BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009140
(542 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24606|EIN3_ARATH Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1
SV=1
Length = 628
Score = 626 bits (1614), Expect = e-178, Method: Compositional matrix adjust.
Identities = 324/512 (63%), Positives = 390/512 (76%), Gaps = 25/512 (4%)
Query: 3 IFEEMGFCGNLEFFSSPHGEGEAFL---EHEQETAAEEDYSDEEMDVDELERRMWRDRML 59
+F EMG CGN++FFSS F + E ++ E+DY+D+E+DVDELERRMWRD+M
Sbjct: 2 MFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMR 61
Query: 60 LKKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 119
LK+LKEQ K KE VD+AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP
Sbjct: 62 LKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 121
Query: 120 EKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQEL 179
E GKPV+GASDNLR WWK+KVRFDRNGPAAI KYQA++ I G +E + TPH+LQEL
Sbjct: 122 ENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQEL 181
Query: 180 QDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPH 239
QDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWPNG E+WWPQLGLPKD GP PYKKPH
Sbjct: 182 QDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPH 241
Query: 240 DLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRK 299
DLKKAWKV VLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEE+L+R+
Sbjct: 242 DLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARE 301
Query: 300 LYPDSCPPVS-AGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDV-NLFNMGAMGRDR 357
LYP+SCPP+S +GGS S +++D S YDVEG E + + EVEE+KP V N N G + +
Sbjct: 302 LYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKPEKVMNSSNFGMVAK-- 359
Query: 358 LMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLE 417
M P +K E+ NS+F++KRK P + +MD+ ++TCE C + + GFL+
Sbjct: 360 -MHDFP----VKEEVPAGNSEFMRKRK-PNRDLNTIMDRTVFTCENLGCAHSEISRGFLD 413
Query: 418 RSSRNNHQLNCPYRHNSSQGFGMPN-FQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQ 476
R+SR+NHQL CP+R + P+ F VN + V G P QP+P N
Sbjct: 414 RNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVV-----GFP-QPRPV----NSVAQP 463
Query: 477 FNISGLELPDDGQKMITDLMSFYDTNHQQNKS 508
+++G+ +P+DGQKMI++LMS YD N Q N++
Sbjct: 464 IDLTGI-VPEDGQKMISELMSMYDRNVQSNQT 494
>sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana
GN=EIL1 PE=1 SV=1
Length = 584
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 335/539 (62%), Positives = 400/539 (74%), Gaps = 39/539 (7%)
Query: 1 MGIFEEMGFCGNLEFFSSPHGEGEAFL-EHEQETAAEE-DYSDEEMDVDELERRMWRDRM 58
M +F EMG GN++FFSS L + EQE E+ DY+D+EMDVDELE+RMWRD+M
Sbjct: 1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKM 60
Query: 59 LLKKLKEQ-SKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 117
LK+LKEQ SK KE VD +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI
Sbjct: 61 RLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 120
Query: 118 IPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVS-TPHSL 176
IPEKGKPV+GASDNLR WWK+KVRFDRNGPAAIAKYQ+++ I G + DC S+V TPH+L
Sbjct: 121 IPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTL 180
Query: 177 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYK 236
QELQDTTLGSLLSALMQHCDPPQRRFPLEKGV+PPWWPNGNEEWWPQLGLP + GPPPYK
Sbjct: 181 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYK 240
Query: 237 KPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEAL 296
