Query 009139
Match_columns 542
No_of_seqs 259 out of 1972
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:42:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 1.1E-47 3.6E-52 421.3 36.5 383 147-541 5-400 (536)
2 1rzu_A Glycogen synthase 1; gl 100.0 3.3E-33 1.1E-37 300.9 28.7 362 152-541 1-365 (485)
3 2qzs_A Glycogen synthase; glyc 100.0 5.5E-33 1.9E-37 299.2 30.1 360 152-540 1-365 (485)
4 3fro_A GLGA glycogen synthase; 100.0 2.5E-29 8.6E-34 265.0 33.1 322 150-541 1-330 (439)
5 3c48_A Predicted glycosyltrans 99.9 8.4E-24 2.9E-28 223.9 27.8 292 147-541 16-325 (438)
6 2r60_A Glycosyl transferase, g 99.9 9E-23 3.1E-27 220.5 26.6 305 150-541 6-354 (499)
7 3okp_A GDP-mannose-dependent a 99.9 3.8E-22 1.3E-26 207.2 24.7 264 150-541 3-272 (394)
8 3s28_A Sucrose synthase 1; gly 99.9 1.2E-22 4.3E-27 230.8 19.9 324 150-540 277-662 (816)
9 2iw1_A Lipopolysaccharide core 99.9 4.5E-23 1.5E-27 212.9 11.6 263 152-541 1-270 (374)
10 2jjm_A Glycosyl transferase, g 99.9 3E-21 1E-25 201.7 24.5 269 151-541 13-284 (394)
11 2gek_A Phosphatidylinositol ma 99.8 5.7E-20 2E-24 191.7 20.2 262 147-541 16-282 (406)
12 2x6q_A Trehalose-synthase TRET 99.8 4.7E-20 1.6E-24 194.0 18.3 263 150-541 39-315 (416)
13 2iuy_A Avigt4, glycosyltransfe 99.8 4.7E-20 1.6E-24 188.9 17.2 216 151-541 3-231 (342)
14 3nb0_A Glycogen [starch] synth 99.8 1.2E-19 4.1E-24 199.0 19.1 299 154-507 30-381 (725)
15 2c4m_A Glycogen phosphorylase; 99.8 4.5E-20 1.6E-24 205.1 12.2 247 290-542 289-614 (796)
16 1l5w_A Maltodextrin phosphoryl 99.8 5.1E-20 1.7E-24 204.7 11.6 248 290-542 299-624 (796)
17 3oy2_A Glycosyltransferase B73 99.8 1.2E-18 4.3E-23 182.8 18.2 127 380-541 129-273 (413)
18 2gj4_A Glycogen phosphorylase, 99.8 2.6E-19 8.7E-24 199.7 9.2 248 290-542 320-648 (824)
19 1f0k_A MURG, UDP-N-acetylgluco 99.7 3.3E-16 1.1E-20 161.2 14.9 246 151-541 6-254 (364)
20 2hy7_A Glucuronosyltransferase 99.6 1.1E-14 3.6E-19 153.9 12.6 112 375-541 171-284 (406)
21 2x0d_A WSAF; GT4 family, trans 99.5 7E-14 2.4E-18 148.1 15.6 257 149-541 44-314 (413)
22 2vsy_A XCC0866; transferase, g 99.5 1.7E-13 5.7E-18 150.0 19.0 240 148-541 202-453 (568)
23 1uqt_A Alpha, alpha-trehalose- 99.4 9.1E-13 3.1E-17 142.2 15.2 198 290-542 123-352 (482)
24 1vgv_A UDP-N-acetylglucosamine 99.4 6.5E-12 2.2E-16 130.0 20.8 187 289-541 85-282 (384)
25 3beo_A UDP-N-acetylglucosamine 99.4 5.6E-12 1.9E-16 129.9 16.8 127 381-541 149-282 (375)
26 1v4v_A UDP-N-acetylglucosamine 99.3 2.5E-11 8.7E-16 125.4 15.1 125 379-541 143-274 (376)
27 3t5t_A Putative glycosyltransf 99.2 4.5E-11 1.5E-15 128.5 12.7 195 290-541 149-371 (496)
28 2bfw_A GLGA glycogen synthase; 99.1 8.7E-10 3E-14 103.4 11.8 105 419-541 1-115 (200)
29 2xci_A KDO-transferase, 3-deox 98.9 5.7E-08 2E-12 101.1 19.4 119 377-541 148-277 (374)
30 3otg_A CALG1; calicheamicin, T 98.6 2.8E-07 9.7E-12 95.9 13.7 67 467-541 242-308 (412)
31 3s2u_A UDP-N-acetylglucosamine 98.4 1.1E-05 3.6E-10 83.6 19.6 71 467-541 179-252 (365)
32 3dzc_A UDP-N-acetylglucosamine 98.4 2.5E-06 8.6E-11 89.4 13.0 134 380-540 164-306 (396)
33 3rhz_A GTF3, nucleotide sugar 98.3 2.7E-06 9.1E-11 87.4 12.2 154 289-539 73-231 (339)
34 2iyf_A OLED, oleandomycin glyc 98.2 2.5E-05 8.4E-10 81.8 16.6 39 151-195 7-45 (430)
35 4fzr_A SSFS6; structural genom 98.2 1.8E-06 6.1E-11 89.8 7.7 41 148-194 12-52 (398)
36 3qhp_A Type 1 capsular polysac 98.2 2.5E-06 8.5E-11 77.1 6.7 70 468-541 2-74 (166)
37 3ia7_A CALG4; glycosysltransfe 98.1 7.9E-05 2.7E-09 76.8 17.0 38 151-194 4-41 (402)
38 3oti_A CALG3; calicheamicin, T 98.1 1.4E-05 4.9E-10 82.9 10.9 66 467-540 232-298 (398)
39 3ot5_A UDP-N-acetylglucosamine 98.1 1.5E-05 5E-10 83.7 11.0 126 381-540 168-300 (403)
40 2f9f_A First mannosyl transfer 98.0 2.3E-05 7.8E-10 72.0 8.9 71 466-541 21-97 (177)
41 3rsc_A CALG2; TDP, enediyne, s 97.9 0.0003 1E-08 73.0 16.7 40 149-194 18-57 (415)
42 4hwg_A UDP-N-acetylglucosamine 97.7 9.3E-05 3.2E-09 77.2 8.9 105 381-516 145-254 (385)
43 3tsa_A SPNG, NDP-rhamnosyltran 97.5 0.00014 4.8E-09 74.9 7.6 38 151-194 1-38 (391)
44 2p6p_A Glycosyl transferase; X 97.4 0.0025 8.7E-08 65.3 15.0 37 152-194 1-37 (384)
45 1ygp_A Yeast glycogen phosphor 96.2 0.02 6.7E-07 64.3 11.3 167 372-542 467-707 (879)
46 3h4t_A Glycosyltransferase GTF 95.6 0.027 9.2E-07 58.4 8.5 37 152-194 1-37 (404)
47 4amg_A Snogd; transferase, pol 90.5 0.21 7.1E-06 50.9 4.8 40 149-194 20-59 (400)
48 2iya_A OLEI, oleandomycin glyc 84.6 0.9 3.1E-05 46.7 5.3 39 150-194 11-49 (424)
49 2yjn_A ERYCIII, glycosyltransf 80.7 1.1 3.9E-05 46.3 4.2 39 150-194 19-57 (441)
50 1rrv_A Glycosyltransferase GTF 80.4 1.5 5.2E-05 44.9 5.1 37 152-194 1-37 (416)
51 1iir_A Glycosyltransferase GTF 78.7 1.9 6.4E-05 44.3 5.1 37 152-194 1-37 (415)
52 4b4o_A Epimerase family protei 74.6 2.7 9.1E-05 40.9 4.7 33 152-194 1-33 (298)
53 3f6r_A Flavodoxin; FMN binding 67.2 6.6 0.00023 33.8 5.1 39 151-194 1-39 (148)
54 2hy5_A Putative sulfurtransfer 66.0 9.7 0.00033 32.4 5.8 40 152-194 1-41 (130)
55 2d1p_A TUSD, hypothetical UPF0 64.5 11 0.00038 32.8 6.0 41 150-193 11-52 (140)
56 3hly_A Flavodoxin-like domain; 63.8 8.1 0.00028 34.2 5.0 38 152-194 1-38 (161)
57 3ty2_A 5'-nucleotidase SURE; s 62.9 7.1 0.00024 37.9 4.7 40 149-196 9-48 (261)
58 1wcv_1 SOJ, segregation protei 61.0 8.1 0.00028 36.7 4.8 41 148-194 2-44 (257)
59 4gi5_A Quinone reductase; prot 59.1 13 0.00043 36.5 5.9 41 149-193 20-61 (280)
60 1psw_A ADP-heptose LPS heptosy 57.9 21 0.00072 35.0 7.5 76 452-531 166-249 (348)
61 3k9g_A PF-32 protein; ssgcid, 57.9 7.1 0.00024 37.2 3.8 42 146-194 21-64 (267)
62 2phj_A 5'-nucleotidase SURE; S 57.4 9.6 0.00033 36.7 4.5 38 151-196 1-38 (251)
63 2pq6_A UDP-glucuronosyl/UDP-gl 56.7 11 0.00037 39.6 5.3 38 151-194 8-45 (482)
64 2ark_A Flavodoxin; FMN, struct 56.6 14 0.00049 33.2 5.5 40 150-194 3-43 (188)
65 2vch_A Hydroquinone glucosyltr 56.1 9 0.00031 40.3 4.6 40 150-195 5-45 (480)
66 1f4p_A Flavodoxin; electron tr 54.3 14 0.00046 31.7 4.7 38 152-194 1-38 (147)
67 3ew7_A LMO0794 protein; Q8Y8U8 53.2 13 0.00045 33.6 4.7 33 152-194 1-33 (221)
68 1kjn_A MTH0777; hypotethical p 52.3 25 0.00084 31.0 5.8 41 148-192 3-43 (157)
69 1ydg_A Trp repressor binding p 52.3 20 0.00069 32.7 5.8 40 150-194 5-44 (211)
70 1jx7_A Hypothetical protein YC 51.7 19 0.00066 29.3 5.1 40 152-194 2-43 (117)
71 2a5l_A Trp repressor binding p 51.4 21 0.00071 32.1 5.7 38 151-193 5-42 (200)
72 3h2s_A Putative NADH-flavin re 51.0 15 0.00051 33.4 4.7 33 152-194 1-33 (224)
73 3b6i_A Flavoprotein WRBA; flav 50.6 19 0.00065 32.3 5.3 39 151-194 1-40 (198)
74 3fni_A Putative diflavin flavo 49.1 27 0.00092 30.7 5.9 39 151-194 4-42 (159)
75 2e6c_A 5'-nucleotidase SURE; S 48.8 16 0.00053 35.1 4.5 37 152-196 1-37 (244)
76 3e8x_A Putative NAD-dependent 48.6 18 0.0006 33.5 4.8 35 150-194 20-54 (236)
77 2hna_A Protein MIOC, flavodoxi 48.4 17 0.00057 31.2 4.3 37 151-192 1-37 (147)
78 1j9j_A Stationary phase surviV 47.5 17 0.00059 34.8 4.5 37 152-196 1-37 (247)
79 3r6d_A NAD-dependent epimerase 47.1 20 0.00069 32.7 5.0 36 150-194 3-39 (221)
80 1ykg_A SIR-FP, sulfite reducta 46.8 12 0.0004 33.2 3.1 40 150-194 8-47 (167)
81 3mc3_A DSRE/DSRF-like family p 46.2 29 0.001 29.6 5.5 42 150-194 14-55 (134)
82 2x4g_A Nucleoside-diphosphate- 45.3 21 0.00071 34.9 5.0 35 150-194 12-46 (342)
83 3mcu_A Dipicolinate synthase, 45.0 22 0.00074 33.2 4.7 35 152-194 6-42 (207)
84 2o6l_A UDP-glucuronosyltransfe 44.8 18 0.00063 31.5 4.1 55 467-534 21-78 (170)
85 1t2a_A GDP-mannose 4,6 dehydra 44.5 19 0.00065 35.9 4.6 25 167-194 33-57 (375)
86 1l5x_A SurviVal protein E; str 44.5 19 0.00067 35.1 4.5 37 152-196 1-37 (280)
87 2ph1_A Nucleotide-binding prot 44.1 22 0.00075 33.7 4.8 40 149-194 15-56 (262)
88 2v4n_A Multifunctional protein 43.9 22 0.00074 34.3 4.6 38 151-196 1-38 (254)
89 2dkn_A 3-alpha-hydroxysteroid 43.9 21 0.00071 33.1 4.6 34 152-194 1-34 (255)
90 1fjh_A 3alpha-hydroxysteroid d 43.2 22 0.00074 33.3 4.6 34 152-194 1-34 (257)
91 3qvo_A NMRA family protein; st 42.9 17 0.0006 33.6 3.8 35 151-194 22-57 (236)
92 3dqp_A Oxidoreductase YLBE; al 42.7 18 0.00062 32.9 3.9 33 152-194 1-33 (219)
93 2zki_A 199AA long hypothetical 41.6 27 0.00094 31.3 4.8 38 151-194 4-41 (199)
94 3d7l_A LIN1944 protein; APC893 41.4 24 0.00082 31.6 4.4 34 150-194 2-35 (202)
95 3lqk_A Dipicolinate synthase s 40.9 23 0.0008 32.8 4.2 37 151-195 7-45 (201)
96 3nbm_A PTS system, lactose-spe 40.9 38 0.0013 28.0 5.1 42 148-195 3-44 (108)
97 3guy_A Short-chain dehydrogena 40.5 21 0.00072 32.9 3.9 34 152-194 1-34 (230)
98 1xv5_A AGT, DNA alpha-glucosyl 40.0 61 0.0021 30.2 6.8 42 151-195 1-42 (401)
99 1lss_A TRK system potassium up 39.7 32 0.0011 28.4 4.7 33 151-194 4-36 (140)
100 2fzv_A Putative arsenical resi 39.0 49 0.0017 32.2 6.4 44 148-194 55-98 (279)
101 2vzf_A NADH-dependent FMN redu 38.3 42 0.0014 30.3 5.6 41 151-194 2-43 (197)
102 3kjh_A CO dehydrogenase/acetyl 37.3 25 0.00085 32.4 3.9 35 152-194 1-37 (254)
103 3l4b_C TRKA K+ channel protien 36.9 31 0.0011 31.6 4.5 24 171-194 9-32 (218)
104 1g3q_A MIND ATPase, cell divis 36.8 42 0.0014 30.8 5.4 37 152-194 2-40 (237)
105 4dzz_A Plasmid partitioning pr 36.5 42 0.0014 29.9 5.2 37 152-194 1-39 (206)
106 3f2v_A General stress protein 36.1 22 0.00074 32.6 3.1 38 151-193 1-38 (192)
107 1hyq_A MIND, cell division inh 36.0 39 0.0013 31.7 5.1 37 152-194 2-40 (263)
108 3orf_A Dihydropteridine reduct 35.4 34 0.0012 32.1 4.6 36 150-194 20-55 (251)
109 1bvy_F Protein (cytochrome P45 35.4 31 0.001 31.5 4.1 39 151-194 21-59 (191)
110 2acv_A Triterpene UDP-glucosyl 35.3 24 0.00084 36.7 3.8 40 150-195 8-49 (463)
111 1hdo_A Biliverdin IX beta redu 35.3 39 0.0013 29.9 4.8 33 152-194 4-36 (206)
112 1xg5_A ARPG836; short chain de 35.2 39 0.0013 32.1 5.0 32 153-193 33-64 (279)
113 2d1p_B TUSC, hypothetical UPF0 35.1 49 0.0017 27.5 5.0 39 153-194 3-41 (119)
114 1jay_A Coenzyme F420H2:NADP+ o 34.5 35 0.0012 30.9 4.4 33 152-194 1-33 (212)
115 3ic5_A Putative saccharopine d 34.4 46 0.0016 26.5 4.7 33 151-194 5-38 (118)
116 1rpn_A GDP-mannose 4,6-dehydra 34.2 37 0.0013 32.9 4.8 36 149-194 12-47 (335)
117 2hy5_B Intracellular sulfur ox 34.1 42 0.0014 28.8 4.5 41 151-194 4-45 (136)
118 3rp8_A Flavoprotein monooxygen 34.1 35 0.0012 34.4 4.7 44 139-193 11-54 (407)
119 1f0y_A HCDH, L-3-hydroxyacyl-C 33.2 43 0.0015 32.4 5.0 40 144-194 8-47 (302)
120 3l77_A Short-chain alcohol deh 33.1 37 0.0013 31.2 4.3 34 152-194 2-35 (235)
121 4hb9_A Similarities with proba 33.1 27 0.00093 34.7 3.6 30 151-191 1-30 (412)
122 2qyt_A 2-dehydropantoate 2-red 32.9 31 0.0011 33.4 3.9 37 146-193 3-45 (317)
123 1t5b_A Acyl carrier protein ph 32.7 49 0.0017 29.5 5.0 42 151-194 1-44 (201)
124 3rpe_A MDAB, modulator of drug 32.5 52 0.0018 30.8 5.2 46 148-195 22-70 (218)
125 3oh8_A Nucleoside-diphosphate 32.3 40 0.0014 35.6 4.9 34 151-194 147-180 (516)
126 1d4a_A DT-diaphorase, quinone 32.3 61 0.0021 31.1 5.9 40 151-194 2-42 (273)
127 1sqs_A Conserved hypothetical 31.9 51 0.0017 30.8 5.2 41 151-194 1-42 (242)
128 1sbz_A Probable aromatic acid 31.8 49 0.0017 30.4 4.8 36 152-194 1-37 (197)
129 3r6w_A FMN-dependent NADH-azor 31.7 46 0.0016 30.4 4.7 42 151-194 1-44 (212)
130 3hbm_A UDP-sugar hydrolase; PS 31.7 72 0.0025 30.9 6.3 67 469-541 159-225 (282)
131 3tem_A Ribosyldihydronicotinam 31.7 51 0.0018 30.8 5.1 40 151-194 1-41 (228)
132 3ko8_A NAD-dependent epimerase 31.3 39 0.0013 32.4 4.3 33 152-194 1-33 (312)
133 1gsa_A Glutathione synthetase; 30.7 37 0.0013 32.5 4.1 40 152-194 2-41 (316)
134 3q9l_A Septum site-determining 30.7 59 0.002 30.1 5.4 38 151-194 1-40 (260)
135 1sny_A Sniffer CG10964-PA; alp 30.7 33 0.0011 32.1 3.6 37 149-194 18-57 (267)
136 1zmt_A Haloalcohol dehalogenas 30.1 24 0.00083 33.1 2.5 33 152-193 1-33 (254)
137 3zqu_A Probable aromatic acid 30.0 66 0.0023 29.9 5.4 37 151-194 4-40 (209)
138 2g1u_A Hypothetical protein TM 29.8 66 0.0023 27.5 5.2 34 150-194 18-51 (155)
139 4id9_A Short-chain dehydrogena 29.8 36 0.0012 33.2 3.9 36 149-194 17-52 (347)
140 2b69_A UDP-glucuronate decarbo 29.7 45 0.0015 32.6 4.5 35 150-194 26-60 (343)
141 1vl8_A Gluconate 5-dehydrogena 29.7 52 0.0018 31.2 4.8 34 152-194 21-54 (267)
142 2ew2_A 2-dehydropantoate 2-red 29.6 46 0.0016 31.9 4.5 32 151-193 3-34 (316)
143 3i4f_A 3-oxoacyl-[acyl-carrier 29.5 44 0.0015 31.3 4.2 35 151-194 6-40 (264)
144 2pk3_A GDP-6-deoxy-D-LYXO-4-he 29.4 46 0.0016 32.0 4.5 25 167-194 21-45 (321)
145 1uan_A Hypothetical protein TT 29.4 84 0.0029 29.3 6.1 40 151-196 1-40 (227)
146 2q62_A ARSH; alpha/beta, flavo 29.2 1.3E+02 0.0044 28.5 7.5 41 150-193 33-73 (247)
147 2hpv_A FMN-dependent NADH-azor 29.2 64 0.0022 29.1 5.2 41 151-193 1-44 (208)
148 3ruf_A WBGU; rossmann fold, UD 28.9 53 0.0018 32.1 4.9 35 150-194 24-58 (351)
149 2r85_A PURP protein PF1517; AT 28.9 35 0.0012 33.2 3.5 32 151-194 2-33 (334)
150 3bfv_A CAPA1, CAPB2, membrane 28.7 70 0.0024 30.6 5.6 42 149-194 79-120 (271)
151 3opy_A 6-phosphofructo-1-kinas 28.5 79 0.0027 36.2 6.5 87 101-192 160-247 (989)
152 1n7h_A GDP-D-mannose-4,6-dehyd 28.5 49 0.0017 32.9 4.6 25 167-194 37-61 (381)
153 1orr_A CDP-tyvelose-2-epimeras 28.5 48 0.0016 32.1 4.5 24 167-193 10-33 (347)
154 2c20_A UDP-glucose 4-epimerase 28.3 49 0.0017 31.9 4.5 24 168-194 11-34 (330)
155 2gk4_A Conserved hypothetical 28.2 51 0.0017 31.2 4.3 25 167-194 28-52 (232)
156 3igf_A ALL4481 protein; two-do 27.8 65 0.0022 32.7 5.4 36 151-193 1-38 (374)
157 3m2p_A UDP-N-acetylglucosamine 27.6 53 0.0018 31.5 4.6 27 168-194 9-35 (311)
158 2rh8_A Anthocyanidin reductase 27.5 52 0.0018 31.9 4.5 24 167-193 18-41 (338)
159 3ph3_A Ribose-5-phosphate isom 27.4 67 0.0023 28.8 4.7 39 147-193 16-54 (169)
160 3gpi_A NAD-dependent epimerase 27.4 55 0.0019 30.9 4.6 33 151-194 3-35 (286)
161 2fb6_A Conserved hypothetical 27.1 43 0.0015 28.0 3.2 38 152-193 8-47 (117)
162 3dhn_A NAD-dependent epimerase 26.8 48 0.0017 30.0 3.9 34 151-194 4-37 (227)
163 3qjg_A Epidermin biosynthesis 26.6 62 0.0021 29.2 4.4 36 152-194 6-41 (175)
164 3pg5_A Uncharacterized protein 26.5 57 0.002 32.6 4.7 37 152-194 1-39 (361)
165 1lld_A L-lactate dehydrogenase 26.4 61 0.0021 31.5 4.8 35 149-194 5-41 (319)
166 2wqk_A 5'-nucleotidase SURE; S 26.2 61 0.0021 31.0 4.5 36 152-195 2-37 (251)
167 1iow_A DD-ligase, DDLB, D-ALA\ 25.6 48 0.0017 31.7 3.8 39 151-194 2-43 (306)
168 3i83_A 2-dehydropantoate 2-red 25.5 57 0.002 31.9 4.4 33 151-194 2-34 (320)
169 3end_A Light-independent proto 25.5 79 0.0027 30.4 5.4 38 150-194 39-78 (307)
170 3l6e_A Oxidoreductase, short-c 25.5 65 0.0022 29.8 4.6 34 152-194 3-36 (235)
171 1vl0_A DTDP-4-dehydrorhamnose 25.3 42 0.0014 31.8 3.3 36 149-194 10-45 (292)
172 4g65_A TRK system potassium up 25.3 26 0.00089 36.7 1.9 33 150-193 2-34 (461)
173 3vps_A TUNA, NAD-dependent epi 25.3 51 0.0018 31.5 4.0 34 151-194 7-40 (321)
174 2cfc_A 2-(R)-hydroxypropyl-COM 25.3 67 0.0023 29.6 4.6 33 153-194 3-35 (250)
175 2ejb_A Probable aromatic acid 25.2 94 0.0032 28.2 5.5 35 152-194 2-37 (189)
176 3dff_A Teicoplanin pseudoaglyc 25.1 1E+02 0.0034 29.7 6.0 40 151-196 7-46 (273)
177 2x5n_A SPRPN10, 26S proteasome 25.1 1.7E+02 0.0057 26.4 7.2 50 469-521 108-159 (192)
178 1ks9_A KPA reductase;, 2-dehyd 25.1 64 0.0022 30.5 4.6 32 152-194 1-32 (291)
179 3dfi_A Pseudoaglycone deacetyl 24.9 1.1E+02 0.0039 29.2 6.3 40 151-196 7-46 (270)
180 3p0r_A Azoreductase; structura 24.8 85 0.0029 28.7 5.2 42 151-194 4-48 (211)
181 3fwz_A Inner membrane protein 24.7 44 0.0015 28.2 3.0 33 151-194 7-39 (140)
182 1cp2_A CP2, nitrogenase iron p 24.6 71 0.0024 29.9 4.8 36 152-194 1-38 (269)
183 2ph3_A 3-oxoacyl-[acyl carrier 24.6 49 0.0017 30.4 3.5 32 152-192 1-32 (245)
184 1db3_A GDP-mannose 4,6-dehydra 24.6 56 0.0019 32.1 4.2 25 167-194 10-34 (372)
185 3sju_A Keto reductase; short-c 24.5 67 0.0023 30.6 4.6 33 152-193 24-56 (279)
186 1kjq_A GART 2, phosphoribosylg 24.5 73 0.0025 31.8 5.1 37 147-194 7-43 (391)
187 2p5y_A UDP-glucose 4-epimerase 24.4 58 0.002 31.2 4.1 32 152-193 1-32 (311)
188 1js1_X Transcarbamylase; alpha 24.3 76 0.0026 31.6 5.0 41 151-195 166-206 (324)
189 3fgn_A Dethiobiotin synthetase 24.3 1.1E+02 0.0038 29.0 6.0 43 148-194 22-64 (251)
190 2afh_E Nitrogenase iron protei 24.3 81 0.0028 30.0 5.2 36 152-194 2-39 (289)
191 3gk3_A Acetoacetyl-COA reducta 24.3 57 0.0019 30.8 4.0 33 152-193 25-57 (269)
192 1id1_A Putative potassium chan 24.2 46 0.0016 28.5 3.0 24 171-194 12-35 (153)
193 3tov_A Glycosyl transferase fa 24.0 1.5E+02 0.005 29.3 7.2 72 455-530 174-248 (349)
194 3dfu_A Uncharacterized protein 24.0 59 0.002 30.7 3.9 33 150-193 5-37 (232)
195 2q1w_A Putative nucleotide sug 24.0 68 0.0023 31.2 4.6 34 151-194 21-54 (333)
196 2r6j_A Eugenol synthase 1; phe 23.9 50 0.0017 31.8 3.6 25 167-194 20-44 (318)
197 1mvl_A PPC decarboxylase athal 23.9 76 0.0026 29.4 4.6 35 151-194 19-54 (209)
198 1udb_A Epimerase, UDP-galactos 23.8 70 0.0024 30.9 4.7 32 152-193 1-32 (338)
199 1tvm_A PTS system, galactitol- 23.8 1.6E+02 0.0055 24.0 6.2 41 149-194 19-59 (113)
200 3ea0_A ATPase, para family; al 23.8 69 0.0024 29.3 4.4 39 150-194 2-43 (245)
201 2pzm_A Putative nucleotide sug 23.7 64 0.0022 31.3 4.4 34 151-194 20-53 (330)
202 2rhc_B Actinorhodin polyketide 23.5 88 0.003 29.6 5.2 32 153-193 23-54 (277)
203 3r5x_A D-alanine--D-alanine li 23.4 54 0.0018 31.5 3.7 43 150-194 2-44 (307)
204 1i24_A Sulfolipid biosynthesis 23.4 65 0.0022 32.0 4.4 34 150-193 10-43 (404)
205 3grp_A 3-oxoacyl-(acyl carrier 23.3 75 0.0026 30.0 4.7 33 152-193 27-59 (266)
206 3m1a_A Putative dehydrogenase; 23.2 66 0.0022 30.4 4.2 34 152-194 5-38 (281)
207 1t0i_A YLR011WP; FMN binding p 23.2 1E+02 0.0036 27.2 5.4 39 152-193 1-45 (191)
208 1ooe_A Dihydropteridine reduct 23.1 75 0.0026 29.1 4.5 33 153-194 4-36 (236)
209 2ehd_A Oxidoreductase, oxidore 22.8 74 0.0025 29.0 4.4 24 167-193 14-37 (234)
210 3rkr_A Short chain oxidoreduct 22.8 76 0.0026 29.7 4.6 33 153-194 30-62 (262)
211 3ego_A Probable 2-dehydropanto 22.8 73 0.0025 31.0 4.6 32 151-194 2-33 (307)
212 5nul_A Flavodoxin; electron tr 22.7 69 0.0024 26.7 3.8 29 166-194 8-36 (138)
213 3cio_A ETK, tyrosine-protein k 22.6 95 0.0033 30.1 5.3 42 149-194 101-142 (299)
214 2l2q_A PTS system, cellobiose- 22.6 1.1E+02 0.0038 24.8 5.0 39 151-195 4-42 (109)
215 3k96_A Glycerol-3-phosphate de 22.5 63 0.0021 32.4 4.1 35 149-194 27-61 (356)
216 3n7t_A Macrophage binding prot 22.3 1.3E+02 0.0043 28.6 6.0 44 151-194 9-57 (247)
217 3hn2_A 2-dehydropantoate 2-red 22.1 61 0.0021 31.5 3.8 33 151-194 2-34 (312)
218 3slg_A PBGP3 protein; structur 22.0 57 0.002 32.1 3.6 34 151-194 24-58 (372)
219 1p9o_A Phosphopantothenoylcyst 22.0 69 0.0024 31.7 4.1 24 171-194 65-88 (313)
220 3f9i_A 3-oxoacyl-[acyl-carrier 21.8 81 0.0028 29.1 4.5 33 153-194 15-47 (249)
221 3rft_A Uronate dehydrogenase; 21.8 46 0.0016 31.3 2.8 34 152-194 3-36 (267)
222 3dii_A Short-chain dehydrogena 21.7 84 0.0029 29.1 4.6 32 153-193 3-34 (247)
223 2r8r_A Sensor protein; KDPD, P 21.7 90 0.0031 29.4 4.7 38 149-194 4-43 (228)
224 3eag_A UDP-N-acetylmuramate:L- 21.6 86 0.0029 30.8 4.8 33 150-192 3-35 (326)
225 1rkx_A CDP-glucose-4,6-dehydra 21.5 86 0.003 30.6 4.9 34 151-194 9-42 (357)
226 3i6i_A Putative leucoanthocyan 21.5 73 0.0025 31.1 4.3 34 151-194 10-43 (346)
227 3of5_A Dethiobiotin synthetase 21.4 1.1E+02 0.0038 28.4 5.3 39 151-193 3-41 (228)
228 1ek6_A UDP-galactose 4-epimera 21.2 75 0.0026 30.8 4.3 24 167-193 11-34 (348)
229 3ezl_A Acetoacetyl-COA reducta 21.2 74 0.0025 29.5 4.1 34 151-193 12-45 (256)
230 1qyd_A Pinoresinol-lariciresin 20.9 58 0.002 31.1 3.3 34 151-194 4-37 (313)
231 2xj4_A MIPZ; replication, cell 20.8 1.1E+02 0.0037 29.2 5.3 38 151-194 3-42 (286)
232 3qxc_A Dethiobiotin synthetase 20.7 1.1E+02 0.0039 28.7 5.3 41 149-193 18-58 (242)
233 3g0o_A 3-hydroxyisobutyrate de 20.7 88 0.003 30.2 4.6 33 150-193 6-38 (303)
234 3g17_A Similar to 2-dehydropan 20.7 53 0.0018 31.7 3.0 33 151-194 2-34 (294)
235 3nrc_A Enoyl-[acyl-carrier-pro 20.6 78 0.0027 30.0 4.2 35 153-194 27-61 (280)
236 1g63_A Epidermin modifying enz 20.6 77 0.0026 28.6 3.8 35 153-194 4-38 (181)
237 3e48_A Putative nucleoside-dip 20.5 75 0.0026 30.0 4.0 33 152-194 1-34 (289)
238 3llv_A Exopolyphosphatase-rela 20.4 55 0.0019 27.3 2.7 22 173-194 17-38 (141)
239 1dhr_A Dihydropteridine reduct 20.4 86 0.003 28.8 4.3 33 153-194 8-40 (241)
240 1bg6_A N-(1-D-carboxylethyl)-L 20.3 91 0.0031 30.5 4.7 32 151-193 4-35 (359)
241 1uay_A Type II 3-hydroxyacyl-C 20.3 75 0.0026 28.9 3.9 25 167-194 11-35 (242)
242 3la6_A Tyrosine-protein kinase 20.3 1E+02 0.0035 29.7 5.0 41 150-194 90-130 (286)
243 3pxx_A Carveol dehydrogenase; 20.3 1E+02 0.0035 29.0 4.9 33 153-194 11-43 (287)
244 2c5a_A GDP-mannose-3', 5'-epim 20.2 1.2E+02 0.004 30.1 5.6 35 150-194 28-62 (379)
245 1wma_A Carbonyl reductase [NAD 20.2 83 0.0028 29.1 4.2 34 152-194 4-38 (276)
246 3ius_A Uncharacterized conserv 20.1 69 0.0023 30.1 3.6 22 173-194 16-37 (286)
247 2ekp_A 2-deoxy-D-gluconate 3-d 20.1 95 0.0033 28.5 4.6 33 153-194 3-35 (239)
248 1qzu_A Hypothetical protein MD 20.0 91 0.0031 28.8 4.3 38 150-194 18-56 (206)
249 4egb_A DTDP-glucose 4,6-dehydr 20.0 71 0.0024 31.0 3.8 34 150-193 23-56 (346)
250 1u7z_A Coenzyme A biosynthesis 20.0 81 0.0028 29.6 4.0 24 167-193 33-56 (226)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=1.1e-47 Score=421.34 Aligned_cols=383 Identities=42% Similarity=0.697 Sum_probs=295.8
Q ss_pred cCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeE
Q 009139 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (542)
Q Consensus 147 ~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 226 (542)
..+..|||+||++|++|+.++||+++++..|+++|+++||+|.||+|.|+.... ..+......+...++...+
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~-------~~~~~~~~~~~~~~~~~~~ 77 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKD-------AWDTSVVAEIKVADRYERV 77 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTT-------CEEEEEEEEEEETTEEEEE
T ss_pred cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhh-------hcccceEEEEEecCceEEE
Confidence 345689999999999999999999999999999999999999999999965321 1222223445555666777
Q ss_pred EEEEeeeCCeEEEEEcCCCCCCC------CCCCCCCC-CCCCChHHHHHHHHHHHHHhccccCCC-----CCCCCCccEE
Q 009139 227 AFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLG-----GFTYGEKCIF 294 (542)
Q Consensus 227 ~~~~~~~~gv~v~~i~~p~~~~~------~~~y~~~~-~~~~~~~~r~~~~~~a~~~~~~~l~~~-----~f~~~~pDII 294 (542)
++++...+|+++|++++|.|+.+ ..+|++.. .+|.|+..||.+|+++++++.+.+... ......+||+
T Consensus 78 ~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi 157 (536)
T 3vue_A 78 RFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF 157 (536)
T ss_dssp EEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred EEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence 88888889999999999987654 34676433 368999999999999988876544210 0112467899
Q ss_pred EECCCchhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHH
Q 009139 295 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 374 (542)
Q Consensus 295 H~H~~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 374 (542)
|+|+|+++++|.+++..+...+.+.++|+|+|+||+.++|.++...+..++++..++....+.. ..........++
T Consensus 158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n 233 (536)
T 3vue_A 158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFID----GYDTPVEGRKIN 233 (536)
T ss_dssp EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEE----TTTSTTCEEEEE
T ss_pred EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhh----cccccccccchh
Confidence 9999999999999987776555667899999999999999988777766776654432211100 001112234567
Q ss_pred HHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccc-cchhHHHH
Q 009139 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQCK 453 (542)
Q Consensus 375 ~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d-~~~k~~~k 453 (542)
+++.++..||.|+|||+.+++++.+.. ++|+......+..++.+|+||||++.|+|.++..++.+++..+ ..+|..+|
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence 899999999999999999999987642 3333222223567999999999999999999988888777654 56889999
Q ss_pred HHHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCCh
Q 009139 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (542)
Q Consensus 454 ~~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~ 533 (542)
..+++++|++.+++.|+|+||||++++||++.|++|++++.+.+++|+|+|.|+..+...++.++..+++++.+..++++
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 99999999998889999999999999999999999999998889999999999988888999999999999988888888
Q ss_pred hhhhhhhc
Q 009139 534 PISHRITA 541 (542)
Q Consensus 534 ~l~~~~~A 541 (542)
+..+.+++
T Consensus 393 ~~~~~~~~ 400 (536)
T 3vue_A 393 PLAHLIMA 400 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777665
