 143/274 (52%)
Query: 273 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 332
AAC VLP G + I NDWH GLVP LL ++YR ++ +S+L +HN
Sbjct: 118 AACLD--VLPKLGI---QPDIIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIF 172
Query: 333 QGVEPAATYKNLG-LPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391
+G+ +Y L +P +E F + H V++L+ I AD++ VS
Sbjct: 173 KGI---FSYHQLEVIPELNLSGME--FLQYGHDH-------VSMLRAGIAFADKVNAVSP 220
Query: 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS---G 448
Y+ E+ T G +GL + R L+GI NG D +EWNP +D ++ + YS + S G
Sbjct: 221 NYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKG 280
Query: 449 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 508
K CK ALQ+EL LP+ D PL G + RL +QKG + + L +++Q V++G+G+P
Sbjct: 281 KALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEP 339
Query: 509 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542
+ + + ++ K+ ++ ++H + AG
Sbjct: 340 EVAARLNKIAHYHRAKFAFVETYSERLAHWVEAG 373
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 58/185 (31%), Positives = 87/185 (47%)
Query: 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL 211
+N+ F +E K+GGL DV +LP AL A +V + P Y E+ L +
Sbjct: 4 FNVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAY-RSVPGKEDAELVLET 62
Query: 212 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH-RPGNPYGDINGAFGDNQFRYTLL 270
++ + Q + +GV +D P+Y RP Y + N A+ DN R+
Sbjct: 63 ----ELTHWPHTQYRVLKRDL-DGVPIYLIDCPAYFDRPAL-YAENNQAYADNGERFGFF 116
Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AAC VLP G + I NDWH GLVP LL ++YR ++ +S+L +HN
Sbjct: 117 S-AACLD--VLPKLGI---QPDIIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNA 170
Query: 331 SHQGV 335
+G+
Sbjct: 171 IFKGI 175
>TAIR|locus:2141936 [details] [associations]
symbol:SS4 "starch synthase 4" species:3702 "Arabidopsis
thaliana" [GO:0009011 "starch synthase activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009250
"glucan biosynthetic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=ISS] [GO:0005982 "starch
metabolic process" evidence=RCA;IMP] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0001666 "response to hypoxia"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR013534 Pfam:PF08323
EMBL:AL161548 GO:GO:0009501 GO:GO:0005982 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0019252 EMBL:AL021713 EMBL:AK226610
IPI:IPI00524471 PIR:T04926 RefSeq:NP_193558.3 UniGene:At.46236
ProteinModelPortal:Q0WVX5 STRING:Q0WVX5 PRIDE:Q0WVX5
EnsemblPlants:AT4G18240.1 GeneID:827550 KEGG:ath:AT4G18240
TAIR:At4g18240 InParanoid:Q0WVX5 OMA:LVGCITR PhylomeDB:Q0WVX5
ProtClustDB:PLN02939 Genevestigator:Q0WVX5 Uniprot:Q0WVX5
Length = 1040
Score = 323 (118.8 bits), Expect = 7.3e-26, P = 7.3e-26
Identities = 88/249 (35%), Positives = 123/249 (49%)
Query: 297 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 356
+DW V L Y P G+ AR HN +QG A+ + GL
Sbjct: 677 HDWQTAFVAPLYWDLYAPKGL-DSARICFTCHNFEYQGTASASELGSCGLDVNQLNR--- 732
Query: 357 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 416
P + H+ +G+ VN +KGAI+ ++ + TVS Y+ E+ T EGG GLH L+
Sbjct: 733 --PDRMQDHS--SGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKK 788
Query: 417 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC-PLIGFIG 475
GI NGID WNP++D + + ++ DL GK + K AL+K+LGL PL+G I
Sbjct: 789 FIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGCIT 848
Query: 476 RLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFN 532
RL QKG+ LIR A L QFV+LGS P + E +K D R + ++
Sbjct: 849 RLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLLKYD 908
Query: 533 VPISHRITA 541
+SH I A
Sbjct: 909 EALSHTIYA 917
Score = 143 (55.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 58/196 (29%), Positives = 86/196 (43%)
Query: 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGC 213
+V + AE AP +K GGLGDV L AL +GH V ++ P+Y + D L + L