KPHDLKKAWKV VLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEE +
Sbjct: 241 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVV 300
Query: 297 SRKLYPDSCPP---VSAGGSGSFIISDSSDYDVEGVEDDRN-VEVEEIKPRDVNLFNMGA 352
+R+LYP+SCPP S+ GSGS +I+D S+YDVEG E +++ +VEE KP V + + +
Sbjct: 301 ARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHGFDVEERKPEIVMMHPLAS 360
Query: 353 MGRDRLMMTPPMVPQIKGELVET-NSDFIQKRKQPADQSHLMMDQKI-YTCEFPQCPYGD 410
G ++ P IK E+ T N +F +KRKQ D + ++MD+ YTCE QCP+
Sbjct: 361 FGVAKMQHFP-----IKEEVATTVNLEFTRKRKQNNDMNVMVMDRSAGYTCENGQCPHSK 415
Query: 411 YRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPK 470
LGF +RSSR+NHQ+ CPYR N +G F + + V QP QP
Sbjct: 416 MNLGFQDRSSRDNHQMVCPYRDNRL-AYGASKFHMGGMKLVVPQ----QPVQP------- 463
Query: 471 NQTQSQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSL------NSGNLNAIGDQNQQ 523
++SG+ +P++GQKMIT+LM+ YD N Q N++ S ++A QNQQ
Sbjct: 464 ------IDLSGVGVPENGQKMITELMAMYDRNVQSNQTPPTLMENQSMVIDAKAAQNQQ 516
>sp|O23116|EIL3_ARATH ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana
GN=EIL3 PE=1 SV=1
Length = 567
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/317 (60%), Positives = 238/317 (75%), Gaps = 28/317 (8%)
Query: 32 ETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSKSKECVDSAKQ--RQSQEQARRKK 89
+ AE D SDEE+D D+LERRMW+DR+ LK++KE+ K+ K+ ++ +QA+RKK
Sbjct: 23 DNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKK 82
Query: 90 MSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAA 149
MSRAQDGILKYMLK+MEVCK +GFVYGIIPEKGKPVSG+SDN+RAWWKEKV+FD+NGPAA
Sbjct: 83 MSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAA 142
Query: 150 IAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVA 209
IAKY+ + GK++ ++ LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG
Sbjct: 143 IAKYEEECLAFGKSD---GNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTP 199
Query: 210 PPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVR 269
PPWWP GNEEWW +LGLPK PPY+KPHDLKK WKV VLTAVI HM PDIAKI++ VR
Sbjct: 200 PPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVR 258
Query: 270 QSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSF------------- 316
QSKCLQDKMTAKESA WLAV+NQEE+L ++ P S G+ +
Sbjct: 259 QSKCLQDKMTAKESAIWLAVLNQEESLIQQ-------PSSDNGNSNVTETHRRGNNADRR 311
Query: 317 --IISDSSDYDVEGVED 331
+++ SDYDV+G E+
Sbjct: 312 KPVVNSDSDYDVDGTEE 328
>sp|Q9FJQ5|EIL5_ARATH ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana
GN=EIL5 PE=2 SV=1
Length = 557
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/453 (43%), Positives = 256/453 (56%), Gaps = 72/453 (15%)
Query: 42 EEMDVDELERRMWRDRMLLKKLKEQSKSKECVDSAKQR---------------QSQEQAR 86
EE+ D+L++RMW+DR L+ KLK+Q + + + E +R
Sbjct: 33 EEISYDDLKKRMWKDRNLMCKLKQQKRDNLNSVISSPSSSTSASSSSSSSVIVRRTEASR 92
Query: 87 RKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNG 146
RKKM+R+QD +LKYM+K+MEVCKAQGFVYGI+PEKGKPV+G+SD+LR WWKE V+FD+
Sbjct: 93 RKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTA 152
Query: 147 PAAIAKY--QADHAILGKNE--DCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRF 202
P A++ Y A ++ NE D S + H L ELQDTTLGSLLSALMQHC PPQRRF
Sbjct: 153 PNAVSDYLTLAAAQLISSNESLDPNSYI---HMLHELQDTTLGSLLSALMQHCVPPQRRF 209
Query: 203 PLEKGVAPPWWPNGNEEWWPQLGLPK-DLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDI 261
PLEKG+APPWWPNG E WW + G + GPPPY+KPHDL+KAWKVSVL AVIKHM P++
Sbjct: 210 PLEKGLAPPWWPNGTELWWGEQGAAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNL 269