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=3.3e-33 Score=300.94 Aligned_cols=362 Identities=31% Similarity=0.457 Sum_probs=245.5
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 231 (542)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+|+.++... ..+.. ......+.+. .|. ...+.+.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~~-~~~~~~~~~~-~~~--~~~~~~~ 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVK---AAVTD-PVKCFEFTDL-LGE--KADLLEV 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHH---HHCCS-CEEEEEESCS-SSC--CEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccccc---ccccc-cceeEEEEEe-cCC--eEEEEEE
Confidence 899999999999645799999999999999999999999998652210 00000 0000000000 000 1122233
Q ss_pred eeCCeEEEEEcCCCCCCCC-CCCCCC-CCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHHH
Q 009139 232 YREGVDWVFVDHPSYHRPG-NPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (542)
Q Consensus 232 ~~~gv~v~~i~~p~~~~~~-~~y~~~-~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l~ 309 (542)
..+|+++++++.+.+..+. .+|+.. ...|.++..++..+..++.++.+.+- +..+|||||+|+|.+++++.+++
T Consensus 74 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~DiIh~~~~~~~~~~~~~~ 149 (485)
T 1rzu_A 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL----PGWRPDMVHAHDWQAAMTPVYMR 149 (485)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS----SSCCCSEEEEEHHHHTTHHHHHH
T ss_pred EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhc----cCCCCCEEEecccchhHHHHHHh
Confidence 4589999988654322111 133210 12345666676666666665554330 13489999999988777776655
Q ss_pred HhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCceeec
Q 009139 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (542)
Q Consensus 310 ~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~v 389 (542)
... ..++|+|+|+|+..+.+.++...+..++++..++..... .++....+++.+++.+|.|+++
T Consensus 150 ~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vi~~ 213 (485)
T 1rzu_A 150 YAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGI-----------EYYNDVSFLKGGLQTATALSTV 213 (485)
T ss_dssp HSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTT-----------EETTEEEHHHHHHHHCSEEEES
T ss_pred hcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccc-----------cccccccHHHHHHhhcCEEEec
Confidence 421 147999999999865554443333333444332211000 0000112567788999999999
Q ss_pred ChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 009139 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (542)
Q Consensus 390 S~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~ 469 (542)
|+.+++.+....+|+|+...+..+..++.+||||||.+.|.|..+..++.+++.+++.++..++..+++++|++. ++.+
T Consensus 214 S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~ 292 (485)
T 1rzu_A 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-DGSP 292 (485)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC-SSSC
T ss_pred CHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCC-CCCe
Confidence 999998876432233444444456789999999999999988766556667777777788888999999999973 2367
Q ss_pred EEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChhh-hhhhhc
Q 009139 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI-SHRITA 541 (542)
Q Consensus 470 vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l-~~~~~A 541 (542)
+|+|+||+.++||++.|++|++.+.+.+++|+|+|+|+..+.+.+++++++++++|+++.||.++. ..++.+
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHH
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhc
Confidence 999999999999999999999999777999999999987688999999999888887789997766 455543
No 3
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=5.5e-33 Score=299.16 Aligned_cols=360 Identities=31% Similarity=0.508 Sum_probs=241.3
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 231 (542)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+|+.++... ..+.. .. ........++ ...+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~~-~~--~~~~~~~~~~--~~~~~~~ 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR---RGVTD-AQ--VVSRRDTFAG--HITLLFG 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHH---HHCTT-CE--EEEEECCTTC--CEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccc---ccccc-ce--eEEEecccCC--cEEEEEE
Confidence 899999999999655799999999999999999999999998642110 00000 00 0000000000 0112223
Q ss_pred eeCCeEEEEEcCCCCCCCCC-CCCCCC-CCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHHH
Q 009139 232 YREGVDWVFVDHPSYHRPGN-PYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (542)
Q Consensus 232 ~~~gv~v~~i~~p~~~~~~~-~y~~~~-~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l~ 309 (542)
..+|+++++++.+.+..+.. +|+... ..|.++..++..+..++.++++.+. +..+|||||+|+|.+++++.+++
T Consensus 73 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Divh~~~~~~~~~~~~~~ 148 (485)
T 2qzs_A 73 HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLD----PFWRPDVVHAHDWHAGLAPAYLA 148 (485)
T ss_dssp EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSS----TTCCCSEEEEETGGGTTHHHHHH
T ss_pred EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhc----cCCCCCEEEeeccchhHHHHHHh
Confidence 35899999886543222111 332100 1245666666666666665554331 01489999999988877776655
Q ss_pred HhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCceeec
Q 009139 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (542)
Q Consensus 310 ~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~v 389 (542)
.. ..++|+|+|+|+..+.+.++...+..++++..++..... .+.....+++..++.+|.|+++
T Consensus 149 ~~------~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vi~~ 211 (485)
T 2qzs_A 149 AR------GRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGL-----------EFNGQISFLKAGLYYADHITAV 211 (485)
T ss_dssp HT------TCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTT-----------EETTEEEHHHHHHHHCSEEEES
T ss_pred hc------cCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccc-----------cccccccHHHHHHHhcCeEEec
Confidence 21 157999999999865444433223333333322211000 0001113567778899999999
Q ss_pred ChhhHHHHHhhccCCchhhhhhcCC--ccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCC
Q 009139 390 SKGYSWEITTVEGGYGLHEILSSRK--SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (542)
Q Consensus 390 S~~~~~~l~~~~~g~Gl~~~l~~~~--~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~ 467 (542)
|+.+++.+.....|.+++..+..+. .++.+||||||.+.|.|..+..+..+|+.+++.++...+..+++++|++.+++
T Consensus 212 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 291 (485)
T 2qzs_A 212 SPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDK 291 (485)
T ss_dssp SHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTT
T ss_pred CHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCC
Confidence 9999888754212222222222223 78999999999999988766656667777778888888999999999974347
Q ss_pred CCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChhh-hhhhh
Q 009139 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI-SHRIT 540 (542)
Q Consensus 468 ~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l-~~~~~ 540 (542)
.++|+|+||+.++||++.|++|++.+.+.+++|+|+|+|+..+.+.+++++++++++++++.|+..+. ..++.
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMG 365 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHH
Confidence 79999999999999999999999999777999999999986678999999999888887799997665 45554
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.97 E-value=2.5e-29 Score=264.96 Aligned_cols=322 Identities=22% Similarity=0.311 Sum_probs=225.4
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEE
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 229 (542)
++|||++|+.+++| ...||+++++.+|+++|+++||+|+|+++.++..... .. ..+.+ ++....+.++
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--~~-------~~~~~--~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE--EI-------GKIRV--FGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCE--EE-------EEEEE--TTEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhh--hh-------ccccc--cCcccceeee
Confidence 47999999999988 4679999999999999999999999999886543210 00 01111 2223344455
Q ss_pred EeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCCh-HHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHH
Q 009139 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (542)
Q Consensus 230 ~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~-~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l 308 (542)
....+|+++++++. .+..+..+|.. +.++ ..++..+...+.++++.+-. +..+|||||+|++..++++.++
T Consensus 69 ~~~~~gv~v~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Dii~~~~~~~~~~~~~~ 140 (439)
T 3fro_A 69 YEERGNLRIYRIGG-GLLDSEDVYGP----GWDGLIRKAVTFGRASVLLLNDLLR---EEPLPDVVHFHDWHTVFAGALI 140 (439)
T ss_dssp EEEETTEEEEEEES-GGGGCSSTTCS----HHHHHHHHHHHHHHHHHHHHHHHTT---TSCCCSEEEEESGGGHHHHHHH
T ss_pred eccCCCceEEEecc-hhccccccccC----CcchhhhhhHHHHHHHHHHHHHHhc---cCCCCeEEEecchhhhhhHHHH
Confidence 55779999999976 33333334431 3344 45555666666655544310 1248999999999888877776
Q ss_pred HHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCceee
Q 009139 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (542)
Q Consensus 309 ~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~ 388 (542)
+.. .++|+|+|+|+....+. +........+.. . . ......+++..++.+|.|++
T Consensus 141 ~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~~~-~-~----------------~~~~~~~~~~~~~~ad~ii~ 194 (439)
T 3fro_A 141 KKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGLSE-L-A----------------PYPDIDPEHTGGYIADIVTT 194 (439)
T ss_dssp HHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTCGG-G-C----------------CSSEECHHHHHHHHCSEEEE
T ss_pred hhc-------cCCCEEEEecccccccC-chHHhCcccccc-c-c----------------ccceeeHhhhhhhhccEEEe
Confidence 643 47999999999843221 111110000000 0 0 00011356778899999999
Q ss_pred cChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 009139 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (542)
Q Consensus 389 vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~ 468 (542)
+|+.+++.... .+.....++.+||||+|.+.|.|...+ ..+...+..+++++|++ ++
T Consensus 195 ~S~~~~~~~~~---------~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~- 251 (439)
T 3fro_A 195 VSRGYLIDEWG---------FFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD--EG- 251 (439)
T ss_dssp SCHHHHHHTHH---------HHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCC--SC-
T ss_pred cCHHHHHHHhh---------hhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCC--CC-
Confidence 99998877321 222457899999999999999775210 02345788899999996 34
Q ss_pred CEEEEEccCc-cccCHHHHHHHHHhhhc----CCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccC--Chhhhhhhhc
Q 009139 469 PLIGFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPISHRITA 541 (542)
Q Consensus 469 ~vIlfVGRl~-~~KGid~LieA~~~L~~----~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy--~~~l~~~~~A 541 (542)
++|+|+||+. ++||++.|++|++.+.+ .+++|+|+|+|+..+.+.+++++++++ +++.+.|+ ++++..++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHH
Confidence 9999999999 99999999999999976 589999999999877899999999998 77789994 5567777654
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.93 E-value=8.4e-24 Score=223.86 Aligned_cols=292 Identities=13% Similarity=0.160 Sum_probs=187.0
Q ss_pred cCCCceEEEEEecccCCCc-----CCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecC
Q 009139 147 QTRVSYNIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFG 221 (542)
Q Consensus 147 ~~~~~MkIl~Vt~e~~P~~-----~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g 221 (542)
....+|||++++.+|+|.. ..||+++++.+|+++|+++||+|+|+++....... .
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~------~-------------- 75 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG------E-------------- 75 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC------S--------------
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc------c--------------
Confidence 3457899999999988842 36999999999999999999999999976421100 0
Q ss_pred CceeEEEEEeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-ccccCCCCCCCCCccEEEECCCc
Q 009139 222 GEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWH 300 (542)
Q Consensus 222 ~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~-~~~l~~~~f~~~~pDIIH~H~~~ 300 (542)
.....++++++.++...+.. ... ..+ ...+..+...+.+. ++.. .+|||||+|.+.
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~----~~~--~~~---~~~~~~~~~~~~~~~~~~~-------~~~Div~~~~~~ 132 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEG----LSK--EEL---PTQLAAFTGGMLSFTRREK-------VTYDLIHSHYWL 132 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSS----CCG--GGG---GGGHHHHHHHHHHHHHHHT-------CCCSEEEEEHHH
T ss_pred -------cccccCCeEEEEecCCCccc----cch--hHH---HHHHHHHHHHHHHHHHhcc-------CCCCEEEeCCcc
Confidence 01234788888875432211 000 000 01111222222222 2111 249999999876
Q ss_pred hhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHH
Q 009139 301 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAI 380 (542)
Q Consensus 301 ~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l 380 (542)
.++++.+++.. .++|+|+|+|+...... ..+... .... ......+++..+
T Consensus 133 ~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~------~~~~~~-~~~~----------------~~~~~~~~~~~~ 182 (438)
T 3c48_A 133 SGQVGWLLRDL-------WRIPLIHTAHTLAAVKN------SYRDDS-DTPE----------------SEARRICEQQLV 182 (438)
T ss_dssp HHHHHHHHHHH-------HTCCEEEECSSCHHHHS------CC-----CCHH----------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------cCCCEEEEecCCccccc------cccccc-CCcc----------------hHHHHHHHHHHH
Confidence 66665554443 37899999998621000 000000 0000 001123556778
Q ss_pred HhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHh
Q 009139 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (542)
Q Consensus 381 ~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~l 460 (542)
+.+|.|+++|+..++.+.... ..+..++.+||||+|.+.|.+... ..+..+++++
T Consensus 183 ~~~d~ii~~s~~~~~~~~~~~---------g~~~~k~~vi~ngvd~~~~~~~~~----------------~~~~~~r~~~ 237 (438)
T 3c48_A 183 DNADVLAVNTQEEMQDLMHHY---------DADPDRISVVSPGADVELYSPGND----------------RATERSRREL 237 (438)
T ss_dssp HHCSEEEESSHHHHHHHHHHH---------CCCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHT
T ss_pred hcCCEEEEcCHHHHHHHHHHh---------CCChhheEEecCCccccccCCccc----------------chhhhhHHhc
Confidence 899999999999988876421 134678999999999988876532 1234578899
Q ss_pred CCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcC----CcEEEEEec----CchhhHHHHHHHHHHcC--CCEEEEcc
Q 009139 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD----DIQFVMLGS----GDPQFESWMRDTEATYK--DKYRGWVG 530 (542)
Q Consensus 461 Gl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~----dv~LVIvG~----G~~~~~~~l~~la~~~~--~~v~~~~G 530 (542)
|++ ++.++|+|+||+.++||++.|++|++.+.+. +++|+|+|+ |+ +.+.+++++++++ ++| .|+|
T Consensus 238 ~~~--~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~~~v-~~~g 312 (438)
T 3c48_A 238 GIP--LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVEKRI-RFLD 312 (438)
T ss_dssp TCC--SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCTTTE-EEEC
T ss_pred CCC--CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCCCcE-EEcC
Confidence 985 4778999999999999999999999998752 799999998 54 5678888888764 566 5889
Q ss_pred CC--hhhhhhhhc
Q 009139 531 FN--VPISHRITA 541 (542)
Q Consensus 531 y~--~~l~~~~~A 541 (542)
+. +++..++.+
T Consensus 313 ~~~~~~~~~~~~~ 325 (438)
T 3c48_A 313 PRPPSELVAVYRA 325 (438)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHh
Confidence 96 677777654
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.91 E-value=9e-23 Score=220.50 Aligned_cols=305 Identities=13% Similarity=0.044 Sum_probs=192.6
Q ss_pred CceEEEEEecccCCCc---------CCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeec
Q 009139 150 VSYNIVFVTAEAAPYS---------KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF 220 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~---------~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (542)
.+|||++|+..++|.. ..||+++++.+|+++|+++||+|+|+|+....... ..|...
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~~------------ 71 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENW--PEFSGE------------ 71 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTB--GGGCCS------------
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccc--cchhhh------------
Confidence 3699999999888731 46999999999999999999999999976422100 011100
Q ss_pred CCceeEEEEEee--eCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECC
Q 009139 221 GGEQEIAFFHEY--REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVND 298 (542)
Q Consensus 221 g~~~~~~~~~~~--~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~ 298 (542)
.... .+|+++++++...... ... ..+ ...+..+...+.++++.. ..+|||||+|.
T Consensus 72 --------~~~~~~~~gv~v~~~~~~~~~~----~~~--~~~---~~~~~~~~~~l~~~l~~~------~~~~Divh~~~ 128 (499)
T 2r60_A 72 --------IDYYQETNKVRIVRIPFGGDKF----LPK--EEL---WPYLHEYVNKIINFYREE------GKFPQVVTTHY 128 (499)
T ss_dssp --------EEECTTCSSEEEEEECCSCSSC----CCG--GGC---GGGHHHHHHHHHHHHHHH------TCCCSEEEEEH
T ss_pred --------HHhccCCCCeEEEEecCCCcCC----cCH--HHH---HHHHHHHHHHHHHHHHhc------CCCCCEEEEcC
Confidence 0111 3688888885432100 000 000 001111222233333221 12799999998
Q ss_pred CchhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhc---CCChhhhcccccccccccccccccchhHHHH
Q 009139 299 WHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNL---GLPSEWYGALEWVFPTWARTHALDTGEAVNV 375 (542)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~l---gl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (542)
+..++++.+++.. .++|+|+|+|+.... ..... +.....+.. ...+.....+
T Consensus 129 ~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 183 (499)
T 2r60_A 129 GDGGLAGVLLKNI-------KGLPFTFTGHSLGAQ------KMEKLNVNTSNFKEMDE------------RFKFHRRIIA 183 (499)
T ss_dssp HHHHHHHHHHHHH-------HCCCEEEECSSCHHH------HHHTTCCCSTTSHHHHH------------HHCHHHHHHH
T ss_pred CcchHHHHHHHHh-------cCCcEEEEccCcccc------cchhhccCCCCcchhhh------------hHHHHHHHHH
Confidence 7666665555443 378999999986210 00000 000000000 0000112235
Q ss_pred HHHHHHhcCceeecChhhHHHHHhhccCCchhhhhh-c----CCccEEEEeCCCcCCCcCCCCcccccccccccccchhH
Q 009139 376 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-S----RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKV 450 (542)
Q Consensus 376 ~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~-~----~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~ 450 (542)
++..++.+|.|+++|+..++.+.... .+. . ...++.+||||||.+.|.+... .
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~-------~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~---------------~ 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHD-------LYRGAVNVEDDDKFSVIPPGVNTRVFDGEYG---------------D 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSG-------GGTTTCCTTCGGGEEECCCCBCTTTSSSCCC---------------H
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhh-------cccccccccCCCCeEEECCCcChhhcCccch---------------h
Confidence 67788999999999999988765320 011 2 3578999999999998877532 2
Q ss_pred HHHHHHHHHhC-----CCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcC---CcEEEEEec--Cc-----------hh
Q 009139 451 QCKIALQKELG-----LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGS--GD-----------PQ 509 (542)
Q Consensus 451 ~~k~~lr~~lG-----l~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~---dv~LVIvG~--G~-----------~~ 509 (542)
..+..+|+++| ++ ++.++|+|+||+.++||++.|++|++.+.+. .++|+|+|+ |+ ..
T Consensus 242 ~~~~~~r~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~ 319 (499)
T 2r60_A 242 KIKAKITKYLERDLGSER--MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKE 319 (499)
T ss_dssp HHHHHHHHHHHHHSCGGG--TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHH
T ss_pred hhHHHHHHHhcccccccC--CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchH
Confidence 34567888888 75 4778999999999999999999999998752 468999998 33 12
Q ss_pred hHHHHHHHHHHcC--CCEEEEccCC--hhhhhhhhc
Q 009139 510 FESWMRDTEATYK--DKYRGWVGFN--VPISHRITA 541 (542)
Q Consensus 510 ~~~~l~~la~~~~--~~v~~~~Gy~--~~l~~~~~A 541 (542)
|.+.+++++++++ ++| .|+|+. +++..++.+
T Consensus 320 y~~~l~~~~~~~~l~~~V-~~~G~v~~~~~~~~~~~ 354 (499)
T 2r60_A 320 ILGKIIELIDNNDCRGKV-SMFPLNSQQELAGCYAY 354 (499)
T ss_dssp HHHHHHHHHHHTTCBTTE-EEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceE-EECCCCCHHHHHHHHHh
Confidence 3788888888764 556 589994 777777654
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.90 E-value=3.8e-22 Score=207.17 Aligned_cols=264 Identities=18% Similarity=0.200 Sum_probs=183.6
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEE
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 229 (542)
++|||++|+..++|. .||+++++.+|+++| +||+|+|+++...... ...+.
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~--~~~~~----------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEE--AHAYD----------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH--HHHHH-----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccc--hhhhc-----------------------
Confidence 479999999988884 699999999999999 6999999998743210 01111
Q ss_pred EeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchh-HHHHHH
Q 009139 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLL 308 (542)
Q Consensus 230 ~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~-~~~~~l 308 (542)
...++++++++..... .. .. +...+.++++. .+||+||+|.+... ++..++
T Consensus 54 --~~~~~~~~~~~~~~~~-------------~~--~~---~~~~l~~~~~~--------~~~Dvv~~~~~~~~~~~~~~~ 105 (394)
T 3okp_A 54 --KTLDYEVIRWPRSVML-------------PT--PT---TAHAMAEIIRE--------REIDNVWFGAAAPLALMAGTA 105 (394)
T ss_dssp --TTCSSEEEEESSSSCC-------------SC--HH---HHHHHHHHHHH--------TTCSEEEESSCTTGGGGHHHH
T ss_pred --cccceEEEEccccccc-------------cc--hh---hHHHHHHHHHh--------cCCCEEEECCcchHHHHHHHH
Confidence 1246777776432211 00 11 11222233222 37999999976443 333332
Q ss_pred HHhcCCCCCCCCCc-EEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCcee
Q 009139 309 ASKYRPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (542)
Q Consensus 309 ~~~~~~~~~~~~ip-vV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi 387 (542)
+ . .++| +|+++|+.... +.. ......+++..++.+|.|+
T Consensus 106 ~-~-------~~~~~~i~~~h~~~~~----------------~~~----------------~~~~~~~~~~~~~~~d~ii 145 (394)
T 3okp_A 106 K-Q-------AGASKVIASTHGHEVG----------------WSM----------------LPGSRQSLRKIGTEVDVLT 145 (394)
T ss_dssp H-H-------TTCSEEEEECCSTHHH----------------HTT----------------SHHHHHHHHHHHHHCSEEE
T ss_pred H-h-------cCCCcEEEEeccchhh----------------hhh----------------cchhhHHHHHHHHhCCEEE
Confidence 2 2 3565 89999976210 000 0011234566788999999
Q ss_pred ecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCC
Q 009139 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (542)
Q Consensus 388 ~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~ 467 (542)
++|+..++.+.... ....++.+||||+|.+.|.|... ..+..+++++|++ ++
T Consensus 146 ~~s~~~~~~~~~~~----------~~~~~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~--~~ 197 (394)
T 3okp_A 146 YISQYTLRRFKSAF----------GSHPTFEHLPSGVDVKRFTPATP----------------EDKSATRKKLGFT--DT 197 (394)
T ss_dssp ESCHHHHHHHHHHH----------CSSSEEEECCCCBCTTTSCCCCH----------------HHHHHHHHHTTCC--TT
T ss_pred EcCHHHHHHHHHhc----------CCCCCeEEecCCcCHHHcCCCCc----------------hhhHHHHHhcCCC--cC
Confidence 99999998876532 13578999999999998877432 3567899999996 46
Q ss_pred CCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCC--hhhhhhhhc
Q 009139 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN--VPISHRITA 541 (542)
Q Consensus 468 ~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~--~~l~~~~~A 541 (542)
.++|+|+||+.++||++.+++|++.+.+ .+++|+|+|+|+ +.+.+++++..+.++| .|.|+. +++..++.+
T Consensus 198 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v-~~~g~~~~~~~~~~~~~ 272 (394)
T 3okp_A 198 TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNV-KFLGRLEYQDMINTLAA 272 (394)
T ss_dssp CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGE-EEEESCCHHHHHHHHHH
T ss_pred ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeE-EEcCCCCHHHHHHHHHh
Confidence 6999999999999999999999999875 489999999987 4777888875555666 588996 778777654
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.89 E-value=1.2e-22 Score=230.77 Aligned_cols=324 Identities=16% Similarity=0.131 Sum_probs=192.0
Q ss_pred CceEEEEEecccC---------CCcCCChHhHHHhH--------HHHHHHHCCCeEE----EEEecCCCCCcccchhhhh
Q 009139 150 VSYNIVFVTAEAA---------PYSKTGGLGDVCGS--------LPVALAARGHRVM----VVSPRYFNGTAADENFTLA 208 (542)
Q Consensus 150 ~~MkIl~Vt~e~~---------P~~~~GGl~~~v~~--------La~~L~~~GheV~----Vitp~~~~~~~~~~~~~~~ 208 (542)
..|+|+||+.+.+ | .+||..+||.+ |+++|+++||+|+ |+|....... +..|...