Sbjct: 544 VVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKY-DCMQYDRVRDL-RALDT 601
Query: 214 CMKICCFGGEQEIAFFHEYREGVDWVFVD--HPS-YHRPGNPYGDINGAFGDNQFRYTLL 270
++ G + + EG+ F++ HPS + G YG+ D+ R++
Sbjct: 602 VVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGE-----QDDFRRFSYF 656
Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AA E L+L G + I +DW V L Y P G+ AR HN
Sbjct: 657 SRAALE--LLLQSGK----KPDIIHCHDWQTAFVAPLYWDLYAPKGL-DSARICFTCHNF 709
Query: 331 SHQGVEPAATYKNLGL 346
+QG A+ + GL
Sbjct: 710 EYQGTASASELGSCGL 725
>UNIPROTKB|Q4KCP0 [details] [associations]
symbol:glgA "Glycogen synthase" species:220664 "Pseudomonas
protegens Pf-5" [GO:0004373 "glycogen (starch) synthase activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978 EMBL:CP000076
GenomeReviews:CP000076_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 HOGENOM:HOG000294941 RefSeq:YP_259993.2
STRING:Q4KCP0 GeneID:3477958 KEGG:pfl:PFL_2887 PATRIC:19875075
BioCyc:PFLU220664:GIX8-2901-MONOMER GO:GO:0004373 Uniprot:Q4KCP0
Length = 522
Score = 266 (98.7 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 78/245 (31%), Positives = 119/245 (48%)
Query: 300 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFP 359
HA P LA Y H + ++ IHNL++QGV A+ LG+P AL+
Sbjct: 180 HAHDWPAGLAPAYM-HWRGQRTPTLFTIHNLAYQGVVSLASCPELGIPEH---ALQ---- 231
Query: 360 TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR--KSVL 417
++ ++ LK + A + TVS Y+ EITT G GL L+S+ + +L
Sbjct: 232 ----QEGMEFYGKLSFLKAGMAYASHITTVSATYAQEITTPAFGCGLDGFLASKTQQGLL 287
Query: 418 NGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRL 477
+GI NGID W+ ++D H+ + +SI D GK +++ GL PL + RL
Sbjct: 288 SGIPNGID-ESWDAATDAHLLTPFSIGDWDGKAANAAHVRQMFGLDASSG-PLFAVVSRL 345
Query: 478 DYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 537
YQKG+DL A I+ Q ++G G+P+ E MR + + +GFN +
Sbjct: 346 VYQKGLDLTEAVAEFIVQSGGQIAIIGRGEPEEEQSMRALARRFPGRIGVHIGFNETDAR 405
Query: 538 RITAG 542
R+ AG
Sbjct: 406 RMFAG 410
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 67/215 (31%), Positives = 100/215 (46%)
Query: 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGC 213
++FVT+E A KTGGLGDV +LP A+A H V V+ P Y ++ + +LG
Sbjct: 46 VLFVTSEIADLVKTGGLGDVSAALPRAMAHL-HDVRVLIPGYPQVLHSENPIHIIGELGG 104
Query: 214 CMKI-CCFGGEQEIAFFHEYREG-VDWVFVDHPSYHRPGNPYGDINGA-FGDNQFRYTLL 270
+ C G ++ +G V +V + Y R G PYG NG + DN R+ L
Sbjct: 105 HAALPACKIGRMDMP------DGLVIYVLICPELYEREGTPYGANNGRDWPDNHIRFARL 158
Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
AA A + L + + +DW AGL P + H + ++ IHNL
Sbjct: 159 GLAA--ADIAANLAQIHWCPDLVH-AHDWPAGLAPAYM------HWRGQRTPTLFTIHNL 209
Query: 331 SHQGVEPAATYKNLGLPS--------EWYGALEWV 357
++QGV A+ LG+P E+YG L ++
Sbjct: 210 AYQGVVSLASCPELGIPEHALQQEGMEFYGKLSFL 244
>TIGR_CMR|SO_1499 [details] [associations]
symbol:SO_1499 "glycogen synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
GO:GO:0009058 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR013534 Pfam:PF08323 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 RefSeq:NP_717116.1 ProteinModelPortal:Q8EGU2
GeneID:1169309 KEGG:son:SO_1499 PATRIC:23522640 OMA:TKFAFLC
ProtClustDB:CLSK906292 Uniprot:Q8EGU2
Length = 534
Score = 157 (60.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 81/294 (27%), Positives = 123/294 (41%)
Query: 154 IVFVTAE--AAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL 211
I+ V AE A +K GG+ DV LP ALA G + V+ P Y TA AK +
Sbjct: 4 ILMVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADVIMPSYGFLTAQG-----AKQI 58
Query: 212 GCCMKICCFGGEQEIAFF---HEYREGVDWVFVDHPSYHR-PGNPY--GDINGAFGDNQF 265
G + G + I + H G + ++H + PG Y G + F D+
Sbjct: 59 GE-FDVSFAGRHELIKLYWLAHPLVPGANIYLLEHGLWQSIPGQIYSQGTKDRPFADDAT 117
Query: 266 RYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL--LASKYRPHGVYKDARS 323
++ LC + +A LV G + + L +DWH G + +L LA +Y+ +