Query: 262 AKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPD--------------SCPP 307
++R+L RQSKCLQDKM AKE+ TW V+NQEEA +L +C
Sbjct: 270 ERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLNRLKISDDEDEDRDQEQARFTCFD 329
Query: 308 VSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMGRDR---------- 357
+ FI+ + + + D+ V+ +E D L R
Sbjct: 330 QEPSLNTCFIVGQDQE-PLGSMRKDKRVD-QEFSSNDCFLVAQDQEPRKGKKADQEWSPN 387
Query: 358 ---LMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLG 414
L+ P+ + KGE VE + M +YTC+ CP D LG
Sbjct: 388 SCFLVDQEPLGNKRKGEFVEKEA----------------MLSNVYTCQNSSCPSSDVSLG 431
Query: 415 FLERSSRNNHQLNCPYRH----NSSQGFGMPNF 443
F++++ R H++ C Y N S G G F
Sbjct: 432 FVDKNLRTGHEIECLYGTPELVNQSSGGGSDGF 464
>sp|O23115|EIL2_ARATH ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana
GN=EIL2 PE=1 SV=1
Length = 518
Score = 335 bits (859), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/464 (45%), Positives = 272/464 (58%), Gaps = 59/464 (12%)
Query: 1 MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQETAAEEDYS-DEEMDVDELERRMWRDRML 59
+G+F + C + F+ H + + TA +D S DEEM+++ELE+++WRD+
Sbjct: 8 IGMFRSL-VCSSAPPFTEGH------MCSDSHTALCDDLSSDEEMEIEELEKKIWRDKQR 60
Query: 60 LKKLKEQSKSKECVDSAKQRQSQ---EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYG 116
LK+LKE +K+ ++Q E + ++ M +AQDGILKYM K ME KAQGFVYG
Sbjct: 61 LKRLKEMAKNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYG 120
Query: 117 IIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVV--STPH 174
I+ E GK V+G+SDNLR WWK+KVRFDRNGPAAI K+Q D L D GS V ST
Sbjct: 121 IVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRD-INLSDGSDSGSEVGDSTAQ 179
Query: 175 SLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLG--P 232
L ELQDTTLG+LLSAL HC+PPQRRFPLEKGV PPWWP G E+WW QL LP D P
Sbjct: 180 KLLELQDTTLGALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKEDWWDQLSLPVDFRGVP 239
Query: 233 PPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQ 292
PPYKKPHDLKK WK+ VL VI+HM DI+ I LVR+S+ LQ+KMT++E A WLA + +
Sbjct: 240 PPYKKPHDLKKLWKIGVLIGVIRHMASDISNIPNLVRRSRSLQEKMTSREGALWLAALYR 299
Query: 293 EEAL------SRKLYPDSCPPVSA-GGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDV 345
E+A+ SR+ S V A GG + +S+DYDVE +
Sbjct: 300 EKAIVDQIAMSRENNNTSNFLVPATGGDPDVLFPESTDYDVELI---------------- 343
Query: 346 NLFNMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQ 405
G R T P+ E N + + KRK D + M + TCE
Sbjct: 344 -----GGTHR-----TNQQYPEF-----ENNYNCVYKRKFEEDFG-MPMHPTLLTCENSL 387
Query: 406 CPYGDYRLGFLERSSRNNHQLNCPYRHNS----SQGFGMPNFQV 445
CPY +GFL+R+ R NHQ+ CPY+ S ++ +GM V
Sbjct: 388 CPYSQPHMGFLDRNLRENHQMTCPYKVTSFYQPTKPYGMTGLMV 431
>sp|Q9LX16|EIL4_ARATH Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis
thaliana GN=EIL4 PE=3 SV=1
Length = 471
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 161/263 (61%), Positives = 199/263 (75%), Gaps = 5/263 (1%)
Query: 38 DYSDEEMDVDELERRMWRDRMLL-KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDG 96
D +EE+ D+L+RRMW+DR L+ KKLK+Q + V S ++ E +RRKKM+R+QD
Sbjct: 14 DDEEEEISYDDLKRRMWKDRNLMEKKLKQQKRHSNDVVSFTTHRA-EASRRKKMARSQDS 72
Query: 97 ILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQAD 156
+LKYM+K+MEVCKA+GFVYGI+PEKGKP++G+SD+LR WWKE V+FD+N P AI Y A
Sbjct: 73 VLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLAL 132
Query: 157 HAILGKNEDCGSVVSTP---HSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWW 213