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~--dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~--g~~y~~~ 352 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYP--DTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAV--GTTCGER 352 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTST--TCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCT--TSSTTSS
T ss_pred ceeEEEEEcCCcccCccccCCCC--CCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCC--CCccCCc
Confidence 3489999999876 6 57999999994 7777788999886 8987653321 1122111
Q ss_pred cccCceeEEeecCCceeEEEEEeeeCCeEEEEEcCCC-------CCCCCCCCCCCCCCCCChHHHHHHHH-HHHHHhccc
Q 009139 209 KDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLC-YAACEAPLV 280 (542)
Q Consensus 209 ~~~~~~~~v~~~g~~~~~~~~~~~~~gv~v~~i~~p~-------~~~~~~~y~~~~~~~~~~~~r~~~~~-~a~~~~~~~ 280 (542)
. + .....+|+++++++... |..+..++. ... .|. ..+..+.+.
T Consensus 353 ~---------------e---~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~--------~L~---~F~~~~l~~il~~ 403 (816)
T 3s28_A 353 L---------------E---RVYDSEYCDILRVPFRTEKGIVRKWISRFEVWP--------YLE---TYTEDAAVELSKE 403 (816)
T ss_dssp E---------------E---ECTTCSSEEEEEECEEETTEEECSCCCTTTCGG--------GHH---HHHHHHHHHHHHH
T ss_pred c---------------e---eecCcCCeEEEEecCCCccccccccccHHHHHH--------HHH---HHHHHHHHHHHHh
Confidence 0 0 00113588998886422 122222221 111 222 222233222
Q ss_pred cCCCCCCCCCccEEEECCCchhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhccccccccc
Q 009139 281 LPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPT 360 (542)
Q Consensus 281 l~~~~f~~~~pDIIH~H~~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~ 360 (542)
. ..+|||||+|.|.+++++.+++.. .++|+|+|.|++..... ...+..+.... ..
T Consensus 404 ~------~~~PDVIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~------~~~~~~~~~~~---~~--- 458 (816)
T 3s28_A 404 L------NGKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY------PDSDIYWKKLD---DK--- 458 (816)
T ss_dssp C------SSCCSEEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHS------TTTTTTHHHHH---HH---
T ss_pred c------CCCCeEEEeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccc------ccccchhhhHH---HH---
Confidence 2 248999999999888887777654 37999999998731100 00011000000 00
Q ss_pred ccccccccchhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchh------hh------hhcCCccEEEEeCCCcCCC
Q 009139 361 WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH------EI------LSSRKSVLNGITNGIDITE 428 (542)
Q Consensus 361 ~~~~~~~~~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~------~~------l~~~~~ki~vIpNGVD~~~ 428 (542)
..+......++.+++.||.||++|+..++.+......++.. .+ +.....|+.|||||||.+.
T Consensus 459 ------y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~ 532 (816)
T 3s28_A 459 ------YHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI 532 (816)
T ss_dssp ------HCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTT
T ss_pred ------HHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHH
Confidence 00011223466789999999999999887643211111110 00 0011239999999999999
Q ss_pred cCCCCccc--ccccccccccchhHHHHHHHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEe
Q 009139 429 WNPSSDEH--IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG 504 (542)
Q Consensus 429 f~p~~~~~--~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG 504 (542)
|.|..... +...+. .+..........++.+|+..++++++|+|+||+.++||++.|++|++.+.+ .+++|+|+|
T Consensus 533 F~P~~~~~~Rl~~~~~--~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 533 YFPYTEEKRRLTKFHS--EIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp SCCTTCTTTCCGGGHH--HHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred cCccchhhhhhhhccc--cccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 98865321 000000 000000000122355666334578999999999999999999999999875 479999999
Q ss_pred cCch---------hhHHHHHHHHHHcC--CCEEEEccCC------hhhhhhhh
Q 009139 505 SGDP---------QFESWMRDTEATYK--DKYRGWVGFN------VPISHRIT 540 (542)
Q Consensus 505 ~G~~---------~~~~~l~~la~~~~--~~v~~~~Gy~------~~l~~~~~ 540 (542)
+|+. .+.+.+++++++++ ++| .|+|+. +++..++.
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V-~flG~~~~~v~~~eL~~~~~ 662 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQF-RWISSQMDRVRNGELYRYIC 662 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBE-EEECCCCCHHHHHHHHHHHH
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcE-EEccCccccCCHHHHHHHHH
Confidence 9872 35678888888765 455 688974 34555554
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.88 E-value=4.5e-23 Score=212.93 Aligned_cols=263 Identities=14% Similarity=0.093 Sum_probs=173.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 231 (542)
|||++++..+.| .||+++++.+|+++|+++||+|+|+++.....
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------------- 44 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------------- 44 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC---------------------------------
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC---------------------------------
Confidence 899999988777 49999999999999999999999999763211
Q ss_pred eeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHHHHh
Q 009139 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (542)
Q Consensus 232 ~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l~~~ 311 (542)
..++++++.++.+.+. +..++..+...+.+.++. .+|||||+|.+..++...+...
T Consensus 45 ~~~~~~v~~~~~~~~~---------------~~~~~~~~~~~l~~~i~~--------~~~Dvv~~~~~~~~~~~~~~~~- 100 (374)
T 2iw1_A 45 CPKAFELIQVPVKSHT---------------NHGRNAEYYAWVQNHLKE--------HPADRVVGFNKMPGLDVYFAAD- 100 (374)
T ss_dssp CCTTCEEEECCCCCSS---------------HHHHHHHHHHHHHHHHHH--------SCCSEEEESSCCTTCSEEECCS-
T ss_pred CCCCcEEEEEccCccc---------------chhhHHHHHHHHHHHHhc--------cCCCEEEEecCCCCceeeeccc-
Confidence 0145666666432210 112222222233333322 3899999998654321111000
Q ss_pred cCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHH--hcCceeec
Q 009139 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV--TADRLLTV 389 (542)
Q Consensus 312 ~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~--~ad~Vi~v 389 (542)
...++.+.+.|+... . ....+ .....+++..+. .+|.|+++
T Consensus 101 ------~~~~~~~~~~~~~~~---------~---~~~~~-------------------~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 101 ------VCYAEKVAQEKGFLY---------R---LTSRY-------------------RHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp ------CCHHHHHHHHCCHHH---------H---TSHHH-------------------HHHHHHHHHHHSTTCCCEEEES
T ss_pred ------cccceeeeecccchh---------h---hcHHH-------------------HHHHHHHHHHhhccCCcEEEEc
Confidence 123344444443210 0 00000 001123343443 69999999
Q ss_pred ChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 009139 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (542)
Q Consensus 390 S~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~ 469 (542)
|+..++.+.... ..+..++.+||||+|.+.|.|.... ..+..+++++|++ ++.+
T Consensus 144 s~~~~~~~~~~~---------~~~~~~~~vi~ngv~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~ 197 (374)
T 2iw1_A 144 TDKQIADFQKHY---------QTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNGIK--EQQN 197 (374)
T ss_dssp CHHHHHHHHHHH---------CCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTTCC--TTCE
T ss_pred CHHHHHHHHHHh---------CCChhheEEecCCcCHHhcCcccch---------------hHHHHHHHHhCCC--CCCe
Confidence 999988876431 2346789999999999888664321 2456789999986 3678
Q ss_pred EEEEEccCccccCHHHHHHHHHhhhcC---CcEEEEEecCchhhHHHHHHHHHHcC--CCEEEEccCChhhhhhhhc
Q 009139 470 LIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 470 vIlfVGRl~~~KGid~LieA~~~L~~~---dv~LVIvG~G~~~~~~~l~~la~~~~--~~v~~~~Gy~~~l~~~~~A 541 (542)
+|+|+||+.++||++.+++|++.+.+. +++|+|+|+|+. +.+++++++++ ++| .|+|+.+++..++.+
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v-~~~g~~~~~~~~~~~ 270 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNV-HFFSGRNDVSELMAA 270 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGE-EEESCCSCHHHHHHH
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcE-EECCCcccHHHHHHh
Confidence 999999999999999999999998653 899999999873 56777777664 456 588998888887764
No 10
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.88 E-value=3e-21 Score=201.68 Aligned_cols=269 Identities=16% Similarity=0.179 Sum_probs=172.6
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEEE
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 230 (542)
.|+.-+....| | ..||+++++.+|+++|+++||+|+|+++..+... .
T Consensus 13 ~~~~~~~~~~~-p--~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------------------------------~ 59 (394)
T 2jjm_A 13 HMKLKIGITCY-P--SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL------------------------------N 59 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----------------------------------
T ss_pred hheeeeehhcC-C--CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc------------------------------c
Confidence 35555555544 5 3699999999999999999999999997532110 0
Q ss_pred eeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHHHH
Q 009139 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (542)
Q Consensus 231 ~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l~~ 310 (542)
...+++.+..++.+.+.. +. +.. ..+ .+...+.+.++. .+|||||+|.+....+..++..
T Consensus 60 ~~~~~i~~~~~~~~~~~~----~~-----~~~--~~~-~~~~~l~~~l~~--------~~~Dvv~~~~~~~~~~~~~~~~ 119 (394)
T 2jjm_A 60 KVYPNIYFHEVTVNQYSV----FQ-----YPP--YDL-ALASKMAEVAQR--------ENLDILHVHYAIPHAICAYLAK 119 (394)
T ss_dssp CCCTTEEEECCCCC--------CC-----SCC--HHH-HHHHHHHHHHHH--------HTCSEEEECSSTTHHHHHHHHH
T ss_pred ccCCceEEEecccccccc----cc-----ccc--ccH-HHHHHHHHHHHH--------cCCCEEEEcchhHHHHHHHHHH
Confidence 012344444433222110 00 000 111 111222233222 3799999997654433333333
Q ss_pred hcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCceeecC
Q 009139 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (542)
Q Consensus 311 ~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~vS 390 (542)
.... .++|+|+|+|+.... ..+.. .+ ...+++..++.+|.|+++|
T Consensus 120 ~~~~----~~~p~v~~~h~~~~~---------~~~~~-~~---------------------~~~~~~~~~~~ad~ii~~s 164 (394)
T 2jjm_A 120 QMIG----ERIKIVTTLHGTDIT---------VLGSD-PS---------------------LNNLIRFGIEQSDVVTAVS 164 (394)
T ss_dssp HHTT----TCSEEEEECCHHHHH---------TTTTC-TT---------------------THHHHHHHHHHSSEEEESC
T ss_pred Hhhc----CCCCEEEEEecCccc---------ccCCC-HH---------------------HHHHHHHHHhhCCEEEECC
Confidence 2210 268999999985210 00000 00 0124566788999999999
Q ss_pred hhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCCCCE
Q 009139 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (542)
Q Consensus 391 ~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~v 470 (542)
+.+++.+.... ....++.+||||+|.+.|.+.. +..++++++++ ++.++
T Consensus 165 ~~~~~~~~~~~----------~~~~~~~vi~ngv~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 213 (394)
T 2jjm_A 165 HSLINETHELV----------KPNKDIQTVYNFIDERVYFKRD-------------------MTQLKKEYGIS--ESEKI 213 (394)
T ss_dssp HHHHHHHHHHT----------CCSSCEEECCCCCCTTTCCCCC-------------------CHHHHHHTTCC-----CE
T ss_pred HHHHHHHHHhh----------CCcccEEEecCCccHHhcCCcc-------------------hHHHHHHcCCC--CCCeE
Confidence 99988876531 1257899999999998887652 24567888885 36789
Q ss_pred EEEEccCccccCHHHHHHHHHhhhcC-CcEEEEEecCchhhHHHHHHHHHHcC--CCEEEEccCChhhhhhhhc
Q 009139 471 IGFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 471 IlfVGRl~~~KGid~LieA~~~L~~~-dv~LVIvG~G~~~~~~~l~~la~~~~--~~v~~~~Gy~~~l~~~~~A 541 (542)
|+|+||+.++||++.|++|++.+.+. +++|+|+|+|+. .+.+++++++++ ++| .|+|+.+++..++.+
T Consensus 214 i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--~~~l~~~~~~~~l~~~v-~~~g~~~~~~~~~~~ 284 (394)
T 2jjm_A 214 LIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPE--FCTILQLVKNLHIEDRV-LFLGKQDNVAELLAM 284 (394)
T ss_dssp EEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTT--HHHHHHHHHTTTCGGGB-CCCBSCSCTHHHHHT
T ss_pred EEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchH--HHHHHHHHHHcCCCCeE-EEeCchhhHHHHHHh
Confidence 99999999999999999999999764 799999999873 677888888764 456 588999888888765
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.84 E-value=5.7e-20 Score=191.73 Aligned_cols=262 Identities=16% Similarity=0.206 Sum_probs=162.5
Q ss_pred cCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeE
Q 009139 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (542)
Q Consensus 147 ~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 226 (542)
....+|||++++..++| ..||.+.++..|+++|+++||+|+|+++....... ..+.
T Consensus 16 ~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~-------------------- 71 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL--PDYV-------------------- 71 (406)
T ss_dssp -----CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC--CTTE--------------------
T ss_pred cCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC--Cccc--------------------
Confidence 34468999999976555 45999999999999999999999999976432100 0000
Q ss_pred EEEEeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHH
Q 009139 227 AFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 306 (542)
Q Consensus 227 ~~~~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~ 306 (542)
...+ +++.++..... ..+. +. . .+...+.++++. .+|||||+|.+....++.
T Consensus 72 -----~~~~-~~~~~~~~~~~---~~~~-----~~--~----~~~~~l~~~l~~--------~~~Dii~~~~~~~~~~~~ 123 (406)
T 2gek_A 72 -----VSGG-KAVPIPYNGSV---ARLR-----FG--P----ATHRKVKKWIAE--------GDFDVLHIHEPNAPSLSM 123 (406)
T ss_dssp -----EECC-CCC--------------------CC--H----HHHHHHHHHHHH--------HCCSEEEEECCCSSSHHH
T ss_pred -----ccCC-cEEeccccCCc---cccc-----cc--H----HHHHHHHHHHHh--------cCCCEEEECCccchHHHH
Confidence 0112 22222110000 0000 10 0 011122222222 279999999876654444
Q ss_pred HHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCce
Q 009139 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 386 (542)
Q Consensus 307 ~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~V 386 (542)
++... .++|+|+++|+.. +.. .+...+ ..+.+..++.+|.+
T Consensus 124 ~~~~~-------~~~~~i~~~h~~~-----~~~---------~~~~~~------------------~~~~~~~~~~~d~i 164 (406)
T 2gek_A 124 LALQA-------AEGPIVATFHTST-----TKS---------LTLSVF------------------QGILRPYHEKIIGR 164 (406)
T ss_dssp HHHHH-------EESSEEEEECCCC-----CSH---------HHHHHH------------------HSTTHHHHTTCSEE
T ss_pred HHHHh-------cCCCEEEEEcCcc-----hhh---------hhHHHH------------------HHHHHHHHhhCCEE
Confidence 44332 3789999999852 111 010000 00112457889999
Q ss_pred eecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCC
Q 009139 387 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 466 (542)
Q Consensus 387 i~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~ 466 (542)
+++|+..++.+... .+..++ +||||+|.+.|.+.... .+++ +
T Consensus 165 i~~s~~~~~~~~~~-----------~~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~--~ 206 (406)
T 2gek_A 165 IAVSDLARRWQMEA-----------LGSDAV-EIPNGVDVASFADAPLL------------------------DGYP--R 206 (406)
T ss_dssp EESSHHHHHHHHHH-----------HSSCEE-ECCCCBCHHHHHTCCCC------------------------TTCS--C
T ss_pred EECCHHHHHHHHHh-----------cCCCcE-EecCCCChhhcCCCchh------------------------hhcc--C
Confidence 99999998887642 134678 99999998777654311 1121 2
Q ss_pred CCCEEEEEccC-ccccCHHHHHHHHHhhhc--CCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCCh--hhhhhhhc
Q 009139 467 DCPLIGFIGRL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV--PISHRITA 541 (542)
Q Consensus 467 ~~~vIlfVGRl-~~~KGid~LieA~~~L~~--~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~--~l~~~~~A 541 (542)
+.++|+|+||+ .++||++.+++|++.+.+ .+++|+|+|+|+. +.++++++++.++| .+.|+.. ++..++.+
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v-~~~g~~~~~~~~~~~~~ 282 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHL-RFLGQVDDATKASAMRS 282 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGE-EECCSCCHHHHHHHHHH
T ss_pred CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcE-EEEecCCHHHHHHHHHH
Confidence 56899999999 999999999999999975 4899999999974 67777777765566 5899853 45666543
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.83 E-value=4.7e-20 Score=194.02 Aligned_cols=263 Identities=15% Similarity=0.113 Sum_probs=163.1
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEE
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 229 (542)
++|||++++.. + ..||+++++.+|+++|+++||+|+|++..... ..+... . .+
T Consensus 39 ~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-----~~~~~~-~-----~~------------ 91 (416)
T 2x6q_A 39 KGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT-----EFFNVT-K-----TF------------ 91 (416)
T ss_dssp TTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH-----HHHHHH-H-----HH------------
T ss_pred hccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc-----chhhhh-c-----cc------------
Confidence 56999999976 3 36999999999999999999999999865311 111000 0 00
Q ss_pred EeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHH-HHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHH
Q 009139 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFR-YTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (542)
Q Consensus 230 ~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r-~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l 308 (542)
.....+.+. +. ++....+ +..+.....+. ++ ..+|||||+|++....+..+
T Consensus 92 ~~~~~~~~~--------------~~-----~~~~~~~~~~~~~~~~~~~---l~-----~~~~Dvv~~~~~~~~~~~~~- 143 (416)
T 2x6q_A 92 HNALQGNES--------------LK-----LTEEMKELYLNVNRENSKF---ID-----LSSFDYVLVHDPQPAALIEF- 143 (416)
T ss_dssp HHHHTTCCS--------------CC-----CCHHHHHHHHHHHHHHHHS---SC-----GGGSSEEEEESSTTGGGGGG-
T ss_pred ceeeccccc--------------cc-----ccHHHHHHHHHHHHHHHHH---Hh-----hcCCCEEEEeccchhhHHHH-
Confidence 000011110 00 0111111 11111222222 21 24899999998765433221
Q ss_pred HHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCcee-
Q 009139 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL- 387 (542)
Q Consensus 309 ~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi- 387 (542)
.. ..+|+|+|+|+.... + ..++ ....+..+..+|.++
T Consensus 144 ---~~-----~~~p~v~~~h~~~~~---~----------~~~~---------------------~~~~~~~~~~~~~~i~ 181 (416)
T 2x6q_A 144 ---YE-----KKSPWLWRCHIDLSS---P----------NREF---------------------WEFLRRFVEKYDRYIF 181 (416)
T ss_dssp ---SC-----CCSCEEEECCSCCSS---C----------CHHH---------------------HHHHHHHHTTSSEEEE
T ss_pred ---HH-----hcCCEEEEEccccCC---c----------cHHH---------------------HHHHHHHHHhCCEEEE
Confidence 11 248999999986211 0 0000 112233456777776
Q ss_pred ecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCC
Q 009139 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (542)
Q Consensus 388 ~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~ 467 (542)
++|+...+. ....++.+||||+|...+.+.... ...+..+++++|++ ++
T Consensus 182 ~~s~~~~~~---------------~~~~~~~vi~ngvd~~~~~~~~~~--------------~~~~~~~r~~~~~~--~~ 230 (416)
T 2x6q_A 182 HLPEYVQPE---------------LDRNKAVIMPPSIDPLSEKNVELK--------------QTEILRILERFDVD--PE 230 (416)
T ss_dssp SSGGGSCTT---------------SCTTTEEECCCCBCTTSTTTSCCC--------------HHHHHHHHHHTTCC--TT
T ss_pred echHHHHhh---------------CCccceEEeCCCCChhhhcccccC--------------hhhHHHHHHHhCCC--CC
Confidence 555543221 124789999999998777543211 13467789999986 47
Q ss_pred CCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEecCc---hhhHHHHHHHHHHcC--CCEEEEccCC-----hhh
Q 009139 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD---PQFESWMRDTEATYK--DKYRGWVGFN-----VPI 535 (542)
Q Consensus 468 ~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG~G~---~~~~~~l~~la~~~~--~~v~~~~Gy~-----~~l 535 (542)
.++|+|+||+.++||++.|++|++.+.+ .+++|+|+|+|+ +.+.+.+++++++++ ++| .|+|+. +++
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V-~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDV-KVLTNLIGVHAREV 309 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTE-EEEEGGGTCCHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcE-EEecccCCCCHHHH
Confidence 7899999999999999999999999875 489999999996 334667778777764 466 578863 367
Q ss_pred hhhhhc
Q 009139 536 SHRITA 541 (542)
Q Consensus 536 ~~~~~A 541 (542)
..++.+
T Consensus 310 ~~~~~~ 315 (416)
T 2x6q_A 310 NAFQRA 315 (416)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766653
No 13
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.83 E-value=4.7e-20 Score=188.90 Aligned_cols=216 Identities=13% Similarity=0.071 Sum_probs=153.6
Q ss_pred ceEEEEEecc--------c---CCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEee
Q 009139 151 SYNIVFVTAE--------A---APYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC 219 (542)
Q Consensus 151 ~MkIl~Vt~e--------~---~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (542)
+|||++++.. + +| ...||+++++.+|+++|+++||+|+|+++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------------------
T ss_pred ccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------------------
Confidence 5999999988 4 34 23699999999999999999999999997642210
Q ss_pred cCCceeEEEEEeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCC
Q 009139 220 FGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 299 (542)
Q Consensus 220 ~g~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~ 299 (542)
.++++++.. + ... .+.+.++. .+|||||+|.+
T Consensus 62 -------------~~~~~~~~~--~------------------~~~-------~l~~~l~~--------~~~Dvi~~~~~ 93 (342)
T 2iuy_A 62 -------------RPGLTVVPA--G------------------EPE-------EIERWLRT--------ADVDVVHDHSG 93 (342)
T ss_dssp -------------STTEEECSC--C------------------SHH-------HHHHHHHH--------CCCSEEEECSS
T ss_pred -------------CCcceeccC--C------------------cHH-------HHHHHHHh--------cCCCEEEECCc
Confidence 123333210 0 011 11122221 37999999987
Q ss_pred chhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHH
Q 009139 300 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 379 (542)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~ 379 (542)
...+.. .. ..++| |+|+|+.... .
T Consensus 94 ~~~~~~----~~------~~~~p-v~~~h~~~~~-----------------~---------------------------- 117 (342)
T 2iuy_A 94 GVIGPA----GL------PPGTA-FISSHHFTTR-----------------P---------------------------- 117 (342)
T ss_dssp SSSCST----TC------CTTCE-EEEEECSSSB-----------------C----------------------------
T ss_pred hhhHHH----Hh------hcCCC-EEEecCCCCC-----------------c----------------------------
Confidence 654321 11 25789 9999986210 0
Q ss_pred HHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHH
Q 009139 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (542)
Q Consensus 380 l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~ 459 (542)
..+|.|+++|+..++.+.. ..++.+||||+|.+.|.+...
T Consensus 118 -~~~d~ii~~S~~~~~~~~~--------------~~~~~vi~ngvd~~~~~~~~~------------------------- 157 (342)
T 2iuy_A 118 -VNPVGCTYSSRAQRAHCGG--------------GDDAPVIPIPVDPARYRSAAD------------------------- 157 (342)
T ss_dssp -SCCTTEEESCHHHHHHTTC--------------CTTSCBCCCCBCGGGSCCSTT-------------------------
T ss_pred -ccceEEEEcCHHHHHHHhc--------------CCceEEEcCCCChhhcCcccc-------------------------
Confidence 0189999999988776531 467889999999988876421
Q ss_pred hCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCCh--hhhh
Q 009139 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV--PISH 537 (542)
Q Consensus 460 lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~--~l~~ 537 (542)
.. ++.++|+|+||+.++||++.|++|++.+ +++|+|+|+|+ ..+.+++++++++++| .|+|+.. ++..
T Consensus 158 -~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v-~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 158 -QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTV-EPIGEVGGERRLD 227 (342)
T ss_dssp -CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTE-EECCCCCHHHHHH
T ss_pred -cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCE-EEeccCCHHHHHH
Confidence 01 2567899999999999999999999987 79999999997 4778888888887677 5899954 4466
Q ss_pred hhhc
Q 009139 538 RITA 541 (542)
Q Consensus 538 ~~~A 541 (542)
++.+
T Consensus 228 ~~~~ 231 (342)
T 2iuy_A 228 LLAS 231 (342)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 14
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.82 E-value=1.2e-19 Score=199.01 Aligned_cols=299 Identities=15% Similarity=0.126 Sum_probs=186.5
Q ss_pred EEEEecccCCCcCCChHhHHHhHHHHHHHH-CCCeEEEEEecCCCCCc--------ccch--------hhhhcccCceeE
Q 009139 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTA--------ADEN--------FTLAKDLGCCMK 216 (542)
Q Consensus 154 Il~Vt~e~~P~~~~GGl~~~v~~La~~L~~-~GheV~Vitp~~~~~~~--------~~~~--------~~~~~~~~~~~~ 216 (542)
+.-+++|.+- ++||+-+++..-|..+++ .|-+..+|.|....... .++. +...++ .
T Consensus 30 lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~-----~ 102 (725)
T 3nb0_A 30 LFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQ-----T 102 (725)
T ss_dssp EEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHH-----H
T ss_pred EEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHH-----H
Confidence 4448899887 789999999999999887 59999999996332110 0000 111000 0
Q ss_pred EeecCCceeEEEEEeeeCCeE-EEEEcCCCCCCC-CCCCCCCC----------CCCCChHHHHHHHHHHHHHhccccCCC
Q 009139 217 ICCFGGEQEIAFFHEYREGVD-WVFVDHPSYHRP-GNPYGDIN----------GAFGDNQFRYTLLCYAACEAPLVLPLG 284 (542)
Q Consensus 217 v~~~g~~~~~~~~~~~~~gv~-v~~i~~p~~~~~-~~~y~~~~----------~~~~~~~~r~~~~~~a~~~~~~~l~~~ 284 (542)
+..-|-...++-| .++|-+ ++.++...+... ..++...| ..+.++..+|++++.++++.+..+.
T Consensus 103 ~~~~G~~v~~GrW--~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~-- 178 (725)
T 3nb0_A 103 MESRGVHFVYGRW--LIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLD-- 178 (725)
T ss_dssp HHTTTCCEEEEEE--SSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHCCCeEEEEEE--ecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcC--
Confidence 0001212223333 456655 445554432211 11111000 0123566778888888777654432
Q ss_pred CCCCCCccEEEECCCchhHHHHHHHHhcCCCCCCCCCcEEEEecCCC---c---CCCCchh-hhhhcCCChhhhcccccc
Q 009139 285 GFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS---H---QGVEPAA-TYKNLGLPSEWYGALEWV 357 (542)
Q Consensus 285 ~f~~~~pDIIH~H~~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~---~---~g~~~~~-~~~~lgl~~~~~~~l~~~ 357 (542)
..+|||+|+|+|++++++.+++..+ .++|+|+|+|++. + +|.++.. .++.++++...
T Consensus 179 ---~~~pdIiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea------- 242 (725)
T 3nb0_A 179 ---SQHAIVAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEA------- 242 (725)
T ss_dssp ---CSEEEEEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHH-------
T ss_pred ---CCCCcEEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhh-------
Confidence 2379999999999999999887543 5899999999984 2 4544321 12222222111
Q ss_pred cccccccccccchhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccc
Q 009139 358 FPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHI 437 (542)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~ 437 (542)
..+..+...++++.++..||+|+|||+.+++++.. ++..+++++ ||||||++.|.|...
T Consensus 243 -------~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~---------Ll~r~~d~i--IpNGID~~~f~p~~~--- 301 (725)
T 3nb0_A 243 -------GRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEH---------LLKRKPDGI--LPNGLNVIKFQAFHE--- 301 (725)
T ss_dssp -------HHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH---------HTSSCCSEE--CCCCBCCCCCSSTTH---
T ss_pred -------hhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH---------HhcCCCCEE--EcCCccccccCcchh---
Confidence 01223456889999999999999999999999874 233344444 999999999988521
Q ss_pred cccccccccchhHHHHHHHHHHh------CCCCCCCC-CEEEEEccCc-cccCHHHHHHHHHhhhc----C-----CcEE
Q 009139 438 ASHYSIDDLSGKVQCKIALQKEL------GLPIRPDC-PLIGFIGRLD-YQKGIDLIRLAAPEILA----D-----DIQF 500 (542)
Q Consensus 438 ~~~~~~~d~~~k~~~k~~lr~~l------Gl~~~~~~-~vIlfVGRl~-~~KGid~LieA~~~L~~----~-----dv~L 500 (542)
....|..+|+++++.+ |++.++++ ++|..+||++ .+||+|+|++|+.+|.. . -+.|
T Consensus 302 -------~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf 374 (725)
T 3nb0_A 302 -------FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAF 374 (725)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred -------hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEE
Confidence 1123456666665544 44433244 4555589999 68999999999999862 1 2788
Q ss_pred EEEecCc
Q 009139 501 VMLGSGD 507 (542)
Q Consensus 501 VIvG~G~ 507 (542)
+|+..+.