Sbjct: 118 KFAFLCVSVAKA-LVT---GLVPMPQLLHL-HDWHTGCLAMLRALAPEYQ---ALQAIEC 169
Query: 324 ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG--EAVNVLKGAIV 381
+ IHNL+ QG+ P + + W+ +L +D +N ++ I
Sbjct: 170 VFSIHNLALQGIRPLG--HDASSFAAWFPSLFAHLDVTQLADIIDPRYPHCINPMRMGIR 227
Query: 382 TADRLLTVSKGYSWEITTVE-------GGYGLHEILSSRKS---VLNGITNGID 425
ADR+ VS Y+ E+ GG GL L + VL GI NG D
Sbjct: 228 LADRVHLVSPTYAKEVLLPSQPERGFFGGEGLEADLQHKADQGRVL-GILNGCD 280
Score = 54 (24.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 500 FVMLGSGDPQFESWMRDTEATY 521
FV+LGSGDP+ + + A Y
Sbjct: 388 FVLLGSGDPEIGQFFQTLAAKY 409
>DICTYBASE|DDB_G0276105 [details] [associations]
symbol:gtr2 "starch synthase-like protein"
species:44689 "Dictyostelium discoideum" [GO:0043169 "cation
binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001296
InterPro:IPR006047 InterPro:IPR013781 Pfam:PF00128 Pfam:PF00534
dictyBase:DDB_G0276105 GO:GO:0009058 GO:GO:0003824 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005975
EMBL:AAFI02000014 GenomeReviews:CM000151_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 RefSeq:XP_643268.1
ProteinModelPortal:Q75JH8 EnsemblProtists:DDB0231973 GeneID:8620311
KEGG:ddi:DDB_G0276105 InParanoid:Q75JH8 OMA:RAINIFN
ProtClustDB:CLSZ2430914 Uniprot:Q75JH8
Length = 2473
Score = 135 (52.6 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 66/251 (26%), Positives = 105/251 (41%)
Query: 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGC 213
IVFVT E +S GG+G + L +L G V ++SP Y G + L K+ G
Sbjct: 1950 IVFVTPEIGRFSTVGGVGVMLDELTRSLQLLGCEVHIISPYYNYGKGGRTGY-LEKEEGI 2008
Query: 214 CMK--ICCFGGEQEIAF-FHEYRE-GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTL 269
K + + G + HE + G+ F+ H Y P PY N +Q + T+
Sbjct: 2009 RWKRNVLTYVGPDRVEVGVHEGMDKGIHLHFLHHFEYF-P-TPY---NSGSPIHQLK-TI 2062
Query: 270 LCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL-VIH 328
+ +A L+ L + + NDW GLVP +K G + + ++H
Sbjct: 2063 VLFAKASLELLCQLRILP----SVVVTNDWFTGLVPGY--AKSGAFGTTFNGTTFFHLVH 2116
Query: 329 NL--SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 386
NL ++QG Y + G W L +H L +N + A++T +
Sbjct: 2117 NLEEAYQG----RIYPDSGDDLNWIHHLHRELIVDPYSHQL----CLNASRCALLTCNNW 2168
Query: 387 LTVSKGYSWEI 397
TVSK Y +++
Sbjct: 2169 GTVSKSYLYDL 2179
Score = 82 (33.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 373 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS 432
+N + A++T + TVSK Y +++ L +L +NGI + E +
Sbjct: 2155 LNASRCALLTCNNWGTVSKSYLYDLLRTSH---LANLLHRFPEAF-AHSNGIRVKERKQA 2210
Query: 433 SDEHIASHYSIDDLSGKVQCKIALQKE-LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAP 491
H+S K LQK+ GL + P++ F+GR+ QKG+ LI A
Sbjct: 2211 MKAVSTDHWS---------AKAELQKKYFGL-VDKSIPVLSFVGRIVLQKGVHLILNAVR 2260
Query: 492 EIL 494
E++
Sbjct: 2261 ELI 2263
Score = 39 (18.8 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 69 DAVSGNISSHDSSSPPVEDEKDE 91
D+ S + SS + + P + DE ++
Sbjct: 1275 DSASSSSSSINDNQPMISDENEK 1297
>UNIPROTKB|Q9XHN9 [details] [associations]
symbol:Q9XHN9 "Granule bound starch synthase" species:39947
"Oryza sativa Japonica Group" [GO:0005982 "starch metabolic
process" evidence=IEP] GO:GO:0009507 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 GO:GO:0005982 EMBL:AF092444 STRING:Q9XHN9
Gramene:Q9XHN9 Uniprot:Q9XHN9
Length = 113
Score = 114 (45.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA 182
T N+VFV AE AP+SKTGGLGDV G LP A+A
Sbjct: 79 TGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMA 113
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 542 531 0.00092 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 624 (66 KB)
Total size of DFA: 344 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.42u 0.12s 43.54t Elapsed: 00:00:07
Total cpu time: 43.42u 0.12s 43.54t Elapsed: 00:00:08
Start: Tue May 21 04:30:56 2013 End: Tue May 21 04:31:04 2013