A E S+ H LQELQDTTLGSLLSALMQHC PPQRRFPLEKG+APPWW
Sbjct: 133 AAAAAAAELIDKSSSSSSLLHMLQELQDTTLGSLLSALMQHCMPPQRRFPLEKGIAPPWW 192
Query: 214 PNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKC 273
P G E WW + G + G PPY+KPHDL+K+WKVSVL AVIKHM P++ ++R+L RQSK
Sbjct: 193 PTGTELWWGEQGAAHEHGAPPYRKPHDLRKSWKVSVLAAVIKHMSPNLGRVRRLARQSKS 252
Query: 274 LQDKMTAKESATWLAVINQEEAL 296
LQDKM AKE+ TW V+NQEEAL
Sbjct: 253 LQDKMMAKETDTWSRVLNQEEAL 275
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 396 QKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHN 433
+ +YTC+ CP D GF +++SR H++ C Y N
Sbjct: 306 KSVYTCQNSSCPKSDVSFGFGDKNSRTGHEIQCLYGSN 343
>sp|Q8PHQ4|CLPB_XANAC Chaperone protein ClpB OS=Xanthomonas axonopodis pv. citri (strain
306) GN=clpB PE=3 SV=2
Length = 861
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 26 FLEHEQETAAEEDYSDEEMDVDELERRMWRDRMLLKK----LKEQSKSKECVDSAKQRQS 81
L+ E++ A+ + +D E D+D+LER + L K L+ +K KE ++ AK
Sbjct: 428 MLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELE 487
Query: 82 QEQARR--KKMSRAQDGILKYMLKMMEVC 108
Q R+ KMS Q G+L + K M +
Sbjct: 488 AAQRRQDYAKMSEIQYGVLPQLEKQMALA 516
>sp|Q9P903|DPYS_LACK1 Dihydropyrimidinase OS=Lachancea kluyveri (strain ATCC 58438 / CBS
3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 /
NRRL Y-12651) GN=PYD2 PE=1 SV=1
Length = 542
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 96 GILKYMLKMMEV-CKAQGFVYGIIPEKGKPVSGASD-NLRAWWKEKVRFDRN 145
G L M+K++E+ C VYG+ P+KG + G SD +L W+ + + + N
Sbjct: 412 GNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYN 463
>sp|Q820S1|PTA_NITEU Phosphate acetyltransferase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=pta PE=3 SV=1
Length = 695
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 32 ETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSKSKECVDSAKQRQSQEQARRKKMS 91
+TAA + E+ +D+ ER + ++++ K C + +QR S R + +
Sbjct: 320 DTAANLHRMNREIPLDDHERAERITNFVANHIRQELLVKRCGEPQEQRLSPPAFRYRLVK 379
Query: 92 RAQDGILKYML---------KMMEVCKAQGFVYGII---PEKGKPVSGAS-----DNLRA 134
RAQ+ + +L + +C+ +G ++ P+ K V+ A + L
Sbjct: 380 RAQEADCRIVLPEGYEPRTIQAATICQERGIARCVLLAKPDAVKAVASARGITLPEGLEM 439
Query: 135 WWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQD-TTLGSLLSA 190
EKVR RN AA+ + + G NE P +L +L+D LG+++ A
Sbjct: 440 IDPEKVR--RNYVAAMVELRKHK---GLNE--------PMALAQLEDNVVLGTMMLA 483
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2
Length = 1324
Score = 32.3 bits (72), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 282 ESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSFIISD---SSDYDVEGVEDDRNVEVE 338
+S W+ + +E +L + P+ + S + + D ++D+D+EG DD + EVE
Sbjct: 969 KSPDWIKTLEEEMSLEKI-----NVPLPSSTSSTLLGEDAEVTADFDMEGDVDDYSAEVE 1023
Query: 339 EIKPRDVNLFNMGAMGRDRLMMTPPM 364
EI P+ + + A+ R ++ P+
Sbjct: 1024 EILPQHLQPSSSSALARPPVLHPGPV 1049
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,724,179
Number of Sequences: 539616
Number of extensions: 9780867
Number of successful extensions: 35973
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 35548
Number of HSP's gapped (non-prelim): 459
length of query: 542
length of database: 191,569,459
effective HSP length: 122
effective length of query: 420
effective length of database: 125,736,307
effective search space: 52809248940
effective search space used: 52809248940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)