T Consensus 375 ii~p~~~ 381 (725)
T 3nb0_A 375 IVMPAKN 381 (725)
T ss_dssp EECCCCE
T ss_pred EEeCCCC
Confidence 8887763
No 15
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.81 E-value=4.5e-20 Score=205.08 Aligned_cols=247 Identities=15% Similarity=0.060 Sum_probs=178.0
Q ss_pred CccEEEECCCchhHHHH-HHHHhcCCCCCC-------CCCcEEEEecCCCcCCC--CchhhhhhcCCCh----------h
Q 009139 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGVY-------KDARSILVIHNLSHQGV--EPAATYKNLGLPS----------E 349 (542)
Q Consensus 290 ~pDIIH~H~~~~~~~~~-~l~~~~~~~~~~-------~~ipvV~TiH~~~~~g~--~~~~~~~~lgl~~----------~ 349 (542)
+||+||+|+||+++++. +++.....++.. .+..+++|.|++.++|. ||...+..+ +|. .
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~-lpr~~~ii~~I~~~ 367 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQL-FWRVWEIIAEIDRR 367 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHH-hHHHHHHHcCcCHH
Confidence 68999999999998877 543321000000 24679999999998886 555433221 111 1
Q ss_pred hhcccccccccc-ccc--ccccchhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcC
Q 009139 350 WYGALEWVFPTW-ART--HALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 426 (542)
Q Consensus 350 ~~~~l~~~~~~~-~~~--~~~~~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~ 426 (542)
++..+... +.. .+. ..+.....++|.+.++..|+.|.+||+.+++.+.+..++ .++...++|+..|.||||.
T Consensus 368 ~~~~~~~~-~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~----~~~~~~p~kf~~iTNGI~~ 442 (796)
T 2c4m_A 368 FRLERAAD-GLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA----DWYALWPEKFNNKTNGVTP 442 (796)
T ss_dssp HHHHHHHT-TCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH----HHHHHCGGGEEECCCCBCT
T ss_pred HHHHHHhc-CCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh----hHHHcCccccccccCCcch
Confidence 11100000 000 000 011123357899999999999999999999999865543 3344568899999999999
Q ss_pred CCc----CCCCccccccccc-----------------ccc-------cchhHHHHHH----HHHHhCCCCCCCCCEEEEE
Q 009139 427 TEW----NPSSDEHIASHYS-----------------IDD-------LSGKVQCKIA----LQKELGLPIRPDCPLIGFI 474 (542)
Q Consensus 427 ~~f----~p~~~~~~~~~~~-----------------~~d-------~~~k~~~k~~----lr~~lGl~~~~~~~vIlfV 474 (542)
.+| .|..++.+...++ .+| ...|..+|.+ +++++|++.+++.+++++|
T Consensus 443 rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~v 522 (796)
T 2c4m_A 443 RRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQI 522 (796)
T ss_dssp CCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred HHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEe
Confidence 999 6665555555555 555 2467778888 4899999888899999999
Q ss_pred ccCccccCHHH-HHHHHHhhhc---------CCcEEEEEecCchhhHHH------HHHHHH------HcCC--CEEEEcc
Q 009139 475 GRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTEA------TYKD--KYRGWVG 530 (542)
Q Consensus 475 GRl~~~KGid~-LieA~~~L~~---------~dv~LVIvG~G~~~~~~~------l~~la~------~~~~--~v~~~~G 530 (542)
.|++.+||+++ ++..+.++.+ .++++|++|++.+.|+.. +..+++ ++++ +|++..+
T Consensus 523 kRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n 602 (796)
T 2c4m_A 523 KRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVEN 602 (796)
T ss_dssp CCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT
T ss_pred ecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECC
Confidence 99999999999 8888887753 379999999998877766 888887 6788 8988889
Q ss_pred CChhhhhhhhcC
Q 009139 531 FNVPISHRITAG 542 (542)
Q Consensus 531 y~~~l~~~~~A~ 542 (542)
|+..++++|+||
T Consensus 603 Y~vslA~~I~~g 614 (796)
T 2c4m_A 603 YNVSPAEHILPA 614 (796)
T ss_dssp CCHHHHHHHGGG
T ss_pred CCHHHHHHHhhh
Confidence 999999999986
No 16
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.81 E-value=5.1e-20 Score=204.67 Aligned_cols=248 Identities=18% Similarity=0.137 Sum_probs=177.8
Q ss_pred CccEEEECCCchhHHHH-HHHHhcCCCCC-----C--CCCcEEEEecCCCcCCC--CchhhhhhcCCChhhh--------
Q 009139 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGV-----Y--KDARSILVIHNLSHQGV--EPAATYKNLGLPSEWY-------- 351 (542)
Q Consensus 290 ~pDIIH~H~~~~~~~~~-~l~~~~~~~~~-----~--~~ipvV~TiH~~~~~g~--~~~~~~~~lgl~~~~~-------- 351 (542)
+||+||+|+||+++++. +++.....++. . .+..+++|.|++.++|. ||...+..+ +|..+.
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~-lpr~~~ii~~I~~~ 377 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHMQIINEINTR 377 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHH-hHHHHHHHhccCHH
Confidence 68999999999998877 54332100000 0 35789999999988886 554433221 111110
Q ss_pred --cccccccccc-ccc--ccccchhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcC
Q 009139 352 --GALEWVFPTW-ART--HALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 426 (542)
Q Consensus 352 --~~l~~~~~~~-~~~--~~~~~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~ 426 (542)
..+...++.. .+. ..+.....++|.+.++..|+.|.+||+.+++.+.+..++ .++...++|+..|.||||.
T Consensus 378 f~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~----~~~~~~p~k~~~iTNGI~~ 453 (796)
T 1l5w_A 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFP----EYHQLWPNKFHNVTNGITP 453 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSH----HHHHHCGGGEEECCCCBCH
T ss_pred HHHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHhh----HHHHhCccccCCCcCCCcH
Confidence 0000001100 000 011123357799999999999999999999999865542 3444567899999999999
Q ss_pred CCc----CCCCccccccccc----------------ccc------c-chhHHHHHH----HHHHhCCCCCCCCCEEEEEc
Q 009139 427 TEW----NPSSDEHIASHYS----------------IDD------L-SGKVQCKIA----LQKELGLPIRPDCPLIGFIG 475 (542)
Q Consensus 427 ~~f----~p~~~~~~~~~~~----------------~~d------~-~~k~~~k~~----lr~~lGl~~~~~~~vIlfVG 475 (542)
.+| .|..++.+...++ .+| + ..|..+|.+ +++++|++.+++.+++++|.
T Consensus 454 rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vk 533 (796)
T 1l5w_A 454 RRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIK 533 (796)
T ss_dssp HHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEES
T ss_pred HHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeee
Confidence 999 6665555655565 444 2 467777888 58999998888999999999
Q ss_pred cCccccCHHH-HHHHHHhhhc---------CCcEEEEEecCchhhHHH------HHHHHH------HcCC--CEEEEccC
Q 009139 476 RLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTEA------TYKD--KYRGWVGF 531 (542)
Q Consensus 476 Rl~~~KGid~-LieA~~~L~~---------~dv~LVIvG~G~~~~~~~------l~~la~------~~~~--~v~~~~Gy 531 (542)
|++.+||+++ ++..+.++.+ .+++||++|++.+.|+.. +.++++ ++++ +|++..+|
T Consensus 534 Rl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY 613 (796)
T 1l5w_A 534 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDY 613 (796)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSC
T ss_pred cchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCC
Confidence 9999999999 8888887765 479999999998877766 788877 6777 88877899
Q ss_pred ChhhhhhhhcC
Q 009139 532 NVPISHRITAG 542 (542)
Q Consensus 532 ~~~l~~~~~A~ 542 (542)
+..++++|+||
T Consensus 614 ~vslA~~I~~g 624 (796)
T 1l5w_A 614 CVSAAEKLIPA 624 (796)
T ss_dssp CHHHHHHHGGG
T ss_pred CHHHHHHHhhh
Confidence 99999999986
No 17
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.79 E-value=1.2e-18 Score=182.79 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=99.0
Q ss_pred HHhcC--ceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHH
Q 009139 380 IVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (542)
Q Consensus 380 l~~ad--~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr 457 (542)
++.+| .|+++|+..++.+... | . +.++.+||||+|.+.|. ..+
T Consensus 129 ~~~~~~~~ii~~S~~~~~~~~~~----~------~-~~~~~vi~ngvd~~~~~------------------------~~~ 173 (413)
T 3oy2_A 129 FSHPKVVGVMAMSKCWISDICNY----G------C-KVPINIVSHFVDTKTIY------------------------DAR 173 (413)
T ss_dssp GGCTTEEEEEESSTHHHHHHHHT----T------C-CSCEEECCCCCCCCCCT------------------------THH
T ss_pred HhccCCceEEEcCHHHHHHHHHc----C------C-CCceEEeCCCCCHHHHH------------------------HHH
Confidence 45677 9999999999888751 1 2 57899999999998771 245
Q ss_pred HHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEecCchh----hHHHHHHHHHHcC--CC-----
Q 009139 458 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ----FESWMRDTEATYK--DK----- 524 (542)
Q Consensus 458 ~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG~G~~~----~~~~l~~la~~~~--~~----- 524 (542)
++++++...+.++|+|+||+.++||++.|++|++.+.+ .+++|+|+|+|+.. +++.+++++++++ ++
T Consensus 174 ~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~ 253 (413)
T 3oy2_A 174 KLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLN 253 (413)
T ss_dssp HHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHT
T ss_pred HhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCccccccccc
Confidence 67787632367899999999999999999999999865 48999999999753 3478888887764 32
Q ss_pred -EEEEccC--Chhhhhhhhc
Q 009139 525 -YRGWVGF--NVPISHRITA 541 (542)
Q Consensus 525 -v~~~~Gy--~~~l~~~~~A 541 (542)
++.+.|+ ++++..++.+
T Consensus 254 ~vv~~~g~~~~~~~~~~~~~ 273 (413)
T 3oy2_A 254 KIMINRTVLTDERVDMMYNA 273 (413)
T ss_dssp TEEEECSCCCHHHHHHHHHH
T ss_pred ceeeccCcCCHHHHHHHHHh
Confidence 5678898 5578777654
No 18
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.77 E-value=2.6e-19 Score=199.71 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=173.8
Q ss_pred CccEEEECCCchhHHHH-HHHHhcCCCCCC-------CCCcEEEEecCCCcCCC--CchhhhhhcCCCh----------h
Q 009139 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGVY-------KDARSILVIHNLSHQGV--EPAATYKNLGLPS----------E 349 (542)
Q Consensus 290 ~pDIIH~H~~~~~~~~~-~l~~~~~~~~~~-------~~ipvV~TiH~~~~~g~--~~~~~~~~lgl~~----------~ 349 (542)
+||+||+|+||+++++. +++.....++.. .+..+++|.|++.++|. ||...+..+ +|. .
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~l-LPr~~~ii~~in~~ 398 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQR 398 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHh-CchHHHHHHHHHHH
Confidence 58899999999998887 554322111100 12349999999998887 665544332 111 1
Q ss_pred hhccccccccc----cccccccc--chhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCC
Q 009139 350 WYGALEWVFPT----WARTHALD--TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (542)
Q Consensus 350 ~~~~l~~~~~~----~~~~~~~~--~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNG 423 (542)
++..+...++. +.+...++ ....+++.+.++..|+.|.+||+.+++.+.+..++ .++...++++..|.||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~----~~~~~~p~k~~~iTNG 474 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK----DFYELEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH----HHHHHCGGGEEECCCC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhH----HHHHcChhhcccccCC
Confidence 11100001111 10111112 23457899999999999999999999999765543 3444568899999999
Q ss_pred CcCCCc----CCCCccccccc-----------------cccc-cc-----chhHHHHHH----HHHHhCCCCCCCCCEEE
Q 009139 424 IDITEW----NPSSDEHIASH-----------------YSID-DL-----SGKVQCKIA----LQKELGLPIRPDCPLIG 472 (542)
Q Consensus 424 VD~~~f----~p~~~~~~~~~-----------------~~~~-d~-----~~k~~~k~~----lr~~lGl~~~~~~~vIl 472 (542)
||..+| +|..++.+... |..+ ++ ..|..+|.+ +++++|++.+++.++++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 56544334322 4432 23 356677776 88899998888999999
Q ss_pred EEccCccccCHHHH-HHHHHhhh---cC------CcEEEEEecCchhhHHH------HHHHHHHc------CC--CEEEE
Q 009139 473 FIGRLDYQKGIDLI-RLAAPEIL---AD------DIQFVMLGSGDPQFESW------MRDTEATY------KD--KYRGW 528 (542)
Q Consensus 473 fVGRl~~~KGid~L-ieA~~~L~---~~------dv~LVIvG~G~~~~~~~------l~~la~~~------~~--~v~~~ 528 (542)
+|.|++.+||++++ +..+.++. +. +++||++|++.+.|+.. +.++++.+ ++ +|++.
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 99999999999998 88888774 22 57999999998877666 88888766 66 88888
Q ss_pred ccCChhhhhhhhcC
Q 009139 529 VGFNVPISHRITAG 542 (542)
Q Consensus 529 ~Gy~~~l~~~~~A~ 542 (542)
.+|+..++++|+||
T Consensus 635 ~nYdvslA~~I~~g 648 (824)
T 2gj4_A 635 ENYRVSLAEKVIPA 648 (824)
T ss_dssp TTCCHHHHHHHGGG
T ss_pred CCCCHHHHHHHhhh
Confidence 89999999999986
No 19
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.67 E-value=3.3e-16 Score=161.25 Aligned_cols=246 Identities=12% Similarity=-0.021 Sum_probs=151.7
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEEEE
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 230 (542)
.|||++++. ..||....+..|+++|+++||+|+++++..... ...+
T Consensus 6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~---~~~~------------------------- 51 (364)
T 1f0k_A 6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME---ADLV------------------------- 51 (364)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH---HHHG-------------------------
T ss_pred CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcch---hhhc-------------------------
Confidence 489999973 358999999999999999999999999753210 0000
Q ss_pred eeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHHHH
Q 009139 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (542)
Q Consensus 231 ~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l~~ 310 (542)
...|++++.++.+.+.+.. ... .+ ....++......+.+.++. .+||+||+|.....+...+++.
T Consensus 52 -~~~g~~~~~~~~~~~~~~~-~~~----~~-~~~~~~~~~~~~l~~~l~~--------~~pDvv~~~~~~~~~~~~~~~~ 116 (364)
T 1f0k_A 52 -PKHGIEIDFIRISGLRGKG-IKA----LI-AAPLRIFNAWRQARAIMKA--------YKPDVVLGMGGYVSGPGGLAAW 116 (364)
T ss_dssp -GGGTCEEEECCCCCCTTCC-HHH----HH-TCHHHHHHHHHHHHHHHHH--------HCCSEEEECSSTTHHHHHHHHH
T ss_pred -cccCCceEEecCCccCcCc-cHH----HH-HHHHHHHHHHHHHHHHHHh--------cCCCEEEEeCCcCchHHHHHHH
Confidence 0135666655433221100 000 00 0011111111122222222 3899999997654443333333
Q ss_pred hcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcCceeecC
Q 009139 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (542)
Q Consensus 311 ~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~Vi~vS 390 (542)
. .++|+|++.|+.. +. +. .+...+.+|.++++|
T Consensus 117 ~-------~~~p~v~~~~~~~-----~~-----------~~------------------------~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 117 S-------LGIPVVLHEQNGI-----AG-----------LT------------------------NKWLAKIATKVMQAF 149 (364)
T ss_dssp H-------TTCCEEEEECSSS-----CC-----------HH------------------------HHHHTTTCSEEEESS
T ss_pred H-------cCCCEEEEecCCC-----Cc-----------HH------------------------HHHHHHhCCEEEecC
Confidence 2 4799999999751 10 00 011234689999877
Q ss_pred hhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCCCCCCCCE
Q 009139 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (542)
Q Consensus 391 ~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~v 470 (542)
+.. + + ++.+|+||+|.+.|.+.. .+++++++ ++.++
T Consensus 150 ~~~----------------~---~-~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (364)
T 1f0k_A 150 PGA----------------F---P-NAEVVGNPVRTDVLALPL----------------------PQQRLAGR--EGPVR 185 (364)
T ss_dssp TTS----------------S---S-SCEECCCCCCHHHHTSCC----------------------HHHHHTTC--CSSEE
T ss_pred hhh----------------c---C-CceEeCCccchhhcccch----------------------hhhhcccC--CCCcE
Confidence 532 0 1 567999999977665421 13466764 34554
Q ss_pred -EEEEccCccccCHHHHHHHHHhhhcCCcE-EEEEecCchhhHHHHHHHHHHcC-CCEEEEccCChhhhhhhhc
Q 009139 471 -IGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 471 -IlfVGRl~~~KGid~LieA~~~L~~~dv~-LVIvG~G~~~~~~~l~~la~~~~-~~v~~~~Gy~~~l~~~~~A 541 (542)
+++.||+.++||++.|++|++.+.+ +++ ++++|+|+ .+.+++++++++ ++| .|+||.+++..++.+
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~---~~~l~~~~~~~~~~~v-~~~g~~~~~~~~~~~ 254 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS---QQSVEQAYAEAGQPQH-KVTEFIDDMAAAYAW 254 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC---HHHHHHHHHHTTCTTS-EEESCCSCHHHHHHH
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch---HHHHHHHHhhcCCCce-EEecchhhHHHHHHh
Confidence 4556799999999999999999866 788 57789987 366777777765 465 589998888877754
No 20
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.56 E-value=1.1e-14 Score=153.88 Aligned_cols=112 Identities=18% Similarity=0.167 Sum_probs=78.2
Q ss_pred HHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHH
Q 009139 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (542)
Q Consensus 375 ~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~ 454 (542)
+++..++.+|.|+++|+..++.+.. .. ++.+||||+|.+.|.+....
T Consensus 171 ~~~~~~~~ad~vi~~S~~~~~~~~~-------------~~-~i~vipngvd~~~f~~~~~~------------------- 217 (406)
T 2hy7_A 171 EFDRVAPTLDVIALVSPAMAAEVVS-------------RD-NVFHVGHGVDHNLDQLGDPS------------------- 217 (406)
T ss_dssp HHHHHGGGCSEEEESCGGGGGGCSC-------------ST-TEEECCCCBCTTHHHHHCSC-------------------
T ss_pred HHHHHHHhCCEEEEcCHHHHHHHHh-------------cC-CEEEEcCCcChHhcCccccc-------------------
Confidence 5567788999999999988766532 12 89999999998877543110
Q ss_pred HHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCC--
Q 009139 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN-- 532 (542)
Q Consensus 455 ~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~-- 532 (542)
+ .++.++|+|+||+.++||+ ++++.+. ..+++|+|+|+|+ .+++ ...++| .|+|+.
T Consensus 218 --------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V-~f~G~~~~ 275 (406)
T 2hy7_A 218 --------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNV-IVYGEMKH 275 (406)
T ss_dssp --------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTE-EEECCCCH
T ss_pred --------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCE-EEcCCCCH
Confidence 1 1234899999999999999 4444332 2589999999986 1111 134566 588985
Q ss_pred hhhhhhhhc
Q 009139 533 VPISHRITA 541 (542)
Q Consensus 533 ~~l~~~~~A 541 (542)
+++..++.+
T Consensus 276 ~~l~~~~~~ 284 (406)
T 2hy7_A 276 AQTIGYIKH 284 (406)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 577777654
No 21
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.53 E-value=7e-14 Score=148.11 Aligned_cols=257 Identities=11% Similarity=0.087 Sum_probs=146.8
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCceeEEE
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 228 (542)
..+|||+++++.|.|....||.. .+.+|+++|+++||+|+|+++.... . .... ..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~-~--~~~~-~~-------------------- 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATP-N--PKDL-QS-------------------- 98 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCC-C--HHHH-GG--------------------
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCC-C--hHHH-Hh--------------------
Confidence 46799999999998842246664 6899999999999999999986421 0 0000 00
Q ss_pred EEeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCchhHHHHHH
Q 009139 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (542)
Q Consensus 229 ~~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~~~~~~~l 308 (542)
..+.....+... . . +...... +... ....+ ...++||||+|.|.++.....+
T Consensus 99 ----~~~~~~~~~~~~-----~-~-------~~~~i~~---~~~~---~~~~~-----~~~~~Dvv~a~~~~~~~~~~~~ 150 (413)
T 2x0d_A 99 ----FKSFKYVMPEED-----K-D-------FALQIVP---FNDR---YNRTI-----PVAKHDIFIATAWWTAYAAQRI 150 (413)
T ss_dssp ----GTTSEECCTTCC-----C-C-------CSEEEEE---CSCC---TTCCE-----EECTTEEEEECSHHHHHHHHHH
T ss_pred ----hhccceeeccCC-----c-c-------ccceeee---cccc---ccccc-----cCCCCCEEEEehHHHHHHHHHh
Confidence 011111000000 0 0 0000000 0000 00000 0136899999998766554333
Q ss_pred HH----hcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhcC
Q 009139 309 AS----KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD 384 (542)
Q Consensus 309 ~~----~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 384 (542)
.. .+. ....|.++.+|+.. +.. ...... ..+.+..+..++
T Consensus 151 ~~~~~~~~~----~~~~~~~~~v~~~~-----~~~----~~~~~~-----------------------~~~~~~~~~~~~ 194 (413)
T 2x0d_A 151 VSWQSDTYG----IPPNKILYIIQDFE-----PGF----YQWSSQ-----------------------YVLAESTYKYRG 194 (413)
T ss_dssp HHHHHHHHT----CCCCCEEEEECSCG-----GGG----SCSSHH-----------------------HHHHHHTTSCCS
T ss_pred hhhhhhhcc----cccCcEEEEEeech-----hhc----CccChH-----------------------HHHHHHHhccCC
Confidence 11 110 02467788788752 100 000000 012223334444
Q ss_pred --ceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCC
Q 009139 385 --RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 462 (542)
Q Consensus 385 --~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl 462 (542)
.++++|+.+++.+... | .+..++.+|+||+|.+.|.+... +
T Consensus 195 ~~~vi~~S~~~~~~l~~~--g--------~~~~~~~~i~~g~d~~~~~~~~~--------------------------~- 237 (413)
T 2x0d_A 195 PQIAVFNSELLKQYFNNK--G--------YNFTDEYFFQPKINTTLKNYIND--------------------------K- 237 (413)
T ss_dssp CEEEEEESHHHHHHHHHH--T--------CCCSEEEEECCCCCHHHHTTTTS--------------------------C-
T ss_pred ceEEEEcCHHHHHHHHHc--C--------CCCCceEEeCCCcCchhhccccc--------------------------c-
Confidence 4899999999988752 1 12356889999999765543210 1
Q ss_pred CCCCCCCEEEEEccC-ccccCHHHHHHHHHhhhc--C---CcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccC--Chh
Q 009139 463 PIRPDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--D---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVP 534 (542)
Q Consensus 463 ~~~~~~~vIlfVGRl-~~~KGid~LieA~~~L~~--~---dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy--~~~ 534 (542)
.++.+.|+|+||+ .++||++.|++|++.+.+ . +++|+|+|+|+.. . ++ ...++| .|+|+ +++
T Consensus 238 --~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~--~---~l--~~~~~v-~f~G~~~~~~ 307 (413)
T 2x0d_A 238 --RQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD--I---AL--GKGIHL-NSLGKLTLED 307 (413)
T ss_dssp --CCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC--E---EE--ETTEEE-EEEESCCHHH
T ss_pred --cCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh--h---hc--CCcCcE-EEcCCCCHHH
Confidence 1256789999997 689999999999999864 2 3899999998742 0 11 112344 58898 577
Q ss_pred hhhhhhc
Q 009139 535 ISHRITA 541 (542)
Q Consensus 535 l~~~~~A 541 (542)
+..++.+
T Consensus 308 l~~~~~~ 314 (413)
T 2x0d_A 308 YADLLKR 314 (413)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877754
No 22
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.53 E-value=1.7e-13 Score=150.04 Aligned_cols=240 Identities=12% Similarity=0.064 Sum_probs=147.6
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHH--HHHCCCeEEEEEecCCCCCcccchhhhhcccCceeEEeecCCcee
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVA--LAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 225 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~--L~~~GheV~Vitp~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 225 (542)
..++|||++++..+.+ ||++.++..|++. +.+.||+|+|+++..... ..+...+.
T Consensus 202 ~~~~~rI~~~~~~~~~----~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~----~~~~~~~~--------------- 258 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGA----HPTGLLTVALFEALQRRQPDLQMHLFATSGDDG----STLRTRLA--------------- 258 (568)
T ss_dssp SSSCEEEEEEESCSSS----SHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCS----CHHHHHHH---------------
T ss_pred CCCCeEEEEECccccc----ChHHHHHHHHHhhccCCcccEEEEEEECCCCCc----cHHHHHHH---------------
Confidence 3568999999987644 8999999999999 788899999999643211 11111100
Q ss_pred EEEEEeeeCCeEEEEEcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCCCCCCccEEEECCCch--hH
Q 009139 226 IAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA--GL 303 (542)
Q Consensus 226 ~~~~~~~~~gv~v~~i~~p~~~~~~~~y~~~~~~~~~~~~r~~~~~~a~~~~~~~l~~~~f~~~~pDIIH~H~~~~--~~ 303 (542)
..+ .++.+ +. + ... .+.+.++. .+|||||.+..++ ..
T Consensus 259 -------~~~-~~~~~--~~--------------~--~~~-------~l~~~i~~--------~~~Div~~~~~~~~~~~ 297 (568)
T 2vsy_A 259 -------QAS-TLHDV--TA--------------L--GHL-------ATAKHIRH--------HGIDLLFDLRGWGGGGR 297 (568)
T ss_dssp -------HTS-EEEEC--TT--------------C--CHH-------HHHHHHHH--------TTCSEEEECSSCTTCSS
T ss_pred -------hcC-eEEEC--CC--------------C--CHH-------HHHHHHHh--------CCCCEEEECCCCCCcch
Confidence 011 22222 10 0 011 11222221 3799999876543 21
Q ss_pred HHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccchhHHHHHHHHHHhc
Q 009139 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 383 (542)
Q Consensus 304 ~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~l~~a 383 (542)
++.+ .. ...|+++++|+..... ++. +.. +..+
T Consensus 298 ~~~~-~~--------~~~~~~~~~~~~~~~~----------~~~--~~~---------------------------~~~~ 329 (568)
T 2vsy_A 298 PEVF-AL--------RPAPVQVNWLAYPGTS----------GAP--WMD---------------------------YVLG 329 (568)
T ss_dssp CHHH-HT--------CCSSEEEEESSSSSCC----------CCT--TCC---------------------------EEEE
T ss_pred HHHH-hc--------CCCceeEeeecCCccc----------CCC--Cce---------------------------EEEE
Confidence 2222 21 3468889988742110 110 000 0237
Q ss_pred CceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHHHHHhCCC
Q 009139 384 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP 463 (542)
Q Consensus 384 d~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~ 463 (542)
|.++++|+...+ ..+++.+|||..+.....+... +..+|+++|++
T Consensus 330 d~~i~~s~~~~~-----------------~~~~i~~ipn~~~~~~~~~~~~------------------~~~~r~~~~~~ 374 (568)
T 2vsy_A 330 DAFALPPALEPF-----------------YSEHVLRLQGAFQPSDTSRVVA------------------EPPSRTQCGLP 374 (568)
T ss_dssp CTTTSCTTTGGG-----------------CSSEEEECSSCSCCCCTTCCCC------------------CCCCTGGGTCC
T ss_pred CCCcCCcccccC-----------------CcceeEcCCCcCCCCCCCCCCC------------------CCCCccccCCC
Confidence 999999985421 1378999999543321111100 11245678885
Q ss_pred CCCCCCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEe-cCchhhHHHHHHHHHHcC---CCEEEEccCC--hhh
Q 009139 464 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG-SGDPQFESWMRDTEATYK---DKYRGWVGFN--VPI 535 (542)
Q Consensus 464 ~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG-~G~~~~~~~l~~la~~~~---~~v~~~~Gy~--~~l 535 (542)
+.++++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+.+++++++++ ++| .|+|+. +++
T Consensus 375 ---~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v-~~~g~~~~~~~ 447 (568)
T 2vsy_A 375 ---EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRL-VFMPKLPHPQY 447 (568)
T ss_dssp ---TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGE-EEECCCCHHHH
T ss_pred ---CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHE-EeeCCCCHHHH
Confidence 3456669999999 999999999999864 589999999 776 4788888888764 456 589996 477
Q ss_pred hhhhhc
Q 009139 536 SHRITA 541 (542)
Q Consensus 536 ~~~~~A 541 (542)
..++.+
T Consensus 448 ~~~~~~ 453 (568)
T 2vsy_A 448 LARYRH 453 (568)
T ss_dssp HHHGGG
T ss_pred HHHHhc
Confidence 777654
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.43 E-value=9.1e-13 Score=142.21 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=116.9
Q ss_pred CccEEEECCCchhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchh-hhhhcCCChhhhccccccccccccccccc
Q 009139 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALD 368 (542)
Q Consensus 290 ~pDIIH~H~~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~-~~~~lgl~~~~~~~l~~~~~~~~~~~~~~ 368 (542)
.+||||+|+++..+++.+++... .++|+++++|.. +|.. .+.. +|..
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~--lp~~------------------- 170 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNA--LPTY------------------- 170 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTT--STTH-------------------
T ss_pred CCCEEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhh--CccH-------------------
Confidence 56999999999888888776532 479999999985 2211 1111 1110
Q ss_pred chhHHHHHHHHHHhcCceeecChhhHHHHHhhc---cC-----CchhhhhhcCCccEEEEeCCCcCCCcCCCCccccccc
Q 009139 369 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GG-----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASH 440 (542)
Q Consensus 369 ~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~---~g-----~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~ 440 (542)
......+..+|.+...+..+.+.+.... .+ .+.-... ....++.+||||||++.|.+....
T Consensus 171 -----~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~-g~~~~v~vip~GID~~~f~~~~~~----- 239 (482)
T 1uqt_A 171 -----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAW-GKAFRTEVYPIGIEPKEIAKQAAG----- 239 (482)
T ss_dssp -----HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEET-TEEEEEEECCCCCCHHHHHHHHHS-----
T ss_pred -----HHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEEC-CeEEEEEEEeccCCHHHHHHHhcC-----
Confidence 0001112233444333333333222100 00 0000000 124679999999999888542100
Q ss_pred ccccccchhHHHHHHHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcC------CcEEEEEec-----Cch-
Q 009139 441 YSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD------DIQFVMLGS-----GDP- 508 (542)
Q Consensus 441 ~~~~d~~~k~~~k~~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~------dv~LVIvG~-----G~~- 508 (542)
.. ... +.++|++++ ++++|++|||+++.||++.+++|++++++. +++|+++|. |+.
T Consensus 240 -----~~-~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~ 307 (482)
T 1uqt_A 240 -----PL-PPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAY 307 (482)
T ss_dssp -----CC-CHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHH
T ss_pred -----cc-hHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHH
Confidence 00 011 456888876 468999999999999999999999998641 478999985 221
Q ss_pred -hhHHHHHHHHHHcC--------CCEEEEccC--ChhhhhhhhcC
Q 009139 509 -QFESWMRDTEATYK--------DKYRGWVGF--NVPISHRITAG 542 (542)
Q Consensus 509 -~~~~~l~~la~~~~--------~~v~~~~Gy--~~~l~~~~~A~ 542 (542)
.+++++++++.+.. ..++++.|+ ++++..++.++
T Consensus 308 ~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A 352 (482)
T 1uqt_A 308 QDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 352 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence 34566666665532 136666775 56787777653
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.43 E-value=6.5e-12 Score=129.96 Aligned_cols=187 Identities=13% Similarity=0.042 Sum_probs=113.5
Q ss_pred CCccEEEECCC-chhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccc
Q 009139 289 GEKCIFLVNDW-HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 367 (542)
Q Consensus 289 ~~pDIIH~H~~-~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~ 367 (542)
.+||+||+|.. ...+.+.+++. . .++|+|++.|+......+. ..+.
T Consensus 85 ~~pDvv~~~~~~~~~~~~~~~a~-~------~~ip~v~~~~~~~~~~~~~-------~~~~------------------- 131 (384)
T 1vgv_A 85 FKPDVVLVHGDTTTTLATSLAAF-Y------QRIPVGHVEAGLRTGDLYS-------PWPE------------------- 131 (384)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHH-T------TTCCEEEESCCCCCSCTTS-------STTH-------------------
T ss_pred hCCCEEEEeCCchHHHHHHHHHH-H------HCCCEEEEecccccccccC-------CCch-------------------
Confidence 38999999975 34443333332 2 5899999999762100000 0000
Q ss_pred cchhHHHHHHHH-HHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCC-cCCCcCCCCcccccccccccc
Q 009139 368 DTGEAVNVLKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDD 445 (542)
Q Consensus 368 ~~~~~~~~~k~~-l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGV-D~~~f~p~~~~~~~~~~~~~d 445 (542)
...+.. .+.+|.++++|+..++.+... | .+++++.+|+||+ |...+.+....
T Consensus 132 ------~~~~~~~~~~~d~ii~~s~~~~~~l~~~----g------~~~~~i~vi~n~~~d~~~~~~~~~~---------- 185 (384)
T 1vgv_A 132 ------EANRTLTGHLAMYHFSPTETSRQNLLRE----N------VADSRIFITGNTVIDALLWVRDQVM---------- 185 (384)
T ss_dssp ------HHHHHHHHTTCSEEEESSHHHHHHHHHT----T------CCGGGEEECCCHHHHHHHHHHHHTT----------
T ss_pred ------HhhHHHHHhhccEEEcCcHHHHHHHHHc----C------CChhhEEEeCChHHHHHHhhhhccc----------
Confidence 011222 345999999999988877541 2 3457899999995 43222110000
Q ss_pred cchhHHHHHHHHHHhC-CCCCCCCCEEEEEccCccc-cCHHHHHHHHHhhhc--CCcEEEEE-ecCchhhHHHHHHHHHH
Q 009139 446 LSGKVQCKIALQKELG-LPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEAT 520 (542)
Q Consensus 446 ~~~k~~~k~~lr~~lG-l~~~~~~~vIlfVGRl~~~-KGid~LieA~~~L~~--~dv~LVIv-G~G~~~~~~~l~~la~~ 520 (542)
.....+..+++++| ++. ++..+++++||+.++ ||++.|++|++.+.+ .+++|+++ |.++ .+.+.++++...
T Consensus 186 --~~~~~~~~~~~~~~~~~~-~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~-~~~~~l~~~~~~ 261 (384)
T 1vgv_A 186 --SSDKLRSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP-NVREPVNRILGH 261 (384)
T ss_dssp --TCHHHHHHHHTTCTTCCT-TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH-HHHHHHHHHHTT
T ss_pred --cchhhhHHHHHhccccCC-CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH-HHHHHHHHHhhc
Confidence 00011235677888 742 233578899999987 999999999999865 37898885 5443 356677766433
Q ss_pred cCCCEEEE---ccCChhhhhhhhc
Q 009139 521 YKDKYRGW---VGFNVPISHRITA 541 (542)
Q Consensus 521 ~~~~v~~~---~Gy~~~l~~~~~A 541 (542)
.++|. | +|| +++..++.+
T Consensus 262 -~~~v~-~~g~~~~-~~~~~~~~~ 282 (384)
T 1vgv_A 262 -VKNVI-LIDPQEY-LPFVWLMNH 282 (384)
T ss_dssp -CTTEE-EECCCCH-HHHHHHHHH
T ss_pred -CCCEE-EeCCCCH-HHHHHHHHh
Confidence 24664 5 566 677777654
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.38 E-value=5.6e-12 Score=129.88 Aligned_cols=127 Identities=11% Similarity=0.015 Sum_probs=81.5
Q ss_pred HhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCC-CcCCCcCCCCcccccccccccccchhHHHHHHHHHH
Q 009139 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (542)
Q Consensus 381 ~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNG-VD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~ 459 (542)
+.+|.++++|+..++.+... | .+++++.+|+|| +|...+.+.... +..++++
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~----g------~~~~~i~vi~n~~~d~~~~~~~~~~-----------------~~~~~~~ 201 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKE----N------KDESRIFITGNTAIDALKTTVKETY-----------------SHPVLEK 201 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHT----T------CCGGGEEECCCHHHHHHHHHCCSSC-----------------CCHHHHT
T ss_pred hhhheeeCCCHHHHHHHHHc----C------CCcccEEEECChhHhhhhhhhhhhh-----------------hHHHHHh
Confidence 45999999999998877541 1 346789999999 887655443100 1123444
Q ss_pred hCCCCCCCCCEEEEEccCccc-cCHHHHHHHHHhhhc--CCcEEEEEecCch-hhHHHHHHHHHHcCCCEEEEccCC--h
Q 009139 460 LGLPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDTEATYKDKYRGWVGFN--V 533 (542)
Q Consensus 460 lGl~~~~~~~vIlfVGRl~~~-KGid~LieA~~~L~~--~dv~LVIvG~G~~-~~~~~l~~la~~~~~~v~~~~Gy~--~ 533 (542)
+ + ++..+++++||+.++ ||++.|++|++.+.+ .++++++ |.|+. .+.+.++++... .++| .|+|+. +
T Consensus 202 ~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v-~~~g~~~~~ 274 (375)
T 3beo_A 202 L--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRI-HLIEPLDVI 274 (375)
T ss_dssp T--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTE-EEECCCCHH
T ss_pred c--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCE-EEeCCCCHH
Confidence 3 2 244577899999986 999999999999865 3788554 66642 334455554221 2466 465541 2
Q ss_pred hhhhhhhc
Q 009139 534 PISHRITA 541 (542)
Q Consensus 534 ~l~~~~~A 541 (542)
++..++.+
T Consensus 275 ~~~~~~~~ 282 (375)
T 3beo_A 275 DFHNVAAR 282 (375)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 66666544
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.29 E-value=2.5e-11 Score=125.41 Aligned_cols=125 Identities=10% Similarity=-0.014 Sum_probs=81.3
Q ss_pred HHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCC-cCCCcCCCCcccccccccccccchhHHHHHHHH
Q 009139 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (542)
Q Consensus 379 ~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGV-D~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr 457 (542)
..+.+|.++++|+..++.+... | .+++++.+|+|++ |...+.+ .+..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~~----g------~~~~ki~vi~n~~~d~~~~~~--------------------~~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLKE----G------KREEGILVTGQTGVDAVLLAA--------------------KLGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHTT----T------CCGGGEEECCCHHHHHHHHHH--------------------HHCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHHc----C------CCcceEEEECCchHHHHhhhh--------------------hhhHHH
Confidence 3456999999999988877642 2 3467899999975 4211100 000111
Q ss_pred HHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEE-ecCchhhHHHHHHHHHHcCCCEEEEc---cC
Q 009139 458 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWV---GF 531 (542)
Q Consensus 458 ~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIv-G~G~~~~~~~l~~la~~~~~~v~~~~---Gy 531 (542)
+++ + ++..+++++||+..+||++.|++|++.+.+ .+++++++ |+|+ .+.+.+++++.. .++|. |+ ||
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~-~~g~~g~ 265 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFV-LLDPLEY 265 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEE-EECCCCH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEE-EECCCCH
Confidence 222 1 234567789999999999999999999865 47898886 7664 246667766543 34664 66 55
Q ss_pred Chhhhhhhhc
Q 009139 532 NVPISHRITA 541 (542)
Q Consensus 532 ~~~l~~~~~A 541 (542)
. ++..++.+
T Consensus 266 ~-~~~~~~~~ 274 (376)
T 1v4v_A 266 G-SMAALMRA 274 (376)
T ss_dssp H-HHHHHHHT
T ss_pred H-HHHHHHHh
Confidence 5 67776654
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.22 E-value=4.5e-11 Score=128.52 Aligned_cols=195 Identities=14% Similarity=0.103 Sum_probs=123.9
Q ss_pred CccEEEECCCchhHHHHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccccccc
Q 009139 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (542)
Q Consensus 290 ~pDIIH~H~~~~~~~~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~~~~~ 369 (542)
.-|+|.+||+|..++|.+++... .+.++.+.+|.. +|...+.. -+|..|
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~-~Lp~~~------------------- 197 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWR-ILPKEI------------------- 197 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHT-TSCHHH-------------------
T ss_pred CCCEEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHh-hCcHhH-------------------
Confidence 45899999999999999988754 578999999976 33221100 122111
Q ss_pred hhHHHHHHHHHHhcCceeecChhhHHHHHhhccC-C-chhh-----hhhc--CCccEEEEeCCCcCCCcCCCCccccccc
Q 009139 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG-Y-GLHE-----ILSS--RKSVLNGITNGIDITEWNPSSDEHIASH 440 (542)
Q Consensus 370 ~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g-~-Gl~~-----~l~~--~~~ki~vIpNGVD~~~f~p~~~~~~~~~ 440 (542)
..-+..++..||.|..-+..+++.+...... . |+.. .+.. ...++.++|+|||++.|.+....
T Consensus 198 ---r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~----- 269 (496)
T 3t5t_A 198 ---RTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ----- 269 (496)
T ss_dssp ---HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-----
T ss_pred ---HHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-----
Confidence 1122346678999999999888775432100 0 1100 0000 12478899999999999775321
Q ss_pred ccccccchhHHHHHHHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhc--C---CcEEEEEec-----Cch--
Q 009139 441 YSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D---DIQFVMLGS-----GDP-- 508 (542)
Q Consensus 441 ~~~~d~~~k~~~k~~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~---dv~LVIvG~-----G~~-- 508 (542)
.++++|++++ ++++|++|||+++.||++.+++|+ ++++ + ++.|+++|. ++.
T Consensus 270 -----------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~ 332 (496)
T 3t5t_A 270 -----------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANA 332 (496)
T ss_dssp -----------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHH
T ss_pred -----------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHH
Confidence 1245777776 578999999999999999999999 7764 2 366888873 221
Q ss_pred hhHHHHHHHHHHcCC-----CEEEEccC--Chhhhhhhhc
Q 009139 509 QFESWMRDTEATYKD-----KYRGWVGF--NVPISHRITA 541 (542)
Q Consensus 509 ~~~~~l~~la~~~~~-----~v~~~~Gy--~~~l~~~~~A 541 (542)
.+++++++++.+.++ .| .|+|+ .+++..++.+
T Consensus 333 ~l~~~l~~lv~~in~~~g~~~V-~f~g~v~~~el~aly~~ 371 (496)
T 3t5t_A 333 DYVHRVETAVAEANAELGSDTV-RIDNDNDVNHTIACFRR 371 (496)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSE-EEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCcCE-EEeCCCCHHHHHHHHHh
Confidence 345667776655432 45 46776 4566666654
No 28
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.05 E-value=8.7e-10 Score=103.37 Aligned_cols=105 Identities=28% Similarity=0.500 Sum_probs=81.1
Q ss_pred EEeCCCcCCCcC--CCCcccccccccccccchhHHHHHHHHHHhCCCCCCCCCEEEEEccCc-cccCHHHHHHHHHhhh-
Q 009139 419 GITNGIDITEWN--PSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL- 494 (542)
Q Consensus 419 vIpNGVD~~~f~--p~~~~~~~~~~~~~d~~~k~~~k~~lr~~lGl~~~~~~~vIlfVGRl~-~~KGid~LieA~~~L~- 494 (542)
.||||||.+.|. |.... ..+.+..+|+++|++ +.++|+|+||+. +.||++.+++|++.+.
T Consensus 1 gipngvd~~~f~~~~~~~~-------------~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGS-------------RDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCSC-------------HHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhccccccccc-------------hhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 489999999998 76321 123467789999986 456999999999 9999999999999985
Q ss_pred -c--CCcEEEEEecCchhhHHHHHHHHHHcCCCEEEE-ccCCh--hhhhhhhc
Q 009139 495 -A--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW-VGFNV--PISHRITA 541 (542)
Q Consensus 495 -~--~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~-~Gy~~--~l~~~~~A 541 (542)
+ .+++|+|+|.|++.+.+.+++++++++ +|. | .|+.. ++..++.+
T Consensus 65 ~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~-~~~g~~~~~~~~~~~~~ 115 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVK-VITEMLSREFVRELYGS 115 (200)
T ss_dssp SGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEE-EECSCCCHHHHHHHHTT
T ss_pred hccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEE-EEeccCCHHHHHHHHHH
Confidence 4 379999999998666888999988887 674 7 89865 67776654
No 29
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.89 E-value=5.7e-08 Score=101.09 Aligned_cols=119 Identities=12% Similarity=-0.030 Sum_probs=82.2
Q ss_pred HHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccccchhHHHHHHH
Q 009139 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (542)
Q Consensus 377 k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~l 456 (542)
+..++.+|.|+++|+..++.+... | . + ++.+|+|+. |.+...+
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l~~~----g------~-~-ki~vi~n~~----f~~~~~~--------------------- 190 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKFKTF----G------A-K-RVFSCGNLK----FICQKGK--------------------- 190 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHTT----T------C-C-SEEECCCGG----GCCCCCS---------------------
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc----C------C-C-eEEEcCCCc----cCCCcCh---------------------
Confidence 345678999999999999887641 1 2 2 899999983 2221100
Q ss_pred HHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhc--CCcEEEEEecCchhhHHHHHHHHHHcCCC---------E
Q 009139 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK---------Y 525 (542)
Q Consensus 457 r~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~--~dv~LVIvG~G~~~~~~~l~~la~~~~~~---------v 525 (542)
++ .+ +.++++++|+ .+||++.|++|++.+.+ ++++|+|+|+|+. ..+.+++++++++-. .
T Consensus 191 ~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~~~ 261 (374)
T 2xci_A 191 GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLEGD 261 (374)
T ss_dssp CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCCSS
T ss_pred hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCCCc
Confidence 00 01 2367777776 46899999999999875 3899999999874 235677777765421 2
Q ss_pred EEEccCChhhhhhhhc
Q 009139 526 RGWVGFNVPISHRITA 541 (542)
Q Consensus 526 ~~~~Gy~~~l~~~~~A 541 (542)
+.+.|+.+++..+|.+
T Consensus 262 v~~~~~~~dl~~~y~~ 277 (374)
T 2xci_A 262 VILVDRFGILKELYPV 277 (374)
T ss_dssp EEECCSSSCHHHHGGG
T ss_pred EEEECCHHHHHHHHHh
Confidence 3577888888887764
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.61 E-value=2.8e-07 Score=95.93 Aligned_cols=67 Identities=9% Similarity=0.028 Sum_probs=44.7
Q ss_pred CCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChhhhhhhhc
Q 009139 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 467 ~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l~~~~~A 541 (542)
+..++++.|++. .|+.+.+.++++.+.+.++++++++.+.. ..+.++ +.++++ .+.||. ++..++.+
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v-~~~~~~-~~~~~l~~ 308 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANV-RLESWV-PQAALLPH 308 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTE-EEESCC-CHHHHGGG
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcE-EEeCCC-CHHHHHhc
Confidence 344667789996 88899998888887766788887765432 122222 245566 478998 66666543
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.42 E-value=1.1e-05 Score=83.57 Aligned_cols=71 Identities=10% Similarity=-0.043 Sum_probs=47.6
Q ss_pred CCCE-EEEEccCccccCHHHHHHHHHhhhcC-CcEEEE-EecCchhhHHHHHHHHHHcCCCEEEEccCChhhhhhhhc
Q 009139 467 DCPL-IGFIGRLDYQKGIDLIRLAAPEILAD-DIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 467 ~~~v-IlfVGRl~~~KGid~LieA~~~L~~~-dv~LVI-vG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l~~~~~A 541 (542)
+++. +++.|++...+.-+.++++++.+... ++++++ +|.+. .+.+++..++.+.++. +.+|.+++..++.+
T Consensus 179 ~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~---~~~~~~~~~~~~~~~~-v~~f~~dm~~~l~~ 252 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH---AEITAERYRTVAVEAD-VAPFISDMAAAYAW 252 (365)
T ss_dssp SCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT---HHHHHHHHHHTTCCCE-EESCCSCHHHHHHH
T ss_pred CCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc---cccccceecccccccc-cccchhhhhhhhcc
Confidence 4454 45557888888889999999988643 555543 45443 3445555556666664 57999998887764
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.35 E-value=2.5e-06 Score=89.36 Aligned_cols=134 Identities=10% Similarity=-0.011 Sum_probs=80.7
Q ss_pred HHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCC-CcCCCcCCCCcccccccccccccchhHHHHHHHHH
Q 009139 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (542)
Q Consensus 380 l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNG-VD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~ 458 (542)
-+.+|.++++|+..++.+.+. | .+++++.++.|. +|...+.+... ......+.++++
T Consensus 164 ~~~a~~~~~~se~~~~~l~~~----G------~~~~ki~vvGn~~~d~~~~~~~~~------------~~~~~~~~~~r~ 221 (396)
T 3dzc_A 164 AALTQYHFAPTDTSRANLLQE----N------YNAENIFVTGNTVIDALLAVREKI------------HTDMDLQATLES 221 (396)
T ss_dssp HHTCSEEEESSHHHHHHHHHT----T------CCGGGEEECCCHHHHHHHHHHHHH------------HHCHHHHHHHHH
T ss_pred HHhcCEEECCCHHHHHHHHHc----C------CCcCcEEEECCcHHHHHHHhhhhc------------ccchhhHHHHHH
Confidence 357899999999988887642 2 356789999985 45322211000 000011467888
Q ss_pred HhC-CCCCCCCCEEE-EEccCc-cccCHHHHHHHHHhhhc--CCcEEEEE-ecCchhhHHHHHHHHHHcCCCEEEEccCC
Q 009139 459 ELG-LPIRPDCPLIG-FIGRLD-YQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFN 532 (542)
Q Consensus 459 ~lG-l~~~~~~~vIl-fVGRl~-~~KGid~LieA~~~L~~--~dv~LVIv-G~G~~~~~~~l~~la~~~~~~v~~~~Gy~ 532 (542)
++| ++ +++++++ +.+|.. ..|+++.+++|++.+.+ +++++++. |.++ ...+.++++... ..++. ++++-
T Consensus 222 ~lg~l~--~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~-~~~~~l~~~~~~-~~~v~-~~~~l 296 (396)
T 3dzc_A 222 QFPMLD--ASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNP-NVREPVNKLLKG-VSNIV-LIEPQ 296 (396)
T ss_dssp TCTTCC--TTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCH-HHHHHHHHHTTT-CTTEE-EECCC
T ss_pred HhCccC--CCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCCh-HHHHHHHHHHcC-CCCEE-EeCCC
Confidence 999 44 2445544 555754 35889999999999875 47898885 6553 345555554322 24664 54432
Q ss_pred --hhhhhhhh
Q 009139 533 --VPISHRIT 540 (542)
Q Consensus 533 --~~l~~~~~ 540 (542)
.++..++.
T Consensus 297 g~~~~~~l~~ 306 (396)
T 3dzc_A 297 QYLPFVYLMD 306 (396)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 24545544
No 33
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.33 E-value=2.7e-06 Score=87.43 Aligned_cols=154 Identities=12% Similarity=0.030 Sum_probs=91.2
Q ss_pred CCccEEEECCCch--hHH-HHHHHHhcCCCCCCCCCcEEEEecCCCcCCCCchhhhhhcCCChhhhcccccccccccccc
Q 009139 289 GEKCIFLVNDWHA--GLV-PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTH 365 (542)
Q Consensus 289 ~~pDIIH~H~~~~--~~~-~~~l~~~~~~~~~~~~ipvV~TiH~~~~~g~~~~~~~~~lgl~~~~~~~l~~~~~~~~~~~ 365 (542)
.++|+|+++.+.- ..+ ..++... +. .++|+|+.+|++. |.. .....
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~l-k~----~~~k~i~~ihDl~-----pl~------~~~~~--------------- 121 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKL-KL----YDIKIVLFIHDVV-----PLM------FSGNF--------------- 121 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHH-TT----SSCEEEEEESCCH-----HHH------CGGGG---------------
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHH-Hh----cCCEEEEEecccH-----Hhh------Cccch---------------
Confidence 3789999987542 222 3334432 21 4899999999972 211 00000
Q ss_pred cccchhHHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCCCcCCCcCCCCcccccccccccc
Q 009139 366 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 445 (542)
Q Consensus 366 ~~~~~~~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNGVD~~~f~p~~~~~~~~~~~~~d 445 (542)
.....++..++.||.|+++|+.+++.+... | .+..++.++++. |.. .+. +
T Consensus 122 -----~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~~----G------~~~~ki~~~~~~-~~~--~~~-~----------- 171 (339)
T 3rhz_A 122 -----YLMDRTIAYYNKADVVVAPSQKMIDKLRDF----G------MNVSKTVVQGMW-DHP--TQA-P----------- 171 (339)
T ss_dssp -----GGHHHHHHHHTTCSEEEESCHHHHHHHHHT----T------CCCSEEEECCSC-CCC--CCC-C-----------
T ss_pred -----hhHHHHHHHHHHCCEEEECCHHHHHHHHHc----C------CCcCceeecCCC-Ccc--Ccc-c-----------
Confidence 012357888999999999999999888752 2 234566443332 211 010 0
Q ss_pred cchhHHHHHHHHHHhCCCCCCCCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCE
Q 009139 446 LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKY 525 (542)
Q Consensus 446 ~~~k~~~k~~lr~~lGl~~~~~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v 525 (542)
+....++++|+|+|++..... +..+ ..+++|+|+|+|+.. +++ +|
T Consensus 172 ----------------~~~~~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV 216 (339)
T 3rhz_A 172 ----------------MFPAGLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NV 216 (339)
T ss_dssp ----------------CCCCEEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TE
T ss_pred ----------------ccccCCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CE
Confidence 000124579999999995322 2222 258999999999852 245 66
Q ss_pred EEEccC--Chhhhhhh
Q 009139 526 RGWVGF--NVPISHRI 539 (542)
Q Consensus 526 ~~~~Gy--~~~l~~~~ 539 (542)
.|.|+ .+++..++
T Consensus 217 -~f~G~~~~~el~~~l 231 (339)
T 3rhz_A 217 -HKINYRPDEQLLMEM 231 (339)
T ss_dssp -EEEECCCHHHHHHHH
T ss_pred -EEeCCCCHHHHHHHH
Confidence 47888 44566555
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.21 E-value=2.5e-05 Score=81.85 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=31.5
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
+|||++++. | .+|-...+..|+++|+++||+|+++++..
T Consensus 7 m~kIl~~~~---~---~~Gh~~p~~~la~~L~~~G~~V~~~~~~~ 45 (430)
T 2iyf_A 7 PAHIAMFSI---A---AHGHVNPSLEVIRELVARGHRVTYAIPPV 45 (430)
T ss_dssp -CEEEEECC---S---CHHHHGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred cceEEEEeC---C---CCccccchHHHHHHHHHCCCeEEEEeCHH
Confidence 579999753 2 46777778999999999999999999753
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.21 E-value=1.8e-06 Score=89.76 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+.+|||++++.. ..|--..+..|+++|+++||+|+|+++.
T Consensus 12 ~~~~MrIl~~~~~------~~gh~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 12 RGSHMRILVIAGC------SEGFVMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp ---CCEEEEECCS------SHHHHGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred CCCceEEEEEcCC------CcchHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 3467999999852 3555566789999999999999999974
No 36
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.16 E-value=2.5e-06 Score=77.08 Aligned_cols=70 Identities=19% Similarity=0.225 Sum_probs=57.5
Q ss_pred CCEEEEEccCccccCHHHHHHHHHhhhc-CCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccC--Chhhhhhhhc
Q 009139 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPISHRITA 541 (542)
Q Consensus 468 ~~vIlfVGRl~~~KGid~LieA~~~L~~-~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy--~~~l~~~~~A 541 (542)
.++|+|+||+.++||++.+++|+..+.+ .+++|+|+|+|+. .+.+++++++++.++ .+ || ++++..++.+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~v-~~-g~~~~~~~~~~~~~ 74 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPD--EKKIKLLAQKLGVKA-EF-GFVNSNELLEILKT 74 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTT--HHHHHHHHHHHTCEE-EC-CCCCHHHHHHHHTT
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCcc--HHHHHHHHHHcCCeE-EE-eecCHHHHHHHHHh
Confidence 3689999999999999999999999854 4899999999874 688888888887655 35 88 5667776654
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.08 E-value=7.9e-05 Score=76.77 Aligned_cols=38 Identities=29% Similarity=0.333 Sum_probs=31.0
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||++++. | ..|--..+..|+++|+++||+|+++++.
T Consensus 4 M~~il~~~~---~---~~Ghv~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 4 QRHILFANV---Q---GHGHVYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEeC---C---CCcccccHHHHHHHHHhCCCEEEEEcCH
Confidence 359999874 2 3566677889999999999999999964
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.05 E-value=1.4e-05 Score=82.93 Aligned_cols=66 Identities=18% Similarity=0.159 Sum_probs=42.6
Q ss_pred CCCEEEEEccCccc-cCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChhhhhhhh
Q 009139 467 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT 540 (542)
Q Consensus 467 ~~~vIlfVGRl~~~-KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l~~~~~ 540 (542)
+..+++++|++... |+.+.+.++++.+.+.++++++++.+.. .+.++ ..++++ .+.||. +...++.
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v-~~~~~~-~~~~ll~ 298 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNV-RAVGWT-PLHTLLR 298 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTE-EEESSC-CHHHHHT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcE-EEEccC-CHHHHHh
Confidence 34566778999765 5666666666666555899999987753 22222 345676 477887 6665553
No 39
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.05 E-value=1.5e-05 Score=83.74 Aligned_cols=126 Identities=13% Similarity=0.065 Sum_probs=77.1
Q ss_pred HhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeC-CCcCCCcCCCCcccccccccccccchhHHHHHHHHHH
Q 009139 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (542)
Q Consensus 381 ~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpN-GVD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~ 459 (542)
+.+|.+++.|+..++.+.+. | .+++++.++.| ++|...+.+... .+..++++
T Consensus 168 ~~a~~~~~~se~~~~~l~~~----G------i~~~~i~vvGn~~~D~~~~~~~~~-----------------~~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLAE----G------KDPATIFVTGNTAIDALKTTVQKD-----------------YHHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHHT----T------CCGGGEEECCCHHHHHHHHHSCTT-----------------CCCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHHc----C------CCcccEEEeCCchHHHHHhhhhhh-----------------cchHHHHh
Confidence 45899999999998887652 2 35688999998 456543322210 00123344
Q ss_pred hCCCCCCCCCEEEEEccCcc-ccCHHHHHHHHHhhhc--CCcEEEEE-ecCchhhHHHHHHHHHHcCCCEEEEccCCh--
Q 009139 460 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNV-- 533 (542)
Q Consensus 460 lGl~~~~~~~vIlfVGRl~~-~KGid~LieA~~~L~~--~dv~LVIv-G~G~~~~~~~l~~la~~~~~~v~~~~Gy~~-- 533 (542)
+ + ++..+++++||... .|+++.+++|+..+.+ .++++++. |.++ ...+.+++.... ..++. ++|+..
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~-~~~~~l~~~~~~-~~~v~-l~~~l~~~ 293 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP-AVREKAMAILGG-HERIH-LIEPLDAI 293 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH-HHHHHHHHHHTT-CTTEE-EECCCCHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH-HHHHHHHHHhCC-CCCEE-EeCCCCHH
Confidence 4 2 23345566788754 4789999999999875 47898887 4443 345555553322 24664 666643
Q ss_pred hhhhhhh
Q 009139 534 PISHRIT 540 (542)
Q Consensus 534 ~l~~~~~ 540 (542)
++..++.
T Consensus 294 ~~~~l~~ 300 (403)
T 3ot5_A 294 DFHNFLR 300 (403)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655554
No 40
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.95 E-value=2.3e-05 Score=72.02 Aligned_cols=71 Identities=11% Similarity=0.051 Sum_probs=54.2
Q ss_pred CCCCEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHH----HcCCCEEEEccCChh--hhhhh
Q 009139 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA----TYKDKYRGWVGFNVP--ISHRI 539 (542)
Q Consensus 466 ~~~~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~----~~~~~v~~~~Gy~~~--l~~~~ 539 (542)
+++++|+|+||+.+.||++.+++|+..+ .+++|+|+|.|+. .+.++++++ .+.++|. |.|+..+ +..++
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~--~~~l~~~~~~~~~~l~~~v~-~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSK--GDHAERYARKIMKIAPDNVK-FLGSVSEEELIDLY 95 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCT--TSTHHHHHHHHHHHSCTTEE-EEESCCHHHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCcc--HHHHHHHHHhhhcccCCcEE-EeCCCCHHHHHHHH
Confidence 4778999999999999999999999998 5899999999874 234444444 3456774 7888544 77666
Q ss_pred hc
Q 009139 540 TA 541 (542)
Q Consensus 540 ~A 541 (542)
.+
T Consensus 96 ~~ 97 (177)
T 2f9f_A 96 SR 97 (177)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 41
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=97.86 E-value=0.0003 Score=73.04 Aligned_cols=40 Identities=28% Similarity=0.316 Sum_probs=31.9
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+.+|||++++. | ..|--.-+..|+++|+++||+|+++++.
T Consensus 18 ~~m~rIl~~~~---~---~~GHv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 18 RHMAHLLIVNV---A---SHGLILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp -CCCEEEEECC---S---CHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred ccCCEEEEEeC---C---CccccccHHHHHHHHHHCCCEEEEEeCH
Confidence 35799999874 2 3566667788999999999999999954
No 42
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.66 E-value=9.3e-05 Score=77.21 Aligned_cols=105 Identities=8% Similarity=0.024 Sum_probs=66.6
Q ss_pred HhcCceeecChhhHHHHHhhccCCchhhhhhcCCccEEEEeCC-CcCCCcCCCCcccccccccccccchhHHHHHHHHHH
Q 009139 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (542)
Q Consensus 381 ~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~ki~vIpNG-VD~~~f~p~~~~~~~~~~~~~d~~~k~~~k~~lr~~ 459 (542)
+.+|.+++.++..++.+.+. | .+++++.++.|. +|...+.. ....+..++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~~----G------~~~~~I~vtGnp~~D~~~~~~-----------------~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIAE----G------LPAELTFKSGSHMPEVLDRFM-----------------PKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHHT----T------CCGGGEEECCCSHHHHHHHHH-----------------HHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHHc----C------CCcCcEEEECCchHHHHHHhh-----------------hhcchhHHHHH
Confidence 46899999999988887652 2 356789998884 44311100 01234567889
Q ss_pred hCCCCCCCCCEEEEEccCc---cccCHHHHHHHHHhhhcC-CcEEEEEecCchhhHHHHHH
Q 009139 460 LGLPIRPDCPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRD 516 (542)
Q Consensus 460 lGl~~~~~~~vIlfVGRl~---~~KGid~LieA~~~L~~~-dv~LVIvG~G~~~~~~~l~~ 516 (542)
+|++. +..++++.+|.. ..|++..+++|+.++.+. ++++|+.. ++ ...+.+++
T Consensus 198 lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~-~p-~~~~~l~~ 254 (385)
T 4hwg_A 198 LSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFST-HP-RTKKRLED 254 (385)
T ss_dssp TTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEE-CH-HHHHHHHT
T ss_pred cCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEEC-Ch-HHHHHHHH
Confidence 99862 344555677754 458899999999998653 67777654 33 24444444
No 43
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=97.50 E-value=0.00014 Score=74.91 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=30.6
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||++++.. ..|--..+..|+++|+++||+|+|+++.
T Consensus 1 ~MrIl~~~~~------~~gh~~~~~~la~~L~~~GheV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLP------YPTHLMAMVPLCWALQASGHEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCS------CHHHHHTTHHHHHHHHHTTCEEEEEECH
T ss_pred CcEEEEEcCC------CcchhhhHHHHHHHHHHCCCEEEEecCh
Confidence 3999999853 3555556788999999999999999864
No 44
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.36 E-value=0.0025 Score=65.27 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=31.5
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++++. + .+|-...+..|+++|+++||+|+++++.
T Consensus 1 MrIl~~~~---~---~~Gh~~p~~~la~~L~~~Gh~V~~~~~~ 37 (384)
T 2p6p_A 1 MRILFVAA---G---SPATVFALAPLATAARNAGHQVVMAANQ 37 (384)
T ss_dssp CEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CEEEEEeC---C---ccchHhHHHHHHHHHHHCCCEEEEEeCH
Confidence 89999864 2 4777788889999999999999999865
No 45
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=96.22 E-value=0.02 Score=64.31 Aligned_cols=167 Identities=18% Similarity=0.159 Sum_probs=106.3
Q ss_pred HHHHHHHHHHhcCceeecChhhHHHHHhhccCCchhhhhhcCCc-cEEEEeCCCcCCCcCCCCcccc----ccccc----
Q 009139 372 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS-VLNGITNGIDITEWNPSSDEHI----ASHYS---- 442 (542)
Q Consensus 372 ~~~~~k~~l~~ad~Vi~vS~~~~~~l~~~~~g~Gl~~~l~~~~~-ki~vIpNGVD~~~f~p~~~~~~----~~~~~---- 442 (542)
.++|...++..+..|-.||.-..+-+.+..+ ..+....++ |+.-+.|||...+|--...+.+ ....+
T Consensus 467 ~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f----~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~ 542 (879)
T 1ygp_A 467 QIRMAFLAIVGSHKVNGVVELHSELIKTTIF----KDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTE 542 (879)
T ss_dssp EEEHHHHHHHHEEEEEESSHHHHHHHHHTTT----HHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTC
T ss_pred eeehHHHHHHhcCceeEehHHHHHHHHHHHh----HHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChh
Confidence 4677888999999999999877666644221 112222356 9999999998777742211111 00001
Q ss_pred ---------------ccc--c-----chhHHHHHH----HHHHh-CCCCC-----CCCCEEEEEccCccccCHHH-HHHH
Q 009139 443 ---------------IDD--L-----SGKVQCKIA----LQKEL-GLPIR-----PDCPLIGFIGRLDYQKGIDL-IRLA 489 (542)
Q Consensus 443 ---------------~~d--~-----~~k~~~k~~----lr~~l-Gl~~~-----~~~~vIlfVGRl~~~KGid~-LieA 489 (542)
++| + ..|...|.+ ++++. |+..+ ++...++++-|+..+|.+.+ ++..
T Consensus 543 ~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~i 622 (879)
T 1ygp_A 543 EYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGI 622 (879)
T ss_dssp GGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHH
T ss_pred hhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHH
Confidence 122 1 123333433 45677 88777 78899999999999999999 5666
Q ss_pred HHhh---h-c--------------CCcEEEEEecCchhh------HHHHHHHHH------HcCC--CEEEEccCChhhhh
Q 009139 490 APEI---L-A--------------DDIQFVMLGSGDPQF------ESWMRDTEA------TYKD--KYRGWVGFNVPISH 537 (542)
Q Consensus 490 ~~~L---~-~--------------~dv~LVIvG~G~~~~------~~~l~~la~------~~~~--~v~~~~Gy~~~l~~ 537 (542)
+.++ + . .++++|+.|+..+.| ...+...++ +..+ +|++.-.|+..+++
T Consensus 623 i~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe 702 (879)
T 1ygp_A 623 IYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAE 702 (879)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHH
T ss_pred HHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHH
Confidence 5543 2 1 368999999865422 233333443 1334 78777799999999
Q ss_pred hhhcC
Q 009139 538 RITAG 542 (542)
Q Consensus 538 ~~~A~ 542 (542)
+|..|
T Consensus 703 ~iipa 707 (879)
T 1ygp_A 703 IIIPA 707 (879)
T ss_dssp HHGGG
T ss_pred Hhhhh
Confidence 98754
No 46
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=95.58 E-value=0.027 Score=58.39 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=29.7
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++++.. +.|--.-+..|+++|+++||+|+|+++.
T Consensus 1 MrIli~~~g------t~Ghv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 1 MGVLITGCG------SRGDTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp -CEEEEEES------SHHHHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred CeEEEEeCC------CCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 899998853 3555566788999999999999999965
No 47
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=90.52 E-value=0.21 Score=50.88 Aligned_cols=40 Identities=28% Similarity=0.174 Sum_probs=29.6
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
-+.|||++++. | ..|==.-+..|+++|+++||+|+++++.
T Consensus 20 ~~~MRIL~~~~---p---~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 20 FQSMRALFITS---P---GLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp -CCCEEEEECC---S---SHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCeEEEECC---C---chhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 35799998863 2 2333334578999999999999999964
No 48
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=84.62 E-value=0.9 Score=46.72 Aligned_cols=39 Identities=28% Similarity=0.340 Sum_probs=31.8
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
++|||++++. | ..|--.-+..|+++|+++||+|+++++.
T Consensus 11 ~~~~Il~~~~---~---~~GHv~p~l~la~~L~~~Gh~V~~~~~~ 49 (424)
T 2iya_A 11 TPRHISFFNI---P---GHGHVNPSLGIVQELVARGHRVSYAITD 49 (424)
T ss_dssp CCCEEEEECC---S---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred ccceEEEEeC---C---CCcccchHHHHHHHHHHCCCeEEEEeCH
Confidence 3689999753 2 3666777899999999999999999965
No 49
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=80.66 E-value=1.1 Score=46.35 Aligned_cols=39 Identities=26% Similarity=0.209 Sum_probs=31.0
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|||++++. | .+|--.-+..|+++|+++||+|+++++.
T Consensus 19 ~~mrIl~~~~---~---~~GHv~p~l~la~~L~~~GheV~~~~~~ 57 (441)
T 2yjn_A 19 SHMRVVFSSM---A---SKSHLFGLVPLAWAFRAAGHEVRVVASP 57 (441)
T ss_dssp CCCEEEEECC---S---CHHHHTTTHHHHHHHHHTTCEEEEEECG
T ss_pred CccEEEEEcC---C---CcchHhHHHHHHHHHHHCCCeEEEEeCc
Confidence 4699999853 2 3555556789999999999999999964
No 50
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=80.44 E-value=1.5 Score=44.94 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=30.9
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++++. | .+|=-.-+..|+++|+++||+|+++++.
T Consensus 1 MrIl~~~~---~---~~GH~~p~l~la~~L~~~Gh~V~~~~~~ 37 (416)
T 1rrv_A 1 MRVLLSVC---G---TRGDVEIGVALADRLKALGVQTRMCAPP 37 (416)
T ss_dssp CEEEEEEE---S---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEec---C---CCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 89999863 2 4676777889999999999999999865
No 51
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=78.66 E-value=1.9 Score=44.26 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=30.9
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++++. | .+|=-.-+..|+++|+++||+|+++++.
T Consensus 1 M~Il~~~~---~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 1 MRVLLATC---G---SRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp CEEEEECC---S---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEcC---C---CchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 89998753 2 4677777889999999999999999865
No 52
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=74.62 E-value=2.7 Score=40.87 Aligned_cols=33 Identities=36% Similarity=0.569 Sum_probs=27.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++ | ||.|-.=..|++.|.++||+|++++.+
T Consensus 1 MkILV-T---------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV-G---------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE-E---------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 89875 3 666667788999999999999999854
No 53
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=67.15 E-value=6.6 Score=33.80 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=31.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++... ..|-.+.++..+++.|.+.|++|.++...
T Consensus 1 M~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4688887643 46999999999999999999999998654
No 54
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=66.04 E-value=9.7 Score=32.42 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=31.2
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeE-EEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV-~Vitp~ 194 (542)
||++++... .||. .-......+++.++.+.||+| .|+.-.
T Consensus 1 mk~~iiv~~-~p~~--~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINE-GPYQ--HQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTTT--STHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeC-CCCC--cHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 789988764 5642 455677899999999999999 888743
No 55
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=64.53 E-value=11 Score=32.78 Aligned_cols=41 Identities=22% Similarity=0.200 Sum_probs=32.8
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeE-EEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV-~Vitp 193 (542)
..|||+++... +||. .-......+++.++.+.||+| .|+--
T Consensus 11 ~~~~~~ivv~~-~Pyg--~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 11 GSMRFAIVVTG-PAYG--TQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CCCEEEEEECS-CSSS--SSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CceEEEEEEcC-CCCC--cHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 57999998865 5753 556677799999999999999 88863
No 56
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=63.81 E-value=8.1 Score=34.15 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=31.3
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++... .+|..+.++..+++.|.+.|++|.++-..
T Consensus 1 Mkv~IvY~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLS-----DYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECT-----TSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEEC-----CChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 788888643 36999999999999999999999888643
No 57
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=62.86 E-value=7.1 Score=37.86 Aligned_cols=40 Identities=20% Similarity=0.166 Sum_probs=28.9
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
.++||||+...+ |=.+.-+..|.++|.+ +|+|+|++|...
T Consensus 9 ~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 9 TPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp --CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 356999987654 2233457889999987 799999999753
No 58
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=60.99 E-value=8.1 Score=36.71 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCCceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+..|||+.|+.. .||+| +.+.+||.+|+++|.+|.+|-..
T Consensus 2 ~~~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 2 LRAKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp ---CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 3456788777642 37666 67789999999999999999644
No 59
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=59.11 E-value=13 Score=36.48 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=28.6
Q ss_pred CCceEEEEEecccCCCcCCChH-hHHHhHHHHHHHHCCCeEEEEEe
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl-~~~v~~La~~L~~~GheV~Vitp 193 (542)
-.+||||+|... |. .++. ........++|.+.||+|+++-.
T Consensus 20 m~~MKiLII~aH--P~--~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAH--PE--PRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeC--CC--CccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 357999999876 53 2443 34456677888899999999854
No 60
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=57.88 E-value=21 Score=35.04 Aligned_cols=76 Identities=17% Similarity=0.107 Sum_probs=46.8
Q ss_pred HHHHHHHHhCCCCCCCCC-EEEEEcc-CccccCH--HHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcC----C
Q 009139 452 CKIALQKELGLPIRPDCP-LIGFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----D 523 (542)
Q Consensus 452 ~k~~lr~~lGl~~~~~~~-vIlfVGR-l~~~KGi--d~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~----~ 523 (542)
.++.+++.+|+.. +++ +++..|. ..+.|.. +.+.+++..|.+.++++++.|...+ .+..+++.+..+ .
T Consensus 166 ~~~~~~~~~~~~~--~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e--~~~~~~i~~~~~~~~~~ 241 (348)
T 1psw_A 166 EKSYTCNQFSLSS--ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCS--SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhCCCC--CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhh--HHHHHHHHHhhhhcccc
Confidence 3556778888742 344 4555665 6566765 4888888888766899999885432 344444443322 2
Q ss_pred CEEEEccC
Q 009139 524 KYRGWVGF 531 (542)
Q Consensus 524 ~v~~~~Gy 531 (542)
+++.+.|.
T Consensus 242 ~~~~l~g~ 249 (348)
T 1psw_A 242 WCRNLAGE 249 (348)
T ss_dssp TEEECTTT
T ss_pred ceEeccCc
Confidence 45555564
No 61
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=57.88 E-value=7.1 Score=37.19 Aligned_cols=42 Identities=17% Similarity=0.339 Sum_probs=28.9
Q ss_pred ccCCCceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 146 AQTRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 146 ~~~~~~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+.+.+|||+.|+.. .||+| +.+.+|+.+|+ +|.+|.+|=..
T Consensus 21 ~~~~~~~~vI~v~s~------kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 21 SMDNKKPKIITIASI------KGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -----CCEEEEECCS------SSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred cCCCCCCeEEEEEeC------CCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 455567888877752 36665 66788999999 99999999654
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=57.39 E-value=9.6 Score=36.72 Aligned_cols=38 Identities=29% Similarity=0.363 Sum_probs=28.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
+||||+.... |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 1 MPTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEECCC-------CCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 4999987654 223445889999999988 9999999753
No 63
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=56.70 E-value=11 Score=39.60 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=31.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+||+++.. | ..|=-.-+..|++.|+++||+|+++++.
T Consensus 8 ~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468988863 3 3666677899999999999999999875
No 64
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=56.65 E-value=14 Score=33.20 Aligned_cols=40 Identities=10% Similarity=0.147 Sum_probs=33.0
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHH-CCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~-~GheV~Vitp~ 194 (542)
.+|||++|... ..|-.+.++..+++.|.+ .|++|.++...
T Consensus 3 ~M~kiliiy~S-----~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 3 AMGKVLVIYDT-----RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CCEEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCCEEEEEEEC-----CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 46899998753 358899999999999998 89999998654
No 65
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=56.12 E-value=9 Score=40.33 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=30.8
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CCeEEEEEecC
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRY 195 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-GheV~Vitp~~ 195 (542)
++|+|++++. | ..|=-.-+..|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4578888863 2 355556688999999998 99999998764
No 66
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=54.28 E-value=14 Score=31.66 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=31.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++... ..|-.+.++..+++.|.+.|++|.++...
T Consensus 1 mki~iiy~S-----~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS-----TTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC-----CcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 788887532 35889999999999999999999988643
No 67
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=53.23 E-value=13 Score=33.62 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=25.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++.. .|++| ..+++.|.++|++|++++..
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78876542 37766 56788899999999999754
No 68
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=52.35 E-value=25 Score=31.01 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=28.5
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEE
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vit 192 (542)
++..||++++.. +| +.--.--.+..++..|.++||+|+|-.
T Consensus 3 ~~~~m~~LilLG--CP--E~Pvq~p~~lYl~~~Lk~~G~~v~VA~ 43 (157)
T 1kjn_A 3 TESTGKALMVLG--CP--ESPVQIPLAIYTSHKLKKKGFRVTVTA 43 (157)
T ss_dssp ---CCEEEEECC--CS--CSTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccceeeeEEec--CC--CCcchhhHHHHHHHHHHhcCCeeEEec
Confidence 456799988853 23 223345567889999999999999986
No 69
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=52.28 E-value=20 Score=32.69 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=33.3
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|||++|... | .|-...++..+++.+.+.|++|.++-..
T Consensus 5 ~mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 46899999753 4 4888999999999999999999998754
No 70
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=51.70 E-value=19 Score=29.35 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=30.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CC-eEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GH-RVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-Gh-eV~Vitp~ 194 (542)
||++++... .|+. .-.......++.++.+. || +|.|+.-.
T Consensus 2 ~k~~ii~~~-~p~~--~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APYG--SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTTT--CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCCC--cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 588888764 5642 34455678999999999 99 99999744
No 71
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=51.38 E-value=21 Score=32.09 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+|||++|... | .|-...++..+++.+.+.|++|.++-.
T Consensus 5 M~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4699998754 4 588899999999999999999999864
No 72
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=51.03 E-value=15 Score=33.44 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=24.8
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++.. .|++| ..+++.|.++|++|.+++..
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 78776542 36666 67788899999999999754
No 73
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=50.60 E-value=19 Score=32.29 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=31.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHH-CCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~-~GheV~Vitp~ 194 (542)
+|||++|... | .|-...++..+++.+.+ .|++|.++-..
T Consensus 1 Mmkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 4799998754 3 58889999999999998 89999999754
No 74
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=49.12 E-value=27 Score=30.66 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=31.7
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..||+++... ..|..+.++..+++.|.+.|++|.++-..
T Consensus 4 ~~kv~IvY~S-----~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYVS-----EYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEECT-----TSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEEC-----CChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 3477777542 36999999999999999999999988654
No 75
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=48.82 E-value=16 Score=35.07 Aligned_cols=37 Identities=22% Similarity=0.204 Sum_probs=28.2
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
||||+.... |=.+.-+..|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (244)
T 2e6c_A 1 MRILVTNDD-------GIYSPGLWALAEAASQFG-EVFVAAPDTE 37 (244)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEECSS
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899876654 223345888999999888 9999999753
No 76
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=48.60 E-value=18 Score=33.49 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=25.5
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..|+|++... .||+| ..+++.|.++||+|.+++..
T Consensus 20 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGA-------NGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECC-------CChHH---HHHHHHHHhCCCeEEEEECC
Confidence 3578876542 47777 56778889999999999754
No 77
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=48.41 E-value=17 Score=31.25 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=30.0
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEE
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vit 192 (542)
+|||+++.. +.+|-.+.+...+++.|.+.|++|.++.
T Consensus 1 M~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 357777643 2479999999999999999999998773
No 78
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=47.47 E-value=17 Score=34.85 Aligned_cols=37 Identities=22% Similarity=0.185 Sum_probs=28.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
||||+.... |=.+.-+..|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (247)
T 1j9j_A 1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKE 37 (247)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899876654 223345888999999888 9999999753
No 79
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=47.11 E-value=20 Score=32.66 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=25.0
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHH-HCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA-ARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~-~~GheV~Vitp~ 194 (542)
.+||.++|+- ..||+| ..+++.|. +.||+|.++...
T Consensus 3 ~mmk~vlVtG------asg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 3 AMYXYITILG------AAGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSCSEEEEES------TTSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred ceEEEEEEEe------CCcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 3578455552 247776 56777888 899999998754
No 80
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=46.78 E-value=12 Score=33.18 Aligned_cols=40 Identities=25% Similarity=0.236 Sum_probs=29.3
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|||+++... .+|..+.+...+++.|.+.|++|.++...
T Consensus 8 ~~~ki~I~Y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 8 EMPGITIISAS-----QTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp ----CEEEEEC-----SSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCCeEEEEEEC-----CchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 45677776432 46999999999999999999999887643
No 81
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=46.21 E-value=29 Score=29.57 Aligned_cols=42 Identities=12% Similarity=-0.090 Sum_probs=31.4
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..+|+++|... .|+. ..-......++.+.++.||+|.|+...
T Consensus 14 ~~~kl~ii~~s-gP~~--~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 14 QXXXILIVVTH-GPED--LDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCCEEEEEECC-CGGG--THHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccceEEEEEcc-CCCC--HHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45688888765 4542 556667788888888999999998744
No 82
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=45.32 E-value=21 Score=34.85 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=25.4
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|||++... .|++| ..|++.|.++||+|++++..
T Consensus 12 ~~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 4588876542 36665 66788888999999998754
No 83
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.01 E-value=22 Score=33.19 Aligned_cols=35 Identities=23% Similarity=0.064 Sum_probs=28.4
Q ss_pred eEEEEEecccCCCcCCChHhHH--HhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~--v~~La~~L~~~GheV~Vitp~ 194 (542)
+||++..+ ||.+.+ ..+|.+.|.+.|++|.||...
T Consensus 6 k~IllgiT--------Gsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 6 KRIGFGFT--------GSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp CEEEEEEC--------SCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEE--------ChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 57876542 666777 789999999999999999865
No 84
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=44.77 E-value=18 Score=31.46 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=37.8
Q ss_pred CCCEEEEEccCc---cccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChh
Q 009139 467 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 534 (542)
Q Consensus 467 ~~~vIlfVGRl~---~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~ 534 (542)
...+++++|++. +.|.+..+++|+..+ ++++++++.+.. .+ .+++++. +.||...
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~--~~-------~~~~~v~-~~~~~~~ 78 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNK--PD-------TLGLNTR-LYKWIPQ 78 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSC--CT-------TCCTTEE-EESSCCH
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcC--cc-------cCCCcEE-EecCCCH
Confidence 345788899996 788899999988664 578888876542 11 2455664 6788543
No 85
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=44.52 E-value=19 Score=35.89 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=19.5
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..+++.|.++|++|.++...
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 36666 66788899999999998754
No 86
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=44.52 E-value=19 Score=35.14 Aligned_cols=37 Identities=22% Similarity=0.120 Sum_probs=28.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
||||+.... |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~ 37 (280)
T 1l5x_A 1 MKILVTNDD-------GVHSPGLRLLYQFALSLG-DVDVVAPESP 37 (280)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHGGGS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899876654 223345888999999888 9999999753
No 87
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=44.14 E-value=22 Score=33.70 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=29.9
Q ss_pred CCceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+.+|||+.|+.. .||+| +.+.+|+.+|+++|.+|.+|=..
T Consensus 15 ~~~~~vI~v~s~------kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 15 GKIKSRIAVMSG------KGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TTCSCEEEEECS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccCCeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 345677766642 36666 57789999999999999999654
No 88
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=43.95 E-value=22 Score=34.31 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=28.3
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
.||||+...+ |=.+.-+..|+++|.+.| +|+|++|...
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~ 38 (254)
T 2v4n_A 1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRN 38 (254)
T ss_dssp CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCC
Confidence 4899976654 223345788999998876 9999999753
No 89
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=43.92 E-value=21 Score=33.09 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=23.3
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||.++||- ..||++ ..+++.|.++|++|.++...
T Consensus 1 Mk~vlVtG------asg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITG------SASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeC------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 55555652 246666 56788899999999988643
No 90
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=43.20 E-value=22 Score=33.29 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=25.3
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||+++||- ..||++ ..+++.|+++|++|.++..+
T Consensus 1 mk~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISG------CATGIG---AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777774 247777 56788899999999888643
No 91
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=42.95 E-value=17 Score=33.65 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=24.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCC-CeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~G-heV~Vitp~ 194 (542)
+||.++|+- ..||++ ..+++.|.++| ++|.++...
T Consensus 22 ~mk~vlVtG------atG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILG------AGGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEET------TTSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEe------CCcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 456555652 247776 56788999999 899988754
No 92
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=42.74 E-value=18 Score=32.92 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=25.2
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++.. .|++| ..+++.|.++|++|.+++..
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78876542 36666 67788999999999999754
No 93
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=41.59 E-value=27 Score=31.32 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=31.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||++|... .|-...++..+++.+.+.|++|.++-..
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 5899998753 4888889999999999899999998654
No 94
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=41.41 E-value=24 Score=31.57 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=23.9
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|||++... .||++ ..+++.|. +|++|.++...
T Consensus 2 ~kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 3578765432 47766 56788888 89999988643
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=40.95 E-value=23 Score=32.76 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=28.6
Q ss_pred ceEEEEEecccCCCcCCChHhHH--HhHHHHHHHHCCCeEEEEEecC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~--v~~La~~L~~~GheV~Vitp~~ 195 (542)
.+||++-. +|+.+.+ ..+|.+.|.+.|++|.|+....
T Consensus 7 ~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 7 GKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp TCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 35777654 2666665 9999999999999999998653
No 96
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=40.92 E-value=38 Score=27.96 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=29.0
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
..+.|||++++.. .......+..+-++..++|.+|.+..-.+
T Consensus 3 ~~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~ 44 (108)
T 3nbm_A 3 ASKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAY 44 (108)
T ss_dssp --CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEET
T ss_pred cccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcch
Confidence 3468999999962 24455566666677777899999987444
No 97
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=40.53 E-value=21 Score=32.92 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=24.4
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||+++||- ..||+| ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITG------ASSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEES------TTSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEec------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 77777774 247777 57788999999998888643
No 98
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=40.05 E-value=61 Score=30.19 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=32.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
.|+|+++...- ...-|+.....+.-..+.+.||+|+++....
T Consensus 1 smricifmarg---legcgvtkfsleqrdwfiknghevtlvyakd 42 (401)
T 1xv5_A 1 SMRICIFMARG---LEGCGVTKFSLEQRDWFIKNGHEVTLVYAKD 42 (401)
T ss_dssp CCEEEEEETTC---CCSSHHHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CceEEEEeecc---ccccCceeeehhhhhhhhcCCcEEEEEEecc
Confidence 48999987642 2345777777777888999999999997653
No 99
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.69 E-value=32 Score=28.40 Aligned_cols=33 Identities=21% Similarity=0.482 Sum_probs=23.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||+++.. |.++ ..+++.|.+.|++|+++...
T Consensus 4 ~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 488887742 4444 56788899999999998643
No 100
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=39.04 E-value=49 Score=32.21 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=31.1
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
...+|||++|... |. +.|=....+..+++.+.+.|++|.++-..
T Consensus 55 ~~~~mKILiI~GS--~R-~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 55 DAPPVRILLLYGS--LR-ARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CCSCCEEEEEESC--CS-SSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCCEEEEEEeC--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 3567999999864 42 22334556666788888889999998643
No 101
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=38.29 E-value=42 Score=30.26 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=31.3
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHH-HHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVA-LAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~-L~~~GheV~Vitp~ 194 (542)
+|||++|... |. +.|-...++..+++. |.+.|++|.++-..
T Consensus 2 Mmkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 2 TYSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp CEEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred CceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 5799998754 42 246677888888888 88899999998643
No 102
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=37.27 E-value=25 Score=32.44 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=27.4
Q ss_pred eEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++ +. .||+| +.+.+||..|+++|++|.+|=..
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 78887 53 26665 56788999999999999999654
No 103
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.88 E-value=31 Score=31.57 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=20.0
Q ss_pred hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 171 GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 171 ~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+.+-..+++.|.+.||+|+++..+
T Consensus 9 G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 9 ETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CHHHHHHHHHHHhCCCeEEEEECC
Confidence 456678999999999999999743
No 104
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=36.80 E-value=42 Score=30.78 Aligned_cols=37 Identities=32% Similarity=0.510 Sum_probs=28.0
Q ss_pred eEEEEEecccCCCcCCChH--hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl--~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||++.|+.. .||+ .+.+..|+.+|+++|.+|.+|-..
T Consensus 2 ~~~i~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSG------KGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecC------CCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 466666642 2554 467889999999999999999754
No 105
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=36.49 E-value=42 Score=29.92 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=28.6
Q ss_pred eEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+.|+.. .||+| +.+.+|+..|+++|.+|.+|-..
T Consensus 1 M~vi~v~s~------kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP------KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 788777752 35554 56789999999999999999654
No 106
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=36.10 E-value=22 Score=32.61 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=28.3
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+|||++|... |. .++ ......+++++.+.|++|.++-.
T Consensus 1 MmkiLiI~gs--p~--~~~-s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILAH--PN--ISQ-STVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEECC--TT--GGG-CSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CCEEEEEEeC--CC--ccH-HHHHHHHHHHHHhCCCeEEEEEc
Confidence 5899999864 52 233 36778888888889999999964
No 107
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=35.98 E-value=39 Score=31.68 Aligned_cols=37 Identities=32% Similarity=0.471 Sum_probs=27.5
Q ss_pred eEEEEEecccCCCcCCCh--HhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGG--LGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GG--l~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+.|+.. .|| -.+.+.+|+.+|+++|++|.+|-..
T Consensus 2 ~~~I~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG------KGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES------SSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC------CCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 466666542 254 4567899999999999999999654
No 108
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=35.39 E-value=34 Score=32.07 Aligned_cols=36 Identities=14% Similarity=0.247 Sum_probs=25.8
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+.|+++||- ..||+| ..+++.|+++|++|.++...
T Consensus 20 ~m~k~vlITG------as~gIG---~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLG------GSGALG---AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3447777774 247776 67889999999998888754
No 109
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=35.37 E-value=31 Score=31.47 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=31.5
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||+++... .+|..+.+...|++.|.+.|++|.++...
T Consensus 21 ~~kv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYGS-----NMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEEC-----CChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 4677766432 57999999999999999999999987654
No 110
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=35.32 E-value=24 Score=36.72 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=31.6
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC--CCeEEEEEecC
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 195 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~--GheV~Vitp~~ 195 (542)
.+++|+++.. | ..|=-.-+.+|++.|+++ ||+|+++++..
T Consensus 8 ~~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 8 KNSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp HCEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 4579998863 3 355556788999999999 99999998764
No 111
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.26 E-value=39 Score=29.92 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=24.4
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+|+++.. .|+++ ..+++.|.++|++|.+++..
T Consensus 4 ~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 67776542 36665 67788899999999998754
No 112
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=35.21 E-value=39 Score=32.11 Aligned_cols=32 Identities=28% Similarity=0.564 Sum_probs=23.6
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
|.++|+- ..||++ ..+++.|+++|++|.++..
T Consensus 33 k~vlVTG------asggIG---~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTG------ASGGIG---AAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEEC
Confidence 5666663 247776 5678889999999988864
No 113
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=35.13 E-value=49 Score=27.49 Aligned_cols=39 Identities=23% Similarity=0.146 Sum_probs=29.1
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|++++... .||. .-...-..+++.++.+.||+|.|+-..
T Consensus 3 k~~~vv~~-~P~g--~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 3 RIAFVFST-APHG--TAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CEEEEECS-CTTT--STHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEEcC-CCCC--cHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 58887764 5752 334566789999999999999999744
No 114
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=34.53 E-value=35 Score=30.88 Aligned_cols=33 Identities=36% Similarity=0.607 Sum_probs=23.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+++.. .|.++ ..+++.|.+.||+|.++...
T Consensus 1 m~i~iiGa-------~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67776531 24444 56788899999999988643
No 115
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=34.37 E-value=46 Score=26.46 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=23.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCC-CeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~G-heV~Vitp~ 194 (542)
+|+|+++. .|+++ ..+++.|.+.| ++|.++...
T Consensus 5 ~~~v~I~G--------~G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG--------AGKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC--------CSHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC--------CCHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 46777664 16655 56777888999 898887643
No 116
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=34.25 E-value=37 Score=32.92 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=24.4
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+.|||++... .|++| ..|++.|.++||+|+++...
T Consensus 12 ~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVTGI-------TGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 45678876432 36666 56788889999999998754
No 117
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=34.13 E-value=42 Score=28.82 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=30.6
Q ss_pred ce-EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SY-NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~M-kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.| ||+++... .||. .-......+++.++.+.||+|.|+.-.
T Consensus 4 ~Mkk~~ivv~~-~P~g--~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 4 VVKKFMYLNRK-APYG--TIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp -CCEEEEEECS-CTTT--SSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred chhEEEEEEeC-CCCC--cHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 36 58888754 6752 346667899999999999999999743
No 118
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=34.09 E-value=35 Score=34.39 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=24.1
Q ss_pred CccCcccccCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 139 DVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 139 ~~~~~~~~~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
++....++.....++|++|... ..| ..+|..|+++|++|+|+=.
T Consensus 11 ~~~~~~~~~~~~~~dV~IVGaG------~aG-----l~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 11 HHSSGENLYFQGHMKAIVIGAG------IGG-----LSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ------------CCEEEEECCS------HHH-----HHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCcccCCCCCEEEEECCC------HHH-----HHHHHHHHhCCCCEEEEeC
Confidence 3444444445567899998742 122 4567888999999999954
No 119
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=33.16 E-value=43 Score=32.43 Aligned_cols=40 Identities=23% Similarity=0.406 Sum_probs=26.3
Q ss_pred ccccCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 144 DKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 144 ~~~~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+++|..+++||++|.. |.++ ..++..|++.||+|+++...
T Consensus 8 ~~~~~~~~~~I~VIG~--------G~mG---~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 8 ASAKKIIVKHVTVIGG--------GLMG---AGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp ----CCCCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred cccccccCCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 4455555678998863 5554 45788888999999988643
No 120
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=33.14 E-value=37 Score=31.23 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=25.7
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||+++||- ..||++ ..+++.|+++|++|.++...
T Consensus 2 ~k~vlITG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITG------ASRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEES------CSSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777774 247777 57889999999998887643
No 121
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=33.08 E-value=27 Score=34.74 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=23.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEE
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vi 191 (542)
.|||++|... | .| ..+|..|+++|++|+|+
T Consensus 1 sm~V~IVGaG--p----aG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAG--I----GG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCS--H----HH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcC--H----HH-----HHHHHHHHhCCCCEEEE
Confidence 4899998742 1 33 55778899999999999
No 122
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.90 E-value=31 Score=33.38 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=24.9
Q ss_pred ccCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-----C-CeEEEEEe
Q 009139 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-----G-HRVMVVSP 193 (542)
Q Consensus 146 ~~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-----G-heV~Vitp 193 (542)
+|...+|||++|.. |.++. .++..|++. | |+|+++..
T Consensus 3 ~m~~~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 3 AMNQQPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ----CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 45556799999863 66664 456777777 9 99999864
No 123
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=32.68 E-value=49 Score=29.51 Aligned_cols=42 Identities=5% Similarity=0.043 Sum_probs=30.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCC--CeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~G--heV~Vitp~ 194 (542)
+|||++|... |....|=...++..+++.|.+.| ++|.++-..
T Consensus 1 Mmkilii~~S--~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSS--ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECC--SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeC--CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4799999864 42113556777778888888876 899988653
No 124
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=32.48 E-value=52 Score=30.76 Aligned_cols=46 Identities=17% Similarity=0.238 Sum_probs=29.3
Q ss_pred CCCceEEEEEecccCCCc--CCChHh-HHHhHHHHHHHHCCCeEEEEEecC
Q 009139 148 TRVSYNIVFVTAEAAPYS--KTGGLG-DVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~--~~GGl~-~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
...+|||++|... |.. ..++.. ..+..+.+.+.+.||+|.++-+..
T Consensus 22 ~~~M~kiLiI~gs--p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~~ 70 (218)
T 3rpe_A 22 SNAMSNVLIINAM--KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQ 70 (218)
T ss_dssp --CCCCEEEEECC--CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred cccCcceEEEEeC--CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECCC
Confidence 4457899999865 421 124554 344456666777899999998753
No 125
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=32.31 E-value=40 Score=35.56 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=25.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||++... .|.+| ..|++.|.++||+|++++..
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 789886542 36555 56788899999999999855
No 126
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=32.27 E-value=61 Score=31.13 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=28.3
Q ss_pred ceEEEEEecccCCCcCCCh-HhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GG-l~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||++|... |. .+| ....+..+.+.|.+.||+|.++-..
T Consensus 2 MmkiLiI~gS--pr--~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 2 GRRALIVLAH--SE--RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 5899999865 42 244 4455566677788899999998753
No 127
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=31.94 E-value=51 Score=30.79 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=30.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-GheV~Vitp~ 194 (542)
+|||++|... |. ..|-...++..++++|.+. |++|.++-..
T Consensus 1 MmkIliI~gS--~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 1 MNKIFIYAGV--RN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CCEEEEEECC--CC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CCeEEEEECC--CC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 4799999864 52 2366777788888888887 9999998643
No 128
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=31.80 E-value=49 Score=30.44 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=27.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-GheV~Vitp~ 194 (542)
|||++-.+. +.......+|.+.|.+. |++|.||...
T Consensus 1 ~~IllgvTG-------siaa~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTG-------ATGAPLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECS-------SSCHHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeC-------hHHHHHHHHHHHHHHhccCCEEEEEECc
Confidence 678776531 22334689999999999 9999999854
No 129
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=31.74 E-value=46 Score=30.36 Aligned_cols=42 Identities=17% Similarity=0.081 Sum_probs=28.6
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC--CCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~--GheV~Vitp~ 194 (542)
+|||++|... |....+=....+..+.+.+.+. |++|.++-..
T Consensus 1 MmkiLii~gS--pr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 1 MSRILAVHAS--PRGERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCCEEEEECC--SCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CCEEEEEEeC--CCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5899999864 4211123455666777778777 9999998653
No 130
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=31.70 E-value=72 Score=30.92 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=42.0
Q ss_pred CEEEEEccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEccCChhhhhhhhc
Q 009139 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (542)
Q Consensus 469 ~vIlfVGRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~Gy~~~l~~~~~A 541 (542)
.++++.|-..+..-...+++++... .--.||.|.+.. ..+.+++..++.+ ++. +.+|.++++.++.+
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~vv~G~~~~-~~~~l~~~~~~~~-~v~-v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT---KIISIATSSSNP-NLKKLQKFAKLHN-NIR-LFIDHENIAKLMNE 225 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT---SCEEEEECTTCT-THHHHHHHHHTCS-SEE-EEESCSCHHHHHHT
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC---CCEEEEECCCch-HHHHHHHHHhhCC-CEE-EEeCHHHHHHHHHH
Confidence 4566778766554334455554332 224567788865 4566777666554 564 66999999888765
No 131
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=31.66 E-value=51 Score=30.81 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=29.2
Q ss_pred ceEEEEEecccCCCcCCCh-HhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GG-l~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||++|... | +.++ ....+....++|.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--p--r~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--Q--EPKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--S--CTTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--C--CCCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 3899999865 5 2244 4556666777788889999999754
No 132
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=31.26 E-value=39 Score=32.35 Aligned_cols=33 Identities=30% Similarity=0.339 Sum_probs=23.8
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++... .|++| ..|++.|.++||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGG-------AGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 67765432 36666 56788999999999988643
No 133
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=30.67 E-value=37 Score=32.51 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=27.8
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++++...... ... ......+++++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~-~~~--~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIK--KDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTT--TCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcC--CChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998643221 111 134467999999999999999764
No 134
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.67 E-value=59 Score=30.13 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=28.5
Q ss_pred ceEEEEEecccCCCcCCChH--hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl--~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+.|+.. .||+ .+.+.+|+.+|+++|.+|.+|=..
T Consensus 1 M~~vi~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 1 MARIIVVTSG------KGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp -CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3577777652 3554 567889999999999999999654
No 135
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=30.65 E-value=33 Score=32.13 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=26.2
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCC---CeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG---HRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~G---heV~Vitp~ 194 (542)
...||.++||- ..||++ ..+++.|+++| ++|.++...
T Consensus 18 ~~~~k~vlITG------asggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 18 GSHMNSILITG------CNRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp --CCSEEEESC------CSSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCCCEEEEEC------CCCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 34466677763 247776 67889999999 999988754
No 136
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=30.14 E-value=24 Score=33.14 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=24.4
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
||+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 1 Mk~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTN------VKHFGG---MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESS------TTSTTH---HHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 67777774 247777 5688899999999888754
No 137
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=29.97 E-value=66 Score=29.85 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=27.3
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
++||++-.+. +-...+..+|.+.|.+.|++|.|+...
T Consensus 4 ~k~IllgvTG-------aiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTG-------ASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEECS-------SSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4678775531 224455789999999999999999854
No 138
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.85 E-value=66 Score=27.52 Aligned_cols=34 Identities=32% Similarity=0.435 Sum_probs=24.9
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..|+|+++.. |.++ ..+++.|.+.|++|+++...
T Consensus 18 ~~~~v~IiG~--------G~iG---~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC--------GRLG---SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 4578887752 5555 55677888899999999754
No 139
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=29.77 E-value=36 Score=33.21 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=23.3
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
...|+|++... .|++| ..|++.|.++||+|.++...
T Consensus 17 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 17 RGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ----CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred cCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 45677776432 36665 56788899999999998643
No 140
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=29.71 E-value=45 Score=32.59 Aligned_cols=35 Identities=29% Similarity=0.325 Sum_probs=24.1
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|+|++... .|++| ..|++.|.++|++|+++...
T Consensus 26 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 26 DRKRILITGG-------AGFVG---SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp -CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEcC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3467765432 36655 66788899999999998753
No 141
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.70 E-value=52 Score=31.16 Aligned_cols=34 Identities=32% Similarity=0.421 Sum_probs=25.3
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|+++||- ..||++ ..+++.|+++|++|.++...
T Consensus 21 ~k~~lVTG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTG------GSRGLG---FGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 36777774 247777 57888999999999888643
No 142
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=29.58 E-value=46 Score=31.95 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=24.0
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+|||++|.. |.++ ..++..|++.||+|+++..
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEEC
Confidence 589998863 5555 4567888899999999864
No 143
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=29.51 E-value=44 Score=31.34 Aligned_cols=35 Identities=31% Similarity=0.340 Sum_probs=26.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+||.++||- ..||++ ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTG------as~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITA------GTKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeC------CCchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 567888874 247766 67899999999999988643
No 144
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.40 E-value=46 Score=31.98 Aligned_cols=25 Identities=24% Similarity=0.227 Sum_probs=19.1
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..|++.|.++||+|.++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 36665 66788899999999988643
No 145
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=29.35 E-value=84 Score=29.26 Aligned_cols=40 Identities=15% Similarity=0.152 Sum_probs=26.7
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
+|+|++|+++ | .=....+..+...++++|++|.|++...+
T Consensus 1 m~~vL~v~aH--P----DDe~l~~ggtia~~~~~G~~v~vv~lT~G 40 (227)
T 1uan_A 1 MLDLLVVAPH--P----DDGELGCGGTLARAKAEGLSTGILDLTRG 40 (227)
T ss_dssp CEEEEEEESS--T----THHHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CceEEEEEeC--C----CcHHHhHHHHHHHHHhCCCcEEEEEEcCC
Confidence 5789999976 4 22333344445556678999999986643
No 146
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.21 E-value=1.3e+02 Score=28.48 Aligned_cols=41 Identities=15% Similarity=0.022 Sum_probs=29.3
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.+|||++|... |. +.|-....+..+++.+.+.|++|.++-.
T Consensus 33 ~~mkIliI~GS--~r-~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 33 HRPRILILYGS--LR-TVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp SCCEEEEEECC--CC-SSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEEcc--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 46899999864 42 2244456666678888888999999864
No 147
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=29.19 E-value=64 Score=29.10 Aligned_cols=41 Identities=7% Similarity=0.135 Sum_probs=28.4
Q ss_pred ceEEEEEecccCCC-cCCChHhHHHhHHHHHHHHCC--CeEEEEEe
Q 009139 151 SYNIVFVTAEAAPY-SKTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~-~~~GGl~~~v~~La~~L~~~G--heV~Vitp 193 (542)
+|||++|... |. ...|=....+..+.+.+.+.| ++|.++-.
T Consensus 1 M~kilii~gS--~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAH--PLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECC--SSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEec--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 4799999864 42 113445666677888888877 99999864
No 148
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=28.85 E-value=53 Score=32.05 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=25.0
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|+|+++.. .|++| ..|++.|.++||+|+++...
T Consensus 24 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3567775432 35555 67888899999999999754
No 149
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.85 E-value=35 Score=33.17 Aligned_cols=32 Identities=6% Similarity=0.041 Sum_probs=25.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||+++.. | ....+++++.++|++|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 478998763 3 4578999999999999999765
No 150
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=28.71 E-value=70 Score=30.58 Aligned_cols=42 Identities=21% Similarity=0.379 Sum_probs=30.7
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..+||++.|+.. ...=|-.+.+.+||..|++.|.+|.+|-..
T Consensus 79 ~~~~kvI~vts~----kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSE----APGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356788888852 111244567889999999999999999644
No 151
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=28.52 E-value=79 Score=36.21 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=46.4
Q ss_pred ccCCCCceeeEEEeCCCCCeeeecccccc-ccccccccCCccCcccccCCCceEEEEEecccCCCcCCChHhHHHhHHHH
Q 009139 101 EKDGSGLVIGFHFIPPSGDHEVIDSSKDI-DGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPV 179 (542)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~ 179 (542)
-.|.-|.+|||.-.+...+.......... ...+.... ..+...+.+...++||++++.. -| ..|+-.++..+.+
T Consensus 160 ~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~krIaIlTSG-Gd---aPGmNAaIRaVVr 234 (989)
T 3opy_A 160 TRDPMGDVISFSSYPSLNSKKITSPDFFLHPKKEVRSE-ESIVEQVKSEEGKKKIAIITSG-GD---APGMNAAVRAVTR 234 (989)
T ss_dssp EESSSEEEEECCSSSCC-CCCSCCCCC----------------------CCSEEEEEEECS-SC---CTTHHHHHHHHHH
T ss_pred EecCCCCEEeeecCCCccccCCCchhhhcccccchhhc-ccccccccccccCCEEEEEeeC-CC---chhHHHHHHHHHH
Confidence 45889999999776553322221111101 00000000 1111222223456899999974 23 4789999999999
Q ss_pred HHHHCCCeEEEEE
Q 009139 180 ALAARGHRVMVVS 192 (542)
Q Consensus 180 ~L~~~GheV~Vit 192 (542)
.....|++|.-|.
T Consensus 235 ~a~~~G~~V~Gi~ 247 (989)
T 3opy_A 235 AGIFYGCKVYACY 247 (989)
T ss_dssp HHHHTTEEEEEEC
T ss_pred HHHHCCCEEEEEe
Confidence 8888898777764
No 152
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=28.51 E-value=49 Score=32.86 Aligned_cols=25 Identities=32% Similarity=0.301 Sum_probs=19.4
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..|++.|.++|++|+++...
T Consensus 37 tG~IG---~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 37 TGQDG---SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 36665 66788899999999998754
No 153
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=28.47 E-value=48 Score=32.14 Aligned_cols=24 Identities=25% Similarity=0.355 Sum_probs=18.8
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|++| ..|++.|.++|++|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 36666 5678888999999999864
No 154
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=28.30 E-value=49 Score=31.92 Aligned_cols=24 Identities=29% Similarity=0.349 Sum_probs=18.8
Q ss_pred ChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 168 GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|++| ..|++.|.++||+|.++...
T Consensus 11 G~iG---~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 11 GYIG---SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp SHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 5555 67788899999999998743
No 155
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=28.24 E-value=51 Score=31.19 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=20.7
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..++++++++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56799999999999999854
No 156
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=27.83 E-value=65 Score=32.68 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=28.4
Q ss_pred ceEEEEEecccCCCcCCChHhHH--HhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~--v~~La~~L~~~GheV~Vitp 193 (542)
+|+|++++. .||+|.. ...||.+|+++|.+|.+|..
T Consensus 1 M~~i~~~~g-------kGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLG-------KSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEEC-------SBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 478888774 4888765 57788889999999999976
No 157
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=27.64 E-value=53 Score=31.52 Aligned_cols=27 Identities=15% Similarity=0.316 Sum_probs=19.8
Q ss_pred ChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 168 GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||.+-.=..|++.|.++|++|++++..
T Consensus 9 GatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 9 GGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 333334467788999999999998855
No 158
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=27.55 E-value=52 Score=31.93 Aligned_cols=24 Identities=25% Similarity=0.171 Sum_probs=18.4
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|++| ..|++.|.++||+|.++..
T Consensus 18 tGfIG---~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 18 TGFVA---SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred chHHH---HHHHHHHHHCCCEEEEEEc
Confidence 35555 5678889999999988764
No 159
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=27.44 E-value=67 Score=28.83 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=26.2
Q ss_pred cCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 147 ~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+..++|||++-+.. +|.+ .-..|.+.|.++||+|.=+.+
T Consensus 16 ~~~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~ 54 (169)
T 3ph3_A 16 PRGSHMKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGT 54 (169)
T ss_dssp -----CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCEEEEEeCc-------hHHH-HHHHHHHHHHHCCCEEEEcCC
Confidence 34567999988764 5555 446788889999999987754
No 160
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=27.36 E-value=55 Score=30.93 Aligned_cols=33 Identities=30% Similarity=0.389 Sum_probs=24.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++. .|++| ..|++.|.++||+|++++..
T Consensus 3 ~~~ilVtG--------aG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--------CGDLG---LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--------CSHHH---HHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46777643 15555 56788899999999999754
No 161
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=27.13 E-value=43 Score=27.98 Aligned_cols=38 Identities=5% Similarity=0.072 Sum_probs=28.8
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCC--CeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~G--heV~Vitp 193 (542)
||+++|.....| --...++..+|....++| |+|.|+.-
T Consensus 8 ~K~~ivi~s~d~----~~~~~~al~~A~~a~~~G~~~eV~i~~~ 47 (117)
T 2fb6_A 8 DKLTILWTTDNK----DTVFNMLAMYALNSKNRGWWKHINIILW 47 (117)
T ss_dssp SEEEEEECCCCH----HHHHHTHHHHHHHHHHHTSCSEEEEEEC
T ss_pred CeEEEEEEcCCh----HHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 899998876433 122356889999999999 79999973
No 162
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=26.80 E-value=48 Score=29.99 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=24.6
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++.. .|++| ..+++.|.++|++|+++...
T Consensus 4 m~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 467775432 35555 67788999999999998754
No 163
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=26.55 E-value=62 Score=29.16 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=26.0
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+||++..+. +.......+|.+.|.+.|++|.|+...
T Consensus 6 k~IllgvTG-------s~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLCG-------SVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CEEEEEECS-------SGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CEEEEEEeC-------HHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 578776531 222234678999999999999999865
No 164
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=26.49 E-value=57 Score=32.62 Aligned_cols=37 Identities=22% Similarity=0.378 Sum_probs=28.3
Q ss_pred eEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+.|+.. .||+| +.+.+||.+|+++|.+|.+|=..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 777777642 36666 45678899999999999999654
No 165
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=26.42 E-value=61 Score=31.49 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=25.0
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCC--eEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~Gh--eV~Vitp~ 194 (542)
.++|||++|.. |.++.. ++..|+..|| +|+++...
T Consensus 5 ~~~mkI~IiGa--------G~vG~~---~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 5 VKPTKLAVIGA--------GAVGST---LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp --CCEEEEECC--------SHHHHH---HHHHHHHTTCCSEEEEECSS
T ss_pred CCCCEEEEECC--------CHHHHH---HHHHHHhCCCCCEEEEEeCC
Confidence 45689999863 666654 6778888999 99888643
No 166
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=26.18 E-value=61 Score=31.00 Aligned_cols=36 Identities=31% Similarity=0.424 Sum_probs=26.2
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
.|||+...+ |=-...+..|.++|.+.| +|+|++|..
T Consensus 2 p~ILlTNDD-------Gi~apGi~~L~~~l~~~g-~V~VvAP~~ 37 (251)
T 2wqk_A 2 PTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDR 37 (251)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESS
T ss_pred CEEEEEcCC-------CCCcHHHHHHHHHHHhCC-CEEEEeeCC
Confidence 478766554 222334788999999998 699999975
No 167
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=25.61 E-value=48 Score=31.65 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=26.7
Q ss_pred ceEEEEEecccCCCcCCChHhH---HHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGD---VCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~---~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++.....+ .-+. ....++++|.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 3789988642111 1112 3468999999999999999765
No 168
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=25.51 E-value=57 Score=31.88 Aligned_cols=33 Identities=39% Similarity=0.527 Sum_probs=24.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++.. |.+|. .++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~---~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGT--------GAIGS---FYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESC--------CHHHH---HHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHhCCCeEEEEeCC
Confidence 389999863 77764 4567788899999999754
No 169
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=25.48 E-value=79 Score=30.41 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=28.3
Q ss_pred CceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..|||+.|+ . .||+| +.+.+||.+|+++|.+|.+|=..
T Consensus 39 ~~~~vI~v~-~------KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVY-G------KGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEE-C------STTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 456777776 3 25555 67789999999999999999654
No 170
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.48 E-value=65 Score=29.78 Aligned_cols=34 Identities=35% Similarity=0.637 Sum_probs=25.4
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||+++||- ..||+| ..+++.|+++|++|.++..+
T Consensus 3 ~k~vlVTG------as~GIG---~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTG------AGSGLG---RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 46677774 247777 57788999999999888643
No 171
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=25.34 E-value=42 Score=31.79 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=24.8
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.++|||++... .|++| ..|++.|.++||+|+++...
T Consensus 10 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 10 HHHMKILITGA-------NGQLG---REIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp --CEEEEEEST-------TSHHH---HHHHHHHTTSSEEEEEECTT
T ss_pred cccceEEEECC-------CChHH---HHHHHHHHhCCCeEEeccCc
Confidence 45788886542 35555 66788899999999988643
No 172
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=25.34 E-value=26 Score=36.70 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=25.9
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+.|||+++.. | .+-..|++.|.+.||+|+||=.
T Consensus 2 ~~M~iiI~G~--------G---~vG~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 2 NAMKIIILGA--------G---QVGGTLAENLVGENNDITIVDK 34 (461)
T ss_dssp CCEEEEEECC--------S---HHHHHHHHHTCSTTEEEEEEES
T ss_pred CcCEEEEECC--------C---HHHHHHHHHHHHCCCCEEEEEC
Confidence 5799998652 3 3447899999999999999954
No 173
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.32 E-value=51 Score=31.46 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=24.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+++.. .|++| ..|++.|.++||+|++++..
T Consensus 7 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG-------AGFIG---GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC-------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 456665432 35555 67788899999999999754
No 174
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=25.27 E-value=67 Score=29.57 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=23.6
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||- ..||++ ..+++.|+++|++|.++...
T Consensus 3 k~vlItG------asggiG---~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 3 RVAIVTG------ASSGNG---LAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4556663 247766 56788999999999888643
No 175
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=25.17 E-value=94 Score=28.24 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=26.3
Q ss_pred eEEEEEecccCCCcCCChH-hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl-~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+||++..+ |+. .....+|.+.|.+.|++|.||...
T Consensus 2 k~IllgvT--------Gs~aa~k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCIT--------GASGVIYGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEEC--------SSTTHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 36776553 332 346789999999999999999854
No 176
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=25.14 E-value=1e+02 Score=29.65 Aligned_cols=40 Identities=13% Similarity=0.003 Sum_probs=27.5
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
.++|++|+++ | .=....+..+...++++|++|+|++...+
T Consensus 7 ~~rvLvv~aH--P----DDe~lg~GGtia~~~~~G~~V~vv~~T~G 46 (273)
T 3dff_A 7 ATRLLAISPH--L----DDAVLSFGAGLAQAAQDGANVLVYTVFAG 46 (273)
T ss_dssp -CEEEEEESS--T----THHHHHHHHHHHHHHHTTCEEEEEETTCC
T ss_pred CCCEEEEEeC--C----ChHHHhHHHHHHHHHHCCCcEEEEEEeCC
Confidence 5799999976 4 33333445555667778999999996643
No 177
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=25.12 E-value=1.7e+02 Score=26.39 Aligned_cols=50 Identities=10% Similarity=0.182 Sum_probs=33.2
Q ss_pred CEEEEE-ccCccccCHHHHHHHHHhhhcCCcEEEEEecCchhhH-HHHHHHHHHc
Q 009139 469 PLIGFI-GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFE-SWMRDTEATY 521 (542)
Q Consensus 469 ~vIlfV-GRl~~~KGid~LieA~~~L~~~dv~LVIvG~G~~~~~-~~l~~la~~~ 521 (542)
++|+++ +-+. .+...+.++++.+++.++++.++|-|...+. + |+.+++..
T Consensus 108 riiil~~~~~~--~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~ 159 (192)
T 2x5n_A 108 RIVAFVGSPIV--EDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAA 159 (192)
T ss_dssp EEEEEECSCCS--SCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHH
T ss_pred eEEEEEECCCC--CCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhc
Confidence 445554 5452 3466777888888778999999988765333 4 88888773
No 178
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.09 E-value=64 Score=30.48 Aligned_cols=32 Identities=28% Similarity=0.314 Sum_probs=24.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||++|.. |.++ ..++..|++.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78888753 5555 46788888999999998643
No 179
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=24.91 E-value=1.1e+02 Score=29.21 Aligned_cols=40 Identities=13% Similarity=0.004 Sum_probs=28.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecCC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~~ 196 (542)
.|+|+.|+++ | .=....+..+...++++|++|+|++...+
T Consensus 7 ~~rvLvv~aH--P----DDe~l~~GGtia~~~~~G~~V~vv~~T~G 46 (270)
T 3dfi_A 7 RTRILAISPH--L----DDAVLSVGASLAQAEQDGGKVTVFTVFAG 46 (270)
T ss_dssp CSEEEEEESS--T----THHHHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCEEEEEeC--C----chHHHhhHHHHHHHHhCCCeEEEEEEeCC
Confidence 5799999976 4 33334455555567778999999986644
No 180
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=24.82 E-value=85 Score=28.71 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=27.7
Q ss_pred ceEEEEEecccCCCcCCChH-hHHHhHHHHHHHHC--CCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAAR--GHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl-~~~v~~La~~L~~~--GheV~Vitp~ 194 (542)
+|||++|... |-...++. ...+..+.+.+.+. |++|+++-..
T Consensus 4 M~kiLiI~gS--pr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~ 48 (211)
T 3p0r_A 4 MTKVLFVKAN--NRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLY 48 (211)
T ss_dssp CCEEEEEECC--CSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGG
T ss_pred cCEEEEEEeC--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6899999875 42013453 44555666677766 8999998643
No 181
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=24.71 E-value=44 Score=28.22 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=24.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..+|+++.. | .+-..+++.|.+.|++|+++..+
T Consensus 7 ~~~viIiG~--------G---~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGY--------G---RVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECC--------S---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECc--------C---HHHHHHHHHHHHCCCCEEEEECC
Confidence 456777642 3 34477888999999999999754
No 182
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.60 E-value=71 Score=29.89 Aligned_cols=36 Identities=31% Similarity=0.453 Sum_probs=27.2
Q ss_pred eEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+.|+. .||+| +.+.+||.+|+++|++|.+|=..
T Consensus 1 M~vI~vs~-------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYG-------KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEE-------CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEec-------CCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 67666652 26666 56779999999999999999644
No 183
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=24.60 E-value=49 Score=30.35 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=22.9
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEE
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vit 192 (542)
||.++||- ..||++ ..+++.|+++|++|.++.
T Consensus 1 ~k~vlITG------asggiG---~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITG------ASRGIG---RAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEc
Confidence 45555653 246666 578889999999999884
No 184
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=24.55 E-value=56 Score=32.13 Aligned_cols=25 Identities=32% Similarity=0.340 Sum_probs=18.7
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..+++.|.++|++|+++...
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (372)
T 1db3_A 10 TGQDG---SYLAEFLLEKGYEVHGIKRR 34 (372)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC-
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 36665 66788889999999988643
No 185
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.49 E-value=67 Score=30.58 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=24.6
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 24 ~k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 24 PQTAFVTG------VSSGIG---LAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 36777774 247777 5678899999999988764
No 186
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=24.46 E-value=73 Score=31.76 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=27.2
Q ss_pred cCCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 147 ~~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+..++|||+++.. |. ....+++++.++|++|.++.+.
T Consensus 7 m~~~~~~ili~g~--------g~---~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 7 LRPAATRVMLLGS--------GE---LGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp TSTTCCEEEEESC--------SH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCCEEEEECC--------CH---HHHHHHHHHHHcCCEEEEEECC
Confidence 4456789998752 32 3467889999999999888754
No 187
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=24.39 E-value=58 Score=31.19 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=22.7
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
|||++... .|++| ..+++.|.++||+|.++..
T Consensus 1 m~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGG-------AGFIG---SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeC-------CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 67765432 36666 5678889999999988753
No 188
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=24.34 E-value=76 Score=31.59 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=33.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
.++ +-|++-|.| ++|- ..++..++.++++.|.+|++++|..
T Consensus 166 ~l~-l~ia~a~~~--~vGD-~rva~Sl~~~~~~~G~~v~~~~P~~ 206 (324)
T 1js1_X 166 RPK-VVMTWAPHP--RPLP-QAVPNSFAEWMNATDYEFVITHPEG 206 (324)
T ss_dssp SCE-EEEECCCCS--SCCC-SHHHHHHHHHHHTSSSEEEEECCTT
T ss_pred Cee-EEEEEEccc--ccCC-cchHHHHHHHHHHCCCEEEEeCCcc
Confidence 456 556654455 6788 9999999999999999999999873
No 189
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=24.28 E-value=1.1e+02 Score=29.01 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=33.7
Q ss_pred CCCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 148 ~~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
....||.++|+..- ..-|-..++..|+++|+++|.+|..+-|-
T Consensus 22 ~~~~m~~i~Itgt~----t~vGKT~vt~gL~~~l~~~G~~V~~fKPv 64 (251)
T 3fgn_A 22 FQSHMTILVVTGTG----TGVGKTVVCAALASAARQAGIDVAVCKPV 64 (251)
T ss_dssp CCSSCEEEEEEESS----TTSCHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccCCCEEEEEeCC----CCCcHHHHHHHHHHHHHHCCCeEEEEeee
Confidence 34678999988642 23567778889999999999999999763
No 190
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=24.28 E-value=81 Score=30.01 Aligned_cols=36 Identities=31% Similarity=0.466 Sum_probs=27.0
Q ss_pred eEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|||+.|+. .||+| +.+.+||.+|+++|++|.+|=..
T Consensus 2 MkvIavs~-------KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYG-------KGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEE-------CTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeC-------CCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 67766652 25555 56679999999999999999544
No 191
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.26 E-value=57 Score=30.78 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=25.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 25 ~k~vlITG------as~gIG---~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 25 KRVAFVTG------GMGGLG---AAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHTTTCEEEEEEC
T ss_pred CCEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEcC
Confidence 36777774 247777 5778899999999988863
No 192
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=24.16 E-value=46 Score=28.46 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=19.8
Q ss_pred hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 171 GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 171 ~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+.+-..+++.|.+.|++|+++...
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC
Confidence 445588899999999999999764
No 193
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=24.04 E-value=1.5e+02 Score=29.34 Aligned_cols=72 Identities=17% Similarity=0.010 Sum_probs=43.7
Q ss_pred HHHHHhCCCCCCCCCEE-EEEccCccccC--HHHHHHHHHhhhcCCcEEEEEecCchhhHHHHHHHHHHcCCCEEEEcc
Q 009139 455 ALQKELGLPIRPDCPLI-GFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (542)
Q Consensus 455 ~lr~~lGl~~~~~~~vI-lfVGRl~~~KG--id~LieA~~~L~~~dv~LVIvG~G~~~~~~~l~~la~~~~~~v~~~~G 530 (542)
.+.+++|++ +++++| +..|--.+.|. .+.+.+.+..|.+.+.+++++|...+ .+..+++.+..+.++..+.|
T Consensus 174 ~~l~~~g~~--~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e--~~~~~~i~~~~~~~~~~l~g 248 (349)
T 3tov_A 174 EFYSSHGLT--DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMD--LEMVQPVVEQMETKPIVATG 248 (349)
T ss_dssp HHHHHTTCC--TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTT--HHHHHHHHHTCSSCCEECTT
T ss_pred HHHHHcCCC--CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcch--HHHHHHHHHhcccccEEeeC
Confidence 344566775 245555 44564345665 46888888888766788898875432 44555665555544444444
No 194
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=23.99 E-value=59 Score=30.73 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=25.4
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+.|||.+|... ..| ..|+..|.+.||+|+.+..
T Consensus 5 ~~mkI~IIG~G-----~~G------~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDG-----SST------VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCS-----CCC------SCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeC-----HHH------HHHHHHHHHCCCEEEEecC
Confidence 56999999753 234 5789999999999887753
No 195
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.97 E-value=68 Score=31.16 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=23.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|+|++... .|++| ..|++.|.++|++|+++...
T Consensus 21 ~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGI-------CGQIG---SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCC-------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 466665432 36666 56788888999999998754
No 196
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.88 E-value=50 Score=31.79 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=19.3
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|++| ..++++|.++||+|.+++..
T Consensus 20 tG~iG---~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 20 TGYIG---NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp TSTTH---HHHHHHHHHTTCCEEEEECT
T ss_pred CchHH---HHHHHHHHHCCCcEEEEECC
Confidence 36665 56778899999999998754
No 197
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=23.87 E-value=76 Score=29.45 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=26.3
Q ss_pred ceEEEEEecccCCCcCCChH-hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl-~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+||++..+ ||. .....+|.+.|.+.| +|.||...
T Consensus 19 ~k~IllgvT--------Gsiaa~k~~~ll~~L~~~g-~V~vv~T~ 54 (209)
T 1mvl_A 19 KPRVLLAAS--------GSVAAIKFGNLCHCFTEWA-EVRAVVTK 54 (209)
T ss_dssp CCEEEEEEC--------SSGGGGGHHHHHHHHHTTS-EEEEEECT
T ss_pred CCEEEEEEe--------CcHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 457887664 443 344788999999999 99999865
No 198
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=23.80 E-value=70 Score=30.95 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=22.8
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
|+|++.. ..|++| ..+++.|.++||+|.++..
T Consensus 1 m~vlVTG-------atG~iG---~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVTG-------GSGYIG---SHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-------CCCHHH---HHHHHHHHHCCCEEEEEec
Confidence 6766543 236666 5678889999999998753
No 199
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=23.79 E-value=1.6e+02 Score=24.05 Aligned_cols=41 Identities=7% Similarity=0.010 Sum_probs=28.5
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..++||+++|.. ..|-.......|-+.+.+.|.++.|-...
T Consensus 19 ~~~kkIlvvC~s-----G~gTS~ll~~kl~~~~~~~gi~~~V~~~~ 59 (113)
T 1tvm_A 19 GSKRKIIVACGG-----AVATSTMAAEEIKELCQSHNIPVELIQCR 59 (113)
T ss_dssp CSSEEEEEESCS-----CSSHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ccccEEEEECCC-----CHHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 356899999963 23333335688888899999987766544
No 200
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=23.77 E-value=69 Score=29.35 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=28.4
Q ss_pred CceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHC-CCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAAR-GHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~-GheV~Vitp~ 194 (542)
++|||+.|+.. .||+| +.+.+||.+|+++ |.+|.+|-..
T Consensus 2 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSA------KGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEES------STTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECC------CCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 35677777642 35554 5677899999998 9999999654
No 201
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=23.71 E-value=64 Score=31.29 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=24.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|+|++... .|++| ..|++.|.++||+|.++...
T Consensus 20 ~~~vlVTGa-------sG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 20 HMRILITGG-------AGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 477776542 37766 56788899999999998753
No 202
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=23.46 E-value=88 Score=29.62 Aligned_cols=32 Identities=31% Similarity=0.520 Sum_probs=24.1
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
|+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 23 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTG------ATSGIG---LEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEET------CSSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 5667774 257777 4678899999999988764
No 203
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=23.39 E-value=54 Score=31.51 Aligned_cols=43 Identities=5% Similarity=-0.030 Sum_probs=27.4
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..|||++++....+ ..--.-.....++++|.++||+|..+.+.
T Consensus 2 ~~m~v~vl~gg~s~--e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSS--EKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHH--HHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCc--chHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 36999998721000 00001223568889999999999999765
No 204
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=23.36 E-value=65 Score=32.04 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=23.9
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
..|+|++ | ||.|-.=..|++.|.++||+|+++..
T Consensus 10 ~~~~vlV-T---------G~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 10 HGSRVMV-I---------GGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp --CEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEE-e---------CCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 4577775 3 55555557788999999999999863
No 205
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=23.33 E-value=75 Score=30.02 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=24.7
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 27 gk~vlVTG------as~gIG---~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 27 GRKALVTG------ATGGIG---EAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TCEEEESS------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 36777774 247777 5678999999999988764
No 206
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.22 E-value=66 Score=30.42 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=25.1
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|+++||- ..||+| ..+++.|+++|++|.++...
T Consensus 5 ~k~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTG------ASSGFG---RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46677763 247777 46788999999999888643
No 207
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=23.20 E-value=1e+02 Score=27.15 Aligned_cols=39 Identities=5% Similarity=0.063 Sum_probs=27.9
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHC------CCeEEEEEe
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR------GHRVMVVSP 193 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~------GheV~Vitp 193 (542)
|||++|... |. +.|-...++..+++.+.+. |++|.++-.
T Consensus 1 Mkilii~gS--~r-~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl 45 (191)
T 1t0i_A 1 MKVGIIMGS--VR-AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDL 45 (191)
T ss_dssp CEEEEEECC--CC-SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECH
T ss_pred CeEEEEeCC--CC-CCCchHHHHHHHHHHHHHhhccCCCCceEEEEeh
Confidence 899999864 42 2355666677777777776 799999864
No 208
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.14 E-value=75 Score=29.13 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=24.1
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||- ..||++ ..+++.|+++|++|.++..+
T Consensus 4 k~vlITG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYG------GKGALG---SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEET------TTSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 4556663 247777 57888999999999888644
No 209
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.85 E-value=74 Score=29.01 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=19.2
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.||+| ..+++.|.++|++|.++..
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 14 SRGIG---EATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 46666 6788899999999988864
No 210
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.85 E-value=76 Score=29.73 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=24.3
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||- ..||+| ..+++.|+++|++|.++...
T Consensus 30 k~vlITG------as~gIG---~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTG------ASRGIG---AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESS------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEECC
Confidence 6677763 246766 66788999999998887643
No 211
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=22.82 E-value=73 Score=30.98 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=24.5
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||++|.. |.+|. -++..|+ .|++|+++...
T Consensus 2 ~mkI~IiGa--------Ga~G~---~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGL---LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECC--------CHHHH---HHHHHHh-cCCceEEEECC
Confidence 489999863 77775 4566777 89999999754
No 212
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=22.67 E-value=69 Score=26.68 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=25.8
Q ss_pred CCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 166 KTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 166 ~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|-.+.+...+++.|.+.|++|.++...
T Consensus 8 ~tGnT~~iA~~ia~~l~~~g~~v~~~~~~ 36 (138)
T 5nul_A 8 GTGNTEKMAELIAKGIIESGKDVNTINVS 36 (138)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCCEEEEGG
T ss_pred CCchHHHHHHHHHHHHHHCCCeEEEEEhh
Confidence 36999999999999999999999998654
No 213
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=22.63 E-value=95 Score=30.09 Aligned_cols=42 Identities=19% Similarity=0.361 Sum_probs=30.6
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..++||+.|+.. ...-|-.+...+||..|++.|.+|.+|-..
T Consensus 101 ~~~~kvI~vts~----kgG~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 101 ETENNILMITGA----TPDSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp SCSCCEEEEEES----SSSSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECC----CCCCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 345678877752 112355578889999999999999999654
No 214
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=22.57 E-value=1.1e+02 Score=24.79 Aligned_cols=39 Identities=10% Similarity=0.046 Sum_probs=27.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEecC
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~~ 195 (542)
.|||+++|.. ..|-. ..+..|-+.+.++|+++.|-+...
T Consensus 4 ~mkIlvvC~~-----G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~ 42 (109)
T 2l2q_A 4 SMNILLVCGA-----GMSTS-MLVQRIEKYAKSKNINATIEAIAE 42 (109)
T ss_dssp CEEEEEESSS-----SCSSC-HHHHHHHHHHHHHTCSEEEEEECS
T ss_pred ceEEEEECCC-----hHhHH-HHHHHHHHHHHHCCCCeEEEEecH
Confidence 4999999864 23333 677788888889999887765443
No 215
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=22.51 E-value=63 Score=32.43 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=26.3
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
..+|||++|.. |-++ ..++..|++.||+|+++..+
T Consensus 27 ~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 34689999864 5555 45778889999999998753
No 216
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=22.32 E-value=1.3e+02 Score=28.55 Aligned_cols=44 Identities=23% Similarity=0.193 Sum_probs=27.3
Q ss_pred ceEEEEEecccCC--C---cCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAP--Y---SKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P--~---~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
++||++|.+.+.- + ..+|=-+.=+..-...|.+.|++|++++|.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999775311 0 012222333444456788899999999986
No 217
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=22.12 E-value=61 Score=31.53 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=23.8
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||++|.. |.+|.. ++..|++.||+|++++..
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGLY---YGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHHH---HHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHHCCCeEEEEEcC
Confidence 379999864 666644 567888899999999754
No 218
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=22.03 E-value=57 Score=32.15 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=24.0
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-GheV~Vitp~ 194 (542)
+|||+++.. .|.+| ..|++.|.++ ||+|+++...
T Consensus 24 ~~~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGV-------NGFIG---HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESC-------SSHHH---HHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEECC-------CChHH---HHHHHHHHhCCCCEEEEEeCC
Confidence 467765432 36655 5678888887 9999999754
No 219
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=22.02 E-value=69 Score=31.72 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=19.8
Q ss_pred hHHHhHHHHHHHHCCCeEEEEEec
Q 009139 171 GDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 171 ~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|.+=..+|+++.++|++|++|+..
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cHHHHHHHHHHHHCCCEEEEEecC
Confidence 444577899999999999999864
No 220
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.79 E-value=81 Score=29.07 Aligned_cols=33 Identities=18% Similarity=0.456 Sum_probs=23.8
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|.++||- ..||++ ..+++.|+++|++|.++...
T Consensus 15 k~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 15 KTSLITG------ASSGIG---SAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp CEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEcCC
Confidence 4555663 247776 57888999999999888643
No 221
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=21.77 E-value=46 Score=31.34 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=24.9
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||.++||- ..||+| ..|++.|.++|++|.++...
T Consensus 3 ~k~vlVTG------asg~IG---~~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVTG------AAGQLG---RVMRERLAPMAEILRLADLS 36 (267)
T ss_dssp EEEEEEES------TTSHHH---HHHHHHTGGGEEEEEEEESS
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHhcCCEEEEEecC
Confidence 56666663 247777 45788899999999888744
No 222
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=21.71 E-value=84 Score=29.14 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=24.1
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
|+++||- ..||++ ..+++.|+++|++|.++..
T Consensus 3 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTG------GGHGIG---KQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 5666763 247777 5678999999999988764
No 223
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=21.70 E-value=90 Score=29.37 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=26.8
Q ss_pred CCceEEEEEecccCCCcCCChHhH--HHhHHHHHHHHCCCeEEEEEec
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~--~v~~La~~L~~~GheV~Vitp~ 194 (542)
+..+||++... ||+|. .+.+++..|+++|++|.++...
T Consensus 4 ~g~l~I~~~~k--------gGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 4 RGRLKVFLGAA--------PGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCCEEEEEESS--------TTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CceEEEEEECC--------CCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 44677666542 55554 4568899999999999888654
No 224
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=21.56 E-value=86 Score=30.80 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=25.1
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEE
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vit 192 (542)
.+|||.+|. .||.+ +..+++.|.++|++|++.=
T Consensus 3 ~~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 3 AMKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CCCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEc
Confidence 357887775 48777 3457888899999999874
No 225
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=21.55 E-value=86 Score=30.59 Aligned_cols=34 Identities=26% Similarity=0.197 Sum_probs=24.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|+|++... .|++| ..|++.|.++||+|+++...
T Consensus 9 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTGH-------TGFKG---GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CchHH---HHHHHHHHhCCCeEEEEeCC
Confidence 467765432 36666 56788899999999998754
No 226
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=21.47 E-value=73 Score=31.12 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=24.4
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|+|+++.. .|++| ..++++|.++||+|.+++..
T Consensus 10 ~~~IlVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 10 KGRVLIAGA-------TGFIG---QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp -CCEEEECT-------TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHHCCCCEEEEECC
Confidence 357876543 36666 56777888999999999864
No 227
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.43 E-value=1.1e+02 Score=28.39 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=30.7
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.||.++|+..- ..-|=..++..|+++|+++|.+|..+-|
T Consensus 3 ~mk~i~Itgt~----t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTD----TEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESS----SSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCC----CCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 58888887642 2356667888999999999999999865
No 228
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=21.17 E-value=75 Score=30.81 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=18.9
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.|++| ..|++.|.++||+|.++..
T Consensus 11 tG~iG---~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 11 AGYIG---SHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp TSHHH---HHHHHHHHHTTCCEEEEEC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEec
Confidence 36666 5678889999999999864
No 229
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=21.16 E-value=74 Score=29.52 Aligned_cols=34 Identities=35% Similarity=0.491 Sum_probs=24.9
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+-|.++||- ..||++ ..+++.|+++|++|.+++.
T Consensus 12 ~~k~vlITG------as~giG---~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 12 SQRIAYVTG------GMGGIG---TSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp -CEEEEETT------TTSHHH---HHHHHHHHHTTEEEEEEEC
T ss_pred CCCEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 346666763 247776 6788999999999988873
No 230
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=20.88 E-value=58 Score=31.12 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.3
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|+|+++.. .|++| ..++++|.++|++|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIG---KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCcEEEEECC
Confidence 467776542 36665 56678888999999988754
No 231
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=20.81 E-value=1.1e+02 Score=29.17 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=27.9
Q ss_pred ceEEEEEecccCCCcCCChHh--HHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~--~~v~~La~~L~~~GheV~Vitp~ 194 (542)
+|||+.|+.. .||+| +.+.+|+.+|+++|.+|.+|=..
T Consensus 3 M~kvI~v~s~------KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 3 ETRVIVVGNE------KGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp -CEEEEECCS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 4567766642 36655 57789999999999999998644
No 232
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=20.73 E-value=1.1e+02 Score=28.75 Aligned_cols=41 Identities=17% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 149 ~~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+.+||.++|+..- ..-|-..++..|+++|+++|.+|..+-|
T Consensus 18 ~~m~k~i~ItgT~----t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISATN----TNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEESS----TTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeCC----CCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4567889888641 2345666888999999999999999865
No 233
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.73 E-value=88 Score=30.21 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=24.8
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
..|||.+|.. |-++ ..++..|++.||+|+++..
T Consensus 6 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEEC
Confidence 4589999863 5544 5678889999999998854
No 234
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=20.71 E-value=53 Score=31.71 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=25.2
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.|||++|.. |.+|. .++..|++.|++|+++...
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEec
Confidence 379999863 77775 4567788889999999865
No 235
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=20.60 E-value=78 Score=30.01 Aligned_cols=35 Identities=9% Similarity=0.125 Sum_probs=24.2
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||-- ...+|++ ..+++.|+++|++|.++...
T Consensus 27 k~vlVTGa----sg~~GIG---~~ia~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGL----LSNKSIA---YGIAKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCC----CSTTCHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECC----CCCCCHH---HHHHHHHHHcCCEEEEeeCc
Confidence 67777731 0114566 67889999999999888754
No 236
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=20.56 E-value=77 Score=28.63 Aligned_cols=35 Identities=9% Similarity=-0.059 Sum_probs=25.4
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
||++..+. |.......++.+.|.+.|++|.|+...
T Consensus 4 ~IllgvTG-------s~aa~k~~~l~~~L~~~g~~V~vv~T~ 38 (181)
T 1g63_A 4 KLLICATA-------SINVININHYIVELKQHFDEVNILFSP 38 (181)
T ss_dssp CEEEEECS-------CGGGGGHHHHHHHHTTTSSCEEEEECG
T ss_pred EEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 56665531 233336679999999999999999865
No 237
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=20.55 E-value=75 Score=29.95 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=23.5
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHHC-CCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~-GheV~Vitp~ 194 (542)
|||+++.. .|++|. .+++.|.+. |++|.+++..
T Consensus 1 M~ilVtGa-------tG~iG~---~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGA-------TGHLGT---HITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETT-------TSHHHH---HHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcC-------CchHHH---HHHHHHhhCCCCcEEEEECC
Confidence 78776542 477775 455568887 9999999854
No 238
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.43 E-value=55 Score=27.35 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=18.0
Q ss_pred HHhHHHHHHHHCCCeEEEEEec
Q 009139 173 VCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 173 ~v~~La~~L~~~GheV~Vitp~ 194 (542)
.-..+++.|.++|++|+++..+
T Consensus 17 iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 17 AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHHHCCCeEEEEECC
Confidence 4467889999999999999643
No 239
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=20.37 E-value=86 Score=28.84 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=24.0
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||- ..||++ ..+++.|+++|++|.++..+
T Consensus 8 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVYG------GRGALG---SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 4555663 247777 56788999999999888644
No 240
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.30 E-value=91 Score=30.53 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=24.1
Q ss_pred ceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 151 ~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
+|||++|.. |.++. .++..|++.||+|+++..
T Consensus 4 ~mki~iiG~--------G~~G~---~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGL--------GNGGH---AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECC--------CHHHH---HHHHHHHhCCCEEEEEeC
Confidence 489998863 66664 467788889999988864
No 241
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.28 E-value=75 Score=28.92 Aligned_cols=25 Identities=48% Similarity=0.727 Sum_probs=19.7
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.||++ ..+++.|+++|++|.++...
T Consensus 11 sggiG---~~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 11 ASGLG---RAAALALKARGYRVVVLDLR 35 (242)
T ss_dssp TSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEccC
Confidence 47766 56788899999999988643
No 242
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.28 E-value=1e+02 Score=29.73 Aligned_cols=41 Identities=22% Similarity=0.428 Sum_probs=29.9
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.++||+.|+.. ...-|-.+...+||..|++.|.+|.+|-..
T Consensus 90 ~~~kvI~vts~----kgG~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 90 AQNNVLMMTGV----SPSIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTCCEEEEEES----SSSSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 45677777752 112355677789999999999999999654
No 243
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.27 E-value=1e+02 Score=29.02 Aligned_cols=33 Identities=30% Similarity=0.444 Sum_probs=25.4
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|+++||- ..||++ ..+++.|+++|++|.++...
T Consensus 11 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTG------GARGQG---RSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeC------CCChHH---HHHHHHHHHCCCeEEEEccc
Confidence 6777774 247777 57889999999999888644
No 244
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=20.24 E-value=1.2e+02 Score=30.11 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=24.6
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
.+|+|++... .|++| ..|++.|.++||+|+++...
T Consensus 28 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGA-------GGFIA---SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEECC-------ccHHH---HHHHHHHHHCCCeEEEEECC
Confidence 4567765432 36665 66778888999999998754
No 245
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=20.22 E-value=83 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=24.4
Q ss_pred eEEEEEecccCCCcCCChHhHHHhHHHHHHHH-CCCeEEEEEec
Q 009139 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (542)
Q Consensus 152 MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~-~GheV~Vitp~ 194 (542)
+|.++||- ..||++ ..+++.|++ +|++|.++...
T Consensus 4 ~k~vlITG------asggIG---~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTG------GNKGIG---LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESS------CSSHHH---HHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeC------CCcHHH---HHHHHHHHHhcCCeEEEEeCC
Confidence 45566663 247776 567889999 99999888743
No 246
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=20.15 E-value=69 Score=30.13 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=17.8
Q ss_pred HHhHHHHHHHHCCCeEEEEEec
Q 009139 173 VCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 173 ~v~~La~~L~~~GheV~Vitp~ 194 (542)
.=..|++.|.++||+|++++..
T Consensus 16 iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 16 TARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp HHHHHHHHHGGGTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEEcC
Confidence 3367788999999999999754
No 247
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=20.11 E-value=95 Score=28.50 Aligned_cols=33 Identities=36% Similarity=0.542 Sum_probs=23.8
Q ss_pred EEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEec
Q 009139 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (542)
Q Consensus 153 kIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp~ 194 (542)
|.++||- ..||++ ..+++.|+++|++|.++..+
T Consensus 3 k~vlVTG------as~giG---~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTG------GSRGIG---RAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4555663 247777 56888999999999888643
No 248
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=20.04 E-value=91 Score=28.77 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=25.6
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHH-CCCeEEEEEec
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~-~GheV~Vitp~ 194 (542)
..+||++..+. +.......+|.+.|.+ .|++|.||...
T Consensus 18 ~~k~IllgvTG-------siaa~k~~~lv~~L~~~~g~~V~vv~T~ 56 (206)
T 1qzu_A 18 RKFHVLVGVTG-------SVAALKLPLLVSKLLDIPGLEVAVVTTE 56 (206)
T ss_dssp SSEEEEEEECS-------SGGGGTHHHHHHHHC---CEEEEEEECT
T ss_pred CCCEEEEEEeC-------hHHHHHHHHHHHHHhcccCCEEEEEECH
Confidence 34678876642 2233446789999999 89999999865
No 249
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=20.03 E-value=71 Score=31.03 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=21.5
Q ss_pred CceEEEEEecccCCCcCCChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 150 ~~MkIl~Vt~e~~P~~~~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.+|||++... .|++| ..|++.|.++|+++.|++.
T Consensus 23 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~~v~~~ 56 (346)
T 4egb_A 23 NAMNILVTGG-------AGFIG---SNFVHYMLQSYETYKIINF 56 (346)
T ss_dssp -CEEEEEETT-------TSHHH---HHHHHHHHHHCTTEEEEEE
T ss_pred CCCeEEEECC-------ccHHH---HHHHHHHHhhCCCcEEEEE
Confidence 4577775432 35555 6778889999966555553
No 250
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.02 E-value=81 Score=29.63 Aligned_cols=24 Identities=38% Similarity=0.527 Sum_probs=20.0
Q ss_pred CChHhHHHhHHHHHHHHCCCeEEEEEe
Q 009139 167 TGGLGDVCGSLPVALAARGHRVMVVSP 193 (542)
Q Consensus 167 ~GGl~~~v~~La~~L~~~GheV~Vitp 193 (542)
.||+| ..++++|+++|++|+++..
T Consensus 33 Sg~iG---~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMG---FAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEEC
Confidence 47777 6788999999999999864
Done!